THII_0397 24941273f2dc8c61716d655248c945c0 91 Gene3D G3DSA:1.10.260.40 20 90 9.0E-16 T 15-10-2018 THII_0397 24941273f2dc8c61716d655248c945c0 91 SUPERFAMILY SSF47413 22 91 6.44E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_0397 24941273f2dc8c61716d655248c945c0 91 Pfam PF01381 Helix-turn-helix 35 87 1.7E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_0397 24941273f2dc8c61716d655248c945c0 91 SMART SM00530 34 89 9.7E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:3.40.50.2300 19 163 5.3E-28 T 15-10-2018 THII_3768 60fa80fe966693f6eba8716084221e69 1693 Pfam PF13426 PAS domain 894 995 6.0E-12 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 Pfam PF13426 PAS domain 1018 1120 3.6E-7 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 Pfam PF13426 PAS domain 1141 1243 1.1E-13 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00052 1426 1672 2.8E-94 T 15-10-2018 IPR001633 EAL domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 SUPERFAMILY SSF141868 1431 1680 1.01E-82 T 15-10-2018 IPR035919 EAL domain superfamily THII_3768 60fa80fe966693f6eba8716084221e69 1693 SUPERFAMILY SSF52172 17 154 8.68E-30 T 15-10-2018 IPR011006 CheY-like superfamily THII_3768 60fa80fe966693f6eba8716084221e69 1693 SUPERFAMILY SSF55785 865 989 6.7E-25 T 15-10-2018 IPR035965 PAS domain superfamily THII_3768 60fa80fe966693f6eba8716084221e69 1693 SUPERFAMILY SSF55785 993 1120 1.12E-18 T 15-10-2018 IPR035965 PAS domain superfamily THII_3768 60fa80fe966693f6eba8716084221e69 1693 Pfam PF08447 PAS fold 375 461 1.7E-16 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_3768 60fa80fe966693f6eba8716084221e69 1693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 475 595 3.5E-10 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 348 473 2.6E-12 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1135 1250 1.1E-19 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 881 1003 4.0E-21 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1013 1129 2.3E-17 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 597 717 1.2E-13 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 SUPERFAMILY SSF55073 1260 1418 6.51E-52 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3768 60fa80fe966693f6eba8716084221e69 1693 SUPERFAMILY SSF55785 585 708 1.82E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_3768 60fa80fe966693f6eba8716084221e69 1693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1255 1411 1.3E-50 T 15-10-2018 IPR000160 GGDEF domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:3.30.450.20 1009 1125 9.6E-25 T 15-10-2018 THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:3.30.450.20 348 419 3.0E-18 T 15-10-2018 THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:3.30.450.20 473 596 8.5E-23 T 15-10-2018 THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:3.30.450.20 597 723 2.7E-24 T 15-10-2018 THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:3.20.20.450 1430 1686 7.6E-91 T 15-10-2018 IPR035919 EAL domain superfamily THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:2.10.70.100 422 469 1.8E-19 T 15-10-2018 THII_3768 60fa80fe966693f6eba8716084221e69 1693 SUPERFAMILY SSF55785 360 469 6.12E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_3768 60fa80fe966693f6eba8716084221e69 1693 SUPERFAMILY SSF55781 170 340 2.18E-10 T 15-10-2018 THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00091 351 419 0.019 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00091 600 666 1.9E-9 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00091 479 544 5.4E-4 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00091 1130 1197 3.3E-5 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00091 1008 1075 7.3E-4 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00091 881 948 2.4E-10 T 15-10-2018 IPR000014 PAS domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 Pfam PF00072 Response regulator receiver domain 21 122 5.9E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3768 60fa80fe966693f6eba8716084221e69 1693 SUPERFAMILY SSF55785 778 878 1.09E-6 T 15-10-2018 IPR035965 PAS domain superfamily THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:3.30.450.20 890 1008 3.0E-25 T 15-10-2018 THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:3.30.450.20 776 881 1.0E-5 T 15-10-2018 THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:3.30.70.270 1255 1429 3.0E-65 T 15-10-2018 THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00267 1244 1416 5.8E-67 T 15-10-2018 IPR000160 GGDEF domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 Pfam PF00563 EAL domain 1432 1667 7.9E-68 T 15-10-2018 IPR001633 EAL domain THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:3.30.450.20 1129 1254 6.8E-34 T 15-10-2018 THII_3768 60fa80fe966693f6eba8716084221e69 1693 Pfam PF08448 PAS fold 486 590 3.2E-9 T 15-10-2018 IPR013656 PAS fold-4 THII_3768 60fa80fe966693f6eba8716084221e69 1693 Pfam PF08448 PAS fold 606 712 9.5E-14 T 15-10-2018 IPR013656 PAS fold-4 THII_3768 60fa80fe966693f6eba8716084221e69 1693 Gene3D G3DSA:3.30.450.40 164 347 3.7E-13 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00086 828 869 400.0 T 15-10-2018 IPR001610 PAC motif THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00086 546 588 58.0 T 15-10-2018 IPR001610 PAC motif THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00086 668 710 310.0 T 15-10-2018 IPR001610 PAC motif THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00086 1081 1122 0.0049 T 15-10-2018 IPR001610 PAC motif THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00086 425 467 1.3E-11 T 15-10-2018 IPR001610 PAC motif THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00086 1202 1244 6.8E-6 T 15-10-2018 IPR001610 PAC motif THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00086 954 996 4.7E-4 T 15-10-2018 IPR001610 PAC motif THII_3768 60fa80fe966693f6eba8716084221e69 1693 SUPERFAMILY SSF55785 1135 1242 1.92E-27 T 15-10-2018 IPR035965 PAS domain superfamily THII_3768 60fa80fe966693f6eba8716084221e69 1693 SMART SM00448 19 132 7.8E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3768 60fa80fe966693f6eba8716084221e69 1693 SUPERFAMILY SSF55785 464 586 7.85E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_3768 60fa80fe966693f6eba8716084221e69 1693 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1253 1414 9.9E-43 T 15-10-2018 IPR000160 GGDEF domain THII_2897 ea82e15ddc23b9f67ea2d6bd85c1ed27 371 Gene3D G3DSA:2.130.10.10 212 362 7.8E-20 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2897 ea82e15ddc23b9f67ea2d6bd85c1ed27 371 Gene3D G3DSA:2.130.10.10 4 206 1.6E-21 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2897 ea82e15ddc23b9f67ea2d6bd85c1ed27 371 Pfam PF02239 Cytochrome D1 heme domain 245 355 7.3E-7 T 15-10-2018 THII_2897 ea82e15ddc23b9f67ea2d6bd85c1ed27 371 SUPERFAMILY SSF51004 33 360 4.05E-38 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily THII_2392 de791def49972d95bf6ab0843e420c08 385 Pfam PF01145 SPFH domain / Band 7 family 80 256 2.5E-26 T 15-10-2018 IPR001107 Band 7 domain THII_2392 de791def49972d95bf6ab0843e420c08 385 SMART SM00244 76 241 2.3E-33 T 15-10-2018 IPR001107 Band 7 domain THII_2392 de791def49972d95bf6ab0843e420c08 385 Gene3D G3DSA:3.30.479.30 107 243 2.4E-17 T 15-10-2018 THII_2392 de791def49972d95bf6ab0843e420c08 385 SUPERFAMILY SSF117892 111 246 3.79E-19 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily THII_2392 de791def49972d95bf6ab0843e420c08 385 TIGRFAM TIGR01933 hflK: HflK protein 78 343 2.6E-96 T 15-10-2018 IPR010201 HflK GO:0016021 THII_2392 de791def49972d95bf6ab0843e420c08 385 Pfam PF12221 Bacterial membrane protein N terminal 1 45 5.0E-16 T 15-10-2018 IPR020980 Menbrane protein HflK, N-terminal THII_1638 e4da276076bf69ec75de14ea291762e1 526 SUPERFAMILY SSF69322 302 492 9.02E-10 T 15-10-2018 THII_1638 e4da276076bf69ec75de14ea291762e1 526 Gene3D G3DSA:2.130.10.30 73 291 7.2E-18 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_1638 e4da276076bf69ec75de14ea291762e1 526 SUPERFAMILY SSF50985 5 279 2.09E-26 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_1638 e4da276076bf69ec75de14ea291762e1 526 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 105 127 1.8E-5 T 15-10-2018 THII_1638 e4da276076bf69ec75de14ea291762e1 526 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 9 36 9.4E-8 T 15-10-2018 THII_1638 e4da276076bf69ec75de14ea291762e1 526 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 46 69 1.1E-6 T 15-10-2018 THII_1638 e4da276076bf69ec75de14ea291762e1 526 Gene3D G3DSA:2.130.10.30 2 70 1.0E-9 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_1639 a7d2278ea80c98e315651e90a72ce188 368 SUPERFAMILY SSF53448 11 310 2.34E-29 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1639 a7d2278ea80c98e315651e90a72ce188 368 Pfam PF13641 Glycosyltransferase like family 2 10 258 6.5E-15 T 15-10-2018 THII_1639 a7d2278ea80c98e315651e90a72ce188 368 Gene3D G3DSA:3.90.550.10 6 268 1.9E-24 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3796 eebf6eaa37e27866e72c9e99c474146f 126 Pfam PF08870 DNA sulphur modification protein DndE 6 114 2.8E-37 T 15-10-2018 IPR014969 DNA sulphur modification protein DndE THII_3796 eebf6eaa37e27866e72c9e99c474146f 126 Gene3D G3DSA:1.10.1220.160 4 111 7.9E-6 T 15-10-2018 IPR038472 DndE superfamily THII_3796 eebf6eaa37e27866e72c9e99c474146f 126 TIGRFAM TIGR03184 DNA_S_dndE: DNA sulfur modification protein DndE 6 108 1.8E-35 T 15-10-2018 IPR014969 DNA sulphur modification protein DndE THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Pfam PF13185 GAF domain 542 680 1.2E-12 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SUPERFAMILY SSF55874 843 1024 3.27E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Gene3D G3DSA:3.30.565.10 853 1028 8.3E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SMART SM00065 543 690 2.0E-7 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SUPERFAMILY SSF52172 1080 1198 1.18E-24 T 15-10-2018 IPR011006 CheY-like superfamily THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SMART SM00387 901 1026 1.3E-33 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 787 854 6.7E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SUPERFAMILY SSF52172 1349 1469 1.71E-36 T 15-10-2018 IPR011006 CheY-like superfamily THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 901 1025 7.7E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Gene3D G3DSA:1.10.287.130 750 852 1.8E-24 T 15-10-2018 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 969 979 1.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 986 1004 1.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 965 1.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1010 1023 1.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SMART SM00448 1083 1193 6.1E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SMART SM00448 1351 1465 2.4E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SUPERFAMILY SSF55781 511 681 7.46E-23 T 15-10-2018 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 160 7.7E-9 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SUPERFAMILY SSF52172 1206 1307 2.85E-8 T 15-10-2018 IPR011006 CheY-like superfamily THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SUPERFAMILY SSF47384 772 855 1.59E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Gene3D G3DSA:3.40.50.12740 1083 1334 6.8E-38 T 15-10-2018 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Gene3D G3DSA:3.40.50.12740 1350 1471 1.7E-40 T 15-10-2018 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Pfam PF00072 Response regulator receiver domain 1085 1193 6.0E-17 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Pfam PF00072 Response regulator receiver domain 1208 1315 2.5E-6 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Pfam PF00072 Response regulator receiver domain 1353 1464 1.9E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Gene3D G3DSA:3.30.450.40 517 685 1.8E-16 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 Gene3D G3DSA:1.20.1480.50 284 387 4.4E-8 T 15-10-2018 THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SMART SM01358 39 293 1.4E-19 T 15-10-2018 IPR032255 Helical bimodular sensor domain THII_1243 0a58fe3a17f8111ce40dde702275e9cd 1471 SMART SM00388 786 854 6.7E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1923 3ed70b321186419c76a0190efe0cb940 761 Pfam PF00905 Penicillin binding protein transpeptidase domain 443 682 3.5E-21 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 THII_1923 3ed70b321186419c76a0190efe0cb940 761 Pfam PF14814 Bifunctional transglycosylase second domain 82 166 1.1E-22 T 15-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_1923 3ed70b321186419c76a0190efe0cb940 761 SUPERFAMILY SSF56601 331 742 2.0E-108 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like THII_1923 3ed70b321186419c76a0190efe0cb940 761 PIRSF PIRSF002799 7 746 8.1E-293 T 15-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_1923 3ed70b321186419c76a0190efe0cb940 761 Pfam PF00912 Transglycosylase 171 349 7.7E-59 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_1923 3ed70b321186419c76a0190efe0cb940 761 Gene3D G3DSA:3.30.2060.10 80 169 2.0E-254 T 15-10-2018 THII_1923 3ed70b321186419c76a0190efe0cb940 761 Gene3D G3DSA:3.40.710.10 72 733 2.0E-254 T 15-10-2018 THII_1923 3ed70b321186419c76a0190efe0cb940 761 SUPERFAMILY SSF53955 163 378 9.28E-68 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_1923 3ed70b321186419c76a0190efe0cb940 761 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 40 743 6.7E-265 T 15-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_1923 3ed70b321186419c76a0190efe0cb940 761 Gene3D G3DSA:1.10.3810.10 170 373 2.0E-254 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_0544 18fbd368cfea5187961636573bfa7756 369 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 85 355 2.0E-54 T 15-10-2018 IPR006507 Uncharacterised protein family UPF0283 THII_0544 18fbd368cfea5187961636573bfa7756 369 Pfam PF05128 Domain of unknown function (DUF697) 196 355 1.0E-41 T 15-10-2018 IPR021147 Protein of unknown function DUF697 THII_2569 f1fa60c4826359a57ca532c98d811b4c 177 Pfam PF04060 Putative Fe-S cluster 42 74 5.2E-13 T 15-10-2018 IPR007202 4Fe-4S domain GO:0051536 THII_2569 f1fa60c4826359a57ca532c98d811b4c 177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 111 122 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2569 f1fa60c4826359a57ca532c98d811b4c 177 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 175 7.0E-60 T 15-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 THII_2569 f1fa60c4826359a57ca532c98d811b4c 177 Gene3D G3DSA:3.20.20.20 33 101 7.6E-13 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_2569 f1fa60c4826359a57ca532c98d811b4c 177 Pfam PF14697 4Fe-4S dicluster domain 104 154 2.8E-14 T 15-10-2018 THII_2569 f1fa60c4826359a57ca532c98d811b4c 177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2569 f1fa60c4826359a57ca532c98d811b4c 177 PIRSF PIRSF005784 1 177 1.2E-61 T 15-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 THII_2569 f1fa60c4826359a57ca532c98d811b4c 177 SUPERFAMILY SSF54862 39 170 4.89E-25 T 15-10-2018 THII_2569 f1fa60c4826359a57ca532c98d811b4c 177 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 2 163 22.898 T 15-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 THII_2569 f1fa60c4826359a57ca532c98d811b4c 177 Gene3D G3DSA:3.30.70.20 106 156 2.3E-12 T 15-10-2018 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 43.541 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 451 1.4E-189 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 Pfam PF13481 AAA domain 79 222 1.2E-14 T 15-10-2018 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 SUPERFAMILY SSF54211 255 452 1.37E-40 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 SUPERFAMILY SSF52540 70 290 1.08E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 SMART SM00382 89 244 1.6E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 PRINTS PR01874 DNA repair protein radA signature 81 109 3.3E-92 T 15-10-2018 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 PRINTS PR01874 DNA repair protein radA signature 322 345 3.3E-92 T 15-10-2018 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 PRINTS PR01874 DNA repair protein radA signature 248 274 3.3E-92 T 15-10-2018 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 PRINTS PR01874 DNA repair protein radA signature 213 241 3.3E-92 T 15-10-2018 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 PRINTS PR01874 DNA repair protein radA signature 10 34 3.3E-92 T 15-10-2018 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 PRINTS PR01874 DNA repair protein radA signature 174 198 3.3E-92 T 15-10-2018 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 PRINTS PR01874 DNA repair protein radA signature 124 141 3.3E-92 T 15-10-2018 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 Gene3D G3DSA:3.30.230.10 317 456 2.9E-17 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 Gene3D G3DSA:3.40.50.300 67 289 3.0E-43 T 15-10-2018 THII_0699 9e3b413dd8c395e1d0dffa8563181ac9 471 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 430 1.2E-9 T 15-10-2018 THII_0355 2640447b49ffafb68401478ed22057d6 630 Gene3D G3DSA:3.30.479.30 69 189 1.6E-25 T 15-10-2018 THII_0355 2640447b49ffafb68401478ed22057d6 630 Pfam PF01145 SPFH domain / Band 7 family 49 188 5.7E-16 T 15-10-2018 IPR001107 Band 7 domain THII_0355 2640447b49ffafb68401478ed22057d6 630 SMART SM00244 29 198 0.0014 T 15-10-2018 IPR001107 Band 7 domain THII_0355 2640447b49ffafb68401478ed22057d6 630 Pfam PF15975 Flotillin 471 591 1.1E-38 T 15-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 THII_0355 2640447b49ffafb68401478ed22057d6 630 SUPERFAMILY SSF117892 60 203 5.49E-22 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily THII_3859 dc722a2f1ca46cd47c4afeef88885275 59 Pfam PF02910 Fumarate reductase flavoprotein C-term 2 58 5.3E-10 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_3859 dc722a2f1ca46cd47c4afeef88885275 59 SUPERFAMILY SSF46977 2 58 4.09E-11 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_1065 d2e41274c95607700fa1cece7a62cf65 149 Gene3D G3DSA:1.20.1220.20 2 149 1.5E-31 T 15-10-2018 THII_1065 d2e41274c95607700fa1cece7a62cf65 149 Pfam PF01724 Domain of unknown function DUF29 8 144 5.6E-53 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2935 e8b0b62638c3d0cfa3ac2eefa78224c0 210 SUPERFAMILY SSF63380 1 93 1.19E-21 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel THII_2935 e8b0b62638c3d0cfa3ac2eefa78224c0 210 PIRSF PIRSF000498 1 210 3.5E-60 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_2935 e8b0b62638c3d0cfa3ac2eefa78224c0 210 SUPERFAMILY SSF63380 94 203 3.06E-28 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel THII_2935 e8b0b62638c3d0cfa3ac2eefa78224c0 210 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 204 7.0E-63 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_2935 e8b0b62638c3d0cfa3ac2eefa78224c0 210 Gene3D G3DSA:2.40.30.20 102 201 1.7E-25 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_2935 e8b0b62638c3d0cfa3ac2eefa78224c0 210 Pfam PF00677 Lumazine binding domain 3 86 2.4E-17 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_2935 e8b0b62638c3d0cfa3ac2eefa78224c0 210 Pfam PF00677 Lumazine binding domain 100 187 5.8E-22 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_2935 e8b0b62638c3d0cfa3ac2eefa78224c0 210 Gene3D G3DSA:2.40.30.20 1 89 8.2E-24 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 Gene3D G3DSA:3.30.499.10 327 471 3.0E-48 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 Pfam PF00330 Aconitase family (aconitate hydratase) 8 462 2.1E-155 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 Gene3D G3DSA:3.30.499.20 5 290 5.2E-96 T 15-10-2018 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 471 58.551 T 15-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 470 3.5E-231 T 15-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 PRINTS PR00415 Aconitase family signature 86 99 1.3E-49 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 PRINTS PR00415 Aconitase family signature 347 358 1.3E-49 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 PRINTS PR00415 Aconitase family signature 123 136 1.3E-49 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 PRINTS PR00415 Aconitase family signature 290 304 1.3E-49 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 PRINTS PR00415 Aconitase family signature 213 226 1.3E-49 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 PRINTS PR00415 Aconitase family signature 137 152 1.3E-49 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 PRINTS PR00415 Aconitase family signature 112 120 1.3E-49 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 PRINTS PR00415 Aconitase family signature 199 212 1.3E-49 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 PRINTS PR00415 Aconitase family signature 404 417 1.3E-49 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 ProSitePatterns PS00450 Aconitase family signature 1. 343 359 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 ProSitePatterns PS01244 Aconitase family signature 2. 404 417 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 THII_1823 c4c71d858d7c500ee605c72e5d0499f2 471 SUPERFAMILY SSF53732 3 470 2.49E-159 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 THII_0140 277257bc10fd7fa9dda4df777f6cfbdd 250 Gene3D G3DSA:2.50.20.10 20 243 3.7E-36 T 15-10-2018 THII_0140 277257bc10fd7fa9dda4df777f6cfbdd 250 Pfam PF17131 Outer membrane lipoprotein-sorting protein 71 241 3.8E-31 T 15-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein THII_0140 277257bc10fd7fa9dda4df777f6cfbdd 250 PIRSF PIRSF028205 4 246 1.3E-71 T 15-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 THII_2082 c7a3fb9b8693924a4b631dd45f16a5a0 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 351 6.1E-16 T 15-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 THII_2082 c7a3fb9b8693924a4b631dd45f16a5a0 365 Gene3D G3DSA:3.30.1360.120 7 232 2.7E-83 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 THII_2082 c7a3fb9b8693924a4b631dd45f16a5a0 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 357 9.6E-131 T 15-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 THII_2082 c7a3fb9b8693924a4b631dd45f16a5a0 365 SUPERFAMILY SSF101790 271 359 5.07E-22 T 15-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal THII_2082 c7a3fb9b8693924a4b631dd45f16a5a0 365 SUPERFAMILY SSF103025 3 278 4.55E-93 T 15-10-2018 THII_2082 c7a3fb9b8693924a4b631dd45f16a5a0 365 Gene3D G3DSA:4.10.1250.10 233 277 4.3E-24 T 15-10-2018 THII_2082 c7a3fb9b8693924a4b631dd45f16a5a0 365 PIRSF PIRSF006487 1 363 9.4E-85 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 THII_2082 c7a3fb9b8693924a4b631dd45f16a5a0 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 357 44.164 T 15-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 THII_2082 c7a3fb9b8693924a4b631dd45f16a5a0 365 Gene3D G3DSA:2.40.30.110 280 365 4.9E-26 T 15-10-2018 THII_2082 c7a3fb9b8693924a4b631dd45f16a5a0 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 255 6.4E-87 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain THII_2082 c7a3fb9b8693924a4b631dd45f16a5a0 365 Gene3D G3DSA:3.30.70.1400 51 138 2.7E-83 T 15-10-2018 THII_2531 b9f0e8bc92fbb73f8cca5d5b377979c5 440 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 1 437 32.439 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 THII_2531 b9f0e8bc92fbb73f8cca5d5b377979c5 440 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 1 435 1.3E-131 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 THII_2531 b9f0e8bc92fbb73f8cca5d5b377979c5 440 Gene3D G3DSA:3.90.190.20 298 433 1.6E-45 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_2531 b9f0e8bc92fbb73f8cca5d5b377979c5 440 Gene3D G3DSA:3.40.50.720 1 85 5.8E-18 T 15-10-2018 THII_2531 b9f0e8bc92fbb73f8cca5d5b377979c5 440 SUPERFAMILY SSF51984 2 86 2.35E-11 T 15-10-2018 THII_2531 b9f0e8bc92fbb73f8cca5d5b377979c5 440 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 368 2.8E-5 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 THII_2531 b9f0e8bc92fbb73f8cca5d5b377979c5 440 SUPERFAMILY SSF53244 297 437 1.37E-45 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_2531 b9f0e8bc92fbb73f8cca5d5b377979c5 440 Gene3D G3DSA:3.40.1190.10 86 297 1.8E-63 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_2531 b9f0e8bc92fbb73f8cca5d5b377979c5 440 Pfam PF08245 Mur ligase middle domain 102 277 5.4E-28 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 THII_2531 b9f0e8bc92fbb73f8cca5d5b377979c5 440 SUPERFAMILY SSF53623 88 295 3.27E-51 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_0850 e0165340214e26f47363656acac12454 129 Gene3D G3DSA:2.30.30.220 1 122 2.6E-50 T 15-10-2018 IPR036760 SspB-like superfamily THII_0850 e0165340214e26f47363656acac12454 129 Pfam PF04386 Stringent starvation protein B 3 116 6.1E-34 T 15-10-2018 IPR007481 Stringent starvation protein B THII_0850 e0165340214e26f47363656acac12454 129 PIRSF PIRSF005276 1 129 1.2E-49 T 15-10-2018 IPR007481 Stringent starvation protein B THII_0850 e0165340214e26f47363656acac12454 129 SUPERFAMILY SSF101738 1 112 5.62E-46 T 15-10-2018 IPR036760 SspB-like superfamily THII_3658 5afa1687db28b27c792e4971016af79b 417 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 28 203 7.3E-53 T 15-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 THII_3658 5afa1687db28b27c792e4971016af79b 417 Pfam PF01435 Peptidase family M48 207 410 1.3E-38 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 THII_3658 5afa1687db28b27c792e4971016af79b 417 Gene3D G3DSA:3.30.2010.10 203 284 8.9E-31 T 15-10-2018 THII_2327 642eeb284f7bec0d7dbff9282f12d5a5 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 327 1.9E-135 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 THII_2327 642eeb284f7bec0d7dbff9282f12d5a5 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 45.007 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 THII_2327 642eeb284f7bec0d7dbff9282f12d5a5 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 3.9E-74 T 15-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 THII_2327 642eeb284f7bec0d7dbff9282f12d5a5 338 SUPERFAMILY SSF51735 1 182 1.14E-74 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2327 642eeb284f7bec0d7dbff9282f12d5a5 338 Gene3D G3DSA:3.40.50.720 1 181 4.8E-77 T 15-10-2018 THII_2327 642eeb284f7bec0d7dbff9282f12d5a5 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.3E-66 T 15-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 THII_2327 642eeb284f7bec0d7dbff9282f12d5a5 338 SUPERFAMILY SSF48179 183 332 1.39E-70 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 THII_2327 642eeb284f7bec0d7dbff9282f12d5a5 338 PIRSF PIRSF000116 202 332 5.1E-13 T 15-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 THII_2327 642eeb284f7bec0d7dbff9282f12d5a5 338 PIRSF PIRSF000116 4 209 1.6E-44 T 15-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 THII_2327 642eeb284f7bec0d7dbff9282f12d5a5 338 Gene3D G3DSA:1.10.3730.40 182 338 8.0E-75 T 15-10-2018 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:1.20.120.160 1597 1708 1.4E-22 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 930 1045 5.1E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00073 1611 1704 1.6E-4 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:3.30.450.20 558 678 6.3E-10 T 15-10-2018 THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00091 318 384 1.2E-11 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00091 560 623 2.8 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00091 438 504 9.9E-6 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00091 684 750 0.0019 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00091 184 256 1.3 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF47384 804 884 1.45E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00086 263 306 0.22 T 15-10-2018 IPR001610 PAC motif THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00086 756 798 0.032 T 15-10-2018 IPR001610 PAC motif THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00086 391 433 1.1E-6 T 15-10-2018 IPR001610 PAC motif THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00086 510 548 0.49 T 15-10-2018 IPR001610 PAC motif THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00086 630 672 10.0 T 15-10-2018 IPR001610 PAC motif THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00448 1409 1521 2.1E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00448 1078 1196 2.5E-18 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00448 1233 1350 1.4E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:3.30.450.20 307 431 9.9E-28 T 15-10-2018 THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF52172 1075 1199 8.11E-25 T 15-10-2018 IPR011006 CheY-like superfamily THII_0331 2f310d861357861e334195f2d0b86f92 1713 Pfam PF00512 His Kinase A (phospho-acceptor) domain 818 883 9.8E-22 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:3.40.50.2300 1231 1354 1.8E-43 T 15-10-2018 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:3.40.50.12740 1408 1595 3.0E-40 T 15-10-2018 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:3.40.50.12740 1077 1221 8.8E-26 T 15-10-2018 THII_0331 2f310d861357861e334195f2d0b86f92 1713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1006 1024 4.6E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0331 2f310d861357861e334195f2d0b86f92 1713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 971 985 4.6E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0331 2f310d861357861e334195f2d0b86f92 1713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1030 1043 4.6E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0331 2f310d861357861e334195f2d0b86f92 1713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 989 999 4.6E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:3.30.565.10 882 1047 1.6E-53 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:3.30.450.20 183 306 3.2E-14 T 15-10-2018 THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF47226 1595 1705 2.36E-23 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Pfam PF08447 PAS fold 463 532 4.5E-10 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:3.30.450.20 679 792 2.4E-17 T 15-10-2018 THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00387 930 1046 4.0E-40 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF55785 303 431 1.28E-26 T 15-10-2018 IPR035965 PAS domain superfamily THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF52172 1407 1526 6.83E-38 T 15-10-2018 IPR011006 CheY-like superfamily THII_0331 2f310d861357861e334195f2d0b86f92 1713 SMART SM00388 818 883 2.0E-27 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF55785 669 796 6.7E-22 T 15-10-2018 IPR035965 PAS domain superfamily THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF55785 545 670 3.49E-9 T 15-10-2018 IPR035965 PAS domain superfamily THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF55781 11 169 3.36E-6 T 15-10-2018 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Pfam PF01627 Hpt domain 1621 1702 4.9E-13 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF55874 872 1047 2.75E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0331 2f310d861357861e334195f2d0b86f92 1713 Pfam PF13426 PAS domain 702 797 9.5E-7 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 Pfam PF13426 PAS domain 328 432 1.5E-13 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 Pfam PF13426 PAS domain 577 671 0.032 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 Pfam PF13426 PAS domain 195 305 4.5E-6 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF55785 443 550 7.09E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_0331 2f310d861357861e334195f2d0b86f92 1713 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 682 805 7.4E-16 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 316 439 1.1E-25 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 438 554 1.9E-16 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 558 679 2.1E-6 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 180 313 2.1E-9 T 15-10-2018 IPR000014 PAS domain THII_0331 2f310d861357861e334195f2d0b86f92 1713 Pfam PF00072 Response regulator receiver domain 1080 1195 2.9E-15 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Pfam PF00072 Response regulator receiver domain 1411 1520 8.3E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Pfam PF00072 Response regulator receiver domain 1235 1350 1.6E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:3.30.450.40 1 182 6.6E-9 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF55785 173 304 8.66E-14 T 15-10-2018 IPR035965 PAS domain superfamily THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:1.10.287.130 793 881 1.3E-31 T 15-10-2018 THII_0331 2f310d861357861e334195f2d0b86f92 1713 Gene3D G3DSA:3.30.450.20 446 557 5.9E-19 T 15-10-2018 THII_0331 2f310d861357861e334195f2d0b86f92 1713 SUPERFAMILY SSF52172 1231 1360 8.68E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 SUPERFAMILY SSF55874 1660 1844 3.93E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1792 1802 1.2E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1832 1845 1.2E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1774 1788 1.2E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1808 1826 1.2E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 Pfam PF00072 Response regulator receiver domain 1880 1991 2.3E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 Pfam PF01590 GAF domain 1386 1583 9.1E-11 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 SUPERFAMILY SSF56112 6 275 6.74E-50 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 SUPERFAMILY SSF47384 1589 1671 1.47E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 Gene3D G3DSA:1.10.287.130 1595 1671 6.4E-26 T 15-10-2018 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 SMART SM00220 14 283 5.6E-19 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 Gene3D G3DSA:3.40.50.12740 1877 2077 4.6E-35 T 15-10-2018 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 SMART SM00448 1878 1992 1.7E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 SMART SM00387 1738 1848 5.1E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 Gene3D G3DSA:1.10.510.10 3 280 2.1E-40 T 15-10-2018 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 Pfam PF13191 AAA ATPase domain 345 518 1.2E-37 T 15-10-2018 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1605 1671 2.0E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 SUPERFAMILY SSF52172 1877 2007 4.13E-33 T 15-10-2018 IPR011006 CheY-like superfamily THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 15-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 SUPERFAMILY SSF55781 1368 1604 5.02E-21 T 15-10-2018 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 Gene3D G3DSA:3.40.50.300 306 527 1.7E-6 T 15-10-2018 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1739 1846 1.1E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 SMART SM00065 1427 1593 8.4E-15 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 Pfam PF00069 Protein kinase domain 20 261 6.8E-31 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 SUPERFAMILY SSF52540 311 605 1.19E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 SMART SM00388 1605 1671 4.3E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3468 30d5f646b6b854aaf038c37d8036d35b 2106 Gene3D G3DSA:3.30.565.10 1672 1848 4.3E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 SUPERFAMILY SSF55874 269 435 4.85E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 Gene3D G3DSA:3.30.565.10 288 438 2.0E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 1.7E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 1.7E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 1.7E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 SMART SM00387 325 437 9.6E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 Gene3D G3DSA:1.10.287.130 178 277 2.0E-16 T 15-10-2018 THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 SUPERFAMILY SSF47384 196 281 1.41E-16 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 Pfam PF00072 Response regulator receiver domain 40 154 2.5E-9 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 279 3.5E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 Gene3D G3DSA:3.40.50.2300 39 177 7.9E-15 T 15-10-2018 THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 SMART SM00388 211 279 3.6E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 SUPERFAMILY SSF52172 39 208 3.84E-13 T 15-10-2018 IPR011006 CheY-like superfamily THII_0444 ccd6ac19c3c972ec30b7a70733c0bf04 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 436 7.1E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 Gene3D G3DSA:3.30.450.20 418 546 7.0E-27 T 15-10-2018 THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 Gene3D G3DSA:2.10.70.100 634 680 7.2E-14 T 15-10-2018 THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 266 388 1.4E-22 T 15-10-2018 IPR000014 PAS domain THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 557 682 5.6E-11 T 15-10-2018 IPR000014 PAS domain THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 428 555 1.2E-22 T 15-10-2018 IPR000014 PAS domain THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 686 805 2.2E-15 T 15-10-2018 IPR000014 PAS domain THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 Gene3D G3DSA:3.30.450.20 261 377 1.3E-25 T 15-10-2018 THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 Pfam PF08447 PAS fold 584 671 1.7E-16 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 Pfam PF08447 PAS fold 292 374 9.2E-18 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 Gene3D G3DSA:3.30.450.20 557 630 1.1E-13 T 15-10-2018 THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 Gene3D G3DSA:3.30.450.20 685 796 4.0E-21 T 15-10-2018 THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SUPERFAMILY SSF55785 419 545 6.28E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SMART SM00086 636 678 1.2E-5 T 15-10-2018 IPR001610 PAC motif THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SMART SM00086 509 549 170.0 T 15-10-2018 IPR001610 PAC motif THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SMART SM00086 339 381 8.5E-7 T 15-10-2018 IPR001610 PAC motif THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SMART SM00086 758 798 30.0 T 15-10-2018 IPR001610 PAC motif THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SUPERFAMILY SSF55785 572 680 6.81E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SUPERFAMILY SSF55785 272 383 4.71E-25 T 15-10-2018 IPR035965 PAS domain superfamily THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 Pfam PF13426 PAS domain 701 796 3.5E-10 T 15-10-2018 IPR000014 PAS domain THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 Pfam PF13426 PAS domain 442 545 6.3E-9 T 15-10-2018 IPR000014 PAS domain THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SUPERFAMILY SSF55785 675 795 5.58E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SMART SM00091 432 498 9.6E-8 T 15-10-2018 IPR000014 PAS domain THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SMART SM00091 267 333 1.5E-8 T 15-10-2018 IPR000014 PAS domain THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SMART SM00091 690 755 2.9E-7 T 15-10-2018 IPR000014 PAS domain THII_3417 7ec23f318b3970f63d0eac20f20f3d8e 824 SMART SM00091 561 629 5.5 T 15-10-2018 IPR000014 PAS domain THII_0878 123734ea7c9b0724ccf9a1ba0cd426b1 127 Gene3D G3DSA:3.40.50.12740 4 127 2.5E-44 T 15-10-2018 THII_0878 123734ea7c9b0724ccf9a1ba0cd426b1 127 SUPERFAMILY SSF52172 4 123 2.7E-40 T 15-10-2018 IPR011006 CheY-like superfamily THII_0878 123734ea7c9b0724ccf9a1ba0cd426b1 127 Pfam PF00072 Response regulator receiver domain 7 118 1.1E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0878 123734ea7c9b0724ccf9a1ba0cd426b1 127 SMART SM00448 5 118 1.3E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2609 91c69c829105bdb18979456a92e060ae 622 Gene3D G3DSA:2.30.42.20 437 615 5.2E-59 T 15-10-2018 THII_2609 91c69c829105bdb18979456a92e060ae 622 SUPERFAMILY SSF54211 209 336 4.55E-37 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_2609 91c69c829105bdb18979456a92e060ae 622 SUPERFAMILY SSF55874 9 205 3.41E-52 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2609 91c69c829105bdb18979456a92e060ae 622 Gene3D G3DSA:3.30.1370.100 478 573 5.2E-59 T 15-10-2018 THII_2609 91c69c829105bdb18979456a92e060ae 622 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 8 316 2.0E-94 T 15-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 THII_2609 91c69c829105bdb18979456a92e060ae 622 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 131 1.6E-11 T 15-10-2018 THII_2609 91c69c829105bdb18979456a92e060ae 622 Pfam PF08676 MutL C terminal dimerisation domain 431 578 2.5E-48 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 THII_2609 91c69c829105bdb18979456a92e060ae 622 SMART SM00853 435 578 8.8E-51 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 THII_2609 91c69c829105bdb18979456a92e060ae 622 SUPERFAMILY SSF118116 431 620 6.41E-59 T 15-10-2018 IPR037198 MutL, C-terminal domain superfamily THII_2609 91c69c829105bdb18979456a92e060ae 622 Gene3D G3DSA:3.30.230.10 223 335 8.6E-38 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_2609 91c69c829105bdb18979456a92e060ae 622 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 7 618 28.195 T 15-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 THII_2609 91c69c829105bdb18979456a92e060ae 622 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 99 105 - T 15-10-2018 IPR014762 DNA mismatch repair, conserved site THII_2609 91c69c829105bdb18979456a92e060ae 622 Gene3D G3DSA:3.30.565.10 8 222 3.1E-67 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2609 91c69c829105bdb18979456a92e060ae 622 SMART SM01340 218 336 3.3E-54 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 THII_2609 91c69c829105bdb18979456a92e060ae 622 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 221 335 6.7E-39 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Pfam PF00989 PAS fold 251 365 8.7E-11 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Gene3D G3DSA:2.10.70.100 707 751 1.8E-12 T 15-10-2018 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SMART SM00388 773 839 5.5E-26 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Pfam PF00512 His Kinase A (phospho-acceptor) domain 773 839 1.2E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SUPERFAMILY SSF55785 621 751 4.19E-18 T 15-10-2018 IPR035965 PAS domain superfamily THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Pfam PF13185 GAF domain 85 229 1.0E-14 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SUPERFAMILY SSF52172 1022 1161 6.4E-33 T 15-10-2018 IPR011006 CheY-like superfamily THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SUPERFAMILY SSF55785 365 489 2.42E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Gene3D G3DSA:3.30.450.20 238 384 1.1E-23 T 15-10-2018 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Gene3D G3DSA:1.10.287.130 752 837 8.6E-31 T 15-10-2018 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SMART SM00065 80 240 0.0045 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 PRINTS PR00344 Bacterial sensor protein C-terminal signature 982 995 1.