locus-tag class description THII_0001 IPR041546 ClpA/ClpB, AAA lid domain THII_0001 IPR036628 Clp, N-terminal domain superfamily THII_0001 IPR004176 Clp, N-terminal THII_0001 IPR001270 ClpA/B family THII_0001 IPR018368 ClpA/B, conserved site 1 THII_0001 IPR028299 ClpA/B, conserved site 2 THII_0001 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0001 IPR003959 ATPase, AAA-type, core THII_0001 IPR003593 AAA+ ATPase domain THII_0001 IPR019489 Clp ATPase, C-terminal THII_0001 IPR017730 Chaperonin ClpB THII_0012 IPR016039 Thiolase-like THII_0012 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_0012 IPR018201 Beta-ketoacyl synthase, active site THII_0012 IPR014031 Beta-ketoacyl synthase, C-terminal THII_0012 IPR014043 Acyl transferase THII_0012 IPR014030 Beta-ketoacyl synthase, N-terminal THII_0012 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding THII_0012 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_0012 IPR041618 Polyketide synthase dimerisation element domain THII_0012 IPR013968 Polyketide synthase, ketoreductase domain THII_0012 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THII_0012 IPR032821 Ketoacyl-synthetase, C-terminal extension THII_0012 IPR029058 Alpha/Beta hydrolase fold THII_0012 IPR036736 ACP-like superfamily THII_0012 IPR001031 Thioesterase THII_0012 IPR006162 Phosphopantetheine attachment site THII_0012 IPR001227 Acyl transferase domain superfamily THII_0012 IPR009081 Phosphopantetheine binding ACP domain THII_0012 IPR036291 NAD(P)-binding domain superfamily THII_0012 IPR020802 Polyketide synthase, thioesterase domain THII_0012 IPR036299 Polyketide synthase, docking domain superfmaily THII_0012 IPR015083 Polyketide synthase, docking domain THII_0015 IPR010106 Recombination-promoting nuclease RpnA THII_0015 IPR006842 Transposase (putative), YhgA-like THII_0018 IPR007484 Peptidase M28 THII_0019 IPR000462 CDP-alcohol phosphatidyltransferase THII_0020 IPR000374 Phosphatidate cytidylyltransferase THII_0026 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0026 IPR006311 Twin-arginine translocation pathway, signal sequence THII_0026 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0027 IPR006657 Molybdopterin dinucleotide-binding domain THII_0027 IPR006656 Molybdopterin oxidoreductase THII_0027 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain THII_0027 IPR009010 Aspartate decarboxylase-like domain superfamily THII_0028 IPR001173 Glycosyltransferase 2-like THII_0028 IPR029044 Nucleotide-diphospho-sugar transferases THII_0029 IPR006195 Aminoacyl-tRNA synthetase, class II THII_0029 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit THII_0029 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial THII_0029 IPR002319 Phenylalanyl-tRNA synthetase THII_0029 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm THII_0029 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal THII_0031 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THII_0031 IPR003099 Prephenate dehydrogenase THII_0031 IPR036291 NAD(P)-binding domain superfamily THII_0032 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site THII_0032 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase THII_0032 IPR036968 Enolpyruvate transferase domain superfamily THII_0032 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta THII_0032 IPR001986 Enolpyruvate transferase domain THII_0034 IPR003136 Cytidylate kinase THII_0034 IPR011994 Cytidylate kinase domain THII_0034 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0035 IPR022967 RNA-binding domain, S1 THII_0035 IPR003029 S1 domain THII_0035 IPR012340 Nucleic acid-binding, OB-fold THII_0035 IPR000110 Ribosomal protein S1 THII_0036 IPR000119 Histone-like DNA-binding protein THII_0036 IPR020816 Histone-like DNA-binding protein, conserved site THII_0036 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily THII_0036 IPR005685 Integration host factor, beta subunit THII_0037 IPR013026 Tetratricopeptide repeat-containing domain THII_0037 IPR030865 Lipopolysaccharide assembly protein B THII_0037 IPR011990 Tetratricopeptide-like helical domain superfamily THII_0037 IPR019734 Tetratricopeptide repeat THII_0037 IPR041166 LapB, rubredoxin metal binding domain THII_0038 IPR014732 Orotidine 5'-phosphate decarboxylase THII_0038 IPR018089 Orotidine 5'-phosphate decarboxylase, active site THII_0038 IPR011060 Ribulose-phosphate binding barrel THII_0038 IPR001754 Orotidine 5'-phosphate decarboxylase domain THII_0038 IPR013785 Aldolase-type TIM barrel THII_0039 IPR036412 HAD-like superfamily THII_0039 IPR006439 HAD hydrolase, subfamily IA THII_0039 IPR023214 HAD superfamily THII_0039 IPR041492 Haloacid dehalogenase-like hydrolase THII_0041 IPR011130 SecA, preprotein cross-linking domain THII_0041 IPR011116 SecA Wing/Scaffold THII_0041 IPR020937 SecA conserved site THII_0041 IPR011115 SecA DEAD-like, N-terminal THII_0041 IPR036266 SecA, Wing/Scaffold superfamily THII_0041 IPR004027 SEC-C motif THII_0041 IPR014018 SecA motor DEAD THII_0041 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0041 IPR000185 Protein translocase subunit SecA THII_0041 IPR036670 SecA, preprotein cross-linking domain superfamily THII_0047 IPR035985 Ubiquitin-activating enzyme THII_0047 IPR000594 THIF-type NAD/FAD binding fold THII_0048 IPR018228 Deoxyribonuclease, TatD-related, conserved site THII_0048 IPR001130 TatD family THII_0048 IPR032466 Metal-dependent hydrolase THII_0048 IPR015991 Uncharacterised hydrolase TatD-type THII_0049 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THII_0049 IPR010129 Type I secretion membrane fusion protein, HlyD family THII_0050 IPR000014 PAS domain THII_0050 IPR035965 PAS domain superfamily THII_0050 IPR013656 PAS fold-4 THII_0050 IPR029787 Nucleotide cyclase THII_0050 IPR035919 EAL domain superfamily THII_0050 IPR001633 EAL domain THII_0050 IPR000160 GGDEF domain THII_0054 IPR036291 NAD(P)-binding domain superfamily THII_0054 IPR001509 NAD-dependent epimerase/dehydratase THII_0055 IPR001296 Glycosyl transferase, family 1 THII_0057 IPR003425 CCB3/YggT THII_0058 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain THII_0058 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THII_0058 IPR036291 NAD(P)-binding domain superfamily THII_0058 IPR000304 Pyrroline-5-carboxylate reductase THII_0058 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal THII_0061 IPR039420 Transcriptional regulatory protein WalR-like THII_0061 IPR001789 Signal transduction response regulator, receiver domain THII_0061 IPR016032 Signal transduction response regulator, C-terminal effector THII_0061 IPR001867 OmpR/PhoB-type DNA-binding domain THII_0061 IPR011006 CheY-like superfamily THII_0061 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0062 IPR002641 Patatin-like phospholipase domain THII_0062 IPR001423 Lysophospholipase patatin, conserved site THII_0062 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_0065 IPR013766 Thioredoxin domain THII_0065 IPR011990 Tetratricopeptide-like helical domain superfamily THII_0065 IPR036249 Thioredoxin-like superfamily THII_0067 IPR036397 Ribonuclease H superfamily THII_0067 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_0067 IPR005987 Ribonuclease T THII_0067 IPR012337 Ribonuclease H-like superfamily THII_0068 IPR006680 Amidohydrolase-related THII_0068 IPR032466 Metal-dependent hydrolase THII_0068 IPR002195 Dihydroorotase, conserved site THII_0068 IPR004721 Dihydroorotase homodimeric type THII_0070 IPR003594 Histidine kinase/HSP90-like ATPase THII_0070 IPR029151 Periplasmic sensor-like domain superfamily THII_0070 IPR035965 PAS domain superfamily THII_0070 IPR015387 LuxQ, periplasmic THII_0070 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0070 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0070 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0070 IPR001789 Signal transduction response regulator, receiver domain THII_0070 IPR005467 Histidine kinase domain THII_0070 IPR011006 CheY-like superfamily THII_0070 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0071 IPR013686 Polypeptide-transport-associated, ShlB-type THII_0071 IPR034746 POTRA domain THII_0071 IPR005565 Haemolysin activator HlyB, C-terminal THII_0071 IPR035251 ShlB, POTRA domain THII_0071 IPR027282 Two partner secretion pathway transporter THII_0075 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE THII_0075 IPR013766 Thioredoxin domain THII_0075 IPR036249 Thioredoxin-like superfamily THII_0075 IPR017937 Thioredoxin, conserved site THII_0075 IPR013740 Redoxin THII_0076 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising THII_0076 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site THII_0076 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal THII_0076 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal THII_0079 IPR038717 Tc1-like transposase, DDE domain THII_0090 IPR036291 NAD(P)-binding domain superfamily THII_0090 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase THII_0090 IPR001509 NAD-dependent epimerase/dehydratase THII_0091 IPR004821 Cytidyltransferase-like domain THII_0091 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site THII_0091 IPR023030 Bifunctional protein HldE THII_0091 IPR029056 Ribokinase-like THII_0091 IPR011913 RfaE bifunctional protein, domain I THII_0091 IPR011914 RfaE bifunctional protein, domain II THII_0091 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0091 IPR011611 Carbohydrate kinase PfkB THII_0093 IPR014524 Outer membrane protein assembly factor BamC THII_0093 IPR010653 NlpB/DapX lipoprotein THII_0093 IPR042268 Outer membrane protein assembly factor BamC, C-terminal THII_0095 IPR013785 Aldolase-type TIM barrel THII_0095 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA THII_0095 IPR002220 DapA-like THII_0095 IPR020625 Schiff base-forming aldolase, active site THII_0095 IPR020624 Schiff base-forming aldolase, conserved site THII_0101 IPR018085 Uracil-DNA glycosylase, active site THII_0101 IPR002043 Uracil-DNA glycosylase family 1 THII_0101 IPR036895 Uracil-DNA glycosylase-like domain superfamily THII_0101 IPR005122 Uracil-DNA glycosylase-like THII_0102 IPR034505 Anaerobic coproporphyrinogen-III oxidase THII_0102 IPR010723 HemN, C-terminal THII_0102 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN THII_0102 IPR007197 Radical SAM THII_0102 IPR023404 Radical SAM, alpha/beta horseshoe THII_0102 IPR006638 Elp3/MiaB/NifB THII_0104 IPR033939 Branched-chain aminotransferase THII_0104 IPR005785 Branched-chain amino acid aminotransferase I THII_0104 IPR018300 Aminotransferase, class IV, conserved site THII_0104 IPR001544 Aminotransferase class IV THII_0104 IPR036038 Aminotransferase-like, PLP-dependent enzymes THII_0106 IPR011910 ADP-heptose--LPS heptosyltransferase 2 THII_0106 IPR002201 Glycosyl transferase, family 9 THII_0110 IPR003782 Copper chaperone SCO1/SenC THII_0110 IPR036249 Thioredoxin-like superfamily THII_0110 IPR013766 Thioredoxin domain THII_0118 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily THII_0118 IPR029055 Nucleophile aminohydrolases, N-terminal THII_0118 IPR002489 Glutamate synthase, alpha subunit, C-terminal THII_0118 IPR017932 Glutamine amidotransferase type 2 domain THII_0118 IPR002932 Glutamate synthase domain THII_0118 IPR013785 Aldolase-type TIM barrel THII_0118 IPR006982 Glutamate synthase, central-N THII_0119 IPR026669 Arsenite methyltransferase-like THII_0119 IPR025714 Methyltransferase domain THII_0119 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0122 IPR007349 Domain of unknown function DUF418 THII_0124 IPR016185 Pre-ATP-grasp domain superfamily THII_0124 IPR020560 Phosphoribosylglycinamide synthetase, C-domain THII_0124 IPR000115 Phosphoribosylglycinamide synthetase THII_0124 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain THII_0124 IPR020559 Phosphoribosylglycinamide synthetase, conserved site THII_0124 IPR013815 ATP-grasp fold, subdomain 1 THII_0124 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal THII_0124 IPR011761 ATP-grasp fold THII_0124 IPR011054 Rudiment single hybrid motif THII_0124 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily THII_0125 IPR005228 Conserved hypothetical protein CHP00251 THII_0125 IPR003746 Protein of unknown function DUF167 THII_0125 IPR036591 YggU-like superfamily THII_0129 IPR041628 ChlI/MoxR, AAA lid domain THII_0129 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0129 IPR011703 ATPase, AAA-3 THII_0138 IPR017871 ABC transporter, conserved site THII_0138 IPR017911 ABC transporter, macrolide export, ATP-binding domain THII_0138 IPR003838 ABC transporter permease protein domain THII_0138 IPR025857 MacB-like periplasmic core domain THII_0138 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0138 IPR003439 ABC transporter-like THII_0138 IPR003593 AAA+ ATPase domain THII_0139 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E THII_0139 IPR025857 MacB-like periplasmic core domain THII_0139 IPR003838 ABC transporter permease protein domain THII_0142 IPR002547 tRNA-binding domain THII_0142 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0142 IPR012340 Nucleic acid-binding, OB-fold THII_0142 IPR029038 Methionyl-tRNA synthetase, Zn-domain THII_0142 IPR033911 Methioninyl-tRNA synthetase core domain THII_0142 IPR015413 Methionyl/Leucyl tRNA synthetase THII_0142 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THII_0142 IPR023458 Methionine-tRNA ligase, type 1 THII_0142 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THII_0142 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain THII_0142 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal THII_0142 IPR014758 Methionyl-tRNA synthetase THII_0143 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type THII_0143 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site THII_0143 IPR015391 SurA N-terminal THII_0143 IPR023034 Peptidyl-prolyl isomerase SurA THII_0143 IPR027304 Trigger factor/SurA domain superfamily THII_0144 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily THII_0144 IPR000119 Histone-like DNA-binding protein THII_0144 IPR020816 Histone-like DNA-binding protein, conserved site THII_0145 IPR027065 Lon protease THII_0145 IPR015947 PUA-like superfamily THII_0145 IPR008269 Peptidase S16, Lon proteolytic domain THII_0145 IPR004815 Lon protease, bacterial/eukaryotic-type THII_0145 IPR003111 Lon, substrate-binding domain THII_0145 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0145 IPR027543 Lon protease, bacterial THII_0145 IPR008268 Peptidase S16, active site THII_0145 IPR003959 ATPase, AAA-type, core THII_0145 IPR003593 AAA+ ATPase domain THII_0145 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_0145 IPR020568 Ribosomal protein S5 domain 2-type fold THII_0146 IPR038366 Zinc finger, ClpX C4-type superfamily THII_0146 IPR003959 ATPase, AAA-type, core THII_0146 IPR019489 Clp ATPase, C-terminal THII_0146 IPR004487 Clp protease, ATP-binding subunit ClpX THII_0146 IPR010603 Zinc finger, ClpX C4-type THII_0146 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0146 IPR003593 AAA+ ATPase domain THII_0147 IPR001907 ATP-dependent Clp protease proteolytic subunit THII_0147 IPR029045 ClpP/crotonase-like domain superfamily THII_0147 IPR018215 ClpP, Ser active site THII_0147 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA THII_0147 IPR033135 ClpP, histidine active site THII_0148 IPR008881 Trigger factor, ribosome-binding, bacterial THII_0148 IPR005215 Trigger factor THII_0148 IPR037041 Trigger factor, C-terminal domain superfamily THII_0148 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain THII_0148 IPR008880 Trigger factor, C-terminal THII_0148 IPR027304 Trigger factor/SurA domain superfamily THII_0148 IPR036611 Trigger factor ribosome-binding domain superfamily THII_0150 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0150 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0151 IPR004821 Cytidyltransferase-like domain THII_0151 IPR001980 Phosphopantetheine adenylyltransferase THII_0151 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0152 IPR013785 Aldolase-type TIM barrel THII_0152 IPR030656 Delta-aminolevulinic acid dehydratase, active site THII_0152 IPR001731 Delta-aminolevulinic acid dehydratase THII_0154 IPR012340 Nucleic acid-binding, OB-fold THII_0154 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain THII_0154 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 THII_0154 IPR002547 tRNA-binding domain THII_0154 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain THII_0154 IPR005146 B3/B4 tRNA-binding domain THII_0154 IPR009061 Putative DNA-binding domain superfamily THII_0154 IPR005121 Ferrodoxin-fold anticodon-binding domain THII_0154 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily THII_0154 IPR005147 tRNA synthetase, B5-domain THII_0154 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit THII_0155 IPR000119 Histone-like DNA-binding protein THII_0155 IPR005684 Integration host factor, alpha subunit THII_0155 IPR020816 Histone-like DNA-binding protein, conserved site THII_0155 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily THII_0157 IPR023063 FeS cluster insertion protein ErpA THII_0157 IPR017870 FeS cluster insertion, C-terminal, conserved site THII_0157 IPR035903 HesB-like domain superfamily THII_0157 IPR000361 FeS cluster biogenesis THII_0157 IPR016092 FeS cluster insertion protein THII_0163 IPR021027 Transposase, putative, helix-turn-helix domain THII_0163 IPR010095 Transposase IS605, OrfB, C-terminal THII_0163 IPR001959 Probable transposase, IS891/IS1136/IS1341 THII_0176 IPR003593 AAA+ ATPase domain THII_0176 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0176 IPR027785 UvrD-like helicase C-terminal domain THII_0176 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain THII_0176 IPR006344 RecBCD enzyme subunit RecD THII_0177 IPR006311 Twin-arginine translocation pathway, signal sequence THII_0177 IPR021731 AMIN domain THII_0177 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain THII_0178 IPR001107 Band 7 domain THII_0178 IPR036013 Band 7/SPFH domain superfamily THII_0178 IPR018080 Band 7/stomatin-like, conserved site THII_0178 IPR001972 Stomatin family THII_0180 IPR013766 Thioredoxin domain THII_0180 IPR005746 Thioredoxin THII_0180 IPR017937 Thioredoxin, conserved site THII_0180 IPR036249 Thioredoxin-like superfamily THII_0181 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THII_0181 IPR011129 Cold shock domain THII_0181 IPR004665 Transcription termination factor Rho THII_0181 IPR011113 Rho termination factor, RNA-binding domain THII_0181 IPR036269 Rho termination factor, N-terminal domain superfamily THII_0181 IPR011112 Rho termination factor, N-terminal THII_0181 IPR003593 AAA+ ATPase domain THII_0181 IPR041703 Transcription termination factor Rho, ATP binding domain THII_0181 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0181 IPR012340 Nucleic acid-binding, OB-fold THII_0182 IPR029044 Nucleotide-diphospho-sugar transferases THII_0184 IPR003836 Glucokinase THII_0185 IPR001173 Glycosyltransferase 2-like THII_0185 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA THII_0185 IPR029044 Nucleotide-diphospho-sugar transferases THII_0186 IPR008538 Domain of unknown function DUF820 THII_0186 IPR011335 Restriction endonuclease type II-like THII_0189 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0189 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0189 IPR011006 CheY-like superfamily THII_0189 IPR003594 Histidine kinase/HSP90-like ATPase THII_0189 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0189 IPR001789 Signal transduction response regulator, receiver domain THII_0189 IPR005467 Histidine kinase domain THII_0189 IPR029151 Periplasmic sensor-like domain superfamily THII_0189 IPR015387 LuxQ, periplasmic THII_0189 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0189 IPR035965 PAS domain superfamily THII_0191 IPR036046 Acylphosphatase-like domain superfamily THII_0191 IPR017968 Acylphosphatase, conserved site THII_0191 IPR020456 Acylphosphatase THII_0191 IPR001792 Acylphosphatase-like domain THII_0192 IPR000412 ABC-2 transporter THII_0192 IPR013525 ABC-2 type transporter THII_0194 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related THII_0194 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead THII_0194 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding THII_0194 IPR006311 Twin-arginine translocation pathway, signal sequence THII_0194 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily THII_0195 IPR017611 Xanthine dehydrogenase E subunit THII_0195 IPR012675 Beta-grasp domain superfamily THII_0195 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site THII_0195 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THII_0195 IPR036010 2Fe-2S ferredoxin-like superfamily THII_0195 IPR036884 [2Fe-2S]-binding domain superfamily THII_0195 IPR002888 [2Fe-2S]-binding THII_0196 IPR001341 Aspartate kinase THII_0196 IPR018042 Aspartate kinase, conserved site THII_0196 IPR027795 CASTOR, ACT domain THII_0196 IPR041740 Aspartokinase catalytic domain THII_0196 IPR002912 ACT domain THII_0196 IPR036393 Acetylglutamate kinase-like superfamily THII_0196 IPR001048 Aspartate/glutamate/uridylate kinase THII_0196 IPR005260 Aspartate kinase, monofunctional class THII_0197 IPR003751 Translational regulator CsrA THII_0197 IPR036107 Carbon storage regulator superfamily THII_0199 IPR035681 ComA-like, MBL domain THII_0199 IPR001279 Metallo-beta-lactamase THII_0199 IPR004797 Competence protein ComEC/Rec2 THII_0199 IPR004477 ComEC/Rec2-related protein THII_0199 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_0200 IPR040758 Release factor glutamine methyltransferase, N-terminal domain THII_0200 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific THII_0200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0200 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THII_0200 IPR004556 Methyltransferase HemK-like THII_0200 IPR007848 Methyltransferase small domain THII_0201 IPR035994 Nucleoside phosphorylase superfamily THII_0201 IPR000845 Nucleoside phosphorylase domain THII_0201 IPR010044 Methylthioadenosine phosphorylase (MTAP) THII_0201 IPR018099 Purine phosphorylase, family 2, conserved site THII_0204 IPR013216 Methyltransferase type 11 THII_0204 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0204 IPR010233 Ubiquinone biosynthesis O-methyltransferase THII_0209 IPR018510 Diaminopimelate epimerase, active site THII_0209 IPR001653 Diaminopimelate epimerase, DapF THII_0211 IPR022822 Lactate utilization protein A THII_0211 IPR004017 Cysteine-rich domain THII_0213 IPR003593 AAA+ ATPase domain THII_0213 IPR003439 ABC transporter-like THII_0213 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0213 IPR029439 Wzt, C-terminal THII_0214 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal THII_0214 IPR028343 Fructose-1,6-bisphosphatase THII_0214 IPR000146 Fructose-1,6-bisphosphatase class 1 THII_0216 IPR005144 ATP-cone domain THII_0216 IPR039718 Ribonucleoside-diphosphate reductase large subunit THII_0216 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal THII_0216 IPR013509 Ribonucleotide reductase large subunit, N-terminal THII_0216 IPR000788 Ribonucleotide reductase large subunit, C-terminal THII_0216 IPR013346 Ribonucleotide reductase, class I , alpha subunit THII_0217 IPR034733 Acetyl-CoA carboxylase THII_0217 IPR029045 ClpP/crotonase-like domain superfamily THII_0217 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit THII_0217 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal THII_0217 IPR041010 Acetyl-coA carboxylase zinc finger domain THII_0223 IPR037066 TonB-dependent receptor, plug domain superfamily THII_0223 IPR010101 TonB-dependent vitamin B12 transporter BtuB THII_0223 IPR039426 Vitamin B12 transporter BtuB-like THII_0223 IPR012910 TonB-dependent receptor, plug domain THII_0223 IPR000531 TonB-dependent receptor-like, beta-barrel THII_0223 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily THII_0230 IPR017972 Cytochrome P450, conserved site THII_0230 IPR001128 Cytochrome P450 THII_0230 IPR002397 Cytochrome P450, B-class THII_0230 IPR036396 Cytochrome P450 superfamily THII_0231 IPR000835 MarR-type HTH domain THII_0231 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0231 IPR036390 Winged helix DNA-binding domain superfamily THII_0233 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0233 IPR006076 FAD dependent oxidoreductase THII_0234 IPR005814 Aminotransferase class-III THII_0234 IPR036291 NAD(P)-binding domain superfamily THII_0234 IPR015424 Pyridoxal phosphate-dependent transferase THII_0242 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal THII_0242 IPR001206 Diacylglycerol kinase, catalytic domain THII_0242 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily THII_0242 IPR005218 Diacylglycerol/lipid kinase THII_0243 IPR002938 FAD-binding domain THII_0243 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0243 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site THII_0243 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 THII_0246 IPR036259 MFS transporter superfamily THII_0246 IPR020846 Major facilitator superfamily domain THII_0246 IPR011701 Major facilitator superfamily THII_0248 IPR003716 DNA-directed RNA polymerase, omega subunit THII_0248 IPR036161 RPB6/omega subunit-like superfamily THII_0248 IPR006110 RNA polymerase, subunit omega/K/RPB6 THII_0248 IPR012293 RNA polymerase subunit, RPB6/omega THII_0249 IPR002912 ACT domain THII_0249 IPR012675 Beta-grasp domain superfamily THII_0249 IPR012676 TGS-like THII_0249 IPR004095 TGS THII_0249 IPR004811 RelA/SpoT family THII_0249 IPR003607 HD/PDEase domain THII_0249 IPR033655 RelA, TGS domain THII_0249 IPR007685 RelA/SpoT THII_0250 IPR036255 YgfB-like superfamily THII_0250 IPR011978 Uncharacterised protein family UPF0149 THII_0251 IPR007865 Aminopeptidase P, N-terminal THII_0251 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal THII_0251 IPR036005 Creatinase/aminopeptidase-like THII_0251 IPR000994 Peptidase M24 THII_0251 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site THII_0251 IPR001714 Peptidase M24, methionine aminopeptidase THII_0252 IPR036249 Thioredoxin-like superfamily THII_0256 IPR011834 Alpha-glucan phosphorylase THII_0256 IPR000811 Glycosyl transferase, family 35 THII_0256 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 THII_0256 IPR035090 Phosphorylase pyridoxal-phosphate attachment site THII_0257 IPR027303 Glutamine synthetase, glycine-rich site THII_0257 IPR004809 Glutamine synthetase type I THII_0257 IPR001637 Glutamine synthetase class-I, adenylation site THII_0257 IPR008147 Glutamine synthetase, beta-Grasp domain THII_0257 IPR036651 Glutamine synthetase, N-terminal domain superfamily THII_0257 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain THII_0257 IPR027302 Glutamine synthetase, N-terminal conserved site THII_0257 IPR008146 Glutamine synthetase, catalytic domain THII_0259 IPR036837 Cation efflux protein, cytoplasmic domain superfamily THII_0259 IPR027470 Cation efflux protein, cytoplasmic domain THII_0259 IPR027469 Cation efflux transmembrane domain superfamily THII_0259 IPR002524 Cation efflux protein THII_0260 IPR003506 Chlamydia cysteine-rich outer membrane protein 6 THII_0260 IPR001434 Domain of unknown function DUF11 THII_0261 IPR003742 RNA methyltransferase RlmH THII_0261 IPR029028 Alpha/beta knot methyltransferases THII_0261 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THII_0262 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein THII_0262 IPR029001 Inosine triphosphate pyrophosphatase-like THII_0266 IPR006047 Glycosyl hydrolase, family 13, catalytic domain THII_0266 IPR006046 Alpha amylase THII_0266 IPR031319 Alpha-amylase, C-terminal domain THII_0266 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta THII_0266 IPR017853 Glycoside hydrolase superfamily THII_0266 IPR013780 Glycosyl hydrolase, all-beta THII_0267 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0267 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0267 IPR005467 Histidine kinase domain THII_0267 IPR001789 Signal transduction response regulator, receiver domain THII_0267 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_0267 IPR036641 HPT domain superfamily THII_0267 IPR003594 Histidine kinase/HSP90-like ATPase THII_0267 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0267 IPR011006 CheY-like superfamily THII_0267 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0268 IPR033414 Periplasmic sensor domain THII_0268 IPR036641 HPT domain superfamily THII_0268 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0268 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0268 IPR005467 Histidine kinase domain THII_0268 IPR003660 HAMP domain THII_0268 IPR003594 Histidine kinase/HSP90-like ATPase THII_0268 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0268 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_0268 IPR001789 Signal transduction response regulator, receiver domain THII_0268 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0268 IPR011006 CheY-like superfamily THII_0270 IPR002324 Cytochrome c, class ID THII_0270 IPR036909 Cytochrome c-like domain superfamily THII_0270 IPR009056 Cytochrome c-like domain THII_0271 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site THII_0271 IPR006657 Molybdopterin dinucleotide-binding domain THII_0271 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE THII_0271 IPR009010 Aspartate decarboxylase-like domain superfamily THII_0271 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_0271 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain THII_0271 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site THII_0271 IPR006311 Twin-arginine translocation pathway, signal sequence THII_0271 IPR006656 Molybdopterin oxidoreductase THII_0279 IPR011335 Restriction endonuclease type II-like THII_0279 IPR008538 Domain of unknown function DUF820 THII_0285 IPR036291 NAD(P)-binding domain superfamily THII_0285 IPR016040 NAD(P)-binding domain THII_0285 IPR006368 GDP-mannose 4,6-dehydratase THII_0286 IPR036291 NAD(P)-binding domain superfamily THII_0286 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase THII_0286 IPR001509 NAD-dependent epimerase/dehydratase THII_0287 IPR000456 Ribosomal protein L17 THII_0287 IPR036373 Ribosomal protein L17 superfamily THII_0288 IPR011262 DNA-directed RNA polymerase, insert domain THII_0288 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type THII_0288 IPR036603 RNA polymerase, RBP11-like subunit THII_0288 IPR011260 RNA polymerase, alpha subunit, C-terminal THII_0288 IPR036643 DNA-directed RNA polymerase, insert domain superfamily THII_0288 IPR011773 DNA-directed RNA polymerase, alpha subunit THII_0289 IPR001912 Ribosomal protein S4/S9, N-terminal THII_0289 IPR002942 RNA-binding S4 domain THII_0289 IPR018079 Ribosomal protein S4, conserved site THII_0289 IPR036986 RNA-binding S4 domain superfamily THII_0289 IPR022801 Ribosomal protein S4/S9 THII_0289 IPR005709 Ribosomal protein S4, bacterial-type THII_0290 IPR036967 Ribosomal protein S11 superfamily THII_0290 IPR018102 Ribosomal S11, conserved site THII_0290 IPR019981 Ribosomal protein S11, bacterial-type THII_0290 IPR001971 Ribosomal protein S11 THII_0291 IPR027437 30s ribosomal protein S13, C-terminal THII_0291 IPR001892 Ribosomal protein S13 THII_0291 IPR019980 Ribosomal protein S13, bacterial-type THII_0291 IPR018269 Ribosomal protein S13, conserved site THII_0291 IPR010979 Ribosomal protein S13-like, H2TH THII_0292 IPR030659 SecY conserved site THII_0292 IPR023201 SecY domain superfamily THII_0292 IPR026593 Protein translocase subunit SecY THII_0292 IPR002208 SecY/SEC61-alpha family THII_0293 IPR036227 Ribosomal L18e/L15P superfamily THII_0293 IPR030878 Ribosomal protein L15 THII_0293 IPR001196 Ribosomal protein L15, conserved site THII_0293 IPR021131 Ribosomal protein L18e/L15P THII_0293 IPR005749 Ribosomal protein L15, bacterial-type THII_0294 IPR018038 Ribosomal protein L30, conserved site THII_0294 IPR005996 Ribosomal protein L30, bacterial-type THII_0294 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain THII_0294 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily THII_0295 IPR005712 Ribosomal protein S5, bacterial-type THII_0295 IPR018192 Ribosomal protein S5, N-terminal, conserved site THII_0295 IPR000851 Ribosomal protein S5 THII_0295 IPR020568 Ribosomal protein S5 domain 2-type fold THII_0295 IPR005324 Ribosomal protein S5, C-terminal THII_0295 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_0295 IPR013810 Ribosomal protein S5, N-terminal THII_0296 IPR005484 Ribosomal protein L18 THII_0296 IPR004389 Ribosomal protein L18, bacterial-type THII_0297 IPR000702 Ribosomal protein L6 THII_0297 IPR020040 Ribosomal protein L6, alpha-beta domain THII_0297 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily THII_0297 IPR019906 Ribosomal protein L6, bacterial-type THII_0297 IPR002358 Ribosomal protein L6, conserved site THII_0298 IPR000630 Ribosomal protein S8 THII_0298 IPR035987 Ribosomal protein S8 superfamily THII_0299 IPR018271 Ribosomal protein S14, conserved site THII_0299 IPR023036 Ribosomal protein S14, bacterial/plastid THII_0299 IPR001209 Ribosomal protein S14 THII_0300 IPR002132 Ribosomal protein L5 THII_0300 IPR031310 Ribosomal protein L5, N-terminal THII_0300 IPR031309 Ribosomal protein L5, C-terminal THII_0300 IPR022803 Ribosomal protein L5 domain superfamily THII_0300 IPR020930 Ribosomal protein L5, bacterial-type THII_0301 IPR003256 Ribosomal protein L24 THII_0301 IPR005824 KOW THII_0301 IPR041988 Ribosomal Protein L26/L24, KOW domain THII_0301 IPR014722 Ribosomal protein L2, domain 2 THII_0301 IPR005825 Ribosomal protein L24/L26, conserved site THII_0301 IPR008991 Translation protein SH3-like domain superfamily THII_0302 IPR000218 Ribosomal protein L14P THII_0302 IPR005745 Ribosomal protein L14P, bacterial-type THII_0302 IPR036853 Ribosomal protein L14 superfamily THII_0302 IPR019972 Ribosomal protein L14P, conserved site THII_0303 IPR000266 Ribosomal protein S17/S11 THII_0303 IPR019984 30S ribosomal protein S17 THII_0303 IPR012340 Nucleic acid-binding, OB-fold THII_0304 IPR018254 Ribosomal protein L29, conserved site THII_0304 IPR036049 Ribosomal protein L29/L35 superfamily THII_0304 IPR001854 Ribosomal protein L29/L35 THII_0305 IPR000114 Ribosomal protein L16 THII_0305 IPR036920 Ribosomal protein L10e/L16 superfamily THII_0305 IPR016180 Ribosomal protein L10e/L16 THII_0305 IPR020798 Ribosomal protein L16, conserved site THII_0306 IPR036419 Ribosomal protein S3, C-terminal domain superfamily THII_0306 IPR018280 Ribosomal protein S3, conserved site THII_0306 IPR015946 K homology domain-like, alpha/beta THII_0306 IPR005704 Ribosomal protein S3, bacterial-type THII_0306 IPR009019 K homology domain superfamily, prokaryotic type THII_0306 IPR004044 K Homology domain, type 2 THII_0306 IPR004087 K Homology domain THII_0306 IPR001351 Ribosomal protein S3, C-terminal THII_0307 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type THII_0307 IPR036394 Ribosomal protein L22/L17 superfamily THII_0307 IPR001063 Ribosomal protein L22/L17 THII_0307 IPR018260 Ribosomal protein L22/L17, conserved site THII_0308 IPR002222 Ribosomal protein S19/S15 THII_0308 IPR005732 Ribosomal protein S19, bacterial-type THII_0308 IPR020934 Ribosomal protein S19 conserved site THII_0308 IPR023575 Ribosomal protein S19, superfamily THII_0309 IPR005880 Ribosomal protein L2, bacterial/organellar-type THII_0309 IPR022669 Ribosomal protein L2, C-terminal THII_0309 IPR012340 Nucleic acid-binding, OB-fold THII_0309 IPR022666 Ribosomal Proteins L2, RNA binding domain THII_0309 IPR008991 Translation protein SH3-like domain superfamily THII_0309 IPR014726 Ribosomal protein L2, domain 3 THII_0309 IPR022671 Ribosomal protein L2, conserved site THII_0309 IPR014722 Ribosomal protein L2, domain 2 THII_0309 IPR002171 Ribosomal protein L2 THII_0310 IPR013025 Ribosomal protein L25/L23 THII_0310 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily THII_0310 IPR012678 Ribosomal protein L23/L15e core domain superfamily THII_0311 IPR023574 Ribosomal protein L4 domain superfamily THII_0311 IPR002136 Ribosomal protein L4/L1e THII_0311 IPR013005 50S ribosomal protein uL4 THII_0312 IPR009000 Translation protein, beta-barrel domain superfamily THII_0312 IPR019927 Ribosomal protein L3, bacterial/organelle-type THII_0312 IPR000597 Ribosomal protein L3 THII_0312 IPR019926 Ribosomal protein L3, conserved site THII_0313 IPR001848 Ribosomal protein S10 THII_0313 IPR036838 Ribosomal protein S10 domain superfamily THII_0313 IPR027486 Ribosomal protein S10 domain THII_0314 IPR033720 Elongation factor Tu, domain 2 THII_0314 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle THII_0314 IPR005225 Small GTP-binding protein domain THII_0314 IPR004161 Translation elongation factor EFTu-like, domain 2 THII_0314 IPR031157 Tr-type G domain, conserved site THII_0314 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain THII_0314 IPR009000 Translation protein, beta-barrel domain superfamily THII_0314 IPR000795 Transcription factor, GTP-binding domain THII_0314 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal THII_0314 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0314 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal THII_0315 IPR000640 Elongation factor EFG, domain V-like THII_0315 IPR009022 Elongation factor G, domain III THII_0315 IPR035647 EF-G domain III/V-like THII_0315 IPR009000 Translation protein, beta-barrel domain superfamily THII_0315 IPR041095 Elongation Factor G, domain II THII_0315 IPR005517 Translation elongation factor EFG/EF2, domain IV THII_0315 IPR004540 Translation elongation factor EFG/EF2 THII_0315 IPR035649 EFG, domain V THII_0315 IPR000795 Transcription factor, GTP-binding domain THII_0315 IPR020568 Ribosomal protein S5 domain 2-type fold THII_0315 IPR005225 Small GTP-binding protein domain THII_0315 IPR031157 Tr-type G domain, conserved site THII_0315 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0315 IPR004161 Translation elongation factor EFTu-like, domain 2 THII_0315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_0316 IPR000235 Ribosomal protein S5/S7 THII_0316 IPR005717 Ribosomal protein S7, bacterial/organellar-type THII_0316 IPR036823 Ribosomal protein S7 domain superfamily THII_0316 IPR023798 Ribosomal protein S7 domain THII_0316 IPR020606 Ribosomal protein S7, conserved site THII_0317 IPR005679 Ribosomal protein S12, bacterial-type THII_0317 IPR012340 Nucleic acid-binding, OB-fold THII_0317 IPR006032 Ribosomal protein S12/S23 THII_0322 IPR011851 Sodium/proline symporter THII_0322 IPR038377 Sodium/glucose symporter superfamily THII_0322 IPR001734 Sodium/solute symporter THII_0322 IPR018212 Sodium/solute symporter, conserved site THII_0324 IPR012127 Cytochrome c prime THII_0324 IPR002321 Cytochrome c, class II THII_0324 IPR010980 Cytochrome c/b562 THII_0324 IPR015984 Cytochrome c prime, subgroup THII_0326 IPR029058 Alpha/Beta hydrolase fold THII_0326 IPR000073 Alpha/beta hydrolase fold-1 THII_0326 IPR022742 Serine aminopeptidase, S33 THII_0328 IPR005543 PASTA domain THII_0328 IPR011009 Protein kinase-like domain superfamily THII_0328 IPR000719 Protein kinase domain THII_0328 IPR008271 Serine/threonine-protein kinase, active site THII_0330 IPR007083 RNA polymerase Rpb1, domain 4 THII_0330 IPR038120 RNA polymerase Rpb1, funnel domain superfamily THII_0330 IPR012754 DNA-directed RNA polymerase, subunit beta-prime THII_0330 IPR042102 RNA polymerase Rpb1, domain 3 superfamily THII_0330 IPR007066 RNA polymerase Rpb1, domain 3 THII_0330 IPR007080 RNA polymerase Rpb1, domain 1 THII_0330 IPR006592 RNA polymerase, N-terminal THII_0330 IPR000722 RNA polymerase, alpha subunit THII_0330 IPR007081 RNA polymerase Rpb1, domain 5 THII_0331 IPR003660 HAMP domain THII_0331 IPR003594 Histidine kinase/HSP90-like ATPase THII_0331 IPR011006 CheY-like superfamily THII_0331 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0331 IPR005467 Histidine kinase domain THII_0331 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0331 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0331 IPR036641 HPT domain superfamily THII_0331 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0331 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_0331 IPR019247 Histidine kinase BarA, N-terminal THII_0331 IPR001789 Signal transduction response regulator, receiver domain THII_0334 IPR036909 Cytochrome c-like domain superfamily THII_0334 IPR009056 Cytochrome c-like domain THII_0335 IPR023616 Cytochrome c oxidase-like, subunit I domain THII_0335 IPR036927 Cytochrome c oxidase-like, subunit I superfamily THII_0335 IPR000883 Cytochrome c oxidase subunit I THII_0335 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site THII_0336 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0336 IPR011704 ATPase, dynein-related, AAA domain THII_0336 IPR013615 CbbQ/NirQ/NorQ, C-terminal THII_0339 IPR002035 von Willebrand factor, type A THII_0339 IPR036465 von Willebrand factor A-like domain superfamily THII_0347 IPR036852 Peptidase S8/S53 domain superfamily THII_0347 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily THII_0347 IPR000209 Peptidase S8/S53 domain THII_0347 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 THII_0347 IPR023827 Peptidase S8, subtilisin, Asp-active site THII_0347 IPR022398 Peptidase S8, subtilisin, His-active site THII_0347 IPR023828 Peptidase S8, subtilisin, Ser-active site THII_0347 IPR015500 Peptidase S8, subtilisin-related THII_0347 IPR034202 Subtilisin Carlsberg-like catalytic domain THII_0348 IPR005654 ATPase, AFG1-like THII_0348 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0348 IPR030870 Cell division protein ZapE THII_0349 IPR002068 Alpha crystallin/Hsp20 domain THII_0349 IPR008978 HSP20-like chaperone THII_0350 IPR003660 HAMP domain THII_0350 IPR035965 PAS domain superfamily THII_0350 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0350 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0350 IPR013767 PAS fold THII_0350 IPR041328 ResE, histidine kinase sensor domain THII_0350 IPR000014 PAS domain THII_0350 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0350 IPR003594 Histidine kinase/HSP90-like ATPase THII_0350 IPR005467 Histidine kinase domain THII_0350 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0351 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type THII_0351 IPR017754 Agmatine deiminase THII_0353 IPR036526 Carbon-nitrogen hydrolase superfamily THII_0353 IPR003010 Carbon-nitrogen hydrolase THII_0354 IPR001789 Signal transduction response regulator, receiver domain THII_0354 IPR011006 CheY-like superfamily THII_0354 IPR000160 GGDEF domain THII_0354 IPR029787 Nucleotide cyclase THII_0355 IPR031905 Flotillin, C-terminal domain THII_0355 IPR036013 Band 7/SPFH domain superfamily THII_0355 IPR001107 Band 7 domain THII_0355 IPR027705 Flotillin family THII_0356 IPR010840 Protein of unknown function DUF1449 THII_0359 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site THII_0359 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily THII_0359 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase THII_0360 IPR029044 Nucleotide-diphospho-sugar transferases THII_0360 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site THII_0360 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase THII_0360 IPR034683 Cytidylyltransferase IspD/TarI THII_0361 IPR023081 Cell division protein FtsB THII_0361 IPR007060 Septum formation initiator FtsL/DivIC THII_0363 IPR036465 von Willebrand factor A-like domain superfamily THII_0363 IPR002035 von Willebrand factor, type A THII_0365 IPR018198 ATP phosphoribosyltransferase, conserved site THII_0365 IPR013820 ATP phosphoribosyltransferase, catalytic domain THII_0365 IPR024893 ATP phosphoribosyltransferase HisG, short form THII_0365 IPR001348 ATP phosphoribosyltransferase HisG THII_0366 IPR001986 Enolpyruvate transferase domain THII_0366 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta THII_0366 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase THII_0366 IPR036968 Enolpyruvate transferase domain superfamily THII_0367 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain THII_0367 IPR017926 Glutamine amidotransferase THII_0367 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain THII_0367 IPR006274 Carbamoyl-phosphate synthase, small subunit THII_0367 IPR029062 Class I glutamine amidotransferase-like THII_0367 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily THII_0379 IPR000023 Phosphofructokinase domain THII_0379 IPR035966 Phosphofructokinase superfamily THII_0379 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 THII_0379 IPR022953 ATP-dependent 6-phosphofructokinase THII_0381 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site THII_0381 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain THII_0381 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase THII_0381 IPR029000 Cyclophilin-like domain superfamily THII_0382 IPR006127 Periplasmic solute binding protein, ZnuA-like THII_0382 IPR035520 High-affinity zinc uptake system protein ZnuA THII_0383 IPR003593 AAA+ ATPase domain THII_0383 IPR017882 Zinc import ATP-binding protein ZnuC THII_0383 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0383 IPR003439 ABC transporter-like THII_0384 IPR037294 ABC transporter, BtuC-like THII_0384 IPR001626 ABC transporter, TroCD-like THII_0386 IPR023214 HAD superfamily THII_0386 IPR006068 Cation-transporting P-type ATPase, C-terminal THII_0386 IPR023299 P-type ATPase, cytoplasmic domain N THII_0386 IPR018303 P-type ATPase, phosphorylation site THII_0386 IPR023298 P-type ATPase, transmembrane domain superfamily THII_0386 IPR004014 Cation-transporting P-type ATPase, N-terminal THII_0386 IPR001757 P-type ATPase THII_0386 IPR036412 HAD-like superfamily THII_0386 IPR008250 P-type ATPase, A domain superfamily THII_0388 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0388 IPR003495 CobW/HypB/UreG, nucleotide-binding domain THII_0388 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal THII_0392 IPR006156 Dihydroneopterin aldolase THII_0392 IPR006157 Dihydroneopterin aldolase/epimerase domain THII_0393 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK THII_0393 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily THII_0394 IPR036291 NAD(P)-binding domain superfamily THII_0394 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0407 IPR011709 Domain of unknown function DUF1605 THII_0407 IPR011545 DEAD/DEAH box helicase domain THII_0407 IPR007502 Helicase-associated domain THII_0407 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_0407 IPR001650 Helicase, C-terminal THII_0407 IPR003593 AAA+ ATPase domain THII_0407 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0407 IPR024590 RNA helicase HrpA, C-terminal THII_0407 IPR010222 RNA helicase HrpA THII_0410 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal THII_0410 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal THII_0410 IPR012094 tRNA(Ile)-lysidine synthase THII_0410 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain THII_0410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0410 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal THII_0411 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0411 IPR020575 Heat shock protein Hsp90, N-terminal THII_0411 IPR020568 Ribosomal protein S5 domain 2-type fold THII_0411 IPR001404 Heat shock protein Hsp90 family THII_0411 IPR003594 Histidine kinase/HSP90-like ATPase THII_0411 IPR019805 Heat shock protein Hsp90, conserved site THII_0411 IPR037196 HSP90, C-terminal domain THII_0414 IPR003848 Domain of unknown function DUF218 THII_0416 IPR007197 Radical SAM THII_0416 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase THII_0416 IPR022462 Lysine-2,3-aminomutase-like THII_0416 IPR013785 Aldolase-type TIM barrel THII_0417 IPR008991 Translation protein SH3-like domain superfamily THII_0417 IPR011768 Translation elongation factor P THII_0417 IPR013852 Translation elongation factor P/YeiP, conserved site THII_0417 IPR001059 Translation elongation factor P/YeiP, central THII_0417 IPR013185 Translation elongation factor, KOW-like THII_0417 IPR020599 Translation elongation factor P/YeiP THII_0417 IPR012340 Nucleic acid-binding, OB-fold THII_0417 IPR015365 Elongation factor P, C-terminal THII_0417 IPR014722 Ribosomal protein L2, domain 2 THII_0418 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase THII_0418 IPR016181 Acyl-CoA N-acyltransferase THII_0418 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal THII_0419 IPR030700 N-end rule aminoacyl transferase THII_0419 IPR007471 N-end aminoacyl transferase, N-terminal THII_0419 IPR017138 Aspartate/glutamate leucyltransferase THII_0419 IPR016181 Acyl-CoA N-acyltransferase THII_0419 IPR007472 N-end rule aminoacyl transferase, C-terminal THII_0420 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THII_0420 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site THII_0420 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THII_0420 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase THII_0420 IPR036291 NAD(P)-binding domain superfamily THII_0421 IPR037522 HD-GYP domain THII_0421 IPR006674 HD domain THII_0421 IPR003607 HD/PDEase domain THII_0421 IPR006675 HDIG domain THII_0423 IPR001482 Type II/IV secretion system protein THII_0423 IPR013369 Type II secretion system GspE THII_0423 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0423 IPR003593 AAA+ ATPase domain THII_0423 IPR037257 General secretory system II, protein E, N-terminal superfamily THII_0423 IPR042181 Type II secretion system, protein E, N-terminal THII_0425 IPR023165 rRNA adenine dimethylase-like THII_0425 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm THII_0425 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal THII_0425 IPR011530 Ribosomal RNA adenine dimethylase THII_0425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0426 IPR035437 SNase-like, OB-fold superfamily THII_0426 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold THII_0426 IPR002071 Thermonuclease active site THII_0430 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal THII_0430 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein THII_0430 IPR009051 Alpha-helical ferredoxin THII_0430 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site THII_0430 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0430 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0430 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THII_0430 IPR036010 2Fe-2S ferredoxin-like superfamily THII_0430 IPR012675 Beta-grasp domain superfamily THII_0431 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain THII_0431 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0431 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site THII_0431 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily THII_0431 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal THII_0431 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily THII_0431 IPR011281 Succinate dehydrogenase, flavoprotein subunit THII_0431 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit THII_0432 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor THII_0432 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit THII_0432 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit THII_0433 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site THII_0433 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit THII_0433 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit THII_0433 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit THII_0434 IPR005900 6-phosphogluconolactonase, DevB-type THII_0434 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase THII_0434 IPR037171 NagB/RpiA transferase-like THII_0434 IPR039104 6-Phosphogluconolactonase THII_0435 IPR025532 Glucose-6-phosphate 1-epimerase THII_0435 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase THII_0435 IPR014718 Glycoside hydrolase-type carbohydrate-binding THII_0435 IPR011013 Galactose mutarotase-like domain superfamily THII_0436 IPR036291 NAD(P)-binding domain superfamily THII_0436 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding THII_0436 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal THII_0436 IPR019796 Glucose-6-phosphate dehydrogenase, active site THII_0436 IPR001282 Glucose-6-phosphate dehydrogenase THII_0443 IPR029151 Periplasmic sensor-like domain superfamily THII_0443 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0443 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0443 IPR005467 Histidine kinase domain THII_0443 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0443 IPR003594 Histidine kinase/HSP90-like ATPase THII_0443 IPR035965 PAS domain superfamily THII_0443 IPR011006 CheY-like superfamily THII_0443 IPR001789 Signal transduction response regulator, receiver domain THII_0443 IPR015387 LuxQ, periplasmic THII_0443 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0444 IPR021800 Domain of unknown function DUF3369 THII_0444 IPR037522 HD-GYP domain THII_0444 IPR001789 Signal transduction response regulator, receiver domain THII_0444 IPR011006 CheY-like superfamily THII_0444 IPR003607 HD/PDEase domain THII_0445 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria THII_0445 IPR014284 RNA polymerase sigma-70 like domain THII_0445 IPR000943 RNA polymerase sigma-70 THII_0445 IPR007630 RNA polymerase sigma-70 region 4 THII_0445 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_0445 IPR009042 RNA polymerase sigma-70 region 1.2 THII_0445 IPR013325 RNA polymerase sigma factor, region 2 THII_0445 IPR007627 RNA polymerase sigma-70 region 2 THII_0446 IPR029044 Nucleotide-diphospho-sugar transferases THII_0446 IPR001173 Glycosyltransferase 2-like THII_0446 IPR039528 DPM1-like THII_0448 IPR001902 SLC26A/SulP transporter THII_0448 IPR011547 SLC26A/SulP transporter domain THII_0448 IPR036513 STAS domain superfamily THII_0448 IPR002645 STAS domain THII_0449 IPR003660 HAMP domain THII_0449 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase THII_0449 IPR029787 Nucleotide cyclase THII_0461 IPR037175 Kynurenine formamidase superfamily THII_0461 IPR007325 Kynurenine formamidase/cyclase-like THII_0463 IPR002505 Phosphate acetyl/butaryl transferase THII_0463 IPR042112 Phosphate acetyltransferase, domain 2 THII_0463 IPR042113 Phosphate acetyltransferase, domain 1 THII_0463 IPR036291 NAD(P)-binding domain superfamily THII_0463 IPR015884 Malic enzyme, conserved site THII_0463 IPR012302 Malic enzyme, NAD-binding THII_0463 IPR037062 Malic enzyme, N-terminal domain superfamily THII_0463 IPR012301 Malic enzyme, N-terminal domain THII_0463 IPR012188 NAD(P)-dependent malic enzyme THII_0464 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0464 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THII_0464 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site THII_0464 IPR022879 V-type ATP synthase regulatory subunit B/beta THII_0469 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related THII_0469 IPR006311 Twin-arginine translocation pathway, signal sequence THII_0469 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding THII_0469 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily THII_0469 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily THII_0469 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead THII_0470 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase THII_0470 IPR034683 Cytidylyltransferase IspD/TarI THII_0470 IPR029044 Nucleotide-diphospho-sugar transferases THII_0470 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site THII_0472 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THII_0472 IPR002888 [2Fe-2S]-binding THII_0472 IPR036884 [2Fe-2S]-binding domain superfamily THII_0472 IPR036010 2Fe-2S ferredoxin-like superfamily THII_0472 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site THII_0473 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase THII_0473 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0474 IPR036821 Peptide deformylase superfamily THII_0474 IPR023635 Peptide deformylase THII_0475 IPR037022 Formyl transferase, C-terminal domain superfamily THII_0475 IPR005794 Methionyl-tRNA formyltransferase THII_0475 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain THII_0475 IPR011034 Formyl transferase-like, C-terminal domain superfamily THII_0475 IPR005793 Formyl transferase, C-terminal THII_0475 IPR002376 Formyl transferase, N-terminal THII_0475 IPR036477 Formyl transferase, N-terminal domain superfamily THII_0478 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0482 IPR001233 tRNA-splicing ligase, RtcB THII_0482 IPR036025 tRNA-splicing ligase RtcB-like superfamily THII_0485 IPR017871 ABC transporter, conserved site THII_0485 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0485 IPR003439 ABC transporter-like THII_0485 IPR003593 AAA+ ATPase domain THII_0487 IPR003593 AAA+ ATPase domain THII_0487 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0487 IPR003439 ABC transporter-like THII_0487 IPR017871 ABC transporter, conserved site THII_0488 IPR017911 ABC transporter, macrolide export, ATP-binding domain THII_0488 IPR017871 ABC transporter, conserved site THII_0488 IPR003439 ABC transporter-like THII_0488 IPR003838 ABC transporter permease protein domain THII_0488 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0488 IPR003593 AAA+ ATPase domain THII_0488 IPR025857 MacB-like periplasmic core domain THII_0491 IPR036249 Thioredoxin-like superfamily THII_0491 IPR003782 Copper chaperone SCO1/SenC THII_0492 IPR002197 DNA binding HTH domain, Fis-type THII_0492 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0492 IPR009057 Homeobox-like domain superfamily THII_0492 IPR001789 Signal transduction response regulator, receiver domain THII_0492 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_0492 IPR002078 RNA polymerase sigma factor 54 interaction domain THII_0492 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_0492 IPR025944 Sigma-54 interaction domain, conserved site THII_0492 IPR011006 CheY-like superfamily THII_0492 IPR003593 AAA+ ATPase domain THII_0496 IPR002686 Transposase IS200-like THII_0496 IPR036515 Transposase IS200-like superfamily THII_0500 IPR005467 Histidine kinase domain THII_0500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0500 IPR011006 CheY-like superfamily THII_0500 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0500 IPR003594 Histidine kinase/HSP90-like ATPase THII_0500 IPR015387 LuxQ, periplasmic THII_0500 IPR001789 Signal transduction response regulator, receiver domain THII_0500 IPR029151 Periplasmic sensor-like domain superfamily THII_0500 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0500 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0503 