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 PRINTS PR00344 Bacterial sensor protein C-terminal signature 958 976 1.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 PRINTS PR00344 Bacterial sensor protein C-terminal signature 925 939 1.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 PRINTS PR00344 Bacterial sensor protein C-terminal signature 943 953 1.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SUPERFAMILY SSF55785 237 365 5.06E-19 T 15-10-2018 IPR035965 PAS domain superfamily THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Pfam PF00072 Response regulator receiver domain 1025 1136 1.6E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Pfam PF08447 PAS fold 661 737 5.3E-16 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Pfam PF08448 PAS fold 516 626 8.6E-15 T 15-10-2018 IPR013656 PAS fold-4 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Pfam PF08448 PAS fold 392 500 1.5E-8 T 15-10-2018 IPR013656 PAS fold-4 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Gene3D G3DSA:3.30.450.20 509 635 1.0E-22 T 15-10-2018 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SMART SM00448 1023 1136 6.9E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SUPERFAMILY SSF55781 48 225 2.7E-12 T 15-10-2018 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Gene3D G3DSA:3.40.50.12740 1022 1207 2.4E-35 T 15-10-2018 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SUPERFAMILY SSF55874 828 998 1.27E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SUPERFAMILY SSF55785 495 622 4.51E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Gene3D G3DSA:3.30.565.10 838 1000 4.7E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SMART SM00086 710 753 6.6E-6 T 15-10-2018 IPR001610 PAC motif THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SMART SM00086 456 498 0.2 T 15-10-2018 IPR001610 PAC motif THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SMART SM00086 328 369 31.0 T 15-10-2018 IPR001610 PAC motif THII_2528 b647c803b39ea83c7720a633078e53f4 1225 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 633 760 3.7E-8 T 15-10-2018 IPR000014 PAS domain THII_2528 b647c803b39ea83c7720a633078e53f4 1225 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 380 505 2.9E-16 T 15-10-2018 IPR000014 PAS domain THII_2528 b647c803b39ea83c7720a633078e53f4 1225 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 506 631 1.3E-9 T 15-10-2018 IPR000014 PAS domain THII_2528 b647c803b39ea83c7720a633078e53f4 1225 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 246 376 5.5E-16 T 15-10-2018 IPR000014 PAS domain THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Gene3D G3DSA:3.30.450.20 636 705 1.5E-11 T 15-10-2018 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Gene3D G3DSA:3.30.450.20 392 508 8.7E-23 T 15-10-2018 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 890 997 5.1E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2528 b647c803b39ea83c7720a633078e53f4 1225 Gene3D G3DSA:3.30.450.40 84 237 2.1E-11 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SUPERFAMILY SSF47384 758 840 1.12E-24 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SMART SM00387 889 998 1.4E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SMART SM00091 636 704 0.35 T 15-10-2018 IPR000014 PAS domain THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SMART SM00091 381 448 1.5E-6 T 15-10-2018 IPR000014 PAS domain THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SMART SM00091 250 316 5.6E-8 T 15-10-2018 IPR000014 PAS domain THII_2528 b647c803b39ea83c7720a633078e53f4 1225 SMART SM00091 510 577 17.0 T 15-10-2018 IPR000014 PAS domain THII_1921 c3e847deb65a9bd895120c024c29337e 217 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 68 88 2.7E-61 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_1921 c3e847deb65a9bd895120c024c29337e 217 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 89 109 2.7E-61 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_1921 c3e847deb65a9bd895120c024c29337e 217 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 30 50 2.7E-61 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_1921 c3e847deb65a9bd895120c024c29337e 217 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 172 196 2.7E-61 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_1921 c3e847deb65a9bd895120c024c29337e 217 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 13 30 2.7E-61 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_1921 c3e847deb65a9bd895120c024c29337e 217 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 124 150 2.7E-61 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_1921 c3e847deb65a9bd895120c024c29337e 217 Pfam PF01578 Cytochrome C assembly protein 13 152 5.9E-32 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 THII_1921 c3e847deb65a9bd895120c024c29337e 217 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 13 196 1.8E-84 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_1714 cb0212b76be190f690672c5cdf74be2b 408 SUPERFAMILY SSF53756 4 400 2.9E-52 T 15-10-2018 THII_1714 cb0212b76be190f690672c5cdf74be2b 408 Gene3D G3DSA:3.40.50.2000 1 213 1.7E-17 T 15-10-2018 THII_1714 cb0212b76be190f690672c5cdf74be2b 408 Gene3D G3DSA:3.40.50.2000 214 385 6.2E-28 T 15-10-2018 THII_1714 cb0212b76be190f690672c5cdf74be2b 408 Pfam PF00534 Glycosyl transferases group 1 216 382 2.8E-19 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_1714 cb0212b76be190f690672c5cdf74be2b 408 Pfam PF13579 Glycosyl transferase 4-like domain 18 203 1.3E-20 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 THII_2290 3256cdd5dc0d2203725800f6c309d561 195 SMART SM00287 121 189 1.7E-5 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type THII_2290 3256cdd5dc0d2203725800f6c309d561 195 SMART SM00287 43 111 0.25 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type THII_2290 3256cdd5dc0d2203725800f6c309d561 195 Gene3D G3DSA:2.30.30.40 121 193 1.0E-10 T 15-10-2018 THII_2290 3256cdd5dc0d2203725800f6c309d561 195 Gene3D G3DSA:2.30.30.40 44 111 5.6E-7 T 15-10-2018 THII_2290 3256cdd5dc0d2203725800f6c309d561 195 Pfam PF08239 Bacterial SH3 domain 53 104 1.5E-6 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type THII_1586 ddb07d62763c810e3a21a100501df553 301 SUPERFAMILY SSF50965 22 204 2.09E-5 T 15-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller THII_3961 94da5647bcd05adf4c71c2c181ae99a9 112 Gene3D G3DSA:3.40.190.10 48 86 1.9E-12 T 15-10-2018 THII_3961 94da5647bcd05adf4c71c2c181ae99a9 112 Gene3D G3DSA:3.40.190.10 4 47 1.9E-12 T 15-10-2018 THII_3961 94da5647bcd05adf4c71c2c181ae99a9 112 SUPERFAMILY SSF53850 2 84 3.8E-9 T 15-10-2018 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.2E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.2E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.2E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.2E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.2E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 Gene3D G3DSA:3.30.70.870 440 490 5.3E-26 T 15-10-2018 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 SMART SM00889 487 605 2.1E-77 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 SUPERFAMILY SSF54980 610 697 2.81E-29 T 15-10-2018 IPR035647 EF-G domain III/V-like THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 SUPERFAMILY SSF54211 486 605 1.9E-47 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 Pfam PF14492 Elongation Factor G, domain II 411 484 5.1E-34 T 15-10-2018 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.5E-16 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 Gene3D G3DSA:2.40.30.10 297 423 2.3E-48 T 15-10-2018 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 699 0.0 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 Pfam PF03764 Elongation factor G, domain IV 486 604 1.3E-49 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 Gene3D G3DSA:3.30.230.10 491 694 1.9E-93 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 113.459 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 Pfam PF00679 Elongation factor G C-terminus 608 692 8.4E-30 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 Gene3D G3DSA:3.30.70.240 611 681 1.9E-93 T 15-10-2018 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 7.6E-33 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 SMART SM00838 607 694 7.8E-55 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 Gene3D G3DSA:3.40.50.300 1 293 8.3E-116 T 15-10-2018 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 SUPERFAMILY SSF52540 6 288 2.13E-108 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 SUPERFAMILY SSF50447 271 411 3.06E-33 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.9E-66 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0315 691fa4e3cf8601915826f09ce2b0a0d9 700 SUPERFAMILY SSF54980 411 488 5.76E-25 T 15-10-2018 IPR035647 EF-G domain III/V-like THII_1190 e91df07f8dd474f429a7dac5a147e4c2 205 TIGRFAM TIGR02594 TIGR02594: TIGR02594 family protein 69 195 9.6E-41 T 15-10-2018 IPR013423 Conserved hypothetical protein CHP02594 THII_1190 e91df07f8dd474f429a7dac5a147e4c2 205 Gene3D G3DSA:3.10.350.10 1 62 1.7E-13 T 15-10-2018 IPR036779 LysM domain superfamily THII_1190 e91df07f8dd474f429a7dac5a147e4c2 205 Gene3D G3DSA:3.90.1720.10 86 194 2.7E-6 T 15-10-2018 THII_1190 e91df07f8dd474f429a7dac5a147e4c2 205 Pfam PF01476 LysM domain 4 48 6.6E-9 T 15-10-2018 IPR018392 LysM domain THII_1190 e91df07f8dd474f429a7dac5a147e4c2 205 SUPERFAMILY SSF54001 112 186 1.67E-5 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily THII_1190 e91df07f8dd474f429a7dac5a147e4c2 205 SMART SM00257 3 48 6.1E-9 T 15-10-2018 IPR018392 LysM domain THII_1190 e91df07f8dd474f429a7dac5a147e4c2 205 SUPERFAMILY SSF54106 2 48 2.75E-10 T 15-10-2018 THII_2813 1680be259425487bb8b04a7d407f3e85 104 Gene3D G3DSA:3.10.20.280 1 91 2.2E-31 T 15-10-2018 IPR037021 RnfH superfamily THII_2813 1680be259425487bb8b04a7d407f3e85 104 SUPERFAMILY SSF54285 6 81 3.53E-24 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THII_2813 1680be259425487bb8b04a7d407f3e85 104 Pfam PF03658 RnfH family Ubiquitin 8 89 2.3E-32 T 15-10-2018 IPR005346 RnfH protein THII_2813 1680be259425487bb8b04a7d407f3e85 104 Hamap MF_00460 Protein RnfH [rnfH]. 7 97 22.476 T 15-10-2018 IPR005346 RnfH protein THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55785 760 889 3.84E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00387 1960 2070 2.1E-36 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00091 519 587 1.2E-6 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00091 1431 1496 7.2E-7 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00091 1302 1370 1.3E-6 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00091 1709 1777 0.026 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00091 648 714 2.8E-10 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00091 401 458 58.0 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00091 921 988 0.032 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00091 775 842 8.0 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00091 1175 1241 5.4E-10 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00091 1049 1113 0.034 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00091 1558 1625 1.9E-6 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55785 386 505 3.84E-9 T 15-10-2018 IPR035965 PAS domain superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55785 909 1035 8.2E-23 T 15-10-2018 IPR035965 PAS domain superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.20 907 1048 1.5E-27 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.20 773 903 2.8E-25 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.20 386 517 2.4E-11 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF13188 PAS domain 1432 1478 7.3E-6 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55785 1034 1161 4.54E-11 T 15-10-2018 IPR035965 PAS domain superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF08448 PAS fold 927 1038 6.9E-18 T 15-10-2018 IPR013656 PAS fold-4 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF08448 PAS fold 782 893 5.2E-20 T 15-10-2018 IPR013656 PAS fold-4 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.565.10 1914 2070 7.0E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF52172 2097 2224 6.83E-34 T 15-10-2018 IPR011006 CheY-like superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.20 646 772 3.7E-26 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00086 1125 1163 2.3 T 15-10-2018 IPR001610 PAC motif THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00086 721 763 1.6E-5 T 15-10-2018 IPR001610 PAC motif THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00086 1503 1543 8.2 T 15-10-2018 IPR001610 PAC motif THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00086 594 636 5.2E-7 T 15-10-2018 IPR001610 PAC motif THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00086 1632 1673 17.0 T 15-10-2018 IPR001610 PAC motif THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00086 1248 1290 1.3E-9 T 15-10-2018 IPR001610 PAC motif THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00086 1377 1419 3.2E-6 T 15-10-2018 IPR001610 PAC motif THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00086 1783 1827 37.0 T 15-10-2018 IPR001610 PAC motif THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00086 995 1037 7.2E-4 T 15-10-2018 IPR001610 PAC motif THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00086 849 891 0.25 T 15-10-2018 IPR001610 PAC motif THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF13426 PAS domain 1066 1162 8.8E-5 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF13426 PAS domain 1571 1672 1.5E-10 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF13426 PAS domain 1186 1289 1.9E-15 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55785 1160 1288 4.05E-28 T 15-10-2018 IPR035965 PAS domain superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1847 1913 1.1E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF03924 CHASE domain 74 266 2.5E-30 T 15-10-2018 IPR006189 CHASE domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.20 1705 1830 1.8E-12 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:2.10.70.100 1375 1418 7.6E-9 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:2.10.70.100 592 638 3.0E-10 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00388 1847 1913 1.2E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF08447 PAS fold 1325 1413 4.6E-20 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF08447 PAS fold 542 629 2.3E-23 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF08447 PAS fold 672 754 6.9E-13 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:1.10.287.130 1833 1913 1.4E-28 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF00072 Response regulator receiver domain 2101 2211 6.8E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.40.50.12740 2098 2302 2.0E-33 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM01079 70 268 4.5E-25 T 15-10-2018 IPR006189 CHASE domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55785 1714 1830 2.44E-11 T 15-10-2018 IPR035965 PAS domain superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.20 1555 1688 2.7E-22 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.20 1175 1302 9.8E-29 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.20 1049 1174 1.7E-11 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1996 2010 1.1E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2054 2067 1.1E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2014 2024 1.1E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2030 2048 1.1E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55785 1572 1682 3.49E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.350 74 286 3.1E-27 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55785 527 639 4.51E-25 T 15-10-2018 IPR035965 PAS domain superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF47384 1832 1914 7.85E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55785 1417 1541 8.38E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55785 633 761 6.93E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.20 518 586 2.1E-21 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.20 1303 1369 7.6E-20 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55874 1902 2066 3.93E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1961 2068 1.6E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SMART SM00448 2099 2212 7.9E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1706 1831 3.1E-8 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1427 1550 6.4E-16 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1556 1680 2.1E-20 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 645 770 4.9E-24 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1298 1426 4.4E-14 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1171 1297 1.2E-25 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 515 643 8.2E-15 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 771 895 1.2E-12 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 918 1044 6.9E-15 T 15-10-2018 IPR000014 PAS domain THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 Gene3D G3DSA:3.30.450.20 1419 1541 1.3E-21 T 15-10-2018 THII_1395 84abece7467ed6a43d5bef5555d408ac 2313 SUPERFAMILY SSF55785 1287 1417 5.58E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_3895 f66c9128f1bcfe3a5f578f00badc8d44 154 Pfam PF00583 Acetyltransferase (GNAT) family 22 127 2.3E-16 T 15-10-2018 IPR000182 GNAT domain THII_3895 f66c9128f1bcfe3a5f578f00badc8d44 154 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 18 149 3.0E-38 T 15-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 THII_3895 f66c9128f1bcfe3a5f578f00badc8d44 154 Gene3D G3DSA:3.40.630.30 9 154 1.6E-42 T 15-10-2018 THII_3895 f66c9128f1bcfe3a5f578f00badc8d44 154 SUPERFAMILY SSF55729 9 150 1.03E-33 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_0748 3e95d97959ca04f41606cda29e81a67d 527 Pfam PF00009 Elongation factor Tu GTP binding domain 11 275 1.9E-49 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 SUPERFAMILY SSF50447 259 391 4.71E-30 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_0748 3e95d97959ca04f41606cda29e81a67d 527 PRINTS PR00315 GTP-binding elongation factor signature 13 26 2.5E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.5E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.5E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.5E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.5E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 SUPERFAMILY SSF54980 391 466 1.4E-15 T 15-10-2018 IPR035647 EF-G domain III/V-like THII_0748 3e95d97959ca04f41606cda29e81a67d 527 Pfam PF03144 Elongation factor Tu domain 2 312 378 4.4E-9 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 1.7E-42 T 15-10-2018 IPR032090 Peptide chain release factor 3, C-terminal THII_0748 3e95d97959ca04f41606cda29e81a67d 527 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 153 1.3E-19 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 526 3.3E-259 T 15-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 Gene3D G3DSA:3.40.50.300 12 376 4.0E-110 T 15-10-2018 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 SUPERFAMILY SSF52540 8 275 9.29E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0748 3e95d97959ca04f41606cda29e81a67d 527 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site THII_0748 3e95d97959ca04f41606cda29e81a67d 527 Gene3D G3DSA:3.40.50.300 19 273 4.0E-110 T 15-10-2018 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 52.093 T 15-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 THII_0748 3e95d97959ca04f41606cda29e81a67d 527 Gene3D G3DSA:3.30.70.3280 388 527 8.6E-49 T 15-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily THII_2498 a0bbce0bc339d0cfdf2852b930e9a238 442 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 73 232 8.3E-15 T 15-10-2018 THII_2498 a0bbce0bc339d0cfdf2852b930e9a238 442 Gene3D G3DSA:2.60.120.200 24 235 3.0E-24 T 15-10-2018 THII_2498 a0bbce0bc339d0cfdf2852b930e9a238 442 Pfam PF02412 Thrombospondin type 3 repeat 304 338 3.0E-9 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_2498 a0bbce0bc339d0cfdf2852b930e9a238 442 Pfam PF02412 Thrombospondin type 3 repeat 244 266 3.5E-6 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_2498 a0bbce0bc339d0cfdf2852b930e9a238 442 Pfam PF02412 Thrombospondin type 3 repeat 268 302 5.9E-12 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_2498 a0bbce0bc339d0cfdf2852b930e9a238 442 Pfam PF02412 Thrombospondin type 3 repeat 340 370 9.7E-6 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_2498 a0bbce0bc339d0cfdf2852b930e9a238 442 SUPERFAMILY SSF103647 284 369 4.38E-22 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_2498 a0bbce0bc339d0cfdf2852b930e9a238 442 SUPERFAMILY SSF49899 19 238 4.5E-26 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily THII_2498 a0bbce0bc339d0cfdf2852b930e9a238 442 Gene3D G3DSA:4.10.1080.10 236 328 3.8E-27 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_0547 5d6d740fdb3bfe794fa4f9789b66e963 134 SUPERFAMILY SSF88723 2 125 3.64E-20 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_0547 5d6d740fdb3bfe794fa4f9789b66e963 134 Pfam PF01850 PIN domain 5 124 3.9E-15 T 15-10-2018 IPR002716 PIN domain THII_0547 5d6d740fdb3bfe794fa4f9789b66e963 134 Gene3D G3DSA:3.40.50.1010 4 133 9.1E-15 T 15-10-2018 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SUPERFAMILY SSF141072 1662 1774 3.01E-23 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SUPERFAMILY SSF49265 1049 1156 2.52E-5 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SUPERFAMILY SSF49313 462 547 7.53E-9 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Gene3D G3DSA:2.60.40.10 1032 1158 9.6E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SUPERFAMILY SSF141072 1782 1895 7.98E-25 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Pfam PF01650 Peptidase C13 family 735 880 2.0E-6 T 15-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Pfam PF03160 Calx-beta domain 1534 1626 6.6E-14 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Pfam PF03160 Calx-beta domain 1658 1739 7.9E-10 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Pfam PF03160 Calx-beta domain 1778 1871 9.0E-14 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Pfam PF03160 Calx-beta domain 1384 1471 3.5E-6 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Pfam PF03160 Calx-beta domain 1264 1352 1.1E-12 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Gene3D G3DSA:2.60.40.2030 1263 1376 3.4E-23 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Gene3D G3DSA:2.60.40.2030 1663 1773 1.3E-22 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Gene3D G3DSA:2.60.40.2030 1382 1494 2.2E-17 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Gene3D G3DSA:2.60.40.2030 1530 1662 1.6E-25 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SUPERFAMILY SSF141072 1263 1377 4.45E-25 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SMART SM00237 1526 1627 2.9E-21 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SMART SM00237 1367 1472 4.4E-6 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SMART SM00237 1253 1353 4.4E-11 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SMART SM00237 1764 1871 8.2E-22 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SMART SM00237 1651 1748 1.0E-6 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SUPERFAMILY SSF141072 1383 1495 1.57E-21 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Gene3D G3DSA:2.130.10.10 2 133 1.8E-12 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Gene3D G3DSA:2.130.10.10 134 232 2.2E-5 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Pfam PF05345 Putative Ig domain 404 443 1.9E-5 T 15-10-2018 IPR008009 Putative Ig THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Pfam PF05345 Putative Ig domain 493 531 4.5E-5 T 15-10-2018 IPR008009 Putative Ig THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SUPERFAMILY SSF50969 31 222 4.71E-15 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SUPERFAMILY SSF49313 364 461 1.02E-12 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Gene3D G3DSA:2.60.40.2030 1782 1909 1.1E-25 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Gene3D G3DSA:2.60.40.10 363 458 6.0E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Gene3D G3DSA:2.60.40.10 459 547 1.5E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 Pfam PF10282 Lactonase, 7-bladed beta-propeller 4 128 6.4E-6 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_1506 e1ba89fb7da8d1757144173c6dd845d9 2074 SUPERFAMILY SSF141072 1537 1651 4.84E-29 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_3504 a6071871350e92849162cceed7811fa2 1382 Gene3D G3DSA:2.130.10.10 1133 1263 1.3E-52 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Gene3D G3DSA:2.130.10.10 1007 1132 5.0E-35 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Gene3D G3DSA:2.130.10.10 877 1006 5.1E-42 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 941 955 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3504 a6071871350e92849162cceed7811fa2 1382 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1070 1084 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3504 a6071871350e92849162cceed7811fa2 1382 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1156 1170 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3504 a6071871350e92849162cceed7811fa2 1382 Gene3D G3DSA:2.130.10.10 675 875 3.6E-35 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 744 783 0.077 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 1048 1083 0.0045 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 915 954 9.3E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 1259 1298 4.2E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 787 826 5.8E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 872 911 4.2E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 1173 1212 1.2E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 1216 1255 2.2E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 1301 1340 3.9E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 1001 1040 0.001 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 1130 1169 1.9E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 829 868 7.0E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 1086 1126 9.6E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 SMART SM00320 958 997 3.2E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF07676 WD40-like Beta Propeller Repeat 758 773 0.086 T 15-10-2018 IPR011659 WD40-like Beta Propeller THII_3504 a6071871350e92849162cceed7811fa2 1382 PRINTS PR00320 G protein beta WD-40 repeat signature 1113 1127 2.8E-8 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_3504 a6071871350e92849162cceed7811fa2 1382 PRINTS PR00320 G protein beta WD-40 repeat signature 813 827 2.8E-8 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_3504 a6071871350e92849162cceed7811fa2 1382 PRINTS PR00320 G protein beta WD-40 repeat signature 1242 1256 2.8E-8 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_3504 a6071871350e92849162cceed7811fa2 1382 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 898 912 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3504 a6071871350e92849162cceed7811fa2 1382 Gene3D G3DSA:2.130.10.10 1264 1350 9.6E-28 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1327 1341 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3504 a6071871350e92849162cceed7811fa2 1382 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 813 827 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3504 a6071871350e92849162cceed7811fa2 1382 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 984 998 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3504 a6071871350e92849162cceed7811fa2 1382 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1113 1127 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3504 a6071871350e92849162cceed7811fa2 1382 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1242 1256 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3504 a6071871350e92849162cceed7811fa2 1382 SUPERFAMILY SSF50978 752 1046 5.72E-74 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1285 1299 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3504 a6071871350e92849162cceed7811fa2 1382 SUPERFAMILY SSF52540 224 412 4.66E-9 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3504 a6071871350e92849162cceed7811fa2 1382 SUPERFAMILY SSF50978 1051 1339 5.5E-91 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1027 1041 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 921 953 0.01 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 1094 1126 2.2E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 1179 1211 1.3E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 1136 1169 5.2E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 1304 1339 6.6E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 1058 1083 0.0012 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 839 867 9.5E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 1222 1255 1.5E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 795 826 1.5E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 965 997 5.4E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 1265 1298 1.4E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3504 a6071871350e92849162cceed7811fa2 1382 Pfam PF00400 WD domain, G-beta repeat 873 910 2.7E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1444 325c54d4addd8f71b607bf1b3686a6c4 424 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 209 219 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 THII_1444 325c54d4addd8f71b607bf1b3686a6c4 424 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 111 119 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 THII_1444 325c54d4addd8f71b607bf1b3686a6c4 424 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 15 417 51.497 T 15-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 THII_1444 325c54d4addd8f71b607bf1b3686a6c4 424 SUPERFAMILY SSF51161 304 409 6.1E-18 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_1444 325c54d4addd8f71b607bf1b3686a6c4 424 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 24 43 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 THII_1444 325c54d4addd8f71b607bf1b3686a6c4 424 SUPERFAMILY SSF53448 15 377 1.41E-80 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1444 325c54d4addd8f71b607bf1b3686a6c4 424 Pfam PF00483 Nucleotidyl transferase 20 284 8.8E-69 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 THII_1444 325c54d4addd8f71b607bf1b3686a6c4 424 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 18 391 2.5E-158 T 15-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 THII_1444 325c54d4addd8f71b607bf1b3686a6c4 424 Gene3D G3DSA:3.90.550.10 8 294 1.1E-88 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1444 325c54d4addd8f71b607bf1b3686a6c4 424 Gene3D G3DSA:2.160.10.10 295 423 2.0E-37 T 15-10-2018 THII_2065 83469b39a51364ff2144c5a38f8318af 180 PRINTS PR00449 Transforming protein P21 ras signature 5 26 1.9E-5 T 15-10-2018 THII_2065 83469b39a51364ff2144c5a38f8318af 180 PRINTS PR00449 Transforming protein P21 ras signature 57 79 1.9E-5 T 15-10-2018 THII_2065 83469b39a51364ff2144c5a38f8318af 180 PRINTS PR00449 Transforming protein P21 ras signature 153 175 1.9E-5 T 15-10-2018 THII_2065 83469b39a51364ff2144c5a38f8318af 180 SUPERFAMILY SSF52540 2 174 9.16E-20 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2065 83469b39a51364ff2144c5a38f8318af 180 Gene3D G3DSA:3.40.50.300 2 176 3.9E-20 T 15-10-2018 THII_2065 83469b39a51364ff2144c5a38f8318af 180 Pfam PF03029 Conserved hypothetical ATP binding protein 26 167 4.9E-9 T 15-10-2018 IPR004130 GPN-loop GTPase THII_3532 c1736db7b43f0b268440cb78a9f7f946 318 SUPERFAMILY SSF53807 54 318 1.49E-44 T 15-10-2018 THII_3532 c1736db7b43f0b268440cb78a9f7f946 318 Gene3D G3DSA:3.40.50.1980 52 184 6.6E-22 T 15-10-2018 THII_3532 c1736db7b43f0b268440cb78a9f7f946 318 Gene3D G3DSA:3.40.50.1980 185 318 7.5E-23 T 15-10-2018 THII_3532 c1736db7b43f0b268440cb78a9f7f946 318 Pfam PF01497 Periplasmic binding protein 67 297 1.6E-30 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain THII_0853 a50211b2d39065fde66097f83d928e26 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 128 139 8.7E-8 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 THII_0853 a50211b2d39065fde66097f83d928e26 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 174 186 8.7E-8 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 THII_0853 a50211b2d39065fde66097f83d928e26 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 161 173 8.7E-8 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 THII_0853 a50211b2d39065fde66097f83d928e26 210 Gene3D G3DSA:1.20.5.510 10 49 1.0E-6 T 15-10-2018 THII_0853 a50211b2d39065fde66097f83d928e26 210 SUPERFAMILY SSF50022 39 201 3.2E-42 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 THII_0853 a50211b2d39065fde66097f83d928e26 210 Pfam PF00355 Rieske [2Fe-2S] domain 64 187 2.9E-11 T 15-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 THII_0853 a50211b2d39065fde66097f83d928e26 210 Gene3D G3DSA:2.102.10.10 52 202 2.4E-50 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 THII_0853 a50211b2d39065fde66097f83d928e26 210 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 13 49 7.2E-15 T 15-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 THII_0853 a50211b2d39065fde66097f83d928e26 210 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 18 202 1.1E-74 T 15-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 526 1.1E-18 T 15-10-2018 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 569 588 1.1E-18 T 15-10-2018 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 369 383 1.1E-18 T 15-10-2018 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 228 242 1.1E-18 T 15-10-2018 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 592 604 1.1E-18 T 15-10-2018 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 Gene3D G3DSA:3.40.1110.10 380 501 8.0E-76 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 Gene3D G3DSA:3.40.50.1000 350 617 8.0E-76 T 15-10-2018 IPR023214 HAD superfamily THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 163 648 1.7E-115 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 365 582 2.5E-36 T 15-10-2018 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 SUPERFAMILY SSF56784 367 660 9.35E-38 T 15-10-2018 IPR036412 HAD-like superfamily THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 Gene3D G3DSA:2.70.150.20 174 282 4.8E-25 T 15-10-2018 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 SUPERFAMILY SSF81653 181 274 5.75E-23 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 371 377 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 ProSitePatterns PS01229 Hypothetical cof family signature 2. 569 591 - T 15-10-2018 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 168 643 1.7E-60 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 THII_2244 aee05da4bceb37b84bf35848dc7edc87 682 Pfam PF00122 E1-E2 ATPase 181 321 3.1E-30 T 15-10-2018 THII_3814 cf14d61bdd530bc12e38e0f0c471c79e 608 Gene3D G3DSA:2.60.120.10 5 142 2.3E-16 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_3814 cf14d61bdd530bc12e38e0f0c471c79e 608 Pfam PF00571 CBS domain 213 267 2.2E-4 T 15-10-2018 IPR000644 CBS domain THII_3814 cf14d61bdd530bc12e38e0f0c471c79e 608 Pfam PF00027 Cyclic nucleotide-binding domain 34 113 6.4E-9 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_3814 cf14d61bdd530bc12e38e0f0c471c79e 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 461 602 1.2E-48 T 15-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding THII_3814 cf14d61bdd530bc12e38e0f0c471c79e 608 SUPERFAMILY SSF54631 146 267 1.1E-20 T 15-10-2018 THII_3814 cf14d61bdd530bc12e38e0f0c471c79e 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 292 421 4.7E-40 T 15-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 THII_3814 cf14d61bdd530bc12e38e0f0c471c79e 608 SUPERFAMILY SSF51206 9 136 3.93E-20 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like THII_3814 cf14d61bdd530bc12e38e0f0c471c79e 608 Gene3D G3DSA:3.10.580.10 143 301 5.8E-22 T 15-10-2018 THII_2061 1217560d5d12422eabfb004b58cb79f5 413 Pfam PF00149 Calcineurin-like phosphoesterase 1 196 8.8E-13 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 THII_2061 1217560d5d12422eabfb004b58cb79f5 413 SUPERFAMILY SSF56300 1 268 4.27E-47 T 15-10-2018 THII_2061 1217560d5d12422eabfb004b58cb79f5 413 PIRSF PIRSF033091 1 412 2.0E-105 T 15-10-2018 IPR014576 Predicted phosphoesterase, YhaO type THII_2061 1217560d5d12422eabfb004b58cb79f5 413 Gene3D G3DSA:3.60.21.10 1 244 1.1E-49 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like THII_1972 d4682dd2d1ce6d027fb8a72f3b66a4f3 85 PRINTS PR00160 Glutaredoxin signature 46 59 1.2E-15 T 15-10-2018 IPR014025 Glutaredoxin subgroup THII_1972 d4682dd2d1ce6d027fb8a72f3b66a4f3 85 PRINTS PR00160 Glutaredoxin signature 4 22 1.2E-15 T 15-10-2018 IPR014025 Glutaredoxin subgroup THII_1972 d4682dd2d1ce6d027fb8a72f3b66a4f3 85 PRINTS PR00160 Glutaredoxin signature 60 73 1.2E-15 T 15-10-2018 IPR014025 Glutaredoxin subgroup THII_1972 d4682dd2d1ce6d027fb8a72f3b66a4f3 85 Pfam PF00462 Glutaredoxin 5 63 2.2E-18 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 THII_1972 d4682dd2d1ce6d027fb8a72f3b66a4f3 85 SUPERFAMILY SSF52833 4 83 6.34E-25 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_1972 d4682dd2d1ce6d027fb8a72f3b66a4f3 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 1.3E-32 T 15-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 THII_1972 d4682dd2d1ce6d027fb8a72f3b66a4f3 85 Gene3D G3DSA:3.40.30.10 3 85 5.7E-25 T 15-10-2018 THII_1972 d4682dd2d1ce6d027fb8a72f3b66a4f3 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 THII_3583 0c392047d91d98c8caade5778900995a 414 SUPERFAMILY SSF53901 3 252 7.49E-80 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_3583 0c392047d91d98c8caade5778900995a 414 SUPERFAMILY SSF53901 214 413 1.9E-69 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_3583 0c392047d91d98c8caade5778900995a 414 Gene3D G3DSA:3.40.47.10 257 402 2.9E-53 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_3583 0c392047d91d98c8caade5778900995a 414 SMART SM00825 Beta-ketoacyl synthase 6 413 5.8E-15 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_3583 0c392047d91d98c8caade5778900995a 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.3E-61 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_3583 0c392047d91d98c8caade5778900995a 414 Gene3D G3DSA:3.40.47.10 1 255 7.6E-92 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_3583 0c392047d91d98c8caade5778900995a 414 PIRSF PIRSF000447 1 414 3.2E-189 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 THII_3583 0c392047d91d98c8caade5778900995a 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site THII_3583 0c392047d91d98c8caade5778900995a 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 5.7E-37 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_3583 0c392047d91d98c8caade5778900995a 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 9.5E-198 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 THII_2172 6cb9572cd5e99a809a2fe70d23bd59a9 220 Gene3D G3DSA:3.40.50.150 4 214 4.9E-48 T 15-10-2018 THII_2172 6cb9572cd5e99a809a2fe70d23bd59a9 220 SUPERFAMILY SSF53335 5 179 9.58E-43 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2172 6cb9572cd5e99a809a2fe70d23bd59a9 220 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 13 198 5.9E-36 T 15-10-2018 THII_1530 0cbd3b417e43a431bb343c2538fa2f03 136 Pfam PF03061 Thioesterase superfamily 19 104 1.9E-18 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 THII_1530 0cbd3b417e43a431bb343c2538fa2f03 136 Gene3D G3DSA:3.10.129.10 1 135 1.0E-39 T 15-10-2018 THII_1530 0cbd3b417e43a431bb343c2538fa2f03 136 PIRSF PIRSF003230 1 136 4.9E-43 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 THII_1530 0cbd3b417e43a431bb343c2538fa2f03 136 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 5 128 1.4E-47 T 15-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 THII_1530 0cbd3b417e43a431bb343c2538fa2f03 136 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 117 6.5E-33 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 THII_1530 0cbd3b417e43a431bb343c2538fa2f03 136 SUPERFAMILY SSF54637 1 133 3.45E-41 T 15-10-2018 IPR029069 HotDog domain superfamily THII_1530 0cbd3b417e43a431bb343c2538fa2f03 136 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 10 27 - T 15-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 THII_1696 7c6171b82509991002e995953fc5df57 370 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 5 352 2.4E-155 T 15-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 THII_1696 7c6171b82509991002e995953fc5df57 370 Pfam PF16363 GDP-mannose 4,6 dehydratase 12 323 3.6E-36 T 15-10-2018 IPR016040 NAD(P)-binding domain THII_1696 7c6171b82509991002e995953fc5df57 370 Gene3D G3DSA:3.90.25.10 193 357 1.8E-67 T 15-10-2018 THII_1696 7c6171b82509991002e995953fc5df57 370 Gene3D G3DSA:3.40.50.720 1 192 4.9E-50 T 15-10-2018 THII_1696 7c6171b82509991002e995953fc5df57 370 SUPERFAMILY SSF51735 4 344 6.62E-71 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2729 543b154c1f71dd27398161949e51e6f9 174 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 15-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_2729 543b154c1f71dd27398161949e51e6f9 174 Pfam PF00466 Ribosomal protein L10 5 101 1.0E-27 T 15-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 THII_2729 543b154c1f71dd27398161949e51e6f9 174 Gene3D G3DSA:3.30.70.1730 1 126 3.0E-33 T 15-10-2018 THII_2729 543b154c1f71dd27398161949e51e6f9 174 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 26.122 T 15-10-2018 IPR022973 Ribosomal protein L10 THII_2729 543b154c1f71dd27398161949e51e6f9 174 SUPERFAMILY SSF160369 4 171 5.1E-52 T 15-10-2018 THII_3772 17d9320c4ceaae602321c45105bdcd9f 78 Pfam PF04255 Protein of unknown function (DUF433) 6 61 9.1E-24 T 15-10-2018 IPR007367 Protein of unknown function DUF433 THII_3772 17d9320c4ceaae602321c45105bdcd9f 78 Gene3D G3DSA:1.10.10.10 6 71 1.4E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3772 17d9320c4ceaae602321c45105bdcd9f 78 SUPERFAMILY SSF46689 3 71 3.76E-21 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 SUPERFAMILY SSF52949 1 184 1.47E-48 T 15-10-2018 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 496 39.508 T 15-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 8.9E-35 T 15-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 Gene3D G3DSA:3.40.630.10 181 496 4.9E-139 T 15-10-2018 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 487 6.8E-126 T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 SUPERFAMILY SSF53187 180 496 7.53E-124 T 15-10-2018 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 2.9E-55 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 2.9E-55 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 2.9E-55 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 2.9E-55 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 2.9E-55 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 THII_1306 a3d33f0bbc44f2836961f5311698c716 520 Gene3D G3DSA:3.40.220.10 1 159 7.8E-56 T 15-10-2018 THII_3433 05b255fb90d9b9d27986c7ef1df1248d 123 TIGRFAM TIGR00494 crcB: protein CrcB 6 117 6.8E-30 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 THII_3433 05b255fb90d9b9d27986c7ef1df1248d 123 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 5.9E-24 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 THII_3433 05b255fb90d9b9d27986c7ef1df1248d 123 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 121 19.118 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 THII_3435 05b255fb90d9b9d27986c7ef1df1248d 123 TIGRFAM TIGR00494 crcB: protein CrcB 6 117 6.8E-30 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 THII_3435 05b255fb90d9b9d27986c7ef1df1248d 123 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 5.9E-24 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 THII_3435 05b255fb90d9b9d27986c7ef1df1248d 123 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 121 19.118 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 THII_0958 2e3455d0aec9ad6513a60cfda0e9b1b0 195 Pfam PF05685 Putative restriction endonuclease 31 190 7.1E-31 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0958 2e3455d0aec9ad6513a60cfda0e9b1b0 195 Gene3D G3DSA:3.90.1570.10 22 194 2.8E-45 T 15-10-2018 THII_0958 2e3455d0aec9ad6513a60cfda0e9b1b0 195 SUPERFAMILY SSF52980 21 194 1.02E-38 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2848 baeb7322bb3b3b2821fe5056532b57dd 301 Gene3D G3DSA:3.40.190.290 91 300 2.2E-50 T 15-10-2018 THII_2848 baeb7322bb3b3b2821fe5056532b57dd 301 SUPERFAMILY SSF46785 4 110 4.54E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_2848 baeb7322bb3b3b2821fe5056532b57dd 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.4E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_2848 baeb7322bb3b3b2821fe5056532b57dd 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.5E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_2848 baeb7322bb3b3b2821fe5056532b57dd 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.5E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_2848 baeb7322bb3b3b2821fe5056532b57dd 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.5E-10 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_2848 baeb7322bb3b3b2821fe5056532b57dd 301 Pfam PF03466 LysR substrate binding domain 88 293 6.1E-48 T 15-10-2018 IPR005119 LysR, substrate-binding THII_2848 baeb7322bb3b3b2821fe5056532b57dd 301 SUPERFAMILY SSF53850 86 296 1.09E-46 T 15-10-2018 THII_2848 baeb7322bb3b3b2821fe5056532b57dd 301 Gene3D G3DSA:1.10.10.10 1 90 6.1E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 Gene3D G3DSA:2.60.34.10 386 527 6.4E-48 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 SUPERFAMILY SSF53067 203 384 4.71E-48 T 15-10-2018 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 207 220 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 Gene3D G3DSA:3.90.640.10 240 318 1.2E-111 T 15-10-2018 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 Pfam PF00012 Hsp70 protein 22 608 1.1E-185 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 SUPERFAMILY SSF53067 19 199 1.64E-50 T 15-10-2018 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 624 43.65 T 15-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 Gene3D G3DSA:3.30.420.40 196 368 1.2E-111 T 15-10-2018 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 PRINTS PR00301 70kDa heat shock protein signature 473 489 2.2E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 PRINTS PR00301 70kDa heat shock protein signature 392 411 2.2E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 PRINTS PR00301 70kDa heat shock protein signature 154 174 2.2E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.2E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 PRINTS PR00301 70kDa heat shock protein signature 213 223 2.2E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 PRINTS PR00301 70kDa heat shock protein signature 336 352 2.2E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.2E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 PRINTS PR00301 70kDa heat shock protein signature 367 387 2.2E-56 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 Gene3D G3DSA:3.30.420.40 23 381 1.2E-111 T 15-10-2018 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 SUPERFAMILY SSF100920 391 543 4.71E-50 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 623 5.1E-272 T 15-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 Gene3D G3DSA:1.20.1270.10 528 623 1.4E-26 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 SUPERFAMILY SSF100934 511 623 2.55E-33 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 THII_2630 5f8ae0cb6275010b72834d4c98c41647 630 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 339 353 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 Pfam PF00873 AcrB/AcrD/AcrF family 5 1007 2.9E-256 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-58 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.1E-58 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 PRINTS PR00702 Acriflavin resistance protein family signature 608 622 1.1E-58 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.1E-58 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-58 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.1E-58 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.1E-58 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.1E-58 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 1.1E-58 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 Gene3D G3DSA:3.30.70.1430 40 800 1.5E-298 T 15-10-2018 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 Gene3D G3DSA:3.30.70.1320 134 325 1.5E-298 T 15-10-2018 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 Gene3D G3DSA:3.30.2090.10 701 792 1.5E-298 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 SUPERFAMILY SSF82693 136 322 9.94E-20 T 15-10-2018 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 Gene3D G3DSA:3.30.70.1440 651 847 1.5E-298 T 15-10-2018 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 Gene3D G3DSA:1.20.1640.10 10 502 1.5E-298 T 15-10-2018 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 SUPERFAMILY SSF82693 555 655 2.09E-19 T 15-10-2018 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 Gene3D G3DSA:1.20.1640.10 503 1004 1.5E-298 T 15-10-2018 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 SUPERFAMILY SSF82714 182 264 2.35E-11 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 Gene3D G3DSA:3.30.70.1430 557 650 1.5E-298 T 15-10-2018 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 SUPERFAMILY SSF82866 288 491 3.92E-45 T 15-10-2018 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 Gene3D G3DSA:3.30.2090.10 177 267 1.5E-298 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 SUPERFAMILY SSF82693 40 133 6.8E-22 T 15-10-2018 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 SUPERFAMILY SSF82866 790 1008 4.05E-43 T 15-10-2018 THII_3229 5c89d7f205fef8e2832162e5b2c7cd6a 1019 SUPERFAMILY SSF82714 702 790 4.45E-14 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_2703 af15b73d55f9e7f40ff909b50264b6c3 264 Pfam PF06051 Domain of Unknown Function (DUF928) 68 260 2.8E-34 T 15-10-2018 IPR010328 Protein of unknown function DUF928 THII_0067 3f959e96275b8c08cb598c48d5e1d726 210 Pfam PF00929 Exonuclease 20 194 6.6E-30 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_0067 3f959e96275b8c08cb598c48d5e1d726 210 Gene3D G3DSA:3.30.420.10 8 205 2.0E-49 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 THII_0067 3f959e96275b8c08cb598c48d5e1d726 210 Hamap MF_00157 Ribonuclease T [rnt]. 1 210 91.871 T 15-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 THII_0067 3f959e96275b8c08cb598c48d5e1d726 210 SUPERFAMILY SSF53098 10 202 2.14E-52 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_0067 3f959e96275b8c08cb598c48d5e1d726 210 TIGRFAM TIGR01298 RNaseT: ribonuclease T 11 203 8.0E-93 T 15-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 THII_0067 3f959e96275b8c08cb598c48d5e1d726 210 SMART SM00479 18 203 3.8E-22 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_1935 b11722facc759a11544e9fab16791a7f 684 Pfam PF13641 Glycosyltransferase like family 2 25 257 2.9E-20 T 15-10-2018 THII_1935 b11722facc759a11544e9fab16791a7f 684 Gene3D G3DSA:3.40.50.2000 500 670 5.0E-23 T 15-10-2018 THII_1935 b11722facc759a11544e9fab16791a7f 684 Gene3D G3DSA:3.90.550.10 15 261 1.4E-45 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1935 b11722facc759a11544e9fab16791a7f 684 SUPERFAMILY SSF53448 23 256 8.04E-44 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1935 b11722facc759a11544e9fab16791a7f 684 SUPERFAMILY SSF53756 317 682 1.94E-28 T 15-10-2018 THII_1935 b11722facc759a11544e9fab16791a7f 684 Pfam PF00534 Glycosyl transferases group 1 577 657 1.4E-9 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_1239 f20a8086a468b5505b1cc2e974ee3e67 252 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 6 248 40.287 T 15-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB THII_1239 f20a8086a468b5505b1cc2e974ee3e67 252 Gene3D G3DSA:3.30.1330.30 1 80 1.6E-21 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like THII_1239 f20a8086a468b5505b1cc2e974ee3e67 252 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 9 79 4.3E-19 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 THII_1239 f20a8086a468b5505b1cc2e974ee3e67 252 SUPERFAMILY SSF75217 92 248 2.75E-51 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases THII_1239 f20a8086a468b5505b1cc2e974ee3e67 252 SMART SM00967 8 84 3.5E-16 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 THII_1239 f20a8086a468b5505b1cc2e974ee3e67 252 Pfam PF00588 SpoU rRNA Methylase family 101 241 1.0E-39 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 THII_1239 f20a8086a468b5505b1cc2e974ee3e67 252 SUPERFAMILY SSF55315 4 78 2.94E-17 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like THII_1239 f20a8086a468b5505b1cc2e974ee3e67 252 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 7 247 2.4E-73 T 15-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 THII_1239 f20a8086a468b5505b1cc2e974ee3e67 252 Gene3D G3DSA:3.40.1280.10 84 248 1.7E-59 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THII_2317 9a7848a8acd358ae2ddab122651279ae 229 SUPERFAMILY SSF52980 8 148 2.04E-18 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2317 9a7848a8acd358ae2ddab122651279ae 229 Pfam PF05685 Putative restriction endonuclease 8 167 2.2E-19 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2317 9a7848a8acd358ae2ddab122651279ae 229 Gene3D G3DSA:3.90.1570.10 19 165 4.2E-7 T 15-10-2018 THII_1071 5597746995a9fc9e223095b42494d37c 361 Pfam PF13439 Glycosyltransferase Family 4 47 170 1.3E-17 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 THII_1071 5597746995a9fc9e223095b42494d37c 361 Pfam PF00534 Glycosyl transferases group 1 174 335 3.8E-39 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_1071 5597746995a9fc9e223095b42494d37c 361 SUPERFAMILY SSF53756 3 353 8.52E-76 T 15-10-2018 THII_1071 5597746995a9fc9e223095b42494d37c 361 Gene3D G3DSA:3.40.50.2000 180 339 3.8E-43 T 15-10-2018 THII_1071 5597746995a9fc9e223095b42494d37c 361 Gene3D G3DSA:3.40.50.2000 1 179 9.8E-24 T 15-10-2018 THII_3601 140425b44c41f774a166564aecd21453 389 SUPERFAMILY SSF46689 276 360 6.57E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3601 140425b44c41f774a166564aecd21453 389 Pfam PF01710 Transposase 278 388 1.8E-19 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_3601 140425b44c41f774a166564aecd21453 389 Pfam PF11187 Protein of unknown function (DUF2974) 146 226 1.1E-9 T 15-10-2018 IPR024499 Protein of unknown function DUF2974 THII_3601 140425b44c41f774a166564aecd21453 389 Gene3D G3DSA:3.40.50.1820 102 250 5.9E-12 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_3601 140425b44c41f774a166564aecd21453 389 SUPERFAMILY SSF53474 130 268 1.16E-22 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1181 7436a501dcf9a7527198b0f77b63f194 697 SUPERFAMILY SSF54211 5 146 5.57E-50 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Pfam PF00575 S1 RNA binding domain 623 693 1.3E-20 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 PIRSF PIRSF005499 3 697 6.7E-297 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 SUPERFAMILY SSF54211 304 495 3.44E-47 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_1181 7436a501dcf9a7527198b0f77b63f194 697 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 695 0.0 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Pfam PF00013 KH domain 559 615 3.8E-7 T 15-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Gene3D G3DSA:3.30.230.70 235 552 1.9E-115 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 SUPERFAMILY SSF54791 550 624 3.41E-15 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Pfam PF03725 3' exoribonuclease family, domain 2 462 531 2.8E-6 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Pfam PF03725 3' exoribonuclease family, domain 2 150 212 9.7E-13 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 SUPERFAMILY SSF55666 147 238 4.63E-29 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 SUPERFAMILY SSF50249 610 695 4.03E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Gene3D G3DSA:3.30.230.70 2 230 9.7E-82 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 323 1.0E-14 T 15-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 696 30.803 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 SUPERFAMILY SSF55666 453 552 1.82E-29 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 SMART SM00322 555 620 1.5E-9 T 15-10-2018 IPR004087 K Homology domain GO:0003676 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Pfam PF01138 3' exoribonuclease family, domain 1 17 146 5.6E-23 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Pfam PF01138 3' exoribonuclease family, domain 1 327 459 2.9E-22 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Gene3D G3DSA:3.30.1370.10 553 624 7.2E-17 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 SMART SM00316 623 693 1.1E-26 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 SUPERFAMILY SSF46915 231 329 4.84E-17 T 15-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 THII_1181 7436a501dcf9a7527198b0f77b63f194 697 Gene3D G3DSA:2.40.50.140 625 697 6.9E-31 T 15-10-2018 THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 SUPERFAMILY SSF52172 138 275 5.41E-23 T 15-10-2018 IPR011006 CheY-like superfamily THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 Gene3D G3DSA:3.30.70.270 276 445 7.7E-33 T 15-10-2018 THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 286 442 3.3E-25 T 15-10-2018 IPR000160 GGDEF domain THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 SMART SM00267 277 442 7.2E-23 T 15-10-2018 IPR000160 GGDEF domain THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 SUPERFAMILY SSF55073 293 443 2.67E-27 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 Pfam PF00990 Diguanylate cyclase, GGDEF domain 288 438 6.3E-22 T 15-10-2018 IPR000160 GGDEF domain THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 SMART SM00448 10 125 3.1E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 SMART SM00448 137 264 7.8E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 Gene3D G3DSA:3.40.50.2300 1 134 5.8E-27 T 15-10-2018 THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 Gene3D G3DSA:3.40.50.2300 136 275 2.1E-23 T 15-10-2018 THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 SUPERFAMILY SSF52172 11 132 4.98E-26 T 15-10-2018 IPR011006 CheY-like superfamily THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 Pfam PF00072 Response regulator receiver domain 12 125 8.6E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3857 4d55df6ab5261fa490dd725091c3d5b7 446 Pfam PF00072 Response regulator receiver domain 139 265 1.9E-16 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1740 923738a5e368e4f030fbb0aca7b9e7b0 443 SMART SM00228 213 282 0.13 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_1740 923738a5e368e4f030fbb0aca7b9e7b0 443 SMART SM00228 118 185 0.0012 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_1740 923738a5e368e4f030fbb0aca7b9e7b0 443 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 442 1.4E-119 T 15-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 THII_1740 923738a5e368e4f030fbb0aca7b9e7b0 443 Pfam PF02163 Peptidase family M50 9 429 5.3E-78 T 15-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 THII_1740 923738a5e368e4f030fbb0aca7b9e7b0 443 SUPERFAMILY SSF50156 89 169 3.15E-15 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 THII_1740 923738a5e368e4f030fbb0aca7b9e7b0 443 Gene3D G3DSA:2.30.42.10 127 222 3.9E-16 T 15-10-2018 THII_1740 923738a5e368e4f030fbb0aca7b9e7b0 443 SUPERFAMILY SSF50156 224 290 5.39E-13 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 THII_1740 923738a5e368e4f030fbb0aca7b9e7b0 443 Gene3D G3DSA:2.30.42.10 224 304 1.1E-16 T 15-10-2018 THII_3607 8879c8728b7031acfef0e514b3155cd1 196 Pfam PF11563 Protoglobin 3 151 5.1E-16 T 15-10-2018 THII_3607 8879c8728b7031acfef0e514b3155cd1 196 Gene3D G3DSA:1.10.490.10 3 156 1.4E-20 T 15-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 THII_3607 8879c8728b7031acfef0e514b3155cd1 196 SUPERFAMILY SSF46458 4 145 1.54E-15 T 15-10-2018 IPR009050 Globin-like superfamily THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 Gene3D G3DSA:1.20.1640.10 10 499 9.9E-276 T 15-10-2018 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 Gene3D G3DSA:3.30.70.1320 134 324 9.9E-276 T 15-10-2018 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 SUPERFAMILY SSF82714 698 786 6.02E-10 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 SUPERFAMILY SSF82714 182 263 3.4E-10 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 SUPERFAMILY SSF82693 40 132 1.96E-20 T 15-10-2018 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 SUPERFAMILY SSF82693 139 312 2.72E-13 T 15-10-2018 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 SUPERFAMILY SSF82866 289 488 6.41E-46 T 15-10-2018 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 SUPERFAMILY SSF82693 546 648 5.23E-9 T 15-10-2018 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 SUPERFAMILY SSF82866 785 1006 5.62E-43 T 15-10-2018 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 Gene3D G3DSA:3.30.70.1440 650 844 9.9E-276 T 15-10-2018 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 Gene3D G3DSA:1.20.1640.10 500 1002 9.9E-276 T 15-10-2018 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 Gene3D G3DSA:3.30.2090.10 178 268 9.9E-276 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 Gene3D G3DSA:3.30.70.1430 40 795 9.9E-276 T 15-10-2018 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.5E-54 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 5.5E-54 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 5.5E-54 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 5.5E-54 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.5E-54 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 5.5E-54 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 5.5E-54 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 PRINTS PR00702 Acriflavin resistance protein family signature 532 549 5.5E-54 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 Gene3D G3DSA:3.30.70.1430 547 649 9.9E-276 T 15-10-2018 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 Pfam PF00873 AcrB/AcrD/AcrF family 5 1005 1.4E-224 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0627 ce793a28b974e95fcec7c53cc4701389 1027 Gene3D G3DSA:3.30.2090.10 697 787 9.9E-276 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_3596 09046d9d23e70f412b4d6b82b85f3099 304 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 290 1.3E-106 T 15-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 THII_3596 09046d9d23e70f412b4d6b82b85f3099 304 SUPERFAMILY SSF51735 4 164 1.18E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3596 09046d9d23e70f412b4d6b82b85f3099 304 SUPERFAMILY SSF48179 164 289 4.53E-34 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 THII_3596 09046d9d23e70f412b4d6b82b85f3099 304 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 15-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 THII_3596 09046d9d23e70f412b4d6b82b85f3099 304 Gene3D G3DSA:3.40.50.720 2 164 5.2E-55 T 15-10-2018 THII_3596 09046d9d23e70f412b4d6b82b85f3099 304 Gene3D G3DSA:1.10.1040.10 165 292 4.3E-34 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 THII_3596 09046d9d23e70f412b4d6b82b85f3099 304 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 1.4E-32 T 15-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 THII_3596 09046d9d23e70f412b4d6b82b85f3099 304 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 5.1E-50 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 THII_3596 09046d9d23e70f412b4d6b82b85f3099 304 PIRSF PIRSF000103 1 292 1.1E-76 T 15-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 THII_3596 09046d9d23e70f412b4d6b82b85f3099 304 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 114 139 7.2E-11 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_3596 09046d9d23e70f412b4d6b82b85f3099 304 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 7.2E-11 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_1810 9f2352f168b66dd2815c0235e351a587 67 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_1810 9f2352f168b66dd2815c0235e351a587 67 Gene3D G3DSA:3.30.70.20 2 67 1.4E-18 T 15-10-2018 THII_1810 9f2352f168b66dd2815c0235e351a587 67 Pfam PF00037 4Fe-4S binding domain 4 22 5.9E-6 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_1810 9f2352f168b66dd2815c0235e351a587 67 SUPERFAMILY SSF54862 4 58 3.97E-13 T 15-10-2018 THII_0943 668825edae037404e32d628ffbe42a3c 212 Gene3D G3DSA:3.40.50.12740 4 210 6.5E-58 T 15-10-2018 THII_0943 668825edae037404e32d628ffbe42a3c 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 204 1.7E-17 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 THII_0943 668825edae037404e32d628ffbe42a3c 212 SUPERFAMILY SSF52172 4 135 8.97E-31 T 15-10-2018 IPR011006 CheY-like superfamily THII_0943 668825edae037404e32d628ffbe42a3c 212 SUPERFAMILY SSF46894 143 210 3.74E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 THII_0943 668825edae037404e32d628ffbe42a3c 212 Pfam PF00072 Response regulator receiver domain 6 117 4.9E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0943 668825edae037404e32d628ffbe42a3c 212 SMART SM00421 147 204 2.9E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 THII_0943 668825edae037404e32d628ffbe42a3c 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 THII_0943 668825edae037404e32d628ffbe42a3c 212 SMART SM00448 4 117 3.3E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0943 668825edae037404e32d628ffbe42a3c 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 THII_0943 668825edae037404e32d628ffbe42a3c 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 THII_0943 668825edae037404e32d628ffbe42a3c 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 THII_2713 3718927ec099f46740ad3f6606b6c6af 290 Gene3D G3DSA:2.60.200.30 127 263 2.4E-91 T 15-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 THII_2713 3718927ec099f46740ad3f6606b6c6af 290 Pfam PF01513 ATP-NAD kinase 4 265 1.1E-59 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 THII_2713 3718927ec099f46740ad3f6606b6c6af 290 Hamap MF_00361 NAD kinase [nadK]. 3 286 31.708 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 THII_2713 3718927ec099f46740ad3f6606b6c6af 290 Gene3D G3DSA:3.40.50.10330 21 286 2.4E-91 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 THII_2713 3718927ec099f46740ad3f6606b6c6af 290 SUPERFAMILY SSF111331 4 287 2.75E-85 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily THII_3106 f7a7a57a752d8e9cec54f34b79bd4ddf 638 Gene3D G3DSA:3.90.700.10 277 407 9.9E-277 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_3106 f7a7a57a752d8e9cec54f34b79bd4ddf 638 SUPERFAMILY SSF46977 499 631 5.89E-40 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_3106 f7a7a57a752d8e9cec54f34b79bd4ddf 638 PIRSF PIRSF000171 6 637 2.0E-253 T 15-10-2018 THII_3106 f7a7a57a752d8e9cec54f34b79bd4ddf 638 SUPERFAMILY SSF51905 10 484 4.0E-60 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3106 f7a7a57a752d8e9cec54f34b79bd4ddf 638 TIGRFAM TIGR02061 aprA: adenylylsulfate reductase, alpha subunit 17 632 2.4E-284 T 15-10-2018 IPR011803 Adenylylsulphate reductase, alpha subunit KEGG: 00920+1.8.99.2|MetaCyc: PWY-5278|MetaCyc: PWY-5279 THII_3106 f7a7a57a752d8e9cec54f34b79bd4ddf 638 SUPERFAMILY SSF56425 252 397 4.18E-66 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_3106 f7a7a57a752d8e9cec54f34b79bd4ddf 638 Pfam PF00890 FAD binding domain 17 440 5.1E-11 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_3106 f7a7a57a752d8e9cec54f34b79bd4ddf 638 Gene3D G3DSA:3.50.50.90 15 629 9.9E-277 T 15-10-2018 THII_3106 f7a7a57a752d8e9cec54f34b79bd4ddf 638 Pfam PF02910 Fumarate reductase flavoprotein C-term 513 638 6.6E-5 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_2949 5d8f1c8ad83fad9e79155d70a3d9b312 195 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 160 5.8E-39 T 15-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2949 5d8f1c8ad83fad9e79155d70a3d9b312 195 Gene3D G3DSA:1.20.120.1200 2 162 4.6E-45 T 15-10-2018 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 SUPERFAMILY SSF56655 6 264 1.11E-78 T 15-10-2018 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 Gene3D G3DSA:3.40.190.80 157 262 9.2E-34 T 15-10-2018 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 Pfam PF00459 Inositol monophosphatase family 9 252 3.0E-50 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 Gene3D G3DSA:3.30.540.10 6 153 1.2E-48 T 15-10-2018 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 1.3E-12 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 1.3E-12 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 214 238 1.3E-12 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 1.3E-12 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 256 3.4E-95 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 259 42.199 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 217 231 - T 15-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 THII_1634 ab16d3c90145c8938e22a237f20c1516 276 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 88 101 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site THII_0262 f3b900492e087e8387148e0851178f1b 188 Gene3D G3DSA:3.90.950.10 1 187 6.6E-67 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like THII_0262 f3b900492e087e8387148e0851178f1b 188 Hamap MF_00528 Septum formation protein Maf [maf]. 1 187 31.646 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 THII_0262 f3b900492e087e8387148e0851178f1b 188 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 180 1.3E-55 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 THII_0262 f3b900492e087e8387148e0851178f1b 188 PIRSF PIRSF006305 1 188 3.4E-51 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 THII_0262 f3b900492e087e8387148e0851178f1b 188 Pfam PF02545 Maf-like protein 2 182 1.7E-56 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 THII_0262 f3b900492e087e8387148e0851178f1b 188 SUPERFAMILY SSF52972 1 182 5.69E-59 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like THII_1326 3cbf9556d0cd814f1138fe9907da1395 373 Pfam PF02563 Polysaccharide biosynthesis/export protein 59 131 2.9E-17 T 15-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 THII_1326 3cbf9556d0cd814f1138fe9907da1395 373 Gene3D G3DSA:3.10.560.10 228 312 1.1E-19 T 15-10-2018 THII_1326 3cbf9556d0cd814f1138fe9907da1395 373 Gene3D G3DSA:3.10.560.10 132 227 6.4E-13 T 15-10-2018 THII_1326 3cbf9556d0cd814f1138fe9907da1395 373 Pfam PF10531 SLBB domain 232 279 2.3E-12 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1326 3cbf9556d0cd814f1138fe9907da1395 373 Gene3D G3DSA:3.30.1950.10 66 131 5.4E-10 T 15-10-2018 THII_3125 50630bbb607dabdb022f71c4f11e95a1 202 Pfam PF04891 NifQ 41 199 1.2E-56 T 15-10-2018 IPR006975 NifQ GO:0009399|GO:0030151 THII_0701 f77fbc21d3f0c575910872f0168879d9 225 Pfam PF03379 CcmB protein 11 222 1.6E-79 T 15-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_0701 f77fbc21d3f0c575910872f0168879d9 225 PIRSF PIRSF002764 5 225 1.4E-79 T 15-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria THII_0701 f77fbc21d3f0c575910872f0168879d9 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 106 124 8.1E-62 T 15-10-2018 THII_0701 f77fbc21d3f0c575910872f0168879d9 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 198 221 8.1E-62 T 15-10-2018 THII_0701 f77fbc21d3f0c575910872f0168879d9 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 58 75 8.1E-62 T 15-10-2018 THII_0701 f77fbc21d3f0c575910872f0168879d9 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 81 104 8.1E-62 T 15-10-2018 THII_0701 f77fbc21d3f0c575910872f0168879d9 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 161 180 8.1E-62 T 15-10-2018 THII_0701 f77fbc21d3f0c575910872f0168879d9 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 32 53 8.1E-62 T 15-10-2018 THII_0701 f77fbc21d3f0c575910872f0168879d9 225 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 11 221 7.6E-81 T 15-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 918 16.17 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 SUPERFAMILY SSF46589 853 917 9.42E-15 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 SUPERFAMILY SSF52374 1 609 5.01E-132 T 15-10-2018 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 Gene3D G3DSA:3.40.50.620 331 548 4.5E-64 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 Gene3D G3DSA:3.40.50.620 2 194 7.0E-54 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 853 916 5.5E-17 T 15-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 SUPERFAMILY SSF47323 610 868 1.08E-69 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 SUPERFAMILY SSF50677 188 338 1.44E-61 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 Gene3D G3DSA:1.10.287.380 846 917 1.8E-20 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 599 1.7E-211 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 Gene3D G3DSA:3.90.740.10 195 330 4.0E-50 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 Gene3D G3DSA:1.10.730.10 566 786 7.4E-72 T 15-10-2018 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 899 0.0 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 Pfam PF08264 Anticodon-binding domain of tRNA 642 793 4.7E-41 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 PRINTS PR00986 Valyl-tRNA synthetase signature 443 464 9.9E-38 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 PRINTS PR00986 Valyl-tRNA synthetase signature 227 244 9.9E-38 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 PRINTS PR00986 Valyl-tRNA synthetase signature 474 492 9.9E-38 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 9.9E-38 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 PRINTS PR00986 Valyl-tRNA synthetase signature 343 356 9.9E-38 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 THII_2265 7d4a5a19e4908b5dc1b0dac652b3e457 920 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1205 f3eee2447ccffc528c60bfcfc3733278 356 Gene3D G3DSA:3.40.50.300 4 231 5.3E-59 T 15-10-2018 THII_1205 f3eee2447ccffc528c60bfcfc3733278 356 SMART SM00382 24 229 2.0E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1205 f3eee2447ccffc528c60bfcfc3733278 356 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 6 355 4.9E-135 T 15-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 THII_1205 f3eee2447ccffc528c60bfcfc3733278 356 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_1205 f3eee2447ccffc528c60bfcfc3733278 356 SUPERFAMILY SSF50331 239 355 5.76E-17 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal THII_1205 f3eee2447ccffc528c60bfcfc3733278 356 SUPERFAMILY SSF52540 6 224 1.3E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1205 f3eee2447ccffc528c60bfcfc3733278 356 Gene3D G3DSA:2.40.50.100 292 356 4.1E-12 T 15-10-2018 THII_1205 f3eee2447ccffc528c60bfcfc3733278 356 Pfam PF00005 ABC transporter 17 161 1.2E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_1205 f3eee2447ccffc528c60bfcfc3733278 356 Pfam PF03459 TOBE domain 294 355 4.4E-12 T 15-10-2018 IPR005116 Transport-associated OB, type 1 THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 42.11 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 9.6E-32 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 SMART SM01232 131 223 4.6E-40 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 Gene3D G3DSA:3.20.190.10 2 129 1.7E-39 T 15-10-2018 IPR035937 MutM-like, N-terminal THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 15-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 SUPERFAMILY SSF81624 2 136 1.96E-40 T 15-10-2018 IPR035937 MutM-like, N-terminal THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 2.0E-91 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 SUPERFAMILY SSF46946 132 224 5.0E-28 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 Pfam PF06827 Zinc finger found in FPG and IleRS 243 270 1.8E-7 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 SUPERFAMILY SSF57716 219 270 3.42E-15 T 15-10-2018 THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 SMART SM00898 2 116 2.1E-51 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 6.6E-25 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 THII_2806 b5b1eb42f2d74c8dde85587d12418627 271 Gene3D G3DSA:1.10.8.50 133 271 1.0E-42 T 15-10-2018 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 SMART SM00387 339 454 7.9E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1191 b360186b5c007f0a5e44e46124009bb9 723 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 453 1.8E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1191 b360186b5c007f0a5e44e46124009bb9 723 Gene3D G3DSA:3.40.50.12740 474 593 4.6E-34 T 15-10-2018 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 Gene3D G3DSA:3.40.50.12740 595 723 4.7E-31 T 15-10-2018 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 SUPERFAMILY SSF47384 209 295 8.83E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 293 4.1E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 Gene3D G3DSA:1.10.287.130 206 294 7.2E-27 T 15-10-2018 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 SUPERFAMILY SSF52172 474 588 7.26E-31 T 15-10-2018 IPR011006 CheY-like superfamily THII_1191 b360186b5c007f0a5e44e46124009bb9 723 Pfam PF00072 Response regulator receiver domain 477 585 1.0E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 Pfam PF00072 Response regulator receiver domain 597 710 1.3E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 SMART SM00448 475 585 2.5E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 SMART SM00448 595 710 2.2E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 SUPERFAMILY SSF52172 594 716 1.12E-29 T 15-10-2018 IPR011006 CheY-like superfamily THII_1191 b360186b5c007f0a5e44e46124009bb9 723 SMART SM00388 225 293 5.9E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 Gene3D G3DSA:3.30.565.10 295 458 3.4E-50 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1191 b360186b5c007f0a5e44e46124009bb9 723 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 1.