IPR042159 Flavin-trafficking protein ApbE THII_0503 IPR003374 ApbE-like superfamily THII_0503 IPR024932 Flavin transferase ApbE THII_0509 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THII_0509 IPR011639 Restriction modification methylase Eco57I THII_0509 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0512 IPR002876 Transcriptional regulator TACO1-like THII_0512 IPR017856 Integrase-like, N-terminal THII_0512 IPR026564 Transcriptional regulator TACO1-like, domain 3 THII_0512 IPR029072 YebC-like THII_0513 IPR002176 Crossover junction endodeoxyribonuclease RuvC THII_0513 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site THII_0513 IPR036397 Ribonuclease H superfamily THII_0513 IPR012337 Ribonuclease H-like superfamily THII_0514 IPR011114 Holliday junction DNA helicase RuvA, C-terminal THII_0514 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial THII_0514 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 THII_0514 IPR010994 RuvA domain 2-like THII_0514 IPR012340 Nucleic acid-binding, OB-fold THII_0514 IPR036267 RuvA, C-terminal domain superfamily THII_0514 IPR000085 Bacterial DNA recombination protein RuvA THII_0515 IPR029058 Alpha/Beta hydrolase fold THII_0515 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase THII_0515 IPR000073 Alpha/beta hydrolase fold-1 THII_0517 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 THII_0517 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid THII_0517 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily THII_0518 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit THII_0518 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THII_0519 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site THII_0519 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily THII_0519 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit THII_0519 IPR010218 NADH dehydrogenase, subunit C THII_0520 IPR001135 NADH-quinone oxidoreductase, subunit D THII_0520 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H THII_0520 IPR029014 [NiFe]-hydrogenase, large subunit THII_0520 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site THII_0520 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily THII_0523 IPR002023 NADH-quinone oxidoreductase subunit E-like THII_0523 IPR042128 NuoE domain THII_0523 IPR036249 Thioredoxin-like superfamily THII_0523 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal THII_0527 IPR019554 Soluble ligand binding domain THII_0527 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily THII_0527 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain THII_0527 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily THII_0527 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain THII_0527 IPR011537 NADH ubiquinone oxidoreductase, F subunit THII_0527 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site THII_0533 IPR040442 Pyruvate kinase-like domain superfamily THII_0533 IPR006254 Isocitrate lyase THII_0533 IPR039556 ICL/PEPM domain THII_0533 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site THII_0533 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THII_0534 IPR006252 Malate synthase A THII_0534 IPR011076 Malate synthase-like superfamily THII_0534 IPR019830 Malate synthase, conserved site THII_0534 IPR001465 Malate synthase THII_0535 IPR014284 RNA polymerase sigma-70 like domain THII_0535 IPR028630 RNA polymerase sigma factor RpoD THII_0535 IPR012760 RNA polymerase sigma factor RpoD, C-terminal THII_0535 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_0535 IPR013325 RNA polymerase sigma factor, region 2 THII_0535 IPR042189 Sigma-70 factor, region 1.1 superfamily THII_0535 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0535 IPR000943 RNA polymerase sigma-70 THII_0535 IPR007127 RNA polymerase sigma factor 70, region 1.1 THII_0535 IPR009042 RNA polymerase sigma-70 region 1.2 THII_0535 IPR007627 RNA polymerase sigma-70 region 2 THII_0535 IPR007624 RNA polymerase sigma-70 region 3 THII_0535 IPR007630 RNA polymerase sigma-70 region 4 THII_0537 IPR010970 Cysteine desulfurase, SufS THII_0537 IPR000192 Aminotransferase class V domain THII_0537 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_0537 IPR015424 Pyridoxal phosphate-dependent transferase THII_0537 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THII_0537 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_0538 IPR002891 Adenylyl-sulfate kinase THII_0538 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0540 IPR001867 OmpR/PhoB-type DNA-binding domain THII_0540 IPR011006 CheY-like superfamily THII_0540 IPR039420 Transcriptional regulatory protein WalR-like THII_0540 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0540 IPR016032 Signal transduction response regulator, C-terminal effector THII_0540 IPR001789 Signal transduction response regulator, receiver domain THII_0541 IPR005467 Histidine kinase domain THII_0541 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0541 IPR013767 PAS fold THII_0541 IPR003594 Histidine kinase/HSP90-like ATPase THII_0541 IPR000014 PAS domain THII_0541 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0541 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0541 IPR035965 PAS domain superfamily THII_0541 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0542 IPR018297 Adenylyl cyclase class-4/guanylyl cyclase, conserved site THII_0542 IPR029787 Nucleotide cyclase THII_0542 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase THII_0543 IPR007413 Protein of unknown function DUF463, YcjX-like protein THII_0544 IPR021147 Protein of unknown function DUF697 THII_0544 IPR006507 Uncharacterised protein family UPF0283 THII_0549 IPR011006 CheY-like superfamily THII_0549 IPR035909 Methylesterase CheB, C-terminal THII_0549 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase THII_0549 IPR001789 Signal transduction response regulator, receiver domain THII_0549 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type THII_0550 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THII_0550 IPR026024 Chemotaxis protein methyltransferase CheR THII_0550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0550 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily THII_0550 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal THII_0550 IPR000780 MCP methyltransferase, CheR-type THII_0552 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_0552 IPR003660 HAMP domain THII_0553 IPR036061 CheW-like domain superfamily THII_0553 IPR039315 Chemotaxis protein CheW THII_0553 IPR002545 CheW-like domain THII_0554 IPR036641 HPT domain superfamily THII_0554 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily THII_0554 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0554 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_0554 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0554 IPR036061 CheW-like domain superfamily THII_0554 IPR002545 CheW-like domain THII_0554 IPR015162 CheY binding THII_0554 IPR004105 Histidine kinase CheA-like, homodimeric domain THII_0554 IPR003594 Histidine kinase/HSP90-like ATPase THII_0554 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0554 IPR005467 Histidine kinase domain THII_0554 IPR035891 CheY-binding domain of CheA THII_0555 IPR001789 Signal transduction response regulator, receiver domain THII_0555 IPR011006 CheY-like superfamily THII_0558 IPR004662 Acetylglutamate kinase family THII_0558 IPR041727 N-Acetyl-L-glutamate kinase, cyclic THII_0558 IPR001057 Glutamate/acetylglutamate kinase THII_0558 IPR036393 Acetylglutamate kinase-like superfamily THII_0558 IPR037528 Acetylglutamate kinase ArgB THII_0558 IPR001048 Aspartate/glutamate/uridylate kinase THII_0559 IPR036714 Flavinator of succinate dehydrogenase superfamily THII_0559 IPR005631 Flavinator of succinate dehydrogenase THII_0561 IPR001943 UVR domain THII_0561 IPR010994 RuvA domain 2-like THII_0561 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 THII_0561 IPR035901 GIY-YIG endonuclease superfamily THII_0561 IPR000305 GIY-YIG endonuclease THII_0561 IPR004791 UvrABC system, subunit C THII_0561 IPR001162 UvrC family homology region THII_0561 IPR038476 UvrC homology region 2 superfamily THII_0561 IPR036876 UVR domain superfamily THII_0562 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase THII_0562 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial THII_0562 IPR000462 CDP-alcohol phosphatidyltransferase THII_0567 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain THII_0567 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain THII_0567 IPR002729 CRISPR-associated protein Cas1 THII_0568 IPR031807 HicB-like antitoxin of toxin-antitoxin system THII_0568 IPR035069 TTHA1013/TTHA0281-like THII_0571 IPR009614 Toxin YoeB THII_0571 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_0572 IPR036165 YefM-like superfamily THII_0572 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_0578 IPR014030 Beta-ketoacyl synthase, N-terminal THII_0578 IPR016039 Thiolase-like THII_0578 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_0578 IPR000794 Beta-ketoacyl synthase THII_0578 IPR014031 Beta-ketoacyl synthase, C-terminal THII_0578 IPR018201 Beta-ketoacyl synthase, active site THII_0579 IPR029069 HotDog domain superfamily THII_0579 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ THII_0579 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA THII_0584 IPR002569 Peptide methionine sulphoxide reductase MsrA THII_0584 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily THII_0586 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr THII_0586 IPR022667 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, N-terminal THII_0586 IPR002770 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, C-terminal THII_0586 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like superfamily THII_0588 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain THII_0589 IPR038591 NolW-like superfamily THII_0589 IPR001775 GspD/PilQ family THII_0589 IPR004845 Type II secretion system GspD, conserved site THII_0589 IPR005644 NolW-like THII_0589 IPR013356 Type II secretion system GspD THII_0589 IPR004846 Type II/III secretion system THII_0592 IPR036477 Formyl transferase, N-terminal domain superfamily THII_0592 IPR002376 Formyl transferase, N-terminal THII_0592 IPR005793 Formyl transferase, C-terminal THII_0592 IPR001753 Enoyl-CoA hydratase/isomerase THII_0592 IPR029045 ClpP/crotonase-like domain superfamily THII_0592 IPR009188 [NiFe]-hydrogenase maturation factor, HypX/HoxX type THII_0592 IPR011034 Formyl transferase-like, C-terminal domain superfamily THII_0593 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THII_0593 IPR007473 Ribosomal RNA large subunit methyltransferase J THII_0593 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0594 IPR013221 Mur ligase, central THII_0594 IPR036615 Mur ligase, C-terminal domain superfamily THII_0594 IPR004101 Mur ligase, C-terminal THII_0594 IPR001645 Folylpolyglutamate synthetase THII_0594 IPR018109 Folylpolyglutamate synthetase, conserved site THII_0594 IPR036565 Mur-like, catalytic domain superfamily THII_0595 IPR001085 Serine hydroxymethyltransferase THII_0595 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site THII_0595 IPR015424 Pyridoxal phosphate-dependent transferase THII_0595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_0595 IPR039429 Serine hydroxymethyltransferase-like domain THII_0595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_0596 IPR016193 Cytidine deaminase-like THII_0596 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal THII_0596 IPR011549 Riboflavin-specific deaminase, C-terminal THII_0596 IPR004794 Riboflavin biosynthesis protein RibD THII_0596 IPR016192 APOBEC/CMP deaminase, zinc-binding THII_0596 IPR024072 Dihydrofolate reductase-like domain superfamily THII_0596 IPR002125 Cytidine and deoxycytidylate deaminase domain THII_0597 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain THII_0603 IPR013760 DNA topoisomerase, type IIA-like domain superfamily THII_0603 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat THII_0603 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal THII_0603 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta THII_0603 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal THII_0603 IPR005743 DNA gyrase, subunit A THII_0603 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily THII_0604 IPR000390 Small multidrug resistance protein family THII_0605 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase THII_0605 IPR003329 Acylneuraminate cytidylyltransferase THII_0605 IPR029044 Nucleotide-diphospho-sugar transferases THII_0611 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain THII_0611 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily THII_0611 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain THII_0611 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit THII_0612 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain THII_0612 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0612 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain THII_0612 IPR011808 Sulphite reductase, dissimilatory-type beta subunit THII_0612 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0612 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily THII_0613 IPR003787 Sulphur relay, DsrE/F-like protein THII_0613 IPR027396 DsrEFH-like THII_0613 IPR017463 Sulphur relay, TusD/DsrE THII_0614 IPR027396 DsrEFH-like THII_0614 IPR017462 Sulphur relay, TusC/DsrF THII_0614 IPR003787 Sulphur relay, DsrE/F-like protein THII_0616 IPR042072 DsrC-like protein, C-terminal domain THII_0616 IPR007453 Sulphur transfer protein DsrC/TusE THII_0616 IPR025526 DsrC-like domain superfamily THII_0619 IPR023753 FAD/NAD(P)-binding domain THII_0619 IPR009051 Alpha-helical ferredoxin THII_0619 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 THII_0619 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0619 IPR028261 Dihydroprymidine dehydrogenase domain II THII_0619 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0621 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0621 IPR006311 Twin-arginine translocation pathway, signal sequence THII_0621 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0623 IPR005940 Anthranilate phosphoribosyl transferase THII_0623 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily THII_0623 IPR000312 Glycosyl transferase, family 3 THII_0623 IPR017459 Glycosyl transferase family 3, N-terminal domain THII_0623 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily THII_0627 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_0627 IPR001036 Acriflavin resistance protein THII_0634 IPR011604 Exonuclease, phage-type/RecB, C-terminal THII_0634 IPR004586 RecBCD enzyme subunit RecB THII_0634 IPR000212 DNA helicase, UvrD/REP type THII_0634 IPR014017 UvrD-like DNA helicase, C-terminal THII_0634 IPR011335 Restriction endonuclease type II-like THII_0634 IPR014016 UvrD-like helicase, ATP-binding domain THII_0634 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0634 IPR034739 UvrD/AddA helicase, N-terminal THII_0634 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type THII_0636 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_0636 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0636 IPR036641 HPT domain superfamily THII_0636 IPR019247 Histidine kinase BarA, N-terminal THII_0636 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0636 IPR011006 CheY-like superfamily THII_0636 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0636 IPR005467 Histidine kinase domain THII_0636 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0636 IPR003594 Histidine kinase/HSP90-like ATPase THII_0636 IPR001789 Signal transduction response regulator, receiver domain THII_0636 IPR003660 HAMP domain THII_0637 IPR001296 Glycosyl transferase, family 1 THII_0637 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THII_0637 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA THII_0638 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like THII_0638 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB THII_0638 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain THII_0639 IPR004629 Glycosyl transferase WecB/TagA/CpsF THII_0639 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase THII_0640 IPR011890 Structural maintenance of chromosomes protein, prokaryotic THII_0640 IPR010935 SMCs flexible hinge THII_0640 IPR024704 Structural maintenance of chromosomes protein THII_0640 IPR003395 RecF/RecN/SMC, N-terminal THII_0640 IPR036277 SMCs flexible hinge superfamily THII_0640 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0641 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily THII_0641 IPR007449 ZipA, C-terminal FtsZ-binding domain THII_0641 IPR011919 Cell division protein ZipA THII_0642 IPR008884 Macrocin-O-methyltransferase THII_0642 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0643 IPR023612 Peptidase M4 THII_0643 IPR025711 PepSY domain THII_0643 IPR027268 Peptidase M4/M1, CTD superfamily THII_0643 IPR013856 Peptidase M4 domain THII_0643 IPR007280 Peptidase, C-terminal, archaeal/bacterial THII_0643 IPR011096 FTP domain THII_0643 IPR001570 Peptidase M4, C-terminal THII_0644 IPR013785 Aldolase-type TIM barrel THII_0644 IPR036130 Pyridoxine 5'-phosphate synthase THII_0644 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ THII_0646 IPR032466 Metal-dependent hydrolase THII_0646 IPR011059 Metal-dependent hydrolase, composite domain superfamily THII_0646 IPR006680 Amidohydrolase-related THII_0646 IPR004722 Dihydroorotase THII_0647 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain THII_0647 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding THII_0647 IPR002082 Aspartate carbamoyltransferase THII_0647 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily THII_0647 IPR006130 Aspartate/ornithine carbamoyltransferase THII_0648 IPR000836 Phosphoribosyltransferase domain THII_0648 IPR029057 Phosphoribosyltransferase-like THII_0648 IPR023050 Bifunctional protein PyrR THII_0649 IPR037027 YqgF/RNase H-like domain superfamily THII_0649 IPR012337 Ribonuclease H-like superfamily THII_0649 IPR005227 Putative pre-16S rRNA nuclease THII_0649 IPR006641 YqgF/RNase H-like domain THII_0650 IPR003774 Protein of unknown function UPF0301 THII_0655 IPR025714 Methyltransferase domain THII_0655 IPR018773 Methyltransferase regulatory domain, predicted THII_0655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0657 IPR020890 Transcription regulator HTH, HdfR THII_0657 IPR005119 LysR, substrate-binding THII_0657 IPR036390 Winged helix DNA-binding domain superfamily THII_0657 IPR000847 Transcription regulator HTH, LysR THII_0657 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0658 IPR001482 Type II/IV secretion system protein THII_0658 IPR006321 Pilus retraction protein PilT THII_0658 IPR003593 AAA+ ATPase domain THII_0658 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0659 IPR001482 Type II/IV secretion system protein THII_0659 IPR006321 Pilus retraction protein PilT THII_0659 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0659 IPR003593 AAA+ ATPase domain THII_0660 IPR006321 Pilus retraction protein PilT THII_0660 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0660 IPR003593 AAA+ ATPase domain THII_0660 IPR001482 Type II/IV secretion system protein THII_0662 IPR005895 ABC transporter, haem export, CcmA THII_0662 IPR003439 ABC transporter-like THII_0662 IPR003593 AAA+ ATPase domain THII_0662 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0663 IPR004821 Cytidyltransferase-like domain THII_0663 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0663 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain THII_0663 IPR003721 Pantoate-beta-alanine ligase THII_0667 IPR017861 Kae1/TsaD family THII_0667 IPR017860 Peptidase M22, conserved site THII_0667 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD THII_0667 IPR000905 Gcp-like domain THII_0669 IPR041492 Haloacid dehalogenase-like hydrolase THII_0669 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic THII_0669 IPR036412 HAD-like superfamily THII_0669 IPR006439 HAD hydrolase, subfamily IA THII_0669 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THII_0669 IPR023214 HAD superfamily THII_0670 IPR010233 Ubiquinone biosynthesis O-methyltransferase THII_0670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0673 IPR004299 Membrane bound O-acyl transferase, MBOAT THII_0673 IPR028362 Alginate O-acetyltransferase AlgI THII_0673 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB THII_0674 IPR020459 AMP-binding THII_0674 IPR025110 AMP-binding enzyme, C-terminal domain THII_0674 IPR020845 AMP-binding, conserved site THII_0674 IPR000873 AMP-dependent synthetase/ligase THII_0674 IPR042099 AMP-dependent synthetase-like superfamily THII_0677 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal THII_0677 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site THII_0677 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal THII_0677 IPR000183 Ornithine/DAP/Arg decarboxylase THII_0677 IPR002986 Diaminopimelate decarboxylase, LysA THII_0677 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal THII_0677 IPR029066 PLP-binding barrel THII_0678 IPR004714 Cytochrome oxidase maturation protein cbb3-type THII_0682 IPR035906 MetI-like superfamily THII_0682 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THII_0683 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt THII_0686 IPR011006 CheY-like superfamily THII_0686 IPR007492 LytTR DNA-binding domain THII_0686 IPR001789 Signal transduction response regulator, receiver domain THII_0687 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0687 IPR011006 CheY-like superfamily THII_0687 IPR003594 Histidine kinase/HSP90-like ATPase THII_0687 IPR010559 Signal transduction histidine kinase, internal region THII_0687 IPR001789 Signal transduction response regulator, receiver domain THII_0688 IPR002931 Transglutaminase-like THII_0688 IPR013589 Bacterial transglutaminase-like, N-terminal THII_0688 IPR038765 Papain-like cysteine peptidase superfamily THII_0694 IPR005757 Murein peptide ligase THII_0694 IPR013221 Mur ligase, central THII_0694 IPR000713 Mur ligase, N-terminal catalytic domain THII_0694 IPR004101 Mur ligase, C-terminal THII_0694 IPR036615 Mur ligase, C-terminal domain superfamily THII_0694 IPR036565 Mur-like, catalytic domain superfamily THII_0695 IPR004507 Flavin prenyltransferase UbiX-like THII_0695 IPR003382 Flavoprotein THII_0695 IPR036551 Flavin prenyltransferase-like THII_0699 IPR041166 LapB, rubredoxin metal binding domain THII_0699 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_0699 IPR020568 Ribosomal protein S5 domain 2-type fold THII_0699 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain THII_0699 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0699 IPR004504 DNA repair protein RadA THII_0699 IPR003593 AAA+ ATPase domain THII_0701 IPR003544 Cytochrome c-type biogenesis protein CcmB THII_0701 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria THII_0703 IPR005128 Alpha-acetolactate decarboxylase THII_0704 IPR005128 Alpha-acetolactate decarboxylase THII_0706 IPR013024 Gamma-glutamyl cyclotransferase-like THII_0706 IPR039126 Gamma-glutamylaminecyclotransferase THII_0706 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like THII_0706 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily THII_0707 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily THII_0707 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily THII_0707 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal THII_0707 IPR023459 Transcription elongation factor GreA/GreB family THII_0707 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal THII_0707 IPR028624 Transcription elongation factor GreA/GreB THII_0707 IPR018151 Transcription elongation factor, GreA/GreB, conserved site THII_0707 IPR006359 Transcription elongation factor GreA THII_0708 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain THII_0708 IPR016185 Pre-ATP-grasp domain superfamily THII_0708 IPR011607 Methylglyoxal synthase-like domain THII_0708 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain THII_0708 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain THII_0708 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily THII_0708 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain THII_0708 IPR036914 Methylglyoxal synthase-like domain superfamily THII_0708 IPR006275 Carbamoyl-phosphate synthase, large subunit THII_0708 IPR011761 ATP-grasp fold THII_0709 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily THII_0709 IPR029062 Class I glutamine amidotransferase-like THII_0709 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain THII_0709 IPR006274 Carbamoyl-phosphate synthase, small subunit THII_0709 IPR017926 Glutamine amidotransferase THII_0709 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain THII_0712 IPR015424 Pyridoxal phosphate-dependent transferase THII_0712 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_0712 IPR004636 Acetylornithine/Succinylornithine transaminase family THII_0712 IPR005814 Aminotransferase class-III THII_0712 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_0713 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily THII_0713 IPR006130 Aspartate/ornithine carbamoyltransferase THII_0713 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding THII_0713 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain THII_0713 IPR002292 Ornithine/putrescine carbamoyltransferase THII_0713 IPR024904 Ornithine carbamoyltransferase THII_0714 IPR000600 ROK family THII_0715 IPR003439 ABC transporter-like THII_0715 IPR017871 ABC transporter, conserved site THII_0715 IPR003593 AAA+ ATPase domain THII_0715 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0716 IPR001173 Glycosyltransferase 2-like THII_0716 IPR029044 Nucleotide-diphospho-sugar transferases THII_0716 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0717 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0717 IPR029044 Nucleotide-diphospho-sugar transferases THII_0717 IPR001173 Glycosyltransferase 2-like THII_0723 IPR020940 Thymidylate synthase, active site THII_0723 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily THII_0723 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain THII_0723 IPR000398 Thymidylate synthase THII_0726 IPR005814 Aminotransferase class-III THII_0726 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_0726 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_0726 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase THII_0726 IPR015424 Pyridoxal phosphate-dependent transferase THII_0727 IPR028053 Membrane insertase YidC, N-terminal THII_0727 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 THII_0727 IPR028055 Membrane insertase YidC/Oxa1, C-terminal THII_0727 IPR019998 Membrane insertase YidC THII_0727 IPR038210 Membrane insertase YidC, periplasmic domain THII_0727 IPR038221 YidC, periplasmic domain superfamily THII_0728 IPR000271 Ribosomal protein L34 THII_0728 IPR020939 Ribosomal protein L34, conserved site THII_0729 IPR001001 DNA polymerase III, beta sliding clamp THII_0729 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal THII_0729 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal THII_0729 IPR022637 DNA polymerase III, beta sliding clamp, central THII_0734 IPR001173 Glycosyltransferase 2-like THII_0734 IPR029044 Nucleotide-diphospho-sugar transferases THII_0735 IPR026634 Protein-tyrosine sulfotransferase THII_0735 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0736 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_0736 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_0736 IPR015424 Pyridoxal phosphate-dependent transferase THII_0736 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_0737 IPR001509 NAD-dependent epimerase/dehydratase THII_0737 IPR036291 NAD(P)-binding domain superfamily THII_0738 IPR029044 Nucleotide-diphospho-sugar transferases THII_0738 IPR001173 Glycosyltransferase 2-like THII_0739 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_0739 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_0739 IPR015424 Pyridoxal phosphate-dependent transferase THII_0739 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_0741 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_0741 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_0741 IPR015424 Pyridoxal phosphate-dependent transferase THII_0741 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_0743 IPR000683 Oxidoreductase, N-terminal THII_0743 IPR004104 Oxidoreductase, C-terminal THII_0743 IPR036291 NAD(P)-binding domain superfamily THII_0744 IPR001087 GDSL lipase/esterase THII_0744 IPR008265 Lipase, GDSL, active site THII_0744 IPR036514 SGNH hydrolase superfamily THII_0747 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THII_0747 IPR004398 RNA methyltransferase, RsmD THII_0747 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0748 IPR005225 Small GTP-binding protein domain THII_0748 IPR009000 Translation protein, beta-barrel domain superfamily THII_0748 IPR035647 EF-G domain III/V-like THII_0748 IPR031157 Tr-type G domain, conserved site THII_0748 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0748 IPR000795 Transcription factor, GTP-binding domain THII_0748 IPR004548 Peptide chain release factor 3 THII_0748 IPR032090 Peptide chain release factor 3, C-terminal THII_0748 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily THII_0748 IPR041732 Peptide chain release factor 3, GTP-binding domain THII_0748 IPR004161 Translation elongation factor EFTu-like, domain 2 THII_0750 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0750 IPR011006 CheY-like superfamily THII_0750 IPR003594 Histidine kinase/HSP90-like ATPase THII_0750 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0750 IPR005467 Histidine kinase domain THII_0750 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0750 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0750 IPR015387 LuxQ, periplasmic THII_0750 IPR029151 Periplasmic sensor-like domain superfamily THII_0750 IPR001789 Signal transduction response regulator, receiver domain THII_0751 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0751 IPR003660 HAMP domain THII_0751 IPR003594 Histidine kinase/HSP90-like ATPase THII_0751 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0751 IPR005467 Histidine kinase domain THII_0751 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0751 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0751 IPR019247 Histidine kinase BarA, N-terminal THII_0751 IPR036641 HPT domain superfamily THII_0751 IPR011006 CheY-like superfamily THII_0751 IPR001789 Signal transduction response regulator, receiver domain THII_0751 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_0752 IPR009049 Argininosuccinate lyase THII_0752 IPR029419 Argininosuccinate lyase, C-terminal THII_0752 IPR020557 Fumarate lyase, conserved site THII_0752 IPR022761 Fumarate lyase, N-terminal THII_0752 IPR008948 L-Aspartase-like THII_0752 IPR000362 Fumarate lyase family THII_0752 IPR024083 Fumarase/histidase, N-terminal THII_0754 IPR004131 Pyrophosphate-energised proton pump THII_0760 IPR029044 Nucleotide-diphospho-sugar transferases THII_0760 IPR001173 Glycosyltransferase 2-like THII_0762 IPR017871 ABC transporter, conserved site THII_0762 IPR039421 Type I protein exporter THII_0762 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0762 IPR011917 ABC transporter, lipid A export, MsbA THII_0762 IPR003439 ABC transporter-like THII_0762 IPR036640 ABC transporter type 1, transmembrane domain superfamily THII_0762 IPR003593 AAA+ ATPase domain THII_0762 IPR011527 ABC transporter type 1, transmembrane domain THII_0764 IPR018317 Queuosine biosynthesis protein QueC THII_0764 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0765 IPR006690 Outer membrane protein, OmpA-like, conserved site THII_0765 IPR039001 Peptidoglycan-associated lipoprotein THII_0765 IPR006664 Outer membrane protein, bacterial THII_0765 IPR036737 OmpA-like domain superfamily THII_0765 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal THII_0765 IPR006665 OmpA-like domain THII_0767 IPR005495 Permease LptG/LptF-related THII_0767 IPR030923 LPS export ABC transporter permease LptG THII_0770 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0770 IPR006082 Phosphoribulokinase THII_0770 IPR006083 Phosphoribulokinase/uridine kinase THII_0772 IPR025403 Domain of unknown function DUF4129 THII_0772 IPR002931 Transglutaminase-like THII_0772 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal THII_0772 IPR038765 Papain-like cysteine peptidase superfamily THII_0774 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily THII_0774 IPR003594 Histidine kinase/HSP90-like ATPase THII_0774 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0774 IPR005467 Histidine kinase domain THII_0774 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0774 IPR011006 CheY-like superfamily THII_0774 IPR040642 Histidine kinase receptor ArcB, transmembrane domain THII_0774 IPR001789 Signal transduction response regulator, receiver domain THII_0774 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB THII_0774 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_0774 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0774 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0774 IPR035965 PAS domain superfamily THII_0774 IPR013767 PAS fold THII_0774 IPR000014 PAS domain THII_0774 IPR036641 HPT domain superfamily THII_0774 IPR000700 PAS-associated, C-terminal THII_0775 IPR011006 CheY-like superfamily THII_0775 IPR003607 HD/PDEase domain THII_0775 IPR037522 HD-GYP domain THII_0775 IPR001789 Signal transduction response regulator, receiver domain THII_0777 IPR001633 EAL domain THII_0777 IPR029787 Nucleotide cyclase THII_0777 IPR005330 MHYT domain THII_0777 IPR000160 GGDEF domain THII_0777 IPR035919 EAL domain superfamily THII_0778 IPR023753 FAD/NAD(P)-binding domain THII_0778 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0778 IPR017938 Riboflavin synthase-like beta-barrel THII_0779 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily THII_0779 IPR028202 Reductase, C-terminal THII_0779 IPR023753 FAD/NAD(P)-binding domain THII_0779 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0780 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily THII_0780 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain THII_0780 IPR036225 SRP/SRP receptor, N-terminal THII_0780 IPR004390 Signal-recognition particle receptor FtsY THII_0780 IPR013822 Signal recognition particle SRP54, helical bundle THII_0780 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0780 IPR003593 AAA+ ATPase domain THII_0781 IPR003439 ABC transporter-like THII_0781 IPR005286 Cell division protein FtsE, ATP-binding THII_0781 IPR017871 ABC transporter, conserved site THII_0781 IPR003593 AAA+ ATPase domain THII_0781 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0782 IPR040690 FtsX, extracellular domain THII_0782 IPR004513 Cell division protein FtsX THII_0784 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I THII_0784 IPR036291 NAD(P)-binding domain superfamily THII_0784 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain THII_0784 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain THII_0784 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site THII_0784 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family THII_0785 IPR020826 Transketolase binding site THII_0785 IPR005474 Transketolase, N-terminal THII_0785 IPR033247 Transketolase family THII_0785 IPR005478 Transketolase, bacterial-like THII_0785 IPR033248 Transketolase, C-terminal domain THII_0785 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THII_0785 IPR029061 Thiamin diphosphate-binding fold THII_0785 IPR005475 Transketolase-like, pyrimidine-binding domain THII_0792 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THII_0792 IPR001387 Cro/C1-type helix-turn-helix domain THII_0794 IPR005255 PdxA family THII_0795 IPR007197 Radical SAM THII_0795 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0795 IPR006073 GTP binding domain THII_0795 IPR036726 GTP1/OBG domain superfamily THII_0795 IPR006169 GTP1/OBG domain THII_0795 IPR040084 GTPase Obg THII_0795 IPR006074 GTP1/OBG, conserved site THII_0795 IPR014100 GTP-binding protein Obg/CgtA THII_0795 IPR031167 OBG-type guanine nucleotide-binding (G) domain THII_0795 IPR013785 Aldolase-type TIM barrel THII_0798 IPR032807 Tyrosine kinase, G-rich domain THII_0798 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain THII_0798 IPR005700 Exopolysaccharide biosynthesis protein ExoP-like THII_0798 IPR005702 Exopolysaccharide synthesis protein THII_0798 IPR003856 Polysaccharide chain length determinant N-terminal domain THII_0798 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0799 IPR019554 Soluble ligand binding domain THII_0799 IPR003715 Polysaccharide export protein THII_0799 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain THII_0802 IPR039420 Transcriptional regulatory protein WalR-like THII_0802 IPR011006 CheY-like superfamily THII_0802 IPR001867 OmpR/PhoB-type DNA-binding domain THII_0802 IPR001789 Signal transduction response regulator, receiver domain THII_0802 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0803 IPR013767 PAS fold THII_0803 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0803 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0803 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0803 IPR003594 Histidine kinase/HSP90-like ATPase THII_0803 IPR035965 PAS domain superfamily THII_0803 IPR000700 PAS-associated, C-terminal THII_0803 IPR005467 Histidine kinase domain THII_0803 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0803 IPR000014 PAS domain THII_0805 IPR010139 Imidazole glycerol phosphate synthase, subunit H THII_0805 IPR017926 Glutamine amidotransferase THII_0805 IPR029062 Class I glutamine amidotransferase-like THII_0806 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0806 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site THII_0806 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase THII_0806 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 THII_0806 IPR002938 FAD-binding domain THII_0807 IPR036397 Ribonuclease H superfamily THII_0807 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type THII_0807 IPR012337 Ribonuclease H-like superfamily THII_0807 IPR003141 Polymerase/histidinol phosphatase, N-terminal THII_0807 IPR004013 PHP domain THII_0807 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_0807 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain THII_0807 IPR029460 DNA polymerase, helix-hairpin-helix motif THII_0807 IPR040982 DNA polymerase III alpha subunit finger domain THII_0807 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain THII_0807 IPR004805 DNA polymerase III, alpha subunit THII_0808 IPR003439 ABC transporter-like THII_0808 IPR003593 AAA+ ATPase domain THII_0808 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0808 IPR017871 ABC transporter, conserved site THII_0814 IPR000086 NUDIX hydrolase domain THII_0814 IPR020084 NUDIX hydrolase, conserved site THII_0814 IPR015797 NUDIX hydrolase-like domain superfamily THII_0814 IPR004385 Nucleoside diphosphate pyrophosphatase THII_0816 IPR007801 Uncharacterised protein family UPF0276 THII_0816 IPR036237 Xylose isomerase-like superfamily THII_0821 IPR007452 Translocation and assembly module TamB THII_0822 IPR003362 Bacterial sugar transferase THII_0823 IPR004517 ATP phosphoribosyltransferase regulatory subunit THII_0823 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain THII_0823 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit THII_0824 IPR000489 Pterin-binding domain THII_0824 IPR006158 Cobalamin (vitamin B12)-binding domain THII_0824 IPR036724 Cobalamin-binding domain superfamily THII_0824 IPR011005 Dihydropteroate synthase-like THII_0824 IPR003726 Homocysteine-binding domain THII_0824 IPR036589 Homocysteine-binding domain superfamily THII_0824 IPR033706 Methionine synthase, B12-binding domain THII_0824 IPR011822 Cobalamin-dependent methionine synthase THII_0824 IPR036594 Methionine synthase domain THII_0824 IPR004223 Vitamin B12-dependent methionine synthase, activation domain THII_0824 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain THII_0824 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily THII_0829 IPR001173 Glycosyltransferase 2-like THII_0829 IPR029044 Nucleotide-diphospho-sugar transferases THII_0834 IPR018107 Sodium:dicarboxylate symporter, conserved site THII_0834 IPR036458 Sodium:dicarboxylate symporter superfamily THII_0834 IPR034703 Proton/glutamate-aspartate symporter GltP THII_0834 IPR033380 Glutamate-aspartate symport protein GltP/GltT THII_0834 IPR001991 Sodium:dicarboxylate symporter THII_0835 IPR022357 Major intrinsic protein, conserved site THII_0835 IPR023743 Aquaporin Z THII_0835 IPR034294 Aquaporin transporter THII_0835 IPR023271 Aquaporin-like THII_0835 IPR000425 Major intrinsic protein THII_0837 IPR011283 Acetoacetyl-CoA reductase THII_0837 IPR036291 NAD(P)-binding domain superfamily THII_0837 IPR020904 Short-chain dehydrogenase/reductase, conserved site THII_0837 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0838 IPR012909 PHA accumulation regulator DNA-binding, N-terminal THII_0838 IPR007897 PHB accumulation regulatory THII_0838 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR THII_0839 IPR002155 Thiolase THII_0839 IPR020613 Thiolase, conserved site THII_0839 IPR020616 Thiolase, N-terminal THII_0839 IPR020617 Thiolase, C-terminal THII_0839 IPR020610 Thiolase, active site THII_0839 IPR020615 Thiolase, acyl-enzyme intermediate active site THII_0839 IPR016039 Thiolase-like THII_0841 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit THII_0841 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THII_0842 IPR022138 Helicase SWF/SNF-related THII_0842 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0842 IPR000330 SNF2-related, N-terminal domain THII_0842 IPR001650 Helicase, C-terminal THII_0842 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_0842 IPR038718 SNF2-like, N-terminal domain superfamily THII_0845 IPR004623 Potassium-transporting ATPase A chain THII_0846 IPR036412 HAD-like superfamily THII_0846 IPR023299 P-type ATPase, cytoplasmic domain N THII_0846 IPR023214 HAD superfamily THII_0846 IPR006391 P-type ATPase, B chain, subfamily IA THII_0846 IPR018303 P-type ATPase, phosphorylation site THII_0846 IPR023298 P-type ATPase, transmembrane domain superfamily THII_0846 IPR001757 P-type ATPase THII_0846 IPR008250 P-type ATPase, A domain superfamily THII_0847 IPR003820 Potassium-transporting ATPase C chain THII_0850 IPR007481 Stringent starvation protein B THII_0850 IPR036760 SspB-like superfamily THII_0851 IPR036909 Cytochrome c-like domain superfamily THII_0851 IPR002326 Cytochrome c1 THII_0851 IPR009056 Cytochrome c-like domain THII_0852 IPR036150 Cytochrome b/b6, C-terminal domain superfamily THII_0852 IPR005797 Cytochrome b/b6, N-terminal THII_0852 IPR027387 Cytochrome b/b6-like domain superfamily THII_0852 IPR030689 Cytochrome b THII_0852 IPR016174 Di-haem cytochrome, transmembrane THII_0852 IPR005798 Cytochrome b/b6, C-terminal THII_0853 IPR017941 Rieske [2Fe-2S] iron-sulphur domain THII_0853 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit THII_0853 IPR014349 Rieske iron-sulphur protein THII_0853 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily THII_0853 IPR005805 Rieske iron-sulphur protein, C-terminal THII_0853 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal THII_0854 IPR004845 Type II secretion system GspD, conserved site THII_0854 IPR001775 GspD/PilQ family THII_0854 IPR013356 Type II secretion system GspD THII_0854 IPR005644 NolW-like THII_0854 IPR004846 Type II/III secretion system THII_0854 IPR038591 NolW-like superfamily THII_0856 IPR012902 Prokaryotic N-terminal methylation site THII_0856 IPR000983 Bacterial general secretion pathway protein G-type pilin THII_0856 IPR013545 Type II secretion system protein G THII_0856 IPR010054 General secretion pathway protein G THII_0857 IPR001082 Fimbrial protein pilin THII_0857 IPR012902 Prokaryotic N-terminal methylation site THII_0857 IPR000983 Bacterial general secretion pathway protein G-type pilin THII_0858 IPR010052 Type II secretion system protein I THII_0858 IPR012902 Prokaryotic N-terminal methylation site THII_0862 IPR036291 NAD(P)-binding domain superfamily THII_0862 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) THII_0862 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0863 IPR037171 NagB/RpiA transferase-like THII_0863 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup THII_0863 IPR004788 Ribose 5-phosphate isomerase, type A THII_0864 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0864 IPR001845 HTH ArsR-type DNA-binding domain THII_0864 IPR011991 ArsR-like helix-turn-helix domain THII_0864 IPR036390 Winged helix DNA-binding domain superfamily THII_0865 IPR038770 Sodium/solute symporter superfamily THII_0865 IPR004706 Arsenical-resistance protein Acr3 THII_0865 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 THII_0866 IPR005524 Predicted permease DUF318 THII_0868 IPR036196 Phosphotyrosine protein phosphatase I superfamily THII_0868 IPR023485 Phosphotyrosine protein phosphatase I THII_0868 IPR014064 Arsenate reductase ArsC THII_0870 IPR033704 dUTPase, trimeric THII_0870 IPR036157 dUTPase-like superfamily THII_0870 IPR029054 dUTPase-like THII_0870 IPR011962 dCTP deaminase THII_0872 IPR036322 WD40-repeat-containing domain superfamily THII_0872 IPR017986 WD40-repeat-containing domain THII_0872 IPR019775 WD40 repeat, conserved site THII_0872 IPR001680 WD40 repeat THII_0872 IPR015943 WD40/YVTN repeat-like-containing domain superfamily THII_0872 IPR038765 Papain-like cysteine peptidase superfamily THII_0872 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0872 IPR020472 G-protein beta WD-40 repeat THII_0872 IPR029030 Caspase-like domain superfamily THII_0872 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain THII_0875 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase THII_0875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0875 IPR004556 Methyltransferase HemK-like THII_0875 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THII_0875 IPR007848 Methyltransferase small domain THII_0877 IPR001633 EAL domain THII_0877 IPR000160 GGDEF domain THII_0877 IPR005330 MHYT domain THII_0877 IPR035919 EAL domain superfamily THII_0877 IPR029787 Nucleotide cyclase THII_0878 IPR001789 Signal transduction response regulator, receiver domain THII_0878 IPR011006 CheY-like superfamily THII_0878 IPR001867 OmpR/PhoB-type DNA-binding domain THII_0878 IPR016032 Signal transduction response regulator, C-terminal effector THII_0878 IPR039420 Transcriptional regulatory protein WalR-like THII_0878 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0881 IPR029062 Class I glutamine amidotransferase-like THII_0881 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily THII_0881 IPR040449 LD-carboxypeptidase, N-terminal THII_0881 IPR040921 LD-carboxypeptidase, C-terminal THII_0881 IPR003507 Peptidase family S66 THII_0881 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal THII_0882 IPR000620 EamA domain THII_0884 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain THII_0884 IPR023546 Methylated-DNA--protein-cysteine methyltransferase THII_0884 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain THII_0884 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding THII_0884 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily THII_0884 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site THII_0884 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0886 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily THII_0886 IPR010203 Regulator of ribonuclease activity A THII_0886 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein THII_0891 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0891 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial THII_0891 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THII_0891 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 THII_0891 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding THII_0891 IPR000924 Glutamyl/glutaminyl-tRNA synthetase THII_0891 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain THII_0891 IPR033910 Glutamyl-tRNA synthetase THII_0902 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 THII_0902 IPR001036 Acriflavin resistance protein THII_0902 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_0903 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C THII_0903 IPR012338 Beta-lactamase/transpeptidase-like THII_0906 IPR003593 AAA+ ATPase domain THII_0906 IPR003959 ATPase, AAA-type, core THII_0906 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0914 IPR003918 NADH:ubiquinone oxidoreductase THII_0914 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THII_0915 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site THII_0915 IPR029014 [NiFe]-hydrogenase, large subunit THII_0915 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily THII_0915 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H THII_0915 IPR001135 NADH-quinone oxidoreductase, subunit D THII_0919 IPR011006 CheY-like superfamily THII_0919 IPR000160 GGDEF domain THII_0919 IPR029787 Nucleotide cyclase THII_0919 IPR001789 Signal transduction response regulator, receiver domain THII_0920 IPR006638 Elp3/MiaB/NifB THII_0920 IPR024177 Biotin synthase THII_0920 IPR007197 Radical SAM THII_0920 IPR010722 Biotin and thiamin synthesis-associated domain THII_0920 IPR013785 Aldolase-type TIM barrel THII_0920 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB THII_0921 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0921 IPR001789 Signal transduction response regulator, receiver domain THII_0921 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0921 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0921 IPR019247 Histidine kinase BarA, N-terminal THII_0921 IPR036641 HPT domain superfamily THII_0921 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_0921 IPR005467 Histidine kinase domain THII_0921 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0921 IPR003594 Histidine kinase/HSP90-like ATPase THII_0921 IPR003660 HAMP domain THII_0921 IPR011006 CheY-like superfamily THII_0927 IPR017850 Alkaline-phosphatase-like, core domain superfamily THII_0927 IPR032506 Domain of unknown function DUF4976 THII_0927 IPR024607 Sulfatase, conserved site THII_0927 IPR000917 Sulfatase, N-terminal THII_0928 IPR037518 MPN domain THII_0928 IPR025657 RadC-like JAB domain THII_0928 IPR010994 RuvA domain 2-like THII_0928 IPR020891 Uncharacterised protein family UPF0758, conserved site THII_0928 IPR001405 Uncharacterised protein family UPF0758 THII_0929 IPR003382 Flavoprotein THII_0929 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC THII_0929 IPR035929 CoaB-like superfamily THII_0929 IPR036551 Flavin prenyltransferase-like THII_0929 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal THII_0931 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type THII_0931 IPR013785 Aldolase-type TIM barrel THII_0931 IPR007197 Radical SAM THII_0931 IPR024924 7-carboxy-7-deazaguanine synthase-like THII_0936 IPR000086 NUDIX hydrolase domain THII_0936 IPR003564 Dihydroneopterin triphosphate diphosphatase THII_0936 IPR020084 NUDIX hydrolase, conserved site THII_0936 IPR015797 NUDIX hydrolase-like domain superfamily THII_0937 IPR036641 HPT domain superfamily THII_0937 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0937 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0937 IPR005467 Histidine kinase domain THII_0937 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0937 IPR003594 Histidine kinase/HSP90-like ATPase THII_0937 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0937 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_0937 IPR019247 Histidine kinase BarA, N-terminal THII_0937 IPR003660 HAMP domain THII_0937 IPR001789 Signal transduction response regulator, receiver domain THII_0937 IPR011006 CheY-like superfamily THII_0938 IPR018773 Methyltransferase regulatory domain, predicted THII_0938 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0938 IPR025714 Methyltransferase domain THII_0939 IPR003817 Phosphatidylserine decarboxylase-related THII_0939 IPR033177 Phosphatidylserine decarboxylase THII_0939 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 THII_0940 IPR008258 Transglycosylase SLT domain 1 THII_0940 IPR018392 LysM domain THII_0940 IPR023346 Lysozyme-like domain superfamily THII_0940 IPR036779 LysM domain superfamily THII_0940 IPR000189 Prokaryotic transglycosylase, active site THII_0943 IPR011006 CheY-like superfamily THII_0943 IPR000792 Transcription regulator LuxR, C-terminal THII_0943 IPR001789 Signal transduction response regulator, receiver domain THII_0943 IPR016032 Signal transduction response regulator, C-terminal effector THII_0944 IPR003594 Histidine kinase/HSP90-like ATPase THII_0944 IPR007895 MASE1 THII_0944 IPR005467 Histidine kinase domain THII_0944 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0944 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain THII_0947 IPR036779 LysM domain superfamily THII_0947 IPR018392 LysM domain THII_0947 IPR000064 Endopeptidase, NLPC/P60 domain THII_0947 IPR003646 SH3-like domain, bacterial-type THII_0947 IPR038765 Papain-like cysteine peptidase superfamily THII_0948 IPR010384 MtfA family THII_0948 IPR042252 MtfA, N-terminal THII_0948 IPR024079 Metallopeptidase, catalytic domain superfamily THII_0949 IPR006638 Elp3/MiaB/NifB THII_0949 IPR020612 Methylthiotransferase, conserved site THII_0949 IPR013848 Methylthiotransferase, N-terminal THII_0949 IPR038135 Methylthiotransferase, N-terminal domain superfamily THII_0949 IPR005840 Ribosomal protein S12 methylthiotransferase RimO THII_0949 IPR023404 Radical SAM, alpha/beta horseshoe THII_0949 IPR007197 Radical SAM THII_0949 IPR041582 RimO, TRAM domain THII_0949 IPR005839 Methylthiotransferase THII_0949 IPR002792 TRAM domain THII_0950 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily THII_0950 IPR004090 Chemotaxis methyl-accepting receptor THII_0950 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site THII_0950 IPR003660 HAMP domain THII_0950 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_0950 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding THII_0951 IPR026660 Phosphoribosyl-AMP cyclohydrolase THII_0951 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily THII_0951 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain THII_0952 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase THII_0952 IPR022893 Shikimate dehydrogenase family THII_0952 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal THII_0952 IPR011342 Shikimate dehydrogenase THII_0952 IPR041121 SDH, C-terminal THII_0952 IPR036291 NAD(P)-binding domain superfamily THII_0961 IPR023515 Quinolinate synthase A, type 3 THII_0961 IPR036094 Quinolinate synthetase A superfamily THII_0961 IPR003473 Quinolinate synthetase A THII_0962 IPR033454 RecG, wedge domain THII_0962 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0962 IPR012340 Nucleic acid-binding, OB-fold THII_0962 IPR001650 Helicase, C-terminal THII_0962 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_0962 IPR004609 ATP-dependent DNA helicase RecG THII_0962 IPR011545 DEAD/DEAH box helicase domain THII_0967 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0967 IPR000792 Transcription regulator LuxR, C-terminal THII_0967 IPR016032 Signal transduction response regulator, C-terminal effector THII_0967 IPR011006 CheY-like superfamily THII_0967 IPR001789 Signal transduction response regulator, receiver domain THII_0968 IPR005467 Histidine kinase domain THII_0968 IPR033414 Periplasmic sensor domain THII_0968 IPR036641 HPT domain superfamily THII_0968 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_0968 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_0968 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_0968 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0968 IPR003594 Histidine kinase/HSP90-like ATPase THII_0968 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_0968 IPR001789 Signal transduction response regulator, receiver domain THII_0968 IPR011006 CheY-like superfamily THII_0968 IPR003660 HAMP domain THII_0971 IPR011703 ATPase, AAA-3 THII_0971 IPR041628 ChlI/MoxR, AAA lid domain THII_0971 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0972 IPR002201 Glycosyl transferase, family 9 THII_0972 IPR011908 Lipopolysaccharide heptosyltransferase I THII_0973 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain THII_0973 IPR006145 Pseudouridine synthase, RsuA/RluA THII_0973 IPR020103 Pseudouridine synthase, catalytic domain superfamily THII_0973 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F THII_0973 IPR036986 RNA-binding S4 domain superfamily THII_0973 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site THII_0973 IPR002942 RNA-binding S4 domain THII_0980 IPR036511 Queuine tRNA-ribosyltransferase-like THII_0980 IPR004803 tRNA-guanine transglycosylase THII_0980 IPR002616 tRNA-guanine(15) transglycosylase-like THII_0981 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_0981 IPR036165 YefM-like superfamily THII_0982 IPR006367 Sirohaem synthase, N-terminal THII_0982 IPR019478 Sirohaem synthase, dimerisation domain THII_0982 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site THII_0982 IPR036291 NAD(P)-binding domain superfamily THII_0982 IPR035996 Tetrapyrrole methylase superfamily THII_0982 IPR000878 Tetrapyrrole methylase THII_0982 IPR037115 Sirohaem synthase, dimerisation domain superfamily THII_0982 IPR014777 Tetrapyrrole methylase, subdomain 1 THII_0982 IPR028281 Siroheme synthase, central domain THII_0982 IPR012409 Sirohaem synthase THII_0982 IPR006366 Uroporphyrin-III C-methyltransferase THII_0982 IPR014776 Tetrapyrrole methylase, subdomain 2 THII_0983 IPR036868 TusA-like domain superfamily THII_0983 IPR001455 TusA-like domain THII_0984 IPR032836 DsrE2-like family THII_0984 IPR027396 DsrEFH-like THII_0985 IPR036318 FAD-binding, type PCMH-like superfamily THII_0985 IPR016166 FAD-binding domain, PCMH-type THII_0985 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_0985 IPR016164 FAD-linked oxidase-like, C-terminal THII_0985 IPR006094 FAD linked oxidase, N-terminal THII_0993 IPR036515 Transposase IS200-like superfamily THII_0993 IPR002686 Transposase IS200-like THII_0999 IPR006531 Gp5 N-terminal THII_0999 IPR037026 Vgr protein, OB-fold domain superfamily THII_0999 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein THII_0999 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset THII_1001 IPR005063 Transposase, IS1 THII_1016 IPR003593 AAA+ ATPase domain THII_1016 IPR003959 ATPase, AAA-type, core THII_1016 IPR017729 Type VI secretion system, ATPase ClpV1 THII_1016 IPR041546 ClpA/ClpB, AAA lid domain THII_1016 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1016 IPR004176 Clp, N-terminal THII_1016 IPR001270 ClpA/B family THII_1016 IPR018368 ClpA/B, conserved site 1 THII_1016 IPR019489 Clp ATPase, C-terminal THII_1016 IPR036628 Clp, N-terminal domain superfamily THII_1019 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1019 IPR019247 Histidine kinase BarA, N-terminal THII_1019 IPR036641 HPT domain superfamily THII_1019 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1019 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1019 IPR001789 Signal transduction response regulator, receiver domain THII_1019 IPR003660 HAMP domain THII_1019 IPR003594 Histidine kinase/HSP90-like ATPase THII_1019 IPR005467 Histidine kinase domain THII_1019 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1019 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1019 IPR011006 CheY-like superfamily THII_1020 IPR011006 CheY-like superfamily THII_1020 IPR003594 Histidine kinase/HSP90-like ATPase THII_1020 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1020 IPR005467 Histidine kinase domain THII_1020 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1020 IPR001789 Signal transduction response regulator, receiver domain THII_1020 IPR036641 HPT domain superfamily THII_1020 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1020 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1021 IPR035965 PAS domain superfamily THII_1021 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1021 IPR005467 Histidine kinase domain THII_1021 IPR003594 Histidine kinase/HSP90-like ATPase THII_1021 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1021 IPR000014 PAS domain THII_1021 IPR001610 PAC motif THII_1021 IPR011006 CheY-like superfamily THII_1021 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1021 IPR001789 Signal transduction response regulator, receiver domain THII_1021 IPR000700 PAS-associated, C-terminal THII_1021 IPR013656 PAS fold-4 THII_1021 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1025 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain THII_1025 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain THII_1025 IPR017782 Hydroxyacylglutathione hydrolase THII_1025 IPR001279 Metallo-beta-lactamase THII_1025 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_1026 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal THII_1026 IPR023758 tRNA-modifying protein YgfZ THII_1026 IPR017703 YgfZ/GcvT conserved site THII_1027 IPR011055 Duplicated hybrid motif THII_1027 IPR007340 Opacity-associated protein A THII_1027 IPR016047 Peptidase M23 THII_1029 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 THII_1029 IPR024088 Tyrosine-tRNA ligase, bacterial-type THII_1029 IPR002307 Tyrosine-tRNA ligase THII_1029 IPR036986 RNA-binding S4 domain superfamily THII_1029 IPR002942 RNA-binding S4 domain THII_1029 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1029 IPR002305 Aminoacyl-tRNA synthetase, class Ic THII_1029 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THII_1030 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel THII_1030 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain THII_1030 IPR033940 3-isopropylmalate dehydratase, swivel domain THII_1030 IPR004431 3-isopropylmalate dehydratase, small subunit THII_1031 IPR004429 Isopropylmalate dehydrogenase THII_1031 IPR024084 Isopropylmalate dehydrogenase-like domain THII_1031 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site THII_1032 IPR012280 Semialdehyde dehydrogenase, dimerisation domain THII_1032 IPR000534 Semialdehyde dehydrogenase, NAD-binding THII_1032 IPR036291 NAD(P)-binding domain superfamily THII_1032 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type THII_1032 IPR012080 Aspartate-semialdehyde dehydrogenase THII_1034 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain THII_1034 IPR020103 Pseudouridine synthase, catalytic domain superfamily THII_1034 IPR001406 Pseudouridine synthase I, TruA THII_1034 IPR020095 Pseudouridine synthase I, TruA, C-terminal THII_1036 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_1036 IPR001789 Signal transduction response regulator, receiver domain THII_1036 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1036 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1036 IPR011006 CheY-like superfamily THII_1036 IPR035965 PAS domain superfamily THII_1036 IPR000700 PAS-associated, C-terminal THII_1036 IPR013767 PAS fold THII_1036 IPR036641 HPT domain superfamily THII_1036 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1036 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1036 IPR005467 Histidine kinase domain THII_1036 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1036 IPR003594 Histidine kinase/HSP90-like ATPase THII_1036 IPR000014 PAS domain THII_1037 IPR001789 Signal transduction response regulator, receiver domain THII_1037 IPR029787 Nucleotide cyclase THII_1037 IPR000160 GGDEF domain THII_1037 IPR011006 CheY-like superfamily THII_1038 IPR024694 PurE, prokaryotic type THII_1038 IPR000031 PurE domain THII_1038 IPR033747 Class I PurE THII_1038 IPR035893 PurE domain superfamily THII_1039 IPR013815 ATP-grasp fold, subdomain 1 THII_1039 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain THII_1039 IPR011054 Rudiment single hybrid motif THII_1039 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit THII_1039 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type THII_1039 IPR016185 Pre-ATP-grasp domain superfamily THII_1039 IPR011761 ATP-grasp fold THII_1040 IPR011096 FTP domain THII_1040 IPR025711 PepSY domain THII_1040 IPR007280 Peptidase, C-terminal, archaeal/bacterial THII_1040 IPR013856 Peptidase M4 domain THII_1040 IPR001570 Peptidase M4, C-terminal THII_1040 IPR027268 Peptidase M4/M1, CTD superfamily THII_1040 IPR023612 Peptidase M4 THII_1046 IPR002589 Macro domain THII_1050 IPR010060 Non-ribosomal peptide synthase THII_1050 IPR010071 Amino acid adenylation domain THII_1050 IPR036736 ACP-like superfamily THII_1050 IPR025110 AMP-binding enzyme, C-terminal domain THII_1050 IPR020845 AMP-binding, conserved site THII_1050 IPR000873 AMP-dependent synthetase/ligase THII_1050 IPR042099 AMP-dependent synthetase-like superfamily THII_1050 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily THII_1050 IPR001242 Condensation domain THII_1050 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THII_1050 IPR009081 Phosphopantetheine binding ACP domain THII_1050 IPR006162 Phosphopantetheine attachment site THII_1051 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1051 IPR041698 Methyltransferase domain 25 THII_1056 IPR000808 Mrp, conserved site THII_1056 IPR019591 Mrp/NBP35 ATP-binding protein THII_1056 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1056 IPR002744 MIP18 family-like THII_1056 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 THII_1056 IPR034904 Fe-S cluster assembly domain superfamily THII_1057 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1057 IPR015947 PUA-like superfamily THII_1057 IPR025980 ATP-sulfurylase PUA-like domain THII_1057 IPR002650 Sulphate adenylyltransferase THII_1057 IPR024951 Sulphate adenylyltransferase catalytic domain THII_1057 IPR020792 Sulphate adenylyltransferase, prokaryotic-type THII_1070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1070 IPR004033 UbiE/COQ5 methyltransferase THII_1070 IPR023576 UbiE/COQ5 methyltransferase, conserved site THII_1071 IPR001296 Glycosyl transferase, family 1 THII_1071 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THII_1083 IPR002934 Polymerase, nucleotidyl transferase domain THII_1084 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 THII_1091 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase THII_1091 IPR001173 Glycosyltransferase 2-like THII_1091 IPR029044 Nucleotide-diphospho-sugar transferases THII_1100 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain THII_1100 IPR016102 Succinyl-CoA synthetase-like THII_1100 IPR011761 ATP-grasp fold THII_1100 IPR000182 GNAT domain THII_1100 IPR003781 CoA-binding THII_1100 IPR013815 ATP-grasp fold, subdomain 1 THII_1100 IPR036291 NAD(P)-binding domain superfamily THII_1100 IPR016181 Acyl-CoA N-acyltransferase THII_1103 IPR036515 Transposase IS200-like superfamily THII_1103 IPR002686 Transposase IS200-like THII_1106 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA THII_1106 IPR015424 Pyridoxal phosphate-dependent transferase THII_1106 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_1106 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_1106 IPR005814 Aminotransferase class-III THII_1108 IPR001604 DNA/RNA non-specific endonuclease THII_1108 IPR020821 Extracellular Endonuclease, subunit A THII_1108 IPR040255 Non-specific endonuclease THII_1108 IPR018524 DNA/RNA non-specific endonuclease, active site THII_1110 IPR001238 DNA-binding, RecF THII_1110 IPR018078 DNA-binding, RecF, conserved site THII_1110 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1110 IPR003395 RecF/RecN/SMC, N-terminal THII_1110 IPR042174 DNA-binding RecF, domain 2 THII_1112 IPR029044 Nucleotide-diphospho-sugar transferases THII_1112 IPR001173 Glycosyltransferase 2-like THII_1112 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase THII_1118 IPR002781 Transmembrane protein TauE-like THII_1121 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1121 IPR000014 PAS domain THII_1121 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1121 IPR005467 Histidine kinase domain THII_1121 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1121 IPR003594 Histidine kinase/HSP90-like ATPase THII_1121 IPR011006 CheY-like superfamily THII_1121 IPR013656 PAS fold-4 THII_1121 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1121 IPR001789 Signal transduction response regulator, receiver domain THII_1121 IPR035965 PAS domain superfamily THII_1122 IPR011006 CheY-like superfamily THII_1122 IPR002078 RNA polymerase sigma factor 54 interaction domain THII_1122 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_1122 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_1122 IPR001789 Signal transduction response regulator, receiver domain THII_1122 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1122 IPR002197 DNA binding HTH domain, Fis-type THII_1122 IPR009057 Homeobox-like domain superfamily THII_1122 IPR025944 Sigma-54 interaction domain, conserved site THII_1122 IPR003593 AAA+ ATPase domain THII_1126 IPR002035 von Willebrand factor, type A THII_1126 IPR011392 Tellurite resistance, TerY THII_1126 IPR036465 von Willebrand factor A-like domain superfamily THII_1130 IPR029787 Nucleotide cyclase THII_1130 IPR001789 Signal transduction response regulator, receiver domain THII_1130 IPR000160 GGDEF domain THII_1130 IPR011006 CheY-like superfamily THII_1131 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1131 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1131 IPR013767 PAS fold THII_1131 IPR035965 PAS domain superfamily THII_1131 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1131 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1131 IPR000014 PAS domain THII_1131 IPR003594 Histidine kinase/HSP90-like ATPase THII_1131 IPR005467 Histidine kinase domain THII_1133 IPR029044 Nucleotide-diphospho-sugar transferases THII_1133 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type THII_1133 IPR005835 Nucleotidyl transferase domain THII_1134 IPR033580 Nurim-like THII_1134 IPR009915 NnrU domain THII_1141 IPR001173 Glycosyltransferase 2-like THII_1141 IPR029044 Nucleotide-diphospho-sugar transferases THII_1142 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1142 IPR010233 Ubiquinone biosynthesis O-methyltransferase THII_1147 IPR001959 Probable transposase, IS891/IS1136/IS1341 THII_1147 IPR021027 Transposase, putative, helix-turn-helix domain THII_1147 IPR010095 Transposase IS605, OrfB, C-terminal THII_1151 IPR038048 Magnesium transporter MgtE, transmembrane domain THII_1151 IPR038076 MgtE, N-terminal domain superfamily THII_1151 IPR006668 Magnesium transporter, MgtE intracellular domain THII_1151 IPR006669 Magnesium transporter MgtE THII_1151 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily THII_1151 IPR006667 SLC41 divalent cation transporters, integral membrane domain THII_1151 IPR000644 CBS domain THII_1153 IPR023577 CYTH domain THII_1153 IPR039013 Inorganic triphosphatase YgiF THII_1153 IPR007899 CHAD domain THII_1153 IPR033469 CYTH-like domain superfamily THII_1154 IPR012727 Glycine oxidase ThiO THII_1154 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1154 IPR006076 FAD dependent oxidoreductase THII_1158 IPR003593 AAA+ ATPase domain THII_1158 IPR001208 MCM domain THII_1158 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_1158 IPR025158 Mg chelatase-related protein, C-terminal domain THII_1158 IPR020568 Ribosomal protein S5 domain 2-type fold THII_1158 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1158 IPR004482 Mg chelatase-related protein THII_1158 IPR000523 Magnesium chelatase ChlI domain THII_1159 IPR007475 Ubiquinone biosynthesis accessory factor UbiK THII_1160 IPR003828 Epoxyqueuosine reductase QueH THII_1161 IPR001789 Signal transduction response regulator, receiver domain THII_1161 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1161 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1161 IPR019247 Histidine kinase BarA, N-terminal THII_1161 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1161 IPR005467 Histidine kinase domain THII_1161 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1161 IPR003594 Histidine kinase/HSP90-like ATPase THII_1161 IPR003660 HAMP domain THII_1161 IPR011006 CheY-like superfamily THII_1161 IPR036641 HPT domain superfamily THII_1161 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1164 IPR003400 Biopolymer transport protein ExbD/TolR THII_1164 IPR014171 TonB system transport protein ExbD type-2 THII_1165 IPR014172 TonB-system energizer ExbB type-2 THII_1165 IPR002898 MotA/TolQ/ExbB proton channel THII_1168 IPR010105 TonB-dependent siderophore receptor THII_1168 IPR010917 TonB-dependent receptor, conserved site THII_1168 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily THII_1168 IPR012910 TonB-dependent receptor, plug domain THII_1168 IPR010916 TonB box, conserved site THII_1168 IPR037066 TonB-dependent receptor, plug domain superfamily THII_1168 IPR000531 TonB-dependent receptor-like, beta-barrel THII_1168 IPR011662 Secretin/TonB, short N-terminal domain THII_1173 IPR001451 Hexapeptide repeat THII_1173 IPR018357 Hexapeptide transferase, conserved site THII_1173 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 THII_1173 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family THII_1173 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily THII_1173 IPR011004 Trimeric LpxA-like superfamily THII_1174 IPR015424 Pyridoxal phosphate-dependent transferase THII_1174 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_1174 IPR004839 Aminotransferase, class I/classII THII_1174 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_1174 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ THII_1175 IPR035956 RimP, N-terminal domain superfamily THII_1175 IPR003728 Ribosome maturation factor RimP THII_1175 IPR028989 Ribosome maturation factor RimP, N-terminal THII_1175 IPR028998 Ribosome maturation factor RimP, C-terminal THII_1175 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily THII_1176 IPR010213 Transcription termination factor NusA THII_1176 IPR012340 Nucleic acid-binding, OB-fold THII_1176 IPR010214 Transcription termination factor NusA, C-terminal duplication THII_1176 IPR003029 S1 domain THII_1176 IPR009019 K homology domain superfamily, prokaryotic type THII_1176 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical THII_1176 IPR004087 K Homology domain THII_1176 IPR030842 Transcription termination/antitermination protein NusA, bacterial THII_1176 IPR013735 Transcription factor NusA, N-terminal THII_1176 IPR015946 K homology domain-like, alpha/beta THII_1176 IPR025249 KH domain, NusA-like THII_1176 IPR022967 RNA-binding domain, S1 THII_1176 IPR036555 NusA, N-terminal domain superfamily THII_1177 IPR036925 Translation initiation factor IF-2, domain 3 superfamily THII_1177 IPR023115 Translation initiation factor IF- 2, domain 3 THII_1177 IPR000178 Translation initiation factor aIF-2, bacterial-like THII_1177 IPR009000 Translation protein, beta-barrel domain superfamily THII_1177 IPR000795 Transcription factor, GTP-binding domain THII_1177 IPR005225 Small GTP-binding protein domain THII_1177 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1177 IPR006847 Translation initiation factor IF-2, N-terminal THII_1177 IPR013575 Initiation factor 2 associated domain, bacterial THII_1177 IPR009061 Putative DNA-binding domain superfamily THII_1177 IPR015760 Translation initiation factor IF- 2 THII_1178 IPR020053 Ribosome-binding factor A, conserved site THII_1178 IPR000238 Ribosome-binding factor A THII_1178 IPR023799 Ribosome-binding factor A domain superfamily THII_1178 IPR015946 K homology domain-like, alpha/beta THII_1179 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal THII_1179 IPR014780 tRNA pseudouridine synthase II, TruB THII_1179 IPR036974 PUA domain superfamily THII_1179 IPR015947 PUA-like superfamily THII_1179 IPR002501 Pseudouridine synthase II, N-terminal THII_1179 IPR020103 Pseudouridine synthase, catalytic domain superfamily THII_1179 IPR032819 tRNA pseudouridylate synthase B, C-terminal THII_1180 IPR000589 Ribosomal protein S15 THII_1180 IPR005290 Ribosomal protein S15, bacterial-type THII_1180 IPR009068 S15/NS1, RNA-binding THII_1181 IPR020568 Ribosomal protein S5 domain 2-type fold THII_1181 IPR003029 S1 domain THII_1181 IPR022967 RNA-binding domain, S1 THII_1181 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain THII_1181 IPR027408 PNPase/RNase PH domain superfamily THII_1181 IPR012162 Polyribonucleotide nucleotidyltransferase THII_1181 IPR012340 Nucleic acid-binding, OB-fold THII_1181 IPR036612 K Homology domain, type 1 superfamily THII_1181 IPR004088 K Homology domain, type 1 THII_1181 IPR015847 Exoribonuclease, phosphorolytic domain 2 THII_1181 IPR036345 Exoribonuclease, PH domain 2 superfamily THII_1181 IPR001247 Exoribonuclease, phosphorolytic domain 1 THII_1181 IPR004087 K Homology domain THII_1189 IPR011006 CheY-like superfamily THII_1189 IPR003594 Histidine kinase/HSP90-like ATPase THII_1189 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1189 IPR001789 Signal transduction response regulator, receiver domain THII_1189 IPR013656 PAS fold-4 THII_1189 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1189 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1189 IPR001610 PAC motif THII_1189 IPR000700 PAS-associated, C-terminal THII_1189 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1189 IPR005467 Histidine kinase domain THII_1189 IPR035965 PAS domain superfamily THII_1189 IPR000014 PAS domain THII_1191 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1191 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1191 IPR003594 Histidine kinase/HSP90-like ATPase THII_1191 IPR003660 HAMP domain THII_1191 IPR011006 CheY-like superfamily THII_1191 IPR005467 Histidine kinase domain THII_1191 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1191 IPR019247 Histidine kinase BarA, N-terminal THII_1191 IPR036641 HPT domain superfamily THII_1191 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1191 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1191 IPR001789 Signal transduction response regulator, receiver domain THII_1195 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site THII_1195 IPR000715 Glycosyl transferase, family 4 THII_1195 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase THII_1196 IPR036565 Mur-like, catalytic domain superfamily THII_1196 IPR004101 Mur ligase, C-terminal THII_1196 IPR013221 Mur ligase, central THII_1196 IPR000713 Mur ligase, N-terminal catalytic domain THII_1196 IPR035911 MurE/MurF, N-terminal THII_1196 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase THII_1196 IPR036615 Mur ligase, C-terminal domain superfamily THII_1197 IPR013221 Mur ligase, central THII_1197 IPR036615 Mur ligase, C-terminal domain superfamily THII_1197 IPR004101 Mur ligase, C-terminal THII_1197 IPR000713 Mur ligase, N-terminal catalytic domain THII_1197 IPR036565 Mur-like, catalytic domain superfamily THII_1197 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase THII_1197 IPR035911 MurE/MurF, N-terminal THII_1199 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1199 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily THII_1199 IPR002903 Ribosomal RNA small subunit methyltransferase H THII_1200 IPR001110 Uncharacterised protein family UPF0012, conserved site THII_1200 IPR036526 Carbon-nitrogen hydrolase superfamily THII_1200 IPR003010 Carbon-nitrogen hydrolase THII_1202 IPR011009 Protein kinase-like domain superfamily THII_1202 IPR000719 Protein kinase domain THII_1202 IPR005532 Sulfatase-modifying factor enzyme THII_1202 IPR042095 Sulfatase-modifying factor enzyme superfamily THII_1202 IPR016187 C-type lectin fold THII_1204 IPR011867 Molybdate ABC transporter, permease protein THII_1204 IPR035906 MetI-like superfamily THII_1204 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THII_1205 IPR003439 ABC transporter-like THII_1205 IPR017871 ABC transporter, conserved site THII_1205 IPR015852 ABC transporter, molybdenum import, ModC THII_1205 IPR008995 Molybdate/tungstate binding, C-terminal THII_1205 IPR011868 Molybdate ABC transporter, ATP-binding protein THII_1205 IPR003593 AAA+ ATPase domain THII_1205 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1205 IPR005116 Transport-associated OB, type 1 THII_1205 IPR004606 Molybdenum-pterin binding THII_1208 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial THII_1208 IPR005665 Protein-export membrane protein SecF, bacterial THII_1208 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site THII_1208 IPR022645 Protein-export membrane protein SecD/SecF, bacterial THII_1209 IPR001036 Acriflavin resistance protein THII_1209 IPR005791 Protein translocase subunit SecD THII_1209 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial THII_1209 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site THII_1209 IPR022645 Protein-export membrane protein SecD/SecF, bacterial THII_1209 IPR027398 SecD export protein N-terminal TM domain THII_1210 IPR003849 Preprotein translocase YajC THII_1211 IPR034704 L28p-like THII_1211 IPR002150 Ribosomal protein L31 THII_1211 IPR027491 Ribosomal protein L31 type A THII_1211 IPR042105 Ribosomal protein L31 superfamily THII_1212 IPR005858 Cysteine synthase CysM THII_1212 IPR001926 Pyridoxal-phosphate dependent enzyme THII_1212 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THII_1212 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site THII_1212 IPR005856 Cysteine synthase THII_1213 IPR008538 Domain of unknown function DUF820 THII_1213 IPR011335 Restriction endonuclease type II-like THII_1214 IPR011557 DNA gyrase, subunit B THII_1214 IPR018522 DNA topoisomerase, type IIA, conserved site THII_1214 IPR003594 Histidine kinase/HSP90-like ATPase THII_1214 IPR034160 DNA gyrase subunit B, TOPRIM domain THII_1214 IPR002288 DNA gyrase B subunit, C-terminal THII_1214 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 THII_1214 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal THII_1214 IPR013760 DNA topoisomerase, type IIA-like domain superfamily THII_1214 IPR001241 DNA topoisomerase, type IIA THII_1214 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_1214 IPR020568 Ribosomal protein S5 domain 2-type fold THII_1214 IPR041423 DNA gyrase subunit B insert domain THII_1214 IPR006171 TOPRIM domain THII_1214 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1217 IPR001650 Helicase, C-terminal THII_1217 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1217 IPR018982 RQC domain THII_1217 IPR011545 DEAD/DEAH box helicase domain THII_1217 IPR004589 DNA helicase, ATP-dependent, RecQ type THII_1217 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial THII_1217 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_1217 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1217 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain THII_1217 IPR010997 HRDC-like superfamily THII_1217 IPR002121 HRDC domain THII_1218 IPR007349 Domain of unknown function DUF418 THII_1219 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THII_1219 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal THII_1219 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1219 IPR022878 V-type ATP synthase catalytic alpha chain THII_1219 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension THII_1219 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily THII_1219 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain THII_1225 IPR029044 Nucleotide-diphospho-sugar transferases THII_1225 IPR001173 Glycosyltransferase 2-like THII_1227 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase THII_1227 IPR003342 Glycosyl transferase family 39/83 THII_1233 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit THII_1233 IPR029058 Alpha/Beta hydrolase fold THII_1233 IPR000073 Alpha/beta hydrolase fold-1 THII_1235 IPR001764 Glycoside hydrolase, family 3, N-terminal THII_1235 IPR019800 Glycoside hydrolase, family 3, active site THII_1235 IPR017853 Glycoside hydrolase superfamily THII_1235 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily THII_1235 IPR002772 Glycoside hydrolase family 3 C-terminal domain THII_1235 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily THII_1238 IPR032887 tRNA-dihydrouridine synthase B THII_1238 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 THII_1238 IPR001269 tRNA-dihydrouridine synthase THII_1238 IPR013785 Aldolase-type TIM barrel THII_1238 IPR035587 DUS-like, FMN-binding domain THII_1238 IPR018517 tRNA-dihydrouridine synthase, conserved site THII_1238 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal THII_1239 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB THII_1239 IPR013123 RNA 2-O ribose methyltransferase, substrate binding THII_1239 IPR029028 Alpha/beta knot methyltransferases THII_1239 IPR029064 50S ribosomal protein L30e-like THII_1239 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THII_1239 IPR001537 tRNA/rRNA methyltransferase, SpoU type THII_1239 IPR004441 RNA methyltransferase TrmH family THII_1240 IPR015306 Restriction endonuclease, type II, PvuII THII_1240 IPR011335 Restriction endonuclease type II-like THII_1240 IPR038402 Restriction endonuclease, type II, PvuII superfamily THII_1241 IPR001387 Cro/C1-type helix-turn-helix domain THII_1241 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THII_1242 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site THII_1242 IPR001091 Restriction/modification DNA-methylase THII_1242 IPR002941 DNA methylase N-4/N-6 THII_1242 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1243 IPR011006 CheY-like superfamily THII_1243 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1243 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1243 IPR005467 Histidine kinase domain THII_1243 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1243 IPR015387 LuxQ, periplasmic THII_1243 IPR029151 Periplasmic sensor-like domain superfamily THII_1243 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1243 IPR001789 Signal transduction response regulator, receiver domain THII_1243 IPR003594 Histidine kinase/HSP90-like ATPase THII_1245 IPR004610 Bacterial RecJ exonuclease THII_1245 IPR041122 RecJ, OB domain THII_1245 IPR003156 DHHA1 domain THII_1245 IPR038763 DHH phosphoesterase superfamily THII_1245 IPR001667 DDH domain THII_1247 IPR002323 Cytochrome c, class IE THII_1247 IPR009056 Cytochrome c-like domain THII_1247 IPR036909 Cytochrome c-like domain superfamily THII_1249 IPR005787 Threonine dehydratase, biosynthetic THII_1249 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THII_1249 IPR038110 Threonine dehydratase, ACT-like domain superfamily THII_1249 IPR001721 Threonine dehydratase, ACT-like domain THII_1249 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site THII_1249 IPR001926 Pyridoxal-phosphate dependent enzyme THII_1250 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF THII_1250 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 THII_1251 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily THII_1251 IPR011104 HPr kinase/phosphorylase, C-terminal THII_1251 IPR003755 HPr(Ser) kinase/phosphorylase THII_1251 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal THII_1252 IPR016152 Phosphotransferase/anion transporter THII_1252 IPR002178 PTS EIIA type-2 domain THII_1252 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN THII_1253 IPR036567 Ribosome hibernation promotion factor-like THII_1253 IPR003489 Ribosome hibernation promoting factor/RaiA THII_1254 IPR007634 RNA polymerase sigma factor 54, DNA-binding THII_1254 IPR007046 RNA polymerase sigma factor 54, core-binding domain THII_1254 IPR000394 RNA polymerase sigma factor 54 THII_1254 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily THII_1255 IPR003439 ABC transporter-like THII_1255 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal THII_1255 IPR003593 AAA+ ATPase domain THII_1255 IPR030921 LPS export ABC transporter, ATP-binding protein LptB THII_1255 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1255 IPR017871 ABC transporter, conserved site THII_1256 IPR005653 Organic solvent tolerance-like, N-terminal THII_1256 IPR014340 Lipopolysaccharide export system protein LptA THII_1258 IPR023214 HAD superfamily THII_1258 IPR036412 HAD-like superfamily THII_1258 IPR010023 KdsC family THII_1259 IPR000644 CBS domain THII_1259 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type THII_1259 IPR001347 Sugar isomerase (SIS) THII_1259 IPR035474 KpsF-like, SIS domain THII_1268 IPR004525 Elongation factor P--(R)-beta-lysine ligase THII_1268 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) THII_1268 IPR006195 Aminoacyl-tRNA synthetase, class II THII_1269 IPR000905 Gcp-like domain THII_1269 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB THII_1270 IPR036397 Ribonuclease H superfamily THII_1270 IPR001098 DNA-directed DNA polymerase, family A, palm domain THII_1270 IPR019760 DNA-directed DNA polymerase, family A, conserved site THII_1270 IPR002298 DNA polymerase A THII_1270 IPR018320 DNA polymerase 1 THII_1270 IPR012337 Ribonuclease H-like superfamily THII_1270 IPR008918 Helix-hairpin-helix motif, class 2 THII_1270 IPR002421 5'-3' exonuclease, N-terminal THII_1270 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal THII_1270 IPR002562 3'-5' exonuclease domain THII_1270 IPR020045 DNA polymerase I-like, H3TH domain THII_1270 IPR029060 PIN-like domain superfamily THII_1270 IPR036279 5'-3' exonuclease, C-terminal domain superfamily THII_1273 IPR029903 RmlD-like substrate binding domain THII_1273 IPR036291 NAD(P)-binding domain superfamily THII_1273 IPR005913 dTDP-4-dehydrorhamnose reductase family THII_1275 IPR016040 NAD(P)-binding domain THII_1275 IPR036291 NAD(P)-binding domain superfamily THII_1275 IPR005886 UDP-glucose 4-epimerase THII_1276 IPR001347 Sugar isomerase (SIS) THII_1276 IPR004515 Phosphoheptose isomerase THII_1276 IPR035461 GmhA/DiaA THII_1277 IPR010090 Phage tail tape measure protein THII_1277 IPR011055 Duplicated hybrid motif THII_1277 IPR023346 Lysozyme-like domain superfamily THII_1277 IPR016047 Peptidase M23 THII_1277 IPR000189 Prokaryotic transglycosylase, active site THII_1277 IPR008258 Transglycosylase SLT domain 1 THII_1278 IPR038071 UROD/MetE-like superfamily THII_1278 IPR006361 Uroporphyrinogen decarboxylase HemE THII_1278 IPR000257 Uroporphyrinogen decarboxylase (URO-D) THII_1281 IPR012147 Phosphate acetyl/butyryltransferase THII_1281 IPR002505 Phosphate acetyl/butaryl transferase THII_1283 IPR036061 CheW-like domain superfamily THII_1283 IPR002545 CheW-like domain THII_1283 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1283 IPR001789 Signal transduction response regulator, receiver domain THII_1283 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1283 IPR036641 HPT domain superfamily THII_1283 IPR003594 Histidine kinase/HSP90-like ATPase THII_1283 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1283 IPR005467 Histidine kinase domain THII_1283 IPR011006 CheY-like superfamily THII_1285 IPR004090 Chemotaxis methyl-accepting receptor THII_1285 IPR029095 NarX-like, N-terminal THII_1285 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_1285 IPR003660 HAMP domain THII_1286 IPR002545 CheW-like domain THII_1286 IPR036061 CheW-like domain superfamily THII_1286 IPR039315 Chemotaxis protein CheW THII_1287 IPR001789 Signal transduction response regulator, receiver domain THII_1287 IPR011006 CheY-like superfamily THII_1288 IPR011006 CheY-like superfamily THII_1288 IPR001789 Signal transduction response regulator, receiver domain THII_1296 IPR017932 Glutamine amidotransferase type 2 domain THII_1296 IPR000836 Phosphoribosyltransferase domain THII_1296 IPR035584 Amidophosphoribosyltransferase, N-terminal THII_1296 IPR005854 Amidophosphoribosyltransferase THII_1296 IPR029057 Phosphoribosyltransferase-like THII_1296 IPR029055 Nucleophile aminohydrolases, N-terminal THII_1297 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_1297 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_1297 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme THII_1297 IPR006234 O-succinylhomoserine sulfhydrylase THII_1297 IPR015424 Pyridoxal phosphate-dependent transferase THII_1299 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I THII_1299 IPR029058 Alpha/Beta hydrolase fold THII_1299 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain THII_1300 IPR012340 Nucleic acid-binding, OB-fold THII_1300 IPR001900 Ribonuclease II/R THII_1301 IPR019247 Histidine kinase BarA, N-terminal THII_1301 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1301 IPR036641 HPT domain superfamily THII_1301 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1301 IPR011006 CheY-like superfamily THII_1301 IPR005467 Histidine kinase domain THII_1301 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1301 IPR003594 Histidine kinase/HSP90-like ATPase THII_1301 IPR003660 HAMP domain THII_1301 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1301 IPR001789 Signal transduction response regulator, receiver domain THII_1301 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1302 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria THII_1302 IPR008284 Molybdenum cofactor biosynthesis, conserved site THII_1302 IPR001453 MoaB/Mog domain THII_1302 IPR036425 MoaB/Mog-like domain superfamily THII_1302 IPR012245 Molybdenum cofactor biosynthesis protein MoaB THII_1303 IPR017927 FAD-binding domain, ferredoxin reductase-type THII_1303 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain THII_1303 IPR012675 Beta-grasp domain superfamily THII_1303 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site THII_1303 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THII_1303 IPR036010 2Fe-2S ferredoxin-like superfamily THII_1303 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain THII_1303 IPR001433 Oxidoreductase FAD/NAD(P)-binding THII_1303 IPR017938 Riboflavin synthase-like beta-barrel THII_1305 IPR030922 LPS export ABC transporter permease LptF THII_1305 IPR005495 Permease LptG/LptF-related THII_1306 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B THII_1306 IPR023042 Peptidase M17, leucine aminopeptidase THII_1306 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal THII_1306 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal THII_1310 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily THII_1310 IPR005843 Alpha-D-phosphohexomutase, C-terminal THII_1310 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III THII_1310 IPR016066 Alpha-D-phosphohexomutase, conserved site THII_1310 IPR005841 Alpha-D-phosphohexomutase superfamily THII_1310 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II THII_1310 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III THII_1310 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I THII_1311 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I THII_1311 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III THII_1311 IPR005841 Alpha-D-phosphohexomutase superfamily THII_1311 IPR016066 Alpha-D-phosphohexomutase, conserved site THII_1311 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily THII_1311 IPR005843 Alpha-D-phosphohexomutase, C-terminal THII_1311 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III THII_1311 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II THII_1313 IPR025857 MacB-like periplasmic core domain THII_1313 IPR003838 ABC transporter permease protein domain THII_1313 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E THII_1314 IPR011924 Lipoprotein releasing system, ATP-binding protein THII_1314 IPR015854 ABC transporter, lipoprotein release, LolD THII_1314 IPR017871 ABC transporter, conserved site THII_1314 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1314 IPR003593 AAA+ ATPase domain THII_1314 IPR003439 ABC transporter-like THII_1316 IPR029787 Nucleotide cyclase THII_1316 IPR018297 Adenylyl cyclase class-4/guanylyl cyclase, conserved site THII_1316 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase THII_1317 IPR005251 Methylthioribose-1-phosphate isomerase THII_1317 IPR037171 NagB/RpiA transferase-like THII_1317 IPR011559 Initiation factor 2B alpha/beta/delta THII_1317 IPR000649 Initiation factor 2B-related THII_1319 IPR007443 Penicillin-binding protein activator LpoA THII_1319 IPR011990 Tetratricopeptide-like helical domain superfamily THII_1319 IPR028082 Periplasmic binding protein-like I THII_1320 IPR011335 Restriction endonuclease type II-like THII_1320 IPR011856 tRNA endonuclease-like domain superfamily THII_1320 IPR003509 Uncharacterised protein family UPF0102 THII_1321 IPR003439 ABC transporter-like THII_1321 IPR017871 ABC transporter, conserved site THII_1321 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1321 IPR003593 AAA+ ATPase domain THII_1324 IPR011055 Duplicated hybrid motif THII_1324 IPR016047 Peptidase M23 THII_1324 IPR010090 Phage tail tape measure protein THII_1324 IPR000189 Prokaryotic transglycosylase, active site THII_1324 IPR008258 Transglycosylase SLT domain 1 THII_1324 IPR023346 Lysozyme-like domain superfamily THII_1325 IPR022919 Peptidase M48, protease HtpX, putative THII_1325 IPR001915 Peptidase M48 THII_1327 IPR025669 AAA domain THII_1327 IPR005702 Exopolysaccharide synthesis protein THII_1327 IPR003856 Polysaccharide chain length determinant N-terminal domain THII_1327 IPR032807 Tyrosine kinase, G-rich domain THII_1327 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1328 IPR011701 Major facilitator superfamily THII_1328 IPR020846 Major facilitator superfamily domain THII_1328 IPR036259 MFS transporter superfamily THII_1329 IPR012340 Nucleic acid-binding, OB-fold THII_1329 IPR000424 Primosome PriB/single-strand DNA-binding THII_1329 IPR011344 Single-stranded DNA-binding protein THII_1330 IPR020922 dITP/XTP pyrophosphatase THII_1330 IPR029001 Inosine triphosphate pyrophosphatase-like THII_1330 IPR002637 Ham1-like protein THII_1331 IPR036397 Ribonuclease H superfamily THII_1331 IPR012337 Ribonuclease H-like superfamily THII_1331 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_1331 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain THII_1331 IPR006309 DNA polymerase 3, epsilon subunit THII_1332 IPR020084 NUDIX hydrolase, conserved site THII_1332 IPR000086 NUDIX hydrolase domain THII_1332 IPR022927 RNA pyrophosphohydrolase RppH THII_1332 IPR020476 NUDIX hydrolase THII_1332 IPR015797 NUDIX hydrolase-like domain superfamily THII_1333 IPR013785 Aldolase-type TIM barrel THII_1333 IPR006062 Histidine biosynthesis THII_1333 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA THII_1333 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase THII_1333 IPR011060 Ribulose-phosphate binding barrel THII_1334 IPR004651 Histidine biosynthesis, HisF THII_1334 IPR006062 Histidine biosynthesis THII_1334 IPR011060 Ribulose-phosphate binding barrel THII_1334 IPR013785 Aldolase-type TIM barrel THII_1336 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like THII_1336 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase THII_1338 IPR036265 HIT-like superfamily THII_1338 IPR001310 Histidine triad (HIT) protein THII_1338 IPR011146 HIT-like domain THII_1338 IPR019808 Histidine triad, conserved site THII_1339 IPR006312 Sec-independent protein translocase protein TatA/E THII_1339 IPR003369 Sec-independent protein translocase protein TatA/B/E THII_1340 IPR003369 Sec-independent protein translocase protein TatA/B/E THII_1340 IPR018448 Twin-arginine translocation protein TatB THII_1341 IPR002033 Sec-independent periplasmic protein translocase TatC THII_1341 IPR019820 Sec-independent periplasmic protein translocase, conserved site THII_1345 IPR011051 RmlC-like cupin domain superfamily THII_1345 IPR014710 RmlC-like jelly roll fold THII_1345 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related THII_1346 IPR029044 Nucleotide-diphospho-sugar transferases THII_1346 IPR005835 Nucleotidyl transferase domain THII_1346 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form THII_1347 IPR016040 NAD(P)-binding domain THII_1347 IPR005888 dTDP-glucose 4,6-dehydratase THII_1347 IPR036291 NAD(P)-binding domain superfamily THII_1352 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_1352 IPR001036 Acriflavin resistance protein THII_1352 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA THII_1364 IPR035919 EAL domain superfamily THII_1364 IPR001633 EAL domain THII_1364 IPR029787 Nucleotide cyclase THII_1364 IPR005330 MHYT domain THII_1364 IPR000160 GGDEF domain THII_1365 IPR035965 PAS domain superfamily THII_1365 IPR011006 CheY-like superfamily THII_1365 IPR003594 Histidine kinase/HSP90-like ATPase THII_1365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1365 IPR005467 Histidine kinase domain THII_1365 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1365 IPR015387 LuxQ, periplasmic THII_1365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1365 IPR001789 Signal transduction response regulator, receiver domain THII_1365 IPR029151 Periplasmic sensor-like domain superfamily THII_1366 IPR001789 Signal transduction response regulator, receiver domain THII_1366 IPR037522 HD-GYP domain THII_1366 IPR011006 CheY-like superfamily THII_1366 IPR003607 HD/PDEase domain THII_1368 IPR033749 Polyprenyl synthetase, conserved site THII_1368 IPR000092 Polyprenyl synthetase THII_1368 IPR008949 Isoprenoid synthase domain superfamily THII_1376 IPR018028 Catalase, mono-functional, haem-containing THII_1376 IPR011614 Catalase core domain THII_1376 IPR037060 Catalase core domain superfamily THII_1376 IPR002226 Catalase haem-binding site THII_1376 IPR040333 Catalase, clade 3 THII_1376 IPR010582 Catalase immune-responsive domain THII_1376 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 THII_1376 IPR020835 Catalase superfamily THII_1376 IPR024708 Catalase active site THII_1378 IPR001872 Peptidase A8, signal peptidase II THII_1379 IPR002301 Isoleucine-tRNA ligase THII_1379 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain THII_1379 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding THII_1379 IPR010663 Zinc finger, FPG/IleRS-type THII_1379 IPR002300 Aminoacyl-tRNA synthetase, class Ia THII_1379 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THII_1379 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THII_1379 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain THII_1379 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1379 IPR023585 Isoleucine-tRNA ligase, type 1 THII_1380 IPR036670 SecA, preprotein cross-linking domain superfamily THII_1380 IPR036266 SecA, Wing/Scaffold superfamily THII_1380 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1380 IPR004027 SEC-C motif THII_1380 IPR000185 Protein translocase subunit SecA THII_1380 IPR011115 SecA DEAD-like, N-terminal THII_1380 IPR014018 SecA motor DEAD THII_1380 IPR011130 SecA, preprotein cross-linking domain THII_1380 IPR011116 SecA Wing/Scaffold THII_1380 IPR020937 SecA conserved site THII_1381 IPR002813 Arginine biosynthesis protein ArgJ THII_1381 IPR042195 ArgJ beta chain, C-terminal domain THII_1381 IPR016117 ArgJ-like domain superfamily THII_1382 IPR013785 Aldolase-type TIM barrel THII_1382 IPR036206 Thiamin phosphate synthase superfamily THII_1382 IPR022998 Thiamine phosphate synthase/TenI THII_1382 IPR034291 Thiamine phosphate synthase THII_1384 IPR001173 Glycosyltransferase 2-like THII_1384 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase THII_1384 IPR029044 Nucleotide-diphospho-sugar transferases THII_1388 IPR036873 Rhodanese-like domain superfamily THII_1388 IPR000594 THIF-type NAD/FAD binding fold THII_1388 IPR035985 Ubiquitin-activating enzyme THII_1388 IPR001763 Rhodanese-like domain THII_1390 IPR039424 Solute-binding protein family 5 THII_1390 IPR030678 Peptide/nickel binding protein, MppA-type THII_1390 IPR000914 Solute-binding protein family 5 domain THII_1392 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THII_1392 IPR035906 MetI-like superfamily THII_1393 IPR025966 Oligopeptide transport permease C-like, N-terminal domain THII_1393 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THII_1393 IPR035906 MetI-like superfamily THII_1395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1395 IPR036641 HPT domain superfamily THII_1395 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1395 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1395 IPR005467 Histidine kinase domain THII_1395 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1395 IPR001789 Signal transduction response regulator, receiver domain THII_1395 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1395 IPR003594 Histidine kinase/HSP90-like ATPase THII_1395 IPR011006 CheY-like superfamily THII_1396 IPR037522 HD-GYP domain THII_1396 IPR011006 CheY-like superfamily THII_1396 IPR003607 HD/PDEase domain THII_1396 IPR001789 Signal transduction response regulator, receiver domain THII_1397 IPR001564 Nucleoside diphosphate kinase THII_1397 IPR034907 Nucleoside diphosphate kinase-like domain THII_1397 IPR023005 Nucleoside diphosphate kinase, active site THII_1397 IPR036850 Nucleoside diphosphate kinase-like domain superfamily THII_1398 IPR027492 Dual-specificity RNA methyltransferase RlmN THII_1398 IPR013785 Aldolase-type TIM barrel THII_1398 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr THII_1398 IPR007197 Radical SAM THII_1398 IPR040072 Methyltransferase (Class A) THII_1400 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THII_1400 IPR025194 Domain of unknown function DUF4115 THII_1400 IPR001387 Cro/C1-type helix-turn-helix domain THII_1401 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type THII_1401 IPR011005 Dihydropteroate synthase-like THII_1401 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial THII_1404 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain THII_1404 IPR023045 Molybdenum cofactor biosynthesis C THII_1404 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily THII_1406 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1406 IPR011545 DEAD/DEAH box helicase domain THII_1406 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_1406 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site THII_1406 IPR001650 Helicase, C-terminal THII_1406 IPR014014 RNA helicase, DEAD-box type, Q motif THII_1406 IPR028622 ATP-dependent RNA helicase RhlE THII_1411 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily THII_1411 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily THII_1411 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain THII_1411 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal THII_1411 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria THII_1411 IPR009000 Translation protein, beta-barrel domain superfamily THII_1411 IPR003156 DHHA1 domain THII_1411 IPR002318 Alanine-tRNA ligase, class IIc THII_1411 IPR012947 Threonyl/alanyl tRNA synthetase, SAD THII_1412 IPR036390 Winged helix DNA-binding domain superfamily THII_1412 IPR003783 Regulatory protein RecX THII_1412 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1413 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1413 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain THII_1413 IPR023400 DNA recombination and repair protein RecA, C-terminal THII_1413 IPR003593 AAA+ ATPase domain THII_1413 IPR006141 Intein N-terminal splicing region THII_1413 IPR004042 Intein DOD homing endonuclease THII_1413 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface THII_1413 IPR027434 Homing endonuclease THII_1413 IPR036844 Hint domain superfamily THII_1413 IPR003587 Hint domain N-terminal THII_1413 IPR003586 Hint domain C-terminal THII_1413 IPR020584 DNA recombination/repair protein RecA, conserved site THII_1413 IPR013765 DNA recombination and repair protein RecA THII_1413 IPR004860 Homing endonuclease, LAGLIDADG THII_1413 IPR030934 Intein C-terminal splicing region THII_1418 IPR023299 P-type ATPase, cytoplasmic domain N THII_1418 IPR001757 P-type ATPase THII_1418 IPR036412 HAD-like superfamily THII_1418 IPR008250 P-type ATPase, A domain superfamily THII_1418 IPR006122 Heavy metal-associated domain, copper ion-binding THII_1418 IPR006121 Heavy metal-associated domain, HMA THII_1418 IPR036163 Heavy metal-associated domain superfamily THII_1418 IPR027256 P-type ATPase, subfamily IB THII_1418 IPR017969 Heavy-metal-associated, conserved site THII_1418 IPR023298 P-type ATPase, transmembrane domain superfamily THII_1418 IPR018303 P-type ATPase, phosphorylation site THII_1418 IPR023214 HAD superfamily THII_1420 IPR001926 Pyridoxal-phosphate dependent enzyme THII_1420 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THII_1420 IPR023026 Tryptophan synthase beta chain/beta chain-like THII_1420 IPR006316 Tryptophan synthase, beta chain-like THII_1420 IPR006654 Tryptophan synthase, beta chain THII_1420 IPR006653 Tryptophan synthase, beta chain, conserved site THII_1424 IPR004368 Translation initiation factor IF-1 THII_1424 IPR012340 Nucleic acid-binding, OB-fold THII_1424 IPR006196 RNA-binding domain, S1, IF1 type THII_1424 IPR022967 RNA-binding domain, S1 THII_1425 IPR017867 Protein-tyrosine phosphatase, low molecular weight THII_1425 IPR023485 Phosphotyrosine protein phosphatase I THII_1425 IPR036196 Phosphotyrosine protein phosphatase I superfamily THII_1426 IPR005651 Trm112-like THII_1427 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1427 IPR003758 Tetraacyldisaccharide 4'-kinase THII_1428 IPR003400 Biopolymer transport protein ExbD/TolR THII_1429 IPR002898 MotA/TolQ/ExbB proton channel THII_1430 IPR006283 Thiamine-monophosphate kinase THII_1430 IPR036921 PurM-like, N-terminal domain superfamily THII_1430 IPR016188 PurM-like, N-terminal domain THII_1430 IPR036676 PurM-like, C-terminal domain superfamily THII_1430 IPR010918 PurM-like, C-terminal domain THII_1431 IPR038770 Sodium/solute symporter superfamily THII_1431 IPR004771 K+/H+ exchanger THII_1431 IPR006153 Cation/H+ exchanger THII_1435 IPR025714 Methyltransferase domain THII_1435 IPR018773 Methyltransferase regulatory domain, predicted THII_1435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1438 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type THII_1438 IPR012340 Nucleic acid-binding, OB-fold THII_1438 IPR029351 GAD domain THII_1438 IPR004115 GAD-like domain superfamily THII_1438 IPR004524 Aspartate-tRNA ligase, type 1 THII_1438 IPR006195 Aminoacyl-tRNA synthetase, class II THII_1438 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) THII_1438 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb THII_1441 IPR001672 Phosphoglucose isomerase (PGI) THII_1441 IPR023096 Phosphoglucose isomerase, C-terminal THII_1441 IPR018189 Phosphoglucose isomerase, conserved site THII_1441 IPR035476 Phosphoglucose isomerase, SIS domain 1 THII_1441 IPR035482 Phosphoglucose isomerase, SIS domain 2 THII_1442 IPR003385 Glycoside hydrolase, family 77 THII_1442 IPR017853 Glycoside hydrolase superfamily THII_1444 IPR005835 Nucleotidyl transferase domain THII_1444 IPR011831 Glucose-1-phosphate adenylyltransferase THII_1444 IPR029044 Nucleotide-diphospho-sugar transferases THII_1444 IPR011004 Trimeric LpxA-like superfamily THII_1444 IPR005836 ADP-glucose pyrophosphorylase, conserved site THII_1444 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial THII_1445 IPR015590 Aldehyde dehydrogenase domain THII_1445 IPR016163 Aldehyde dehydrogenase, C-terminal THII_1445 IPR016161 Aldehyde/histidinol dehydrogenase THII_1445 IPR016160 Aldehyde dehydrogenase, cysteine active site THII_1445 IPR029510 Aldehyde dehydrogenase, glutamic acid active site THII_1445 IPR016162 Aldehyde dehydrogenase, N-terminal THII_1445 IPR010102 Succinate semialdehyde dehydrogenase THII_1450 IPR006314 Dyp-type peroxidase THII_1450 IPR011008 Dimeric alpha-beta barrel THII_1454 IPR011009 Protein kinase-like domain superfamily THII_1454 IPR005543 PASTA domain THII_1454 IPR000719 Protein kinase domain THII_1454 IPR017441 Protein kinase, ATP binding site THII_1454 IPR008271 Serine/threonine-protein kinase, active site THII_1455 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase THII_1455 IPR029787 Nucleotide cyclase THII_1455 IPR003660 HAMP domain THII_1457 IPR013078 Histidine phosphatase superfamily, clade-1 THII_1457 IPR029033 Histidine phosphatase superfamily THII_1457 IPR004449 Phosphohistidine phosphatase SixA THII_1458 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_1458 IPR037493 Exodeoxyribonuclease III-like THII_1458 IPR005135 Endonuclease/exonuclease/phosphatase THII_1458 IPR020848 AP endonuclease 1, conserved site THII_1458 IPR020847 AP endonuclease 1, binding site THII_1458 IPR004808 AP endonuclease 1 THII_1459 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like THII_1459 IPR001431 Peptidase M16, zinc-binding site THII_1459 IPR007863 Peptidase M16, C-terminal THII_1459 IPR011765 Peptidase M16, N-terminal THII_1460 IPR007863 Peptidase M16, C-terminal THII_1460 IPR011765 Peptidase M16, N-terminal THII_1460 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like THII_1460 IPR001431 Peptidase M16, zinc-binding site THII_1461 IPR005222 Competence protein ComF THII_1461 IPR000836 Phosphoribosyltransferase domain THII_1461 IPR029057 Phosphoribosyltransferase-like THII_1463 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 THII_1463 IPR006686 Mechanosensitive ion channel MscS, conserved site THII_1463 IPR011066 Mechanosensitive ion channel MscS, C-terminal THII_1463 IPR024393 Mechanosensitive ion channel MscS, porin domain THII_1463 IPR006685 Mechanosensitive ion channel MscS THII_1463 IPR025692 Mechanosensitive ion channel inner membrane domain 1 THII_1463 IPR023408 Mechanosensitive ion channel MscS domain superfamily THII_1463 IPR010920 LSM domain superfamily THII_1465 IPR005477 Deoxyxylulose-5-phosphate synthase THII_1465 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THII_1465 IPR005475 Transketolase-like, pyrimidine-binding domain THII_1465 IPR020826 Transketolase binding site THII_1465 IPR033248 Transketolase, C-terminal domain THII_1465 IPR005474 Transketolase, N-terminal THII_1465 IPR029061 Thiamin diphosphate-binding fold THII_1466 IPR022838 GTP cyclohydrolase FolE2 THII_1466 IPR003801 GTP cyclohydrolase FolE2/MptA THII_1471 IPR010055 Type II secretion system protein J THII_1471 IPR012902 Prokaryotic N-terminal methylation site THII_1472 IPR036249 Thioredoxin-like superfamily THII_1472 IPR017937 Thioredoxin, conserved site THII_1472 IPR005746 Thioredoxin THII_1472 IPR013766 Thioredoxin domain THII_1473 IPR006638 Elp3/MiaB/NifB THII_1473 IPR013785 Aldolase-type TIM barrel THII_1473 IPR007197 Radical SAM THII_1473 IPR003698 Lipoyl synthase THII_1474 IPR000544 Octanoyltransferase THII_1474 IPR020605 Octanoyltransferase, conserved site THII_1474 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain THII_1475 IPR020761 Uncharacterised protein family UPF0114, bacteria THII_1475 IPR005134 Uncharacterised protein family UPF0114 THII_1483 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_1483 IPR001036 Acriflavin resistance protein THII_1487 IPR008867 Thiazole synthase THII_1487 IPR033983 Thiazole synthase ThiG THII_1487 IPR003749 Sulfur carrier ThiS/MoaD-like THII_1487 IPR010035 ThiS, thiamine-biosynthesis THII_1487 IPR012675 Beta-grasp domain superfamily THII_1487 IPR013785 Aldolase-type TIM barrel THII_1487 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THII_1488 IPR029044 Nucleotide-diphospho-sugar transferases THII_1488 IPR001173 Glycosyltransferase 2-like THII_1489 IPR020818 GroES chaperonin family THII_1489 IPR037124 GroES chaperonin superfamily THII_1489 IPR018369 Chaperonin GroES, conserved site THII_1489 IPR011032 GroES-like superfamily THII_1490 IPR027410 TCP-1-like chaperonin intermediate domain superfamily THII_1490 IPR027413 GroEL-like equatorial domain superfamily THII_1490 IPR027409 GroEL-like apical domain superfamily THII_1490 IPR002423 Chaperonin Cpn60/TCP-1 family THII_1490 IPR001844 Chaperonin Cpn60 THII_1490 IPR018370 Chaperonin Cpn60, conserved site THII_1491 IPR026046 UbiA prenyltransferase domain containing protein 1 THII_1491 IPR000537 UbiA prenyltransferase family THII_1491 IPR011937 2-carboxy-1,4-naphthoquinone phytyltransferase THII_1493 IPR004480 Monothiol glutaredoxin-related THII_1493 IPR002109 Glutaredoxin THII_1493 IPR036249 Thioredoxin-like superfamily THII_1493 IPR014434 Monothiol glutaredoxin THII_1493 IPR033658 Glutaredoxin, PICOT-like THII_1494 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase THII_1494 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme THII_1494 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_1494 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_1494 IPR015424 Pyridoxal phosphate-dependent transferase THII_1495 IPR012675 Beta-grasp domain superfamily THII_1495 IPR002912 ACT domain THII_1495 IPR003607 HD/PDEase domain THII_1495 IPR033655 RelA, TGS domain THII_1495 IPR007685 RelA/SpoT THII_1495 IPR004095 TGS THII_1495 IPR012676 TGS-like THII_1495 IPR004811 RelA/SpoT family THII_1500 IPR036909 Cytochrome c-like domain superfamily THII_1500 IPR009056 Cytochrome c-like domain THII_1500 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase THII_1500 IPR004852 Di-haem cytochrome c peroxidase THII_1503 IPR011527 ABC transporter type 1, transmembrane domain THII_1503 IPR039421 Type I protein exporter THII_1503 IPR003593 AAA+ ATPase domain THII_1503 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1503 IPR003439 ABC transporter-like THII_1503 IPR036640 ABC transporter type 1, transmembrane domain superfamily THII_1503 IPR017871 ABC transporter, conserved site THII_1510 IPR025841 Circularly permuted ATP-grasp type 2 THII_1510 IPR016450 Uncharacterised conserved protein UCP005522 THII_1512 IPR011990 Tetratricopeptide-like helical domain superfamily THII_1512 IPR030873 Beta-barrel assembly-enhancing protease THII_1512 IPR001915 Peptidase M48 THII_1512 IPR011716 Tetratricopeptide TPR-3 THII_1514 IPR001789 Signal transduction response regulator, receiver domain THII_1514 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1514 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1514 IPR036641 HPT domain superfamily THII_1514 IPR019247 Histidine kinase BarA, N-terminal THII_1514 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1514 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1514 IPR005467 Histidine kinase domain THII_1514 IPR003594 Histidine kinase/HSP90-like ATPase THII_1514 IPR003660 HAMP domain THII_1514 IPR011006 CheY-like superfamily THII_1514 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1517 IPR003607 HD/PDEase domain THII_1517 IPR021800 Domain of unknown function DUF3369 THII_1517 IPR037522 HD-GYP domain THII_1517 IPR001789 Signal transduction response regulator, receiver domain THII_1517 IPR011006 CheY-like superfamily THII_1520 IPR002686 Transposase IS200-like THII_1520 IPR036515 Transposase IS200-like superfamily THII_1521 IPR001501 Nickel-dependent hydrogenase, large subunit THII_1521 IPR029014 [NiFe]-hydrogenase, large subunit THII_1521 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site THII_1522 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily THII_1522 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THII_1523 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THII_1523 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit THII_1523 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site THII_1523 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding THII_1523 IPR036010 2Fe-2S ferredoxin-like superfamily THII_1524 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily THII_1524 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal THII_1524 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain THII_1524 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily THII_1524 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain THII_1524 IPR036249 Thioredoxin-like superfamily THII_1524 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site THII_1525 IPR011659 WD40-like Beta Propeller THII_1525 IPR011042 Six-bladed beta-propeller, TolB-like THII_1525 IPR014167 Tol-Pal system protein TolB THII_1525 IPR007195 TolB, N-terminal THII_1525 IPR036752 TolB, N-terminal domain superfamily THII_1528 IPR014168 Tol-Pal system protein TolR THII_1528 IPR003400 Biopolymer transport protein ExbD/TolR THII_1529 IPR002898 MotA/TolQ/ExbB proton channel THII_1529 IPR014163 Tol-Pal system, TolQ THII_1530 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site THII_1530 IPR029069 HotDog domain superfamily THII_1530 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family THII_1530 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase THII_1530 IPR006683 Thioesterase domain THII_1531 IPR041445 RuvB, AAA lid domain THII_1531 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1531 IPR008824 RuvB-like P-loop domain THII_1531 IPR008823 RuvB C-terminal winged helix domain THII_1531 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1531 IPR003593 AAA+ ATPase domain THII_1531 IPR036390 Winged helix DNA-binding domain superfamily THII_1531 IPR004605 DNA helicase, Holliday junction RuvB-type THII_1532 IPR036909 Cytochrome c-like domain superfamily THII_1532 IPR024167 Cytochrome c4-like THII_1532 IPR009056 Cytochrome c-like domain THII_1533 IPR036249 Thioredoxin-like superfamily THII_1533 IPR017937 Thioredoxin, conserved site THII_1533 IPR013766 Thioredoxin domain THII_1533 IPR001853 DSBA-like thioredoxin domain THII_1533 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL THII_1536 IPR006175 YjgF/YER057c/UK114 family THII_1536 IPR006056 RidA family THII_1536 IPR035959 RutC-like superfamily THII_1536 IPR019897 RidA, conserved site THII_1537 IPR004609 ATP-dependent DNA helicase RecG THII_1537 IPR011545 DEAD/DEAH box helicase domain THII_1537 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_1537 IPR001650 Helicase, C-terminal THII_1537 IPR012340 Nucleic acid-binding, OB-fold THII_1537 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1537 IPR033454 RecG, wedge domain THII_1539 IPR003362 Bacterial sugar transferase THII_1539 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ THII_1539 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase THII_1540 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily THII_1540 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB THII_1540 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1540 IPR000014 PAS domain THII_1540 IPR013767 PAS fold THII_1540 IPR036641 HPT domain superfamily THII_1540 IPR040642 Histidine kinase receptor ArcB, transmembrane domain THII_1540 IPR000700 PAS-associated, C-terminal THII_1540 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1540 IPR035965 PAS domain superfamily THII_1540 IPR005467 Histidine kinase domain THII_1540 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1540 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1540 IPR001789 Signal transduction response regulator, receiver domain THII_1540 IPR003594 Histidine kinase/HSP90-like ATPase THII_1540 IPR011006 CheY-like superfamily THII_1540 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1541 IPR016132 Phytochrome chromophore attachment domain THII_1541 IPR029787 Nucleotide cyclase THII_1541 IPR000160 GGDEF domain THII_1541 IPR029016 GAF-like domain superfamily THII_1541 IPR003018 GAF domain THII_1541 IPR013515 Phytochrome, central region THII_1541 IPR001633 EAL domain THII_1541 IPR001294 Phytochrome THII_1541 IPR035919 EAL domain superfamily THII_1542 IPR018212 Sodium/solute symporter, conserved site THII_1542 IPR001734 Sodium/solute symporter THII_1542 IPR011851 Sodium/proline symporter THII_1542 IPR038377 Sodium/glucose symporter superfamily THII_1543 IPR006225 Pseudouridine synthase, RluC/RluD THII_1543 IPR020103 Pseudouridine synthase, catalytic domain superfamily THII_1543 IPR036986 RNA-binding S4 domain superfamily THII_1543 IPR002942 RNA-binding S4 domain THII_1543 IPR006145 Pseudouridine synthase, RsuA/RluA THII_1543 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site THII_1544 IPR011990 Tetratricopeptide-like helical domain superfamily THII_1544 IPR039565 Outer membrane lipoprotein BamD-like THII_1544 IPR017689 Outer membrane protein assembly factor BamD THII_1546 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 THII_1546 IPR001567 Peptidase M3A/M3B catalytic domain THII_1547 IPR000811 Glycosyl transferase, family 35 THII_1547 IPR011833 Glycogen/starch/alpha-glucan phosphorylase THII_1547 IPR035090 Phosphorylase pyridoxal-phosphate attachment site THII_1548 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THII_1548 IPR003918 NADH:ubiquinone oxidoreductase THII_1549 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H THII_1549 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site THII_1554 IPR000873 AMP-dependent synthetase/ligase THII_1554 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain THII_1554 IPR011904 Acetate-CoA ligase THII_1554 IPR042099 AMP-dependent synthetase-like superfamily THII_1554 IPR020845 AMP-binding, conserved site THII_1554 IPR025110 AMP-binding enzyme, C-terminal domain THII_1562 IPR003700 Ketopantoate hydroxymethyltransferase THII_1562 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THII_1562 IPR040442 Pyruvate kinase-like domain superfamily THII_1563 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily THII_1563 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK THII_1564 IPR010206 Poly(A) polymerase I THII_1564 IPR002646 Poly A polymerase, head domain THII_1564 IPR025866 Polymerase A arginine-rich C-terminal domain THII_1564 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain THII_1565 IPR034704 L28p-like THII_1565 IPR026569 Ribosomal protein L28/L24 THII_1565 IPR037147 Ribosomal protein L28/L24 superfamily THII_1565 IPR001383 Ribosomal protein L28 THII_1566 IPR001451 Hexapeptide repeat THII_1566 IPR018357 Hexapeptide transferase, conserved site THII_1566 IPR042122 Serine acetyltransferase, N-terminal domain superfamily THII_1566 IPR005881 Serine O-acetyltransferase THII_1566 IPR011004 Trimeric LpxA-like superfamily THII_1567 IPR016193 Cytidine deaminase-like THII_1567 IPR003786 Sulfur carrier protein FdhD THII_1568 IPR013483 Molybdenum cofactor biosynthesis protein A THII_1568 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site THII_1568 IPR010505 Molybdenum cofactor synthesis C-terminal THII_1568 IPR006638 Elp3/MiaB/NifB THII_1568 IPR013785 Aldolase-type TIM barrel THII_1568 IPR007197 Radical SAM THII_1569 IPR018773 Methyltransferase regulatory domain, predicted THII_1569 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1569 IPR025714 Methyltransferase domain THII_1570 IPR011006 CheY-like superfamily THII_1570 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1570 IPR039420 Transcriptional regulatory protein WalR-like THII_1570 IPR001789 Signal transduction response regulator, receiver domain THII_1570 IPR001867 OmpR/PhoB-type DNA-binding domain THII_1571 IPR003018 GAF domain THII_1571 IPR029016 GAF-like domain superfamily THII_1571 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1571 IPR038318 KdpD, transmembrane domain superfamily THII_1571 IPR025201 Sensor protein KdpD, transmembrane domain THII_1571 IPR003594 Histidine kinase/HSP90-like ATPase THII_1571 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1571 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1571 IPR005467 Histidine kinase domain THII_1571 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal THII_1571 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1575 IPR012006 tRNA nucleotidyltransferase, proteobacteria THII_1575 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain THII_1575 IPR006674 HD domain THII_1575 IPR002646 Poly A polymerase, head domain THII_1575 IPR003607 HD/PDEase domain THII_1576 IPR010099 Epimerase family protein SDR39U1 THII_1576 IPR036291 NAD(P)-binding domain superfamily THII_1576 IPR001509 NAD-dependent epimerase/dehydratase THII_1576 IPR013549 Domain of unknown function DUF1731 THII_1583 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase THII_1583 IPR003660 HAMP domain THII_1583 IPR029787 Nucleotide cyclase THII_1585 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_1585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1585 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1585 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1585 IPR003594 Histidine kinase/HSP90-like ATPase THII_1585 IPR005467 Histidine kinase domain THII_1585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1592 IPR004147 UbiB domain THII_1592 IPR011009 Protein kinase-like domain superfamily THII_1592 IPR010232 Probable protein kinase UbiB THII_1595 IPR023576 UbiE/COQ5 methyltransferase, conserved site THII_1595 IPR004033 UbiE/COQ5 methyltransferase THII_1595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1597 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1597 IPR004491 Heat shock protein HslU THII_1597 IPR019489 Clp ATPase, C-terminal THII_1597 IPR003959 ATPase, AAA-type, core THII_1597 IPR003593 AAA+ ATPase domain THII_1598 IPR023333 Proteasome B-type subunit THII_1598 IPR022281 ATP-dependent protease, HslV subunit THII_1598 IPR001353 Proteasome, subunit alpha/beta THII_1598 IPR029055 Nucleophile aminohydrolases, N-terminal THII_1599 IPR011009 Protein kinase-like domain superfamily THII_1599 IPR005280 Homoserine kinase, type II THII_1599 IPR002575 Aminoglycoside phosphotransferase THII_1600 IPR031100 LOG family THII_1600 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG THII_1602 IPR004498 Ribosomal protein L11 methyltransferase THII_1602 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1605 IPR011527 ABC transporter type 1, transmembrane domain THII_1605 IPR010132 ATPase, type I secretion system, HlyB THII_1605 IPR003593 AAA+ ATPase domain THII_1605 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1605 IPR005074 Peptidase C39, bacteriocin processing THII_1605 IPR039395 Peptidase C39-like A THII_1605 IPR039421 Type I protein exporter THII_1605 IPR017871 ABC transporter, conserved site THII_1605 IPR003439 ABC transporter-like THII_1605 IPR036640 ABC transporter type 1, transmembrane domain superfamily THII_1615 IPR000883 Cytochrome c oxidase subunit I THII_1615 IPR023616 Cytochrome c oxidase-like, subunit I domain THII_1615 IPR036927 Cytochrome c oxidase-like, subunit I superfamily THII_1615 IPR004677 Cytochrome c oxidase cbb3-type, subunit I THII_1615 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site THII_1618 IPR009056 Cytochrome c-like domain THII_1618 IPR004678 Cytochrome c oxidase cbb3-type, subunit III THII_1618 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal THII_1618 IPR008168 Cytochrome c, class IC THII_1618 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily THII_1618 IPR036909 Cytochrome c-like domain superfamily THII_1619 IPR025299 CstA, C-terminal domain THII_1619 IPR003706 CstA, N-terminal domain THII_1624 IPR001789 Signal transduction response regulator, receiver domain THII_1624 IPR016032 Signal transduction response regulator, C-terminal effector THII_1624 IPR001867 OmpR/PhoB-type DNA-binding domain THII_1624 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1624 IPR039420 Transcriptional regulatory protein WalR-like THII_1624 IPR011006 CheY-like superfamily THII_1625 IPR003660 HAMP domain THII_1625 IPR003594 Histidine kinase/HSP90-like ATPase THII_1625 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1625 IPR005467 Histidine kinase domain THII_1625 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1625 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1625 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1629 IPR006664 Outer membrane protein, bacterial THII_1629 IPR000498 Outer membrane protein OmpA-like, transmembrane domain THII_1629 IPR036737 OmpA-like domain superfamily THII_1629 IPR006665 OmpA-like domain THII_1629 IPR002368 Outer membrane protein, OmpA THII_1629 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel THII_1629 IPR006690 Outer membrane protein, OmpA-like, conserved site THII_1631 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1631 IPR005467 Histidine kinase domain THII_1631 IPR011006 CheY-like superfamily THII_1631 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1631 IPR015387 LuxQ, periplasmic THII_1631 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1631 IPR003594 Histidine kinase/HSP90-like ATPase THII_1631 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1631 IPR001789 Signal transduction response regulator, receiver domain THII_1631 IPR029151 Periplasmic sensor-like domain superfamily THII_1632 IPR001789 Signal transduction response regulator, receiver domain THII_1632 IPR029787 Nucleotide cyclase THII_1632 IPR011006 CheY-like superfamily THII_1632 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase THII_1633 IPR002695 Bifunctional purine biosynthesis protein PurH-like THII_1633 IPR036914 Methylglyoxal synthase-like domain superfamily THII_1633 IPR016193 Cytidine deaminase-like THII_1633 IPR024051 AICAR transformylase, duplicated domain superfamily THII_1633 IPR011607 Methylglyoxal synthase-like domain THII_1634 IPR000760 Inositol monophosphatase-like THII_1634 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ THII_1634 IPR020550 Inositol monophosphatase, conserved site THII_1634 IPR020583 Inositol monophosphatase, metal-binding site THII_1635 IPR036165 YefM-like superfamily THII_1635 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_1646 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_1646 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase THII_1646 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal THII_1646 IPR016166 FAD-binding domain, PCMH-type THII_1646 IPR006094 FAD linked oxidase, N-terminal THII_1646 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily THII_1646 IPR016167 FAD-binding, type PCMH, subdomain 1 THII_1646 IPR036318 FAD-binding, type PCMH-like superfamily THII_1649 IPR005886 UDP-glucose 4-epimerase THII_1649 IPR036291 NAD(P)-binding domain superfamily THII_1649 IPR016040 NAD(P)-binding domain THII_1658 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA THII_1658 IPR001173 Glycosyltransferase 2-like THII_1658 IPR029044 Nucleotide-diphospho-sugar transferases THII_1663 IPR003593 AAA+ ATPase domain THII_1663 IPR003439 ABC transporter-like THII_1663 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1663 IPR017871 ABC transporter, conserved site THII_1664 IPR003593 AAA+ ATPase domain THII_1664 IPR039421 Type I protein exporter THII_1664 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1664 IPR017871 ABC transporter, conserved site THII_1664 IPR003439 ABC transporter-like THII_1664 IPR036640 ABC transporter type 1, transmembrane domain superfamily THII_1664 IPR011527 ABC transporter type 1, transmembrane domain THII_1673 IPR006656 Molybdopterin oxidoreductase THII_1673 IPR006657 Molybdopterin dinucleotide-binding domain THII_1673 IPR037943 Nitrate reductase alpha subunit-like, MopB domain THII_1673 IPR017840 DMSO reductase family, type II, molybdopterin subunit THII_1673 IPR009010 Aspartate decarboxylase-like domain superfamily THII_1673 IPR006311 Twin-arginine translocation pathway, signal sequence THII_1673 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain THII_1674 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_1674 IPR017839 DMSO reductase family, type II, iron-sulphur subunit THII_1685 IPR002541 Cytochrome c assembly protein THII_1688 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like THII_1688 IPR011765 Peptidase M16, N-terminal THII_1688 IPR007863 Peptidase M16, C-terminal THII_1688 IPR013578 Peptidase M16C associated THII_1691 IPR023753 FAD/NAD(P)-binding domain THII_1691 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily THII_1691 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding THII_1691 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily THII_1691 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_1691 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1691 IPR006311 Twin-arginine translocation pathway, signal sequence THII_1692 IPR009056 Cytochrome c-like domain THII_1692 IPR036909 Cytochrome c-like domain superfamily THII_1692 IPR024167 Cytochrome c4-like THII_1694 IPR005126 NapC/NirT cytochrome c, N-terminal THII_1694 IPR024717 Denitrification system component NapC/NirT/NrfH THII_1694 IPR038266 NapC/NirT cytochrome c superfamily THII_1694 IPR036280 Multiheme cytochrome superfamily THII_1694 IPR011031 Multihaem cytochrome THII_1695 IPR013446 Glucose-1-phosphate cytidylyltransferase THII_1695 IPR005835 Nucleotidyl transferase domain THII_1695 IPR029044 Nucleotide-diphospho-sugar transferases THII_1696 IPR016040 NAD(P)-binding domain THII_1696 IPR013445 CDP-glucose 4,6-dehydratase THII_1696 IPR036291 NAD(P)-binding domain superfamily THII_1697 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_1697 IPR015424 Pyridoxal phosphate-dependent transferase THII_1697 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_1697 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_1698 IPR036291 NAD(P)-binding domain superfamily THII_1698 IPR001509 NAD-dependent epimerase/dehydratase THII_1699 IPR036291 NAD(P)-binding domain superfamily THII_1699 IPR016040 NAD(P)-binding domain THII_1701 IPR001173 Glycosyltransferase 2-like THII_1701 IPR029044 Nucleotide-diphospho-sugar transferases THII_1707 IPR001173 Glycosyltransferase 2-like THII_1707 IPR029044 Nucleotide-diphospho-sugar transferases THII_1708 IPR001296 Glycosyl transferase, family 1 THII_1708 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THII_1709 IPR017814 Mycothiol biosynthesis protein, MshA THII_1709 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THII_1709 IPR001296 Glycosyl transferase, family 1 THII_1710 IPR018357 Hexapeptide transferase, conserved site THII_1710 IPR039369 Galactoside O-acetyltransferase LacA-like THII_1710 IPR001451 Hexapeptide repeat THII_1710 IPR024688 Maltose/galactoside acetyltransferase THII_1710 IPR011004 Trimeric LpxA-like superfamily THII_1711 IPR010233 Ubiquinone biosynthesis O-methyltransferase THII_1711 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1714 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THII_1714 IPR001296 Glycosyl transferase, family 1 THII_1714 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI THII_1715 IPR002828 Survival protein SurE-like phosphatase/nucleotidase THII_1715 IPR030048 Survival protein SurE THII_1715 IPR036523 SurE-like phosphatase/nucleotidase superfamily THII_1716 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_1716 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_1716 IPR012257 Glycolate oxidase, iron-sulphur subunit THII_1716 IPR009051 Alpha-helical ferredoxin THII_1716 IPR004017 Cysteine-rich domain THII_1717 IPR011032 GroES-like superfamily THII_1717 IPR013149 Alcohol dehydrogenase, C-terminal THII_1717 IPR013154 Alcohol dehydrogenase, N-terminal THII_1717 IPR036291 NAD(P)-binding domain superfamily THII_1717 IPR020843 Polyketide synthase, enoylreductase domain THII_1717 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site THII_1718 IPR009097 Cyclic phosphodiesterase THII_1718 IPR014051 Phosphoesterase, HXTX THII_1718 IPR004175 RNA 2',3'-cyclic phosphodiesterase THII_1720 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site THII_1720 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1720 IPR023753 FAD/NAD(P)-binding domain THII_1720 IPR005982 Thioredoxin reductase THII_1721 IPR042094 Type II secretion system F domain superfamily THII_1721 IPR003004 GspF/PilC family THII_1721 IPR018076 Type II secretion system F domain THII_1721 IPR001992 Type II secretion system conserved site THII_1727 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1727 IPR025103 Protein of unknown function DUF4011 THII_1727 IPR041677 DNA2/NAM7 helicase, AAA domain THII_1727 IPR041679 DNA2/NAM7 helicase-like, AAA domain THII_1727 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1727 IPR025103 Protein of unknown function DUF4011 THII_1727 IPR041677 DNA2/NAM7 helicase, AAA domain THII_1727 IPR041679 DNA2/NAM7 helicase-like, AAA domain THII_1734 IPR003835 Glycosyl transferase, family 19 THII_1735 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal THII_1735 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily THII_1735 IPR011004 Trimeric LpxA-like superfamily THII_1735 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase THII_1735 IPR018357 Hexapeptide transferase, conserved site THII_1735 IPR001451 Hexapeptide repeat THII_1736 IPR029069 HotDog domain superfamily THII_1736 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ THII_1736 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ THII_1737 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD THII_1737 IPR011004 Trimeric LpxA-like superfamily THII_1737 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region THII_1737 IPR018357 Hexapeptide transferase, conserved site THII_1737 IPR001451 Hexapeptide repeat THII_1739 IPR000184 Bacterial surface antigen (D15) THII_1739 IPR010827 POTRA domain, BamA/TamA-like THII_1739 IPR034746 POTRA domain THII_1739 IPR023707 Outer membrane protein assembly factor BamA THII_1739 IPR039910 Surface antigen D15-like THII_1740 IPR008915 Peptidase M50 THII_1740 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase THII_1740 IPR036034 PDZ superfamily THII_1740 IPR041489 PDZ domain 6 THII_1740 IPR001478 PDZ domain THII_1741 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal THII_1741 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase THII_1741 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal THII_1741 IPR026877 DXP reductoisomerase C-terminal domain THII_1741 IPR036169 DXP reductoisomerase, C-terminal domain superfamily THII_1741 IPR036291 NAD(P)-binding domain superfamily THII_1742 IPR000374 Phosphatidate cytidylyltransferase THII_1743 IPR001441 Decaprenyl diphosphate synthase-like THII_1743 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site THII_1743 IPR036424 Decaprenyl diphosphate synthase-like superfamily THII_1744 IPR036191 RRF superfamily THII_1744 IPR002661 Ribosome recycling factor THII_1744 IPR023584 Ribosome recycling factor domain THII_1745 IPR036393 Acetylglutamate kinase-like superfamily THII_1745 IPR001048 Aspartate/glutamate/uridylate kinase THII_1745 IPR011817 Uridylate kinase THII_1745 IPR015963 Uridylate kinase, bacteria THII_1746 IPR001816 Translation elongation factor EFTs/EF1B THII_1746 IPR036402 Elongation factor Ts, dimerisation domain superfamily THII_1746 IPR009060 UBA-like superfamily THII_1746 IPR018101 Translation elongation factor Ts, conserved site THII_1746 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation THII_1747 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid THII_1747 IPR018130 Ribosomal protein S2, conserved site THII_1747 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily THII_1747 IPR001865 Ribosomal protein S2 THII_1748 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 THII_1748 IPR001714 Peptidase M24, methionine aminopeptidase THII_1748 IPR000994 Peptidase M24 THII_1748 IPR036005 Creatinase/aminopeptidase-like THII_1749 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF THII_1749 IPR000594 THIF-type NAD/FAD binding fold THII_1749 IPR035985 Ubiquitin-activating enzyme THII_1750 IPR012675 Beta-grasp domain superfamily THII_1750 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THII_1750 IPR003749 Sulfur carrier ThiS/MoaD-like THII_1751 IPR003448 Molybdopterin biosynthesis MoaE THII_1751 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily THII_1754 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type THII_1754 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal THII_1754 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation THII_1754 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THII_1754 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal THII_1754 IPR017476 UDP-glucose/GDP-mannose dehydrogenase THII_1754 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily THII_1754 IPR036291 NAD(P)-binding domain superfamily THII_1755 IPR035985 Ubiquitin-activating enzyme THII_1755 IPR012730 Molybdopterin synthase sulfurylase MoeB THII_1755 IPR000594 THIF-type NAD/FAD binding fold THII_1756 IPR005618 Outer membrane protein, OmpW THII_1756 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel THII_1761 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site THII_1761 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type THII_1764 IPR042174 DNA-binding RecF, domain 2 THII_1764 IPR003395 RecF/RecN/SMC, N-terminal THII_1764 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1764 IPR018078 DNA-binding, RecF, conserved site THII_1764 IPR001238 DNA-binding, RecF THII_1765 IPR038009 GlmU, C-terminal LbH domain THII_1765 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase THII_1765 IPR001451 Hexapeptide repeat THII_1765 IPR025877 MobA-like NTP transferase THII_1765 IPR029044 Nucleotide-diphospho-sugar transferases THII_1765 IPR011004 Trimeric LpxA-like superfamily THII_1770 IPR018490 Cyclic nucleotide-binding-like THII_1770 IPR036390 Winged helix DNA-binding domain superfamily THII_1770 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1770 IPR018335 Transcription regulator HTH, Crp-type, conserved site THII_1770 IPR014710 RmlC-like jelly roll fold THII_1770 IPR000595 Cyclic nucleotide-binding domain THII_1770 IPR012318 Crp-type HTH domain THII_1772 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_1773 IPR023465 Riboflavin kinase domain superfamily THII_1773 IPR015864 FAD synthetase THII_1773 IPR023468 Riboflavin kinase THII_1773 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic THII_1773 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1773 IPR002606 Riboflavin kinase, bacterial THII_1776 IPR003018 GAF domain THII_1776 IPR013515 Phytochrome, central region THII_1776 IPR001294 Phytochrome THII_1776 IPR000160 GGDEF domain THII_1776 IPR035919 EAL domain superfamily THII_1776 IPR029787 Nucleotide cyclase THII_1776 IPR001633 EAL domain THII_1776 IPR029016 GAF-like domain superfamily THII_1776 IPR016132 Phytochrome chromophore attachment domain THII_1777 IPR013767 PAS fold THII_1777 IPR035965 PAS domain superfamily THII_1777 IPR000014 PAS domain THII_1777 IPR041328 ResE, histidine kinase sensor domain THII_1777 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1777 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1777 IPR005467 Histidine kinase domain THII_1777 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1777 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1777 IPR003594 Histidine kinase/HSP90-like ATPase THII_1777 IPR003660 HAMP domain THII_1778 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site THII_1778 IPR006657 Molybdopterin dinucleotide-binding domain THII_1778 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain THII_1778 IPR009010 Aspartate decarboxylase-like domain superfamily THII_1778 IPR007419 BFD-like [2Fe-2S]-binding domain THII_1778 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain THII_1778 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily THII_1778 IPR006656 Molybdopterin oxidoreductase THII_1781 IPR017941 Rieske [2Fe-2S] iron-sulphur domain THII_1781 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type THII_1781 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily THII_1782 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily THII_1782 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1782 IPR023753 FAD/NAD(P)-binding domain THII_1782 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily THII_1782 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain THII_1782 IPR007419 BFD-like [2Fe-2S]-binding domain THII_1782 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal THII_1782 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB THII_1782 IPR017121 Nitrite reductase [NAD(P)H], large subunit THII_1782 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain THII_1782 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily THII_1782 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site THII_1783 IPR011701 Major facilitator superfamily THII_1783 IPR020846 Major facilitator superfamily domain THII_1783 IPR036259 MFS transporter superfamily THII_1783 IPR004737 Nitrate transporter THII_1784 IPR003439 ABC transporter-like THII_1784 IPR003593 AAA+ ATPase domain THII_1784 IPR017871 ABC transporter, conserved site THII_1784 IPR005890 Nitrate transport ATP-binding subunit C/D THII_1784 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1785 IPR005561 ANTAR domain THII_1785 IPR011006 CheY-like superfamily THII_1785 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1785 IPR013587 Nitrate/nitrite sensing protein THII_1785 IPR010910 Nitrate/nitrite sensing protein, bacterial THII_1789 IPR003439 ABC transporter-like THII_1789 IPR003593 AAA+ ATPase domain THII_1789 IPR017871 ABC transporter, conserved site THII_1789 IPR015863 ABC transporter, hemin import, HmuV THII_1789 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1790 IPR037294 ABC transporter, BtuC-like THII_1790 IPR000522 ABC transporter, permease protein, BtuC-like THII_1794 IPR036526 Carbon-nitrogen hydrolase superfamily THII_1794 IPR004563 Apolipoprotein N-acyltransferase THII_1794 IPR003010 Carbon-nitrogen hydrolase THII_1796 IPR005170 Transporter-associated domain THII_1796 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_1796 IPR036318 FAD-binding, type PCMH-like superfamily THII_1796 IPR000644 CBS domain THII_1797 IPR002036 Endoribonuclease YbeY THII_1797 IPR023091 Metalloprotease catalytic domain superfamily, predicted THII_1797 IPR020549 Endoribonuclease YbeY, conserved site THII_1798 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1798 IPR003714 PhoH-like protein THII_1799 IPR038135 Methylthiotransferase, N-terminal domain superfamily THII_1799 IPR013848 Methylthiotransferase, N-terminal THII_1799 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB THII_1799 IPR007197 Radical SAM THII_1799 IPR023404 Radical SAM, alpha/beta horseshoe THII_1799 IPR002792 TRAM domain THII_1799 IPR006638 Elp3/MiaB/NifB THII_1799 IPR020612 Methylthiotransferase, conserved site THII_1799 IPR005839 Methylthiotransferase THII_1800 IPR011862 Phosphate binding protein THII_1800 IPR024370 PBP domain THII_1801 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type THII_1801 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase THII_1801 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1801 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal THII_1802 IPR023695 Thiosulfate sulfurtransferase, bacterial THII_1802 IPR036873 Rhodanese-like domain superfamily THII_1802 IPR001763 Rhodanese-like domain THII_1804 IPR005259 Primosomal protein N' THII_1804 IPR041222 Primosomal protein N', 3' DNA-binding domain THII_1804 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily THII_1804 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_1804 IPR011545 DEAD/DEAH box helicase domain THII_1804 IPR001650 Helicase, C-terminal THII_1804 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1804 IPR041236 Primosomal protein N, C-terminal domain THII_1804 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain THII_1806 IPR005977 Nitrogenase iron protein NifH THII_1806 IPR000392 NifH/frxC family THII_1806 IPR030655 NifH/chlL conserved site THII_1806 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1807 IPR010143 Nitrogenase component 1, alpha chain THII_1807 IPR000510 Nitrogenase/oxidoreductase, component 1 THII_1807 IPR005972 Nitrogenase molybdenum-iron protein alpha chain THII_1807 IPR000318 Nitrogenase component 1, conserved site THII_1808 IPR005976 Nitrogenase molybdenum-iron protein beta chain THII_1808 IPR000510 Nitrogenase/oxidoreductase, component 1 THII_1808 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal THII_1808 IPR000318 Nitrogenase component 1, conserved site THII_1809 IPR024044 NifT/FixU barrel-like domain superfamily THII_1809 IPR009727 NifT/FixU THII_1810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_1810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_1811 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis THII_1811 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THII_1811 IPR031763 Dinitrogenase iron-molybdenum cofactor, N-terminal THII_1811 IPR038127 NafY, N-terminal domain superfamily THII_1811 IPR034169 NifX-like domain THII_1813 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE THII_1813 IPR000318 Nitrogenase component 1, conserved site THII_1813 IPR000510 Nitrogenase/oxidoreductase, component 1 THII_1814 IPR000510 Nitrogenase/oxidoreductase, component 1 THII_1814 IPR000318 Nitrogenase component 1, conserved site THII_1814 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein THII_1815 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis THII_1815 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THII_1815 IPR034169 NifX-like domain THII_1817 IPR004952 Uncharacterised protein family UPF0460 THII_1823 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain THII_1823 IPR036008 Aconitase, iron-sulfur domain THII_1823 IPR004430 3-isopropylmalate dehydratase, large subunit THII_1823 IPR033941 3-Isopropylmalate dehydratase, catalytic domain THII_1823 IPR018136 Aconitase family, 4Fe-4S cluster binding site THII_1823 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 THII_1825 IPR012337 Ribonuclease H-like superfamily THII_1825 IPR022898 Ribonuclease HII THII_1825 IPR036397 Ribonuclease H superfamily THII_1825 IPR001352 Ribonuclease HII/HIII THII_1825 IPR024567 Ribonuclease HII/HIII domain THII_1828 IPR036192 Cell division protein ZapA-like superfamily THII_1828 IPR007838 Cell division protein ZapA-like THII_1829 IPR003593 AAA+ ATPase domain THII_1829 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1829 IPR006321 Pilus retraction protein PilT THII_1829 IPR001482 Type II/IV secretion system protein THII_1831 IPR036515 Transposase IS200-like superfamily THII_1831 IPR002686 Transposase IS200-like THII_1832 IPR005861 Histidinol-phosphate aminotransferase family THII_1832 IPR015424 Pyridoxal phosphate-dependent transferase THII_1832 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_1832 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_1832 IPR004839 Aminotransferase, class I/classII THII_1834 IPR018522 DNA topoisomerase, type IIA, conserved site THII_1834 IPR006171 TOPRIM domain THII_1834 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative THII_1834 IPR002288 DNA gyrase B subunit, C-terminal THII_1834 IPR003594 Histidine kinase/HSP90-like ATPase THII_1834 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal THII_1834 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1834 IPR020568 Ribosomal protein S5 domain 2-type fold THII_1834 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_1834 IPR001241 DNA topoisomerase, type IIA THII_1834 IPR013760 DNA topoisomerase, type IIA-like domain superfamily THII_1834 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 THII_1835 IPR036165 YefM-like superfamily THII_1835 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_1836 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1836 IPR009614 Toxin YoeB THII_1837 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA THII_1837 IPR042118 QueA, domain 1 THII_1837 IPR042119 QueA, domain 2 THII_1837 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily THII_1846 IPR018422 Cation/H+ exchanger, CPA1 family THII_1846 IPR006153 Cation/H+ exchanger THII_1846 IPR038770 Sodium/solute symporter superfamily THII_1847 IPR000160 GGDEF domain THII_1847 IPR011006 CheY-like superfamily THII_1847 IPR001789 Signal transduction response regulator, receiver domain THII_1847 IPR029787 Nucleotide cyclase THII_1848 IPR007453 Sulphur transfer protein DsrC/TusE THII_1848 IPR042072 DsrC-like protein, C-terminal domain THII_1848 IPR025526 DsrC-like domain superfamily THII_1849 IPR037522 HD-GYP domain THII_1849 IPR003607 HD/PDEase domain THII_1849 IPR011006 CheY-like superfamily THII_1849 IPR001789 Signal transduction response regulator, receiver domain THII_1851 IPR007485 LPS-assembly lipoprotein LptE THII_1852 IPR025709 Leucyl-tRNA synthetase, editing domain THII_1852 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain THII_1852 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THII_1852 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1852 IPR015413 Methionyl/Leucyl tRNA synthetase THII_1852 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding THII_1852 IPR002302 Leucine-tRNA ligase THII_1852 IPR002300 Aminoacyl-tRNA synthetase, class Ia THII_1852 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THII_1854 IPR015947 PUA-like superfamily THII_1854 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1854 IPR019614 S-adenosylmethionine-dependent methyltransferase THII_1854 IPR023542 rRNA large subunit methyltransferase I THII_1854 IPR041532 RlmI, PUA-like domain THII_1854 IPR002478 PUA domain THII_1854 IPR036974 PUA domain superfamily THII_1862 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 THII_1862 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain THII_1862 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel THII_1862 IPR018136 Aconitase family, 4Fe-4S cluster binding site THII_1862 IPR036008 Aconitase, iron-sulfur domain THII_1862 IPR004406 Aconitase B THII_1862 IPR015932 Aconitase, domain 2 THII_1862 IPR015929 Aconitase B, swivel THII_1862 IPR036288 Aconitase B, HEAT-like domain superfamily THII_1862 IPR015933 Aconitase B, HEAT-like domain THII_1865 IPR000209 Peptidase S8/S53 domain THII_1865 IPR023827 Peptidase S8, subtilisin, Asp-active site THII_1865 IPR022398 Peptidase S8, subtilisin, His-active site THII_1865 IPR023828 Peptidase S8, subtilisin, Ser-active site THII_1865 IPR015500 Peptidase S8, subtilisin-related THII_1865 IPR034084 Thermitase-like, domain THII_1865 IPR036852 Peptidase S8/S53 domain superfamily THII_1870 IPR011551 NTP pyrophosphohydrolase MazG THII_1870 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core THII_1873 IPR005474 Transketolase, N-terminal THII_1873 IPR029061 Thiamin diphosphate-binding fold THII_1874 IPR033248 Transketolase, C-terminal domain THII_1874 IPR005475 Transketolase-like, pyrimidine-binding domain THII_1874 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THII_1874 IPR029061 Thiamin diphosphate-binding fold THII_1875 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal THII_1875 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily THII_1875 IPR036422 RuBisCO large subunit, N-terminal domain superfamily THII_1875 IPR033966 RuBisCO THII_1876 IPR000924 Glutamyl/glutaminyl-tRNA synthetase THII_1876 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain THII_1876 IPR033910 Glutamyl-tRNA synthetase THII_1876 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding THII_1876 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 THII_1876 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THII_1876 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial THII_1876 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1878 IPR000184 Bacterial surface antigen (D15) THII_1878 IPR010827 POTRA domain, BamA/TamA-like THII_1878 IPR034746 POTRA domain THII_1878 IPR035243 TamA, POTRA domain 1 THII_1878 IPR039910 Surface antigen D15-like THII_1880 IPR013752 Ketopantoate reductase, C-terminal domain THII_1880 IPR036291 NAD(P)-binding domain superfamily THII_1880 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THII_1880 IPR013328 6-phosphogluconate dehydrogenase, domain 2 THII_1880 IPR003710 Ketopantoate reductase ApbA/PanE THII_1880 IPR013332 Ketopantoate reductase, N-terminal domain THII_1881 IPR023473 AMMECR1 THII_1881 IPR036071 AMMECR1 domain superfamily THII_1881 IPR027623 AmmeMemoRadiSam system protein A THII_1881 IPR027485 AMMECR1, N-terminal THII_1881 IPR002733 AMMECR1 domain THII_1881 IPR023472 Uncharacterised protein family MJ0810 THII_1882 IPR002737 MEMO1 family THII_1884 IPR011006 CheY-like superfamily THII_1884 IPR003594 Histidine kinase/HSP90-like ATPase THII_1884 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1884 IPR005467 Histidine kinase domain THII_1884 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1884 IPR036641 HPT domain superfamily THII_1884 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1884 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1884 IPR001789 Signal transduction response regulator, receiver domain THII_1884 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_1884 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1887 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1887 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain THII_1888 IPR029044 Nucleotide-diphospho-sugar transferases THII_1888 IPR013482 Molybdenum cofactor guanylyltransferase THII_1888 IPR025877 MobA-like NTP transferase THII_1889 IPR000192 Aminotransferase class V domain THII_1889 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THII_1889 IPR015424 Pyridoxal phosphate-dependent transferase THII_1889 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_1889 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_1889 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase THII_1893 IPR007627 RNA polymerase sigma-70 region 2 THII_1893 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 THII_1893 IPR013325 RNA polymerase sigma factor, region 2 THII_1893 IPR039425 RNA polymerase sigma-70 like THII_1893 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1893 IPR014284 RNA polymerase sigma-70 like domain THII_1893 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_1895 IPR003834 Cytochrome C biogenesis protein, transmembrane domain THII_1895 IPR041017 DipZ, thioredoxin-like C-terminal domain THII_1895 IPR013766 Thioredoxin domain THII_1895 IPR036249 Thioredoxin-like superfamily THII_1895 IPR008979 Galactose-binding-like domain superfamily THII_1895 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant THII_1896 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain THII_1897 IPR035906 MetI-like superfamily THII_1897 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THII_1898 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1898 IPR005892 Glycine betaine transport ATP-binding subunit THII_1898 IPR000644 CBS domain THII_1898 IPR003439 ABC transporter-like THII_1898 IPR003593 AAA+ ATPase domain THII_1898 IPR017871 ABC transporter, conserved site THII_1899 IPR013216 Methyltransferase type 11 THII_1899 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1900 IPR041698 Methyltransferase domain 25 THII_1900 IPR014369 Glycine/Sarcosine N-methyltransferase THII_1901 IPR041698 Methyltransferase domain 25 THII_1901 IPR014369 Glycine/Sarcosine N-methyltransferase THII_1901 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1904 IPR019614 S-adenosylmethionine-dependent methyltransferase THII_1904 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1904 IPR000241 Putative RNA methylase domain THII_1904 IPR004114 THUMP domain THII_1904 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THII_1904 IPR017244 Ribosomal RNA large subunit methyltransferase K/L THII_1905 IPR038380 Ribosomal protein S21 superfamily THII_1905 IPR001911 Ribosomal protein S21 THII_1905 IPR018278 Ribosomal protein S21, conserved site THII_1907 IPR036977 DNA Primase, CHC2-type zinc finger THII_1907 IPR013173 DNA primase DnaG, DnaB-binding domain THII_1907 IPR006295 DNA primase, DnaG THII_1907 IPR019475 DNA primase, DnaB-helicase binding domain THII_1907 IPR006171 TOPRIM domain THII_1907 IPR013264 DNA primase, catalytic core, N-terminal THII_1907 IPR034151 Bacterial DnaG primase, TOPRIM domain THII_1907 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal THII_1907 IPR030846 DNA primase DnaG, bacteria THII_1907 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily THII_1907 IPR002694 Zinc finger, CHC2-type THII_1908 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1908 IPR014284 RNA polymerase sigma-70 like domain THII_1908 IPR000943 RNA polymerase sigma-70 THII_1908 IPR012760 RNA polymerase sigma factor RpoD, C-terminal THII_1908 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_1908 IPR013325 RNA polymerase sigma factor, region 2 THII_1908 IPR009042 RNA polymerase sigma-70 region 1.2 THII_1908 IPR007627 RNA polymerase sigma-70 region 2 THII_1908 IPR042189 Sigma-70 factor, region 1.1 superfamily THII_1908 IPR007127 RNA polymerase sigma factor 70, region 1.1 THII_1908 IPR007631 RNA polymerase sigma factor 70, non-essential domain THII_1908 IPR028630 RNA polymerase sigma factor RpoD THII_1908 IPR007624 RNA polymerase sigma-70 region 3 THII_1908 IPR007630 RNA polymerase sigma-70 region 4 THII_1909 IPR022663 Dihydrodipicolinate reductase, C-terminal THII_1909 IPR022664 Dihydrodipicolinate reductase, conserved site THII_1909 IPR023940 Dihydrodipicolinate reductase THII_1909 IPR036291 NAD(P)-binding domain superfamily THII_1909 IPR000846 Dihydrodipicolinate reductase, N-terminal THII_1912 IPR001173 Glycosyltransferase 2-like THII_1912 IPR029044 Nucleotide-diphospho-sugar transferases THII_1913 IPR029787 Nucleotide cyclase THII_1913 IPR000014 PAS domain THII_1913 IPR035965 PAS domain superfamily THII_1913 IPR035919 EAL domain superfamily THII_1913 IPR000160 GGDEF domain THII_1913 IPR001633 EAL domain THII_1913 IPR005330 MHYT domain THII_1914 IPR023696 Ureohydrolase domain superfamily THII_1914 IPR037138 Histone deacetylase domain superfamily THII_1914 IPR023801 Histone deacetylase domain THII_1914 IPR000286 Histone deacetylase family THII_1915 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily THII_1915 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily THII_1915 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain THII_1915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1915 IPR006050 DNA photolyase, N-terminal THII_1915 IPR002081 Cryptochrome/DNA photolyase class 1 THII_1915 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal THII_1917 IPR003593 AAA+ ATPase domain THII_1917 IPR022374 Energy-dependent translational throttle protein EttA THII_1917 IPR003439 ABC transporter-like THII_1917 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1917 IPR017871 ABC transporter, conserved site THII_1917 IPR032781 ABC-transporter extension domain THII_1919 IPR002699 ATPase, V1 complex, subunit D THII_1920 IPR023031 Orotate phosphoribosyltransferase THII_1920 IPR004467 Orotate phosphoribosyl transferase domain THII_1920 IPR029057 Phosphoribosyltransferase-like THII_1920 IPR000836 Phosphoribosyltransferase domain THII_1921 IPR003557 Cytochrome c-type biogenesis protein CcmC THII_1921 IPR002541 Cytochrome c assembly protein THII_1923 IPR028166 Bifunctional transglycosylase second domain THII_1923 IPR023346 Lysozyme-like domain superfamily THII_1923 IPR001264 Glycosyl transferase, family 51 THII_1923 IPR001460 Penicillin-binding protein, transpeptidase THII_1923 IPR011813 Penicillin-binding protein 1B THII_1923 IPR012338 Beta-lactamase/transpeptidase-like THII_1923 IPR036950 Penicillin binding protein transglycosylase domain THII_1924 IPR004090 Chemotaxis methyl-accepting receptor THII_1924 IPR003660 HAMP domain THII_1924 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain THII_1924 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_1926 IPR013026 Tetratricopeptide repeat-containing domain THII_1926 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THII_1926 IPR000780 MCP methyltransferase, CheR-type THII_1926 IPR011990 Tetratricopeptide-like helical domain superfamily THII_1926 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1926 IPR019734 Tetratricopeptide repeat THII_1928 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1928 IPR036641 HPT domain superfamily THII_1928 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1928 IPR004105 Histidine kinase CheA-like, homodimeric domain THII_1928 IPR005467 Histidine kinase domain THII_1928 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1928 IPR003594 Histidine kinase/HSP90-like ATPase THII_1928 IPR035891 CheY-binding domain of CheA THII_1928 IPR002545 CheW-like domain THII_1928 IPR036061 CheW-like domain superfamily THII_1928 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding THII_1928 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1928 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily THII_1928 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily THII_1929 IPR035909 Methylesterase CheB, C-terminal THII_1929 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type THII_1929 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase THII_1929 IPR001789 Signal transduction response regulator, receiver domain THII_1929 IPR011006 CheY-like superfamily THII_1930 IPR001789 Signal transduction response regulator, receiver domain THII_1930 IPR029787 Nucleotide cyclase THII_1930 IPR011006 CheY-like superfamily THII_1930 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase THII_1935 IPR029044 Nucleotide-diphospho-sugar transferases THII_1935 IPR001173 Glycosyltransferase 2-like THII_1939 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1939 IPR009057 Homeobox-like domain superfamily THII_1939 IPR007367 Protein of unknown function DUF433 THII_1943 IPR008040 Hydantoinaseoxoprolinase, N-terminal THII_1943 IPR002821 Hydantoinase A/oxoprolinase THII_1945 IPR036515 Transposase IS200-like superfamily THII_1945 IPR002686 Transposase IS200-like THII_1949 IPR011006 CheY-like superfamily THII_1949 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1949 IPR003594 Histidine kinase/HSP90-like ATPase THII_1949 IPR005467 Histidine kinase domain THII_1949 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1949 IPR029151 Periplasmic sensor-like domain superfamily THII_1949 IPR035965 PAS domain superfamily THII_1949 IPR015387 LuxQ, periplasmic THII_1949 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1949 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1949 IPR001789 Signal transduction response regulator, receiver domain THII_1951 IPR035965 PAS domain superfamily THII_1951 IPR015387 LuxQ, periplasmic THII_1951 IPR003594 Histidine kinase/HSP90-like ATPase THII_1951 IPR001789 Signal transduction response regulator, receiver domain THII_1951 IPR011006 CheY-like superfamily THII_1951 IPR005467 Histidine kinase domain THII_1951 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1951 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1951 IPR029151 Periplasmic sensor-like domain superfamily THII_1951 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1951 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1952 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site THII_1952 IPR012327 D12 class N6 adenine-specific DNA methyltransferase THII_1952 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1954 IPR001789 Signal transduction response regulator, receiver domain THII_1954 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1954 IPR029151 Periplasmic sensor-like domain superfamily THII_1954 IPR011006 CheY-like superfamily THII_1954 IPR003594 Histidine kinase/HSP90-like ATPase THII_1954 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1954 IPR005467 Histidine kinase domain THII_1954 IPR035965 PAS domain superfamily THII_1954 IPR015387 LuxQ, periplasmic THII_1954 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1954 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_1956 IPR012292 Globin/Protoglobin THII_1956 IPR029787 Nucleotide cyclase THII_1956 IPR009050 Globin-like superfamily THII_1956 IPR000160 GGDEF domain THII_1956 IPR039435 Diguanylate cyclase DosC, globin sensor domain THII_1957 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1957 IPR025199 DNA translocase FtsK, 4TM region THII_1957 IPR036390 Winged helix DNA-binding domain superfamily THII_1957 IPR018541 FtsK gamma domain THII_1957 IPR002543 FtsK domain THII_1957 IPR041027 FtsK alpha domain THII_1957 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1959 IPR025714 Methyltransferase domain THII_1959 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1959 IPR026669 Arsenite methyltransferase-like THII_1960 IPR007474 ApaG domain THII_1960 IPR036767 ApaG domain superfamily THII_1960 IPR023065 Uncharacterised protein family ApaG THII_1962 IPR005255 PdxA family THII_1962 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase THII_1963 IPR027304 Trigger factor/SurA domain superfamily THII_1963 IPR015391 SurA N-terminal THII_1963 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type THII_1963 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site THII_1963 IPR023034 Peptidyl-prolyl isomerase SurA THII_1969 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1969 IPR025302 Domain of unknown function DUF4162 THII_1969 IPR017871 ABC transporter, conserved site THII_1969 IPR003439 ABC transporter-like THII_1969 IPR003593 AAA+ ATPase domain THII_1970 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1970 IPR013615 CbbQ/NirQ/NorQ, C-terminal THII_1970 IPR011704 ATPase, dynein-related, AAA domain THII_1972 IPR002109 Glutaredoxin THII_1972 IPR011900 Glutaredoxin, GrxC THII_1972 IPR014025 Glutaredoxin subgroup THII_1972 IPR036249 Thioredoxin-like superfamily THII_1972 IPR011767 Glutaredoxin active site THII_1974 IPR036737 OmpA-like domain superfamily THII_1974 IPR006690 Outer membrane protein, OmpA-like, conserved site THII_1974 IPR006665 OmpA-like domain THII_1974 IPR006664 Outer membrane protein, bacterial THII_1977 IPR029062 Class I glutamine amidotransferase-like THII_1977 IPR017926 Glutamine amidotransferase THII_1977 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain THII_1978 IPR037257 General secretory system II, protein E, N-terminal superfamily THII_1978 IPR001482 Type II/IV secretion system protein THII_1978 IPR042181 Type II secretion system, protein E, N-terminal THII_1978 IPR013374 ATPase, type IV, pilus assembly, PilB THII_1978 IPR007831 General secretory system II, protein E, N-terminal THII_1978 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1979 IPR018076 Type II secretion system F domain THII_1979 IPR001992 Type II secretion system conserved site THII_1979 IPR003004 GspF/PilC family THII_1979 IPR042094 Type II secretion system F domain superfamily THII_1980 IPR014032 Peptidase A24A, prepilin type IV, bacterial THII_1980 IPR010627 Peptidase A24A, N-terminal THII_1980 IPR000045 Prepilin type IV endopeptidase, peptidase domain THII_1981 IPR001977 Dephospho-CoA kinase THII_1981 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1982 IPR009777 Cell division protein ZapD THII_1982 IPR036268 ZapD domain superfamily THII_1982 IPR027462 Z ring-associated protein D, C-terminal THII_1983 IPR011006 CheY-like superfamily THII_1983 IPR001789 Signal transduction response regulator, receiver domain THII_1984 IPR001789 Signal transduction response regulator, receiver domain THII_1984 IPR011006 CheY-like superfamily THII_1986 IPR039315 Chemotaxis protein CheW THII_1986 IPR036061 CheW-like domain superfamily THII_1986 IPR002545 CheW-like domain THII_1987 IPR003660 HAMP domain THII_1987 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_1987 IPR029095 NarX-like, N-terminal THII_1987 IPR004090 Chemotaxis methyl-accepting receptor THII_1988 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_1988 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding THII_1988 IPR036641 HPT domain superfamily THII_1988 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_1988 IPR005467 Histidine kinase domain THII_1988 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1988 IPR003594 Histidine kinase/HSP90-like ATPase THII_1988 IPR004105 Histidine kinase CheA-like, homodimeric domain THII_1988 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily THII_1988 IPR035891 CheY-binding domain of CheA THII_1988 IPR002545 CheW-like