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 451 1.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 1.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 1.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1191 b360186b5c007f0a5e44e46124009bb9 723 SUPERFAMILY SSF55874 282 452 1.15E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0955 ba5f1b3f19c9c4871f7fc2e807d868de 523 SMART SM00327 346 520 2.4E-19 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_0955 ba5f1b3f19c9c4871f7fc2e807d868de 523 Pfam PF00092 von Willebrand factor type A domain 348 505 9.2E-21 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_0955 ba5f1b3f19c9c4871f7fc2e807d868de 523 SUPERFAMILY SSF53300 344 516 5.98E-29 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_0955 ba5f1b3f19c9c4871f7fc2e807d868de 523 Pfam PF13531 Bacterial extracellular solute-binding protein 9 298 3.4E-28 T 15-10-2018 THII_0955 ba5f1b3f19c9c4871f7fc2e807d868de 523 Gene3D G3DSA:3.40.50.410 346 521 1.9E-34 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_0955 ba5f1b3f19c9c4871f7fc2e807d868de 523 Gene3D G3DSA:3.40.190.10 12 299 2.8E-9 T 15-10-2018 THII_0955 ba5f1b3f19c9c4871f7fc2e807d868de 523 SUPERFAMILY SSF53850 7 342 1.6E-17 T 15-10-2018 THII_0955 ba5f1b3f19c9c4871f7fc2e807d868de 523 Gene3D G3DSA:3.40.190.10 121 253 2.8E-9 T 15-10-2018 THII_1799 e64922195ebd42fd4613342d26195a4b 440 SMART SM00729 147 367 1.6E-57 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_1799 e64922195ebd42fd4613342d26195a4b 440 Gene3D G3DSA:3.40.50.12160 4 134 3.7E-33 T 15-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily THII_1799 e64922195ebd42fd4613342d26195a4b 440 Gene3D G3DSA:3.80.30.20 145 378 7.4E-82 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe THII_1799 e64922195ebd42fd4613342d26195a4b 440 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 71.959 T 15-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 THII_1799 e64922195ebd42fd4613342d26195a4b 440 Pfam PF04055 Radical SAM superfamily 153 325 1.8E-26 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_1799 e64922195ebd42fd4613342d26195a4b 440 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 8.2E-150 T 15-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 THII_1799 e64922195ebd42fd4613342d26195a4b 440 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 15-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 THII_1799 e64922195ebd42fd4613342d26195a4b 440 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.6E-28 T 15-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 THII_1799 e64922195ebd42fd4613342d26195a4b 440 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 5 440 1.2E-185 T 15-10-2018 THII_1799 e64922195ebd42fd4613342d26195a4b 440 Pfam PF01938 TRAM domain 379 440 5.7E-18 T 15-10-2018 IPR002792 TRAM domain THII_1799 e64922195ebd42fd4613342d26195a4b 440 SUPERFAMILY SSF102114 128 371 5.1E-60 T 15-10-2018 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SMART SM00387 583 701 1.5E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Pfam PF13188 PAS domain 331 374 3.3E-4 T 15-10-2018 IPR000014 PAS domain THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SUPERFAMILY SSF52172 725 847 3.27E-33 T 15-10-2018 IPR011006 CheY-like superfamily THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Gene3D G3DSA:3.30.450.20 149 282 7.7E-14 T 15-10-2018 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SMART SM00448 14 127 6.1E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SMART SM00448 726 839 3.3E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 536 1.2E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SUPERFAMILY SSF47384 457 537 8.24E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Gene3D G3DSA:3.30.450.20 315 447 5.8E-13 T 15-10-2018 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 165 285 1.6E-13 T 15-10-2018 IPR000014 PAS domain THII_3834 65b32558fa659aea6afaf061536f9a2e 952 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 327 456 2.3E-9 T 15-10-2018 IPR000014 PAS domain THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Gene3D G3DSA:3.30.565.10 535 702 2.7E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Pfam PF00989 PAS fold 167 218 1.8E-5 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SMART SM00388 471 536 2.0E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 584 697 5.7E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Gene3D G3DSA:3.40.50.12740 725 894 2.0E-33 T 15-10-2018 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SMART SM00091 166 232 2.9E-5 T 15-10-2018 IPR000014 PAS domain THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SMART SM00091 331 401 0.21 T 15-10-2018 IPR000014 PAS domain THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SUPERFAMILY SSF52172 14 150 5.41E-36 T 15-10-2018 IPR011006 CheY-like superfamily THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Gene3D G3DSA:1.10.287.130 448 534 6.1E-29 T 15-10-2018 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SUPERFAMILY SSF55785 151 278 9.33E-15 T 15-10-2018 IPR035965 PAS domain superfamily THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SUPERFAMILY SSF55874 525 703 4.32E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Pfam PF00072 Response regulator receiver domain 728 839 1.2E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Pfam PF00072 Response regulator receiver domain 16 127 1.3E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 Gene3D G3DSA:3.40.50.2300 13 148 1.9E-33 T 15-10-2018 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 SUPERFAMILY SSF55785 316 403 1.31E-13 T 15-10-2018 IPR035965 PAS domain superfamily THII_3834 65b32558fa659aea6afaf061536f9a2e 952 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 640 1.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 654 1.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 698 1.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3834 65b32558fa659aea6afaf061536f9a2e 952 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 679 1.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1013 7bc564fd853bc1580e334160682780df 163 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 10 148 1.2E-21 T 15-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein THII_1013 7bc564fd853bc1580e334160682780df 163 SUPERFAMILY SSF160719 67 126 9.81E-8 T 15-10-2018 THII_1013 7bc564fd853bc1580e334160682780df 163 Pfam PF04965 Gene 25-like lysozyme 42 136 1.5E-14 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 PRINTS PR00142 RecA protein signature 165 194 4.1E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 PRINTS PR00142 RecA protein signature 431 459 4.1E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 PRINTS PR00142 RecA protein signature 464 493 4.1E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 PRINTS PR00142 RecA protein signature 93 122 4.1E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 PRINTS PR00142 RecA protein signature 127 156 4.1E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 PRINTS PR00142 RecA protein signature 518 535 4.1E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 SUPERFAMILY SSF51294 203 423 1.57E-21 T 15-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 Gene3D G3DSA:3.40.50.300 34 228 2.0E-64 T 15-10-2018 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 ProSitePatterns PS00321 recA signature. 434 442 - T 15-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 Gene3D G3DSA:3.40.50.300 414 488 6.6E-14 T 15-10-2018 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 SUPERFAMILY SSF52540 9 205 4.51E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 SMART SM00382 57 215 1.9E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 Hamap MF_00268 Protein RecA [recA]. 5 550 44.093 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 404 425 4.4E-6 T 15-10-2018 IPR030934 Intein C-terminal splicing region THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 204 5.0E-105 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 SMART SM00306 202 306 7.8E-11 T 15-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 204 286 8.5E-8 T 15-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 SUPERFAMILY SSF52540 413 488 4.59E-7 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 Gene3D G3DSA:3.30.250.10 489 547 6.6E-24 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 Pfam PF00154 recA bacterial DNA recombination protein 421 489 5.5E-28 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 Pfam PF00154 recA bacterial DNA recombination protein 9 204 1.7E-102 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 SMART SM00305 382 430 8.2E-4 T 15-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_1413 fa3da5d82c67782dce1f6b8e97f10a69 564 SUPERFAMILY SSF54752 490 545 4.84E-19 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal THII_2364 d5fd8fa14ec2de0ea8c302603d0bcfeb 2048 Gene3D G3DSA:2.60.40.2030 1011 1134 2.8E-14 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2364 d5fd8fa14ec2de0ea8c302603d0bcfeb 2048 SUPERFAMILY SSF141072 1018 1122 1.05E-13 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2364 d5fd8fa14ec2de0ea8c302603d0bcfeb 2048 SUPERFAMILY SSF50969 1793 2017 3.61E-17 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like THII_2364 d5fd8fa14ec2de0ea8c302603d0bcfeb 2048 SMART SM00237 1007 1103 0.0056 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2364 d5fd8fa14ec2de0ea8c302603d0bcfeb 2048 Gene3D G3DSA:2.60.40.10 261 369 7.1E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2364 d5fd8fa14ec2de0ea8c302603d0bcfeb 2048 Gene3D G3DSA:2.60.40.10 147 252 1.7E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2364 d5fd8fa14ec2de0ea8c302603d0bcfeb 2048 Gene3D G3DSA:2.60.40.10 620 725 2.1E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2364 d5fd8fa14ec2de0ea8c302603d0bcfeb 2048 Gene3D G3DSA:2.60.40.10 735 841 9.8E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2364 d5fd8fa14ec2de0ea8c302603d0bcfeb 2048 Gene3D G3DSA:2.60.40.10 501 607 2.1E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2364 d5fd8fa14ec2de0ea8c302603d0bcfeb 2048 Gene3D G3DSA:2.60.40.10 376 476 6.2E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1543 2307f3f20649a3c399ce18e2f8470643 308 SUPERFAMILY SSF55120 65 298 6.17E-75 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1543 2307f3f20649a3c399ce18e2f8470643 308 Pfam PF01479 S4 domain 5 51 1.1E-6 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_1543 2307f3f20649a3c399ce18e2f8470643 308 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 2 298 1.1E-94 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1543 2307f3f20649a3c399ce18e2f8470643 308 Gene3D G3DSA:3.10.290.10 1 62 1.6E-15 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 THII_1543 2307f3f20649a3c399ce18e2f8470643 308 SMART SM00363 4 62 9.1E-4 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_1543 2307f3f20649a3c399ce18e2f8470643 308 Pfam PF00849 RNA pseudouridylate synthase 79 227 1.1E-32 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1543 2307f3f20649a3c399ce18e2f8470643 308 SUPERFAMILY SSF55174 4 54 8.41E-7 T 15-10-2018 THII_1543 2307f3f20649a3c399ce18e2f8470643 308 Gene3D G3DSA:3.30.2350.10 71 302 2.8E-71 T 15-10-2018 THII_1234 f3f4cf83e5fdadd6b3ce22746b348122 202 Gene3D G3DSA:3.40.50.150 1 191 5.1E-33 T 15-10-2018 THII_1234 f3f4cf83e5fdadd6b3ce22746b348122 202 Pfam PF13649 Methyltransferase domain 49 141 2.3E-16 T 15-10-2018 THII_1234 f3f4cf83e5fdadd6b3ce22746b348122 202 SUPERFAMILY SSF53335 9 179 2.28E-37 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 62 464 9.1E-138 T 15-10-2018 IPR010071 Amino acid adenylation domain THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1127 1524 1.8E-103 T 15-10-2018 IPR010071 Amino acid adenylation domain THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 15-10-2018 IPR020845 AMP-binding, conserved site THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Gene3D G3DSA:1.10.1200.10 538 618 1.1E-25 T 15-10-2018 IPR036736 ACP-like superfamily THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 SUPERFAMILY SSF52777 640 813 3.67E-45 T 15-10-2018 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Gene3D G3DSA:3.30.559.30 817 1062 2.5E-138 T 15-10-2018 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Gene3D G3DSA:3.40.50.1820 1602 1942 8.4E-56 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Gene3D G3DSA:3.40.50.980 63 198 1.0E-111 T 15-10-2018 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Pfam PF00975 Thioesterase domain 1745 1796 6.5E-9 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Pfam PF00501 AMP-binding enzyme 41 440 5.3E-104 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Pfam PF00501 AMP-binding enzyme 1106 1502 4.4E-82 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 SUPERFAMILY SSF52777 821 1066 2.45E-60 T 15-10-2018 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 SUPERFAMILY SSF56801 1054 1624 1.22E-131 T 15-10-2018 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 SUPERFAMILY SSF56801 12 561 3.01E-160 T 15-10-2018 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 SUPERFAMILY SSF53474 1676 1937 1.44E-21 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 SMART SM00823 Phosphopantetheine attachment site 1611 1680 1.1E-7 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 SMART SM00823 Phosphopantetheine attachment site 549 618 8.6E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Gene3D G3DSA:3.40.50.980 45 350 1.0E-111 T 15-10-2018 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 SUPERFAMILY SSF47336 1604 1676 1.01E-20 T 15-10-2018 IPR036736 ACP-like superfamily THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Gene3D G3DSA:3.40.50.12780 1092 1496 6.2E-103 T 15-10-2018 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Gene3D G3DSA:2.30.38.10 351 430 2.2E-31 T 15-10-2018 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 SUPERFAMILY SSF47336 542 614 2.36E-20 T 15-10-2018 IPR036736 ACP-like superfamily THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1247 1258 - T 15-10-2018 IPR020845 AMP-binding, conserved site THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Gene3D G3DSA:3.30.300.30 1497 1601 4.5E-31 T 15-10-2018 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Gene3D G3DSA:3.30.300.30 434 537 3.6E-35 T 15-10-2018 THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Pfam PF00668 Condensation domain 637 1077 8.4E-104 T 15-10-2018 IPR001242 Condensation domain THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Pfam PF00550 Phosphopantetheine attachment site 552 613 3.2E-15 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Pfam PF00550 Phosphopantetheine attachment site 1612 1675 4.1E-15 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 ProSitePatterns PS00012 Phosphopantetheine attachment site. 573 588 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 521 3.9E-12 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Pfam PF13193 AMP-binding enzyme C-terminal domain 1510 1587 4.6E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain THII_1050 4ca7689d9060843bbf29da43f77c0a21 1956 Gene3D G3DSA:3.30.559.10 640 1007 2.5E-138 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 THII_0770 14591b239c700ab9f76910d91f46c644 292 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 THII_0770 14591b239c700ab9f76910d91f46c644 292 PRINTS PR00478 Phosphoribulokinase family signature 126 144 6.2E-33 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 THII_0770 14591b239c700ab9f76910d91f46c644 292 PRINTS PR00478 Phosphoribulokinase family signature 164 181 6.2E-33 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 THII_0770 14591b239c700ab9f76910d91f46c644 292 PRINTS PR00478 Phosphoribulokinase family signature 182 205 6.2E-33 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 THII_0770 14591b239c700ab9f76910d91f46c644 292 PRINTS PR00478 Phosphoribulokinase family signature 12 29 6.2E-33 T 15-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 THII_0770 14591b239c700ab9f76910d91f46c644 292 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 4.2E-70 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 THII_0770 14591b239c700ab9f76910d91f46c644 292 SUPERFAMILY SSF52540 4 286 6.85E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0770 14591b239c700ab9f76910d91f46c644 292 Gene3D G3DSA:3.40.50.300 1 289 1.0E-120 T 15-10-2018 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 Gene3D G3DSA:3.30.565.10 264 418 1.3E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 Gene3D G3DSA:1.10.287.130 158 256 3.4E-15 T 15-10-2018 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 Gene3D G3DSA:3.40.50.2300 7 157 7.7E-41 T 15-10-2018 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 369 7.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 355 7.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 7.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 7.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 SMART SM00387 303 413 4.2E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 SUPERFAMILY SSF52172 9 159 3.42E-42 T 15-10-2018 IPR011006 CheY-like superfamily THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 SMART SM00388 189 259 2.1E-5 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 SUPERFAMILY SSF47384 176 255 4.9E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 Pfam PF00072 Response regulator receiver domain 11 121 5.4E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 411 1.4E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 Pfam PF00512 His Kinase A (phospho-acceptor) domain 190 254 4.1E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 SMART SM00448 8 121 3.3E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3467 aa6dd2594c1f48d954d0c35f963d6c0d 420 SUPERFAMILY SSF55874 283 410 8.91E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3099 837054eafcc6fa41e9657198d8103b50 727 SMART SM00955 270 596 8.0E-166 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 THII_3099 837054eafcc6fa41e9657198d8103b50 727 SUPERFAMILY SSF50249 197 643 2.29E-140 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_3099 837054eafcc6fa41e9657198d8103b50 727 SUPERFAMILY SSF50249 74 154 2.21E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_3099 837054eafcc6fa41e9657198d8103b50 727 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 76 726 8.1E-217 T 15-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 THII_3099 837054eafcc6fa41e9657198d8103b50 727 Pfam PF08206 Ribonuclease B OB domain 94 151 2.0E-18 T 15-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain THII_3099 837054eafcc6fa41e9657198d8103b50 727 Pfam PF00575 S1 RNA binding domain 642 724 2.3E-12 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_3099 837054eafcc6fa41e9657198d8103b50 727 Pfam PF08461 Ribonuclease R winged-helix domain 30 88 2.5E-7 T 15-10-2018 IPR013668 Ribonuclease R winged-helix domain THII_3099 837054eafcc6fa41e9657198d8103b50 727 ProSitePatterns PS01175 Ribonuclease II family signature. 563 587 - T 15-10-2018 IPR022966 Ribonuclease II/R, conserved site THII_3099 837054eafcc6fa41e9657198d8103b50 727 SUPERFAMILY SSF50249 646 725 4.1E-20 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_3099 837054eafcc6fa41e9657198d8103b50 727 Pfam PF00773 RNB domain 270 595 2.4E-104 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 THII_3099 837054eafcc6fa41e9657198d8103b50 727 Hamap MF_01895 Ribonuclease R [rnr]. 45 726 56.112 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 THII_3099 837054eafcc6fa41e9657198d8103b50 727 Gene3D G3DSA:2.40.50.140 647 727 7.2E-21 T 15-10-2018 THII_3099 837054eafcc6fa41e9657198d8103b50 727 SMART SM00316 643 726 1.4E-13 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_3099 837054eafcc6fa41e9657198d8103b50 727 SMART SM00316 87 149 31.0 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_3099 837054eafcc6fa41e9657198d8103b50 727 TIGRFAM TIGR02063 RNase_R: ribonuclease R 26 726 2.1E-257 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 THII_3099 837054eafcc6fa41e9657198d8103b50 727 Gene3D G3DSA:2.40.50.140 77 154 1.8E-16 T 15-10-2018 THII_3099 837054eafcc6fa41e9657198d8103b50 727 SMART SM00357 93 152 3.8E-10 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 THII_2473 15f3254574fa97ff0887780337bc82d4 339 SUPERFAMILY SSF103486 4 327 2.88E-34 T 15-10-2018 IPR036079 V-type ATP synthase subunit C-like Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_2473 15f3254574fa97ff0887780337bc82d4 339 Gene3D G3DSA:1.20.1690.10 190 292 2.0E-29 T 15-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_2473 15f3254574fa97ff0887780337bc82d4 339 Gene3D G3DSA:1.20.1690.10 75 189 2.0E-29 T 15-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_2473 15f3254574fa97ff0887780337bc82d4 339 Gene3D G3DSA:1.10.132.50 4 325 2.0E-29 T 15-10-2018 THII_2473 15f3254574fa97ff0887780337bc82d4 339 Pfam PF01992 ATP synthase (C/AC39) subunit 7 327 4.2E-49 T 15-10-2018 IPR002843 ATPase, V0 complex, c/d subunit Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_3253 8264f6c0331c4f140cfdec491c4ecc9c 284 Gene3D G3DSA:2.160.20.80 14 155 3.1E-38 T 15-10-2018 THII_3253 8264f6c0331c4f140cfdec491c4ecc9c 284 SUPERFAMILY SSF141571 20 152 3.92E-33 T 15-10-2018 THII_3253 8264f6c0331c4f140cfdec491c4ecc9c 284 Pfam PF00805 Pentapeptide repeats (8 copies) 100 139 1.2E-9 T 15-10-2018 IPR001646 Pentapeptide repeat THII_3253 8264f6c0331c4f140cfdec491c4ecc9c 284 Pfam PF00805 Pentapeptide repeats (8 copies) 198 234 1.5E-10 T 15-10-2018 IPR001646 Pentapeptide repeat THII_3253 8264f6c0331c4f140cfdec491c4ecc9c 284 Pfam PF00805 Pentapeptide repeats (8 copies) 21 58 3.6E-12 T 15-10-2018 IPR001646 Pentapeptide repeat THII_3253 8264f6c0331c4f140cfdec491c4ecc9c 284 Pfam PF00805 Pentapeptide repeats (8 copies) 155 189 2.4E-7 T 15-10-2018 IPR001646 Pentapeptide repeat THII_3253 8264f6c0331c4f140cfdec491c4ecc9c 284 Pfam PF00805 Pentapeptide repeats (8 copies) 238 271 3.0E-5 T 15-10-2018 IPR001646 Pentapeptide repeat THII_3253 8264f6c0331c4f140cfdec491c4ecc9c 284 SUPERFAMILY SSF141571 116 273 1.88E-37 T 15-10-2018 THII_3253 8264f6c0331c4f140cfdec491c4ecc9c 284 Gene3D G3DSA:2.160.20.80 156 277 2.8E-29 T 15-10-2018 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Pfam PF03796 DnaB-like helicase C terminal domain 549 912 1.5E-94 T 15-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 PRINTS PR00379 Intein signature 421 433 2.2E-10 T 15-10-2018 IPR006142 Intein GO:0016539 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 PRINTS PR00379 Intein signature 834 851 2.2E-10 T 15-10-2018 IPR006142 Intein GO:0016539 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 PRINTS PR00379 Intein signature 852 861 2.2E-10 T 15-10-2018 IPR006142 Intein GO:0016539 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 PRINTS PR00379 Intein signature 292 305 2.2E-10 T 15-10-2018 IPR006142 Intein GO:0016539 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 SUPERFAMILY SSF52540 193 230 2.82E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3456 df807a3387be70aa6f5d9e944d05998f 926 SUPERFAMILY SSF51294 230 548 3.14E-37 T 15-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 SUPERFAMILY SSF52540 841 904 1.22E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Gene3D G3DSA:2.170.16.10 484 548 6.2E-14 T 15-10-2018 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 22 913 1.1E-175 T 15-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Gene3D G3DSA:3.10.28.10 347 483 5.3E-11 T 15-10-2018 IPR027434 Homing endonuclease THII_3456 df807a3387be70aa6f5d9e944d05998f 926 SMART SM00305 818 863 9.2E-14 T 15-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 SMART SM00305 509 554 2.0E-9 T 15-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Gene3D G3DSA:2.170.16.10 233 341 3.3E-18 T 15-10-2018 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 SUPERFAMILY SSF51294 715 857 4.91E-40 T 15-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 SMART SM00306 229 325 1.5E-9 T 15-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 SMART SM00306 715 813 4.7E-23 T 15-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Pfam PF14890 Intein splicing domain 728 814 1.6E-21 T 15-10-2018 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Pfam PF00772 DnaB-like helicase N terminal domain 21 122 1.3E-34 T 15-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Gene3D G3DSA:2.170.16.10 722 857 9.6E-41 T 15-10-2018 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Gene3D G3DSA:1.10.860.10 15 177 5.9E-53 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Pfam PF14528 LAGLIDADG-like domain 421 494 8.4E-8 T 15-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 717 793 8.3E-8 T 15-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 231 305 2.0E-6 T 15-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Pfam PF03796 DnaB-like helicase C terminal domain 199 231 6.6E-11 T 15-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Pfam PF14890 Intein splicing domain 822 857 4.3E-9 T 15-10-2018 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Pfam PF14890 Intein splicing domain 242 548 1.7E-22 T 15-10-2018 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Gene3D G3DSA:3.40.50.300 178 232 2.0E-13 T 15-10-2018 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 Gene3D G3DSA:3.40.50.300 549 721 1.7E-61 T 15-10-2018 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 527 549 2.6E-7 T 15-10-2018 IPR030934 Intein C-terminal splicing region THII_3456 df807a3387be70aa6f5d9e944d05998f 926 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 836 858 1.7E-4 T 15-10-2018 IPR030934 Intein C-terminal splicing region THII_3456 df807a3387be70aa6f5d9e944d05998f 926 SUPERFAMILY SSF48024 19 130 1.83E-37 T 15-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 THII_3456 df807a3387be70aa6f5d9e944d05998f 926 SUPERFAMILY SSF52540 549 721 1.55E-29 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3456 df807a3387be70aa6f5d9e944d05998f 926 SUPERFAMILY SSF55608 407 499 1.36E-9 T 15-10-2018 IPR027434 Homing endonuclease THII_3303 05ea382358f91833431876d3f94272db 201 Gene3D G3DSA:3.40.30.10 2 197 1.3E-71 T 15-10-2018 THII_3303 05ea382358f91833431876d3f94272db 201 SUPERFAMILY SSF52833 3 195 9.45E-64 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_3303 05ea382358f91833431876d3f94272db 201 PIRSF PIRSF000239 1 199 7.4E-60 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 THII_3303 05ea382358f91833431876d3f94272db 201 Pfam PF00578 AhpC/TSA family 5 140 4.9E-34 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 THII_3303 05ea382358f91833431876d3f94272db 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 196 9.4E-10 T 15-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 THII_1301 2271b16fde69836c52bec077511853a9 731 Gene3D G3DSA:3.30.450.20 185 247 1.8E-13 T 15-10-2018 THII_1301 2271b16fde69836c52bec077511853a9 731 Pfam PF02743 Cache domain 152 342 7.0E-17 T 15-10-2018 IPR033479 Double Cache domain 1 THII_1301 2271b16fde69836c52bec077511853a9 731 SMART SM00388 461 529 6.8E-22 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1301 2271b16fde69836c52bec077511853a9 731 SMART SM00387 575 694 1.0E-34 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1301 2271b16fde69836c52bec077511853a9 731 Gene3D G3DSA:1.20.1480.50 351 432 4.4E-8 T 15-10-2018 THII_1301 2271b16fde69836c52bec077511853a9 731 SUPERFAMILY SSF47384 445 531 3.34E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1301 2271b16fde69836c52bec077511853a9 731 Gene3D G3DSA:3.30.565.10 528 695 5.1E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1301 2271b16fde69836c52bec077511853a9 731 SUPERFAMILY SSF158472 380 424 4.05E-8 T 15-10-2018 THII_1301 2271b16fde69836c52bec077511853a9 731 SMART SM00304 380 432 3.3E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1301 2271b16fde69836c52bec077511853a9 731 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 692 2.2E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1301 2271b16fde69836c52bec077511853a9 731 SUPERFAMILY SSF55874 518 692 4.32E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1301 2271b16fde69836c52bec077511853a9 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 3.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1301 2271b16fde69836c52bec077511853a9 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 3.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1301 2271b16fde69836c52bec077511853a9 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 3.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1301 2271b16fde69836c52bec077511853a9 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 3.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1301 2271b16fde69836c52bec077511853a9 731 Gene3D G3DSA:3.30.450.20 248 345 1.8E-13 T 15-10-2018 THII_1301 2271b16fde69836c52bec077511853a9 731 Gene3D G3DSA:1.10.287.130 433 527 1.7E-27 T 15-10-2018 THII_1301 2271b16fde69836c52bec077511853a9 731 Pfam PF00512 His Kinase A (phospho-acceptor) domain 462 529 1.1E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0928 29c767ca3e45d4663da1e8548104baaa 224 Pfam PF04002 RadC-like JAB domain 104 222 4.8E-45 T 15-10-2018 IPR025657 RadC-like JAB domain THII_0928 29c767ca3e45d4663da1e8548104baaa 224 Gene3D G3DSA:3.40.140.10 101 224 7.7E-43 T 15-10-2018 THII_0928 29c767ca3e45d4663da1e8548104baaa 224 SUPERFAMILY SSF47781 17 91 8.01E-9 T 15-10-2018 IPR010994 RuvA domain 2-like THII_0928 29c767ca3e45d4663da1e8548104baaa 224 SUPERFAMILY SSF102712 122 193 3.01E-5 T 15-10-2018 THII_0928 29c767ca3e45d4663da1e8548104baaa 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 223 4.0E-79 T 15-10-2018 IPR001405 Uncharacterised protein family UPF0758 THII_0928 29c767ca3e45d4663da1e8548104baaa 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 15-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 SMART SM00388 868 936 7.0E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 SUPERFAMILY SSF63829 233 490 1.64E-19 T 15-10-2018 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 SUPERFAMILY SSF63829 93 228 7.19E-15 T 15-10-2018 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 983 1091 4.9E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Gene3D G3DSA:2.130.10.10 363 681 2.8E-111 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1019 1033 5.4E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1054 1072 5.4E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1078 1091 5.4E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 SUPERFAMILY SSF63829 517 677 2.62E-9 T 15-10-2018 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 SMART SM00387 982 1093 4.0E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF00512 His Kinase A (phospho-acceptor) domain 869 936 4.9E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 513 535 0.0059 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 132 153 0.0012 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 275 297 0.0016 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 321 342 0.0036 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 83 106 0.016 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 38 61 0.0012 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 180 201 2.2E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 226 248 7.4E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 603 625 0.0093 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 417 440 2.5E-5 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 560 581 1.4E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 369 391 2.0E-6 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07494 Two component regulator propeller 465 488 1.0E-5 T 15-10-2018 IPR011110 Two component regulator propeller THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Gene3D G3DSA:2.130.10.10 254 350 1.5E-31 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Gene3D G3DSA:2.130.10.10 135 253 2.7E-48 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Gene3D G3DSA:2.130.10.10 25 134 6.0E-39 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Pfam PF07495 Y_Y_Y domain 737 801 1.8E-19 T 15-10-2018 IPR011123 Two component regulator three Y THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Gene3D G3DSA:3.30.565.10 935 1093 7.2E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 SUPERFAMILY SSF47384 853 938 5.49E-17 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Gene3D G3DSA:2.60.40.10 682 814 1.6E-46 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 Gene3D G3DSA:1.10.287.130 835 934 3.3E-17 T 15-10-2018 THII_1777 6ea006543c910dfc950c260a2b80dc62 1093 SUPERFAMILY SSF55874 926 1092 5.89E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2816 adb68c5779b02c6bb29229e8ed50d7f2 313 Gene3D G3DSA:3.40.1190.20 1 311 2.4E-78 T 15-10-2018 IPR029056 Ribokinase-like THII_2816 adb68c5779b02c6bb29229e8ed50d7f2 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 THII_2816 adb68c5779b02c6bb29229e8ed50d7f2 313 SUPERFAMILY SSF53613 2 296 1.01E-42 T 15-10-2018 IPR029056 Ribokinase-like THII_2816 adb68c5779b02c6bb29229e8ed50d7f2 313 Pfam PF00294 pfkB family carbohydrate kinase 38 291 1.2E-28 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB THII_3335 2f0fd1507405dc7d9e0ad206972739d4 398 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 224 235 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site THII_3335 2f0fd1507405dc7d9e0ad206972739d4 398 Pfam PF00089 Trypsin 36 278 1.1E-52 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 THII_3335 2f0fd1507405dc7d9e0ad206972739d4 398 SUPERFAMILY SSF50494 10 282 3.89E-73 T 15-10-2018 IPR009003 Peptidase S1, PA clan THII_3335 2f0fd1507405dc7d9e0ad206972739d4 398 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 131 145 6.3E-15 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 THII_3335 2f0fd1507405dc7d9e0ad206972739d4 398 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 223 235 6.3E-15 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 THII_3335 2f0fd1507405dc7d9e0ad206972739d4 398 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 64 79 6.3E-15 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 THII_3335 2f0fd1507405dc7d9e0ad206972739d4 398 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 74 79 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 THII_3335 2f0fd1507405dc7d9e0ad206972739d4 398 Gene3D G3DSA:2.40.10.10 30 283 3.9E-68 T 15-10-2018 THII_3335 2f0fd1507405dc7d9e0ad206972739d4 398 SMART SM00020 35 278 2.4E-70 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00365 196 227 8.6 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00365 438 460 210.0 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00365 147 169 240.0 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00365 507 528 63.0 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00365 170 192 160.0 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 Pfam PF12799 Leucine Rich repeats (2 copies) 197 234 2.2E-7 T 15-10-2018 IPR025875 Leucine rich repeat 4 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 Pfam PF08263 Leucine rich repeat N-terminal domain 49 86 9.4E-7 T 15-10-2018 IPR013210 Leucine-rich repeat-containing N-terminal, plant-type THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00364 438 458 55.0 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00364 170 190 180.0 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00364 618 638 260.0 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00364 484 504 79.0 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00364 196 216 240.0 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00369 147 176 120.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00369 461 490 51.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00369 553 582 33.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00369 196 220 18.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SMART SM00369 507 536 120.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SUPERFAMILY SSF52058 60 386 4.42E-46 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 Gene3D G3DSA:3.80.10.10 45 339 1.2E-53 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 Gene3D G3DSA:2.60.40.10 817 925 1.0E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 SUPERFAMILY SSF52058 386 649 1.67E-42 T 15-10-2018 THII_3131 4963ca1b0192bd584b13983eb8adac26 2038 Gene3D G3DSA:3.80.10.10 341 684 5.7E-51 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 Gene3D G3DSA:1.10.150.20 691 834 1.8E-114 T 15-10-2018 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 SUPERFAMILY SSF47807 173 286 2.09E-30 T 15-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 SMART SM00279 175 210 3.3E-11 T 15-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 173 266 9.7E-26 T 15-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 Gene3D G3DSA:1.20.1060.10 525 640 4.1E-42 T 15-10-2018 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 Pfam PF00476 DNA polymerase family A 533 908 1.5E-156 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 TIGRFAM TIGR00593 pola: DNA polymerase I 11 910 5.9E-289 T 15-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 Gene3D G3DSA:3.40.50.1010 11 279 8.9E-94 T 15-10-2018 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 SUPERFAMILY SSF56672 506 910 2.89E-156 T 15-10-2018 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 SUPERFAMILY SSF53098 310 500 6.01E-59 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 SMART SM00474 312 499 1.7E-44 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 PRINTS PR00868 DNA-polymerase family A (pol I) signature 736 761 6.2E-76 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 PRINTS PR00868 DNA-polymerase family A (pol I) signature 795 806 6.2E-76 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 PRINTS PR00868 DNA-polymerase family A (pol I) signature 827 843 6.2E-76 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 PRINTS PR00868 DNA-polymerase family A (pol I) signature 682 705 6.2E-76 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 PRINTS PR00868 DNA-polymerase family A (pol I) signature 773 784 6.2E-76 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 PRINTS PR00868 DNA-polymerase family A (pol I) signature 660 675 6.2E-76 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 PRINTS PR00868 DNA-polymerase family A (pol I) signature 712 725 6.2E-76 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 PRINTS PR00868 DNA-polymerase family A (pol I) signature 637 659 6.2E-76 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 PRINTS PR00868 DNA-polymerase family A (pol I) signature 857 870 6.2E-76 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 SUPERFAMILY SSF88723 8 172 8.13E-55 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 Pfam PF01612 3'-5' exonuclease 312 499 5.6E-42 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 11 172 4.6E-53 T 15-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 Gene3D G3DSA:3.30.420.10 309 524 1.5E-70 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 SMART SM00475 7 263 7.6E-115 T 15-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 Gene3D G3DSA:1.10.150.20 176 248 8.9E-94 T 15-10-2018 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 Gene3D G3DSA:3.30.70.370 647 906 1.8E-114 T 15-10-2018 THII_1270 a76c6c8339300a81716f3f9ecd5bd890 910 SMART SM00482 668 874 6.2E-119 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_2568 e8de6870525ed22a97473b22236db959 486 Gene3D G3DSA:3.10.20.600 285 349 1.4E-5 T 15-10-2018 THII_2568 e8de6870525ed22a97473b22236db959 486 Gene3D G3DSA:3.40.50.11540 135 281 5.5E-14 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2568 e8de6870525ed22a97473b22236db959 486 Pfam PF13237 4Fe-4S dicluster domain 365 417 4.1E-8 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2568 e8de6870525ed22a97473b22236db959 486 Pfam PF10531 SLBB domain 287 335 2.6E-13 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2568 e8de6870525ed22a97473b22236db959 486 SUPERFAMILY SSF46548 326 437 1.27E-18 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_2568 e8de6870525ed22a97473b22236db959 486 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 130 275 2.5E-47 T 15-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2568 e8de6870525ed22a97473b22236db959 486 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 486 162.905 T 15-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 THII_2568 e8de6870525ed22a97473b22236db959 486 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 106 6.1E-35 T 15-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain THII_2568 e8de6870525ed22a97473b22236db959 486 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 3 435 2.2E-176 T 15-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 THII_2568 e8de6870525ed22a97473b22236db959 486 SUPERFAMILY SSF142019 86 294 6.8E-57 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2568 e8de6870525ed22a97473b22236db959 486 Gene3D G3DSA:1.10.1060.10 355 434 1.7E-10 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_2568 e8de6870525ed22a97473b22236db959 486 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 406 417 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0243 4857b381a5db808f0b7a0746086aa4f7 392 Gene3D G3DSA:3.30.9.50 77 268 1.9E-56 T 15-10-2018 THII_0243 4857b381a5db808f0b7a0746086aa4f7 392 Pfam PF01494 FAD binding domain 7 345 2.6E-31 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 THII_0243 4857b381a5db808f0b7a0746086aa4f7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 3.4E-16 T 15-10-2018 THII_0243 4857b381a5db808f0b7a0746086aa4f7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 3.4E-16 T 15-10-2018 THII_0243 4857b381a5db808f0b7a0746086aa4f7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 3.4E-16 T 15-10-2018 THII_0243 4857b381a5db808f0b7a0746086aa4f7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 3.4E-16 T 15-10-2018 THII_0243 4857b381a5db808f0b7a0746086aa4f7 392 Gene3D G3DSA:3.50.50.60 8 334 1.9E-56 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0243 4857b381a5db808f0b7a0746086aa4f7 392 SUPERFAMILY SSF51905 7 372 9.94E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0196 16e65332ba03e37a75e37300382a9756 407 Gene3D G3DSA:3.30.70.260 260 331 1.3E-26 T 15-10-2018 THII_0196 16e65332ba03e37a75e37300382a9756 407 Gene3D G3DSA:3.40.1160.10 1 256 8.0E-91 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily THII_0196 16e65332ba03e37a75e37300382a9756 407 SUPERFAMILY SSF53633 4 243 3.93E-76 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily THII_0196 16e65332ba03e37a75e37300382a9756 407 SUPERFAMILY SSF55021 247 325 5.31E-18 T 15-10-2018 THII_0196 16e65332ba03e37a75e37300382a9756 407 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 402 1.2E-119 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 THII_0196 16e65332ba03e37a75e37300382a9756 407 Pfam PF01842 ACT domain 267 324 1.6E-8 T 15-10-2018 IPR002912 ACT domain THII_0196 16e65332ba03e37a75e37300382a9756 407 PIRSF PIRSF000726 1 61 2.5E-22 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 THII_0196 16e65332ba03e37a75e37300382a9756 407 PIRSF PIRSF000726 55 407 3.7E-146 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 THII_0196 16e65332ba03e37a75e37300382a9756 407 SUPERFAMILY SSF55021 329 404 1.3E-23 T 15-10-2018 THII_0196 16e65332ba03e37a75e37300382a9756 407 Pfam PF00696 Amino acid kinase family 3 229 2.8E-51 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 THII_0196 16e65332ba03e37a75e37300382a9756 407 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 THII_0196 16e65332ba03e37a75e37300382a9756 407 Gene3D G3DSA:3.30.70.260 332 404 1.9E-29 T 15-10-2018 THII_0196 16e65332ba03e37a75e37300382a9756 407 Pfam PF13840 ACT domain 337 398 9.6E-16 T 15-10-2018 IPR027795 CASTOR, ACT domain THII_0196 16e65332ba03e37a75e37300382a9756 407 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 403 1.3E-134 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 THII_0196 16e65332ba03e37a75e37300382a9756 407 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 5.9E-5 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 THII_0196 16e65332ba03e37a75e37300382a9756 407 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 5.9E-5 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 Gene3D G3DSA:3.40.50.300 399 603 3.1E-86 T 15-10-2018 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 SUPERFAMILY SSF81886 603 878 7.72E-85 T 15-10-2018 IPR036266 SecA, Wing/Scaffold superfamily THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 SMART SM00957 1 384 6.7E-287 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 Hamap MF_01382 Protein translocase subunit SecA [secA]. 1 815 19.667 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 8 801 0.0 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 SMART SM00958 208 340 5.6E-79 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 Pfam PF01043 SecA preprotein cross-linking domain 212 340 2.0E-38 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 PRINTS PR00906 SecA protein signature 81 95 1.5E-68 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 PRINTS PR00906 SecA protein signature 150 170 1.5E-68 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 PRINTS PR00906 SecA protein signature 97 107 1.5E-68 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 PRINTS PR00906 SecA protein signature 321 343 1.5E-68 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 PRINTS PR00906 SecA protein signature 358 375 1.5E-68 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 PRINTS PR00906 SecA protein signature 43 67 1.5E-68 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 PRINTS PR00906 SecA protein signature 395 408 1.5E-68 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 SUPERFAMILY SSF52540 399 601 7.86E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 SUPERFAMILY SSF52540 2 397 1.56E-82 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 SUPERFAMILY SSF81767 207 350 1.96E-43 T 15-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 Gene3D G3DSA:3.40.50.300 3 397 7.6E-177 T 15-10-2018 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 Pfam PF02810 SEC-C motif 870 888 4.6E-10 T 15-10-2018 IPR004027 SEC-C motif THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 Pfam PF07517 SecA DEAD-like domain 3 384 9.3E-131 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 Gene3D G3DSA:1.10.3060.10 604 816 5.9E-78 T 15-10-2018 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 Gene3D G3DSA:3.90.1440.10 209 350 7.6E-177 T 15-10-2018 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 ProSitePatterns PS01312 SecA family signature. 482 497 - T 15-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 THII_1380 5144edfb437f7a1c570af56b8ae891f6 890 Pfam PF07516 SecA Wing and Scaffold domain 600 813 1.1E-68 T 15-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 Pfam PF01471 Putative peptidoglycan binding domain 434 486 2.9E-11 T 15-10-2018 IPR002477 Peptidoglycan binding-like THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 57 71 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 Gene3D G3DSA:2.130.10.10 511 705 2.7E-9 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 Gene3D G3DSA:2.130.10.10 29 184 2.1E-21 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 SUPERFAMILY SSF47090 421 487 2.2E-12 T 15-10-2018 IPR036365 PGBD-like superfamily THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 Pfam PF00656 Caspase domain 814 1039 1.9E-12 T 15-10-2018 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 Pfam PF00400 WD domain, G-beta repeat 190 211 0.093 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 Pfam PF00400 WD domain, G-beta repeat 41 70 0.016 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 Gene3D G3DSA:3.40.50.1460 811 1049 9.0E-20 T 15-10-2018 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 Gene3D G3DSA:2.130.10.10 185 348 9.7E-12 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 SMART SM00320 32 70 0.013 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 SMART SM00320 130 170 0.83 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 SMART SM00320 603 641 400.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 SMART SM00320 171 212 0.18 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 SMART SM00320 561 600 17.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 SMART SM00320 74 127 20.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 SUPERFAMILY SSF82171 41 394 2.75E-37 T 15-10-2018 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 SUPERFAMILY SSF50978 529 643 1.65E-10 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 SUPERFAMILY SSF52129 812 1039 2.56E-12 T 15-10-2018 IPR029030 Caspase-like domain superfamily THII_2778 567ac753df3e13cbe9ed4d88fb662955 1082 Gene3D G3DSA:1.10.101.10 416 491 7.0E-9 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 THII_1281 cfab59da1c308756132a25801151191d 483 SUPERFAMILY SSF54637 15 153 4.92E-31 T 15-10-2018 IPR029069 HotDog domain superfamily THII_1281 cfab59da1c308756132a25801151191d 483 SUPERFAMILY SSF53659 181 468 1.11E-68 T 15-10-2018 THII_1281 cfab59da1c308756132a25801151191d 483 Pfam PF01515 Phosphate acetyl/butaryl transferase 246 462 9.1E-47 T 15-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 THII_1281 cfab59da1c308756132a25801151191d 483 Pfam PF01575 MaoC like domain 31 123 1.9E-15 T 15-10-2018 IPR002539 MaoC-like dehydratase domain THII_1281 cfab59da1c308756132a25801151191d 483 Gene3D G3DSA:3.10.129.10 12 167 3.1E-36 T 15-10-2018 THII_1281 cfab59da1c308756132a25801151191d 483 Gene3D G3DSA:3.40.718.10 173 468 1.4E-96 T 15-10-2018 THII_3371 d3028b43e9c13a6ce61d6c0f54b39d0d 1357 Gene3D G3DSA:2.60.40.420 202 410 3.1E-56 T 15-10-2018 IPR008972 Cupredoxin THII_3371 d3028b43e9c13a6ce61d6c0f54b39d0d 1357 SUPERFAMILY SSF49503 1103 1238 7.03E-7 T 15-10-2018 IPR008972 Cupredoxin THII_3371 d3028b43e9c13a6ce61d6c0f54b39d0d 1357 SUPERFAMILY SSF49503 428 685 6.09E-11 T 15-10-2018 IPR008972 Cupredoxin THII_3371 d3028b43e9c13a6ce61d6c0f54b39d0d 1357 SUPERFAMILY SSF49503 208 412 8.9E-16 T 15-10-2018 IPR008972 Cupredoxin THII_3371 d3028b43e9c13a6ce61d6c0f54b39d0d 1357 Gene3D G3DSA:2.60.40.10 1251 1342 1.3E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3371 d3028b43e9c13a6ce61d6c0f54b39d0d 1357 SUPERFAMILY SSF49265 1238 1330 3.73E-7 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_3470 43c43bf61740e75861938131020096b9 477 Pfam PF01523 Putative modulator of DNA gyrase 19 322 1.4E-42 T 15-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 THII_3470 43c43bf61740e75861938131020096b9 477 Gene3D G3DSA:3.30.2290.10 16 223 1.9E-7 T 15-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal THII_3470 43c43bf61740e75861938131020096b9 477 SUPERFAMILY SSF111283 3 473 2.09E-91 T 15-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 THII_3348 1015f50373e716b8fecb20b0a1e15fc0 994 SUPERFAMILY SSF53822 31 394 6.06E-63 T 15-10-2018 IPR028082 Periplasmic binding protein-like I THII_3348 1015f50373e716b8fecb20b0a1e15fc0 994 Gene3D G3DSA:3.40.50.2300 148 299 8.1E-80 T 15-10-2018 THII_3348 1015f50373e716b8fecb20b0a1e15fc0 994 Pfam PF00924 Mechanosensitive ion channel 749 943 4.2E-30 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 THII_3348 1015f50373e716b8fecb20b0a1e15fc0 994 SUPERFAMILY SSF50182 789 853 3.24E-14 T 15-10-2018 IPR010920 LSM domain superfamily THII_3348 1015f50373e716b8fecb20b0a1e15fc0 994 Gene3D G3DSA:2.30.30.60 803 853 2.3E-10 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily THII_3348 1015f50373e716b8fecb20b0a1e15fc0 994 SUPERFAMILY SSF82689 859 955 3.14E-10 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 THII_3348 1015f50373e716b8fecb20b0a1e15fc0 994 Gene3D G3DSA:3.40.50.2300 35 379 8.1E-80 T 15-10-2018 THII_3348 1015f50373e716b8fecb20b0a1e15fc0 994 Pfam PF13458 Periplasmic binding protein 31 374 6.4E-45 T 15-10-2018 IPR028081 Leucine-binding protein domain THII_1459 d449718247ffe7334fd6f1c6e0b74e40 463 SUPERFAMILY SSF63411 249 444 1.39E-35 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 THII_1459 d449718247ffe7334fd6f1c6e0b74e40 463 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 59 82 - T 15-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 THII_1459 d449718247ffe7334fd6f1c6e0b74e40 463 Pfam PF00675 Insulinase (Peptidase family M16) 41 184 7.4E-28 T 15-10-2018 IPR011765 Peptidase M16, N-terminal THII_1459 d449718247ffe7334fd6f1c6e0b74e40 463 Pfam PF05193 Peptidase M16 inactive domain 192 376 4.2E-30 T 15-10-2018 IPR007863 Peptidase M16, C-terminal THII_1459 d449718247ffe7334fd6f1c6e0b74e40 463 Gene3D G3DSA:3.30.830.10 247 445 1.1E-50 T 15-10-2018 THII_1459 d449718247ffe7334fd6f1c6e0b74e40 463 SUPERFAMILY SSF63411 27 244 1.83E-64 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 THII_1459 d449718247ffe7334fd6f1c6e0b74e40 463 Gene3D G3DSA:3.30.830.10 23 246 1.8E-79 T 15-10-2018 THII_1021 339be41eef27da9acf6fead5ecbb8931 559 Gene3D G3DSA:3.40.50.2300 2 140 3.1E-39 T 15-10-2018 THII_1021 339be41eef27da9acf6fead5ecbb8931 559 SMART SM00091 140 206 2.6E-9 T 15-10-2018 IPR000014 PAS domain THII_1021 339be41eef27da9acf6fead5ecbb8931 559 SMART SM00091 263 333 1.0E-6 T 15-10-2018 IPR000014 PAS domain THII_1021 339be41eef27da9acf6fead5ecbb8931 559 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 136 261 2.1E-23 T 15-10-2018 IPR000014 PAS domain THII_1021 339be41eef27da9acf6fead5ecbb8931 559 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 266 384 4.3E-17 T 15-10-2018 IPR000014 PAS domain THII_1021 339be41eef27da9acf6fead5ecbb8931 559 Pfam PF00990 Diguanylate cyclase, GGDEF domain 389 545 4.3E-40 T 15-10-2018 IPR000160 GGDEF domain THII_1021 339be41eef27da9acf6fead5ecbb8931 559 SUPERFAMILY SSF52172 9 141 9.82E-40 T 15-10-2018 IPR011006 CheY-like superfamily THII_1021 339be41eef27da9acf6fead5ecbb8931 559 Pfam PF13426 PAS domain 274 375 6.6E-15 T 15-10-2018 IPR000014 PAS domain THII_1021 339be41eef27da9acf6fead5ecbb8931 559 Pfam PF00072 Response regulator receiver domain 11 122 2.3E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1021 339be41eef27da9acf6fead5ecbb8931 559 Gene3D G3DSA:3.30.70.270 385 558 1.1E-50 T 15-10-2018 THII_1021 339be41eef27da9acf6fead5ecbb8931 559 SUPERFAMILY SSF55785 128 253 1.68E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_1021 339be41eef27da9acf6fead5ecbb8931 559 SMART SM00267 377 550 6.2E-50 T 15-10-2018 IPR000160 GGDEF domain THII_1021 339be41eef27da9acf6fead5ecbb8931 559 Gene3D G3DSA:3.30.450.20 141 263 8.4E-21 T 15-10-2018 THII_1021 339be41eef27da9acf6fead5ecbb8931 559 SMART SM00086 335 377 0.19 T 15-10-2018 IPR001610 PAC motif THII_1021 339be41eef27da9acf6fead5ecbb8931 559 SMART SM00086 213 255 3.3E-5 T 15-10-2018 IPR001610 PAC motif THII_1021 339be41eef27da9acf6fead5ecbb8931 559 SUPERFAMILY SSF55785 268 375 9.77E-28 T 15-10-2018 IPR035965 PAS domain superfamily THII_1021 339be41eef27da9acf6fead5ecbb8931 559 Pfam PF08448 PAS fold 146 257 9.2E-10 T 15-10-2018 IPR013656 PAS fold-4 THII_1021 339be41eef27da9acf6fead5ecbb8931 559 SMART SM00448 9 122 9.6E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1021 339be41eef27da9acf6fead5ecbb8931 559 Gene3D G3DSA:3.30.450.20 264 384 2.6E-33 T 15-10-2018 THII_1021 339be41eef27da9acf6fead5ecbb8931 559 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 387 548 4.2E-29 T 15-10-2018 IPR000160 GGDEF domain THII_1021 339be41eef27da9acf6fead5ecbb8931 559 SUPERFAMILY SSF55073 393 552 3.45E-41 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 SUPERFAMILY SSF55785 33 140 9.42E-25 T 15-10-2018 IPR035965 PAS domain superfamily THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 Gene3D G3DSA:3.30.450.20 27 153 5.5E-31 T 15-10-2018 THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 148 4.6E-20 T 15-10-2018 IPR000014 PAS domain THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 SMART SM00091 28 97 5.2E-4 T 15-10-2018 IPR000014 PAS domain THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 SMART SM00091 154 219 46.0 T 15-10-2018 IPR000014 PAS domain THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 SMART SM00387 405 518 2.8E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 Gene3D G3DSA:3.30.565.10 363 518 1.7E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 474 7.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 460 7.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 7.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 Gene3D G3DSA:3.30.450.20 154 283 1.5E-7 T 15-10-2018 THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 SMART SM00086 100 142 3.0E-5 T 15-10-2018 IPR001610 PAC motif THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 516 1.2E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 TIGRFAM TIGR02938 nifL_nitrog: nitrogen fixation negative regulator NifL 25 515 3.6E-193 T 15-10-2018 IPR014285 Nitrogen fixation negative regulator NifL GO:0007165|GO:0009399 THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 Pfam PF00989 PAS fold 30 139 1.5E-14 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 SUPERFAMILY SSF55874 359 516 1.57E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2571 afc7786aa647af0f266c31bf41dbfdc9 519 SUPERFAMILY SSF55785 139 248 1.34E-7 T 15-10-2018 IPR035965 PAS domain superfamily THII_1908 54d85db2873d8f37b965e435332759f8 615 Gene3D G3DSA:1.10.10.10 455 531 3.7E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1908 54d85db2873d8f37b965e435332759f8 615 Pfam PF04546 Sigma-70, non-essential region 140 351 2.0E-44 T 15-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 THII_1908 54d85db2873d8f37b965e435332759f8 615 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 378 614 7.1E-121 T 15-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 THII_1908 54d85db2873d8f37b965e435332759f8 615 Pfam PF04542 Sigma-70 region 2 382 451 1.8E-21 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 Gene3D G3DSA:1.10.601.10 113 451 2.5E-115 T 15-10-2018 THII_1908 54d85db2873d8f37b965e435332759f8 615 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 575 601 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 Pfam PF04539 Sigma-70 region 3 461 536 2.8E-30 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 Gene3D G3DSA:1.10.220.120 2 65 5.8E-28 T 15-10-2018 THII_1908 54d85db2873d8f37b965e435332759f8 615 SUPERFAMILY SSF88659 455 528 7.1E-21 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_1908 54d85db2873d8f37b965e435332759f8 615 SUPERFAMILY SSF88946 115 449 9.42E-90 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 378 603 9.7E-36 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 Pfam PF04545 Sigma-70, region 4 551 603 4.3E-19 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 PRINTS PR00046 Major sigma-70 factor signature 406 419 3.1E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 PRINTS PR00046 Major sigma-70 factor signature 430 438 3.1E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 PRINTS PR00046 Major sigma-70 factor signature 575 590 3.1E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 PRINTS PR00046 Major sigma-70 factor signature 590 601 3.1E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 PRINTS PR00046 Major sigma-70 factor signature 554 566 3.1E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 406 419 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 SUPERFAMILY SSF88659 512 613 3.4E-26 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_1908 54d85db2873d8f37b965e435332759f8 615 Pfam PF03979 Sigma-70 factor, region 1.1 4 82 9.4E-29 T 15-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 THII_1908 54d85db2873d8f37b965e435332759f8 615 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 615 43.325 T 15-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 THII_1908 54d85db2873d8f37b965e435332759f8 615 Gene3D G3DSA:1.10.10.10 532 615 5.6E-36 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1908 54d85db2873d8f37b965e435332759f8 615 Pfam PF00140 Sigma-70 factor, region 1.2 98 129 3.4E-13 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 THII_1608 faf23d81367f50c71d91b17022a46ce5 84 SUPERFAMILY SSF143011 6 76 3.73E-7 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1345 280402b0a981949a24789ec547b3d42b 178 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 174 1.3E-74 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 THII_1345 280402b0a981949a24789ec547b3d42b 178 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 174 5.4E-78 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 THII_1345 280402b0a981949a24789ec547b3d42b 178 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 166 4.0E-62 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 THII_1345 280402b0a981949a24789ec547b3d42b 178 Gene3D G3DSA:2.60.120.10 1 176 2.8E-75 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_1345 280402b0a981949a24789ec547b3d42b 178 SUPERFAMILY SSF51182 1 176 1.56E-77 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily THII_1692 c7fd9106f99c90d0f2b831d92bfdef37 201 Gene3D G3DSA:1.10.760.10 105 197 2.6E-18 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1692 c7fd9106f99c90d0f2b831d92bfdef37 201 Gene3D G3DSA:1.10.760.10 28 102 4.7E-19 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1692 c7fd9106f99c90d0f2b831d92bfdef37 201 SUPERFAMILY SSF46626 107 196 4.54E-11 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1692 c7fd9106f99c90d0f2b831d92bfdef37 201 SUPERFAMILY SSF46626 22 100 8.29E-14 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1692 c7fd9106f99c90d0f2b831d92bfdef37 201 PIRSF PIRSF000005 4 198 3.4E-29 T 15-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Gene3D G3DSA:3.30.450.20 635 757 1.0E-14 T 15-10-2018 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SUPERFAMILY SSF55785 1281 1389 2.9E-10 T 15-10-2018 IPR035965 PAS domain superfamily THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Pfam PF08448 PAS fold 767 868 5.8E-9 T 15-10-2018 IPR013656 PAS fold-4 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Gene3D G3DSA:3.30.450.20 7 147 2.6E-12 T 15-10-2018 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Gene3D G3DSA:3.30.450.20 1278 1390 3.3E-11 T 15-10-2018 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SUPERFAMILY SSF55785 1030 1122 1.38E-13 T 15-10-2018 IPR035965 PAS domain superfamily THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Pfam PF08447 PAS fold 170 254 5.0E-19 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1025 1117 8.8E-10 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 382 9.9E-12 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 886 984 4.1E-11 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 761 876 1.7E-7 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1284 1388 1.8E-10 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 386 507 7.7E-20 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 510 634 2.7E-10 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1152 1200 1.7E-6 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 164 270 2.9E-14 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Gene3D G3DSA:3.30.450.20 156 265 7.9E-25 T 15-10-2018 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00091 6 72 0.0017 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00091 1028 1097 1.4E-5 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00091 512 578 2.0E-9 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00091 1154 1222 6.4E-4 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00091 1280 1347 1.4E-4 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00091 761 827 0.064 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00091 274 340 0.003 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00091 147 214 2.5 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00091 389 459 1.9E-6 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00091 889 954 4.2E-7 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00091 635 701 0.56 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Gene3D G3DSA:3.30.450.20 1146 1265 7.4E-10 T 15-10-2018 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SUPERFAMILY SSF55785 745 863 1.95E-13 T 15-10-2018 IPR035965 PAS domain superfamily THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Pfam PF00989 PAS fold 13 100 5.5E-6 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Pfam PF00989 PAS fold 890 971 1.8E-6 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Pfam PF00989 PAS fold 1029 1105 9.7E-7 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Pfam PF00989 PAS fold 1284 1336 1.9E-6 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Gene3D G3DSA:3.30.450.20 758 878 2.0E-16 T 15-10-2018 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00086 707 749 19.0 T 15-10-2018 IPR001610 PAC motif THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00086 585 627 0.0089 T 15-10-2018 IPR001610 PAC motif THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00086 221 263 6.7E-7 T 15-10-2018 IPR001610 PAC motif THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SMART SM00086 459 500 140.0 T 15-10-2018 IPR001610 PAC motif THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SUPERFAMILY SSF55785 374 498 5.17E-18 T 15-10-2018 IPR035965 PAS domain superfamily THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SUPERFAMILY SSF55785 497 624 1.19E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SUPERFAMILY SSF55785 12 103 2.09E-11 T 15-10-2018 IPR035965 PAS domain superfamily THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SUPERFAMILY SSF55785 260 375 7.78E-13 T 15-10-2018 IPR035965 PAS domain superfamily THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Pfam PF13426 PAS domain 400 499 4.7E-6 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Pfam PF13426 PAS domain 284 375 6.9E-8 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Pfam PF13426 PAS domain 646 748 2.8E-4 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Pfam PF13426 PAS domain 528 626 1.5E-9 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SUPERFAMILY SSF55785 1149 1248 6.81E-10 T 15-10-2018 IPR035965 PAS domain superfamily THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Pfam PF13188 PAS domain 1155 1198 0.019 T 15-10-2018 IPR000014 PAS domain THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Gene3D G3DSA:3.30.450.20 266 375 2.4E-13 T 15-10-2018 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Gene3D G3DSA:3.30.450.20 879 1000 5.3E-14 T 15-10-2018 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Gene3D G3DSA:3.30.450.20 376 498 3.7E-17 T 15-10-2018 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SUPERFAMILY SSF55785 159 265 1.52E-19 T 15-10-2018 IPR035965 PAS domain superfamily THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SUPERFAMILY SSF55785 877 991 4.36E-15 T 15-10-2018 IPR035965 PAS domain superfamily THII_1833 ee0b3101b5353f76271654a3935725cc 1390 SUPERFAMILY SSF55785 625 745 1.65E-15 T 15-10-2018 IPR035965 PAS domain superfamily THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Gene3D G3DSA:3.30.450.20 1007 1143 9.2E-12 T 15-10-2018 THII_1833 ee0b3101b5353f76271654a3935725cc 1390 Gene3D G3DSA:3.30.450.20 499 624 9.4E-18 T 15-10-2018 THII_0251 743f40e43491eefbfabbd85a0b98d4fe 438 Gene3D G3DSA:3.40.350.10 1 170 1.5E-58 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal THII_0251 743f40e43491eefbfabbd85a0b98d4fe 438 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 347 359 - T 15-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site THII_0251 743f40e43491eefbfabbd85a0b98d4fe 438 SUPERFAMILY SSF53092 1 173 1.19E-55 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal THII_0251 743f40e43491eefbfabbd85a0b98d4fe 438 SMART SM01011 1 135 1.0E-62 T 15-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 THII_0251 743f40e43491eefbfabbd85a0b98d4fe 438 SUPERFAMILY SSF55920 174 434 7.46E-83 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like THII_0251 743f40e43491eefbfabbd85a0b98d4fe 438 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 122 2.0E-37 T 15-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 THII_0251 743f40e43491eefbfabbd85a0b98d4fe 438 Pfam PF00557 Metallopeptidase family M24 180 411 3.8E-63 T 15-10-2018 IPR000994 Peptidase M24 THII_0251 743f40e43491eefbfabbd85a0b98d4fe 438 Gene3D G3DSA:3.90.230.10 171 437 6.7E-98 T 15-10-2018 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 Pfam PF03484 tRNA synthetase B5 domain 407 470 5.4E-18 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 SMART SM00874 402 470 4.7E-26 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 Gene3D G3DSA:3.30.56.10 7 178 4.1E-67 T 15-10-2018 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 795 3.4E-250 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 Gene3D G3DSA:3.30.930.10 485 692 9.3E-56 T 15-10-2018 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 Pfam PF01588 Putative tRNA binding domain 45 144 3.0E-23 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 SUPERFAMILY SSF54991 697 795 6.41E-30 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 SUPERFAMILY SSF50249 35 196 4.28E-43 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0154 86179ffec83ced0aefe255f19f4426a5 796 Gene3D G3DSA:3.30.56.10 400 474 3.5E-23 T 15-10-2018 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 Gene3D G3DSA:3.30.70.380 703 796 7.1E-30 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 789 43.314 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 SUPERFAMILY SSF55681 466 687 1.94E-46 T 15-10-2018 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 Gene3D G3DSA:3.50.40.10 196 394 7.2E-75 T 15-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 SMART SM00896 702 795 1.4E-41 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 Gene3D G3DSA:2.40.50.140 39 153 4.1E-67 T 15-10-2018 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 SUPERFAMILY SSF56037 195 392 1.12E-69 T 15-10-2018 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 SUPERFAMILY SSF46955 404 474 1.19E-18 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily THII_0154 86179ffec83ced0aefe255f19f4426a5 796 Pfam PF03147 Ferredoxin-fold anticodon binding domain 702 795 3.5E-28 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 Pfam PF03483 B3/4 domain 211 383 6.4E-66 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 THII_0154 86179ffec83ced0aefe255f19f4426a5 796 SMART SM00873 211 384 3.6E-88 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 THII_2530 755f4a5fe0a7f24984ed55c983b9c8f1 154 Pfam PF05425 Copper resistance protein D 47 146 6.0E-12 T 15-10-2018 IPR008457 Copper resistance protein D GO:0016021 THII_1909 76f7d8a2f8468aeac3ceb264b8d3d6f0 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 3 266 34.514 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_1909 76f7d8a2f8468aeac3ceb264b8d3d6f0 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 15-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_1909 76f7d8a2f8468aeac3ceb264b8d3d6f0 268 Gene3D G3DSA:3.40.50.720 5 265 3.7E-103 T 15-10-2018 THII_1909 76f7d8a2f8468aeac3ceb264b8d3d6f0 268 PIRSF PIRSF000161 1 268 6.4E-89 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_1909 76f7d8a2f8468aeac3ceb264b8d3d6f0 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 126 8.1E-40 T 15-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_1909 76f7d8a2f8468aeac3ceb264b8d3d6f0 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 5.8E-44 T 15-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_1909 76f7d8a2f8468aeac3ceb264b8d3d6f0 268 Gene3D G3DSA:3.30.360.10 128 235 3.7E-103 T 15-10-2018 THII_1909 76f7d8a2f8468aeac3ceb264b8d3d6f0 268 SUPERFAMILY SSF51735 3 267 1.62E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1909 76f7d8a2f8468aeac3ceb264b8d3d6f0 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 266 5.2E-98 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_1909 76f7d8a2f8468aeac3ceb264b8d3d6f0 268 SUPERFAMILY SSF55347 128 237 7.63E-37 T 15-10-2018 THII_1815 ebf14611aebcd7021c811dab2a11b8bb 140 Gene3D G3DSA:3.30.420.130 1 121 1.3E-33 T 15-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THII_1815 ebf14611aebcd7021c811dab2a11b8bb 140 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 12 105 7.2E-21 T 15-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis THII_1815 ebf14611aebcd7021c811dab2a11b8bb 140 SUPERFAMILY SSF53146 3 119 6.8E-31 T 15-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THII_1815 ebf14611aebcd7021c811dab2a11b8bb 140 TIGRFAM TIGR02663 nifX: nitrogen fixation protein NifX 3 119 1.6E-34 T 15-10-2018 IPR013480 Nitrogen fixation protein NifX GO:0009399|GO:0051188|GO:0051540 THII_1958 0b145cf9e91e029c555b72fdb3d13489 249 SUPERFAMILY SSF56300 5 242 2.17E-41 T 15-10-2018 THII_1958 0b145cf9e91e029c555b72fdb3d13489 249 Pfam PF00149 Calcineurin-like phosphoesterase 5 193 2.5E-14 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 THII_1958 0b145cf9e91e029c555b72fdb3d13489 249 Gene3D G3DSA:3.60.21.10 1 248 3.1E-50 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like THII_3287 771803572255a701697839c7e231265d 382 SUPERFAMILY SSF53474 13 373 3.09E-102 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_3287 771803572255a701697839c7e231265d 382 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 13 374 29.227 T 15-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 THII_3287 771803572255a701697839c7e231265d 382 Gene3D G3DSA:1.10.1740.110 187 292 4.4E-143 T 15-10-2018 THII_3287 771803572255a701697839c7e231265d 382 Gene3D G3DSA:3.40.50.1820 26 361 4.4E-143 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_3287 771803572255a701697839c7e231265d 382 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 22 373 2.4E-141 T 15-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 THII_3287 771803572255a701697839c7e231265d 382 PIRSF PIRSF000443 7 380 5.3E-136 T 15-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 THII_3287 771803572255a701697839c7e231265d 382 Pfam PF00561 alpha/beta hydrolase fold 51 359 2.3E-34 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_2766 e6b4c8e6fcdafd54bc8d3753e590ae20 213 SUPERFAMILY SSF54523 9 98 1.1E-6 T 15-10-2018 THII_2592 41664a7dc6485605a0e67a24ab5cc626 133 Gene3D G3DSA:2.90.10.20 77 128 5.3E-21 T 15-10-2018 THII_2592 41664a7dc6485605a0e67a24ab5cc626 133 Gene3D G3DSA:2.90.10.10 16 76 3.6E-20 T 15-10-2018 IPR036426 Bulb-type lectin domain superfamily THII_2592 41664a7dc6485605a0e67a24ab5cc626 133 Pfam PF01453 D-mannose binding lectin 37 101 4.6E-15 T 15-10-2018 IPR001480 Bulb-type lectin domain THII_2592 41664a7dc6485605a0e67a24ab5cc626 133 SMART SM00108 23 132 7.5E-21 T 15-10-2018 IPR001480 Bulb-type lectin domain THII_2592 41664a7dc6485605a0e67a24ab5cc626 133 SUPERFAMILY SSF51110 24 131 4.87E-27 T 15-10-2018 IPR036426 Bulb-type lectin domain superfamily THII_3716 7277b755289564187dce5a88137b27ed 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 411 1.3E-167 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_3716 7277b755289564187dce5a88137b27ed 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 369 2.3E-26 T 15-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 THII_3716 7277b755289564187dce5a88137b27ed 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 280 3.1E-76 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 THII_3716 7277b755289564187dce5a88137b27ed 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 1.1E-27 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_3716 7277b755289564187dce5a88137b27ed 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 369 382 1.1E-27 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_3716 7277b755289564187dce5a88137b27ed 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 1.1E-27 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_3716 7277b755289564187dce5a88137b27ed 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 1.1E-27 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_3716 7277b755289564187dce5a88137b27ed 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 1.1E-27 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_3716 7277b755289564187dce5a88137b27ed 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 412 42.186 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_3716 7277b755289564187dce5a88137b27ed 415 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 228 241 - T 15-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site THII_3716 7277b755289564187dce5a88137b27ed 415 Gene3D G3DSA:3.20.20.10 34 275 1.0E-154 T 15-10-2018 IPR029066 PLP-binding barrel THII_3716 7277b755289564187dce5a88137b27ed 415 Gene3D G3DSA:2.40.37.10 17 409 1.0E-154 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 THII_3716 7277b755289564187dce5a88137b27ed 415 SUPERFAMILY SSF50621 254 412 4.81E-55 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 THII_3716 7277b755289564187dce5a88137b27ed 415 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 15-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site THII_3716 7277b755289564187dce5a88137b27ed 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 4.5E-30 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_3716 7277b755289564187dce5a88137b27ed 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 4.5E-30 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_3716 7277b755289564187dce5a88137b27ed 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 4.5E-30 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_3716 7277b755289564187dce5a88137b27ed 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 379 401 4.5E-30 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_3716 7277b755289564187dce5a88137b27ed 415 SUPERFAMILY SSF51419 26 282 1.15E-81 T 15-10-2018 IPR029066 PLP-binding barrel THII_0793 f016349bec4071e2995cd3364f6855a1 170 SUPERFAMILY SSF52980 20 168 2.09E-16 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0793 f016349bec4071e2995cd3364f6855a1 170 Pfam PF05685 Putative restriction endonuclease 12 148 8.4E-15 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0793 f016349bec4071e2995cd3364f6855a1 170 Gene3D G3DSA:3.90.1570.10 8 170 2.4E-19 T 15-10-2018 THII_2794 ac2c7bce07764634c0bf4f5e8fbd1079 85 ProSitePatterns PS00012 Phosphopantetheine attachment site. 37 52 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site THII_2794 ac2c7bce07764634c0bf4f5e8fbd1079 85 SUPERFAMILY SSF47336 6 84 1.44E-17 T 15-10-2018 IPR036736 ACP-like superfamily THII_2794 ac2c7bce07764634c0bf4f5e8fbd1079 85 Gene3D G3DSA:1.10.1200.10 5 84 2.0E-22 T 15-10-2018 IPR036736 ACP-like superfamily THII_2794 ac2c7bce07764634c0bf4f5e8fbd1079 85 Pfam PF00550 Phosphopantetheine attachment site 9 79 2.1E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_0091 8b89a0b07271de6e2e2d0675a5270cbc 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 THII_0091 8b89a0b07271de6e2e2d0675a5270cbc 477 Gene3D G3DSA:3.40.1190.20 4 310 5.5E-106 T 15-10-2018 IPR029056 Ribokinase-like THII_0091 8b89a0b07271de6e2e2d0675a5270cbc 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 472 40.269 T 15-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 THII_0091 8b89a0b07271de6e2e2d0675a5270cbc 477 SUPERFAMILY SSF52374 339 468 2.22E-24 T 15-10-2018 THII_0091 8b89a0b07271de6e2e2d0675a5270cbc 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.5E-117 T 15-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 THII_0091 8b89a0b07271de6e2e2d0675a5270cbc 477 Pfam PF00294 pfkB family carbohydrate kinase 12 302 2.2E-44 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB THII_0091 8b89a0b07271de6e2e2d0675a5270cbc 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 340 406 3.6E-18 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 THII_0091 8b89a0b07271de6e2e2d0675a5270cbc 477 SUPERFAMILY SSF53613 12 312 1.17E-56 T 15-10-2018 IPR029056 Ribokinase-like THII_0091 8b89a0b07271de6e2e2d0675a5270cbc 477 Pfam PF01467 Cytidylyltransferase-like 343 433 9.7E-17 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 THII_0091 8b89a0b07271de6e2e2d0675a5270cbc 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 330 469 8.1E-61 T 15-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 THII_0091 8b89a0b07271de6e2e2d0675a5270cbc 477 Gene3D G3DSA:3.40.50.620 314 473 2.0E-40 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1110 1266 6.1E-54 T 15-10-2018 IPR000160 GGDEF domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Pfam PF00989 PAS fold 989 1096 2.7E-12 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SUPERFAMILY SSF55785 381 489 1.77E-23 T 15-10-2018 IPR035965 PAS domain superfamily THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Gene3D G3DSA:3.30.450.20 1 127 4.9E-10 T 15-10-2018 