domain THII_1988 IPR036061 CheW-like domain superfamily THII_1988 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_1988 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily THII_1991 IPR036705 ADP-ribosylation/Crystallin J1 superfamily THII_1991 IPR005502 ADP-ribosylation/Crystallin J1 THII_2000 IPR022907 VapC family THII_2000 IPR002716 PIN domain THII_2000 IPR029060 PIN-like domain superfamily THII_2002 IPR013430 Toxin-antitoxin system, antidote protein, HigA THII_2002 IPR001387 Cro/C1-type helix-turn-helix domain THII_2002 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THII_2023 IPR041627 CbbX, AAA lid domain THII_2023 IPR003593 AAA+ ATPase domain THII_2023 IPR000641 CbxX/CfxQ THII_2023 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2023 IPR003959 ATPase, AAA-type, core THII_2023 IPR023835 Type VII secretion system AAA-ATPase, EccA THII_2023 IPR011990 Tetratricopeptide-like helical domain superfamily THII_2036 IPR002934 Polymerase, nucleotidyl transferase domain THII_2042 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THII_2042 IPR001387 Cro/C1-type helix-turn-helix domain THII_2048 IPR018114 Serine proteases, trypsin family, histidine active site THII_2048 IPR009003 Peptidase S1, PA clan THII_2048 IPR001314 Peptidase S1A, chymotrypsin family THII_2048 IPR001254 Serine proteases, trypsin domain THII_2048 IPR033116 Serine proteases, trypsin family, serine active site THII_2050 IPR041471 UvrB, interaction domain THII_2050 IPR011545 DEAD/DEAH box helicase domain THII_2050 IPR005118 Transcription-repair-coupling factor, C-terminal domain THII_2050 IPR037235 TRCF-like, C-terminal domain THII_2050 IPR036101 CarD-like/TRCF domain superfamily THII_2050 IPR004576 Transcription-repair coupling factor THII_2050 IPR001650 Helicase, C-terminal THII_2050 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_2050 IPR003711 CarD-like/TRCF domain THII_2050 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2051 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2051 IPR007536 Ribosomal RNA small subunit methyltransferase J THII_2053 IPR000160 GGDEF domain THII_2053 IPR029787 Nucleotide cyclase THII_2053 IPR029016 GAF-like domain superfamily THII_2053 IPR016132 Phytochrome chromophore attachment domain THII_2053 IPR003018 GAF domain THII_2053 IPR035919 EAL domain superfamily THII_2053 IPR001294 Phytochrome THII_2053 IPR001633 EAL domain THII_2053 IPR013515 Phytochrome, central region THII_2055 IPR001537 tRNA/rRNA methyltransferase, SpoU type THII_2055 IPR004384 RNA methyltransferase TrmJ/LasT THII_2055 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THII_2055 IPR029028 Alpha/beta knot methyltransferases THII_2056 IPR008258 Transglycosylase SLT domain 1 THII_2056 IPR023346 Lysozyme-like domain superfamily THII_2056 IPR000189 Prokaryotic transglycosylase, active site THII_2057 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2057 IPR038734 Uncharacterized protein YhaN, AAA domain THII_2061 IPR029052 Metallo-dependent phosphatase-like THII_2061 IPR014576 Predicted phosphoesterase, YhaO type THII_2061 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain THII_2061 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type THII_2067 IPR004960 Bacterial lipid A biosynthesis acyltransferase THII_2067 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase THII_2067 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP THII_2069 IPR018076 Type II secretion system F domain THII_2069 IPR003004 GspF/PilC family THII_2069 IPR042094 Type II secretion system F domain superfamily THII_2069 IPR001992 Type II secretion system conserved site THII_2075 IPR010054 General secretion pathway protein G THII_2075 IPR000983 Bacterial general secretion pathway protein G-type pilin THII_2075 IPR013545 Type II secretion system protein G THII_2075 IPR012902 Prokaryotic N-terminal methylation site THII_2077 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THII_2077 IPR017814 Mycothiol biosynthesis protein, MshA THII_2077 IPR001296 Glycosyl transferase, family 1 THII_2078 IPR003855 Potassium transporter THII_2078 IPR023051 Potassium uptake protein, low affinity, Kup THII_2081 IPR011761 ATP-grasp fold THII_2081 IPR006284 Glutathione synthetase, prokaryotic THII_2081 IPR013815 ATP-grasp fold, subdomain 1 THII_2081 IPR004215 Prokaryotic glutathione synthetase, N-terminal THII_2081 IPR016185 Pre-ATP-grasp domain superfamily THII_2081 IPR004218 Prokaryotic glutathione synthetase, ATP-binding THII_2082 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 THII_2082 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain THII_2082 IPR006223 Glycine cleavage system T protein THII_2082 IPR022903 Glycine cleavage system T protein, bacteria THII_2082 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal THII_2082 IPR006222 Aminomethyltransferase, folate-binding domain THII_2082 IPR028896 Aminomethyltransferase-like THII_2083 IPR000089 Biotin/lipoyl attachment THII_2083 IPR002930 Glycine cleavage system H-protein THII_2083 IPR033753 Glycine cleavage system H-protein/Simiate THII_2083 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site THII_2083 IPR011053 Single hybrid motif THII_2083 IPR017453 Glycine cleavage system H-protein, subgroup THII_2084 IPR015424 Pyridoxal phosphate-dependent transferase THII_2084 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 THII_2084 IPR020581 Glycine cleavage system P protein THII_2084 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_2084 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_2085 IPR001789 Signal transduction response regulator, receiver domain THII_2085 IPR011006 CheY-like superfamily THII_2086 IPR021257 Protein of unknown function DUF2809 THII_2090 IPR015947 PUA-like superfamily THII_2090 IPR002478 PUA domain THII_2090 IPR019797 Glutamate 5-kinase, conserved site THII_2090 IPR036974 PUA domain superfamily THII_2090 IPR011529 Glutamate 5-kinase THII_2090 IPR001057 Glutamate/acetylglutamate kinase THII_2090 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase THII_2090 IPR041739 Glutamate-5-kinase domain THII_2090 IPR036393 Acetylglutamate kinase-like superfamily THII_2090 IPR001048 Aspartate/glutamate/uridylate kinase THII_2093 IPR002898 MotA/TolQ/ExbB proton channel THII_2098 IPR036409 Class II aldolase/adducin N-terminal domain superfamily THII_2098 IPR001303 Class II aldolase/adducin N-terminal THII_2098 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase THII_2098 IPR036291 NAD(P)-binding domain superfamily THII_2098 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2100 IPR002477 Peptidoglycan binding-like THII_2100 IPR036365 PGBD-like superfamily THII_2100 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2100 IPR036366 PGBD superfamily THII_2100 IPR003593 AAA+ ATPase domain THII_2102 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site THII_2102 IPR036264 Bacterial exopeptidase dimerisation domain THII_2102 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria THII_2102 IPR002933 Peptidase M20 THII_2102 IPR011650 Peptidase M20, dimerisation domain THII_2103 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type THII_2103 IPR027304 Trigger factor/SurA domain superfamily THII_2103 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site THII_2104 IPR002634 BolA protein THII_2104 IPR036065 BolA-like superfamily THII_2105 IPR005545 YCII-related THII_2105 IPR011008 Dimeric alpha-beta barrel THII_2106 IPR033655 RelA, TGS domain THII_2106 IPR002912 ACT domain THII_2106 IPR012675 Beta-grasp domain superfamily THII_2106 IPR012676 TGS-like THII_2106 IPR004095 TGS THII_2106 IPR007685 RelA/SpoT THII_2106 IPR004811 RelA/SpoT family THII_2106 IPR003607 HD/PDEase domain THII_2107 IPR006008 Intracellular septation protein A THII_2109 IPR003439 ABC transporter-like THII_2109 IPR017871 ABC transporter, conserved site THII_2109 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl THII_2109 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2109 IPR003593 AAA+ ATPase domain THII_2110 IPR003453 ABC transport permease subunit MlaE, Proteobacteria THII_2110 IPR030802 ABC transporter permease MalE THII_2112 IPR003400 Biopolymer transport protein ExbD/TolR THII_2113 IPR036899 Ribosomal protein L13 superfamily THII_2113 IPR005823 Ribosomal protein L13, bacterial-type THII_2113 IPR005822 Ribosomal protein L13 THII_2113 IPR023563 Ribosomal protein L13, conserved site THII_2114 IPR020574 Ribosomal protein S9, conserved site THII_2114 IPR023035 Ribosomal protein S9, bacterial/plastid THII_2114 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_2114 IPR020568 Ribosomal protein S5 domain 2-type fold THII_2114 IPR000754 Ribosomal protein S9 THII_2115 IPR014756 Immunoglobulin E-set THII_2115 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB THII_2115 IPR006047 Glycosyl hydrolase, family 13, catalytic domain THII_2115 IPR013783 Immunoglobulin-like fold THII_2115 IPR017853 Glycoside hydrolase superfamily THII_2115 IPR013780 Glycosyl hydrolase, all-beta THII_2115 IPR037439 1,4-alpha-glucan-branching enzyme THII_2115 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta THII_2115 IPR004193 Glycoside hydrolase, family 13, N-terminal THII_2118 IPR022337 Inositol monophosphatase, SuhB THII_2118 IPR020550 Inositol monophosphatase, conserved site THII_2118 IPR000760 Inositol monophosphatase-like THII_2118 IPR033942 Inositol monophosphatase THII_2118 IPR020583 Inositol monophosphatase, metal-binding site THII_2119 IPR037171 NagB/RpiA transferase-like THII_2119 IPR002698 5-formyltetrahydrofolate cyclo-ligase THII_2119 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily THII_2120 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2120 IPR015943 WD40/YVTN repeat-like-containing domain superfamily THII_2120 IPR038765 Papain-like cysteine peptidase superfamily THII_2120 IPR017986 WD40-repeat-containing domain THII_2120 IPR029030 Caspase-like domain superfamily THII_2120 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain THII_2120 IPR019775 WD40 repeat, conserved site THII_2120 IPR036322 WD40-repeat-containing domain superfamily THII_2120 IPR001680 WD40 repeat THII_2120 IPR020472 G-protein beta WD-40 repeat THII_2123 IPR000873 AMP-dependent synthetase/ligase THII_2123 IPR025110 AMP-binding enzyme, C-terminal domain THII_2123 IPR042099 AMP-dependent synthetase-like superfamily THII_2123 IPR002123 Phospholipid/glycerol acyltransferase THII_2123 IPR020845 AMP-binding, conserved site THII_2123 IPR023775 Bifunctional protein Aas THII_2127 IPR009241 Toxin HigB-like THII_2127 IPR014056 Addiction module killer protein, predicted THII_2128 IPR014057 Uncharacterized protein HI1420 THII_2128 IPR001387 Cro/C1-type helix-turn-helix domain THII_2128 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THII_2132 IPR005338 Anhydro-N-acetylmuramic acid kinase THII_2133 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2133 IPR002938 FAD-binding domain THII_2134 IPR008538 Domain of unknown function DUF820 THII_2134 IPR011335 Restriction endonuclease type II-like THII_2136 IPR023941 Glutathione-regulated potassium-efflux system protein KefC THII_2136 IPR006036 Potassium uptake protein TrkA THII_2136 IPR038770 Sodium/solute symporter superfamily THII_2136 IPR036291 NAD(P)-binding domain superfamily THII_2136 IPR004771 K+/H+ exchanger THII_2136 IPR006153 Cation/H+ exchanger THII_2136 IPR003148 Regulator of K+ conductance, N-terminal THII_2139 IPR016161 Aldehyde/histidinol dehydrogenase THII_2139 IPR016162 Aldehyde dehydrogenase, N-terminal THII_2139 IPR000965 GPR domain THII_2139 IPR012134 Glutamate-5-semialdehyde dehydrogenase THII_2139 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site THII_2139 IPR015590 Aldehyde dehydrogenase domain THII_2139 IPR016163 Aldehyde dehydrogenase, C-terminal THII_2141 IPR015899 UDP-galactopyranose mutase, C-terminal THII_2141 IPR004379 UDP-galactopyranose mutase THII_2144 IPR002123 Phospholipid/glycerol acyltransferase THII_2144 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase THII_2152 IPR004276 Glycosyltransferase family 28, N-terminal domain THII_2152 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase THII_2161 IPR007329 FMN-binding THII_2161 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG THII_2162 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD THII_2162 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D THII_2163 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2163 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2163 IPR009051 Alpha-helical ferredoxin THII_2163 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain THII_2163 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC THII_2163 IPR026902 RnfC Barrel sandwich hybrid domain THII_2163 IPR019554 Soluble ligand binding domain THII_2163 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily THII_2164 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2164 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB THII_2164 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria THII_2164 IPR007202 4Fe-4S domain THII_2164 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2165 IPR003667 NqrDE/RnfAE THII_2165 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA THII_2166 IPR029039 Flavoprotein-like superfamily THII_2166 IPR010089 Flavoprotein WrbA-like THII_2166 IPR005025 NADPH-dependent FMN reductase-like THII_2166 IPR008254 Flavodoxin/nitric oxide synthase THII_2166 IPR001226 Flavodoxin, conserved site THII_2168 IPR001789 Signal transduction response regulator, receiver domain THII_2168 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_2168 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2168 IPR005467 Histidine kinase domain THII_2168 IPR011006 CheY-like superfamily THII_2168 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2168 IPR036641 HPT domain superfamily THII_2168 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2168 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2168 IPR019247 Histidine kinase BarA, N-terminal THII_2168 IPR003594 Histidine kinase/HSP90-like ATPase THII_2168 IPR003660 HAMP domain THII_2169 IPR003594 Histidine kinase/HSP90-like ATPase THII_2169 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2169 IPR001789 Signal transduction response regulator, receiver domain THII_2169 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_2169 IPR036641 HPT domain superfamily THII_2169 IPR019247 Histidine kinase BarA, N-terminal THII_2169 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2169 IPR005467 Histidine kinase domain THII_2169 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2169 IPR003660 HAMP domain THII_2169 IPR011006 CheY-like superfamily THII_2169 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2170 IPR037143 4'-phosphopantetheinyl transferase domain superfamily THII_2170 IPR004568 Phosphopantetheine-protein transferase domain THII_2170 IPR002582 Holo-[acyl carrier protein] synthase THII_2170 IPR008278 4'-phosphopantetheinyl transferase domain THII_2171 IPR038521 ThiC/Bza superfamily THII_2171 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B THII_2171 IPR037509 Phosphomethylpyrimidine synthase THII_2171 IPR025747 ThiC-associated domain THII_2172 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase THII_2172 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2173 IPR010130 Type I secretion outer membrane protein, TolC THII_2173 IPR003423 Outer membrane efflux protein THII_2174 IPR036852 Peptidase S8/S53 domain superfamily THII_2174 IPR000209 Peptidase S8/S53 domain THII_2174 IPR023827 Peptidase S8, subtilisin, Asp-active site THII_2174 IPR002884 P domain THII_2174 IPR022398 Peptidase S8, subtilisin, His-active site THII_2174 IPR023828 Peptidase S8, subtilisin, Ser-active site THII_2174 IPR015500 Peptidase S8, subtilisin-related THII_2174 IPR034176 Peptidase MprA-like catalytic domain THII_2175 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding THII_2175 IPR003660 HAMP domain THII_2175 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site THII_2175 IPR004090 Chemotaxis methyl-accepting receptor THII_2175 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily THII_2175 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_2176 IPR002545 CheW-like domain THII_2176 IPR036061 CheW-like domain superfamily THII_2176 IPR039315 Chemotaxis protein CheW THII_2177 IPR004105 Histidine kinase CheA-like, homodimeric domain THII_2177 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily THII_2177 IPR036641 HPT domain superfamily THII_2177 IPR002545 CheW-like domain THII_2177 IPR003594 Histidine kinase/HSP90-like ATPase THII_2177 IPR005467 Histidine kinase domain THII_2177 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2177 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2177 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_2177 IPR036061 CheW-like domain superfamily THII_2177 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2178 IPR011006 CheY-like superfamily THII_2178 IPR001789 Signal transduction response regulator, receiver domain THII_2179 IPR004622 DNA polymerase III, delta prime subunit THII_2179 IPR015199 DNA polymerase III, delta subunit, C-terminal THII_2179 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2181 IPR015991 Uncharacterised hydrolase TatD-type THII_2181 IPR032466 Metal-dependent hydrolase THII_2181 IPR018228 Deoxyribonuclease, TatD-related, conserved site THII_2181 IPR001130 TatD family THII_2182 IPR011611 Carbohydrate kinase PfkB THII_2182 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site THII_2182 IPR029056 Ribokinase-like THII_2184 IPR011566 Ubiquinone biosynthesis protein Coq7 THII_2184 IPR012347 Ferritin-like THII_2184 IPR009078 Ferritin-like superfamily THII_2185 IPR025708 Heat shock protein 15 THII_2185 IPR036986 RNA-binding S4 domain superfamily THII_2185 IPR002942 RNA-binding S4 domain THII_2188 IPR003660 HAMP domain THII_2188 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain THII_2188 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_2188 IPR004090 Chemotaxis methyl-accepting receptor THII_2194 IPR009081 Phosphopantetheine binding ACP domain THII_2194 IPR036736 ACP-like superfamily THII_2199 IPR005063 Transposase, IS1 THII_2201 IPR036736 ACP-like superfamily THII_2201 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2201 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2201 IPR036291 NAD(P)-binding domain superfamily THII_2201 IPR032821 Ketoacyl-synthetase, C-terminal extension THII_2201 IPR020807 Polyketide synthase, dehydratase domain THII_2201 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2201 IPR018201 Beta-ketoacyl synthase, active site THII_2201 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily THII_2201 IPR042104 Polyketide synthase, dehydratase domain superfamily THII_2201 IPR042099 AMP-dependent synthetase-like superfamily THII_2201 IPR000873 AMP-dependent synthetase/ligase THII_2201 IPR020845 AMP-binding, conserved site THII_2201 IPR025110 AMP-binding enzyme, C-terminal domain THII_2201 IPR010071 Amino acid adenylation domain THII_2201 IPR001242 Condensation domain THII_2201 IPR013968 Polyketide synthase, ketoreductase domain THII_2201 IPR016039 Thiolase-like THII_2201 IPR009081 Phosphopantetheine binding ACP domain THII_2201 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THII_2201 IPR006162 Phosphopantetheine attachment site THII_2202 IPR010071 Amino acid adenylation domain THII_2202 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2202 IPR018201 Beta-ketoacyl synthase, active site THII_2202 IPR001242 Condensation domain THII_2202 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily THII_2202 IPR042099 AMP-dependent synthetase-like superfamily THII_2202 IPR018201 Beta-ketoacyl synthase, active site THII_2202 IPR036736 ACP-like superfamily THII_2202 IPR025110 AMP-binding enzyme, C-terminal domain THII_2202 IPR020845 AMP-binding, conserved site THII_2202 IPR000873 AMP-dependent synthetase/ligase THII_2202 IPR042099 AMP-dependent synthetase-like superfamily THII_2202 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily THII_2202 IPR001242 Condensation domain THII_2202 IPR000873 AMP-dependent synthetase/ligase THII_2202 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2202 IPR036291 NAD(P)-binding domain superfamily THII_2202 IPR036736 ACP-like superfamily THII_2202 IPR025110 AMP-binding enzyme, C-terminal domain THII_2202 IPR036291 NAD(P)-binding domain superfamily THII_2202 IPR010071 Amino acid adenylation domain THII_2202 IPR016039 Thiolase-like THII_2202 IPR006162 Phosphopantetheine attachment site THII_2202 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2202 IPR009081 Phosphopantetheine binding ACP domain THII_2202 IPR013968 Polyketide synthase, ketoreductase domain THII_2202 IPR042104 Polyketide synthase, dehydratase domain superfamily THII_2202 IPR020845 AMP-binding, conserved site THII_2202 IPR020807 Polyketide synthase, dehydratase domain THII_2202 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2202 IPR032821 Ketoacyl-synthetase, C-terminal extension THII_2202 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THII_2202 IPR032821 Ketoacyl-synthetase, C-terminal extension THII_2202 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2202 IPR020807 Polyketide synthase, dehydratase domain THII_2202 IPR042104 Polyketide synthase, dehydratase domain superfamily THII_2202 IPR013968 Polyketide synthase, ketoreductase domain THII_2202 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THII_2202 IPR009081 Phosphopantetheine binding ACP domain THII_2202 IPR006162 Phosphopantetheine attachment site THII_2202 IPR016039 Thiolase-like THII_2202 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2204 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THII_2204 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal THII_2204 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding THII_2204 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site THII_2204 IPR022694 3-hydroxyacyl-CoA dehydrogenase THII_2204 IPR036291 NAD(P)-binding domain superfamily THII_2204 IPR013328 6-phosphogluconate dehydrogenase, domain 2 THII_2206 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal THII_2206 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal THII_2206 IPR006089 Acyl-CoA dehydrogenase, conserved site THII_2206 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain THII_2206 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal THII_2206 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily THII_2206 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily THII_2208 IPR013968 Polyketide synthase, ketoreductase domain THII_2208 IPR042104 Polyketide synthase, dehydratase domain superfamily THII_2208 IPR020807 Polyketide synthase, dehydratase domain THII_2208 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2208 IPR032821 Ketoacyl-synthetase, C-terminal extension THII_2208 IPR036291 NAD(P)-binding domain superfamily THII_2208 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2208 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2208 IPR018201 Beta-ketoacyl synthase, active site THII_2208 IPR036736 ACP-like superfamily THII_2208 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THII_2208 IPR009081 Phosphopantetheine binding ACP domain THII_2208 IPR006162 Phosphopantetheine attachment site THII_2208 IPR011254 Prismane-like superfamily THII_2208 IPR016039 Thiolase-like THII_2209 IPR001242 Condensation domain THII_2209 IPR018201 Beta-ketoacyl synthase, active site THII_2209 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2209 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2209 IPR000873 AMP-dependent synthetase/ligase THII_2209 IPR013968 Polyketide synthase, ketoreductase domain THII_2209 IPR042104 Polyketide synthase, dehydratase domain superfamily THII_2209 IPR025110 AMP-binding enzyme, C-terminal domain THII_2209 IPR020807 Polyketide synthase, dehydratase domain THII_2209 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THII_2209 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2209 IPR032821 Ketoacyl-synthetase, C-terminal extension THII_2209 IPR036291 NAD(P)-binding domain superfamily THII_2209 IPR020845 AMP-binding, conserved site THII_2209 IPR016039 Thiolase-like THII_2209 IPR006162 Phosphopantetheine attachment site THII_2209 IPR009081 Phosphopantetheine binding ACP domain THII_2209 IPR036736 ACP-like superfamily THII_2209 IPR010071 Amino acid adenylation domain THII_2209 IPR042099 AMP-dependent synthetase-like superfamily THII_2209 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily THII_2211 IPR032806 H repeat-associated protein, N-terminal THII_2211 IPR002559 Transposase, IS4-like THII_2215 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_2215 IPR013785 Aldolase-type TIM barrel THII_2215 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type THII_2215 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding THII_2215 IPR014179 PfaD family protein THII_2215 IPR001227 Acyl transferase domain superfamily THII_2215 IPR014043 Acyl transferase THII_2217 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2217 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2217 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2217 IPR016039 Thiolase-like THII_2217 IPR000794 Beta-ketoacyl synthase THII_2218 IPR032806 H repeat-associated protein, N-terminal THII_2218 IPR002559 Transposase, IS4-like THII_2219 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain THII_2219 IPR016039 Thiolase-like THII_2219 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal THII_2220 IPR029045 ClpP/crotonase-like domain superfamily THII_2220 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site THII_2220 IPR001753 Enoyl-CoA hydratase/isomerase THII_2238 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding THII_2238 IPR036637 Phosphohistidine domain superfamily THII_2238 IPR008279 PEP-utilising enzyme, mobile domain THII_2238 IPR013815 ATP-grasp fold, subdomain 1 THII_2244 IPR018303 P-type ATPase, phosphorylation site THII_2244 IPR023298 P-type ATPase, transmembrane domain superfamily THII_2244 IPR006122 Heavy metal-associated domain, copper ion-binding THII_2244 IPR023299 P-type ATPase, cytoplasmic domain N THII_2244 IPR023214 HAD superfamily THII_2244 IPR036412 HAD-like superfamily THII_2244 IPR008250 P-type ATPase, A domain superfamily THII_2244 IPR027256 P-type ATPase, subfamily IB THII_2244 IPR036163 Heavy metal-associated domain superfamily THII_2244 IPR001757 P-type ATPase THII_2244 IPR017969 Heavy-metal-associated, conserved site THII_2244 IPR006121 Heavy metal-associated domain, HMA THII_2249 IPR038717 Tc1-like transposase, DDE domain THII_2258 IPR006073 GTP binding domain THII_2258 IPR031166 EngA-type guanine nucleotide-binding (G) domain THII_2258 IPR016484 GTP-binding protein EngA THII_2258 IPR005225 Small GTP-binding protein domain THII_2258 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2258 IPR015946 K homology domain-like, alpha/beta THII_2258 IPR032859 GTPase Der, C-terminal KH-domain-like THII_2261 IPR001775 GspD/PilQ family THII_2261 IPR038591 NolW-like superfamily THII_2261 IPR004846 Type II/III secretion system THII_2261 IPR005644 NolW-like THII_2261 IPR004845 Type II secretion system GspD, conserved site THII_2261 IPR013356 Type II secretion system GspD THII_2262 IPR003004 GspF/PilC family THII_2262 IPR001992 Type II secretion system conserved site THII_2262 IPR018076 Type II secretion system F domain THII_2262 IPR042094 Type II secretion system F domain superfamily THII_2263 IPR003593 AAA+ ATPase domain THII_2263 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2263 IPR001482 Type II/IV secretion system protein THII_2263 IPR037257 General secretory system II, protein E, N-terminal superfamily THII_2263 IPR042181 Type II secretion system, protein E, N-terminal THII_2263 IPR013369 Type II secretion system GspE THII_2263 IPR007831 General secretory system II, protein E, N-terminal THII_2265 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm THII_2265 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm THII_2265 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THII_2265 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain THII_2265 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily THII_2265 IPR002300 Aminoacyl-tRNA synthetase, class Ia THII_2265 IPR033705 Valyl tRNA synthetase, anticodon-binding domain THII_2265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_2265 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THII_2265 IPR002303 Valine-tRNA ligase THII_2265 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding THII_2275 IPR025286 MOFRL-associated domain THII_2275 IPR007835 MOFRL domain THII_2275 IPR038614 Glycerate kinase, N-terminal domain superfamily THII_2275 IPR037035 Glycerate kinase-like, C-terminal domain superfamily THII_2275 IPR039760 MOFRL domain-containing protein THII_2277 IPR002937 Amine oxidase THII_2277 IPR014105 Carotenoid/retinoid oxidoreductase THII_2277 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2278 IPR014105 Carotenoid/retinoid oxidoreductase THII_2278 IPR002937 Amine oxidase THII_2278 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2278 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site THII_2279 IPR012675 Beta-grasp domain superfamily THII_2279 IPR036010 2Fe-2S ferredoxin-like superfamily THII_2279 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site THII_2279 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2279 IPR009051 Alpha-helical ferredoxin THII_2279 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein THII_2279 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal THII_2280 IPR004017 Cysteine-rich domain THII_2285 IPR002068 Alpha crystallin/Hsp20 domain THII_2285 IPR008978 HSP20-like chaperone THII_2286 IPR036869 Chaperone J-domain superfamily THII_2286 IPR001623 DnaJ domain THII_2286 IPR023859 DNA-binding protein, curved-DNA THII_2286 IPR002939 Chaperone DnaJ, C-terminal THII_2286 IPR008971 HSP40/DnaJ peptide-binding THII_2286 IPR018253 DnaJ domain, conserved site THII_2288 IPR029052 Metallo-dependent phosphatase-like THII_2288 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) THII_2288 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type THII_2289 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase THII_2289 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme THII_2289 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain THII_2291 IPR001544 Aminotransferase class IV THII_2291 IPR036038 Aminotransferase-like, PLP-dependent enzymes THII_2292 IPR019999 Anthranilate synthase component I-like THII_2292 IPR005801 ADC synthase THII_2292 IPR015890 Chorismate-utilising enzyme, C-terminal THII_2294 IPR029151 Periplasmic sensor-like domain superfamily THII_2294 IPR035965 PAS domain superfamily THII_2294 IPR015387 LuxQ, periplasmic THII_2294 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2294 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2294 IPR001789 Signal transduction response regulator, receiver domain THII_2294 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2294 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2294 IPR003594 Histidine kinase/HSP90-like ATPase THII_2294 IPR011006 CheY-like superfamily THII_2294 IPR005467 Histidine kinase domain THII_2295 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase THII_2295 IPR035909 Methylesterase CheB, C-terminal THII_2296 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal THII_2296 IPR000780 MCP methyltransferase, CheR-type THII_2296 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THII_2296 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2299 IPR029044 Nucleotide-diphospho-sugar transferases THII_2299 IPR001173 Glycosyltransferase 2-like THII_2300 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA THII_2300 IPR001296 Glycosyl transferase, family 1 THII_2300 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THII_2301 IPR029044 Nucleotide-diphospho-sugar transferases THII_2301 IPR001173 Glycosyltransferase 2-like THII_2303 IPR006426 Asparagine synthase, glutamine-hydrolyzing THII_2303 IPR029055 Nucleophile aminohydrolases, N-terminal THII_2303 IPR017932 Glutamine amidotransferase type 2 domain THII_2303 IPR033738 Asparagine synthase, N-terminal domain THII_2303 IPR001962 Asparagine synthase THII_2305 IPR023192 TGS-like domain superfamily THII_2305 IPR012676 TGS-like THII_2305 IPR004095 TGS THII_2305 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2305 IPR006073 GTP binding domain THII_2305 IPR012675 Beta-grasp domain superfamily THII_2305 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 THII_2305 IPR031167 OBG-type guanine nucleotide-binding (G) domain THII_2305 IPR013029 YchF, C-terminal domain THII_2305 IPR041706 YchF, N-terminal THII_2306 IPR001328 Peptidyl-tRNA hydrolase THII_2306 IPR018171 Peptidyl-tRNA hydrolase, conserved site THII_2306 IPR036416 Peptidyl-tRNA hydrolase superfamily THII_2307 IPR020055 Ribosomal protein L25, short-form THII_2307 IPR001021 Ribosomal protein L25, long-form THII_2307 IPR037121 Ribosomal protein L25, C-terminal THII_2307 IPR020057 Ribosomal protein L25, beta domain THII_2307 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal THII_2307 IPR029751 Ribosomal protein L25 THII_2307 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily THII_2308 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type THII_2308 IPR005946 Ribose-phosphate pyrophosphokinase THII_2308 IPR029057 Phosphoribosyltransferase-like THII_2308 IPR000836 Phosphoribosyltransferase domain THII_2308 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain THII_2308 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site THII_2309 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_2309 IPR020568 Ribosomal protein S5 domain 2-type fold THII_2309 IPR006204 GHMP kinase N-terminal domain THII_2309 IPR036554 GHMP kinase, C-terminal domain superfamily THII_2309 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase THII_2309 IPR013750 GHMP kinase, C-terminal domain THII_2310 IPR004565 Outer membrane lipoprotein LolB THII_2310 IPR029046 Lipoprotein localisation LolA/LolB/LppX THII_2311 IPR019734 Tetratricopeptide repeat THII_2311 IPR011990 Tetratricopeptide-like helical domain superfamily THII_2311 IPR013026 Tetratricopeptide repeat-containing domain THII_2312 IPR036249 Thioredoxin-like superfamily THII_2312 IPR024706 Peroxiredoxin, AhpC-type THII_2312 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant THII_2312 IPR013766 Thioredoxin domain THII_2313 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2313 IPR002716 PIN domain THII_2313 IPR029060 PIN-like domain superfamily THII_2313 IPR003714 PhoH-like protein THII_2314 IPR013785 Aldolase-type TIM barrel THII_2314 IPR005990 Inosine-5'-monophosphate dehydrogenase THII_2314 IPR000644 CBS domain THII_2314 IPR015875 IMP dehydrogenase / GMP reductase, conserved site THII_2314 IPR001093 IMP dehydrogenase/GMP reductase THII_2315 IPR002035 von Willebrand factor, type A THII_2315 IPR036465 von Willebrand factor A-like domain superfamily THII_2316 IPR006638 Elp3/MiaB/NifB THII_2316 IPR023404 Radical SAM, alpha/beta horseshoe THII_2316 IPR007197 Radical SAM THII_2316 IPR034497 Bacteriochlorophyll C12 methyltransferase THII_2316 IPR034466 Methyltransferase, class B THII_2323 IPR002941 DNA methylase N-4/N-6 THII_2323 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2323 IPR001091 Restriction/modification DNA-methylase THII_2323 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THII_2325 IPR011006 CheY-like superfamily THII_2325 IPR001789 Signal transduction response regulator, receiver domain THII_2325 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2325 IPR005467 Histidine kinase domain THII_2325 IPR003594 Histidine kinase/HSP90-like ATPase THII_2325 IPR029151 Periplasmic sensor-like domain superfamily THII_2325 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2325 IPR015387 LuxQ, periplasmic THII_2325 IPR035965 PAS domain superfamily THII_2325 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2325 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2326 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase THII_2326 IPR000462 CDP-alcohol phosphatidyltransferase THII_2327 IPR013023 Ketol-acid reductoisomerase THII_2327 IPR000506 Ketol-acid reductoisomerase, C-terminal THII_2327 IPR013116 Ketol-acid reductoisomerase, N-terminal THII_2327 IPR014359 Ketol-acid reductoisomerase, prokaryotic THII_2327 IPR036291 NAD(P)-binding domain superfamily THII_2327 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THII_2331 IPR039557 AHAS, ACT domain THII_2331 IPR019455 Acetolactate synthase, small subunit, C-terminal THII_2331 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal THII_2331 IPR002912 ACT domain THII_2331 IPR004789 Acetolactate synthase, small subunit THII_2332 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding THII_2332 IPR000399 TPP-binding enzyme, conserved site THII_2332 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain THII_2332 IPR012846 Acetolactate synthase, large subunit, biosynthetic THII_2332 IPR029061 Thiamin diphosphate-binding fold THII_2332 IPR029035 DHS-like NAD/FAD-binding domain superfamily THII_2332 IPR012000 Thiamine pyrophosphate enzyme, central domain THII_2332 IPR039368 Acetolactate synthase large subunit, TPP binding domain THII_2333 IPR013783 Immunoglobulin-like fold THII_2333 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG THII_2333 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2333 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2333 IPR032879 FixG, C-terminal immunoglobulin-like domain THII_2338 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal THII_2338 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain THII_2338 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase THII_2338 IPR006405 Nicotinate phosphoribosyltransferase pncB-type THII_2338 IPR013785 Aldolase-type TIM barrel THII_2338 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain THII_2338 IPR007229 Nicotinate phosphoribosyltransferase family THII_2339 IPR036873 Rhodanese-like domain superfamily THII_2339 IPR001763 Rhodanese-like domain THII_2340 IPR018527 Rubredoxin, iron-binding site THII_2340 IPR024935 Rubredoxin domain THII_2340 IPR024922 Rubredoxin THII_2340 IPR024934 Rubredoxin-like domain THII_2341 IPR036409 Class II aldolase/adducin N-terminal domain superfamily THII_2341 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase THII_2341 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase THII_2341 IPR029056 Ribokinase-like THII_2341 IPR019293 Thiamine-phosphate synthase ThiN THII_2342 IPR034291 Thiamine phosphate synthase THII_2342 IPR013785 Aldolase-type TIM barrel THII_2342 IPR036206 Thiamin phosphate synthase superfamily THII_2342 IPR022998 Thiamine phosphate synthase/TenI THII_2343 IPR002830 UbiD decarboxylyase family THII_2343 IPR023677 UbiD decarboxylyase, bacteria THII_2345 IPR025944 Sigma-54 interaction domain, conserved site THII_2345 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_2345 IPR002078 RNA polymerase sigma factor 54 interaction domain THII_2345 IPR001789 Signal transduction response regulator, receiver domain THII_2345 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2345 IPR002197 DNA binding HTH domain, Fis-type THII_2345 IPR009057 Homeobox-like domain superfamily THII_2345 IPR011006 CheY-like superfamily THII_2345 IPR003593 AAA+ ATPase domain THII_2345 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_2348 IPR015875 IMP dehydrogenase / GMP reductase, conserved site THII_2348 IPR013785 Aldolase-type TIM barrel THII_2348 IPR000644 CBS domain THII_2348 IPR005990 Inosine-5'-monophosphate dehydrogenase THII_2348 IPR001093 IMP dehydrogenase/GMP reductase THII_2349 IPR001602 Uncharacterised protein family UPF0047 THII_2349 IPR035917 YjbQ-like superfamily THII_2352 IPR004393 Nicotinate-nucleotide pyrophosphorylase THII_2352 IPR013785 Aldolase-type TIM barrel THII_2352 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD THII_2352 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal THII_2352 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal THII_2352 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily THII_2352 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal THII_2353 IPR011006 CheY-like superfamily THII_2353 IPR001789 Signal transduction response regulator, receiver domain THII_2353 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase THII_2353 IPR029787 Nucleotide cyclase THII_2355 IPR027470 Cation efflux protein, cytoplasmic domain THII_2355 IPR036837 Cation efflux protein, cytoplasmic domain superfamily THII_2355 IPR027469 Cation efflux transmembrane domain superfamily THII_2355 IPR002524 Cation efflux protein THII_2358 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant THII_2358 IPR013766 Thioredoxin domain THII_2358 IPR036249 Thioredoxin-like superfamily THII_2359 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC THII_2359 IPR030393 EngB-type guanine nucleotide-binding (G) domain THII_2359 IPR006073 GTP binding domain THII_2359 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2360 IPR003593 AAA+ ATPase domain THII_2360 IPR003959 ATPase, AAA-type, core THII_2360 IPR019489 Clp ATPase, C-terminal THII_2360 IPR036628 Clp, N-terminal domain superfamily THII_2360 IPR004176 Clp, N-terminal THII_2360 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA THII_2360 IPR001270 ClpA/B family THII_2360 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2360 IPR018368 ClpA/B, conserved site 1 THII_2360 IPR041546 ClpA/ClpB, AAA lid domain THII_2360 IPR028299 ClpA/B, conserved site 2 THII_2361 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like THII_2361 IPR022935 ATP-dependent Clp protease adaptor protein ClpS THII_2361 IPR003769 Adaptor protein ClpS, core THII_2365 IPR013325 RNA polymerase sigma factor, region 2 THII_2365 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria THII_2365 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_2365 IPR007630 RNA polymerase sigma-70 region 4 THII_2365 IPR009042 RNA polymerase sigma-70 region 1.2 THII_2365 IPR007627 RNA polymerase sigma-70 region 2 THII_2365 IPR000943 RNA polymerase sigma-70 THII_2365 IPR014284 RNA polymerase sigma-70 like domain THII_2366 IPR011009 Protein kinase-like domain superfamily THII_2366 IPR002575 Aminoglycoside phosphotransferase THII_2367 IPR005835 Nucleotidyl transferase domain THII_2367 IPR029044 Nucleotide-diphospho-sugar transferases THII_2368 IPR005813 Ribosomal protein L20 THII_2368 IPR035566 Ribosomal protein L20, C-terminal THII_2369 IPR018265 Ribosomal protein L35, conserved site THII_2369 IPR021137 Ribosomal protein L35 THII_2369 IPR037229 Ribosomal protein L35 superfamily THII_2369 IPR001706 Ribosomal protein L35, non-mitochondrial THII_2370 IPR001288 Translation initiation factor 3 THII_2370 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily THII_2370 IPR019815 Translation initiation factor 3, C-terminal THII_2370 IPR019814 Translation initiation factor 3, N-terminal THII_2370 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily THII_2371 IPR006195 Aminoacyl-tRNA synthetase, class II THII_2371 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) THII_2371 IPR004095 TGS THII_2371 IPR036621 Anticodon-binding domain superfamily THII_2371 IPR012947 Threonyl/alanyl tRNA synthetase, SAD THII_2371 IPR033728 Threonine-tRNA ligase catalytic core domain THII_2371 IPR004154 Anticodon-binding THII_2371 IPR002320 Threonine-tRNA ligase, class IIa THII_2371 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily THII_2371 IPR012676 TGS-like THII_2371 IPR012675 Beta-grasp domain superfamily THII_2373 IPR001305 Heat shock protein DnaJ, cysteine-rich domain THII_2373 IPR036869 Chaperone J-domain superfamily THII_2373 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily THII_2373 IPR012724 Chaperone DnaJ THII_2373 IPR001623 DnaJ domain THII_2373 IPR018253 DnaJ domain, conserved site THII_2373 IPR008971 HSP40/DnaJ peptide-binding THII_2373 IPR002939 Chaperone DnaJ, C-terminal THII_2375 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2375 IPR011006 CheY-like superfamily THII_2375 IPR003660 HAMP domain THII_2375 IPR003594 Histidine kinase/HSP90-like ATPase THII_2375 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2375 IPR005467 Histidine kinase domain THII_2375 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2375 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2375 IPR036641 HPT domain superfamily THII_2375 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_2375 IPR019247 Histidine kinase BarA, N-terminal THII_2375 IPR001789 Signal transduction response regulator, receiver domain THII_2378 IPR000595 Cyclic nucleotide-binding domain THII_2378 IPR036390 Winged helix DNA-binding domain superfamily THII_2378 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2378 IPR014710 RmlC-like jelly roll fold THII_2378 IPR012318 Crp-type HTH domain THII_2378 IPR018490 Cyclic nucleotide-binding-like THII_2378 IPR018488 Cyclic nucleotide-binding, conserved site THII_2381 IPR000286 Histone deacetylase family THII_2381 IPR023801 Histone deacetylase domain THII_2381 IPR037138 Histone deacetylase domain superfamily THII_2381 IPR023696 Ureohydrolase domain superfamily THII_2382 IPR008538 Domain of unknown function DUF820 THII_2382 IPR011335 Restriction endonuclease type II-like THII_2389 IPR039657 Dimethylallyltransferase THII_2389 IPR018022 IPP transferase THII_2389 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2390 IPR005001 RNA-binding protein Hfq THII_2390 IPR010920 LSM domain superfamily THII_2391 IPR006073 GTP binding domain THII_2391 IPR032305 GTP-binding protein, middle domain THII_2391 IPR030394 HflX-type guanine nucleotide-binding (G) domain THII_2391 IPR025121 GTPase HflX, N-terminal THII_2391 IPR042108 GTPase HflX, N-terminal domain superfamily THII_2391 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2391 IPR016496 GTPase HflX THII_2391 IPR035647 EF-G domain III/V-like THII_2392 IPR001972 Stomatin family THII_2392 IPR020980 Menbrane protein HflK, N-terminal THII_2392 IPR010201 HflK THII_2392 IPR036013 Band 7/SPFH domain superfamily THII_2392 IPR001107 Band 7 domain THII_2393 IPR001107 Band 7 domain THII_2393 IPR036013 Band 7/SPFH domain superfamily THII_2393 IPR010200 HflC THII_2394 IPR019201 Protein of unknown function DUF2065 THII_2395 IPR004517 ATP phosphoribosyltransferase regulatory subunit THII_2395 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit THII_2395 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain THII_2396 IPR042110 Adenylosuccinate synthetase, domain 2 THII_2396 IPR042109 Adenylosuccinate synthetase, domain 1 THII_2396 IPR001114 Adenylosuccinate synthetase THII_2396 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2396 IPR033128 Adenylosuccinate synthase, active site THII_2396 IPR018220 Adenylosuccinate synthase, GTP-binding site THII_2396 IPR042111 Adenylosuccinate synthetase, domain 3 THII_2397 IPR003829 Pirin, N-terminal domain THII_2397 IPR011051 RmlC-like cupin domain superfamily THII_2397 IPR014710 RmlC-like jelly roll fold THII_2397 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain THII_2397 IPR012093 Pirin THII_2403 IPR000209 Peptidase S8/S53 domain THII_2403 IPR022398 Peptidase S8, subtilisin, His-active site THII_2403 IPR023828 Peptidase S8, subtilisin, Ser-active site THII_2403 IPR023827 Peptidase S8, subtilisin, Asp-active site THII_2403 IPR036852 Peptidase S8/S53 domain superfamily THII_2403 IPR034084 Thermitase-like, domain THII_2403 IPR015500 Peptidase S8, subtilisin-related THII_2406 IPR011006 CheY-like superfamily THII_2406 IPR001867 OmpR/PhoB-type DNA-binding domain THII_2406 IPR001789 Signal transduction response regulator, receiver domain THII_2406 IPR039420 Transcriptional regulatory protein WalR-like THII_2406 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2406 IPR016032 Signal transduction response regulator, C-terminal effector THII_2407 IPR003660 HAMP domain THII_2407 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2407 IPR005467 Histidine kinase domain THII_2407 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2407 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2407 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2407 IPR003594 Histidine kinase/HSP90-like ATPase THII_2413 IPR003667 NqrDE/RnfAE THII_2413 IPR010968 Ion-translocating oxidoreductase complex subunit E THII_2415 IPR011257 DNA glycosylase THII_2415 IPR004036 Endonuclease III-like, conserved site-2 THII_2415 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif THII_2415 IPR004035 Endonuclease III, iron-sulphur binding site THII_2415 IPR003265 HhH-GPD domain THII_2415 IPR000445 Helix-hairpin-helix motif THII_2415 IPR005759 Endonuclease III THII_2415 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal THII_2416 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2416 IPR003682 rRNA small subunit methyltransferase G THII_2420 IPR009614 Toxin YoeB THII_2420 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2424 IPR011704 ATPase, dynein-related, AAA domain THII_2424 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2424 IPR013615 CbbQ/NirQ/NorQ, C-terminal THII_2425 IPR037237 IlvD/EDD, N-terminal domain THII_2425 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site THII_2425 IPR042096 Dihydroxy-acid dehydratase, C-terminal THII_2425 IPR004404 Dihydroxy-acid dehydratase THII_2425 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase THII_2428 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2428 IPR041614 DprA, winged helix domain THII_2428 IPR003488 DNA recombination-mediator protein A THII_2429 IPR007456 Smg THII_2430 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 THII_2430 IPR003601 DNA topoisomerase, type IA, domain 2 THII_2430 IPR023406 DNA topoisomerase, type IA, active site THII_2430 IPR013497 DNA topoisomerase, type IA, central THII_2430 IPR000380 DNA topoisomerase, type IA THII_2430 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 THII_2430 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 THII_2430 IPR003602 DNA topoisomerase, type IA, DNA-binding domain THII_2430 IPR028612 DNA topoisomerase I, type IA THII_2430 IPR005733 DNA topoisomerase I, bacterial-type THII_2430 IPR025589 Topoisomerase C-terminal repeat THII_2430 IPR023405 DNA topoisomerase, type IA, core domain THII_2430 IPR006171 TOPRIM domain THII_2430 IPR034149 DNA topoisomerase 1, TOPRIM domain THII_2431 IPR023535 Threonylcarbamoyl-AMP synthase THII_2431 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THII_2431 IPR006070 YrdC-like domain THII_2432 IPR002187 Nitrogen regulatory protein PII THII_2432 IPR011322 Nitrogen regulatory PII-like, alpha/beta THII_2432 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THII_2432 IPR017918 Nitrogen regulatory protein PII, conserved site THII_2432 IPR002332 Nitrogen regulatory protein P-II, urydylation site THII_2433 IPR029020 Ammonium/urea transporter THII_2433 IPR024041 Ammonium transporter AmtB-like domain THII_2433 IPR001905 Ammonium transporter THII_2433 IPR018047 Ammonium transporter, conserved site THII_2435 IPR006664 Outer membrane protein, bacterial THII_2435 IPR006665 OmpA-like domain THII_2435 IPR036737 OmpA-like domain superfamily THII_2435 IPR006690 Outer membrane protein, OmpA-like, conserved site THII_2439 IPR018253 DnaJ domain, conserved site THII_2439 IPR001305 Heat shock protein DnaJ, cysteine-rich domain THII_2439 IPR008971 HSP40/DnaJ peptide-binding THII_2439 IPR001623 DnaJ domain THII_2439 IPR002939 Chaperone DnaJ, C-terminal THII_2439 IPR012724 Chaperone DnaJ THII_2439 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily THII_2439 IPR036869 Chaperone J-domain superfamily THII_2440 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2440 IPR001789 Signal transduction response regulator, receiver domain THII_2440 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_2440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2440 IPR036641 HPT domain superfamily THII_2440 IPR019247 Histidine kinase BarA, N-terminal THII_2440 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2440 IPR005467 Histidine kinase domain THII_2440 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2440 IPR011006 CheY-like superfamily THII_2440 IPR003594 Histidine kinase/HSP90-like ATPase THII_2440 IPR003660 HAMP domain THII_2442 IPR011006 CheY-like superfamily THII_2442 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase THII_2442 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type THII_2442 IPR001789 Signal transduction response regulator, receiver domain THII_2442 IPR035909 Methylesterase CheB, C-terminal THII_2443 IPR005659 Chemoreceptor glutamine deamidase CheD THII_2443 IPR011324 Cytotoxic necrotizing factor-like, catalytic THII_2443 IPR038592 CheD-like superfamily THII_2444 IPR000780 MCP methyltransferase, CheR-type THII_2444 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THII_2444 IPR026024 Chemotaxis protein methyltransferase CheR THII_2444 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily THII_2444 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2444 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal THII_2446 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily THII_2446 IPR004090 Chemotaxis methyl-accepting receptor THII_2446 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site THII_2446 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_2446 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding THII_2446 IPR003660 HAMP domain THII_2447 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site THII_2447 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding THII_2447 IPR004090 Chemotaxis methyl-accepting receptor THII_2447 IPR003660 HAMP domain THII_2447 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily THII_2447 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_2449 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily THII_2449 IPR037171 NagB/RpiA transferase-like THII_2449 IPR003741 LUD domain THII_2450 IPR009051 Alpha-helical ferredoxin THII_2450 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily THII_2450 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2450 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2450 IPR024569 4Fe-4S binding protein, C-terminal THII_2450 IPR004452 4Fe-4S binding protein THII_2450 IPR037171 NagB/RpiA transferase-like THII_2450 IPR022825 Lactate utilization protein B THII_2450 IPR003741 LUD domain THII_2458 IPR012902 Prokaryotic N-terminal methylation site THII_2458 IPR001082 Fimbrial protein pilin THII_2459 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_2459 IPR027394 Cytochrome-c3 hydrogenase, C-terminal THII_2459 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THII_2459 IPR006311 Twin-arginine translocation pathway, signal sequence THII_2459 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily THII_2459 IPR001821 [NiFe]-hydrogenase, small subunit THII_2459 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily THII_2462 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_2462 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THII_2462 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily THII_2462 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily THII_2462 IPR006311 Twin-arginine translocation pathway, signal sequence THII_2462 IPR001821 [NiFe]-hydrogenase, small subunit THII_2462 IPR027394 Cytochrome-c3 hydrogenase, C-terminal THII_2463 IPR003431 Beta propeller phytase THII_2463 IPR011042 Six-bladed beta-propeller, TolB-like THII_2464 IPR003453 ABC transport permease subunit MlaE, Proteobacteria THII_2464 IPR030802 ABC transporter permease MalE THII_2465 IPR036908 RlpA-like domain superfamily THII_2465 IPR036779 LysM domain superfamily THII_2465 IPR010611 3D domain THII_2465 IPR018392 LysM domain THII_2475 IPR003362 Bacterial sugar transferase THII_2476 IPR003362 Bacterial sugar transferase THII_2478 IPR005496 Integral membrane protein TerC THII_2480 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site THII_2480 IPR004450 Threonine synthase-like THII_2480 IPR026260 Threonine synthase, bacterial/archaeal THII_2480 IPR001926 Pyridoxal-phosphate dependent enzyme THII_2480 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THII_2481 IPR010052 Type II secretion system protein I THII_2481 IPR003413 Type II secretion system protein I domain THII_2481 IPR012902 Prokaryotic N-terminal methylation site THII_2485 IPR005063 Transposase, IS1 THII_2488 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2488 IPR036291 NAD(P)-binding domain superfamily THII_2488 IPR020904 Short-chain dehydrogenase/reductase, conserved site THII_2489 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily THII_2489 IPR005288 L-aspartate oxidase THII_2489 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal THII_2489 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily THII_2489 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2489 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain THII_2491 IPR011782 Peptidase S1C, Do THII_2491 IPR009003 Peptidase S1, PA clan THII_2491 IPR036034 PDZ superfamily THII_2491 IPR001940 Peptidase S1C THII_2491 IPR001478 PDZ domain THII_2493 IPR031157 Tr-type G domain, conserved site THII_2493 IPR038363 LepA, C-terminal domain superfamily THII_2493 IPR013842 GTP-binding protein LepA, C-terminal THII_2493 IPR035647 EF-G domain III/V-like THII_2493 IPR006297 Elongation factor 4 THII_2493 IPR000640 Elongation factor EFG, domain V-like THII_2493 IPR000795 Transcription factor, GTP-binding domain THII_2493 IPR005225 Small GTP-binding protein domain THII_2493 IPR035654 Elongation factor 4, domain IV THII_2493 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2494 IPR019533 Peptidase S26 THII_2494 IPR019756 Peptidase S26A, signal peptidase I, serine active site THII_2494 IPR019757 Peptidase S26A, signal peptidase I, lysine active site THII_2494 IPR019758 Peptidase S26A, signal peptidase I, conserved site THII_2494 IPR000223 Peptidase S26A, signal peptidase I THII_2494 IPR036286 LexA/Signal peptidase-like superfamily THII_2496 IPR011907 Ribonuclease III THII_2496 IPR000999 Ribonuclease III domain THII_2496 IPR036389 Ribonuclease III, endonuclease domain superfamily THII_2496 IPR014720 Double-stranded RNA-binding domain THII_2497 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2497 IPR015946 K homology domain-like, alpha/beta THII_2497 IPR030388 Era-type guanine nucleotide-binding (G) domain THII_2497 IPR005225 Small GTP-binding protein domain THII_2497 IPR004044 K Homology domain, type 2 THII_2497 IPR006073 GTP binding