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SUPERFAMILY SSF55785 605 732 4.89E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Gene3D G3DSA:3.30.450.20 128 194 1.1E-19 T 15-10-2018 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Gene3D G3DSA:2.10.70.100 199 244 4.5E-16 T 15-10-2018 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Gene3D G3DSA:3.30.450.20 497 618 8.7E-15 T 15-10-2018 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Gene3D G3DSA:3.30.450.20 747 863 6.8E-16 T 15-10-2018 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SUPERFAMILY SSF55785 241 369 4.33E-22 T 15-10-2018 IPR035965 PAS domain superfamily THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SUPERFAMILY SSF55785 849 975 1.82E-17 T 15-10-2018 IPR035965 PAS domain superfamily THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Gene3D G3DSA:3.30.450.20 619 746 2.2E-24 T 15-10-2018 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SUPERFAMILY SSF55785 731 850 2.97E-18 T 15-10-2018 IPR035965 PAS domain superfamily THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Gene3D G3DSA:3.30.450.20 978 1097 6.5E-29 T 15-10-2018 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Gene3D G3DSA:3.30.450.20 864 977 6.8E-24 T 15-10-2018 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SUPERFAMILY SSF55785 483 606 1.77E-16 T 15-10-2018 IPR035965 PAS domain superfamily THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SUPERFAMILY SSF55785 136 247 8.55E-28 T 15-10-2018 IPR035965 PAS domain superfamily THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Gene3D G3DSA:3.30.450.20 380 496 5.8E-23 T 15-10-2018 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00091 985 1055 1.7E-4 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00091 127 195 5.6E-5 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00091 746 811 0.013 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00091 864 930 0.11 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00091 256 322 7.5E-6 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00091 376 442 1.9E-4 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00091 620 686 1.4E-10 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00091 498 566 9.5E-6 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SUPERFAMILY SSF55785 990 1097 2.42E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00086 202 244 4.5E-9 T 15-10-2018 IPR001610 PAC motif THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00086 448 486 0.0013 T 15-10-2018 IPR001610 PAC motif THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00086 936 977 5.7 T 15-10-2018 IPR001610 PAC motif THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00086 77 115 360.0 T 15-10-2018 IPR001610 PAC motif THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00086 812 852 33.0 T 15-10-2018 IPR001610 PAC motif THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00086 330 371 22.0 T 15-10-2018 IPR001610 PAC motif THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00086 1057 1099 7.9E-5 T 15-10-2018 IPR001610 PAC motif THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00086 692 734 3.0E-6 T 15-10-2018 IPR001610 PAC motif THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00086 568 608 290.0 T 15-10-2018 IPR001610 PAC motif THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Gene3D G3DSA:3.30.450.20 245 369 5.4E-22 T 15-10-2018 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Pfam PF13426 PAS domain 877 975 7.6E-8 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Pfam PF13426 PAS domain 269 369 1.2E-6 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Gene3D G3DSA:3.30.70.270 1104 1278 6.6E-65 T 15-10-2018 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SUPERFAMILY SSF55785 1 117 3.32E-6 T 15-10-2018 IPR035965 PAS domain superfamily THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SMART SM00267 1099 1271 9.3E-74 T 15-10-2018 IPR000160 GGDEF domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1109 1269 2.6E-44 T 15-10-2018 IPR000160 GGDEF domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 SUPERFAMILY SSF55073 1115 1273 2.94E-53 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Pfam PF08447 PAS fold 150 237 2.1E-26 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Pfam PF08447 PAS fold 401 473 4.6E-12 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 865 984 3.5E-16 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 742 859 6.6E-9 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 618 741 3.4E-21 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 375 492 2.2E-18 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 495 615 1.3E-11 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 990 1101 3.0E-19 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 252 377 3.9E-19 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 124 251 1.4E-16 T 15-10-2018 IPR000014 PAS domain THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Pfam PF08448 PAS fold 631 736 5.0E-10 T 15-10-2018 IPR013656 PAS fold-4 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Pfam PF08448 PAS fold 754 854 1.4E-5 T 15-10-2018 IPR013656 PAS fold-4 THII_2976 90dd9b32783c632fb8bd50e5b10d93cf 1278 Pfam PF08448 PAS fold 504 610 1.1E-7 T 15-10-2018 IPR013656 PAS fold-4 THII_1929 1980dfcb9f1304bb03453d61c1e5ca92 362 Pfam PF00072 Response regulator receiver domain 8 100 1.2E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1929 1980dfcb9f1304bb03453d61c1e5ca92 362 PIRSF PIRSF000876 1 345 2.5E-95 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 THII_1929 1980dfcb9f1304bb03453d61c1e5ca92 362 Pfam PF01339 CheB methylesterase 161 337 5.2E-54 T 15-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 THII_1929 1980dfcb9f1304bb03453d61c1e5ca92 362 SUPERFAMILY SSF52738 158 342 1.57E-58 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal THII_1929 1980dfcb9f1304bb03453d61c1e5ca92 362 SMART SM00448 1 113 1.8E-5 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1929 1980dfcb9f1304bb03453d61c1e5ca92 362 Gene3D G3DSA:3.40.50.180 151 345 6.4E-60 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal THII_1929 1980dfcb9f1304bb03453d61c1e5ca92 362 SUPERFAMILY SSF52172 7 100 1.11E-17 T 15-10-2018 IPR011006 CheY-like superfamily THII_1929 1980dfcb9f1304bb03453d61c1e5ca92 362 Gene3D G3DSA:3.40.50.2300 6 130 2.2E-20 T 15-10-2018 THII_1929 1980dfcb9f1304bb03453d61c1e5ca92 362 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 342 30.101 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 THII_3389 7aa2f90821aadc0323970d86f6a50c8c 158 SUPERFAMILY SSF53927 5 149 3.9E-44 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 THII_3389 7aa2f90821aadc0323970d86f6a50c8c 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 103 4.9E-27 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain THII_3389 7aa2f90821aadc0323970d86f6a50c8c 158 Gene3D G3DSA:3.40.140.10 4 158 7.2E-59 T 15-10-2018 THII_3389 7aa2f90821aadc0323970d86f6a50c8c 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 THII_0393 39e8e5b2ebbdf7d4eeb9b8e91be6f63a 157 SUPERFAMILY SSF55083 1 145 1.06E-40 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 THII_0393 39e8e5b2ebbdf7d4eeb9b8e91be6f63a 157 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 1 123 8.0E-24 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 THII_0393 39e8e5b2ebbdf7d4eeb9b8e91be6f63a 157 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 2 123 7.7E-28 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 THII_0393 39e8e5b2ebbdf7d4eeb9b8e91be6f63a 157 Gene3D G3DSA:3.30.70.560 1 149 4.5E-34 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 TIGRFAM TIGR01686 FkbH: FkbH domain 586 907 6.2E-88 T 15-10-2018 IPR010037 FkbH domain THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2623 2638 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF05050 Methyltransferase FkbM domain 243 436 8.1E-13 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.40.47.10 2874 3455 2.6E-216 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:1.10.1200.10 3485 3564 3.1E-13 T 15-10-2018 IPR036736 ACP-like superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF52096 2112 2280 8.12E-8 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:1.10.1200.10 2718 2804 1.3E-27 T 15-10-2018 IPR036736 ACP-like superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.90.226.10 1819 2047 2.5E-24 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.90.226.10 2298 2539 6.2E-53 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.90.226.10 2075 2293 7.5E-9 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.40.47.10 1149 1746 1.1E-220 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF00378 Enoyl-CoA hydratase/isomerase 1844 2046 1.3E-20 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF00378 Enoyl-CoA hydratase/isomerase 2328 2552 6.8E-48 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:1.10.1200.10 1004 1084 4.6E-14 T 15-10-2018 IPR036736 ACP-like superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SMART SM01294 2598 2664 1.1E-34 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SMART SM01294 1019 1077 4.8E-4 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SMART SM01294 2722 2788 7.1E-37 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF00550 Phosphopantetheine attachment site 3496 3560 4.4E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF00550 Phosphopantetheine attachment site 2723 2788 1.0E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF00550 Phosphopantetheine attachment site 2599 2664 5.4E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF00550 Phosphopantetheine attachment site 1012 1077 1.7E-10 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF00668 Condensation domain 3595 4039 4.5E-31 T 15-10-2018 IPR001242 Condensation domain THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF00668 Condensation domain 4082 4467 1.3E-26 T 15-10-2018 IPR001242 Condensation domain THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF14765 Polyketide synthase dehydratase 9 106 2.0E-12 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:1.10.1200.10 2578 2674 8.9E-25 T 15-10-2018 IPR036736 ACP-like superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1147 1395 4.4E-90 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2873 3118 1.1E-81 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF47336 3495 3603 1.01E-10 T 15-10-2018 IPR036736 ACP-like superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF52777 3772 4029 5.56E-33 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 240 417 3.6E-21 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 2413 2433 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF47336 1004 1082 2.22E-12 T 15-10-2018 IPR036736 ACP-like superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SMART SM00823 Phosphopantetheine attachment site 2596 2668 7.1E-9 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SMART SM00823 Phosphopantetheine attachment site 1010 1081 0.0031 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SMART SM00823 Phosphopantetheine attachment site 2720 2792 6.1E-10 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SMART SM00823 Phosphopantetheine attachment site 3493 3564 1.1E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF53335 201 438 3.16E-29 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3031 3047 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF47336 2717 2801 1.15E-14 T 15-10-2018 IPR036736 ACP-like superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF47336 2594 2683 1.1E-13 T 15-10-2018 IPR036736 ACP-like superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2747 2762 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF53901 1143 1513 2.88E-89 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.10.129.110 4 110 3.1E-17 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SMART SM00825 Beta-ketoacyl synthase 1149 1574 2.5E-185 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SMART SM00825 Beta-ketoacyl synthase 2874 3297 7.3E-174 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF52096 1841 2038 3.27E-22 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.30.559.30 3770 4028 1.1E-62 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.30.559.30 4229 4477 4.7E-60 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.30.70.3050 1628 1735 1.1E-220 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.30.70.3050 3353 3444 2.6E-216 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1403 1520 5.2E-39 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3127 3243 7.6E-36 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF52777 3588 3785 2.11E-20 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF56784 587 705 4.88E-8 T 15-10-2018 IPR036412 HAD-like superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF52096 2319 2552 1.42E-41 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 588 705 1.0E-19 T 15-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.40.50.1000 586 745 7.0E-53 T 15-10-2018 IPR023214 HAD superfamily THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF53901 2868 3291 9.61E-84 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.30.559.10 3587 3767 1.7E-46 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Gene3D G3DSA:3.30.559.10 4046 4226 1.3E-42 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF52777 4047 4242 9.23E-18 T 15-10-2018 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3251 3363 2.7E-10 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1524 1627 5.9E-11 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2201 a57e0b0a996be2f6cf28468e8d255852 4490 SUPERFAMILY SSF52777 4231 4471 5.23E-31 T 15-10-2018 THII_3936 0ac7d51b2be5c1d1168988aed4dad6c8 89 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 89 3.3E-11 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family THII_3936 0ac7d51b2be5c1d1168988aed4dad6c8 89 Gene3D G3DSA:3.30.2310.20 1 89 5.7E-12 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_3936 0ac7d51b2be5c1d1168988aed4dad6c8 89 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 7 88 1.2E-7 T 15-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin THII_3936 0ac7d51b2be5c1d1168988aed4dad6c8 89 SUPERFAMILY SSF143011 1 89 4.05E-20 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1195 bbb034418b5e9cc93ee770776246178f 361 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.3E-5 T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_1195 bbb034418b5e9cc93ee770776246178f 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_1195 bbb034418b5e9cc93ee770776246178f 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 4.7E-132 T 15-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_1195 bbb034418b5e9cc93ee770776246178f 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_1195 bbb034418b5e9cc93ee770776246178f 361 Pfam PF00953 Glycosyl transferase family 4 99 284 1.0E-35 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 THII_1195 bbb034418b5e9cc93ee770776246178f 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.712 T 15-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_3562 94d4b48d6e53ff529b0433dbf5d3ce9d 514 Gene3D G3DSA:3.30.160.740 392 447 1.1E-13 T 15-10-2018 THII_3562 94d4b48d6e53ff529b0433dbf5d3ce9d 514 Pfam PF00682 HMGL-like 9 276 5.0E-55 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 THII_3562 94d4b48d6e53ff529b0433dbf5d3ce9d 514 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 16 32 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3562 94d4b48d6e53ff529b0433dbf5d3ce9d 514 SUPERFAMILY SSF110921 392 510 1.02E-13 T 15-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3562 94d4b48d6e53ff529b0433dbf5d3ce9d 514 SMART SM00917 371 511 7.0E-13 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3562 94d4b48d6e53ff529b0433dbf5d3ce9d 514 SUPERFAMILY SSF51569 9 294 2.2E-67 T 15-10-2018 THII_3562 94d4b48d6e53ff529b0433dbf5d3ce9d 514 Gene3D G3DSA:3.20.20.70 8 326 2.3E-104 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3562 94d4b48d6e53ff529b0433dbf5d3ce9d 514 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 205 218 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3562 94d4b48d6e53ff529b0433dbf5d3ce9d 514 Gene3D G3DSA:3.30.160.340 449 513 8.9E-24 T 15-10-2018 THII_3562 94d4b48d6e53ff529b0433dbf5d3ce9d 514 Pfam PF08502 LeuA allosteric (dimerisation) domain 372 510 1.8E-23 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3815 f741a70baa04b8bcf3cdbbef884c03a2 216 Gene3D G3DSA:3.30.420.10 26 210 2.0E-29 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 THII_3815 f741a70baa04b8bcf3cdbbef884c03a2 216 Pfam PF00929 Exonuclease 32 196 9.8E-19 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_3815 f741a70baa04b8bcf3cdbbef884c03a2 216 SUPERFAMILY SSF53098 26 204 3.36E-31 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_3815 f741a70baa04b8bcf3cdbbef884c03a2 216 SMART SM00479 30 207 2.8E-21 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_0596 3e67c954ed70bc522bd7f9b745df8841 379 Pfam PF01872 RibD C-terminal domain 153 369 4.1E-49 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 THII_0596 3e67c954ed70bc522bd7f9b745df8841 379 PIRSF PIRSF006769 5 376 2.0E-126 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 THII_0596 3e67c954ed70bc522bd7f9b745df8841 379 Gene3D G3DSA:3.40.430.10 142 376 9.3E-69 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 THII_0596 3e67c954ed70bc522bd7f9b745df8841 379 Gene3D G3DSA:3.40.140.10 5 141 5.4E-46 T 15-10-2018 THII_0596 3e67c954ed70bc522bd7f9b745df8841 379 SUPERFAMILY SSF53927 9 150 9.03E-48 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 THII_0596 3e67c954ed70bc522bd7f9b745df8841 379 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 106 4.3E-21 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain THII_0596 3e67c954ed70bc522bd7f9b745df8841 379 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 13 370 1.2E-118 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 THII_0596 3e67c954ed70bc522bd7f9b745df8841 379 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 373 3.1E-63 T 15-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 THII_0596 3e67c954ed70bc522bd7f9b745df8841 379 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 94 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 THII_0596 3e67c954ed70bc522bd7f9b745df8841 379 SUPERFAMILY SSF53597 151 372 1.96E-57 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 THII_1061 7c327f8d99fbad2df329545990ccab03 299 SUPERFAMILY SSF53335 89 228 1.55E-21 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1061 7c327f8d99fbad2df329545990ccab03 299 Pfam PF13489 Methyltransferase domain 82 196 9.8E-13 T 15-10-2018 THII_1061 7c327f8d99fbad2df329545990ccab03 299 Gene3D G3DSA:3.40.50.150 49 248 8.4E-24 T 15-10-2018 THII_0839 7342a2f17e06f8bd5178f893598a14c0 393 SUPERFAMILY SSF53901 4 270 2.76E-88 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_0839 7342a2f17e06f8bd5178f893598a14c0 393 PIRSF PIRSF000429 1 393 3.9E-128 T 15-10-2018 IPR002155 Thiolase GO:0016747 THII_0839 7342a2f17e06f8bd5178f893598a14c0 393 Gene3D G3DSA:3.40.47.10 6 276 8.5E-158 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_0839 7342a2f17e06f8bd5178f893598a14c0 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 8.7E-52 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 THII_0839 7342a2f17e06f8bd5178f893598a14c0 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 4.2E-147 T 15-10-2018 IPR002155 Thiolase GO:0016747 THII_0839 7342a2f17e06f8bd5178f893598a14c0 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 THII_0839 7342a2f17e06f8bd5178f893598a14c0 393 Gene3D G3DSA:3.40.47.10 126 389 8.5E-158 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_0839 7342a2f17e06f8bd5178f893598a14c0 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 THII_0839 7342a2f17e06f8bd5178f893598a14c0 393 SUPERFAMILY SSF53901 271 391 4.54E-45 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_0839 7342a2f17e06f8bd5178f893598a14c0 393 Pfam PF00108 Thiolase, N-terminal domain 4 263 6.6E-102 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 THII_0839 7342a2f17e06f8bd5178f893598a14c0 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 THII_2675 338b3cb819c930ac83903fe4a8b88d86 169 Pfam PF02036 SCP-2 sterol transfer family 43 131 3.0E-9 T 15-10-2018 IPR003033 SCP2 sterol-binding domain THII_2675 338b3cb819c930ac83903fe4a8b88d86 169 SUPERFAMILY SSF55718 32 135 3.24E-13 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SUPERFAMILY SSF55785 744 856 4.54E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Gene3D G3DSA:3.30.450.20 979 1094 2.5E-15 T 15-10-2018 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Gene3D G3DSA:3.30.450.20 359 471 4.9E-17 T 15-10-2018 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SUPERFAMILY SSF55785 473 596 4.54E-16 T 15-10-2018 IPR035965 PAS domain superfamily THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SUPERFAMILY SSF55785 4 100 3.07E-11 T 15-10-2018 IPR035965 PAS domain superfamily THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Pfam PF13188 PAS domain 488 532 2.1E-6 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Pfam PF13426 PAS domain 379 474 1.7E-8 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Pfam PF13426 PAS domain 115 224 4.1E-6 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Gene3D G3DSA:2.10.70.100 311 358 3.5E-13 T 15-10-2018 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SUPERFAMILY SSF55785 595 723 4.51E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Gene3D G3DSA:3.30.450.20 115 239 9.6E-14 T 15-10-2018 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SUPERFAMILY SSF55785 353 473 6.46E-15 T 15-10-2018 IPR035965 PAS domain superfamily THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Gene3D G3DSA:3.30.450.20 735 858 2.4E-24 T 15-10-2018 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Gene3D G3DSA:3.30.450.20 486 609 1.2E-17 T 15-10-2018 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Pfam PF00989 PAS fold 1135 1227 5.1E-8 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Pfam PF00989 PAS fold 983 1061 3.1E-8 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Pfam PF00989 PAS fold 735 844 1.1E-11 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SUPERFAMILY SSF55785 252 358 2.09E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00086 183 226 140.0 T 15-10-2018 IPR001610 PAC motif THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00086 805 847 0.029 T 15-10-2018 IPR001610 PAC motif THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00086 434 475 27.0 T 15-10-2018 IPR001610 PAC motif THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00086 683 725 0.014 T 15-10-2018 IPR001610 PAC motif THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00086 61 100 330.0 T 15-10-2018 IPR001610 PAC motif THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00086 314 356 7.8E-9 T 15-10-2018 IPR001610 PAC motif THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00086 556 598 500.0 T 15-10-2018 IPR001610 PAC motif THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Pfam PF08448 PAS fold 616 726 2.8E-7 T 15-10-2018 IPR013656 PAS fold-4 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Pfam PF08447 PAS fold 262 350 2.9E-20 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Pfam PF08447 PAS fold 13 79 3.4E-6 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 102 9.1E-8 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 365 482 7.0E-16 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 114 233 8.3E-6 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 607 731 5.7E-13 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 861 977 1.1E-6 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 484 605 1.5E-15 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1119 1229 7.7E-15 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 980 1052 5.7E-11 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 733 852 2.0E-16 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 258 363 1.4E-12 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Gene3D G3DSA:3.30.450.20 4 114 1.7E-12 T 15-10-2018 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Pfam PF13596 PAS domain 862 969 7.6E-7 T 15-10-2018 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SUPERFAMILY SSF55785 967 1082 1.11E-19 T 15-10-2018 IPR035965 PAS domain superfamily THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SUPERFAMILY SSF55785 844 969 9.6E-12 T 15-10-2018 IPR035965 PAS domain superfamily THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SUPERFAMILY SSF55785 115 235 5.72E-13 T 15-10-2018 IPR035965 PAS domain superfamily THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SUPERFAMILY SSF55785 1112 1231 5.31E-17 T 15-10-2018 IPR035965 PAS domain superfamily THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Gene3D G3DSA:3.30.450.20 859 978 1.2E-15 T 15-10-2018 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Gene3D G3DSA:3.30.450.20 1110 1233 2.2E-16 T 15-10-2018 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Gene3D G3DSA:3.30.450.20 249 308 2.5E-15 T 15-10-2018 THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00091 983 1050 4.2E-7 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00091 487 555 1.3E-5 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00091 240 307 2.3 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00091 368 437 1.0E-5 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00091 610 677 2.3E-4 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00091 1123 1190 5.9E-10 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00091 1 55 140.0 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00091 104 174 0.19 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00091 859 923 36.0 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 SMART SM00091 733 799 6.7E-7 T 15-10-2018 IPR000014 PAS domain THII_2968 14a75561a33cae67b436bf8b331de0d6 1238 Gene3D G3DSA:3.30.450.20 610 734 1.2E-17 T 15-10-2018 THII_1367 7478bf85860da310c8fffec970f0e27b 377 Gene3D G3DSA:3.30.360.10 138 317 5.2E-7 T 15-10-2018 THII_1367 7478bf85860da310c8fffec970f0e27b 377 Gene3D G3DSA:3.40.50.720 2 122 6.9E-18 T 15-10-2018 THII_1367 7478bf85860da310c8fffec970f0e27b 377 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 6 109 2.8E-13 T 15-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 THII_1367 7478bf85860da310c8fffec970f0e27b 377 SUPERFAMILY SSF51735 1 143 1.41E-16 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0985 b62d1b4064c3d2cabc7d92df2ce40dfe 354 Pfam PF01565 FAD binding domain 7 134 2.6E-20 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 THII_0985 b62d1b4064c3d2cabc7d92df2ce40dfe 354 Gene3D G3DSA:3.30.465.10 52 170 3.1E-32 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_0985 b62d1b4064c3d2cabc7d92df2ce40dfe 354 SUPERFAMILY SSF55103 187 351 9.48E-14 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 THII_0985 b62d1b4064c3d2cabc7d92df2ce40dfe 354 SUPERFAMILY SSF56176 7 172 2.24E-29 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 THII_1721 9bb872d7b5370489941eb237a11db15d 401 Gene3D G3DSA:1.20.81.30 254 365 3.0E-21 T 15-10-2018 THII_1721 9bb872d7b5370489941eb237a11db15d 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 381 400 7.5E-13 T 15-10-2018 IPR003004 GspF/PilC family THII_1721 9bb872d7b5370489941eb237a11db15d 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 365 379 7.5E-13 T 15-10-2018 IPR003004 GspF/PilC family THII_1721 9bb872d7b5370489941eb237a11db15d 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 162 190 7.5E-13 T 15-10-2018 IPR003004 GspF/PilC family THII_1721 9bb872d7b5370489941eb237a11db15d 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 63 75 7.5E-13 T 15-10-2018 IPR003004 GspF/PilC family THII_1721 9bb872d7b5370489941eb237a11db15d 401 Gene3D G3DSA:1.20.81.30 55 169 2.4E-16 T 15-10-2018 THII_1721 9bb872d7b5370489941eb237a11db15d 401 Pfam PF00482 Type II secretion system (T2SS), protein F 272 391 1.1E-21 T 15-10-2018 IPR018076 Type II secretion system F domain THII_1721 9bb872d7b5370489941eb237a11db15d 401 Pfam PF00482 Type II secretion system (T2SS), protein F 68 190 3.1E-21 T 15-10-2018 IPR018076 Type II secretion system F domain THII_2368 35030621d0602ef16ee703c01e7b0398 118 SUPERFAMILY SSF74731 2 115 5.23E-48 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2368 35030621d0602ef16ee703c01e7b0398 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.232 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2368 35030621d0602ef16ee703c01e7b0398 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.8E-39 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2368 35030621d0602ef16ee703c01e7b0398 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.8E-39 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2368 35030621d0602ef16ee703c01e7b0398 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.8E-39 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2368 35030621d0602ef16ee703c01e7b0398 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 9.0E-18 T 15-10-2018 THII_2368 35030621d0602ef16ee703c01e7b0398 118 Gene3D G3DSA:1.10.720.90 2 55 1.9E-24 T 15-10-2018 THII_2368 35030621d0602ef16ee703c01e7b0398 118 Gene3D G3DSA:1.10.1900.20 56 118 3.4E-27 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2368 35030621d0602ef16ee703c01e7b0398 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.4E-48 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2368 35030621d0602ef16ee703c01e7b0398 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2368 35030621d0602ef16ee703c01e7b0398 118 Pfam PF00453 Ribosomal protein L20 3 108 1.6E-47 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2652 1e779d870c1b2ccd62f3cde616018613 228 Pfam PF09335 SNARE associated Golgi protein 48 173 4.2E-26 T 15-10-2018 IPR032816 SNARE associated Golgi protein THII_1847 678b30cf7dcf0563c25e98188baf8226 488 Gene3D G3DSA:3.30.565.10 320 478 7.1E-25 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1847 678b30cf7dcf0563c25e98188baf8226 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 479 1.7E-12 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1847 678b30cf7dcf0563c25e98188baf8226 488 SMART SM00387 365 481 1.4E-11 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1847 678b30cf7dcf0563c25e98188baf8226 488 Gene3D G3DSA:1.10.287.130 263 319 7.1E-25 T 15-10-2018 THII_1847 678b30cf7dcf0563c25e98188baf8226 488 SUPERFAMILY SSF47384 244 316 7.26E-6 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1847 678b30cf7dcf0563c25e98188baf8226 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 7.2E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1847 678b30cf7dcf0563c25e98188baf8226 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 7.2E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1847 678b30cf7dcf0563c25e98188baf8226 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 7.2E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1847 678b30cf7dcf0563c25e98188baf8226 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 7.2E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1847 678b30cf7dcf0563c25e98188baf8226 488 SMART SM00448 5 117 8.2E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1847 678b30cf7dcf0563c25e98188baf8226 488 SUPERFAMILY SSF52172 3 128 5.41E-27 T 15-10-2018 IPR011006 CheY-like superfamily THII_1847 678b30cf7dcf0563c25e98188baf8226 488 Pfam PF00072 Response regulator receiver domain 8 117 1.4E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1847 678b30cf7dcf0563c25e98188baf8226 488 SUPERFAMILY SSF55874 361 479 2.23E-21 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1847 678b30cf7dcf0563c25e98188baf8226 488 Gene3D G3DSA:3.40.50.12740 4 178 1.7E-29 T 15-10-2018 THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 SUPERFAMILY SSF54211 462 582 3.29E-39 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 Pfam PF03764 Elongation factor G, domain IV 462 581 3.1E-39 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 Gene3D G3DSA:3.30.230.10 467 670 1.2E-80 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 Pfam PF00009 Elongation factor Tu GTP binding domain 8 261 2.2E-34 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 Gene3D G3DSA:3.40.50.300 3 265 2.2E-54 T 15-10-2018 THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 SMART SM00838 583 671 4.9E-34 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 Pfam PF14492 Elongation Factor G, domain II 387 460 1.1E-19 T 15-10-2018 THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 SUPERFAMILY SSF54980 586 676 1.39E-27 T 15-10-2018 IPR035647 EF-G domain III/V-like THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 SUPERFAMILY SSF52540 5 261 1.82E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 SUPERFAMILY SSF50447 244 378 4.5E-23 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 SMART SM00889 463 581 1.8E-57 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 Gene3D G3DSA:3.30.70.870 389 466 2.8E-20 T 15-10-2018 THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 SUPERFAMILY SSF54980 387 465 1.29E-17 T 15-10-2018 IPR035647 EF-G domain III/V-like THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 Gene3D G3DSA:2.40.30.10 274 388 9.5E-22 T 15-10-2018 THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 Gene3D G3DSA:3.30.70.240 587 658 1.2E-80 T 15-10-2018 THII_3006 c8bfb439adfda35eac3cf6e740ebfb59 682 Pfam PF00679 Elongation factor G C-terminus 584 670 6.0E-29 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like THII_2110 9b34a38767de6c6ad213ed4ecdcb88d3 260 Pfam PF02405 Permease MlaE 44 254 2.5E-73 T 15-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 THII_2110 9b34a38767de6c6ad213ed4ecdcb88d3 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 6 257 6.3E-89 T 15-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria THII_2629 166b10b360ca7bd0e71f0b35c4f3c168 112 PRINTS PR00355 Adrenodoxin signature 42 52 1.1E-9 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 THII_2629 166b10b360ca7bd0e71f0b35c4f3c168 112 PRINTS PR00355 Adrenodoxin signature 60 74 1.1E-9 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 THII_2629 166b10b360ca7bd0e71f0b35c4f3c168 112 PRINTS PR00355 Adrenodoxin signature 83 91 1.1E-9 T 15-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 THII_2629 166b10b360ca7bd0e71f0b35c4f3c168 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 91 6.1E-14 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 THII_2629 166b10b360ca7bd0e71f0b35c4f3c168 112 SUPERFAMILY SSF54292 6 106 5.4E-31 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 THII_2629 166b10b360ca7bd0e71f0b35c4f3c168 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 3 110 1.0E-55 T 15-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 THII_2629 166b10b360ca7bd0e71f0b35c4f3c168 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 15-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 THII_2629 166b10b360ca7bd0e71f0b35c4f3c168 112 Gene3D G3DSA:3.10.20.30 1 112 3.2E-36 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_1875 206cccfe8f77767e87ed54b5b40b5069 372 SUPERFAMILY SSF54966 4 110 3.14E-11 T 15-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_1875 206cccfe8f77767e87ed54b5b40b5069 372 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 116 351 2.2E-32 T 15-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_1875 206cccfe8f77767e87ed54b5b40b5069 372 Gene3D G3DSA:3.20.20.110 111 371 1.4E-92 T 15-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_1875 206cccfe8f77767e87ed54b5b40b5069 372 Gene3D G3DSA:3.30.70.150 1 110 2.8E-32 T 15-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_1875 206cccfe8f77767e87ed54b5b40b5069 372 SUPERFAMILY SSF51649 110 353 1.23E-73 T 15-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_0542 032baaa22cd4b23809fe58603e4b4160 403 ProSitePatterns PS00452 Guanylate cyclase signature. 