domain THII_2497 IPR005662 GTP-binding protein Era THII_2497 IPR009019 K homology domain superfamily, prokaryotic type THII_2503 IPR000073 Alpha/beta hydrolase fold-1 THII_2503 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase THII_2503 IPR029058 Alpha/Beta hydrolase fold THII_2507 IPR001509 NAD-dependent epimerase/dehydratase THII_2507 IPR036291 NAD(P)-binding domain superfamily THII_2508 IPR004017 Cysteine-rich domain THII_2514 IPR003395 RecF/RecN/SMC, N-terminal THII_2514 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2514 IPR042174 DNA-binding RecF, domain 2 THII_2514 IPR018078 DNA-binding, RecF, conserved site THII_2514 IPR001238 DNA-binding, RecF THII_2520 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2520 IPR042181 Type II secretion system, protein E, N-terminal THII_2520 IPR001482 Type II/IV secretion system protein THII_2520 IPR037257 General secretory system II, protein E, N-terminal superfamily THII_2520 IPR013369 Type II secretion system GspE THII_2522 IPR037021 RnfH superfamily THII_2522 IPR005346 RnfH protein THII_2522 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THII_2523 IPR003667 NqrDE/RnfAE THII_2523 IPR010968 Ion-translocating oxidoreductase complex subunit E THII_2527 IPR005744 Hly-III THII_2527 IPR004254 AdipoR/Haemolysin-III-related THII_2528 IPR011006 CheY-like superfamily THII_2528 IPR003594 Histidine kinase/HSP90-like ATPase THII_2528 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2528 IPR029151 Periplasmic sensor-like domain superfamily THII_2528 IPR005467 Histidine kinase domain THII_2528 IPR001789 Signal transduction response regulator, receiver domain THII_2528 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2528 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2528 IPR015387 LuxQ, periplasmic THII_2528 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2529 IPR041628 ChlI/MoxR, AAA lid domain THII_2529 IPR011703 ATPase, AAA-3 THII_2529 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2531 IPR036565 Mur-like, catalytic domain superfamily THII_2531 IPR004101 Mur ligase, C-terminal THII_2531 IPR036615 Mur ligase, C-terminal domain superfamily THII_2531 IPR013221 Mur ligase, central THII_2531 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase THII_2532 IPR006009 N-acetylglucosaminyltransferase, MurG THII_2532 IPR007235 Glycosyl transferase, family 28, C-terminal THII_2532 IPR006311 Twin-arginine translocation pathway, signal sequence THII_2532 IPR004276 Glycosyltransferase family 28, N-terminal domain THII_2533 IPR005758 UDP-N-acetylmuramate--L-alanine ligase THII_2533 IPR036565 Mur-like, catalytic domain superfamily THII_2533 IPR013221 Mur ligase, central THII_2533 IPR004101 Mur ligase, C-terminal THII_2533 IPR036615 Mur ligase, C-terminal domain superfamily THII_2533 IPR000713 Mur ligase, N-terminal catalytic domain THII_2534 IPR006094 FAD linked oxidase, N-terminal THII_2534 IPR016167 FAD-binding, type PCMH, subdomain 1 THII_2534 IPR016166 FAD-binding domain, PCMH-type THII_2534 IPR036318 FAD-binding, type PCMH-like superfamily THII_2534 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_2534 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase THII_2534 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal THII_2534 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily THII_2535 IPR013815 ATP-grasp fold, subdomain 1 THII_2535 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site THII_2535 IPR005905 D-alanine--D-alanine ligase THII_2535 IPR011095 D-alanine--D-alanine ligase, C-terminal THII_2535 IPR011127 D-alanine--D-alanine ligase, N-terminal domain THII_2535 IPR016185 Pre-ATP-grasp domain superfamily THII_2535 IPR011761 ATP-grasp fold THII_2536 IPR034746 POTRA domain THII_2536 IPR005548 Cell division protein FtsQ/DivIB THII_2536 IPR026579 Cell division protein FtsQ THII_2536 IPR013685 POTRA domain, FtsQ-type THII_2537 IPR020823 Cell division protein FtsA THII_2537 IPR003494 SHS2 domain inserted in FtsA THII_2538 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain THII_2538 IPR008280 Tubulin/FtsZ, C-terminal THII_2538 IPR024757 Cell division protein FtsZ, C-terminal THII_2538 IPR036525 Tubulin/FtsZ, GTPase domain superfamily THII_2538 IPR020805 Cell division protein FtsZ, conserved site THII_2538 IPR003008 Tubulin/FtsZ, GTPase domain THII_2538 IPR000158 Cell division protein FtsZ THII_2539 IPR020568 Ribosomal protein S5 domain 2-type fold THII_2539 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal THII_2539 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal THII_2539 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase THII_2541 IPR011055 Duplicated hybrid motif THII_2541 IPR016047 Peptidase M23 THII_2541 IPR018392 LysM domain THII_2545 IPR042122 Serine acetyltransferase, N-terminal domain superfamily THII_2545 IPR011004 Trimeric LpxA-like superfamily THII_2545 IPR005881 Serine O-acetyltransferase THII_2545 IPR001451 Hexapeptide repeat THII_2545 IPR018357 Hexapeptide transferase, conserved site THII_2546 IPR036737 OmpA-like domain superfamily THII_2546 IPR006664 Outer membrane protein, bacterial THII_2546 IPR006665 OmpA-like domain THII_2546 IPR006690 Outer membrane protein, OmpA-like, conserved site THII_2546 IPR008722 Outer membrane porin F, N-terminal THII_2546 IPR028974 TSP type-3 repeat THII_2546 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel THII_2548 IPR010583 MltA-interacting MipA THII_2551 IPR003744 Queuosine precursor transporter THII_2552 IPR003824 Undecaprenyl-diphosphatase UppP THII_2554 IPR011059 Metal-dependent hydrolase, composite domain superfamily THII_2554 IPR013108 Amidohydrolase 3 THII_2554 IPR032466 Metal-dependent hydrolase THII_2554 IPR012027 Formylmethanofuran dehydrogenase, subunit A THII_2555 IPR000014 PAS domain THII_2555 IPR000700 PAS-associated, C-terminal THII_2555 IPR035965 PAS domain superfamily THII_2555 IPR005467 Histidine kinase domain THII_2555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2555 IPR013767 PAS fold THII_2555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2555 IPR003594 Histidine kinase/HSP90-like ATPase THII_2555 IPR014285 Nitrogen fixation negative regulator NifL THII_2555 IPR001610 PAC motif THII_2556 IPR009057 Homeobox-like domain superfamily THII_2556 IPR025944 Sigma-54 interaction domain, conserved site THII_2556 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_2556 IPR003018 GAF domain THII_2556 IPR029016 GAF-like domain superfamily THII_2556 IPR003593 AAA+ ATPase domain THII_2556 IPR002197 DNA binding HTH domain, Fis-type THII_2556 IPR010113 Nif-specific regulatory protein THII_2556 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2556 IPR002078 RNA polymerase sigma factor 54 interaction domain THII_2556 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_2564 IPR037021 RnfH superfamily THII_2564 IPR005346 RnfH protein THII_2564 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THII_2565 IPR003667 NqrDE/RnfAE THII_2565 IPR010968 Ion-translocating oxidoreductase complex subunit E THII_2566 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG THII_2566 IPR007329 FMN-binding THII_2567 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D THII_2567 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD THII_2568 IPR026902 RnfC Barrel sandwich hybrid domain THII_2568 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily THII_2568 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2568 IPR009051 Alpha-helical ferredoxin THII_2568 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC THII_2568 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain THII_2568 IPR019554 Soluble ligand binding domain THII_2568 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2569 IPR007202 4Fe-4S domain THII_2569 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2569 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria THII_2569 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB THII_2569 IPR011005 Dihydropteroate synthase-like THII_2569 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2570 IPR003667 NqrDE/RnfAE THII_2570 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA THII_2571 IPR000700 PAS-associated, C-terminal THII_2571 IPR000014 PAS domain THII_2571 IPR001610 PAC motif THII_2571 IPR014285 Nitrogen fixation negative regulator NifL THII_2571 IPR005467 Histidine kinase domain THII_2571 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2571 IPR003594 Histidine kinase/HSP90-like ATPase THII_2571 IPR013767 PAS fold THII_2571 IPR035965 PAS domain superfamily THII_2571 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2572 IPR003593 AAA+ ATPase domain THII_2572 IPR003018 GAF domain THII_2572 IPR025944 Sigma-54 interaction domain, conserved site THII_2572 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2572 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_2572 IPR002078 RNA polymerase sigma factor 54 interaction domain THII_2572 IPR010113 Nif-specific regulatory protein THII_2572 IPR002197 DNA binding HTH domain, Fis-type THII_2572 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_2572 IPR009057 Homeobox-like domain superfamily THII_2572 IPR029016 GAF-like domain superfamily THII_2574 IPR029060 PIN-like domain superfamily THII_2574 IPR002716 PIN domain THII_2574 IPR022907 VapC family THII_2578 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2578 IPR004573 rRNA small subunit methyltransferase B THII_2578 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type THII_2578 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site THII_2578 IPR023267 RNA (C5-cytosine) methyltransferase THII_2578 IPR006027 NusB/RsmB/TIM44 THII_2578 IPR035926 NusB-like superfamily THII_2580 IPR003660 HAMP domain THII_2580 IPR003594 Histidine kinase/HSP90-like ATPase THII_2580 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator THII_2580 IPR035965 PAS domain superfamily THII_2580 IPR000014 PAS domain THII_2580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2580 IPR013767 PAS fold THII_2580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2580 IPR005467 Histidine kinase domain THII_2581 IPR003593 AAA+ ATPase domain THII_2581 IPR011006 CheY-like superfamily THII_2581 IPR009057 Homeobox-like domain superfamily THII_2581 IPR002197 DNA binding HTH domain, Fis-type THII_2581 IPR001789 Signal transduction response regulator, receiver domain THII_2581 IPR002078 RNA polymerase sigma factor 54 interaction domain THII_2581 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_2581 IPR025944 Sigma-54 interaction domain, conserved site THII_2581 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2582 IPR036641 HPT domain superfamily THII_2582 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2582 IPR019247 Histidine kinase BarA, N-terminal THII_2582 IPR001789 Signal transduction response regulator, receiver domain THII_2582 IPR005467 Histidine kinase domain THII_2582 IPR011006 CheY-like superfamily THII_2582 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_2582 IPR003660 HAMP domain THII_2582 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2582 IPR003594 Histidine kinase/HSP90-like ATPase THII_2582 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2582 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2584 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily THII_2584 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain THII_2584 IPR008104 Macrophage infectivity potentiator THII_2584 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal THII_2588 IPR013430 Toxin-antitoxin system, antidote protein, HigA THII_2588 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THII_2588 IPR001387 Cro/C1-type helix-turn-helix domain THII_2589 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta THII_2589 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative THII_2589 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal THII_2589 IPR013760 DNA topoisomerase, type IIA-like domain superfamily THII_2589 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal THII_2589 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat THII_2589 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily THII_2594 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_2594 IPR020581 Glycine cleavage system P protein THII_2594 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 THII_2594 IPR015424 Pyridoxal phosphate-dependent transferase THII_2594 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_2595 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal THII_2595 IPR029045 ClpP/crotonase-like domain superfamily THII_2595 IPR001095 Acetyl-CoA carboxylase, alpha subunit THII_2597 IPR035958 SecB-like superfamily THII_2597 IPR003708 Bacterial protein export chaperone SecB THII_2598 IPR036873 Rhodanese-like domain superfamily THII_2598 IPR001763 Rhodanese-like domain THII_2600 IPR001845 HTH ArsR-type DNA-binding domain THII_2600 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2600 IPR036390 Winged helix DNA-binding domain superfamily THII_2600 IPR011991 ArsR-like helix-turn-helix domain THII_2602 IPR034408 Sulphate/thiosulphate-binding site THII_2602 IPR000957 Sulphate/thiosulphate-binding, conserved site THII_2602 IPR005669 Thiosulphate/Sulfate-binding protein THII_2603 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THII_2603 IPR011865 Sulphate ABC transporter, permease protein CysT THII_2603 IPR005667 Sulphate ABC transporter permease protein 2 THII_2603 IPR035906 MetI-like superfamily THII_2604 IPR035906 MetI-like superfamily THII_2604 IPR005667 Sulphate ABC transporter permease protein 2 THII_2604 IPR011866 Sulphate ABC transporter, permease protein CysW THII_2604 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THII_2605 IPR041193 CysA, C-terminal regulatory domain THII_2605 IPR003593 AAA+ ATPase domain THII_2605 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal THII_2605 IPR003439 ABC transporter-like THII_2605 IPR008995 Molybdate/tungstate binding, C-terminal THII_2605 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2605 IPR005666 Sulphate transport system permease protein 1 THII_2605 IPR017871 ABC transporter, conserved site THII_2605 IPR024765 TOBE-like domain THII_2606 IPR006842 Transposase (putative), YhgA-like THII_2606 IPR010106 Recombination-promoting nuclease RpnA THII_2609 IPR002099 DNA mismatch repair protein family, N-terminal THII_2609 IPR014762 DNA mismatch repair, conserved site THII_2609 IPR020667 DNA mismatch repair protein, MutL THII_2609 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2609 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms THII_2609 IPR014790 MutL, C-terminal, dimerisation THII_2609 IPR013507 DNA mismatch repair protein, S5 domain 2-like THII_2609 IPR042121 MutL, C-terminal domain, regulatory subdomain THII_2609 IPR037198 MutL, C-terminal domain superfamily THII_2609 IPR020568 Ribosomal protein S5 domain 2-type fold THII_2609 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_2609 IPR042120 MutL, C-terminal domain, dimerisation subdomain THII_2610 IPR023346 Lysozyme-like domain superfamily THII_2610 IPR023703 Membrane-bound lytic murein transglycosylase F THII_2610 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_2610 IPR000189 Prokaryotic transglycosylase, active site THII_2610 IPR008258 Transglycosylase SLT domain 1 THII_2611 IPR007862 Adenylate kinase, active site lid domain THII_2611 IPR000850 Adenylate kinase/UMP-CMP kinase THII_2611 IPR033690 Adenylate kinase, conserved site THII_2611 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2611 IPR006259 Adenylate kinase subfamily THII_2619 IPR038717 Tc1-like transposase, DDE domain THII_2622 IPR013815 ATP-grasp fold, subdomain 1 THII_2622 IPR008279 PEP-utilising enzyme, mobile domain THII_2622 IPR018274 PEP-utilising enzyme, active site THII_2622 IPR000121 PEP-utilising enzyme, C-terminal THII_2622 IPR023151 PEP-utilising enzyme, conserved site THII_2622 IPR036637 Phosphohistidine domain superfamily THII_2622 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding THII_2622 IPR010121 Pyruvate, phosphate dikinase THII_2622 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THII_2622 IPR040442 Pyruvate kinase-like domain superfamily THII_2628 IPR036762 IscX-like superfamily THII_2628 IPR007479 ISC system FeS cluster assembly, IscX THII_2629 IPR018298 Adrenodoxin, iron-sulphur binding site THII_2629 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THII_2629 IPR036010 2Fe-2S ferredoxin-like superfamily THII_2629 IPR001055 Adrenodoxin THII_2629 IPR012675 Beta-grasp domain superfamily THII_2629 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria THII_2630 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily THII_2630 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily THII_2630 IPR042039 HscA chaperone, nucleotide-binding domain THII_2630 IPR018181 Heat shock protein 70, conserved site THII_2630 IPR013126 Heat shock protein 70 family THII_2630 IPR010236 ISC system FeS cluster assembly, HscA chaperone THII_2631 IPR001623 DnaJ domain THII_2631 IPR004640 Co-chaperone Hsc20 THII_2631 IPR036386 HscB, C-terminal domain superfamily THII_2631 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain THII_2631 IPR036869 Chaperone J-domain superfamily THII_2632 IPR000361 FeS cluster biogenesis THII_2632 IPR011302 Iron-binding protein IscA, proteobacteria THII_2632 IPR035903 HesB-like domain superfamily THII_2632 IPR016092 FeS cluster insertion protein THII_2632 IPR017870 FeS cluster insertion, C-terminal, conserved site THII_2635 IPR011339 ISC system FeS cluster assembly, IscU scaffold THII_2635 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal THII_2636 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_2636 IPR016454 Cysteine desulfurase THII_2636 IPR015424 Pyridoxal phosphate-dependent transferase THII_2636 IPR010240 Cysteine desulfurase IscS THII_2636 IPR000192 Aminotransferase class V domain THII_2636 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_2636 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THII_2637 IPR030489 Transcription regulator Rrf2-type, conserved site THII_2637 IPR036390 Winged helix DNA-binding domain superfamily THII_2637 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2637 IPR010242 Transcription factor HTH, IscR THII_2637 IPR000944 Transcription regulator Rrf2-type THII_2638 IPR029044 Nucleotide-diphospho-sugar transferases THII_2640 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THII_2640 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL THII_2640 IPR001296 Glycosyl transferase, family 1 THII_2641 IPR013534 Starch synthase, catalytic domain THII_2641 IPR001296 Glycosyl transferase, family 1 THII_2641 IPR011835 Bacterial/plant glycogen synthase THII_2646 IPR020845 AMP-binding, conserved site THII_2646 IPR000873 AMP-dependent synthetase/ligase THII_2646 IPR042099 AMP-dependent synthetase-like superfamily THII_2647 IPR038765 Papain-like cysteine peptidase superfamily THII_2647 IPR036779 LysM domain superfamily THII_2647 IPR007921 CHAP domain THII_2647 IPR018392 LysM domain THII_2648 IPR036779 LysM domain superfamily THII_2648 IPR038765 Papain-like cysteine peptidase superfamily THII_2648 IPR018392 LysM domain THII_2648 IPR007921 CHAP domain THII_2650 IPR029052 Metallo-dependent phosphatase-like THII_2650 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type THII_2650 IPR006179 5'-Nucleotidase/apyrase THII_2650 IPR006146 5'-Nucleotidase, conserved site THII_2650 IPR036907 5'-Nucleotidase, C-terminal domain superfamily THII_2650 IPR008334 5'-Nucleotidase, C-terminal THII_2651 IPR027469 Cation efflux transmembrane domain superfamily THII_2651 IPR023500 Zinc transporter ZitB THII_2651 IPR002524 Cation efflux protein THII_2651 IPR036837 Cation efflux protein, cytoplasmic domain superfamily THII_2652 IPR032818 DedA family THII_2652 IPR032816 SNARE associated Golgi protein THII_2658 IPR010994 RuvA domain 2-like THII_2658 IPR004509 Competence protein ComEA, helix-hairpin-helix domain THII_2658 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 THII_2659 IPR023827 Peptidase S8, subtilisin, Asp-active site THII_2659 IPR022398 Peptidase S8, subtilisin, His-active site THII_2659 IPR023828 Peptidase S8, subtilisin, Ser-active site THII_2659 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 THII_2659 IPR036852 Peptidase S8/S53 domain superfamily THII_2659 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily THII_2659 IPR034202 Subtilisin Carlsberg-like catalytic domain THII_2659 IPR015500 Peptidase S8, subtilisin-related THII_2659 IPR000209 Peptidase S8/S53 domain THII_2662 IPR022907 VapC family THII_2662 IPR002716 PIN domain THII_2662 IPR029060 PIN-like domain superfamily THII_2663 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2663 IPR036678 MutS, connector domain superfamily THII_2663 IPR005748 DNA mismatch repair protein MutS THII_2663 IPR007695 DNA mismatch repair protein MutS-like, N-terminal THII_2663 IPR017261 DNA mismatch repair protein MutS/MSH THII_2663 IPR036187 DNA mismatch repair protein MutS, core domain superfamily THII_2663 IPR016151 DNA mismatch repair protein MutS, N-terminal THII_2663 IPR007696 DNA mismatch repair protein MutS, core THII_2663 IPR007861 DNA mismatch repair protein MutS, clamp THII_2663 IPR000432 DNA mismatch repair protein MutS, C-terminal THII_2663 IPR007860 DNA mismatch repair protein MutS, connector domain THII_2664 IPR029058 Alpha/Beta hydrolase fold THII_2664 IPR000073 Alpha/beta hydrolase fold-1 THII_2666 IPR038717 Tc1-like transposase, DDE domain THII_2670 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily THII_2670 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta THII_2670 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site THII_2670 IPR000228 RNA 3'-terminal phosphate cyclase THII_2670 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily THII_2670 IPR023797 RNA 3'-terminal phosphate cyclase domain THII_2670 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain THII_2670 IPR017770 RNA 3'-terminal phosphate cyclase type 1 THII_2673 IPR007484 Peptidase M28 THII_2673 IPR003137 PA domain THII_2673 IPR041756 Peptidase M28, SGAP-like THII_2678 IPR005911 Protein YhcC-like THII_2678 IPR039661 ELP3/YhcC THII_2678 IPR006638 Elp3/MiaB/NifB THII_2678 IPR032432 Radical SAM, C-terminal extension THII_2678 IPR007197 Radical SAM THII_2678 IPR023404 Radical SAM, alpha/beta horseshoe THII_2679 IPR018634 Chromate resistance exported protein THII_2681 IPR018634 Chromate resistance exported protein THII_2688 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal THII_2688 IPR024072 Dihydrofolate reductase-like domain superfamily THII_2689 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily THII_2689 IPR039901 3-deoxy-D-manno-octulosonic acid transferase THII_2689 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal THII_2691 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2691 IPR004033 UbiE/COQ5 methyltransferase THII_2691 IPR023576 UbiE/COQ5 methyltransferase, conserved site THII_2692 IPR000914 Solute-binding protein family 5 domain THII_2692 IPR023765 Solute-binding protein family 5, conserved site THII_2692 IPR039424 Solute-binding protein family 5 THII_2692 IPR030678 Peptide/nickel binding protein, MppA-type THII_2693 IPR000160 GGDEF domain THII_2693 IPR033424 Membrane-associated sensor domain THII_2693 IPR029787 Nucleotide cyclase THII_2694 IPR036921 PurM-like, N-terminal domain superfamily THII_2694 IPR010918 PurM-like, C-terminal domain THII_2694 IPR036676 PurM-like, C-terminal domain superfamily THII_2694 IPR011854 Carbamoyl dehydratase HypE THII_2694 IPR016188 PurM-like, N-terminal domain THII_2696 IPR006214 Bax inhibitor 1-related THII_2696 IPR006213 Bax inhibitor 1, conserved site THII_2698 IPR011335 Restriction endonuclease type II-like THII_2698 IPR008538 Domain of unknown function DUF820 THII_2699 IPR011006 CheY-like superfamily THII_2699 IPR001789 Signal transduction response regulator, receiver domain THII_2700 IPR000983 Bacterial general secretion pathway protein G-type pilin THII_2700 IPR013545 Type II secretion system protein G THII_2700 IPR010054 General secretion pathway protein G THII_2700 IPR012902 Prokaryotic N-terminal methylation site THII_2707 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2707 IPR025669 AAA domain THII_2708 IPR001091 Restriction/modification DNA-methylase THII_2708 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2708 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THII_2708 IPR002941 DNA methylase N-4/N-6 THII_2709 IPR002939 Chaperone DnaJ, C-terminal THII_2709 IPR008971 HSP40/DnaJ peptide-binding THII_2709 IPR012724 Chaperone DnaJ THII_2709 IPR001623 DnaJ domain THII_2709 IPR018253 DnaJ domain, conserved site THII_2709 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily THII_2709 IPR036869 Chaperone J-domain superfamily THII_2709 IPR001305 Heat shock protein DnaJ, cysteine-rich domain THII_2710 IPR012725 Chaperone DnaK THII_2710 IPR013126 Heat shock protein 70 family THII_2710 IPR018181 Heat shock protein 70, conserved site THII_2710 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily THII_2710 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily THII_2711 IPR000740 GrpE nucleotide exchange factor THII_2711 IPR013805 GrpE nucleotide exchange factor, coiled-coil THII_2711 IPR009012 GrpE nucleotide exchange factor, head THII_2712 IPR036390 Winged helix DNA-binding domain superfamily THII_2712 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily THII_2712 IPR002571 Heat-inducible transcription repressor HrcA THII_2712 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal THII_2712 IPR029016 GAF-like domain superfamily THII_2712 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain THII_2712 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2713 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal THII_2713 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal THII_2713 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily THII_2713 IPR002504 NAD kinase THII_2714 IPR035932 HflD-like superfamily THII_2714 IPR007451 High frequency lysogenization protein HflD THII_2716 IPR024230 GspL, cytoplasmic actin-ATPase-like domain THII_2716 IPR025691 GspL periplasmic domain THII_2716 IPR007812 Type II secretion system protein L THII_2717 IPR033713 Phosphatase NudJ THII_2717 IPR020476 NUDIX hydrolase THII_2717 IPR020084 NUDIX hydrolase, conserved site THII_2717 IPR015797 NUDIX hydrolase-like domain superfamily THII_2717 IPR000086 NUDIX hydrolase domain THII_2718 IPR023382 Adenine nucleotide alpha hydrolase-like domains THII_2718 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_2718 IPR004506 tRNA-specific 2-thiouridylase THII_2721 IPR036688 MoeA, C-terminal, domain IV superfamily THII_2721 IPR036425 MoaB/Mog-like domain superfamily THII_2721 IPR001453 MoaB/Mog domain THII_2721 IPR008284 Molybdenum cofactor biosynthesis, conserved site THII_2721 IPR036135 MoeA, N-terminal and linker domain superfamily THII_2721 IPR005110 MoeA, N-terminal and linker domain THII_2721 IPR038987 Molybdopterin biosynthesis protein MoeA-like THII_2721 IPR005111 MoeA, C-terminal, domain IV THII_2722 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding THII_2722 IPR013328 6-phosphogluconate dehydrogenase, domain 2 THII_2722 IPR006114 6-phosphogluconate dehydrogenase, C-terminal THII_2722 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating THII_2722 IPR006184 6-phosphogluconate-binding site THII_2722 IPR006183 6-phosphogluconate dehydrogenase THII_2722 IPR036291 NAD(P)-binding domain superfamily THII_2722 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THII_2724 IPR009000 Translation protein, beta-barrel domain superfamily THII_2724 IPR000795 Transcription factor, GTP-binding domain THII_2724 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal THII_2724 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle THII_2724 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal THII_2724 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2724 IPR031157 Tr-type G domain, conserved site THII_2724 IPR033720 Elongation factor Tu, domain 2 THII_2724 IPR004161 Translation elongation factor EFTu-like, domain 2 THII_2724 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain THII_2724 IPR005225 Small GTP-binding protein domain THII_2725 IPR005807 SecE subunit of protein translocation complex, bacterial-like THII_2725 IPR038379 SecE superfamily THII_2725 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit THII_2726 IPR008991 Translation protein SH3-like domain superfamily THII_2726 IPR006645 NusG, N-terminal THII_2726 IPR036735 NusG, N-terminal domain superfamily THII_2726 IPR014722 Ribosomal protein L2, domain 2 THII_2726 IPR001062 Transcription antitermination protein, NusG THII_2726 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site THII_2726 IPR005824 KOW THII_2727 IPR020783 Ribosomal protein L11, C-terminal THII_2727 IPR006519 Ribosomal protein L11, bacterial-type THII_2727 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily THII_2727 IPR000911 Ribosomal protein L11/L12 THII_2727 IPR020784 Ribosomal protein L11, N-terminal THII_2727 IPR020785 Ribosomal protein L11, conserved site THII_2727 IPR036769 Ribosomal protein L11, C-terminal domain superfamily THII_2728 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich THII_2728 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein THII_2728 IPR023674 Ribosomal protein L1-like THII_2728 IPR023673 Ribosomal protein L1, conserved site THII_2728 IPR002143 Ribosomal protein L1 THII_2728 IPR005878 Ribosomal protein L1, bacterial-type THII_2729 IPR001790 Ribosomal protein L10P THII_2729 IPR002363 Ribosomal protein L10, eubacterial, conserved site THII_2729 IPR022973 Ribosomal protein L10 THII_2730 IPR000206 Ribosomal protein L7/L12 THII_2730 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily THII_2730 IPR008932 Ribosomal protein L7/L12, oligomerisation THII_2730 IPR013823 Ribosomal protein L7/L12, C-terminal THII_2730 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like THII_2731 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain THII_2731 IPR007644 RNA polymerase, beta subunit, protrusion THII_2731 IPR014724 RNA polymerase Rpb2, OB-fold THII_2731 IPR007641 RNA polymerase Rpb2, domain 7 THII_2731 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily THII_2731 IPR007121 RNA polymerase, beta subunit, conserved site THII_2731 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily THII_2731 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type THII_2731 IPR007645 RNA polymerase Rpb2, domain 3 THII_2731 IPR037034 RNA polymerase Rpb2, domain 2 superfamily THII_2731 IPR007642 RNA polymerase Rpb2, domain 2 THII_2731 IPR015712 DNA-directed RNA polymerase, subunit 2 THII_2731 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain THII_2732 IPR007066 RNA polymerase Rpb1, domain 3 THII_2732 IPR000722 RNA polymerase, alpha subunit THII_2732 IPR006592 RNA polymerase, N-terminal THII_2732 IPR007080 RNA polymerase Rpb1, domain 1 THII_2732 IPR042102 RNA polymerase Rpb1, domain 3 superfamily THII_2732 IPR007083 RNA polymerase Rpb1, domain 4 THII_2732 IPR007081 RNA polymerase Rpb1, domain 5 THII_2732 IPR038120 RNA polymerase Rpb1, funnel domain superfamily THII_2732 IPR012754 DNA-directed RNA polymerase, subunit beta-prime THII_2735 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2735 IPR017871 ABC transporter, conserved site THII_2735 IPR003439 ABC transporter-like THII_2735 IPR003593 AAA+ ATPase domain THII_2736 IPR000412 ABC-2 transporter THII_2738 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2738 IPR003439 ABC transporter-like THII_2738 IPR003593 AAA+ ATPase domain THII_2738 IPR017871 ABC transporter, conserved site THII_2738 IPR015854 ABC transporter, lipoprotein release, LolD THII_2747 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2747 IPR004576 Transcription-repair coupling factor THII_2747 IPR001650 Helicase, C-terminal THII_2747 IPR005118 Transcription-repair-coupling factor, C-terminal domain THII_2747 IPR041471 UvrB, interaction domain THII_2747 IPR036101 CarD-like/TRCF domain superfamily THII_2747 IPR011545 DEAD/DEAH box helicase domain THII_2747 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_2747 IPR037235 TRCF-like, C-terminal domain THII_2747 IPR003711 CarD-like/TRCF domain THII_2748 IPR002310 Glycine-tRNA ligase, alpha subunit THII_2748 IPR006194 Glycine-tRNA synthetase, heterodimeric THII_2749 IPR008909 DALR anticodon binding THII_2749 IPR006194 Glycine-tRNA synthetase, heterodimeric THII_2749 IPR015944 Glycine-tRNA ligase, beta subunit THII_2751 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase THII_2751 IPR036157 dUTPase-like superfamily THII_2751 IPR029054 dUTPase-like THII_2751 IPR033704 dUTPase, trimeric THII_2752 IPR025944 Sigma-54 interaction domain, conserved site THII_2752 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_2752 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_2752 IPR001789 Signal transduction response regulator, receiver domain THII_2752 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2752 IPR002197 DNA binding HTH domain, Fis-type THII_2752 IPR009057 Homeobox-like domain superfamily THII_2752 IPR011006 CheY-like superfamily THII_2752 IPR003593 AAA+ ATPase domain THII_2752 IPR002078 RNA polymerase sigma factor 54 interaction domain THII_2753 IPR000014 PAS domain THII_2753 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2753 IPR005467 Histidine kinase domain THII_2753 IPR003594 Histidine kinase/HSP90-like ATPase THII_2753 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2753 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2753 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2755 IPR011605 NusB antitermination factor THII_2755 IPR035926 NusB-like superfamily THII_2755 IPR006027 NusB/RsmB/TIM44 THII_2756 IPR036467 Lumazine/riboflavin synthase superfamily THII_2756 IPR034964 Lumazine synthase THII_2756 IPR002180 Lumazine/riboflavin synthase THII_2757 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB THII_2757 IPR036144 RibA-like superfamily THII_2757 IPR032677 GTP cyclohydrolase II THII_2757 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THII_2760 IPR036291 NAD(P)-binding domain superfamily THII_2760 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain THII_2760 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal THII_2760 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 THII_2760 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 THII_2761 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal THII_2762 IPR034300 NADP transhydrogenase beta-like domain THII_2762 IPR012136 NADP transhydrogenase, beta subunit THII_2762 IPR029035 DHS-like NAD/FAD-binding domain superfamily THII_2763 IPR012156 Cold shock, CspA THII_2763 IPR011129 Cold shock domain THII_2763 IPR012340 Nucleic acid-binding, OB-fold THII_2763 IPR002059 Cold-shock protein, DNA-binding THII_2763 IPR019844 Cold-shock (CSD) domain THII_2764 IPR016166 FAD-binding domain, PCMH-type THII_2764 IPR036318 FAD-binding, type PCMH-like superfamily THII_2764 IPR016164 FAD-linked oxidase-like, C-terminal THII_2764 IPR004113 FAD-linked oxidase, C-terminal THII_2764 IPR004490 Glycolate oxidase subunit GlcD THII_2764 IPR006094 FAD linked oxidase, N-terminal THII_2764 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 THII_2770 IPR025161 Putative transposase IS4/IS5 family THII_2771 IPR003439 ABC transporter-like THII_2771 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2771 IPR017871 ABC transporter, conserved site THII_2771 IPR005898 Cyclic peptide transporter THII_2771 IPR036640 ABC transporter type 1, transmembrane domain superfamily THII_2771 IPR011527 ABC transporter type 1, transmembrane domain THII_2771 IPR003593 AAA+ ATPase domain THII_2776 IPR013785 Aldolase-type TIM barrel THII_2776 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme THII_2776 IPR007197 Radical SAM THII_2776 IPR023885 4Fe4S-binding SPASM domain THII_2780 IPR000917 Sulfatase, N-terminal THII_2780 IPR024607 Sulfatase, conserved site THII_2780 IPR017850 Alkaline-phosphatase-like, core domain superfamily THII_2781 IPR017850 Alkaline-phosphatase-like, core domain superfamily THII_2781 IPR024607 Sulfatase, conserved site THII_2781 IPR000917 Sulfatase, N-terminal THII_2782 IPR036736 ACP-like superfamily THII_2782 IPR010080 Thioester reductase-like domain THII_2782 IPR009081 Phosphopantetheine binding ACP domain THII_2782 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THII_2782 IPR036291 NAD(P)-binding domain superfamily THII_2782 IPR013120 Male sterility, NAD-binding THII_2783 IPR009081 Phosphopantetheine binding ACP domain THII_2783 IPR020802 Polyketide synthase, thioesterase domain THII_2783 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THII_2783 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2783 IPR001031 Thioesterase THII_2783 IPR036637 Phosphohistidine domain superfamily THII_2783 IPR006162 Phosphopantetheine attachment site THII_2783 IPR010071 Amino acid adenylation domain THII_2783 IPR010060 Non-ribosomal peptide synthase THII_2783 IPR029058 Alpha/Beta hydrolase fold THII_2783 IPR036736 ACP-like superfamily THII_2783 IPR025110 AMP-binding enzyme, C-terminal domain THII_2783 IPR020845 AMP-binding, conserved site THII_2783 IPR000873 AMP-dependent synthetase/ligase THII_2783 IPR042099 AMP-dependent synthetase-like superfamily THII_2783 IPR008279 PEP-utilising enzyme, mobile domain THII_2783 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily THII_2783 IPR001242 Condensation domain THII_2783 IPR000253 Forkhead-associated (FHA) domain THII_2783 IPR013216 Methyltransferase type 11 THII_2785 IPR004556 Methyltransferase HemK-like THII_2785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2785 IPR007848 Methyltransferase small domain THII_2785 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THII_2785 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase THII_2788 IPR013149 Alcohol dehydrogenase, C-terminal THII_2788 IPR020843 Polyketide synthase, enoylreductase domain THII_2788 IPR036291 NAD(P)-binding domain superfamily THII_2788 IPR011032 GroES-like superfamily THII_2788 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site THII_2788 IPR013154 Alcohol dehydrogenase, N-terminal THII_2790 IPR023299 P-type ATPase, cytoplasmic domain N THII_2790 IPR001757 P-type ATPase THII_2790 IPR027256 P-type ATPase, subfamily IB THII_2790 IPR023214 HAD superfamily THII_2790 IPR036412 HAD-like superfamily THII_2790 IPR008250 P-type ATPase, A domain superfamily THII_2790 IPR018303 P-type ATPase, phosphorylation site THII_2790 IPR023298 P-type ATPase, transmembrane domain superfamily THII_2793 IPR001757 P-type ATPase THII_2793 IPR027256 P-type ATPase, subfamily IB THII_2793 IPR023214 HAD superfamily THII_2793 IPR036412 HAD-like superfamily THII_2793 IPR008250 P-type ATPase, A domain superfamily THII_2793 IPR023298 P-type ATPase, transmembrane domain superfamily THII_2793 IPR018303 P-type ATPase, phosphorylation site THII_2793 IPR023299 P-type ATPase, cytoplasmic domain N THII_2794 IPR036736 ACP-like superfamily THII_2794 IPR003231 Acyl carrier protein (ACP) THII_2794 IPR009081 Phosphopantetheine binding ACP domain THII_2794 IPR006162 Phosphopantetheine attachment site THII_2795 IPR004498 Ribosomal protein L11 methyltransferase THII_2795 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2796 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THII_2796 IPR001242 Condensation domain THII_2796 IPR009081 Phosphopantetheine binding ACP domain THII_2796 IPR006162 Phosphopantetheine attachment site THII_2796 IPR010071 Amino acid adenylation domain THII_2796 IPR029058 Alpha/Beta hydrolase fold THII_2796 IPR036736 ACP-like superfamily THII_2796 IPR025110 AMP-binding enzyme, C-terminal domain THII_2796 IPR020845 AMP-binding, conserved site THII_2796 IPR010060 Non-ribosomal peptide synthase THII_2796 IPR000873 AMP-dependent synthetase/ligase THII_2796 IPR042099 AMP-dependent synthetase-like superfamily THII_2796 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily THII_2797 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily THII_2797 IPR002800 Chorismate pyruvate-lyase Rv2949c-like THII_2799 IPR038152 Carbamoyltransferase, C-terminal domain superfamily THII_2799 IPR031730 Carbamoyltransferase, C-terminal THII_2799 IPR003696 Carbamoyltransferase THII_2800 IPR010723 HemN, C-terminal THII_2800 IPR006638 Elp3/MiaB/NifB THII_2800 IPR023404 Radical SAM, alpha/beta horseshoe THII_2800 IPR007197 Radical SAM THII_2800 IPR004559 Heme chaperone HemW-like THII_2800 IPR034505 Anaerobic coproporphyrinogen-III oxidase THII_2803 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THII_2803 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site THII_2803 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain THII_2803 IPR020921 Erythronate-4-phosphate dehydrogenase THII_2803 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain THII_2803 IPR038251 PdxB, dimerisation domain superfamily THII_2803 IPR036291 NAD(P)-binding domain superfamily THII_2805 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 THII_2805 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site THII_2805 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2805 IPR002938 FAD-binding domain THII_2806 IPR010663 Zinc finger, FPG/IleRS-type THII_2806 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain THII_2806 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type THII_2806 IPR010979 Ribosomal protein S13-like, H2TH THII_2806 IPR035937 MutM-like, N-terminal THII_2806 IPR020629 Formamidopyrimidine-DNA glycosylase THII_2806 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding THII_2806 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site THII_2810 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily THII_2810 IPR003732 D-aminoacyl-tRNA deacylase DTD THII_2811 IPR020081 SsrA-binding protein, conserved site THII_2811 IPR000037 SsrA-binding protein THII_2811 IPR023620 Small protein B THII_2812 IPR023393 START-like domain superfamily THII_2812 IPR005031 Coenzyme Q-binding protein COQ10, START domain THII_2813 IPR037021 RnfH superfamily THII_2813 IPR005346 RnfH protein THII_2813 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THII_2814 IPR026592 Outer membrane protein assembly factor BamE THII_2814 IPR037873 BamE-like THII_2814 IPR007450 Lipoprotein SmpA/OmlA THII_2815 IPR002481 Ferric-uptake regulator THII_2815 IPR036390 Winged helix DNA-binding domain superfamily THII_2815 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2825 IPR022892 Ribonuclease HI THII_2825 IPR036397 Ribonuclease H superfamily THII_2825 IPR002156 Ribonuclease H domain THII_2825 IPR012337 Ribonuclease H-like superfamily THII_2826 IPR026669 Arsenite methyltransferase-like THII_2826 IPR013216 Methyltransferase type 11 THII_2826 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2827 IPR004401 Nucleoid-associated protein YbaB/EbfC family THII_2827 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily THII_2828 IPR003593 AAA+ ATPase domain THII_2828 IPR022754 DNA polymerase III, gamma subunit, domain III THII_2828 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV THII_2828 IPR012763 DNA polymerase III, subunit gamma/ tau THII_2828 IPR021029 DNA polymerase III, tau subunit, domain V THII_2828 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2828 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily THII_2828 IPR001270 ClpA/B family THII_2828 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal THII_2836 IPR036259 MFS transporter superfamily THII_2836 IPR011701 Major facilitator superfamily THII_2836 IPR023727 Lysophospholipid transporter LplT THII_2838 IPR001789 Signal transduction response regulator, receiver domain THII_2838 IPR007492 LytTR DNA-binding domain THII_2838 IPR011006 CheY-like superfamily THII_2840 IPR000352 Peptide chain release factor class I THII_2840 IPR005139 Peptide chain release factor THII_2840 IPR004373 Peptide chain release factor 1 THII_2841 IPR018214 Glutamyl-tRNA reductase, conserved site THII_2841 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily THII_2841 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily THII_2841 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain THII_2841 IPR036291 NAD(P)-binding domain superfamily THII_2841 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal THII_2841 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase THII_2841 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase THII_2843 IPR010054 General secretion pathway protein G THII_2843 IPR000983 Bacterial general secretion pathway protein G-type pilin THII_2843 IPR012902 Prokaryotic N-terminal methylation site THII_2843 IPR013545 Type II secretion system protein G THII_2844 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III THII_2844 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily THII_2844 IPR005843 Alpha-D-phosphohexomutase, C-terminal THII_2844 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III THII_2844 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I THII_2844 IPR005841 Alpha-D-phosphohexomutase superfamily THII_2844 IPR016066 Alpha-D-phosphohexomutase, conserved site THII_2844 IPR006352 Phosphoglucosamine mutase, bacterial type THII_2844 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II THII_2848 IPR036390 Winged helix DNA-binding domain superfamily THII_2848 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2848 IPR000847 Transcription regulator HTH, LysR THII_2848 IPR005119 LysR, substrate-binding THII_2850 IPR002549 Transmembrane protein TqsA-like THII_2851 IPR007829 TM2 domain THII_2859 IPR000890 Aliphatic acid kinase, short-chain THII_2859 IPR004372 Acetate/propionate kinase THII_2859 IPR023865 Aliphatic acid kinase, short-chain, conserved site THII_2875 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily THII_2875 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily THII_2875 IPR009056 Cytochrome c-like domain THII_2875 IPR036909 Cytochrome c-like domain superfamily THII_2877 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily THII_2877 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily THII_2878 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2878 IPR000485 AsnC-type HTH domain THII_2878 IPR040523 AsnC-like ligand binding domain THII_2878 IPR019888 Transcription regulator AsnC-type THII_2879 IPR040523 AsnC-like ligand binding domain THII_2880 IPR040523 AsnC-like ligand binding domain THII_2880 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2881 IPR040523 AsnC-like ligand binding domain THII_2882 IPR007197 Radical SAM THII_2882 IPR010505 Molybdenum cofactor synthesis C-terminal THII_2882 IPR013483 Molybdenum cofactor biosynthesis protein A THII_2882 IPR006638 Elp3/MiaB/NifB THII_2882 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site THII_2882 IPR013785 Aldolase-type TIM barrel THII_2884 IPR002429 Cytochrome c oxidase subunit II-like C-terminal THII_2884 IPR001505 Copper centre Cu(A) THII_2884 IPR011045 Nitrous oxide reductase, N-terminal THII_2884 IPR015943 WD40/YVTN repeat-like-containing domain superfamily THII_2884 IPR008972 Cupredoxin THII_2884 IPR034205 Nitrous-oxide reductase, C-terminal THII_2884 IPR023644 Nitrous-oxide reductase THII_2884 IPR041114 Nitrous oxide reductase, propeller repeat 1 THII_2884 IPR041142 Nitrous oxide reductase, propeller repeat 2 THII_2884 IPR006311 Twin-arginine translocation pathway, signal sequence THII_2884 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_2885 IPR009056 Cytochrome c-like domain THII_2885 IPR036909 Cytochrome c-like domain superfamily THII_2885 IPR024167 Cytochrome c4-like THII_2889 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2889 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2889 IPR004494 MauM/NapG ferredoxin-type protein THII_2889 IPR006311 Twin-arginine translocation pathway, signal sequence THII_2891 IPR003439 ABC transporter-like THII_2891 IPR003593 AAA+ ATPase domain THII_2891 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2907 IPR018274 PEP-utilising enzyme, active site THII_2907 IPR000121 PEP-utilising enzyme, C-terminal THII_2907 IPR023151 PEP-utilising enzyme, conserved site THII_2907 IPR036637 Phosphohistidine domain superfamily THII_2907 IPR008279 PEP-utilising enzyme, mobile domain THII_2907 IPR008731 Phosphotransferase system, enzyme I N-terminal THII_2907 IPR006318 Phosphotransferase system, enzyme I-like THII_2907 IPR036618 PtsI, HPr-binding domain superfamily THII_2907 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THII_2907 IPR040442 Pyruvate kinase-like domain superfamily THII_2907 IPR024692 Phosphotransferase system, enzyme I THII_2908 IPR002114 Phosphotransferase system, HPr serine phosphorylation site THII_2908 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site THII_2908 IPR035895 HPr-like superfamily THII_2908 IPR000032 Phosphocarrier protein HPr-like THII_2910 IPR005337 RapZ-like family THII_2910 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2911 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site THII_2911 IPR042172 Adenosylhomocysteinase-like superfamily THII_2911 IPR036291 NAD(P)-binding domain superfamily THII_2911 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain THII_2911 IPR000043 Adenosylhomocysteinase-like THII_2912 IPR022629 S-adenosylmethionine synthetase, central domain THII_2912 IPR002133 S-adenosylmethionine synthetase THII_2912 IPR022628 S-adenosylmethionine synthetase, N-terminal THII_2912 IPR022630 S-adenosylmethionine synthetase, C-terminal THII_2912 IPR022631 S-adenosylmethionine synthetase, conserved site THII_2912 IPR022636 S-adenosylmethionine synthetase superfamily THII_2913 IPR004468 CTP synthase THII_2913 IPR017926 Glutamine amidotransferase THII_2913 IPR017456 CTP synthase, N-terminal THII_2913 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2913 IPR029062 Class I glutamine amidotransferase-like THII_2913 IPR033828 CTP synthase GATase domain THII_2914 IPR012761 RNA polymerase sigma factor RpoS THII_2914 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_2914 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2914 IPR007630 RNA polymerase sigma-70 region 4 THII_2914 IPR007624 RNA polymerase sigma-70 region 3 THII_2914 IPR007627 RNA polymerase sigma-70 region 2 THII_2914 IPR009042 RNA polymerase sigma-70 region 1.2 THII_2914 IPR000943 RNA polymerase sigma-70 THII_2914 IPR014284 RNA polymerase sigma-70 like domain THII_2914 IPR013325 RNA polymerase sigma factor, region 2 THII_2917 IPR001684 Ribosomal protein L27 THII_2917 IPR018261 Ribosomal protein L27, conserved site THII_2918 IPR031167 OBG-type guanine nucleotide-binding (G) domain THII_2918 IPR006073 GTP binding domain THII_2918 IPR035101 GTP-binding protein, Obg-type THII_2918 IPR014100 GTP-binding protein Obg/CgtA THII_2918 IPR006074 GTP1/OBG, conserved site THII_2918 IPR006169 GTP1/OBG domain THII_2918 IPR036726 GTP1/OBG domain superfamily THII_2918 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2922 IPR036086 ParB/Sulfiredoxin superfamily THII_2922 IPR004437 ParB/RepB/Spo0J partition protein THII_2922 IPR003115 ParB/Sulfiredoxin THII_2925 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2925 IPR004386 Toxin-antitoxin system, YafQ-like toxin THII_2925 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family THII_2931 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain THII_2931 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit THII_2931 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily THII_2931 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal THII_2931 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal THII_2932 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THII_2932 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily THII_2932 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal THII_2932 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain THII_2932 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site THII_2932 IPR003593 AAA+ ATPase domain THII_2932 IPR005722 ATP synthase, F1 complex, beta subunit THII_2932 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2933 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily THII_2933 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site THII_2933 IPR000131 ATP synthase, F1 complex, gamma subunit THII_2935 IPR017938 Riboflavin synthase-like beta-barrel THII_2935 IPR026017 Lumazine-binding domain THII_2935 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily THII_2935 IPR001783 Lumazine-binding protein THII_2936 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site THII_2936 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily THII_2936 IPR000793 ATP synthase, alpha subunit, C-terminal THII_2936 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily THII_2936 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain THII_2936 IPR005294 ATP synthase, F1 complex, alpha subunit THII_2936 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain THII_2936 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily THII_2936 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THII_2936 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2937 IPR000711 ATPase, OSCP/delta subunit THII_2937 IPR020781 ATPase, OSCP/delta subunit, conserved site THII_2937 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily THII_2938 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily THII_2938 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast THII_2938 IPR005864 ATP synthase, F0 complex, subunit b, bacterial THII_2939 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast THII_2939 IPR038662 F1F0 ATP synthase subunit C superfamily THII_2939 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site THII_2939 IPR002379 V-ATPase proteolipid subunit C-like domain THII_2939 IPR035921 F/V-ATP synthase subunit C superfamily THII_2939 IPR000454 ATP synthase, F0 complex, subunit C THII_2940 IPR000568 ATP synthase, F0 complex, subunit A THII_2940 IPR023011 ATP synthase, F0 complex, subunit A, active site THII_2940 IPR035908 ATP synthase, F0 complex, subunit A superfamily THII_2942 IPR035965 PAS domain superfamily THII_2942 IPR001633 EAL domain THII_2942 IPR035919 EAL domain superfamily THII_2942 IPR003018 GAF domain THII_2942 IPR029016 GAF-like domain superfamily THII_2942 IPR000160 GGDEF domain THII_2942 IPR013767 PAS fold THII_2942 IPR000700 PAS-associated, C-terminal THII_2942 IPR000014 PAS domain THII_2942 IPR029787 Nucleotide cyclase THII_2942 IPR001610 PAC motif THII_2945 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 THII_2945 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THII_2946 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THII_2946 IPR003918 NADH:ubiquinone oxidoreductase THII_2946 IPR010227 NADH-quinone oxidoreductase, chain M/4 THII_2946 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal THII_2947 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup THII_2947 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 THII_2947 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THII_2947 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal THII_2948 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like THII_2948 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K THII_2949 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 THII_2949 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ THII_2952 IPR010226 NADH-quinone oxidoreductase, chain I THII_2952 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2952 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2953 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site THII_2953 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H THII_2954 IPR036010 2Fe-2S ferredoxin-like superfamily THII_2954 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THII_2954 IPR006656 Molybdopterin oxidoreductase THII_2954 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain THII_2954 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site THII_2954 IPR010228 NADH:ubiquinone oxidoreductase, subunit G THII_2954 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding THII_2954 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal THII_2959 IPR011060 Ribulose-phosphate binding barrel THII_2959 IPR018204 Tryptophan synthase, alpha chain, active site THII_2959 IPR002028 Tryptophan synthase, alpha chain THII_2959 IPR013785 Aldolase-type TIM barrel THII_2960 IPR001926 Pyridoxal-phosphate dependent enzyme THII_2960 IPR006653 Tryptophan synthase, beta chain, conserved site THII_2960 IPR006654 Tryptophan synthase, beta chain THII_2960 IPR023026 Tryptophan synthase beta chain/beta chain-like THII_2960 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THII_2963 IPR035919 EAL domain superfamily THII_2963 IPR000014 PAS domain THII_2963 IPR035965 PAS domain superfamily THII_2963 IPR013656 PAS fold-4 THII_2963 IPR000160 GGDEF domain THII_2963 IPR029787 Nucleotide cyclase THII_2963 IPR001633 EAL domain THII_2964 IPR019734 Tetratricopeptide repeat THII_2964 IPR013026 Tetratricopeptide repeat-containing domain THII_2964 IPR011990 Tetratricopeptide-like helical domain superfamily THII_2966 IPR005135 Endonuclease/exonuclease/phosphatase THII_2966 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_2966 IPR020848 AP endonuclease 1, conserved site THII_2966 IPR020847 AP endonuclease 1, binding site THII_2966 IPR004808 AP endonuclease 1 THII_2967 IPR041108 Polyphosphate kinase, C-terminal domain 1 THII_2967 IPR003414 Polyphosphate kinase THII_2967 IPR036832 Polyphosphate kinase N-terminal domain superfamily THII_2967 IPR025198 Polyphosphate kinase N-terminal domain THII_2967 IPR036830 Polyphosphate kinase middle domain superfamily THII_2967 IPR024953 Polyphosphate kinase middle domain THII_2967 IPR025200 Polyphosphate kinase C-terminal domain 2 THII_2969 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_2969 IPR001789 Signal transduction response regulator, receiver domain THII_2969 IPR036641 HPT domain superfamily THII_2969 IPR019247 Histidine kinase BarA, N-terminal THII_2969 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2969 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2969 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2969 IPR011006 CheY-like superfamily THII_2969 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2969 IPR003594 Histidine kinase/HSP90-like ATPase THII_2969 IPR003660 HAMP domain THII_2969 IPR005467 Histidine kinase domain THII_2971 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THII_2971 IPR032678 tRNA synthetases class I, catalytic domain THII_2971 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_2971 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase THII_2971 IPR015803 Cysteine-tRNA ligase THII_2971 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR THII_2972 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_2972 IPR000700 PAS-associated, C-terminal THII_2972 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_2972 IPR003594 Histidine kinase/HSP90-like ATPase THII_2972 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_2972 IPR005467 Histidine kinase domain THII_2972 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2973 IPR003593 AAA+ ATPase domain THII_2973 IPR003495 CobW/HypB/UreG, nucleotide-binding domain THII_2973 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2973 IPR004392 Hydrogenase maturation factor HypB THII_2975 IPR011006 CheY-like superfamily THII_2975 IPR001789 Signal transduction response regulator, receiver domain THII_2975 IPR037522 HD-GYP domain THII_2975 IPR003607 HD/PDEase domain THII_2976 IPR000160 GGDEF domain THII_2976 IPR035919 EAL domain superfamily THII_2976 IPR001633 EAL domain THII_2976 IPR005330 MHYT domain THII_2976 IPR029787 Nucleotide cyclase THII_2977 IPR013369 Type II secretion system GspE THII_2977 IPR001482 Type II/IV secretion system protein THII_2977 IPR003593 AAA+ ATPase domain THII_2977 IPR037257 General secretory system II, protein E, N-terminal superfamily THII_2977 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2979 IPR001296 Glycosyl transferase, family 1 THII_2979 IPR014267 Glycosyltransferase Gtf1 THII_2980 IPR001608 Alanine racemase, N-terminal THII_2980 IPR029066 PLP-binding barrel THII_2980 IPR011078 Pyridoxal phosphate homeostasis protein THII_2981 IPR002078 RNA polymerase sigma factor 54 interaction domain THII_2981 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_2981 IPR009057 Homeobox-like domain superfamily THII_2981 IPR011006 CheY-like superfamily THII_2981 IPR003593 AAA+ ATPase domain THII_2981 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2981 IPR001789 Signal transduction response regulator, receiver domain THII_2981 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_2981 IPR025944 Sigma-54 interaction domain, conserved site THII_2982 IPR036510 Ribosomal protein S20 superfamily THII_2982 IPR002583 Ribosomal protein S20 THII_2986 IPR036515 Transposase IS200-like superfamily THII_2986 IPR002686 Transposase IS200-like THII_2987 IPR025714 Methyltransferase domain THII_2987 IPR018773 Methyltransferase regulatory domain, predicted THII_2987 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2988 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THII_2988 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site THII_2988 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 THII_2988 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain THII_2988 IPR036291 NAD(P)-binding domain superfamily THII_3000 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THII_3000 IPR001278 Arginine-tRNA ligase THII_3000 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily THII_3000 IPR035684 Arginyl-tRNA synthetase, catalytic core domain THII_3000 IPR008909 DALR anticodon binding THII_3000 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THII_3000 IPR005148 Arginyl tRNA synthetase N-terminal domain THII_3001 IPR009614 Toxin YoeB THII_3001 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_3006 IPR004161 Translation elongation factor EFTu-like, domain 2 THII_3006 IPR000795 Transcription factor, GTP-binding domain THII_3006 IPR009000 Translation protein, beta-barrel domain superfamily THII_3006 IPR005517 Translation elongation factor EFG/EF2, domain IV THII_3006 IPR000640 Elongation factor EFG, domain V-like THII_3006 IPR035649 EFG, domain V THII_3006 IPR035647 EF-G domain III/V-like THII_3006 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3006 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_3006 IPR041095 Elongation Factor G, domain II THII_3006 IPR009022 Elongation factor G, domain III THII_3006 IPR020568 Ribosomal protein S5 domain 2-type fold THII_3006 IPR005225 Small GTP-binding protein domain THII_3008 IPR040982 DNA polymerase III alpha subunit finger domain THII_3008 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type THII_3008 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain THII_3008 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain THII_3008 IPR004013 PHP domain THII_3008 IPR016195 Polymerase/histidinol phosphatase-like THII_3008 IPR003141 Polymerase/histidinol phosphatase, N-terminal THII_3008 IPR004805 DNA polymerase III, alpha subunit THII_3008 IPR029460 DNA polymerase, helix-hairpin-helix motif THII_3016 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3016 IPR004604 DNA recombination/repair protein RecN THII_3016 IPR003395 RecF/RecN/SMC, N-terminal THII_3018 IPR036318 FAD-binding, type PCMH-like superfamily THII_3018 IPR016166 FAD-binding domain, PCMH-type THII_3018 IPR016167 FAD-binding, type PCMH, subdomain 1 THII_3018 IPR007173 D-arabinono-1,4-lactone oxidase THII_3018 IPR006094 FAD linked oxidase, N-terminal THII_3018 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_3019 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain THII_3019 IPR036676 PurM-like, C-terminal domain superfamily THII_3019 IPR036921 PurM-like, N-terminal domain superfamily THII_3019 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily THII_3019 IPR029062 Class I glutamine amidotransferase-like THII_3019 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal THII_3019 IPR017926 Glutamine amidotransferase THII_3019 IPR010918 PurM-like, C-terminal domain THII_3019 IPR010073 Phosphoribosylformylglycinamidine synthase PurL THII_3020 IPR001633 EAL domain THII_3020 IPR000160 GGDEF domain THII_3020 IPR029016 GAF-like domain superfamily THII_3020 IPR003018 GAF domain THII_3020 IPR035919 EAL domain superfamily THII_3020 IPR029787 Nucleotide cyclase THII_3020 IPR016132 Phytochrome chromophore attachment domain THII_3020 IPR001294 Phytochrome THII_3020 IPR013515 Phytochrome, central region THII_3021 IPR006680 Amidohydrolase-related THII_3021 IPR023512 Deaminase MtaD/DadD THII_3021 IPR032466 Metal-dependent hydrolase THII_3021 IPR011059 Metal-dependent hydrolase, composite domain superfamily THII_3022 IPR013785 Aldolase-type TIM barrel THII_3022 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal THII_3027 IPR005116 Transport-associated OB, type 1 THII_3027 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3027 IPR000847 Transcription regulator HTH, LysR THII_3027 IPR003725 Molybdenum-binding protein ModE, N-terminal THII_3027 IPR016462 Molybdate-dependent transcriptional regulator ModE THII_3027 IPR036390 Winged helix DNA-binding domain superfamily THII_3027 IPR004606 Molybdenum-pterin binding THII_3027 IPR008995 Molybdate/tungstate binding, C-terminal THII_3028 IPR005950 Molybdate ABC transporter, substrate-binding protein THII_3031 IPR002035 von Willebrand factor, type A THII_3031 IPR036465 von Willebrand factor A-like domain superfamily THII_3033 IPR003594 Histidine kinase/HSP90-like ATPase THII_3033 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3033 IPR005467 Histidine kinase domain THII_3033 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3033 IPR000014 PAS domain THII_3033 IPR035965 PAS domain superfamily THII_3033 IPR013767 PAS fold THII_3033 IPR021766 Phosphate regulon sensor protein PhoR THII_3033 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3033 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3033 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR THII_3034 IPR001789 Signal transduction response regulator, receiver domain THII_3034 IPR039420 Transcriptional regulatory protein WalR-like THII_3034 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3034 IPR001867 OmpR/PhoB-type DNA-binding domain THII_3034 IPR011006 CheY-like superfamily THII_3034 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB THII_3035 IPR029056 Ribokinase-like THII_3035 IPR011611 Carbohydrate kinase PfkB THII_3035 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site THII_3036 IPR000719 Protein kinase domain THII_3036 IPR017441 Protein kinase, ATP binding site THII_3036 IPR008271 Serine/threonine-protein kinase, active site THII_3036 IPR011009 Protein kinase-like domain superfamily THII_3037 IPR036457 PPM-type phosphatase domain superfamily THII_3037 IPR015655 Protein phosphatase 2C family THII_3037 IPR001932 PPM-type phosphatase domain THII_3038 IPR036457 PPM-type phosphatase domain superfamily THII_3038 IPR015655 Protein phosphatase 2C family THII_3038 IPR001932 PPM-type phosphatase domain THII_3039 IPR004564 Outer membrane lipoprotein carrier protein LolA-like THII_3039 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria THII_3039 IPR029046 Lipoprotein localisation LolA/LolB/LppX THII_3042 IPR001633 EAL domain THII_3042 IPR035919 EAL domain superfamily THII_3042 IPR003018 GAF domain THII_3042 IPR029016 GAF-like domain superfamily THII_3042 IPR013515 Phytochrome, central region THII_3042 IPR016132 Phytochrome chromophore attachment domain THII_3042 IPR001294 Phytochrome THII_3042 IPR000160 GGDEF domain THII_3042 IPR029787 Nucleotide cyclase THII_3043 IPR037522 HD-GYP domain THII_3043 IPR021800 Domain of unknown function DUF3369 THII_3043 IPR001789 Signal transduction response regulator, receiver domain THII_3043 IPR003607 HD/PDEase domain THII_3043 IPR011006 CheY-like superfamily THII_3044 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3044 IPR024519 Inverse autotransporter, beta-domain THII_3044 IPR008964 Invasin/intimin cell-adhesion fragments THII_3044 IPR022409 PKD/Chitinase domain THII_3044 IPR018392 LysM domain THII_3044 IPR038177 Inverse autotransporter, beta-domain superfamily THII_3044 IPR013783 Immunoglobulin-like fold THII_3044 IPR003535 Intimin/invasin bacterial adhesion mediator protein THII_3044 IPR015217 Invasin, domain 3 THII_3049 IPR005790 DNA polymerase III, delta subunit THII_3049 IPR032780 DNA polymerase III subunit delta, C-terminal THII_3049 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal THII_3049 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3049 IPR010372 DNA polymerase III delta, N-terminal THII_3051 IPR035246 Spermidine synthase, tetramerisation domain THII_3051 IPR030373 Polyamine biosynthesis domain, conserved site THII_3051 IPR030374 Polyamine biosynthesis domain THII_3051 IPR037163 Spermidine synthase, tetramerisation domain superfamily THII_3051 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3051 IPR001045 Spermidine/spermine synthases THII_3052 IPR000537 UbiA prenyltransferase family THII_3052 IPR039653 Prenyltransferase THII_3052 IPR023214 HAD superfamily THII_3052 IPR036412 HAD-like superfamily THII_3057 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase THII_3057 IPR011051 RmlC-like cupin domain superfamily THII_3057 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal THII_3057 IPR005835 Nucleotidyl transferase domain THII_3057 IPR029044 Nucleotide-diphospho-sugar transferases THII_3057 IPR014710 RmlC-like jelly roll fold THII_3058 IPR023753 FAD/NAD(P)-binding domain THII_3058 IPR028261 Dihydroprymidine dehydrogenase domain II THII_3058 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3058 IPR009051 Alpha-helical ferredoxin THII_3058 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 THII_3059 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THII_3059 IPR022278 Phosphoserine aminotransferase THII_3059 IPR015424 Pyridoxal phosphate-dependent transferase THII_3059 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_3059 IPR000192 Aminotransferase class V domain THII_3059 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_3060 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 THII_3060 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THII_3060 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site THII_3060 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain THII_3060 IPR002912 ACT domain THII_3060 IPR006236 D-3-phosphoglycerate dehydrogenase THII_3060 IPR029009 Allosteric substrate binding domain superfamily THII_3060 IPR036291 NAD(P)-binding domain superfamily THII_3062 IPR003594 Histidine kinase/HSP90-like ATPase THII_3062 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3062 IPR005467 Histidine kinase domain THII_3062 IPR013727 Two-component sensor kinase, N-terminal THII_3062 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3062 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3062 IPR003660 HAMP domain THII_3062 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3063 IPR039420 Transcriptional regulatory protein WalR-like THII_3063 IPR011006 CheY-like superfamily THII_3063 IPR001867 OmpR/PhoB-type DNA-binding domain THII_3063 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3063 IPR001789 Signal transduction response regulator, receiver domain THII_3068 IPR025867 MnmE, helical domain THII_3068 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3068 IPR031168 TrmE-type guanine nucleotide-binding domain THII_3068 IPR018948 GTP-binding protein TrmE, N-terminal THII_3068 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 THII_3068 IPR004520 tRNA modification GTPase MnmE THII_3068 IPR027368 tRNA modification GTPase MnmE domain 2 THII_3068 IPR006073 GTP binding domain THII_3068 IPR005225 Small GTP-binding protein domain THII_3070 IPR002035 von Willebrand factor, type A THII_3070 IPR036465 von Willebrand factor A-like domain superfamily THII_3072 IPR011335 Restriction endonuclease type II-like THII_3072 IPR041500 RecC, C-terminal THII_3072 IPR006697 RecBCD enzyme subunit RecC THII_3072 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3072 IPR013986 DExx box DNA helicase domain superfamily THII_3074 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily THII_3074 IPR022941 Signal recognition particle, SRP54 subunit THII_3074 IPR004780 Signal recognition particle protein THII_3074 IPR004125 Signal recognition particle, SRP54 subunit, M-domain THII_3074 IPR013822 Signal recognition particle SRP54, helical bundle THII_3074 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily THII_3074 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain THII_3074 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3074 IPR003593 AAA+ ATPase domain THII_3075 IPR003439 ABC transporter-like THII_3075 IPR017871 ABC transporter, conserved site THII_3075 IPR032781 ABC-transporter extension domain THII_3075 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3075 IPR003593 AAA+ ATPase domain THII_3080 IPR022310 NAD/GMP synthase THII_3080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3080 IPR003010 Carbon-nitrogen hydrolase THII_3080 IPR036526 Carbon-nitrogen hydrolase superfamily THII_3080 IPR003694 NAD(+) synthetase THII_3080 IPR014445 Glutamine-dependent NAD(+) synthetase THII_3081 IPR008867 Thiazole synthase THII_3081 IPR033983 Thiazole synthase ThiG THII_3081 IPR013785 Aldolase-type TIM barrel THII_3085 IPR007415 Nitrogenase MoFe maturation protein, NifZ THII_3086 IPR004893 Nitrogen fixation protein NifW THII_3087 IPR011990 Tetratricopeptide-like helical domain superfamily THII_3088 IPR013477 Homocitrate synthase NifV-like THII_3088 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site THII_3088 IPR000891 Pyruvate carboxyltransferase THII_3088 IPR013785 Aldolase-type TIM barrel THII_3092 IPR024705 Spermatogenesis-associated protein 20 THII_3092 IPR004879 Domain of unknown function DUF255 THII_3092 IPR012341 Six-hairpin glycosidase-like superfamily THII_3092 IPR008928 Six-hairpin glycosidase superfamily THII_3092 IPR036249 Thioredoxin-like superfamily THII_3093 IPR004620 5,10-methylenetetrahydrofolate reductase THII_3093 IPR003171 Methylenetetrahydrofolate reductase THII_3093 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase THII_3093 IPR029041 FAD-linked oxidoreductase-like THII_3094 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_3094 IPR010114 DNA-binding transcriptional regulator NtrC THII_3094 IPR011006 CheY-like superfamily THII_3094 IPR009057 Homeobox-like domain superfamily THII_3094 IPR002078 RNA polymerase sigma factor 54 interaction domain THII_3094 IPR002197 DNA binding HTH domain, Fis-type THII_3094 IPR025944 Sigma-54 interaction domain, conserved site THII_3094 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_3094 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3094 IPR001789 Signal transduction response regulator, receiver domain THII_3094 IPR003593 AAA+ ATPase domain THII_3095 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3095 IPR036366 PGBD superfamily THII_3095 IPR003593 AAA+ ATPase domain THII_3095 IPR036365 PGBD-like superfamily THII_3095 IPR002477 Peptidoglycan binding-like THII_3096 IPR005644 NolW-like THII_3096 IPR038591 NolW-like superfamily THII_3096 IPR001775 GspD/PilQ family THII_3096 IPR013356 Type II secretion system GspD THII_3096 IPR004845 Type II secretion system GspD, conserved site THII_3096 IPR004846 Type II/III secretion system THII_3097 IPR002696 Putative membrane protein insertion efficiency factor THII_3098 IPR003111 Lon, substrate-binding domain THII_3098 IPR003959 ATPase, AAA-type, core THII_3098 IPR008268 Peptidase S16, active site THII_3098 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3098 IPR020568 Ribosomal protein S5 domain 2-type fold THII_3098 IPR015947 PUA-like superfamily THII_3098 IPR003593 AAA+ ATPase domain THII_3098 IPR008269 Peptidase S16, Lon proteolytic domain THII_3098 IPR027065 Lon protease THII_3098 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_3098 IPR004815 Lon protease, bacterial/eukaryotic-type THII_3098 IPR027543 Lon protease, bacterial THII_3099 IPR011129 Cold shock domain THII_3099 IPR040476 RNase II/RNase R, cold shock domain THII_3099 IPR012340 Nucleic acid-binding, OB-fold THII_3099 IPR013223 Ribonuclease B, N-terminal OB domain THII_3099 IPR022966 Ribonuclease II/R, conserved site THII_3099 IPR001900 Ribonuclease II/R THII_3099 IPR013668 Ribonuclease R winged-helix domain THII_3099 IPR022967 RNA-binding domain, S1 THII_3099 IPR003029 S1 domain THII_3099 IPR004476 Ribonuclease II/ribonuclease R THII_3099 IPR011805 Ribonuclease R THII_3102 IPR000644 CBS domain THII_3102 IPR002550 CNNM, transmembrane domain THII_3102 IPR036318 FAD-binding, type PCMH-like superfamily THII_3102 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_3102 IPR005170 Transporter-associated domain THII_3105 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_3105 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_3105 IPR011802 Adenylylsulphate reductase, beta subunit THII_3105 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal THII_3105 IPR038465 APS reductase, beta subunit, C-terminal domain superfamily THII_3106 IPR011803 Adenylylsulphate reductase, alpha subunit THII_3106 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain THII_3106 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily THII_3106 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily THII_3106 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3107 IPR016047 Peptidase M23 THII_3107 IPR011055 Duplicated hybrid motif THII_3107 IPR018392 LysM domain THII_3107 IPR013731 Opacity-associated protein A, N-terminal THII_3111 IPR009056 Cytochrome c-like domain THII_3111 IPR036909 Cytochrome c-like domain superfamily THII_3111 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit THII_3113 IPR003593 AAA+ ATPase domain THII_3113 IPR003838 ABC transporter permease protein domain THII_3113 IPR003439 ABC transporter-like THII_3113 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3113 IPR025857 MacB-like periplasmic core domain THII_3113 IPR017911 ABC transporter, macrolide export, ATP-binding domain THII_3113 IPR017871 ABC transporter, conserved site THII_3114 IPR003838 ABC transporter permease protein domain THII_3114 IPR003593 AAA+ ATPase domain THII_3114 IPR017911 ABC transporter, macrolide export, ATP-binding domain THII_3114 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3114 IPR003439 ABC transporter-like THII_3114 IPR017871 ABC transporter, conserved site THII_3114 IPR025857 MacB-like periplasmic core domain THII_3119 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain THII_3119 IPR036291 NAD(P)-binding domain superfamily THII_3119 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3120 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase THII_3120 IPR003362 Bacterial sugar transferase THII_3121 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_3121 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_3121 IPR015424 Pyridoxal phosphate-dependent transferase THII_3121 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_3123 IPR001296 Glycosyl transferase, family 1 THII_3123 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THII_3125 IPR006975 NifQ THII_3126 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THII_3126 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site THII_3126 IPR012675 Beta-grasp domain superfamily THII_3126 IPR036010 2Fe-2S ferredoxin-like superfamily THII_3127 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site THII_3127 IPR012675 Beta-grasp domain superfamily THII_3127 IPR036010 2Fe-2S ferredoxin-like superfamily THII_3127 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THII_3128 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_3128 IPR001279 Metallo-beta-lactamase THII_3128 IPR029039 Flavoprotein-like superfamily THII_3128 IPR001226 Flavodoxin, conserved site THII_3128 IPR008254 Flavodoxin/nitric oxide synthase THII_3128 IPR016440 Rubredoxin-oxygen oxidoreductase THII_3129 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_3129 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_3130 IPR013785 Aldolase-type TIM barrel THII_3130 IPR034165 FeMo cofactor biosynthesis protein NifB, C-terminal THII_3130 IPR005980 Nitrogenase cofactor biosynthesis protein NifB THII_3130 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site THII_3130 IPR006638 Elp3/MiaB/NifB THII_3130 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THII_3130 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis THII_3130 IPR007197 Radical SAM THII_3133 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3133 IPR023753 FAD/NAD(P)-binding domain THII_3133 IPR041364 Rubredoxin binding domain THII_3134 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3134 IPR012340 Nucleic acid-binding, OB-fold THII_3134 IPR030391 RNA methyltransferase TrmA, conserved site THII_3134 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD THII_3134 IPR010280 (Uracil-5)-methyltransferase family THII_3134 IPR002792 TRAM domain THII_3138 IPR018170 Aldo/keto reductase, conserved site THII_3138 IPR023210 NADP-dependent oxidoreductase domain THII_3138 IPR036812 NADP-dependent oxidoreductase domain superfamily THII_3138 IPR020471 Aldo/keto reductase THII_3139 IPR038765 Papain-like cysteine peptidase superfamily THII_3139 IPR020472 G-protein beta WD-40 repeat THII_3139 IPR001680 WD40 repeat THII_3139 IPR019775 WD40 repeat, conserved site THII_3139 IPR029030 Caspase-like domain superfamily THII_3139 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain THII_3139 IPR017986 WD40-repeat-containing domain THII_3139 IPR036322 WD40-repeat-containing domain superfamily THII_3139 IPR015943 WD40/YVTN repeat-like-containing domain superfamily THII_3139 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3140 IPR017986 WD40-repeat-containing domain THII_3140 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain THII_3140 IPR029030 Caspase-like domain superfamily THII_3140 IPR036322 WD40-repeat-containing domain superfamily THII_3140 IPR020472 G-protein beta WD-40 repeat THII_3140 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3140 IPR038765 Papain-like cysteine peptidase superfamily THII_3140 IPR001680 WD40 repeat THII_3140 IPR019775 WD40 repeat, conserved site THII_3140 IPR015943 WD40/YVTN repeat-like-containing domain superfamily THII_3141 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase THII_3141 IPR029787 Nucleotide cyclase THII_3141 IPR018297 Adenylyl cyclase class-4/guanylyl cyclase, conserved site THII_3145 IPR011006 CheY-like superfamily THII_3145 IPR003594 Histidine kinase/HSP90-like ATPase THII_3145 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3145 IPR005467 Histidine kinase domain THII_3145 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3145 IPR036641 HPT domain superfamily THII_3145 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3145 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_3145 IPR001789 Signal transduction response regulator, receiver domain THII_3145 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3147 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_3147 IPR007711 Toxin HigB-1 THII_3148 IPR013430 Toxin-antitoxin system, antidote protein, HigA THII_3148 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THII_3148 IPR001387 Cro/C1-type helix-turn-helix domain THII_3151 IPR000715 Glycosyl transferase, family 4 THII_3151 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site THII_3153 IPR001915 Peptidase M48 THII_3154 IPR011335 Restriction endonuclease type II-like THII_3154 IPR008538 Domain of unknown function DUF820 THII_3156 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head THII_3156 IPR008949 Isoprenoid synthase domain superfamily THII_3156 IPR019845 Squalene/phytoene synthase, conserved site THII_3157 IPR016450 Uncharacterised conserved protein UCP005522 THII_3157 IPR007302 Circularly permuted ATPgrasp domain THII_3161 IPR005653 Organic solvent tolerance-like, N-terminal THII_3161 IPR020889 LPS-assembly protein LptD THII_3161 IPR007543 LptD, C-terminal THII_3162 IPR028923 SAICAR synthetase/ADE2, N-terminal THII_3162 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase THII_3162 IPR018236 SAICAR synthetase, conserved site THII_3165 IPR003568 Cytochrome c-type biogenesis protein CcmF THII_3165 IPR002541 Cytochrome c assembly protein THII_3165 IPR003567 Cytochrome c-type biogenesis protein THII_3165 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal THII_3166 IPR004329 CcmE/CycJ protein THII_3166 IPR036127 CcmE-like superfamily THII_3167 IPR007078 Haem exporter protein D (CcmD) THII_3168 IPR005950 Molybdate ABC transporter, substrate-binding protein THII_3169 IPR004090 Chemotaxis methyl-accepting receptor THII_3169 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site THII_3169 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily THII_3169 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding THII_3169 IPR003660 HAMP domain THII_3169 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_3173 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3173 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl THII_3173 IPR003593 AAA+ ATPase domain THII_3173 IPR003439 ABC transporter-like THII_3173 IPR017871 ABC transporter, conserved site THII_3176 IPR011004 Trimeric LpxA-like superfamily THII_3176 IPR001451 Hexapeptide repeat THII_3177 IPR033719 N-acetylglutamate synthase, kinase-like domain THII_3177 IPR010167 Amino-acid N-acetyltransferase THII_3177 IPR000182 GNAT domain THII_3177 IPR001048 Aspartate/glutamate/uridylate kinase THII_3177 IPR016181 Acyl-CoA N-acyltransferase THII_3177 IPR036393 Acetylglutamate kinase-like superfamily THII_3179 IPR002933 Peptidase M20 THII_3179 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site THII_3179 IPR036264 Bacterial exopeptidase dimerisation domain THII_3179 IPR011650 Peptidase M20, dimerisation domain THII_3179 IPR010169 Acetylornithine deacetylase ArgE THII_3180 IPR019833 Manganese/iron superoxide dismutase, binding site THII_3180 IPR001189 Manganese/iron superoxide dismutase THII_3180 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily THII_3180 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily THII_3180 IPR019832 Manganese/iron superoxide dismutase, C-terminal THII_3180 IPR019831 Manganese/iron superoxide dismutase, N-terminal THII_3186 IPR041128 Arginine decarboxylase, C-terminal helical THII_3186 IPR000183 Ornithine/DAP/Arg decarboxylase THII_3186 IPR002985 Arginine decarboxylase THII_3186 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site THII_3186 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal THII_3186 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site THII_3186 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal THII_3186 IPR029066 PLP-binding barrel THII_3186 IPR040634 Arginine decarboxylase, helical bundle domain THII_3187 IPR008136 CinA, C-terminal THII_3187 IPR036653 CinA-like, C-terminal THII_3192 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site THII_3192 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal THII_3192 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site THII_3192 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal THII_3192 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase THII_3192 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THII_3192 IPR023962 Probable phosphoketolase THII_3192 IPR029061 Thiamin diphosphate-binding fold THII_3194 IPR004629 Glycosyl transferase WecB/TagA/CpsF THII_3194 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase THII_3196 IPR007197 Radical SAM THII_3196 IPR006158 Cobalamin (vitamin B12)-binding domain THII_3196 IPR020612 Methylthiotransferase, conserved site THII_3196 IPR036724 Cobalamin-binding domain superfamily THII_3196 IPR034529 2-hydroxyethylphosphonate methyltransferase fom3-like THII_3196 IPR006638 Elp3/MiaB/NifB THII_3196 IPR023404 Radical SAM, alpha/beta horseshoe THII_3198 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_3198 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_3198 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_3198 IPR015424 Pyridoxal phosphate-dependent transferase THII_3200 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D THII_3200 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD THII_3203 IPR014710 RmlC-like jelly roll fold THII_3203 IPR008894 WxcM-like, C-terminal THII_3203 IPR011051 RmlC-like cupin domain superfamily THII_3206 IPR036412 HAD-like superfamily THII_3206 IPR023214 HAD superfamily THII_3206 IPR041492 Haloacid dehalogenase-like hydrolase THII_3206 IPR006439 HAD hydrolase, subfamily IA THII_3206 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THII_3208 IPR001679 NAD-dependent DNA ligase THII_3208 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type THII_3208 IPR010994 RuvA domain 2-like THII_3208 IPR036420 BRCT domain superfamily THII_3208 IPR001357 BRCT domain THII_3208 IPR018239 NAD-dependent DNA ligase, active site THII_3208 IPR033136 NAD-dependent DNA ligase, conserved site THII_3208 IPR004150 NAD-dependent DNA ligase, OB-fold THII_3208 IPR012340 Nucleic acid-binding, OB-fold THII_3208 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 THII_3208 IPR013840 NAD-dependent DNA ligase, N-terminal THII_3208 IPR041663 DisA/LigA, helix-hairpin-helix motif THII_3208 IPR013839 NAD-dependent DNA ligase, adenylation THII_3210 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding THII_3210 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_3210 IPR004090 Chemotaxis methyl-accepting receptor THII_3210 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site THII_3210 IPR003660 HAMP domain THII_3210 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily THII_3211 IPR008538 Domain of unknown function DUF820 THII_3211 IPR011335 Restriction endonuclease type II-like THII_3213 IPR036046 Acylphosphatase-like domain superfamily THII_3213 IPR001792 Acylphosphatase-like domain THII_3213 IPR017968 Acylphosphatase, conserved site THII_3213 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THII_3213 IPR011125 Zinc finger, HypF-type THII_3213 IPR004421 Carbamoyltransferase, HypF-type THII_3213 IPR006070 YrdC-like domain THII_3213 IPR041440 HypF, Kae1-like domain THII_3222 IPR011054 Rudiment single hybrid motif THII_3222 IPR016185 Pre-ATP-grasp domain superfamily THII_3222 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase THII_3222 IPR011761 ATP-grasp fold THII_3222 IPR013815 ATP-grasp fold, subdomain 1 THII_3222 IPR005481 Biotin carboxylase-like, N-terminal domain THII_3222 IPR011764 Biotin carboxylation domain THII_3222 IPR005482 Biotin carboxylase, C-terminal THII_3222 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain THII_3223 IPR001249 Acetyl-CoA biotin carboxyl carrier THII_3223 IPR001882 Biotin-binding site THII_3223 IPR000089 Biotin/lipoyl attachment THII_3223 IPR011053 Single hybrid motif THII_3224 IPR036441 Dehydroquinase, class II superfamily THII_3224 IPR001874 Dehydroquinase, class II THII_3224 IPR018509 Dehydroquinase, class II, conserved site THII_3225 IPR008271 Serine/threonine-protein kinase, active site THII_3225 IPR011009 Protein kinase-like domain superfamily THII_3225 IPR005543 PASTA domain THII_3225 IPR000719 Protein kinase domain THII_3228 IPR006143 RND efflux pump, membrane fusion protein THII_3228 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THII_3228 IPR022824 Multidrug resistance protein MdtA THII_3229 IPR001036 Acriflavin resistance protein THII_3229 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_3232 IPR036063 Smr domain superfamily THII_3232 IPR002625 Smr domain THII_3232 IPR022990 Uncharacterised protein family UPF0115 THII_3233 IPR022418 Porphobilinogen deaminase, C-terminal THII_3233 IPR022417 Porphobilinogen deaminase, N-terminal THII_3233 IPR000860 Porphobilinogen deaminase THII_3233 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily THII_3233 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site THII_3234 IPR025669 AAA domain THII_3234 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3240 IPR012341 Six-hairpin glycosidase-like superfamily THII_3240 IPR010383 Glycosyl hydrolase 94 THII_3240 IPR009342 Putative carbohydrate binding domain THII_3240 IPR019282 Domain of unknown function DUF2329 THII_3240 IPR011013 Galactose mutarotase-like domain superfamily THII_3240 IPR033432 Glycosyl hydrolase 36, catalytic domain THII_3240 IPR037824 NdvB, GH94N domain 2 THII_3240 IPR037820 NdvB, GH94N domain 1 THII_3240 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily THII_3240 IPR008928 Six-hairpin glycosidase superfamily THII_3247 IPR008462 CsbD-like domain THII_3247 IPR026042 Stress response protein YjbJ THII_3247 IPR036629 YjbJ superfamily THII_3251 IPR005616 CcmH/CycL/Ccl2/NrfF family THII_3251 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily THII_3252 IPR017560 Cytochrome c-type biogenesis protein CcmI THII_3252 IPR013026 Tetratricopeptide repeat-containing domain THII_3252 IPR011990 Tetratricopeptide-like helical domain superfamily THII_3252 IPR019734 Tetratricopeptide repeat THII_3258 IPR006258 Dihydrolipoamide dehydrogenase THII_3258 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3258 IPR023753 FAD/NAD(P)-binding domain THII_3258 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily THII_3258 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I THII_3258 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THII_3258 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site THII_3261 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_3261 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE THII_3261 IPR009010 Aspartate decarboxylase-like domain superfamily THII_3261 IPR006657 Molybdopterin dinucleotide-binding domain THII_3261 IPR006656 Molybdopterin oxidoreductase THII_3261 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain THII_3261 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site THII_3261 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site THII_3261 IPR006311 Twin-arginine translocation pathway, signal sequence THII_3262 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_3262 IPR014297 Dimethylsulphoxide reductase, chain B THII_3262 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_3270 IPR008707 PilC beta-propeller domain THII_3270 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily THII_3278 IPR005139 Peptide chain release factor THII_3278 IPR004374 Peptide chain release factor 2 THII_3278 IPR000352 Peptide chain release factor class I THII_3279 IPR005526 Septum formation inhibitor MinC, C-terminal THII_3279 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily THII_3279 IPR007874 Septum formation inhibitor MinC, N-terminal THII_3279 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily THII_3279 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal THII_3279 IPR013033 Septum formation inhibitor MinC THII_3280 IPR025501 ATP binding protein MinD THII_3280 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain THII_3280 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3280 IPR010223 ATP binding protein MinD, bacterial-type THII_3281 IPR036707 Cell division topological specificity factor MinE superfamily THII_3281 IPR005527 Cell division topological specificity factor MinE THII_3285 IPR013785 Aldolase-type TIM barrel THII_3285 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 THII_3285 IPR041071 DAHP synthase ferredoxin-like domain THII_3285 IPR006218 DAHP synthetase I/KDSA THII_3286 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3286 IPR008220 Homoserine/serine acetyltransferase MetX-like THII_3286 IPR000073 Alpha/beta hydrolase fold-1 THII_3286 IPR029058 Alpha/Beta hydrolase fold THII_3286 IPR010743 Methionine biosynthesis MetW THII_3287 IPR008220 Homoserine/serine acetyltransferase MetX-like THII_3287 IPR029058 Alpha/Beta hydrolase fold THII_3287 IPR000073 Alpha/beta hydrolase fold-1 THII_3288 IPR029028 Alpha/beta knot methyltransferases THII_3288 IPR001537 tRNA/rRNA methyltransferase, SpoU type THII_3288 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase THII_3288 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THII_3289 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein THII_3289 IPR037026 Vgr protein, OB-fold domain superfamily THII_3289 IPR006531 Gp5 N-terminal THII_3289 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset THII_3297 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_3297 IPR036165 YefM-like superfamily THII_3299 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type THII_3299 IPR036451 Cobalamin adenosyltransferase-like superfamily THII_3299 IPR016030 Cobalamin adenosyltransferase-like THII_3300 IPR001992 Type II secretion system conserved site THII_3300 IPR018076 Type II secretion system F domain THII_3300 IPR042094 Type II secretion system F domain superfamily THII_3300 IPR003004 GspF/PilC family THII_3300 IPR011850 General secretion pathway protein F THII_3303 IPR036249 Thioredoxin-like superfamily THII_3303 IPR019479 Peroxiredoxin, C-terminal THII_3303 IPR024706 Peroxiredoxin, AhpC-type THII_3303 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant THII_3303 IPR013766 Thioredoxin domain THII_3307 IPR013785 Aldolase-type TIM barrel THII_3307 IPR008567 3-keto-5-aminohexanoate cleavage enzyme THII_3308 IPR000182 GNAT domain THII_3308 IPR010167 Amino-acid N-acetyltransferase THII_3308 IPR016181 Acyl-CoA N-acyltransferase THII_3310 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3310 IPR000847 Transcription regulator HTH, LysR THII_3310 IPR005119 LysR, substrate-binding THII_3310 IPR036390 Winged helix DNA-binding domain superfamily THII_3311 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily THII_3311 IPR036422 RuBisCO large subunit, N-terminal domain superfamily THII_3311 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I THII_3311 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal THII_3311 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site THII_3311 IPR033966 RuBisCO THII_3311 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal THII_3312 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily THII_3312 IPR000894 Ribulose bisphosphate carboxylase small chain, domain THII_3315 IPR029014 [NiFe]-hydrogenase, large subunit THII_3315 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site THII_3315 IPR001501 Nickel-dependent hydrogenase, large subunit THII_3316 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3316 IPR013216 Methyltransferase type 11 THII_3316 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC THII_3319 IPR038078 PhoU-like domain superfamily THII_3319 IPR026022 PhoU domain THII_3319 IPR028366 Phosphate transport system protein PhoU THII_3320 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3320 IPR015850 ABC transporter, phosphate import, PstB THII_3320 IPR005670 Phosphate transport system permease protein 1 THII_3320 IPR003439 ABC transporter-like THII_3320 IPR017871 ABC transporter, conserved site THII_3320 IPR003593 AAA+ ATPase domain THII_3321 IPR011864 Phosphate ABC transporter, permease protein PstC THII_3321 IPR035906 MetI-like superfamily THII_3321 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THII_3322 IPR011864 Phosphate ABC transporter, permease protein PstC THII_3322 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THII_3322 IPR035906 MetI-like superfamily THII_3323 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily THII_3323 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family THII_3325 IPR007360 Invasion gene expression up-regulator, SirB THII_3330 IPR035917 YjbQ-like superfamily THII_3330 IPR001602 Uncharacterised protein family UPF0047 THII_3331 IPR007476 Putative exonuclease, RdgC THII_3338 IPR013785 Aldolase-type TIM barrel THII_3338 IPR000771 Fructose-bisphosphate aldolase, class-II THII_3338 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype THII_3339 IPR036918 Pyruvate kinase, C-terminal domain superfamily THII_3339 IPR015795 Pyruvate kinase, C-terminal THII_3339 IPR015793 Pyruvate kinase, barrel THII_3339 IPR018209 Pyruvate kinase, active site THII_3339 IPR011037 Pyruvate kinase-like, insert domain superfamily THII_3339 IPR040442 Pyruvate kinase-like domain superfamily THII_3339 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THII_3339 IPR015806 Pyruvate kinase, insert domain superfamily THII_3339 IPR001697 Pyruvate kinase THII_3340 IPR001576 Phosphoglycerate kinase THII_3340 IPR015911 Phosphoglycerate kinase, conserved site THII_3340 IPR015824 Phosphoglycerate kinase, N-terminal THII_3340 IPR036043 Phosphoglycerate kinase superfamily THII_3341 IPR011332 Zinc-binding ribosomal protein THII_3341 IPR018264 Ribosomal protein L33, conserved site THII_3341 IPR001705 Ribosomal protein L33 THII_3341 IPR038584 Ribosomal protein L33 superfamily THII_3343 IPR004223 Vitamin B12-dependent methionine synthase, activation domain THII_3343 IPR000489 Pterin-binding domain THII_3343 IPR036594 Methionine synthase domain THII_3343 IPR011822 Cobalamin-dependent methionine synthase THII_3343 IPR036724 Cobalamin-binding domain superfamily THII_3343 IPR006158 Cobalamin (vitamin B12)-binding domain THII_3343 IPR036589 Homocysteine-binding domain superfamily THII_3343 IPR003726 Homocysteine-binding domain THII_3343 IPR011005 Dihydropteroate synthase-like THII_3343 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily THII_3343 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain THII_3343 IPR033706 Methionine synthase, B12-binding domain THII_3345 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_3345 IPR011006 CheY-like superfamily THII_3345 IPR001789 Signal transduction response regulator, receiver domain THII_3345 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_3345 IPR036641 HPT domain superfamily THII_3345 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3345 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3345 IPR005467 Histidine kinase domain THII_3345 IPR003594 Histidine kinase/HSP90-like ATPase THII_3345 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3347 IPR027378 Cyclic nucleotide-regulated ion channel, N-terminal THII_3347 IPR018490 Cyclic nucleotide-binding-like THII_3347 IPR018488 Cyclic nucleotide-binding, conserved site THII_3347 IPR000595 Cyclic nucleotide-binding domain THII_3347 IPR013099 Potassium channel domain THII_3347 IPR014710 RmlC-like jelly roll fold THII_3350 IPR017806 Ergothioneine biosynthesis protein EgtB THII_3350 IPR032890 Hercynine oxygenase, Actinobacteria THII_3350 IPR005532 Sulfatase-modifying factor enzyme THII_3350 IPR034660 DinB/YfiT-like putative metalloenzymes THII_3350 IPR016187 C-type lectin fold THII_3350 IPR024775 DinB-like domain THII_3350 IPR042095 Sulfatase-modifying factor enzyme superfamily THII_3351 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3351 IPR019257 Histidine-specific methyltransferase, SAM-dependent THII_3351 IPR017804 Methyltransferase EgtD-like THII_3351 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type THII_3351 IPR035094 Histidine N-alpha-methyltransferase THII_3354 IPR033130 Ribonuclease T2, His active site 2 THII_3354 IPR018188 Ribonuclease T2, His active site 1 THII_3354 IPR036430 Ribonuclease T2-like superfamily THII_3354 IPR001568 Ribonuclease T2-like THII_3355 IPR003477 mRNA interferase PemK-like THII_3355 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor THII_3361 IPR036291 NAD(P)-binding domain superfamily THII_3361 IPR005811 ATP-citrate lyase/succinyl-CoA ligase THII_3361 IPR003781 CoA-binding THII_3361 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site THII_3361 IPR016102 Succinyl-CoA synthetase-like THII_3361 IPR005810 Succinyl-CoA ligase, alpha subunit THII_3361 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site THII_3362 IPR011761 ATP-grasp fold THII_3362 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type THII_3362 IPR013815 ATP-grasp fold, subdomain 1 THII_3362 IPR005811 ATP-citrate lyase/succinyl-CoA ligase THII_3362 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site THII_3362 IPR016102 Succinyl-CoA synthetase-like THII_3362 IPR005809 Succinate--CoA synthetase, beta subunit THII_3363 IPR016192 APOBEC/CMP deaminase, zinc-binding THII_3363 IPR028883 tRNA-specific adenosine deaminase THII_3363 IPR002125 Cytidine and deoxycytidylate deaminase domain THII_3363 IPR016193 Cytidine deaminase-like THII_3364 IPR033656 Histidyl-anticodon-binding THII_3364 IPR006195 Aminoacyl-tRNA synthetase, class II THII_3364 IPR004154 Anticodon-binding THII_3364 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit THII_3364 IPR015807 Histidine-tRNA ligase THII_3364 IPR036621 Anticodon-binding domain superfamily THII_3364 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain THII_3365 IPR018704 Tetratricopeptide repeat-like domain THII_3365 IPR011990 Tetratricopeptide-like helical domain superfamily THII_3365 IPR026039 Uncharacterised protein family UPF0070 THII_3366 IPR015943 WD40/YVTN repeat-like-containing domain superfamily THII_3366 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily THII_3366 IPR002372 Pyrrolo-quinoline quinone repeat THII_3366 IPR017687 Outer membrane protein assembly factor BamB THII_3366 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat THII_3371 IPR011707 Multicopper oxidase, type 3 THII_3371 IPR001117 Multicopper oxidase, type 1 THII_3371 IPR011706 Multicopper oxidase, type 2 THII_3371 IPR008972 Cupredoxin THII_3372 IPR003660 HAMP domain THII_3372 IPR036457 PPM-type phosphatase domain superfamily THII_3372 IPR001932 PPM-type phosphatase domain THII_3379 IPR018060 DNA binding HTH domain, AraC-type THII_3379 IPR020449 Transcription regulator HTH, AraC- type THII_3379 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like THII_3379 IPR009057 Homeobox-like domain superfamily THII_3379 IPR037923 Transcription regulator HTH-like THII_3386 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_3386 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_3386 IPR005861 Histidinol-phosphate aminotransferase family THII_3386 IPR004839 Aminotransferase, class I/classII THII_3386 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site THII_3386 IPR015424 Pyridoxal phosphate-dependent transferase THII_3387 IPR036979 Chorismate mutase domain superfamily THII_3387 IPR002701 Chorismate mutase II, prokaryotic-type THII_3387 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain THII_3387 IPR001086 Prephenate dehydratase THII_3387 IPR018528 Prephenate dehydratase, conserved site THII_3387 IPR002912 ACT domain THII_3387 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase THII_3387 IPR036263 Chorismate mutase type II superfamily THII_3388 IPR035996 Tetrapyrrole methylase superfamily THII_3388 IPR014776 Tetrapyrrole methylase, subdomain 2 THII_3388 IPR008189 rRNA small subunit methyltransferase I THII_3388 IPR018063 SAM-dependent methyltransferase RsmI, conserved site THII_3388 IPR000878 Tetrapyrrole methylase THII_3388 IPR014777 Tetrapyrrole methylase, subdomain 1 THII_3389 IPR016193 Cytidine deaminase-like THII_3389 IPR002125 Cytidine and deoxycytidylate deaminase domain THII_3389 IPR016192 APOBEC/CMP deaminase, zinc-binding THII_3391 IPR036291 NAD(P)-binding domain superfamily THII_3391 IPR020904 Short-chain dehydrogenase/reductase, conserved site THII_3391 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3394 IPR029044 Nucleotide-diphospho-sugar transferases THII_3395 IPR042094 Type II secretion system F domain superfamily THII_3395 IPR018076 Type II secretion system F domain THII_3395 IPR003004 GspF/PilC family THII_3395 IPR001992 Type II secretion system conserved site THII_3395 IPR011850 General secretion pathway protein F THII_3396 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_3396 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_3396 IPR015424 Pyridoxal phosphate-dependent transferase THII_3396 IPR004839 Aminotransferase, class I/classII THII_3397 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding THII_3397 IPR019811 Homoserine dehydrogenase, conserved site THII_3397 IPR001342 Homoserine dehydrogenase, catalytic THII_3397 IPR016204 Homoserine dehydrogenase THII_3397 IPR036291 NAD(P)-binding domain superfamily THII_3397 IPR002912 ACT domain THII_3398 IPR012902 Prokaryotic N-terminal methylation site THII_3398 IPR022346 General secretion pathway, GspH THII_3398 IPR002416 Type II secretion system protein H THII_3401 IPR004692 Preprotein translocase SecG subunit THII_3402 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic THII_3402 IPR020861 Triosephosphate isomerase, active site THII_3402 IPR035990 Triosephosphate isomerase superfamily THII_3402 IPR013785 Aldolase-type TIM barrel THII_3402 IPR000652 Triosephosphate isomerase THII_3405 IPR006439 HAD hydrolase, subfamily IA THII_3405 IPR036412 HAD-like superfamily THII_3405 IPR023214 HAD superfamily THII_3405 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THII_3405 IPR010976 Beta-phosphoglucomutase hydrolase THII_3405 IPR041492 Haloacid dehalogenase-like hydrolase THII_3411 IPR017665 Guanylate kinase THII_3411 IPR008144 Guanylate kinase-like domain THII_3411 IPR008145 Guanylate kinase/L-type calcium channel beta subunit THII_3411 IPR020590 Guanylate kinase, conserved site THII_3411 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3412 IPR005229 Conserved hypothetical protein CHP00255 THII_3412 IPR013527 YicC-like, N-terminal THII_3412 IPR013551 Domain of unknown function DUF1732 THII_3413 IPR005467 Histidine kinase domain THII_3413 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3413 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3413 IPR036641 HPT domain superfamily THII_3413 IPR035965 PAS domain superfamily THII_3413 IPR000014 PAS domain THII_3413 IPR000700 PAS-associated, C-terminal THII_3413 IPR040642 Histidine kinase receptor ArcB, transmembrane domain THII_3413 IPR013767 PAS fold THII_3413 IPR001789 Signal transduction response regulator, receiver domain THII_3413 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_3413 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB THII_3413 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3413 IPR003594 Histidine kinase/HSP90-like ATPase THII_3413 IPR011006 CheY-like superfamily THII_3413 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily THII_3413 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3415 IPR003607 HD/PDEase domain THII_3415 IPR001789 Signal transduction response regulator, receiver domain THII_3415 IPR037522 HD-GYP domain THII_3415 IPR011006 CheY-like superfamily THII_3417 IPR001610 PAC motif THII_3417 IPR001633 EAL domain THII_3417 IPR013656 PAS fold-4 THII_3417 IPR035965 PAS domain superfamily THII_3417 IPR000700 PAS-associated, C-terminal THII_3417 IPR000014 PAS domain THII_3417 IPR013655 PAS fold-3 THII_3417 IPR029787 Nucleotide cyclase THII_3417 IPR000160 GGDEF domain THII_3417 IPR035919 EAL domain superfamily THII_3420 IPR003593 AAA+ ATPase domain THII_3420 IPR013525 ABC-2 type transporter THII_3420 IPR017871 ABC transporter, conserved site THII_3420 IPR003439 ABC transporter-like THII_3420 IPR000253 Forkhead-associated (FHA) domain THII_3420 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3420 IPR008984 SMAD/FHA domain superfamily THII_3421 IPR030963 3-dehydroquinate synthase family THII_3421 IPR030960 3-dehydroquinate synthase domain THII_3421 IPR016037 3-dehydroquinate synthase AroB THII_3422 IPR031322 Shikimate kinase/gluconokinase THII_3422 IPR000623 Shikimate kinase/Threonine synthase-like 1 THII_3422 IPR023000 Shikimate kinase, conserved site THII_3422 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3428 IPR012340 Nucleic acid-binding, OB-fold THII_3428 IPR021968 Polyribonucleotide phosphorylase C-terminal THII_3428 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G THII_3428 IPR028878 Ribonuclease E THII_3428 IPR004659 Ribonuclease E/G THII_3428 IPR022967 RNA-binding domain, S1 THII_3428 IPR003029 S1 domain THII_3429 IPR036986 RNA-binding S4 domain superfamily THII_3429 IPR006145 Pseudouridine synthase, RsuA/RluA THII_3429 IPR020103 Pseudouridine synthase, catalytic domain superfamily THII_3429 IPR006225 Pseudouridine synthase, RluC/RluD THII_3429 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site THII_3429 IPR002942 RNA-binding S4 domain THII_3430 IPR023214 HAD superfamily THII_3430 IPR036412 HAD-like superfamily THII_3430 IPR037512 Phosphoglycolate phosphatase, prokaryotic THII_3430 IPR041492 Haloacid dehalogenase-like hydrolase THII_3430 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THII_3430 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic THII_3430 IPR006439 HAD hydrolase, subfamily IA THII_3431 IPR029045 ClpP/crotonase-like domain superfamily THII_3431 IPR023171 Na/H antiporter domain superfamily THII_3431 IPR004670 Na+/H+ antiporter NhaA THII_3431 IPR002142 Peptidase S49 THII_3433 IPR003691 Putative fluoride ion transporter CrcB THII_3434 IPR011322 Nitrogen regulatory PII-like, alpha/beta THII_3434 IPR003793 Domain of unknown function DUF190 THII_3434 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THII_3435 IPR003691 Putative fluoride ion transporter CrcB THII_3436 IPR003793 Domain of unknown function DUF190 THII_3436 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THII_3436 IPR011322 Nitrogen regulatory PII-like, alpha/beta THII_3437 IPR033729 Serine-tRNA ligase catalytic core domain THII_3437 IPR002317 Serine-tRNA ligase, type1 THII_3437 IPR015866 Serine-tRNA synthetase, type1, N-terminal THII_3437 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily THII_3437 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm THII_3437 IPR006195 Aminoacyl-tRNA synthetase, class II THII_3437 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) THII_3443 IPR023753 FAD/NAD(P)-binding domain THII_3443 IPR006258 Dihydrolipoamide dehydrogenase THII_3443 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily THII_3443 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site THII_3443 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3443 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THII_3443 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I THII_3444 IPR004167 Peripheral subunit-binding domain THII_3444 IPR000089 Biotin/lipoyl attachment THII_3444 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily THII_3444 IPR036625 E3-binding domain superfamily THII_3444 IPR006255 Dihydrolipoamide succinyltransferase THII_3444 IPR011053 Single hybrid motif THII_3444 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site THII_3444 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain THII_3445 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal THII_3445 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily THII_3445 IPR005475 Transketolase-like, pyrimidine-binding domain THII_3445 IPR029061 Thiamin diphosphate-binding fold THII_3445 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain THII_3445 IPR011603 2-oxoglutarate dehydrogenase E1 component THII_3445 IPR001017 Dehydrogenase, E1 component THII_3446 IPR001252 Malate dehydrogenase, active site THII_3446 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal THII_3446 IPR001236 Lactate/malate dehydrogenase, N-terminal THII_3446 IPR022383 Lactate/malate dehydrogenase, C-terminal THII_3446 IPR001557 L-lactate/malate dehydrogenase THII_3446 IPR010945 Malate dehydrogenase, type 2 THII_3446 IPR036291 NAD(P)-binding domain superfamily THII_3447 IPR003594 Histidine kinase/HSP90-like ATPase THII_3447 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3447 IPR005467 Histidine kinase domain THII_3447 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3447 IPR001789 Signal transduction response regulator, receiver domain THII_3447 IPR040642 Histidine kinase receptor ArcB, transmembrane domain THII_3447 IPR011006 CheY-like superfamily THII_3447 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB THII_3447 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3447 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_3447 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3447 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily THII_3447 IPR035965 PAS domain superfamily THII_3447 IPR000700 PAS-associated, C-terminal THII_3447 IPR000014 PAS domain THII_3447 IPR036641 HPT domain superfamily THII_3447 IPR013767 PAS fold THII_3448 IPR019247 Histidine kinase BarA, N-terminal THII_3448 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3448 IPR005467 Histidine kinase domain THII_3448 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3448 IPR003594 Histidine kinase/HSP90-like ATPase THII_3448 IPR036641 HPT domain superfamily THII_3448 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3448 IPR011006 CheY-like superfamily THII_3448 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_3448 IPR001789 Signal transduction response regulator, receiver domain THII_3448 IPR003660 HAMP domain THII_3448 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3449 IPR011006 CheY-like superfamily THII_3449 IPR001867 OmpR/PhoB-type DNA-binding domain THII_3449 IPR016032 Signal transduction response regulator, C-terminal effector THII_3449 