333 356 - T 15-10-2018 IPR018297 Adenylyl cyclase class-4/guanylyl cyclase, conserved site GO:0009190|GO:0016849|GO:0035556 THII_0542 032baaa22cd4b23809fe58603e4b4160 403 SMART SM00448 44 157 2.0E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0542 032baaa22cd4b23809fe58603e4b4160 403 Pfam PF00072 Response regulator receiver domain 47 157 9.4E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0542 032baaa22cd4b23809fe58603e4b4160 403 Gene3D G3DSA:3.40.50.2300 41 189 2.8E-40 T 15-10-2018 THII_0542 032baaa22cd4b23809fe58603e4b4160 403 SMART SM00044 193 382 4.9E-71 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_0542 032baaa22cd4b23809fe58603e4b4160 403 SUPERFAMILY SSF52172 43 197 8.25E-42 T 15-10-2018 IPR011006 CheY-like superfamily THII_0542 032baaa22cd4b23809fe58603e4b4160 403 SUPERFAMILY SSF55073 214 398 2.67E-66 T 15-10-2018 IPR029787 Nucleotide cyclase THII_0542 032baaa22cd4b23809fe58603e4b4160 403 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 223 400 2.2E-66 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_0542 032baaa22cd4b23809fe58603e4b4160 403 Gene3D G3DSA:3.30.70.1230 216 403 3.8E-77 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1618 72f679cd62c61b5e1d480ab510fea0c3 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 135 211 6.2E-11 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1618 72f679cd62c61b5e1d480ab510fea0c3 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 222 299 7.6E-12 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1618 72f679cd62c61b5e1d480ab510fea0c3 308 Gene3D G3DSA:1.10.760.10 190 279 1.1E-74 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1618 72f679cd62c61b5e1d480ab510fea0c3 308 SUPERFAMILY SSF46626 220 305 4.52E-25 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1618 72f679cd62c61b5e1d480ab510fea0c3 308 Gene3D G3DSA:1.20.58.1490 8 102 7.6E-33 T 15-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily THII_1618 72f679cd62c61b5e1d480ab510fea0c3 308 Gene3D G3DSA:1.10.760.10 111 302 1.1E-74 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1618 72f679cd62c61b5e1d480ab510fea0c3 308 SUPERFAMILY SSF46626 64 220 2.47E-28 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1618 72f679cd62c61b5e1d480ab510fea0c3 308 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 46 91 6.2E-22 T 15-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal THII_1618 72f679cd62c61b5e1d480ab510fea0c3 308 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 39 305 4.3E-87 T 15-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III THII_1618 72f679cd62c61b5e1d480ab510fea0c3 308 PIRSF PIRSF000006 8 306 2.7E-101 T 15-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III THII_0611 9905a4390f95cfc74f5e61ccddb9c650 421 Gene3D G3DSA:3.30.70.2500 59 157 3.2E-41 T 15-10-2018 THII_0611 9905a4390f95cfc74f5e61ccddb9c650 421 Gene3D G3DSA:3.30.413.10 158 396 7.7E-107 T 15-10-2018 THII_0611 9905a4390f95cfc74f5e61ccddb9c650 421 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 160 380 8.6E-35 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_0611 9905a4390f95cfc74f5e61ccddb9c650 421 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 88 151 1.3E-9 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_0611 9905a4390f95cfc74f5e61ccddb9c650 421 SUPERFAMILY SSF55124 6 160 2.62E-61 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_0611 9905a4390f95cfc74f5e61ccddb9c650 421 TIGRFAM TIGR02064 dsrA: sulfite reductase, dissimilatory-type alpha subunit 11 413 7.5E-177 T 15-10-2018 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit GO:0018551|GO:0020037|GO:0051539|GO:0055114 THII_0611 9905a4390f95cfc74f5e61ccddb9c650 421 SUPERFAMILY SSF54862 221 299 1.07E-14 T 15-10-2018 THII_0611 9905a4390f95cfc74f5e61ccddb9c650 421 SUPERFAMILY SSF56014 162 416 4.91E-51 T 15-10-2018 THII_0611 9905a4390f95cfc74f5e61ccddb9c650 421 Gene3D G3DSA:3.30.70.20 232 310 7.7E-107 T 15-10-2018 THII_3656 058bcf4e71e203af0753b76ea999cf35 140 SUPERFAMILY SSF52402 1 140 9.21E-29 T 15-10-2018 THII_3656 058bcf4e71e203af0753b76ea999cf35 140 Pfam PF00582 Universal stress protein family 1 140 1.1E-25 T 15-10-2018 IPR006016 UspA THII_3656 058bcf4e71e203af0753b76ea999cf35 140 PIRSF PIRSF006276 1 140 7.2E-18 T 15-10-2018 IPR006015 Universal stress protein A THII_3656 058bcf4e71e203af0753b76ea999cf35 140 PRINTS PR01438 Universal stress protein signature 2 20 1.5E-14 T 15-10-2018 IPR006015 Universal stress protein A THII_3656 058bcf4e71e203af0753b76ea999cf35 140 PRINTS PR01438 Universal stress protein signature 100 112 1.5E-14 T 15-10-2018 IPR006015 Universal stress protein A THII_3656 058bcf4e71e203af0753b76ea999cf35 140 PRINTS PR01438 Universal stress protein signature 118 140 1.5E-14 T 15-10-2018 IPR006015 Universal stress protein A THII_3656 058bcf4e71e203af0753b76ea999cf35 140 Gene3D G3DSA:3.40.50.620 1 140 3.5E-29 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 SMART SM00388 337 401 1.3E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 Pfam PF00512 His Kinase A (phospho-acceptor) domain 337 399 2.2E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 Pfam PF00672 HAMP domain 284 333 4.1E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 SUPERFAMILY SSF55874 390 555 1.03E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 Gene3D G3DSA:1.10.287.130 336 400 6.5E-15 T 15-10-2018 THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 Gene3D G3DSA:3.30.565.10 406 558 1.9E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 SMART SM00387 446 558 2.4E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 447 556 4.0E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 Gene3D G3DSA:1.20.1480.50 251 335 2.8E-12 T 15-10-2018 THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 SMART SM00304 284 336 5.5E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 536 1.1E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 497 1.1E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 511 1.1E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 SUPERFAMILY SSF47384 320 398 1.86E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1625 0783d3fd517d3e1d217a59e0783a7f9b 558 SUPERFAMILY SSF158472 284 333 9.02E-9 T 15-10-2018 THII_1025 470719e58fcfc450fa4237f4b88307b9 231 Gene3D G3DSA:3.60.15.10 11 230 8.8E-60 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_1025 470719e58fcfc450fa4237f4b88307b9 231 Pfam PF00753 Metallo-beta-lactamase superfamily 20 183 2.0E-19 T 15-10-2018 IPR001279 Metallo-beta-lactamase THII_1025 470719e58fcfc450fa4237f4b88307b9 231 SUPERFAMILY SSF56281 20 211 3.94E-46 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_1025 470719e58fcfc450fa4237f4b88307b9 231 SMART SM00849 20 183 7.1E-31 T 15-10-2018 IPR001279 Metallo-beta-lactamase THII_2293 a957a4bbd28ec2dc8a5ccaa7cef58538 257 SUPERFAMILY SSF48613 122 255 3.06E-9 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 THII_2293 a957a4bbd28ec2dc8a5ccaa7cef58538 257 Pfam PF11251 Protein of unknown function (DUF3050) 17 251 2.4E-87 T 15-10-2018 IPR024423 Protein of unknown function DUF3050 THII_2293 a957a4bbd28ec2dc8a5ccaa7cef58538 257 Gene3D G3DSA:1.20.910.10 14 255 1.4E-41 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 Gene3D G3DSA:1.20.1640.10 10 500 0.0 T 15-10-2018 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 Pfam PF00873 AcrB/AcrD/AcrF family 4 1007 0.0 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 SUPERFAMILY SSF82693 553 653 9.42E-23 T 15-10-2018 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 Gene3D G3DSA:3.30.70.1440 653 847 0.0 T 15-10-2018 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 Gene3D G3DSA:3.30.70.1320 134 325 0.0 T 15-10-2018 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 Gene3D G3DSA:3.30.70.1430 555 652 0.0 T 15-10-2018 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 SUPERFAMILY SSF82693 137 323 3.92E-22 T 15-10-2018 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 SUPERFAMILY SSF82714 182 265 4.58E-20 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 SUPERFAMILY SSF82693 40 134 1.33E-25 T 15-10-2018 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 Gene3D G3DSA:3.30.70.1430 40 798 0.0 T 15-10-2018 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 SUPERFAMILY SSF82714 703 788 3.01E-19 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 Gene3D G3DSA:3.30.2090.10 702 790 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.0E-78 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 4.0E-78 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 4.0E-78 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 4.0E-78 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.0E-78 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.0E-78 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 PRINTS PR00702 Acriflavin resistance protein family signature 608 622 4.0E-78 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.0E-78 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.0E-78 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 SUPERFAMILY SSF82866 787 1012 3.66E-47 T 15-10-2018 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 SUPERFAMILY SSF82866 290 489 2.35E-50 T 15-10-2018 THII_3944 ddb123901ec302cce95fe6ca260c356e 1017 Gene3D G3DSA:1.20.1640.10 501 1004 0.0 T 15-10-2018 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 Gene3D G3DSA:3.40.50.1980 237 355 1.2E-113 T 15-10-2018 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 Pfam PF00815 Histidinol dehydrogenase 22 432 1.5E-147 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 PRINTS PR00083 Histidinol dehydrogenase signature 204 229 5.9E-82 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 5.9E-82 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 PRINTS PR00083 Histidinol dehydrogenase signature 139 165 5.9E-82 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 PRINTS PR00083 Histidinol dehydrogenase signature 367 385 5.9E-82 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 5.9E-82 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 PRINTS PR00083 Histidinol dehydrogenase signature 174 200 5.9E-82 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 5.9E-82 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 PRINTS PR00083 Histidinol dehydrogenase signature 326 351 5.9E-82 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 SUPERFAMILY SSF53720 29 433 6.87E-57 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 15-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 Gene3D G3DSA:3.40.50.1980 33 235 1.2E-113 T 15-10-2018 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 PIRSF PIRSF000099 1 435 1.9E-159 T 15-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 432 8.4E-143 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3404 a36eb57f762746c923fc0ae200acd2a9 435 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 433 36.619 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 THII_3825 54f87a0c400684b7406b7de33cf73e31 724 SUPERFAMILY SSF158472 375 425 2.48E-7 T 15-10-2018 THII_3825 54f87a0c400684b7406b7de33cf73e31 724 Pfam PF02743 Cache domain 51 338 3.4E-23 T 15-10-2018 IPR033479 Double Cache domain 1 THII_3825 54f87a0c400684b7406b7de33cf73e31 724 Gene3D G3DSA:3.30.565.10 576 724 7.6E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3825 54f87a0c400684b7406b7de33cf73e31 724 Gene3D G3DSA:3.30.450.20 127 225 5.7E-20 T 15-10-2018 THII_3825 54f87a0c400684b7406b7de33cf73e31 724 SUPERFAMILY SSF55874 570 720 3.54E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3825 54f87a0c400684b7406b7de33cf73e31 724 SMART SM00304 375 427 1.2E-5 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3825 54f87a0c400684b7406b7de33cf73e31 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 700 1.1E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3825 54f87a0c400684b7406b7de33cf73e31 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 706 719 1.1E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3825 54f87a0c400684b7406b7de33cf73e31 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 679 1.1E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3825 54f87a0c400684b7406b7de33cf73e31 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 665 1.1E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3825 54f87a0c400684b7406b7de33cf73e31 724 SMART SM00387 614 722 2.5E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3825 54f87a0c400684b7406b7de33cf73e31 724 Gene3D G3DSA:3.30.450.20 226 340 5.7E-20 T 15-10-2018 THII_3825 54f87a0c400684b7406b7de33cf73e31 724 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 617 721 2.1E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3825 54f87a0c400684b7406b7de33cf73e31 724 Gene3D G3DSA:1.20.1480.50 344 433 2.3E-10 T 15-10-2018 THII_2734 3326abb359adf860a5d275860f1944b2 327 SUPERFAMILY SSF111369 113 177 1.06E-6 T 15-10-2018 THII_2734 3326abb359adf860a5d275860f1944b2 327 Gene3D G3DSA:2.40.50.100 48 78 1.2E-10 T 15-10-2018 THII_2734 3326abb359adf860a5d275860f1944b2 327 Gene3D G3DSA:1.10.287.470 79 103 1.2E-10 T 15-10-2018 THII_2734 3326abb359adf860a5d275860f1944b2 327 Gene3D G3DSA:2.40.30.170 243 268 6.0E-10 T 15-10-2018 THII_2734 3326abb359adf860a5d275860f1944b2 327 Gene3D G3DSA:1.10.287.470 174 207 6.0E-10 T 15-10-2018 THII_2734 3326abb359adf860a5d275860f1944b2 327 Pfam PF13437 HlyD family secretion protein 208 317 1.2E-15 T 15-10-2018 THII_2734 3326abb359adf860a5d275860f1944b2 327 SUPERFAMILY SSF111369 181 252 2.88E-6 T 15-10-2018 THII_2734 3326abb359adf860a5d275860f1944b2 327 Gene3D G3DSA:1.10.287.470 109 172 1.3E-7 T 15-10-2018 THII_2734 3326abb359adf860a5d275860f1944b2 327 Pfam PF13533 Biotin-lipoyl like 48 92 1.8E-9 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain THII_2734 3326abb359adf860a5d275860f1944b2 327 SUPERFAMILY SSF111369 48 101 3.4E-7 T 15-10-2018 THII_2734 3326abb359adf860a5d275860f1944b2 327 Gene3D G3DSA:2.40.50.100 208 242 6.0E-10 T 15-10-2018 THII_3247 813a8a1ec9ff16a450b5fb07ee6bcc1c 68 Pfam PF05532 CsbD-like 7 56 4.3E-14 T 15-10-2018 IPR008462 CsbD-like domain THII_3247 813a8a1ec9ff16a450b5fb07ee6bcc1c 68 SUPERFAMILY SSF69047 7 67 2.62E-18 T 15-10-2018 IPR036629 YjbJ superfamily THII_3247 813a8a1ec9ff16a450b5fb07ee6bcc1c 68 Gene3D G3DSA:1.10.1470.10 5 65 1.0E-20 T 15-10-2018 IPR036629 YjbJ superfamily THII_1219 14672dd9d69644dec274eb2010d19d70 599 Gene3D G3DSA:1.10.1140.10 438 591 4.5E-38 T 15-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_1219 14672dd9d69644dec274eb2010d19d70 599 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 3 589 47.791 T 15-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_1219 14672dd9d69644dec274eb2010d19d70 599 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 216 437 2.8E-85 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_1219 14672dd9d69644dec274eb2010d19d70 599 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 85 206 1.2E-35 T 15-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_1219 14672dd9d69644dec274eb2010d19d70 599 Gene3D G3DSA:2.40.50.100 116 189 7.4E-163 T 15-10-2018 THII_1219 14672dd9d69644dec274eb2010d19d70 599 SUPERFAMILY SSF47917 450 543 2.2E-13 T 15-10-2018 THII_1219 14672dd9d69644dec274eb2010d19d70 599 Gene3D G3DSA:2.40.30.20 2 72 5.1E-20 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_1219 14672dd9d69644dec274eb2010d19d70 599 Gene3D G3DSA:3.40.50.300 73 437 7.4E-163 T 15-10-2018 THII_1219 14672dd9d69644dec274eb2010d19d70 599 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 428 437 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_1219 14672dd9d69644dec274eb2010d19d70 599 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 64 7.4E-6 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_1219 14672dd9d69644dec274eb2010d19d70 599 SUPERFAMILY SSF52540 167 443 1.87E-79 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1219 14672dd9d69644dec274eb2010d19d70 599 SUPERFAMILY SSF50615 6 71 1.02E-5 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.709 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 Gene3D G3DSA:3.40.50.720 6 259 4.0E-107 T 15-10-2018 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 8.1E-38 T 15-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 15-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.5E-81 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.5E-81 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.5E-81 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.5E-81 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.5E-81 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.5E-81 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.5E-81 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 Gene3D G3DSA:3.40.50.10860 8 276 4.0E-107 T 15-10-2018 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 282 1.1E-70 T 15-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 SUPERFAMILY SSF51735 123 282 4.52E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0420 267da7f3b6fbe464db480ad55e1527f1 283 SUPERFAMILY SSF53223 1 122 2.3E-37 T 15-10-2018 THII_2207 77525d8e7e80569840e8b77142650b19 342 TIGRFAM TIGR01686 FkbH: FkbH domain 6 313 1.6E-79 T 15-10-2018 IPR010037 FkbH domain THII_2207 77525d8e7e80569840e8b77142650b19 342 Gene3D G3DSA:3.40.50.1000 5 150 1.7E-36 T 15-10-2018 IPR023214 HAD superfamily THII_2207 77525d8e7e80569840e8b77142650b19 342 SUPERFAMILY SSF56784 4 111 1.22E-15 T 15-10-2018 IPR036412 HAD-like superfamily THII_2207 77525d8e7e80569840e8b77142650b19 342 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 7 114 1.3E-18 T 15-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC THII_2207 77525d8e7e80569840e8b77142650b19 342 SUPERFAMILY SSF55729 182 313 3.4E-5 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 SMART SM01264 462 710 1.4E-92 T 15-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 Pfam PF00675 Insulinase (Peptidase family M16) 53 138 3.9E-8 T 15-10-2018 IPR011765 Peptidase M16, N-terminal THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 SUPERFAMILY SSF63411 518 761 4.96E-61 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 SUPERFAMILY SSF63411 784 952 2.44E-37 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 SUPERFAMILY SSF63411 257 519 1.91E-53 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 SUPERFAMILY SSF63411 6 239 2.0E-47 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 Gene3D G3DSA:3.30.830.10 526 780 6.7E-114 T 15-10-2018 THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 Pfam PF05193 Peptidase M16 inactive domain 201 387 6.3E-14 T 15-10-2018 IPR007863 Peptidase M16, C-terminal THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 Gene3D G3DSA:3.30.830.10 495 942 6.7E-114 T 15-10-2018 THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 Gene3D G3DSA:3.30.830.10 1 249 6.3E-85 T 15-10-2018 THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 Pfam PF08367 Peptidase M16C associated 462 710 8.2E-70 T 15-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 THII_1688 396f8bb8ad5fe9c17fdf9465ec49d3ba 972 Gene3D G3DSA:3.30.830.10 252 484 3.1E-60 T 15-10-2018 THII_1196 3b95c1af4107d03f661abf9b88bd47b7 448 Gene3D G3DSA:3.40.1390.10 1 80 6.8E-24 T 15-10-2018 THII_1196 3b95c1af4107d03f661abf9b88bd47b7 448 Gene3D G3DSA:3.40.1190.10 81 310 3.7E-80 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_1196 3b95c1af4107d03f661abf9b88bd47b7 448 SUPERFAMILY SSF63418 1 97 1.12E-26 T 15-10-2018 IPR035911 MurE/MurF, N-terminal THII_1196 3b95c1af4107d03f661abf9b88bd47b7 448 Gene3D G3DSA:3.90.190.20 311 448 3.2E-40 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_1196 3b95c1af4107d03f661abf9b88bd47b7 448 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 444 1.9E-146 T 15-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_1196 3b95c1af4107d03f661abf9b88bd47b7 448 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 445 33.808 T 15-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_1196 3b95c1af4107d03f661abf9b88bd47b7 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 391 2.3E-12 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 THII_1196 3b95c1af4107d03f661abf9b88bd47b7 448 Pfam PF08245 Mur ligase middle domain 105 292 6.0E-53 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 THII_1196 3b95c1af4107d03f661abf9b88bd47b7 448 SUPERFAMILY SSF53623 100 311 3.66E-58 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_1196 3b95c1af4107d03f661abf9b88bd47b7 448 SUPERFAMILY SSF53244 312 444 3.66E-36 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_1196 3b95c1af4107d03f661abf9b88bd47b7 448 Pfam PF01225 Mur ligase family, catalytic domain 24 94 3.3E-11 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 THII_1469 bb2bf8ffb51c3864e732b07c62e9d7f7 474 Pfam PF01435 Peptidase family M48 82 250 4.1E-32 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 SMART SM00388 236 301 1.0E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 SUPERFAMILY SSF55874 290 457 6.02E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 SUPERFAMILY SSF47384 219 301 1.16E-17 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 SMART SM00387 347 458 3.0E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 457 2.5E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 Gene3D G3DSA:3.30.565.10 308 458 9.4E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 Pfam PF08521 Two-component sensor kinase N-terminal 20 158 2.1E-12 T 15-10-2018 IPR013727 Two-component sensor kinase, N-terminal THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 300 4.3E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 Gene3D G3DSA:1.10.287.130 185 302 4.5E-21 T 15-10-2018 THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 1.2E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 1.2E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3062 632cef98c222ff2c9a1e84ac1e4d4d25 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 1.2E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0585 ee2c06c4d62028814f02154f6ff2e6cf 302 SUPERFAMILY SSF110997 224 297 3.79E-9 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 THII_0585 ee2c06c4d62028814f02154f6ff2e6cf 302 Gene3D G3DSA:3.30.70.1070 220 295 1.3E-8 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 THII_0585 ee2c06c4d62028814f02154f6ff2e6cf 302 Pfam PF05036 Sporulation related domain 226 295 6.0E-7 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 THII_0956 6ce32033e3e3c93421a0c4d791d5ab1f 88 SUPERFAMILY SSF82185 15 85 8.37E-19 T 15-10-2018 THII_0956 6ce32033e3e3c93421a0c4d791d5ab1f 88 Gene3D G3DSA:2.20.110.10 32 88 4.6E-15 T 15-10-2018 THII_0956 6ce32033e3e3c93421a0c4d791d5ab1f 88 Pfam PF02493 MORN repeat 54 75 1.9E-8 T 15-10-2018 IPR003409 MORN motif THII_0956 6ce32033e3e3c93421a0c4d791d5ab1f 88 Pfam PF02493 MORN repeat 31 52 8.6E-4 T 15-10-2018 IPR003409 MORN motif THII_0956 6ce32033e3e3c93421a0c4d791d5ab1f 88 Pfam PF02493 MORN repeat 78 88 0.24 T 15-10-2018 IPR003409 MORN motif THII_0956 6ce32033e3e3c93421a0c4d791d5ab1f 88 SMART SM00698 29 50 0.18 T 15-10-2018 IPR003409 MORN motif THII_0956 6ce32033e3e3c93421a0c4d791d5ab1f 88 SMART SM00698 52 73 5.7E-5 T 15-10-2018 IPR003409 MORN motif THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 SMART SM00387 357 490 4.0E-33 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 SUPERFAMILY SSF47384 244 313 1.14E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 SMART SM00388 249 317 3.6E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 SUPERFAMILY SSF55874 308 488 1.31E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 488 8.3E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 SMART SM00304 187 239 0.0062 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 487 9.3E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 9.3E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 9.3E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 9.3E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 312 7.0E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 Gene3D G3DSA:3.30.565.10 318 490 1.1E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1121 9f53b723bfdd8c8fec7c17dbfb4cd13f 493 Gene3D G3DSA:1.10.287.130 227 312 1.3E-21 T 15-10-2018 THII_2442 7677a421ebd50b55a8229d0cd16e0b53 370 Pfam PF00072 Response regulator receiver domain 6 109 1.4E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2442 7677a421ebd50b55a8229d0cd16e0b53 370 SUPERFAMILY SSF52172 2 108 1.71E-28 T 15-10-2018 IPR011006 CheY-like superfamily THII_2442 7677a421ebd50b55a8229d0cd16e0b53 370 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 358 40.627 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 THII_2442 7677a421ebd50b55a8229d0cd16e0b53 370 SUPERFAMILY SSF52738 170 359 5.49E-72 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal THII_2442 7677a421ebd50b55a8229d0cd16e0b53 370 PIRSF PIRSF000876 1 362 5.3E-138 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 THII_2442 7677a421ebd50b55a8229d0cd16e0b53 370 Pfam PF01339 CheB methylesterase 175 353 7.0E-61 T 15-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 THII_2442 7677a421ebd50b55a8229d0cd16e0b53 370 Gene3D G3DSA:3.40.50.2300 1 133 1.1E-31 T 15-10-2018 THII_2442 7677a421ebd50b55a8229d0cd16e0b53 370 SMART SM00448 4 127 8.8E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2442 7677a421ebd50b55a8229d0cd16e0b53 370 Gene3D G3DSA:3.40.50.180 165 363 5.1E-77 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 Gene3D G3DSA:3.40.50.300 550 764 3.9E-88 T 15-10-2018 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 SUPERFAMILY SSF81923 4 156 5.69E-37 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 5.3E-11 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 4.4E-55 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 Gene3D G3DSA:1.10.1780.10 3 147 2.9E-28 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 15-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 Gene3D G3DSA:1.10.8.60 766 860 1.3E-25 T 15-10-2018 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 SMART SM01086 766 855 1.5E-34 T 15-10-2018 IPR019489 Clp ATPase, C-terminal THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 7.7E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 7.7E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 7.7E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 7.7E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 Gene3D G3DSA:3.40.50.300 148 342 2.0E-72 T 15-10-2018 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 SUPERFAMILY SSF52540 159 545 1.05E-98 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 SUPERFAMILY SSF52540 546 848 6.83E-81 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 144 1.9E-10 T 15-10-2018 IPR004176 Clp, N-terminal THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.0E-11 T 15-10-2018 IPR004176 Clp, N-terminal THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 Gene3D G3DSA:3.40.50.300 343 544 7.3E-72 T 15-10-2018 THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.1E-24 T 15-10-2018 IPR019489 Clp ATPase, C-terminal THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 SMART SM00382 198 343 3.8E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0001 c4973e9f358c5a51142aa6c37dbbc9bc 865 SMART SM00382 597 767 7.6E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1238 a85d9b24f3bcff5e44871d2bd58a0cd3 329 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 THII_1238 a85d9b24f3bcff5e44871d2bd58a0cd3 329 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 3.5E-109 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 THII_1238 a85d9b24f3bcff5e44871d2bd58a0cd3 329 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 4.9E-131 T 15-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 THII_1238 a85d9b24f3bcff5e44871d2bd58a0cd3 329 PIRSF PIRSF006621 1 326 2.0E-109 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 THII_1238 a85d9b24f3bcff5e44871d2bd58a0cd3 329 Gene3D G3DSA:3.20.20.70 6 249 2.8E-81 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_1238 a85d9b24f3bcff5e44871d2bd58a0cd3 329 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 50.383 T 15-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 THII_1238 a85d9b24f3bcff5e44871d2bd58a0cd3 329 SUPERFAMILY SSF51395 10 317 5.49E-90 T 15-10-2018 THII_1238 a85d9b24f3bcff5e44871d2bd58a0cd3 329 Gene3D G3DSA:1.10.1200.80 251 325 1.9E-13 T 15-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 THII_2760 d0a142fbb2fbc70afcdacf6ba107d890 377 SMART SM01002 148 310 8.6E-74 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain THII_2760 d0a142fbb2fbc70afcdacf6ba107d890 377 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 15-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 THII_2760 d0a142fbb2fbc70afcdacf6ba107d890 377 Gene3D G3DSA:3.40.50.720 139 317 4.5E-139 T 15-10-2018 THII_2760 d0a142fbb2fbc70afcdacf6ba107d890 377 SUPERFAMILY SSF51735 139 316 1.64E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2760 d0a142fbb2fbc70afcdacf6ba107d890 377 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 7 139 1.1E-42 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal THII_2760 d0a142fbb2fbc70afcdacf6ba107d890 377 SMART SM01003 6 139 1.1E-61 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal THII_2760 d0a142fbb2fbc70afcdacf6ba107d890 377 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 365 1.3E-67 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain THII_2760 d0a142fbb2fbc70afcdacf6ba107d890 377 Gene3D G3DSA:3.40.50.720 7 352 4.5E-139 T 15-10-2018 THII_2760 d0a142fbb2fbc70afcdacf6ba107d890 377 SUPERFAMILY SSF52283 5 170 1.53E-46 T 15-10-2018 THII_3157 b1901682f2bd02b1e48a9a45eb30a54b 853 Pfam PF14403 Circularly permuted ATP-grasp type 2 94 466 6.1E-143 T 15-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 THII_3157 b1901682f2bd02b1e48a9a45eb30a54b 853 Gene3D G3DSA:3.40.50.11290 229 327 5.1E-39 T 15-10-2018 THII_3157 b1901682f2bd02b1e48a9a45eb30a54b 853 SUPERFAMILY SSF56059 37 387 3.39E-15 T 15-10-2018 THII_3157 b1901682f2bd02b1e48a9a45eb30a54b 853 Gene3D G3DSA:3.30.1490.270 364 420 1.0E-5 T 15-10-2018 THII_3157 b1901682f2bd02b1e48a9a45eb30a54b 853 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 514 835 6.9E-74 T 15-10-2018 IPR007296 Domain of unknown function DUF403 THII_3397 5135f409e49d4040edd167c0144b429e 438 Gene3D G3DSA:3.40.50.720 5 341 2.7E-165 T 15-10-2018 THII_3397 5135f409e49d4040edd167c0144b429e 438 Gene3D G3DSA:3.30.360.10 137 349 2.7E-165 T 15-10-2018 THII_3397 5135f409e49d4040edd167c0144b429e 438 PIRSF PIRSF000098 2 436 2.2E-162 T 15-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 THII_3397 5135f409e49d4040edd167c0144b429e 438 SUPERFAMILY SSF55347 138 303 1.7E-53 T 15-10-2018 THII_3397 5135f409e49d4040edd167c0144b429e 438 SUPERFAMILY SSF51735 4 141 1.16E-32 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3397 5135f409e49d4040edd167c0144b429e 438 Pfam PF00742 Homoserine dehydrogenase 138 316 7.7E-64 T 15-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 THII_3397 5135f409e49d4040edd167c0144b429e 438 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 130 1.7E-17 T 15-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 THII_3397 5135f409e49d4040edd167c0144b429e 438 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 184 206 - T 15-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 THII_3397 5135f409e49d4040edd167c0144b429e 438 SUPERFAMILY SSF55021 354 424 3.23E-10 T 15-10-2018 THII_3397 5135f409e49d4040edd167c0144b429e 438 Gene3D G3DSA:3.30.70.260 350 424 2.7E-165 T 15-10-2018 THII_3397 5135f409e49d4040edd167c0144b429e 438 Pfam PF01842 ACT domain 355 419 7.8E-9 T 15-10-2018 IPR002912 ACT domain THII_1366 dcd324247b543f141e1466649a49f8bf 381 SUPERFAMILY SSF47384 143 225 2.55E-10 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1366 dcd324247b543f141e1466649a49f8bf 381 Gene3D G3DSA:3.30.565.10 222 377 1.8E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1366 dcd324247b543f141e1466649a49f8bf 381 SUPERFAMILY SSF52172 5 145 5.41E-43 T 15-10-2018 IPR011006 CheY-like superfamily THII_1366 dcd324247b543f141e1466649a49f8bf 381 Gene3D G3DSA:1.10.287.130 167 221 1.8E-47 T 15-10-2018 THII_1366 dcd324247b543f141e1466649a49f8bf 381 Gene3D G3DSA:3.40.50.12740 5 166 4.0E-49 T 15-10-2018 THII_1366 dcd324247b543f141e1466649a49f8bf 381 SUPERFAMILY SSF55874 214 378 3.41E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1366 dcd324247b543f141e1466649a49f8bf 381 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 273 378 3.2E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1366 dcd324247b543f141e1466649a49f8bf 381 SMART SM00448 5 118 2.0E-42 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1366 dcd324247b543f141e1466649a49f8bf 381 SMART SM00388 158 224 0.0092 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1366 dcd324247b543f141e1466649a49f8bf 381 Pfam PF00072 Response regulator receiver domain 7 119 3.2E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1366 dcd324247b543f141e1466649a49f8bf 381 SMART SM00387 268 380 1.6E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1366 dcd324247b543f141e1466649a49f8bf 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 319 2.7E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1366 dcd324247b543f141e1466649a49f8bf 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 377 2.7E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1366 dcd324247b543f141e1466649a49f8bf 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 358 2.7E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0919 a8925461a90b9189cc491c36f53dadd5 360 SMART SM00448 5 118 9.7E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0919 a8925461a90b9189cc491c36f53dadd5 360 SMART SM00387 248 360 9.9E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0919 a8925461a90b9189cc491c36f53dadd5 360 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 201 9.9E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0919 a8925461a90b9189cc491c36f53dadd5 360 SMART SM00388 137 202 7.9E-6 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0919 a8925461a90b9189cc491c36f53dadd5 360 SUPERFAMILY SSF52172 4 136 9.53E-37 T 15-10-2018 IPR011006 CheY-like superfamily THII_0919 a8925461a90b9189cc491c36f53dadd5 360 Gene3D G3DSA:3.30.565.10 200 359 8.1E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0919 a8925461a90b9189cc491c36f53dadd5 360 SUPERFAMILY SSF55874 191 360 3.14E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0919 a8925461a90b9189cc491c36f53dadd5 360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 359 5.8E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0919 a8925461a90b9189cc491c36f53dadd5 360 Gene3D G3DSA:3.40.50.2300 1 140 1.6E-34 T 15-10-2018 THII_0919 a8925461a90b9189cc491c36f53dadd5 360 SUPERFAMILY SSF47384 123 203 1.02E-11 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0919 a8925461a90b9189cc491c36f53dadd5 360 Pfam PF00072 Response regulator receiver domain 7 119 2.3E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0919 a8925461a90b9189cc491c36f53dadd5 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 318 1.1E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0919 a8925461a90b9189cc491c36f53dadd5 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 342 1.1E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0919 a8925461a90b9189cc491c36f53dadd5 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 304 1.1E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0919 a8925461a90b9189cc491c36f53dadd5 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 360 1.1E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0919 a8925461a90b9189cc491c36f53dadd5 360 Gene3D G3DSA:1.10.287.130 143 199 8.1E-41 T 15-10-2018 THII_1139 b56e36d00aa6da0f0e2f52817faaf4e0 475 SUPERFAMILY SSF53335 282 415 2.18E-11 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1139 b56e36d00aa6da0f0e2f52817faaf4e0 475 Pfam PF00535 Glycosyl transferase family 2 11 168 2.1E-14 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_1139 b56e36d00aa6da0f0e2f52817faaf4e0 475 Pfam PF13578 Methyltransferase domain 315 415 1.4E-7 T 15-10-2018 THII_1139 b56e36d00aa6da0f0e2f52817faaf4e0 475 Gene3D G3DSA:3.40.50.150 288 458 3.8E-15 T 15-10-2018 THII_1139 b56e36d00aa6da0f0e2f52817faaf4e0 475 Gene3D G3DSA:3.90.550.10 1 219 8.1E-22 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1139 b56e36d00aa6da0f0e2f52817faaf4e0 475 SUPERFAMILY SSF53448 9 235 4.69E-25 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1404 5f4e13f18a84a3d20d781a0c0570ad7d 158 Gene3D G3DSA:3.30.70.640 1 158 2.7E-69 T 15-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_1404 5f4e13f18a84a3d20d781a0c0570ad7d 158 SUPERFAMILY SSF55040 11 155 4.18E-60 T 15-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_1404 5f4e13f18a84a3d20d781a0c0570ad7d 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 9.0E-62 T 15-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_1404 5f4e13f18a84a3d20d781a0c0570ad7d 158 Pfam PF01967 MoaC family 15 150 2.4E-54 T 15-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_1404 5f4e13f18a84a3d20d781a0c0570ad7d 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.25 T 15-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 789 931 8.7E-46 T 15-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 Gene3D G3DSA:3.40.50.970 165 525 2.2E-147 T 15-10-2018 THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 Pfam PF02779 Transketolase, pyrimidine binding domain 591 785 5.0E-67 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 Gene3D G3DSA:3.40.50.11610 721 928 3.5E-168 T 15-10-2018 THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 9 931 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 Pfam PF00676 Dehydrogenase E1 component 208 514 7.5E-55 T 15-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 PIRSF PIRSF000157 1 933 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 SMART SM00861 591 784 5.2E-60 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 SUPERFAMILY SSF52518 576 790 5.35E-51 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 9 39 1.0E-8 T 15-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 SUPERFAMILY SSF52518 122 515 1.62E-88 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 Gene3D G3DSA:1.10.287.1150 84 164 5.5E-23 T 15-10-2018 THII_3445 2d4e3e1de5967179584cdda6db0a955b 939 Gene3D G3DSA:3.40.50.12470 554 800 3.5E-168 T 15-10-2018 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 40.33 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 PIRSF PIRSF001529 1 423 1.8E-172 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 1.5E-166 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.0E-28 T 15-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 SUPERFAMILY SSF55681 117 417 1.54E-96 T 15-10-2018 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 SUPERFAMILY SSF46589 1 112 8.37E-29 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 3.3E-32 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 3.3E-32 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 3.3E-32 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 3.3E-32 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 3.3E-32 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 Gene3D G3DSA:3.30.930.10 105 423 9.3E-114 T 15-10-2018 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 Gene3D G3DSA:1.10.287.40 1 104 3.3E-20 T 15-10-2018 THII_3437 d3946e3b1aa367be073a15cbecc06262 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 399 1.3E-30 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 PIRSF PIRSF037893 3 843 1.2E-222 T 15-10-2018 IPR017309 Peptidase S8A, subtilisin-related, proteobacteria THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 SUPERFAMILY SSF52743 297 625 1.15E-78 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 103 166 2.3E-6 T 15-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 SUPERFAMILY SSF89260 63 178 1.83E-5 T 15-10-2018 THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 376 386 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 562 572 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 PRINTS PR00723 Subtilisin serine protease family (S8) signature 372 385 1.6E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 PRINTS PR00723 Subtilisin serine protease family (S8) signature 561 577 1.6E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 PRINTS PR00723 Subtilisin serine protease family (S8) signature 316 335 1.6E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 Gene3D G3DSA:2.60.120.380 62 182 6.7E-12 T 15-10-2018 THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 Pfam PF00082 Subtilase family 317 614 9.4E-40 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 THII_2174 80eb708f7ab68c9ee5c8bd7b79262cd5 862 Gene3D G3DSA:3.40.50.200 288 630 3.3E-93 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_0263 13e4f4a26b3b950108c001f8e48ec271 201 Gene3D G3DSA:2.160.20.80 19 123 1.2E-29 T 15-10-2018 THII_0263 13e4f4a26b3b950108c001f8e48ec271 201 Pfam PF00805 Pentapeptide repeats (8 copies) 149 188 1.7E-12 T 15-10-2018 IPR001646 Pentapeptide repeat THII_0263 13e4f4a26b3b950108c001f8e48ec271 201 Pfam PF00805 Pentapeptide repeats (8 copies) 59 94 9.5E-12 T 15-10-2018 IPR001646 Pentapeptide repeat THII_0263 13e4f4a26b3b950108c001f8e48ec271 201 SUPERFAMILY SSF141571 30 198 7.46E-47 T 15-10-2018 THII_0263 13e4f4a26b3b950108c001f8e48ec271 201 Gene3D G3DSA:2.160.20.100 124 199 9.7E-20 T 15-10-2018 THII_3465 658cfd0c9a1b7569e034c5da795cae26 207 Gene3D G3DSA:3.90.870.10 1 204 5.0E-64 T 15-10-2018 THII_3465 658cfd0c9a1b7569e034c5da795cae26 207 SUPERFAMILY SSF55821 1 203 2.9E-62 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THII_3465 658cfd0c9a1b7569e034c5da795cae26 207 Pfam PF01300 Telomere recombination 23 198 3.8E-43 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 THII_3465 658cfd0c9a1b7569e034c5da795cae26 207 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 203 1.1E-64 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 THII_3322 9c749ef5e27534dedca8cef6aca701a3 766 Gene3D G3DSA:1.10.3720.10 562 763 1.7E-20 T 15-10-2018 IPR035906 MetI-like superfamily THII_3322 9c749ef5e27534dedca8cef6aca701a3 766 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 483 760 6.2E-7 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 THII_3322 9c749ef5e27534dedca8cef6aca701a3 766 SUPERFAMILY SSF50978 200 445 3.25E-15 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_3322 9c749ef5e27534dedca8cef6aca701a3 766 SUPERFAMILY SSF161098 462 698 1.09E-16 T 15-10-2018 IPR035906 MetI-like superfamily THII_3322 9c749ef5e27534dedca8cef6aca701a3 766 Gene3D G3DSA:2.130.10.10 191 454 3.9E-12 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 SUPERFAMILY SSF46609 1 83 3.27E-35 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 5.9E-34 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 SUPERFAMILY SSF54719 82 191 1.15E-45 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 Gene3D G3DSA:2.40.500.20 83 192 1.9E-45 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 PIRSF PIRSF000349 1 192 4.3E-88 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 Gene3D G3DSA:1.10.287.990 20 82 1.1E-27 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 9.3E-42 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.1E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 3.1E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.1E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 3.1E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 3.1E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3180 f1b72f44f9144170ab7aca8a74b02166 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_0301 e0b1e39b699aab4330a5af5f50b68266 105 Gene3D G3DSA:2.30.30.30 1 104 3.3E-39 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 THII_0301 e0b1e39b699aab4330a5af5f50b68266 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 103 9.7E-25 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0301 e0b1e39b699aab4330a5af5f50b68266 105 SMART SM00739 3 30 1.0E-5 T 15-10-2018 IPR005824 KOW THII_0301 e0b1e39b699aab4330a5af5f50b68266 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 20.691 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0301 e0b1e39b699aab4330a5af5f50b68266 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 103 1.9E-39 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0301 e0b1e39b699aab4330a5af5f50b68266 105 Pfam PF00467 KOW motif 6 36 1.6E-6 T 15-10-2018 IPR005824 KOW THII_0301 e0b1e39b699aab4330a5af5f50b68266 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 15-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0301 e0b1e39b699aab4330a5af5f50b68266 105 SUPERFAMILY SSF50104 3 102 2.86E-34 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily THII_2398 ed275630a40197636dbf502b7d9a7234 304 SUPERFAMILY SSF50985 38 303 4.1E-36 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_2398 ed275630a40197636dbf502b7d9a7234 304 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 70 97 6.6E-5 T 15-10-2018 THII_2398 ed275630a40197636dbf502b7d9a7234 304 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 148 175 4.7E-9 T 15-10-2018 THII_2398 ed275630a40197636dbf502b7d9a7234 304 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 108 139 3.4E-6 T 15-10-2018 THII_2398 ed275630a40197636dbf502b7d9a7234 304 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 225 253 3.1E-5 T 15-10-2018 THII_2398 ed275630a40197636dbf502b7d9a7234 304 Gene3D G3DSA:2.130.10.30 106 303 1.3E-43 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_3129 fa1c5db8fdfa917edfe12f06bea2e67b 82 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_3129 fa1c5db8fdfa917edfe12f06bea2e67b 82 SUPERFAMILY SSF54862 6 63 3.67E-13 T 15-10-2018 THII_3129 fa1c5db8fdfa917edfe12f06bea2e67b 82 Pfam PF00037 4Fe-4S binding domain 7 24 6.1E-6 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_3129 fa1c5db8fdfa917edfe12f06bea2e67b 82 Gene3D G3DSA:3.30.70.20 2 75 7.2E-21 T 15-10-2018 THII_3376 e6448e0682351941c981088d684fabbc 826 SUPERFAMILY SSF51126 47 365 2.83E-37 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_3376 e6448e0682351941c981088d684fabbc 826 SMART SM00912 33 140 1.7E-12 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_3376 e6448e0682351941c981088d684fabbc 826 Gene3D G3DSA:2.160.20.10 566 726 6.9E-12 T 15-10-2018 IPR012334 Pectin lyase fold THII_3376 e6448e0682351941c981088d684fabbc 826 Gene3D G3DSA:2.160.20.10 39 445 6.5E-51 T 15-10-2018 IPR012334 Pectin lyase fold THII_3376 e6448e0682351941c981088d684fabbc 826 Pfam PF05860 haemagglutination activity domain 45 135 1.8E-21 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_3376 e6448e0682351941c981088d684fabbc 826 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 57 134 1.2E-18 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_3376 e6448e0682351941c981088d684fabbc 826 SUPERFAMILY SSF51126 376 492 1.73E-7 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0269 f5458a7286a82d70207e422490745c62 148 Gene3D G3DSA:1.10.760.10 45 128 2.2E-21 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0269 f5458a7286a82d70207e422490745c62 148 PRINTS PR00606 Class ID cytochrome C signature 59 72 2.3E-8 T 15-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 THII_0269 f5458a7286a82d70207e422490745c62 148 PRINTS PR00606 Class ID cytochrome C signature 44 57 2.3E-8 T 15-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 THII_0269 f5458a7286a82d70207e422490745c62 148 PRINTS PR00606 Class ID cytochrome C signature 117 127 2.3E-8 T 15-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 THII_0269 f5458a7286a82d70207e422490745c62 148 SUPERFAMILY SSF46626 49 126 2.63E-9 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0381 133d522cdb187863f919dd55e6298a63 208 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 60 77 - T 15-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 THII_0381 133d522cdb187863f919dd55e6298a63 208 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 77 5.0E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 THII_0381 133d522cdb187863f919dd55e6298a63 208 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 5.0E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 THII_0381 133d522cdb187863f919dd55e6298a63 208 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 39 54 5.0E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 THII_0381 133d522cdb187863f919dd55e6298a63 208 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 26 184 1.1E-50 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 THII_0381 133d522cdb187863f919dd55e6298a63 208 SUPERFAMILY SSF50891 23 188 1.18E-57 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily THII_0381 133d522cdb187863f919dd55e6298a63 208 Gene3D G3DSA:2.40.100.10 22 188 7.1E-68 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 9 224 9.3E-60 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 PRINTS PR00783 Major intrinsic protein family signature 82 101 8.2E-55 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 PRINTS PR00783 Major intrinsic protein family signature 45 69 8.2E-55 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 PRINTS PR00783 Major intrinsic protein family signature 207 227 8.2E-55 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 PRINTS PR00783 Major intrinsic protein family signature 138 156 8.2E-55 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 PRINTS PR00783 Major intrinsic protein family signature 168 190 8.2E-55 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 PRINTS PR00783 Major intrinsic protein family signature 5 24 8.2E-55 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 SUPERFAMILY SSF81338 6 228 4.58E-69 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 ProSitePatterns PS00221 MIP family signature. 