IPR001789 Signal transduction response regulator, receiver domain THII_3449 IPR039420 Transcriptional regulatory protein WalR-like THII_3449 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3455 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site THII_3455 IPR011079 Alanine racemase, C-terminal THII_3455 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal THII_3455 IPR000821 Alanine racemase THII_3455 IPR029066 PLP-binding barrel THII_3455 IPR001608 Alanine racemase, N-terminal THII_3456 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3456 IPR007693 DNA helicase, DnaB-like, N-terminal THII_3456 IPR007694 DNA helicase, DnaB-like, C-terminal THII_3456 IPR007692 DNA helicase, DnaB type THII_3456 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily THII_3456 IPR006141 Intein N-terminal splicing region THII_3456 IPR004042 Intein DOD homing endonuclease THII_3456 IPR030934 Intein C-terminal splicing region THII_3456 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal THII_3456 IPR006142 Intein THII_3456 IPR003587 Hint domain N-terminal THII_3456 IPR036844 Hint domain superfamily THII_3456 IPR003593 AAA+ ATPase domain THII_3456 IPR027434 Homing endonuclease THII_3456 IPR003586 Hint domain C-terminal THII_3456 IPR004860 Homing endonuclease, LAGLIDADG THII_3457 IPR020070 Ribosomal protein L9, N-terminal THII_3457 IPR020069 Ribosomal protein L9, C-terminal THII_3457 IPR020594 Ribosomal protein L9, bacteria/chloroplast THII_3457 IPR036791 Ribosomal protein L9, C-terminal domain superfamily THII_3457 IPR009027 Ribosomal protein L9/RNase H1, N-terminal THII_3457 IPR000244 Ribosomal protein L9 THII_3457 IPR036935 Ribosomal protein L9, N-terminal domain superfamily THII_3458 IPR036870 Ribosomal protein S18 superfamily THII_3458 IPR018275 Ribosomal protein S18, conserved site THII_3458 IPR001648 Ribosomal protein S18 THII_3459 IPR000529 Ribosomal protein S6 THII_3459 IPR035980 Ribosomal protein S6 superfamily THII_3459 IPR020815 Ribosomal protein S6, conserved site THII_3459 IPR020814 Ribosomal protein S6, plastid/chloroplast THII_3459 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 THII_3461 IPR036390 Winged helix DNA-binding domain superfamily THII_3461 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3461 IPR005234 Chromosome segregation/condensation protein ScpB THII_3462 IPR003768 Segregation and condensation protein A THII_3463 IPR002305 Aminoacyl-tRNA synthetase, class Ic THII_3463 IPR002306 Tryptophan-tRNA ligase THII_3463 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3463 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THII_3464 IPR008915 Peptidase M50 THII_3465 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THII_3465 IPR006070 YrdC-like domain THII_3466 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type THII_3466 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3467 IPR001789 Signal transduction response regulator, receiver domain THII_3467 IPR037522 HD-GYP domain THII_3467 IPR003607 HD/PDEase domain THII_3467 IPR011006 CheY-like superfamily THII_3468 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_3468 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3468 IPR036641 HPT domain superfamily THII_3468 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3468 IPR001789 Signal transduction response regulator, receiver domain THII_3468 IPR005467 Histidine kinase domain THII_3468 IPR011006 CheY-like superfamily THII_3468 IPR003594 Histidine kinase/HSP90-like ATPase THII_3468 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3468 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3468 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_3469 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3469 IPR001789 Signal transduction response regulator, receiver domain THII_3469 IPR005467 Histidine kinase domain THII_3469 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3469 IPR036641 HPT domain superfamily THII_3469 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3469 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3469 IPR003594 Histidine kinase/HSP90-like ATPase THII_3469 IPR011006 CheY-like superfamily THII_3469 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_3470 IPR002510 Metalloprotease TldD/PmbA THII_3470 IPR025502 TldD THII_3470 IPR035068 Metalloprotease TldD/PmbA, N-terminal THII_3470 IPR036059 Metalloprotease TldD/PmbA superfamily THII_3472 IPR001796 Dihydrofolate reductase domain THII_3472 IPR012259 Dihydrofolate reductase THII_3472 IPR024072 Dihydrofolate reductase-like domain superfamily THII_3472 IPR017925 Dihydrofolate reductase conserved site THII_3473 IPR020458 Zinc finger, DksA/TraR C4-type conserved site THII_3473 IPR000962 Zinc finger, DksA/TraR C4-type THII_3473 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria THII_3473 IPR037187 DksA, N-terminal domain superfamily THII_3473 IPR012784 RNA polymerase-binding transcription factor DksA THII_3476 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3476 IPR006342 Methyltransferase FkbM THII_3480 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site THII_3480 IPR015424 Pyridoxal phosphate-dependent transferase THII_3480 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria THII_3480 IPR004839 Aminotransferase, class I/classII THII_3480 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type THII_3480 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_3480 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_3481 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3481 IPR004472 Dethiobiotin synthase BioD THII_3482 IPR036412 HAD-like superfamily THII_3482 IPR006549 HAD-superfamily hydrolase,subfamily IIIA THII_3482 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase THII_3482 IPR023214 HAD superfamily THII_3482 IPR006543 Histidinol-phosphate phosphatase THII_3484 IPR033730 Prokaryote proline-tRNA ligase core domain THII_3484 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type THII_3484 IPR002316 Proline-tRNA ligase, class IIa THII_3484 IPR036621 Anticodon-binding domain superfamily THII_3484 IPR006195 Aminoacyl-tRNA synthetase, class II THII_3484 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) THII_3484 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain THII_3484 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily THII_3484 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 THII_3484 IPR004154 Anticodon-binding THII_3485 IPR001264 Glycosyl transferase, family 51 THII_3485 IPR036950 Penicillin binding protein transglycosylase domain THII_3485 IPR012338 Beta-lactamase/transpeptidase-like THII_3485 IPR009647 Penicillin-binding, C-terminal THII_3485 IPR011815 Penicillin-binding protein 1C THII_3485 IPR023346 Lysozyme-like domain superfamily THII_3485 IPR001460 Penicillin-binding protein, transpeptidase THII_3487 IPR001296 Glycosyl transferase, family 1 THII_3487 IPR013534 Starch synthase, catalytic domain THII_3487 IPR011835 Bacterial/plant glycogen synthase THII_3489 IPR002201 Glycosyl transferase, family 9 THII_3489 IPR011916 Lipopolysaccharide heptosyltransferase III, putative THII_3491 IPR001296 Glycosyl transferase, family 1 THII_3491 IPR011835 Bacterial/plant glycogen synthase THII_3491 IPR013534 Starch synthase, catalytic domain THII_3498 IPR004167 Peripheral subunit-binding domain THII_3498 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain THII_3498 IPR011053 Single hybrid motif THII_3498 IPR036625 E3-binding domain superfamily THII_3498 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily THII_3498 IPR000089 Biotin/lipoyl attachment THII_3498 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex THII_3498 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site THII_3499 IPR005474 Transketolase, N-terminal THII_3499 IPR029061 Thiamin diphosphate-binding fold THII_3499 IPR004660 Pyruvate dehydrogenase E1 component THII_3499 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal THII_3499 IPR041621 Pyruvate dehydrogenase E1 component, middle domain THII_3499 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THII_3509 IPR007454 Uncharacterised protein family UPF0250 THII_3509 IPR027471 YbeD-like domain superfamily THII_3510 IPR001544 Aminotransferase class IV THII_3510 IPR018300 Aminotransferase, class IV, conserved site THII_3510 IPR036038 Aminotransferase-like, PLP-dependent enzymes THII_3510 IPR005784 D-amino acid aminotransferase THII_3511 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A THII_3511 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily THII_3511 IPR015956 Penicillin-binding protein, C-terminal domain superfamily THII_3511 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal THII_3511 IPR012338 Beta-lactamase/transpeptidase-like THII_3511 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal THII_3512 IPR012997 Rare lipoprotein A THII_3512 IPR009009 RlpA-like protein, double-psi beta-barrel domain THII_3512 IPR034718 Endolytic peptidoglycan transglycosylase RlpA THII_3512 IPR007730 Sporulation-like domain THII_3512 IPR036908 RlpA-like domain superfamily THII_3512 IPR036680 Sporulation-like domain superfamily THII_3513 IPR023346 Lysozyme-like domain superfamily THII_3513 IPR011757 Lytic transglycosylase MltB THII_3513 IPR031304 Transglycosylase SLT domain 2 THII_3514 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB THII_3514 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA THII_3514 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site THII_3515 IPR005311 Penicillin-binding protein, dimerisation domain THII_3515 IPR012338 Beta-lactamase/transpeptidase-like THII_3515 IPR017790 Penicillin-binding protein 2 THII_3515 IPR036138 Penicillin-binding protein, dimerisation domain superfamily THII_3515 IPR001460 Penicillin-binding protein, transpeptidase THII_3516 IPR007227 Cell shape-determining protein MreD THII_3516 IPR026034 Cell shape-determining protein MreD, proteobacterial type THII_3517 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 THII_3517 IPR007221 Rod shape-determining protein MreC THII_3517 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 THII_3518 IPR004753 Cell shape determining protein MreB THII_3519 IPR003837 Glu-tRNAGln amidotransferase C subunit THII_3519 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C THII_3520 IPR036928 Amidase signature (AS) superfamily THII_3520 IPR000120 Amidase THII_3520 IPR020556 Amidase, conserved site THII_3520 IPR023631 Amidase signature domain THII_3520 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit THII_3521 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 THII_3521 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 THII_3521 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like THII_3521 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site THII_3521 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain THII_3521 IPR018027 Asn/Gln amidotransferase THII_3521 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic THII_3521 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E THII_3521 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit THII_3527 IPR033704 dUTPase, trimeric THII_3527 IPR036157 dUTPase-like superfamily THII_3527 IPR029054 dUTPase-like THII_3527 IPR011962 dCTP deaminase THII_3528 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 THII_3528 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3528 IPR000808 Mrp, conserved site THII_3528 IPR019591 Mrp/NBP35 ATP-binding protein THII_3528 IPR034904 Fe-S cluster assembly domain superfamily THII_3529 IPR000644 CBS domain THII_3530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3530 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THII_3530 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily THII_3530 IPR003356 DNA methylase, adenine-specific THII_3532 IPR002491 ABC transporter periplasmic binding domain THII_3537 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative THII_3541 IPR004769 Adenylosuccinate lyase THII_3541 IPR000362 Fumarate lyase family THII_3541 IPR013539 Adenylosuccinate lyase PurB, C-terminal THII_3541 IPR022761 Fumarate lyase, N-terminal THII_3541 IPR008948 L-Aspartase-like THII_3541 IPR024083 Fumarase/histidase, N-terminal THII_3541 IPR020557 Fumarate lyase, conserved site THII_3542 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase THII_3543 IPR019812 Hydrogenase assembly chaperone, conserved site THII_3543 IPR001109 Hydrogenase expression/formation protein, HupF/HypC THII_3543 IPR037254 HupF/HypC superfamily THII_3544 IPR000688 Hydrogenase maturation factor HypA/HybF THII_3546 IPR001940 Peptidase S1C THII_3546 IPR009003 Peptidase S1, PA clan THII_3546 IPR001478 PDZ domain THII_3546 IPR011782 Peptidase S1C, Do THII_3546 IPR036034 PDZ superfamily THII_3547 IPR033749 Polyprenyl synthetase, conserved site THII_3547 IPR000092 Polyprenyl synthetase THII_3547 IPR008949 Isoprenoid synthase domain superfamily THII_3552 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain THII_3552 IPR030389 FeoB-type guanine nucleotide-binding (G) domain THII_3552 IPR041069 FeoB, cytosolic helical domain THII_3552 IPR011640 Ferrous iron transport protein B, C-terminal THII_3552 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3552 IPR003373 Ferrous iron transport protein B THII_3562 IPR000891 Pyruvate carboxyltransferase THII_3562 IPR013477 Homocitrate synthase NifV-like THII_3562 IPR013785 Aldolase-type TIM barrel THII_3562 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site THII_3566 IPR000412 ABC-2 transporter THII_3566 IPR013525 ABC-2 type transporter THII_3567 IPR017871 ABC transporter, conserved site THII_3567 IPR003439 ABC transporter-like THII_3567 IPR003593 AAA+ ATPase domain THII_3567 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3570 IPR003399 Mce/MlaD THII_3570 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD THII_3571 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3571 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase THII_3571 IPR041664 Orc1-like, AAA ATPase domain THII_3571 IPR029787 Nucleotide cyclase THII_3571 IPR011990 Tetratricopeptide-like helical domain superfamily THII_3572 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site THII_3572 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic THII_3572 IPR024084 Isopropylmalate dehydrogenase-like domain THII_3575 IPR001238 DNA-binding, RecF THII_3575 IPR042174 DNA-binding RecF, domain 2 THII_3575 IPR003395 RecF/RecN/SMC, N-terminal THII_3575 IPR018078 DNA-binding, RecF, conserved site THII_3575 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3577 IPR006426 Asparagine synthase, glutamine-hydrolyzing THII_3577 IPR001962 Asparagine synthase THII_3577 IPR033738 Asparagine synthase, N-terminal domain THII_3577 IPR029055 Nucleophile aminohydrolases, N-terminal THII_3577 IPR017932 Glutamine amidotransferase type 2 domain THII_3580 IPR030470 UbiA prenyltransferase conserved site THII_3580 IPR006370 4-hydroxybenzoate polyprenyltransferase-like THII_3580 IPR039653 Prenyltransferase THII_3580 IPR000537 UbiA prenyltransferase family THII_3581 IPR001254 Serine proteases, trypsin domain THII_3581 IPR018114 Serine proteases, trypsin family, histidine active site THII_3581 IPR033116 Serine proteases, trypsin family, serine active site THII_3581 IPR001314 Peptidase S1A, chymotrypsin family THII_3581 IPR009003 Peptidase S1, PA clan THII_3582 IPR003770 Endolytic murein transglycosylase THII_3583 IPR014031 Beta-ketoacyl synthase, C-terminal THII_3583 IPR018201 Beta-ketoacyl synthase, active site THII_3583 IPR000794 Beta-ketoacyl synthase THII_3583 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 THII_3583 IPR016039 Thiolase-like THII_3583 IPR014030 Beta-ketoacyl synthase, N-terminal THII_3583 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_3584 IPR009081 Phosphopantetheine binding ACP domain THII_3584 IPR003231 Acyl carrier protein (ACP) THII_3584 IPR036736 ACP-like superfamily THII_3584 IPR006162 Phosphopantetheine attachment site THII_3585 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase THII_3585 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3585 IPR020904 Short-chain dehydrogenase/reductase, conserved site THII_3585 IPR036291 NAD(P)-binding domain superfamily THII_3586 IPR024925 Malonyl CoA-acyl carrier protein transacylase THII_3586 IPR001227 Acyl transferase domain superfamily THII_3586 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding THII_3586 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_3586 IPR014043 Acyl transferase THII_3586 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type THII_3587 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 THII_3587 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III THII_3587 IPR016039 Thiolase-like THII_3587 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal THII_3588 IPR012281 Phospholipid biosynthesis protein, PlsX-like THII_3588 IPR003664 Fatty acid synthesis PlsX protein THII_3589 IPR002677 Ribosomal protein L32p THII_3589 IPR011332 Zinc-binding ribosomal protein THII_3590 IPR003772 Large ribosomal RNA subunit accumulation protein YceD THII_3590 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria THII_3591 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein THII_3591 IPR029001 Inosine triphosphate pyrophosphatase-like THII_3592 IPR000671 Peptidase A31 family THII_3592 IPR023430 Peptidase HybD-like domain superfamily THII_3592 IPR004419 Peptidase A31, hydrogenase expression/formation protein THII_3595 IPR017969 Heavy-metal-associated, conserved site THII_3595 IPR018303 P-type ATPase, phosphorylation site THII_3595 IPR036412 HAD-like superfamily THII_3595 IPR008250 P-type ATPase, A domain superfamily THII_3595 IPR023298 P-type ATPase, transmembrane domain superfamily THII_3595 IPR006121 Heavy metal-associated domain, HMA THII_3595 IPR023299 P-type ATPase, cytoplasmic domain N THII_3595 IPR036163 Heavy metal-associated domain superfamily THII_3595 IPR023214 HAD superfamily THII_3595 IPR001757 P-type ATPase THII_3595 IPR027256 P-type ATPase, subfamily IB THII_3596 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site THII_3596 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding THII_3596 IPR015815 3-hydroxyisobutyrate dehydrogenase-related THII_3596 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain THII_3596 IPR006398 2-hydroxy-3-oxopropionate reductase THII_3596 IPR013328 6-phosphogluconate dehydrogenase, domain 2 THII_3596 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THII_3596 IPR036291 NAD(P)-binding domain superfamily THII_3597 IPR005753 DNA helicase, ATP-dependent, UvrD type THII_3597 IPR014017 UvrD-like DNA helicase, C-terminal THII_3597 IPR014016 UvrD-like helicase, ATP-binding domain THII_3597 IPR013986 DExx box DNA helicase domain superfamily THII_3597 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3597 IPR034739 UvrD/AddA helicase, N-terminal THII_3597 IPR000212 DNA helicase, UvrD/REP type THII_3598 IPR004758 Amino acid transporter THII_3598 IPR002293 Amino acid/polyamine transporter I THII_3601 IPR029058 Alpha/Beta hydrolase fold THII_3603 IPR006531 Gp5 N-terminal THII_3603 IPR037026 Vgr protein, OB-fold domain superfamily THII_3603 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset THII_3603 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein THII_3610 IPR006390 Dihydropteroate synthase THII_3610 IPR011005 Dihydropteroate synthase-like THII_3610 IPR000489 Pterin-binding domain THII_3612 IPR003593 AAA+ ATPase domain THII_3612 IPR005936 Peptidase, FtsH THII_3612 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3612 IPR037219 Peptidase M41-like THII_3612 IPR000642 Peptidase M41 THII_3612 IPR011546 Peptidase M41, FtsH extracellular THII_3612 IPR003960 ATPase, AAA-type, conserved site THII_3612 IPR003959 ATPase, AAA-type, core THII_3612 IPR041569 AAA ATPase, AAA+ lid domain THII_3613 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3613 IPR002877 Ribosomal RNA methyltransferase FtsJ domain THII_3613 IPR015507 Ribosomal RNA large subunit methyltransferase E THII_3614 IPR029151 Periplasmic sensor-like domain superfamily THII_3614 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3614 IPR001789 Signal transduction response regulator, receiver domain THII_3614 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3614 IPR011006 CheY-like superfamily THII_3614 IPR003594 Histidine kinase/HSP90-like ATPase THII_3614 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3614 IPR005467 Histidine kinase domain THII_3614 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3614 IPR015387 LuxQ, periplasmic THII_3614 IPR035965 PAS domain superfamily THII_3615 IPR002934 Polymerase, nucleotidyl transferase domain THII_3615 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase THII_3615 IPR006674 HD domain THII_3615 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme THII_3615 IPR003607 HD/PDEase domain THII_3615 IPR002912 ACT domain THII_3616 IPR010138 UDP-2,3-diacylglucosamine hydrolase THII_3616 IPR029052 Metallo-dependent phosphatase-like THII_3616 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type THII_3617 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site THII_3617 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain THII_3617 IPR029000 Cyclophilin-like domain superfamily THII_3618 IPR013149 Alcohol dehydrogenase, C-terminal THII_3618 IPR011032 GroES-like superfamily THII_3618 IPR036291 NAD(P)-binding domain superfamily THII_3618 IPR013154 Alcohol dehydrogenase, N-terminal THII_3621 IPR004090 Chemotaxis methyl-accepting receptor THII_3621 IPR003660 HAMP domain THII_3621 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_3622 IPR029787 Nucleotide cyclase THII_3622 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase THII_3623 IPR013785 Aldolase-type TIM barrel THII_3623 IPR013798 Indole-3-glycerol phosphate synthase THII_3623 IPR011060 Ribulose-phosphate binding barrel THII_3623 IPR001468 Indole-3-glycerol phosphate synthase, conserved site THII_3624 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily THII_3624 IPR000312 Glycosyl transferase, family 3 THII_3624 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily THII_3624 IPR017459 Glycosyl transferase family 3, N-terminal domain THII_3624 IPR005940 Anthranilate phosphoribosyl transferase THII_3625 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily THII_3625 IPR006037 Regulator of K+ conductance, C-terminal THII_3625 IPR031312 Sodium/sulphate symporter, conserved site THII_3625 IPR004680 Citrate transporter-like domain THII_3628 IPR001247 Exoribonuclease, phosphorolytic domain 1 THII_3628 IPR015847 Exoribonuclease, phosphorolytic domain 2 THII_3628 IPR036345 Exoribonuclease, PH domain 2 superfamily THII_3628 IPR027408 PNPase/RNase PH domain superfamily THII_3628 IPR020568 Ribosomal protein S5 domain 2-type fold THII_3628 IPR002381 Ribonuclease PH, bacterial-type THII_3628 IPR018336 Ribonuclease PH, conserved site THII_3629 IPR001305 Heat shock protein DnaJ, cysteine-rich domain THII_3629 IPR018253 DnaJ domain, conserved site THII_3629 IPR012724 Chaperone DnaJ THII_3629 IPR001623 DnaJ domain THII_3629 IPR002939 Chaperone DnaJ, C-terminal THII_3629 IPR036869 Chaperone J-domain superfamily THII_3629 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily THII_3629 IPR008971 HSP40/DnaJ peptide-binding THII_3630 IPR020809 Enolase, conserved site THII_3630 IPR020810 Enolase, C-terminal TIM barrel domain THII_3630 IPR029017 Enolase-like, N-terminal THII_3630 IPR036849 Enolase-like, C-terminal domain superfamily THII_3630 IPR000941 Enolase THII_3630 IPR020811 Enolase, N-terminal THII_3631 IPR006269 3-deoxy-8-phosphooctulonate synthase THII_3631 IPR006218 DAHP synthetase I/KDSA THII_3631 IPR013785 Aldolase-type TIM barrel THII_3633 IPR006286 Deglycase PfpI THII_3633 IPR029062 Class I glutamine amidotransferase-like THII_3633 IPR002818 DJ-1/PfpI THII_3634 IPR035466 GlmS/AgaS, SIS domain 1 THII_3634 IPR035490 GlmS/FrlB, SIS domain 2 THII_3634 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising THII_3634 IPR029055 Nucleophile aminohydrolases, N-terminal THII_3634 IPR017932 Glutamine amidotransferase type 2 domain THII_3634 IPR001347 Sugar isomerase (SIS) THII_3639 IPR013783 Immunoglobulin-like fold THII_3639 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal THII_3639 IPR023704 Glucan biosynthesis protein G THII_3639 IPR014438 Glucan biosynthesis protein MdoG/MdoD THII_3639 IPR014756 Immunoglobulin E-set THII_3639 IPR011013 Galactose mutarotase-like domain superfamily THII_3639 IPR014718 Glycoside hydrolase-type carbohydrate-binding THII_3642 IPR007484 Peptidase M28 THII_3648 IPR029151 Periplasmic sensor-like domain superfamily THII_3648 IPR015387 LuxQ, periplasmic THII_3648 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3648 IPR035965 PAS domain superfamily THII_3648 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3648 IPR005467 Histidine kinase domain THII_3648 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3648 IPR003594 Histidine kinase/HSP90-like ATPase THII_3648 IPR011006 CheY-like superfamily THII_3648 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3648 IPR001789 Signal transduction response regulator, receiver domain THII_3654 IPR007197 Radical SAM THII_3654 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site THII_3654 IPR013785 Aldolase-type TIM barrel THII_3654 IPR023885 4Fe4S-binding SPASM domain THII_3654 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria THII_3654 IPR017200 Coenzyme PQQ synthesis protein E THII_3656 IPR006016 UspA THII_3656 IPR006015 Universal stress protein A family THII_3656 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3658 IPR022919 Peptidase M48, protease HtpX, putative THII_3658 IPR001915 Peptidase M48 THII_3659 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_3659 IPR022894 Oligoribonuclease THII_3659 IPR012337 Ribonuclease H-like superfamily THII_3659 IPR036397 Ribonuclease H superfamily THII_3660 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr THII_3660 IPR029056 Ribokinase-like THII_3660 IPR004443 YjeF N-terminal domain THII_3660 IPR036652 YjeF N-terminal domain superfamily THII_3660 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase THII_3661 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3661 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE THII_3662 IPR036291 NAD(P)-binding domain superfamily THII_3662 IPR001509 NAD-dependent epimerase/dehydratase THII_3665 IPR011055 Duplicated hybrid motif THII_3665 IPR016047 Peptidase M23 THII_3665 IPR010090 Phage tail tape measure protein THII_3665 IPR008258 Transglycosylase SLT domain 1 THII_3665 IPR023346 Lysozyme-like domain superfamily THII_3665 IPR000189 Prokaryotic transglycosylase, active site THII_3671 IPR002559 Transposase, IS4-like THII_3672 IPR025161 Putative transposase IS4/IS5 family THII_3675 IPR042244 HypD, domain 1 THII_3675 IPR002780 Hydrogenase formation HypD protein THII_3675 IPR042243 HypD, domain 2 THII_3677 IPR002549 Transmembrane protein TqsA-like THII_3682 IPR001789 Signal transduction response regulator, receiver domain THII_3682 IPR003594 Histidine kinase/HSP90-like ATPase THII_3682 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3682 IPR036641 HPT domain superfamily THII_3682 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_3682 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3682 IPR011006 CheY-like superfamily THII_3682 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3682 IPR003660 HAMP domain THII_3682 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3682 IPR005467 Histidine kinase domain THII_3682 IPR019247 Histidine kinase BarA, N-terminal THII_3690 IPR009051 Alpha-helical ferredoxin THII_3690 IPR023753 FAD/NAD(P)-binding domain THII_3690 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3690 IPR028261 Dihydroprymidine dehydrogenase domain II THII_3692 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding THII_3692 IPR029061 Thiamin diphosphate-binding fold THII_3693 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THII_3693 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II THII_3693 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal THII_3693 IPR029061 Thiamin diphosphate-binding fold THII_3700 IPR015890 Chorismate-utilising enzyme, C-terminal THII_3700 IPR005256 Anthranilate synthase component I, PabB-like THII_3700 IPR006805 Anthranilate synthase component I, N-terminal THII_3700 IPR019999 Anthranilate synthase component I-like THII_3700 IPR005801 ADC synthase THII_3701 IPR036412 HAD-like superfamily THII_3701 IPR006439 HAD hydrolase, subfamily IA THII_3701 IPR041492 Haloacid dehalogenase-like hydrolase THII_3701 IPR023214 HAD superfamily THII_3701 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THII_3701 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic THII_3701 IPR037512 Phosphoglycolate phosphatase, prokaryotic THII_3702 IPR011060 Ribulose-phosphate binding barrel THII_3702 IPR000056 Ribulose-phosphate 3-epimerase-like THII_3702 IPR013785 Aldolase-type TIM barrel THII_3702 IPR026019 Ribulose-phosphate 3-epimerase THII_3705 IPR007921 CHAP domain THII_3705 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain THII_3705 IPR016185 Pre-ATP-grasp domain superfamily THII_3705 IPR038765 Papain-like cysteine peptidase superfamily THII_3706 IPR035979 RNA-binding domain superfamily THII_3706 IPR000504 RNA recognition motif domain THII_3706 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily THII_3708 IPR007197 Radical SAM THII_3708 IPR004559 Heme chaperone HemW-like THII_3708 IPR034505 Anaerobic coproporphyrinogen-III oxidase THII_3708 IPR006638 Elp3/MiaB/NifB THII_3708 IPR023404 Radical SAM, alpha/beta horseshoe THII_3708 IPR010723 HemN, C-terminal THII_3712 IPR022371 Exopolyphosphatase THII_3712 IPR003695 Ppx/GppA phosphatase THII_3712 IPR030673 Pyrophosphatase, GppA/Ppx-type THII_3715 IPR001015 Ferrochelatase THII_3715 IPR019772 Ferrochelatase, active site THII_3715 IPR033659 Ferrochelatase, N-terminal THII_3715 IPR033644 Ferrochelatase, C-terminal THII_3716 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal THII_3716 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site THII_3716 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal THII_3716 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site THII_3716 IPR000183 Ornithine/DAP/Arg decarboxylase THII_3716 IPR029066 PLP-binding barrel THII_3716 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal THII_3716 IPR002986 Diaminopimelate decarboxylase, LysA THII_3719 IPR003696 Carbamoyltransferase THII_3719 IPR038152 Carbamoyltransferase, C-terminal domain superfamily THII_3719 IPR031730 Carbamoyltransferase, C-terminal THII_3722 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_3722 IPR011006 CheY-like superfamily THII_3722 IPR003660 HAMP domain THII_3722 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3722 IPR033414 Periplasmic sensor domain THII_3722 IPR036641 HPT domain superfamily THII_3722 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3722 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3722 IPR003594 Histidine kinase/HSP90-like ATPase THII_3722 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3722 IPR001789 Signal transduction response regulator, receiver domain THII_3722 IPR005467 Histidine kinase domain THII_3724 IPR001295 Dihydroorotate dehydrogenase, conserved site THII_3724 IPR005719 Dihydroorotate dehydrogenase, class 2 THII_3724 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 THII_3724 IPR005720 Dihydroorotate dehydrogenase domain THII_3724 IPR013785 Aldolase-type TIM barrel THII_3725 IPR023323 Tex-like domain superfamily THII_3725 IPR041692 HHH domain 9 THII_3725 IPR012340 Nucleic acid-binding, OB-fold THII_3725 IPR012337 Ribonuclease H-like superfamily THII_3725 IPR010994 RuvA domain 2-like THII_3725 IPR022967 RNA-binding domain, S1 THII_3725 IPR003029 S1 domain THII_3725 IPR023319 Tex-like protein, HTH domain superfamily THII_3725 IPR018974 Tex-like protein, N-terminal THII_3725 IPR032639 Tex protein, YqgF-like domain THII_3725 IPR037027 YqgF/RNase H-like domain superfamily THII_3725 IPR006641 YqgF/RNase H-like domain THII_3726 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site THII_3726 IPR001091 Restriction/modification DNA-methylase THII_3726 IPR002941 DNA methylase N-4/N-6 THII_3726 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3728 IPR029055 Nucleophile aminohydrolases, N-terminal THII_3728 IPR006982 Glutamate synthase, central-N THII_3728 IPR002932 Glutamate synthase domain THII_3728 IPR017932 Glutamine amidotransferase type 2 domain THII_3728 IPR002489 Glutamate synthase, alpha subunit, C-terminal THII_3728 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily THII_3728 IPR013785 Aldolase-type TIM barrel THII_3733 IPR007711 Toxin HigB-1 THII_3733 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_3734 IPR001789 Signal transduction response regulator, receiver domain THII_3734 IPR035965 PAS domain superfamily THII_3734 IPR015387 LuxQ, periplasmic THII_3734 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3734 IPR005467 Histidine kinase domain THII_3734 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3734 IPR003594 Histidine kinase/HSP90-like ATPase THII_3734 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3734 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3734 IPR011006 CheY-like superfamily THII_3734 IPR029151 Periplasmic sensor-like domain superfamily THII_3736 IPR013078 Histidine phosphatase superfamily, clade-1 THII_3736 IPR029033 Histidine phosphatase superfamily THII_3736 IPR023086 Phosphoglycerate mutase, GpmB, probable THII_3736 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site THII_3737 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3737 IPR029062 Class I glutamine amidotransferase-like THII_3737 IPR017926 Glutamine amidotransferase THII_3737 IPR001674 GMP synthase, C-terminal THII_3737 IPR004739 GMP synthase, glutamine amidotransferase THII_3737 IPR022955 GMP synthase THII_3737 IPR025777 GMP synthetase ATP pyrophosphatase domain THII_3737 IPR022310 NAD/GMP synthase THII_3738 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type THII_3738 IPR014282 Nitrogen fixation protein NifM THII_3738 IPR027304 Trigger factor/SurA domain superfamily THII_3738 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site THII_3739 IPR006311 Twin-arginine translocation pathway, signal sequence THII_3739 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily THII_3739 IPR000572 Oxidoreductase, molybdopterin-binding domain THII_3739 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP THII_3740 IPR013130 Ferric reductase transmembrane component-like domain THII_3740 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ THII_3741 IPR008278 4'-phosphopantetheinyl transferase domain THII_3741 IPR037143 4'-phosphopantetheinyl transferase domain superfamily THII_3741 IPR004568 Phosphopantetheine-protein transferase domain THII_3743 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily THII_3743 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase THII_3743 IPR039793 Uroporphyrinogen-III synthase THII_3744 IPR041102 UvrA, interaction domain THII_3744 IPR041552 UvrA DNA-binding domain THII_3744 IPR004602 UvrABC system subunit A THII_3744 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3744 IPR017871 ABC transporter, conserved site THII_3744 IPR003439 ABC transporter-like THII_3745 IPR005944 Proline iminopeptidase THII_3745 IPR002410 Peptidase S33 THII_3745 IPR029058 Alpha/Beta hydrolase fold THII_3745 IPR000073 Alpha/beta hydrolase fold-1 THII_3756 IPR038717 Tc1-like transposase, DDE domain THII_3761 IPR001943 UVR domain THII_3761 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3761 IPR001650 Helicase, C-terminal THII_3761 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_3761 IPR006935 Helicase/UvrB, N-terminal THII_3761 IPR041471 UvrB, interaction domain THII_3761 IPR036876 UVR domain superfamily THII_3761 IPR004807 UvrABC system, subunit B THII_3761 IPR024759 UvrB, YAD/RRR-motif-containing domain THII_3762 IPR015424 Pyridoxal phosphate-dependent transferase THII_3762 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THII_3762 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THII_3762 IPR004839 Aminotransferase, class I/classII THII_3762 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site THII_3765 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG THII_3765 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related THII_3765 IPR020595 MnmG-related, conserved site THII_3765 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3765 IPR026904 GidA associated domain 3 THII_3766 IPR030374 Polyamine biosynthesis domain THII_3766 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3766 IPR001045 Spermidine/spermine synthases THII_3766 IPR037163 Spermidine synthase, tetramerisation domain superfamily THII_3766 IPR035246 Spermidine synthase, tetramerisation domain THII_3767 IPR036895 Uracil-DNA glycosylase-like domain superfamily THII_3767 IPR005122 Uracil-DNA glycosylase-like THII_3768 IPR035919 EAL domain superfamily THII_3768 IPR000160 GGDEF domain THII_3768 IPR005330 MHYT domain THII_3768 IPR029787 Nucleotide cyclase THII_3768 IPR001633 EAL domain THII_3773 IPR002933 Peptidase M20 THII_3773 IPR011650 Peptidase M20, dimerisation domain THII_3773 IPR001160 Peptidase M20C, Xaa-His dipeptidase THII_3775 IPR018338 Carbonic anhydrase, alpha-class, conserved site THII_3775 IPR041891 Carbonic anhydrase, prokaryotic-like THII_3775 IPR023561 Carbonic anhydrase, alpha-class THII_3775 IPR001148 Alpha carbonic anhydrase domain THII_3775 IPR036398 Alpha carbonic anhydrase domain superfamily THII_3778 IPR023828 Peptidase S8, subtilisin, Ser-active site THII_3778 IPR015500 Peptidase S8, subtilisin-related THII_3778 IPR023827 Peptidase S8, subtilisin, Asp-active site THII_3778 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily THII_3778 IPR036852 Peptidase S8/S53 domain superfamily THII_3778 IPR000209 Peptidase S8/S53 domain THII_3778 IPR034202 Subtilisin Carlsberg-like catalytic domain THII_3778 IPR022398 Peptidase S8, subtilisin, His-active site THII_3778 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 THII_3779 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site THII_3779 IPR013078 Histidine phosphatase superfamily, clade-1 THII_3779 IPR029033 Histidine phosphatase superfamily THII_3779 IPR005952 Phosphoglycerate mutase 1 THII_3780 IPR011055 Duplicated hybrid motif THII_3780 IPR016047 Peptidase M23 THII_3781 IPR029045 ClpP/crotonase-like domain superfamily THII_3781 IPR001478 PDZ domain THII_3781 IPR004447 C-terminal-processing peptidase S41A THII_3781 IPR036034 PDZ superfamily THII_3781 IPR005151 Tail specific protease THII_3782 IPR006287 Protein/nucleic acid deglycase DJ-1 THII_3782 IPR029062 Class I glutamine amidotransferase-like THII_3782 IPR002818 DJ-1/PfpI THII_3783 IPR010953 Citrate synthase, type I THII_3783 IPR036969 Citrate synthase superfamily THII_3783 IPR024176 Citrate synthase, bacterial-type THII_3783 IPR019810 Citrate synthase active site THII_3783 IPR016143 Citrate synthase-like, small alpha subdomain THII_3783 IPR016142 Citrate synthase-like, large alpha subdomain THII_3783 IPR002020 Citrate synthase THII_3784 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative THII_3790 IPR008271 Serine/threonine-protein kinase, active site THII_3790 IPR000719 Protein kinase domain THII_3790 IPR005543 PASTA domain THII_3790 IPR011009 Protein kinase-like domain superfamily THII_3790 IPR017441 Protein kinase, ATP binding site THII_3792 IPR001789 Signal transduction response regulator, receiver domain THII_3792 IPR037522 HD-GYP domain THII_3792 IPR003607 HD/PDEase domain THII_3792 IPR021800 Domain of unknown function DUF3369 THII_3792 IPR011006 CheY-like superfamily THII_3793 IPR016132 Phytochrome chromophore attachment domain THII_3793 IPR029787 Nucleotide cyclase THII_3793 IPR035919 EAL domain superfamily THII_3793 IPR001633 EAL domain THII_3793 IPR013515 Phytochrome, central region THII_3793 IPR000160 GGDEF domain THII_3793 IPR003018 GAF domain THII_3793 IPR029016 GAF-like domain superfamily THII_3793 IPR001294 Phytochrome THII_3798 IPR023753 FAD/NAD(P)-binding domain THII_3798 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3798 IPR039651 Protein FixC-like THII_3799 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3799 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site THII_3799 IPR029035 DHS-like NAD/FAD-binding domain superfamily THII_3799 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal THII_3799 IPR001308 Electron transfer flavoprotein alpha subunit/FixB THII_3799 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal THII_3799 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal THII_3800 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site THII_3800 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal THII_3800 IPR012255 Electron transfer flavoprotein, beta subunit THII_3800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3800 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal THII_3801 IPR042174 DNA-binding RecF, domain 2 THII_3801 IPR003395 RecF/RecN/SMC, N-terminal THII_3801 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3801 IPR018078 DNA-binding, RecF, conserved site THII_3801 IPR001238 DNA-binding, RecF THII_3802 IPR007569 Protein of unknown function DUF559 THII_3802 IPR011335 Restriction endonuclease type II-like THII_3806 IPR006153 Cation/H+ exchanger THII_3807 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily THII_3807 IPR001533 Pterin 4 alpha carbinolamine dehydratase THII_3809 IPR011698 CobB/CobQ-like glutamine amidotransferase THII_3809 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA THII_3809 IPR029062 Class I glutamine amidotransferase-like THII_3809 IPR017929 CobB/CobQ glutamine amidotransferase THII_3809 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3809 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain THII_3810 IPR036737 OmpA-like domain superfamily THII_3810 IPR006665 OmpA-like domain THII_3810 IPR006664 Outer membrane protein, bacterial THII_3816 IPR038377 Sodium/glucose symporter superfamily THII_3816 IPR001734 Sodium/solute symporter THII_3816 IPR014083 Cation/acetate symporter ActP THII_3816 IPR018212 Sodium/solute symporter, conserved site THII_3817 IPR007436 Protein of unknown function DUF485 THII_3819 IPR001509 NAD-dependent epimerase/dehydratase THII_3819 IPR036291 NAD(P)-binding domain superfamily THII_3821 IPR015927 Peptidase S24/S26A/S26B/S26C THII_3821 IPR036286 LexA/Signal peptidase-like superfamily THII_3821 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THII_3821 IPR001387 Cro/C1-type helix-turn-helix domain THII_3821 IPR039418 LexA-like THII_3822 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site THII_3822 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 THII_3822 IPR036291 NAD(P)-binding domain superfamily THII_3822 IPR000534 Semialdehyde dehydrogenase, NAD-binding THII_3822 IPR012280 Semialdehyde dehydrogenase, dimerisation domain THII_3825 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3825 IPR011006 CheY-like superfamily THII_3825 IPR003594 Histidine kinase/HSP90-like ATPase THII_3825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3825 IPR001789 Signal transduction response regulator, receiver domain THII_3825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3825 IPR013656 PAS fold-4 THII_3825 IPR035965 PAS domain superfamily THII_3825 IPR000014 PAS domain THII_3825 IPR005467 Histidine kinase domain THII_3825 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3826 IPR007313 FxsA cytoplasmic membrane protein THII_3827 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THII_3827 IPR011322 Nitrogen regulatory PII-like, alpha/beta THII_3827 IPR004323 Divalent ion tolerance protein, CutA THII_3828 IPR013766 Thioredoxin domain THII_3828 IPR017937 Thioredoxin, conserved site THII_3828 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain THII_3828 IPR035671 DsbD gamma THII_3828 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily THII_3828 IPR003834 Cytochrome C biogenesis protein, transmembrane domain THII_3828 IPR036249 Thioredoxin-like superfamily THII_3828 IPR022910 Thiol:disulphide interchange protein DsbD THII_3829 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant THII_3829 IPR036249 Thioredoxin-like superfamily THII_3829 IPR013766 Thioredoxin domain THII_3833 IPR011006 CheY-like superfamily THII_3833 IPR037522 HD-GYP domain THII_3833 IPR003607 HD/PDEase domain THII_3833 IPR001789 Signal transduction response regulator, receiver domain THII_3834 IPR011006 CheY-like superfamily THII_3834 IPR005467 Histidine kinase domain THII_3834 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3834 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3834 IPR036641 HPT domain superfamily THII_3834 IPR000014 PAS domain THII_3834 IPR003594 Histidine kinase/HSP90-like ATPase THII_3834 IPR035965 PAS domain superfamily THII_3834 IPR013767 PAS fold THII_3834 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3834 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_3834 IPR001789 Signal transduction response regulator, receiver domain THII_3834 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3834 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_3834 IPR000700 PAS-associated, C-terminal THII_3835 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_3835 IPR001789 Signal transduction response regulator, receiver domain THII_3835 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THII_3835 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THII_3835 IPR013767 PAS fold THII_3835 IPR035965 PAS domain superfamily THII_3835 IPR036641 HPT domain superfamily THII_3835 IPR000014 PAS domain THII_3835 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THII_3835 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THII_3835 IPR005467 Histidine kinase domain THII_3835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3835 IPR011006 CheY-like superfamily THII_3835 IPR000700 PAS-associated, C-terminal THII_3835 IPR003594 Histidine kinase/HSP90-like ATPase THII_3836 IPR001519 Ferritin THII_3836 IPR041719 Ferritin, prokaryotic-type THII_3836 IPR008331 Ferritin/DPS protein domain THII_3836 IPR012347 Ferritin-like THII_3836 IPR009078 Ferritin-like superfamily THII_3836 IPR009040 Ferritin-like diiron domain THII_3837 IPR002912 ACT domain THII_3837 IPR022986 Uncharacterised protein family UPF0237, ACT-type THII_3838 IPR036821 Peptide deformylase superfamily THII_3838 IPR023635 Peptide deformylase THII_3843 IPR001082 Fimbrial protein pilin THII_3843 IPR012902 Prokaryotic N-terminal methylation site THII_3850 IPR023035 Ribosomal protein S9, bacterial/plastid THII_3850 IPR020568 Ribosomal protein S5 domain 2-type fold THII_3850 IPR000754 Ribosomal protein S9 THII_3850 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_3850 IPR020574 Ribosomal protein S9, conserved site THII_3851 IPR005822 Ribosomal protein L13 THII_3851 IPR005823 Ribosomal protein L13, bacterial-type THII_3851 IPR023563 Ribosomal protein L13, conserved site THII_3851 IPR036899 Ribosomal protein L13 superfamily THII_3857 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3857 IPR039420 Transcriptional regulatory protein WalR-like THII_3857 IPR001789 Signal transduction response regulator, receiver domain THII_3857 IPR011006 CheY-like superfamily THII_3857 IPR001867 OmpR/PhoB-type DNA-binding domain THII_3858 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site THII_3858 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal THII_3858 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit THII_3858 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3858 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain THII_3858 IPR005884 Fumarate reductase, flavoprotein subunit THII_3858 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily THII_3858 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily THII_3860 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THII_3860 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_3860 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_3860 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein THII_3860 IPR012675 Beta-grasp domain superfamily THII_3860 IPR009051 Alpha-helical ferredoxin THII_3860 IPR036010 2Fe-2S ferredoxin-like superfamily THII_3860 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site THII_3860 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal THII_3861 IPR008258 Transglycosylase SLT domain 1 THII_3861 IPR010090 Phage tail tape measure protein THII_3861 IPR000189 Prokaryotic transglycosylase, active site THII_3861 IPR016047 Peptidase M23 THII_3861 IPR023346 Lysozyme-like domain superfamily THII_3861 IPR011055 Duplicated hybrid motif THII_3864 IPR020541 Chorismate synthase, conserved site THII_3864 IPR000453 Chorismate synthase THII_3864 IPR035904 Chorismate synthase AroC superfamily THII_3866 IPR015797 NUDIX hydrolase-like domain superfamily THII_3866 IPR005760 A/G-specific adenine glycosylase MutY THII_3866 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal THII_3866 IPR000445 Helix-hairpin-helix motif THII_3866 IPR011257 DNA glycosylase THII_3866 IPR004036 Endonuclease III-like, conserved site-2 THII_3866 IPR003265 HhH-GPD domain THII_3866 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif THII_3866 IPR004035 Endonuclease III, iron-sulphur binding site THII_3866 IPR029119 MutY, C-terminal THII_3867 IPR036766 Fe(II) trafficking protein YggX superfamily THII_3867 IPR007457 Fe(II) trafficking protein YggX THII_3869 IPR009010 Aspartate decarboxylase-like domain superfamily THII_3869 IPR003190 Aspartate decarboxylase THII_3870 IPR022967 RNA-binding domain, S1 THII_3870 IPR004659 Ribonuclease E/G THII_3870 IPR003029 S1 domain THII_3870 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G THII_3870 IPR012340 Nucleic acid-binding, OB-fold THII_3872 IPR011006 CheY-like superfamily THII_3872 IPR003593 AAA+ ATPase domain THII_3872 IPR009057 Homeobox-like domain superfamily THII_3872 IPR002197 DNA binding HTH domain, Fis-type THII_3872 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3872 IPR001789 Signal transduction response regulator, receiver domain THII_3872 IPR002078 RNA polymerase sigma factor 54 interaction domain THII_3872 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_3872 IPR025944 Sigma-54 interaction domain, conserved site THII_3873 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3873 IPR023386 Lysine-tRNA ligase, insertion domain superfamily THII_3873 IPR002904 Lysine-tRNA ligase THII_3873 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THII_3873 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding THII_3873 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 THII_3879 IPR023803 Ribosomal protein S16 domain superfamily THII_3879 IPR000307 Ribosomal protein S16 THII_3879 IPR020592 Ribosomal protein S16, conserved site THII_3880 IPR002676 RimM, N-terminal THII_3880 IPR027275 PRC-barrel domain THII_3880 IPR011961 16S rRNA processing protein RimM THII_3880 IPR036976 RimM, N-terminal domain superfamily THII_3880 IPR011033 PRC-barrel-like superfamily THII_3880 IPR009000 Translation protein, beta-barrel domain superfamily THII_3881 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain THII_3881 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THII_3881 IPR029028 Alpha/beta knot methyltransferases THII_3881 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria THII_3881 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal THII_3882 IPR001857 Ribosomal protein L19 THII_3882 IPR008991 Translation protein SH3-like domain superfamily THII_3882 IPR018257 Ribosomal protein L19, conserved site THII_3882 IPR038657 Ribosomal protein L19 superfamily THII_3883 IPR017937 Thioredoxin, conserved site THII_3883 IPR033954 Disulphide bond isomerase, DsbC/G THII_3883 IPR036249 Thioredoxin-like superfamily THII_3883 IPR012336 Thioredoxin-like fold THII_3883 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily THII_3883 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal THII_3889 IPR029787 Nucleotide cyclase THII_3889 IPR000160 GGDEF domain THII_3889 IPR035919 EAL domain superfamily THII_3889 IPR001633 EAL domain THII_3889 IPR005330 MHYT domain THII_3891 IPR001972 Stomatin family THII_3891 IPR032435 Band 7, C-terminal extension THII_3891 IPR036013 Band 7/SPFH domain superfamily THII_3891 IPR001107 Band 7 domain THII_3891 IPR018080 Band 7/stomatin-like, conserved site THII_3892 IPR036670 SecA, preprotein cross-linking domain superfamily THII_3892 IPR000185 Protein translocase subunit SecA THII_3892 IPR036266 SecA, Wing/Scaffold superfamily THII_3892 IPR020937 SecA conserved site THII_3892 IPR011115 SecA DEAD-like, N-terminal THII_3892 IPR014018 SecA motor DEAD THII_3892 IPR011130 SecA, preprotein cross-linking domain THII_3892 IPR004027 SEC-C motif THII_3892 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3892 IPR011116 SecA Wing/Scaffold THII_3895 IPR016181 Acyl-CoA N-acyltransferase THII_3895 IPR006464 N-acetyltransferase RimI/Ard1 THII_3895 IPR000182 GNAT domain THII_3896 IPR005122 Uracil-DNA glycosylase-like THII_3896 IPR005273 Uracil-DNA glycosylase family 4 THII_3896 IPR036895 Uracil-DNA glycosylase-like domain superfamily THII_3897 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site THII_3897 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain THII_3897 IPR000891 Pyruvate carboxyltransferase THII_3897 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily THII_3897 IPR013785 Aldolase-type TIM barrel THII_3897 IPR005671 2-isopropylmalate synthase, bacterial-type THII_3898 IPR015946 K homology domain-like, alpha/beta THII_3898 IPR036102 OsmC/Ohr superfamily THII_3898 IPR003718 OsmC/Ohr family THII_3899 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic THII_3899 IPR009165 S-adenosylmethionine decarboxylase, bacterial THII_3899 IPR016067 S-adenosylmethionine decarboxylase, core THII_3900 IPR001279 Metallo-beta-lactamase THII_3900 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_3900 IPR013471 Ribonuclease Z/BN THII_3902 IPR037522 HD-GYP domain THII_3902 IPR011006 CheY-like superfamily THII_3902 IPR003607 HD/PDEase domain THII_3902 IPR001789 Signal transduction response regulator, receiver domain THII_3904 IPR004619 Type III pantothenate kinase THII_3905 IPR004408 Biotin--acetyl-CoA-carboxylase ligase THII_3905 IPR004409 Biotin operon repressor, helix-turn-helix domain THII_3905 IPR003142 Biotin protein ligase, C-terminal THII_3905 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain THII_3905 IPR008988 Transcriptional repressor, C-terminal THII_3905 IPR030855 Bifunctional ligase/repressor BirA THII_3906 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3906 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase THII_3906 IPR004821 Cytidyltransferase-like domain THII_3907 IPR004394 Protein Iojap/ribosomal silencing factor RsfS THII_3910 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3910 IPR003593 AAA+ ATPase domain THII_3910 IPR003439 ABC transporter-like THII_3910 IPR017871 ABC transporter, conserved site THII_3910 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal THII_3911 IPR035919 EAL domain superfamily THII_3911 IPR000160 GGDEF domain THII_3911 IPR005330 MHYT domain THII_3911 IPR029787 Nucleotide cyclase THII_3911 IPR001633 EAL domain THII_3912 IPR004960 Bacterial lipid A biosynthesis acyltransferase THII_3912 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP THII_3912 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase THII_3913 IPR036737 OmpA-like domain superfamily THII_3913 IPR006690 Outer membrane protein, OmpA-like, conserved site THII_3913 IPR006665 OmpA-like domain THII_3913 IPR006664 Outer membrane protein, bacterial THII_3915 IPR002668 Concentrative nucleoside transporter N-terminal domain THII_3915 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain THII_3915 IPR008276 Concentrative nucleoside transporter THII_3915 IPR011657 Concentrative nucleoside transporter C-terminal domain THII_3915 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial THII_3921 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase THII_3921 IPR036291 NAD(P)-binding domain superfamily THII_3926 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY THII_3927 IPR001460 Penicillin-binding protein, transpeptidase THII_3927 IPR031376 Penicillin-binding protein, OB-like domain THII_3927 IPR036950 Penicillin binding protein transglycosylase domain THII_3927 IPR023346 Lysozyme-like domain superfamily THII_3927 IPR001264 Glycosyl transferase, family 51 THII_3927 IPR012338 Beta-lactamase/transpeptidase-like THII_3933 IPR004845 Type II secretion system GspD, conserved site THII_3933 IPR004846 Type II/III secretion system THII_3933 IPR011662 Secretin/TonB, short N-terminal domain THII_3933 IPR013355 Type IV pilus secretin PilQ THII_3933 IPR038591 NolW-like superfamily THII_3933 IPR005644 NolW-like THII_3933 IPR001775 GspD/PilQ family THII_3933 IPR021731 AMIN domain THII_3937 IPR036676 PurM-like, C-terminal domain superfamily THII_3937 IPR016188 PurM-like, N-terminal domain THII_3937 IPR010918 PurM-like, C-terminal domain THII_3937 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase THII_3937 IPR036921 PurM-like, N-terminal domain superfamily THII_3938 IPR001555 Phosphoribosylglycinamide formyltransferase, active site THII_3938 IPR004607 Phosphoribosylglycinamide formyltransferase THII_3938 IPR036477 Formyl transferase, N-terminal domain superfamily THII_3938 IPR002376 Formyl transferase, N-terminal THII_3941 IPR001518 Argininosuccinate synthase THII_3941 IPR023434 Argininosuccinate synthase, type 1 subfamily THII_3941 IPR018223 Argininosuccinate synthase, conserved site THII_3941 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body THII_3941 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3944 IPR001036 Acriflavin resistance protein THII_3944 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_3945 IPR006143 RND efflux pump, membrane fusion protein THII_3945 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THII_3946 IPR003660 HAMP domain THII_3946 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily THII_3946 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_3946 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding THII_3946 IPR004090 Chemotaxis methyl-accepting receptor THII_3946 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site THII_3947 IPR002502 N-acetylmuramoyl-L-alanine amidase domain THII_3947 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily THII_3950 IPR014319 Phage shock protein, PspA THII_3950 IPR007157 PspA/IM30