63 71 - T 15-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 Gene3D G3DSA:1.20.1080.10 2 230 3.1E-84 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 4 231 35.35 T 15-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 THII_0835 d64377422a3fd4c0e2c09973c99bbd2f 231 Pfam PF00230 Major intrinsic protein 5 224 3.0E-51 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1480 1726 1.6E-83 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2773 3007 2.6E-75 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 390 638 2.5E-86 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5117 5359 5.2E-75 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF53901 5116 5482 7.33E-84 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF51735 4869 5049 5.05E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.40.50.150 4258 4539 3.4E-49 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF13602 Zinc-binding dehydrogenase 180 320 3.5E-21 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 5272 5288 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF53901 2770 3123 2.03E-85 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.30.70.3050 1975 2076 2.8E-225 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4653 4668 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:1.10.1200.10 5725 5809 4.4E-13 T 15-10-2018 IPR036736 ACP-like superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:1.10.1200.10 2633 2728 1.9E-17 T 15-10-2018 IPR036736 ACP-like superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00826 3379 3567 8.8E-6 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00826 1015 1187 2.6E-15 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.30.70.3050 3250 3346 1.6E-222 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.30.70.3050 877 975 7.3E-237 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.30.70.3050 5590 5692 1.0E-219 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1639 1655 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00829 4765 5078 1.0E-82 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00829 10 320 6.8E-99 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.10.129.110 3385 3701 6.6E-76 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.10.129.110 1021 1322 2.6E-78 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF50129 5 142 2.04E-30 T 15-10-2018 IPR011032 GroES-like superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF47336 2651 2723 9.95E-12 T 15-10-2018 IPR036736 ACP-like superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.40.47.10 2773 3357 1.6E-222 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF53335 4344 4532 8.77E-26 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF47336 4625 4701 5.5E-15 T 15-10-2018 IPR036736 ACP-like superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.40.47.10 391 986 7.3E-237 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF47336 5736 5810 6.81E-11 T 15-10-2018 IPR036736 ACP-like superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00823 Phosphopantetheine attachment site 1360 1431 6.2E-7 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00823 Phosphopantetheine attachment site 5738 5809 0.009 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00823 Phosphopantetheine attachment site 2652 2723 1.2E-9 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00823 Phosphopantetheine attachment site 4627 4698 1.6E-13 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.40.50.720 3765 4154 2.7E-65 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM01294 4628 4694 3.4E-14 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM01294 2653 2719 1.5E-8 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 82 2.8E-8 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 4783 4844 6.6E-6 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF08659 KR domain 2355 2537 1.8E-24 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF08659 KR domain 3921 4100 1.6E-38 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.40.47.10 5119 5703 1.0E-219 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:1.10.1200.10 1351 1435 2.3E-16 T 15-10-2018 IPR036736 ACP-like superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF00975 Thioesterase domain 5854 6128 2.8E-33 T 15-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF51735 2352 2539 4.84E-19 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2920 2936 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF00550 Phosphopantetheine attachment site 5741 5805 9.2E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF00550 Phosphopantetheine attachment site 2655 2719 2.3E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF00550 Phosphopantetheine attachment site 4629 4694 3.8E-14 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF00550 Phosphopantetheine attachment site 1362 1427 5.4E-12 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF51735 109 283 1.11E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF53901 1476 1912 2.03E-90 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1734 1858 2.6E-37 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3015 3132 2.2E-39 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 5367 5484 1.8E-39 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 646 763 3.7E-37 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1386 1401 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 767 871 6.0E-13 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1862 1956 1.0E-9 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3136 3258 4.7E-11 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 5488 5592 1.2E-10 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.40.47.10 1482 2095 2.8E-225 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF51735 3920 4138 6.58E-25 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF00107 Zinc-binding dehydrogenase 4907 5019 2.6E-22 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF53474 5836 6136 1.35E-36 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF14765 Polyketide synthase dehydratase 3379 3683 1.7E-54 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF14765 Polyketide synthase dehydratase 1015 1313 9.1E-54 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF51735 3742 3903 5.51E-8 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00825 Beta-ketoacyl synthase 2774 3186 4.0E-170 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00825 Beta-ketoacyl synthase 1482 1917 3.2E-194 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00825 Beta-ketoacyl synthase 392 817 1.9E-199 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00825 Beta-ketoacyl synthase 5120 5538 7.7E-183 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF50129 4757 4905 2.04E-25 T 15-10-2018 IPR011032 GroES-like superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF47336 1358 1493 1.83E-14 T 15-10-2018 IPR036736 ACP-like superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 551 567 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:1.10.1200.10 4621 4701 2.5E-21 T 15-10-2018 IPR036736 ACP-like superfamily THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Pfam PF08242 Methyltransferase domain 4371 4475 1.8E-12 T 15-10-2018 IPR013217 Methyltransferase type 12 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.90.180.10 4771 5078 3.4E-84 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.40.50.720 125 268 3.9E-92 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.40.50.720 4885 5026 3.4E-84 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 Gene3D G3DSA:3.90.180.10 12 320 3.9E-92 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3921 4102 2.4E-28 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2355 2539 1.8E-8 T 15-10-2018 THII_2209 bd1af88ac532dd54e0ee092889fac682 6150 SUPERFAMILY SSF53901 389 762 3.9E-88 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 Gene3D G3DSA:1.10.580.10 59 412 4.3E-143 T 15-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 15-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 PRINTS PR00143 Citrate synthase signature 380 394 9.6E-54 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 PRINTS PR00143 Citrate synthase signature 221 236 9.6E-54 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 PRINTS PR00143 Citrate synthase signature 296 316 9.6E-54 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 PRINTS PR00143 Citrate synthase signature 243 271 9.6E-54 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 PRINTS PR00143 Citrate synthase signature 360 376 9.6E-54 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 PRINTS PR00143 Citrate synthase signature 167 180 9.6E-54 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 PIRSF PIRSF001369 39 430 4.0E-161 T 15-10-2018 IPR024176 Citrate synthase, bacterial-type THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 423 6.5E-210 T 15-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 Gene3D G3DSA:2.20.28.60 2 52 6.0E-15 T 15-10-2018 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 SUPERFAMILY SSF48256 8 429 1.07E-159 T 15-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 Pfam PF00285 Citrate synthase, C-terminal domain 50 412 3.9E-133 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 THII_3783 03530e4dd9d5bd6d4aaeb9a6fa248a63 431 Gene3D G3DSA:1.10.230.10 270 377 4.3E-143 T 15-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain THII_3290 eed7e5786982ad9d791f7ec2a839bea1 357 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 21 311 2.2E-89 T 15-10-2018 IPR018683 Domain of unknown function DUF2169 THII_1523 4164db048485d155772f4ae7f7e022ed 247 SMART SM00929 85 125 1.2E-11 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1523 4164db048485d155772f4ae7f7e022ed 247 PIRSF PIRSF000309 4 236 1.5E-74 T 15-10-2018 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit MetaCyc: PWY-5382|MetaCyc: PWY-6758 THII_1523 4164db048485d155772f4ae7f7e022ed 247 Gene3D G3DSA:3.10.20.740 5 124 4.4E-31 T 15-10-2018 THII_1523 4164db048485d155772f4ae7f7e022ed 247 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 7 76 2.8E-15 T 15-10-2018 THII_1523 4164db048485d155772f4ae7f7e022ed 247 Pfam PF13459 4Fe-4S single cluster domain 142 207 8.9E-9 T 15-10-2018 THII_1523 4164db048485d155772f4ae7f7e022ed 247 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 35 52 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1523 4164db048485d155772f4ae7f7e022ed 247 Gene3D G3DSA:3.30.70.20 130 210 1.6E-7 T 15-10-2018 THII_1523 4164db048485d155772f4ae7f7e022ed 247 SUPERFAMILY SSF54292 7 125 1.06E-25 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 THII_1523 4164db048485d155772f4ae7f7e022ed 247 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 122 6.1E-11 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0471 0a7cfdeb41455d58e780ad4fac182a57 328 Pfam PF02625 XdhC and CoxI family 15 69 6.9E-19 T 15-10-2018 IPR003777 XdhC- CoxI THII_0471 0a7cfdeb41455d58e780ad4fac182a57 328 Pfam PF13478 XdhC Rossmann domain 164 305 5.7E-37 T 15-10-2018 IPR027051 XdhC Rossmann domain THII_0471 0a7cfdeb41455d58e780ad4fac182a57 328 SUPERFAMILY SSF52440 161 230 8.34E-8 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily THII_0471 0a7cfdeb41455d58e780ad4fac182a57 328 Gene3D G3DSA:3.40.50.720 163 311 1.3E-42 T 15-10-2018 THII_1360 a1572b8a5e2f17ba6c12b30de9f28e60 88 Pfam PF01710 Transposase 1 84 1.3E-7 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 Pfam PF14698 Argininosuccinate lyase C-terminal 367 435 2.7E-25 T 15-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 Gene3D G3DSA:1.20.200.10 123 452 2.3E-196 T 15-10-2018 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 Pfam PF00206 Lyase 10 304 5.8E-81 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 Gene3D G3DSA:1.10.275.10 29 233 2.3E-196 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 TIGRFAM TIGR00838 argH: argininosuccinate lyase 8 459 9.1E-198 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 PRINTS PR00149 Fumarate lyase superfamily signature 106 124 3.8E-31 T 15-10-2018 IPR000362 Fumarate lyase family THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 PRINTS PR00149 Fumarate lyase superfamily signature 151 169 3.8E-31 T 15-10-2018 IPR000362 Fumarate lyase family THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 PRINTS PR00149 Fumarate lyase superfamily signature 235 262 3.8E-31 T 15-10-2018 IPR000362 Fumarate lyase family THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 3.8E-31 T 15-10-2018 IPR000362 Fumarate lyase family THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 PRINTS PR00145 Argininosuccinate lyase family signature 197 213 7.6E-69 T 15-10-2018 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 7.6E-69 T 15-10-2018 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 PRINTS PR00145 Argininosuccinate lyase family signature 235 259 7.6E-69 T 15-10-2018 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 PRINTS PR00145 Argininosuccinate lyase family signature 105 127 7.6E-69 T 15-10-2018 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 PRINTS PR00145 Argininosuccinate lyase family signature 146 166 7.6E-69 T 15-10-2018 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 PRINTS PR00145 Argininosuccinate lyase family signature 314 333 7.6E-69 T 15-10-2018 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 Gene3D G3DSA:1.10.40.30 364 436 2.3E-196 T 15-10-2018 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 SUPERFAMILY SSF48557 8 458 2.83E-153 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 THII_0752 c8aebff9e678efcaf608d5b7b9c065e7 459 Hamap MF_00006 Argininosuccinate lyase [argH]. 6 457 43.554 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 8.7E-27 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 8.7E-27 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 8.7E-27 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 8.7E-27 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 Gene3D G3DSA:3.40.50.1370 4 133 2.6E-117 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 143 4.7E-50 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 299 6.9E-120 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 297 1.4E-52 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 Gene3D G3DSA:3.40.50.1370 134 295 2.6E-117 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 1.8E-30 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 1.8E-30 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 1.8E-30 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 1.8E-30 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 1.8E-30 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 SUPERFAMILY SSF53671 2 299 5.76E-107 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 THII_0713 45a20ea825b2da963635fa29a53de5ca 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 78.07 T 15-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 THII_0837 83c749b9c9679e6b28acfba6a2321854 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 1.7E-5 T 15-10-2018 THII_0837 83c749b9c9679e6b28acfba6a2321854 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 THII_0837 83c749b9c9679e6b28acfba6a2321854 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 2.6E-112 T 15-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 THII_0837 83c749b9c9679e6b28acfba6a2321854 246 Gene3D G3DSA:3.40.50.720 1 246 8.1E-77 T 15-10-2018 THII_0837 83c749b9c9679e6b28acfba6a2321854 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 9.2E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0837 83c749b9c9679e6b28acfba6a2321854 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 9.2E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0837 83c749b9c9679e6b28acfba6a2321854 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 9.2E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0837 83c749b9c9679e6b28acfba6a2321854 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.3E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0837 83c749b9c9679e6b28acfba6a2321854 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.3E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0837 83c749b9c9679e6b28acfba6a2321854 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.3E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0837 83c749b9c9679e6b28acfba6a2321854 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0837 83c749b9c9679e6b28acfba6a2321854 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.3E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0837 83c749b9c9679e6b28acfba6a2321854 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.3E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0837 83c749b9c9679e6b28acfba6a2321854 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 1.3E-58 T 15-10-2018 THII_0837 83c749b9c9679e6b28acfba6a2321854 246 SUPERFAMILY SSF51735 3 245 2.55E-79 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 SMART SM00490 244 325 2.1E-23 T 15-10-2018 IPR001650 Helicase, C-terminal THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 SMART SM00341 527 606 4.1E-16 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 Pfam PF09382 RQC domain 401 509 6.9E-40 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 Gene3D G3DSA:3.40.50.300 2 201 3.9E-78 T 15-10-2018 THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 Gene3D G3DSA:3.40.50.300 202 334 2.5E-36 T 15-10-2018 THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 SMART SM00487 15 211 6.4E-31 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 Pfam PF00270 DEAD/DEAH box helicase 23 178 1.6E-18 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 Gene3D G3DSA:1.10.10.10 337 514 1.9E-50 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 8 600 6.1E-234 T 15-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 SUPERFAMILY SSF47819 529 603 2.83E-22 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 Gene3D G3DSA:1.10.150.80 525 605 2.1E-22 T 15-10-2018 THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 457 1.1E-157 T 15-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 Pfam PF00570 HRDC domain 531 597 2.8E-20 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 SUPERFAMILY SSF52540 201 452 1.26E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 Pfam PF00271 Helicase conserved C-terminal domain 219 324 1.4E-17 T 15-10-2018 IPR001650 Helicase, C-terminal THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 SMART SM00956 405 508 2.7E-53 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 Pfam PF16124 RecQ zinc-binding 345 398 1.9E-17 T 15-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain THII_1217 cff57f2e91a89097983b7b5bd25e4bae 606 SUPERFAMILY SSF52540 7 190 1.17E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1796 0d8e983e801533d335ad1157c354aeed 289 Gene3D G3DSA:3.10.580.10 49 195 4.0E-51 T 15-10-2018 THII_1796 0d8e983e801533d335ad1157c354aeed 289 SMART SM00116 75 124 1.3 T 15-10-2018 IPR000644 CBS domain THII_1796 0d8e983e801533d335ad1157c354aeed 289 SMART SM00116 139 187 1.2 T 15-10-2018 IPR000644 CBS domain THII_1796 0d8e983e801533d335ad1157c354aeed 289 SMART SM01091 203 281 7.9E-29 T 15-10-2018 IPR005170 Transporter-associated domain THII_1796 0d8e983e801533d335ad1157c354aeed 289 SUPERFAMILY SSF54631 62 201 7.58E-33 T 15-10-2018 THII_1796 0d8e983e801533d335ad1157c354aeed 289 Gene3D G3DSA:3.30.465.10 200 281 6.6E-29 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_1796 0d8e983e801533d335ad1157c354aeed 289 Pfam PF00571 CBS domain 66 124 5.5E-4 T 15-10-2018 IPR000644 CBS domain THII_1796 0d8e983e801533d335ad1157c354aeed 289 Pfam PF00571 CBS domain 134 187 1.6E-5 T 15-10-2018 IPR000644 CBS domain THII_1796 0d8e983e801533d335ad1157c354aeed 289 SUPERFAMILY SSF56176 202 280 3.0E-23 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 THII_1796 0d8e983e801533d335ad1157c354aeed 289 Pfam PF03471 Transporter associated domain 206 279 7.0E-22 T 15-10-2018 IPR005170 Transporter-associated domain THII_0751 4add523b722458dd660149520e02dac8 809 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 538 1.8E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0751 4add523b722458dd660149520e02dac8 809 Gene3D G3DSA:3.40.50.12740 564 685 3.8E-34 T 15-10-2018 THII_0751 4add523b722458dd660149520e02dac8 809 Gene3D G3DSA:3.40.50.12740 686 807 3.4E-31 T 15-10-2018 THII_0751 4add523b722458dd660149520e02dac8 809 Pfam PF00512 His Kinase A (phospho-acceptor) domain 303 379 3.9E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0751 4add523b722458dd660149520e02dac8 809 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 168 290 1.6E-14 T 15-10-2018 IPR000014 PAS domain THII_0751 4add523b722458dd660149520e02dac8 809 SUPERFAMILY SSF52172 565 678 4.55E-32 T 15-10-2018 IPR011006 CheY-like superfamily THII_0751 4add523b722458dd660149520e02dac8 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 493 3.5E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0751 4add523b722458dd660149520e02dac8 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 537 3.5E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0751 4add523b722458dd660149520e02dac8 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 479 3.5E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0751 4add523b722458dd660149520e02dac8 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 518 3.5E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0751 4add523b722458dd660149520e02dac8 809 Gene3D G3DSA:3.40.50.2300 1 141 2.1E-36 T 15-10-2018 THII_0751 4add523b722458dd660149520e02dac8 809 SUPERFAMILY SSF55874 368 538 2.88E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0751 4add523b722458dd660149520e02dac8 809 SUPERFAMILY SSF52172 4 180 1.57E-36 T 15-10-2018 IPR011006 CheY-like superfamily THII_0751 4add523b722458dd660149520e02dac8 809 SMART SM00091 164 230 3.8E-10 T 15-10-2018 IPR000014 PAS domain THII_0751 4add523b722458dd660149520e02dac8 809 SUPERFAMILY SSF47384 289 381 4.51E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0751 4add523b722458dd660149520e02dac8 809 Gene3D G3DSA:1.10.287.130 281 377 1.9E-27 T 15-10-2018 THII_0751 4add523b722458dd660149520e02dac8 809 SMART SM00388 303 379 3.3E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0751 4add523b722458dd660149520e02dac8 809 Gene3D G3DSA:3.30.565.10 378 544 1.3E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0751 4add523b722458dd660149520e02dac8 809 SUPERFAMILY SSF55785 149 281 2.79E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_0751 4add523b722458dd660149520e02dac8 809 SUPERFAMILY SSF52172 686 804 9.82E-29 T 15-10-2018 IPR011006 CheY-like superfamily THII_0751 4add523b722458dd660149520e02dac8 809 SMART SM00448 565 675 6.9E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0751 4add523b722458dd660149520e02dac8 809 SMART SM00448 686 800 1.3E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0751 4add523b722458dd660149520e02dac8 809 SMART SM00448 6 121 2.0E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0751 4add523b722458dd660149520e02dac8 809 Pfam PF00072 Response regulator receiver domain 567 675 2.1E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0751 4add523b722458dd660149520e02dac8 809 Pfam PF00072 Response regulator receiver domain 8 121 1.3E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0751 4add523b722458dd660149520e02dac8 809 Pfam PF00072 Response regulator receiver domain 688 800 1.0E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0751 4add523b722458dd660149520e02dac8 809 Gene3D G3DSA:3.30.450.20 150 280 2.8E-25 T 15-10-2018 THII_0751 4add523b722458dd660149520e02dac8 809 SMART SM00387 425 540 9.8E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0751 4add523b722458dd660149520e02dac8 809 Pfam PF00989 PAS fold 166 280 9.8E-17 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_1829 9361df23c42a75938e3952822369cb46 353 SUPERFAMILY SSF52540 3 336 1.21E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1829 9361df23c42a75938e3952822369cb46 353 Gene3D G3DSA:3.30.450.90 1 101 6.0E-27 T 15-10-2018 THII_1829 9361df23c42a75938e3952822369cb46 353 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 194 208 - T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_1829 9361df23c42a75938e3952822369cb46 353 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 2.8E-126 T 15-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 THII_1829 9361df23c42a75938e3952822369cb46 353 Pfam PF00437 Type II/IV secretion system protein 9 269 1.6E-41 T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_1829 9361df23c42a75938e3952822369cb46 353 Gene3D G3DSA:3.40.50.300 102 351 3.6E-88 T 15-10-2018 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 SUPERFAMILY SSF47090 162 232 1.57E-14 T 15-10-2018 IPR036365 PGBD-like superfamily THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 Gene3D G3DSA:3.30.565.10 526 689 1.3E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 SMART SM00304 382 434 2.6E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 SMART SM00387 570 686 1.9E-38 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 SMART SM00388 456 524 1.3E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 Pfam PF00512 His Kinase A (phospho-acceptor) domain 457 524 2.7E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 571 685 1.1E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 Gene3D G3DSA:1.20.1480.50 347 438 1.1E-14 T 15-10-2018 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 683 1.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 625 1.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 664 1.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 639 1.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 Pfam PF01471 Putative peptidoglycan binding domain 178 228 2.2E-11 T 15-10-2018 IPR002477 Peptidoglycan binding-like THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 Pfam PF00672 HAMP domain 383 430 6.2E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 Gene3D G3DSA:1.10.287.130 439 525 6.5E-25 T 15-10-2018 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 Pfam PF02743 Cache domain 241 330 4.9E-12 T 15-10-2018 IPR033479 Double Cache domain 1 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 Gene3D G3DSA:3.30.450.20 37 164 7.6E-14 T 15-10-2018 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 SUPERFAMILY SSF158472 383 430 3.66E-9 T 15-10-2018 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 Gene3D G3DSA:3.30.450.20 238 346 2.0E-13 T 15-10-2018 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 SUPERFAMILY SSF47384 443 525 1.1E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 SUPERFAMILY SSF55874 513 687 5.37E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0189 b9dbd2a3b571477c3b181c3059da84f4 693 Gene3D G3DSA:1.10.101.10 165 237 7.5E-15 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 THII_2825 e91e26057c43fc6a298f7a3d7584b545 152 Pfam PF00075 RNase H 7 142 4.2E-48 T 15-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 THII_2825 e91e26057c43fc6a298f7a3d7584b545 152 Hamap MF_00042 Ribonuclease H [rnhA]. 3 151 33.5 T 15-10-2018 IPR022892 Ribonuclease HI GO:0004523 THII_2825 e91e26057c43fc6a298f7a3d7584b545 152 Gene3D G3DSA:3.30.420.10 4 149 8.7E-57 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 THII_2825 e91e26057c43fc6a298f7a3d7584b545 152 SUPERFAMILY SSF53098 5 144 5.31E-57 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_1529 632555f4be891e574cadfc853adcb785 230 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 4 224 42.482 T 15-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 THII_1529 632555f4be891e574cadfc853adcb785 230 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 1.4E-87 T 15-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 THII_1529 632555f4be891e574cadfc853adcb785 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 97 207 1.0E-38 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel THII_0430 285f97c1ec8e8153ebb3adb9adc8eae2 259 Pfam PF13534 4Fe-4S dicluster domain 170 243 2.9E-9 T 15-10-2018 THII_0430 285f97c1ec8e8153ebb3adb9adc8eae2 259 Gene3D G3DSA:3.10.20.30 19 128 2.9E-45 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_0430 285f97c1ec8e8153ebb3adb9adc8eae2 259 SUPERFAMILY SSF54292 27 128 8.52E-31 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 THII_0430 285f97c1ec8e8153ebb3adb9adc8eae2 259 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 30 133 3.7E-32 T 15-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0430 285f97c1ec8e8153ebb3adb9adc8eae2 259 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 252 1.6E-81 T 15-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0430 285f97c1ec8e8153ebb3adb9adc8eae2 259 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 THII_0430 285f97c1ec8e8153ebb3adb9adc8eae2 259 Gene3D G3DSA:1.10.1060.10 129 259 3.1E-57 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_0430 285f97c1ec8e8153ebb3adb9adc8eae2 259 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0430 285f97c1ec8e8153ebb3adb9adc8eae2 259 SUPERFAMILY SSF46548 130 257 2.96E-38 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_3457 8cedc6cac0fe71164fcd332cdf41c6c9 149 SUPERFAMILY SSF55658 1 56 1.92E-17 T 15-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal THII_3457 8cedc6cac0fe71164fcd332cdf41c6c9 149 SUPERFAMILY SSF55653 62 148 7.32E-25 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily THII_3457 8cedc6cac0fe71164fcd332cdf41c6c9 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 65 147 1.3E-25 T 15-10-2018 IPR020069 Ribosomal protein L9, C-terminal THII_3457 8cedc6cac0fe71164fcd332cdf41c6c9 149 Gene3D G3DSA:3.40.5.10 1 50 1.3E-21 T 15-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3457 8cedc6cac0fe71164fcd332cdf41c6c9 149 Gene3D G3DSA:3.10.430.100 61 148 1.7E-28 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily THII_3457 8cedc6cac0fe71164fcd332cdf41c6c9 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.1E-21 T 15-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3457 8cedc6cac0fe71164fcd332cdf41c6c9 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.804 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_3457 8cedc6cac0fe71164fcd332cdf41c6c9 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 4.3E-45 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 902 284.808 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 SUPERFAMILY SSF55021 815 891 1.55E-11 T 15-10-2018 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 Gene3D G3DSA:1.20.120.330 189 333 2.8E-6 T 15-10-2018 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 Pfam PF01966 HD domain 470 598 4.0E-12 T 15-10-2018 IPR006674 HD domain THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 Gene3D G3DSA:1.10.3210.10 457 585 4.3E-8 T 15-10-2018 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 SUPERFAMILY SSF81593 211 327 7.45E-14 T 15-10-2018 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 SUPERFAMILY SSF81301 43 184 1.31E-23 T 15-10-2018 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 Pfam PF01909 Nucleotidyltransferase domain 86 122 1.3E-6 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 Pfam PF08335 GlnD PII-uridylyltransferase 193 332 6.5E-44 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 SMART SM00471 465 612 1.2E-10 T 15-10-2018 IPR003607 HD/PDEase domain THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 44 885 6.0E-274 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 Gene3D G3DSA:3.30.70.260 814 896 2.8E-7 T 15-10-2018 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 SUPERFAMILY SSF109604 436 598 1.82E-15 T 15-10-2018 THII_3615 174bf96fe82cd066527d8d0881e4e0e9 902 PIRSF PIRSF006288 18 896 2.2E-303 T 15-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 Gene3D G3DSA:3.30.1360.10 18 227 9.6E-82 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 Gene3D G3DSA:2.170.120.12 53 176 9.6E-82 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 SMART SM00662 23 233 1.9E-91 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 Gene3D G3DSA:1.10.150.20 243 328 5.5E-37 T 15-10-2018 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 SUPERFAMILY SSF56553 53 177 5.23E-40 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 154 1.9E-22 T 15-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 3.5E-108 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 327 4.0E-31 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 SUPERFAMILY SSF55257 6 230 1.37E-29 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 34.987 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 244 307 1.7E-24 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 SUPERFAMILY SSF47789 250 323 2.88E-26 T 15-10-2018 THII_0288 f5239e0c4c371b3e8f4faa72e6d529a9 334 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 9.9E-22 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_3719 bb8b176828373c692ffc94145e03ff98 612 Pfam PF02543 Carbamoyltransferase N-terminus 3 347 2.9E-108 T 15-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 THII_3719 bb8b176828373c692ffc94145e03ff98 612 Gene3D G3DSA:3.30.420.350 131 340 2.4E-105 T 15-10-2018 THII_3719 bb8b176828373c692ffc94145e03ff98 612 SUPERFAMILY SSF53067 1 352 6.29E-23 T 15-10-2018 THII_3719 bb8b176828373c692ffc94145e03ff98 612 Gene3D G3DSA:3.30.420.40 10 347 2.4E-105 T 15-10-2018 THII_3719 bb8b176828373c692ffc94145e03ff98 612 Pfam PF16861 Carbamoyltransferase C-terminus 404 593 1.2E-74 T 15-10-2018 IPR031730 Carbamoyltransferase, C-terminal THII_3719 bb8b176828373c692ffc94145e03ff98 612 Gene3D G3DSA:3.90.870.20 367 592 5.1E-83 T 15-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Gene3D G3DSA:1.25.40.10 3 108 7.4E-22 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Gene3D G3DSA:3.40.50.2000 523 705 4.1E-132 T 15-10-2018 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Pfam PF13414 TPR repeat 91 121 2.2E-9 T 15-10-2018 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Pfam PF13414 TPR repeat 221 262 3.2E-12 T 15-10-2018 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Pfam PF13414 TPR repeat 153 194 3.2E-11 T 15-10-2018 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SUPERFAMILY SSF48452 210 347 1.76E-28 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Pfam PF13432 Tetratricopeptide repeat 22 73 3.2E-4 T 15-10-2018 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SUPERFAMILY SSF53756 425 645 1.07E-6 T 15-10-2018 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Pfam PF13844 Glycosyl transferase family 41 368 516 1.3E-29 T 15-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Pfam PF13844 Glycosyl transferase family 41 532 723 2.6E-32 T 15-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SUPERFAMILY SSF48452 14 246 3.79E-48 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Gene3D G3DSA:1.25.40.10 109 175 1.5E-19 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Gene3D G3DSA:1.25.40.10 244 329 2.2E-18 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Gene3D G3DSA:1.25.40.10 176 243 2.0E-22 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SMART SM00028 282 315 2.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SMART SM00028 146 179 1.5E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SMART SM00028 78 111 7.7E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SMART SM00028 112 145 4.3E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SMART SM00028 248 281 2.7E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SMART SM00028 180 213 7.7E-7 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SMART SM00028 214 247 1.8E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SMART SM00028 44 77 0.013 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 SMART SM00028 10 43 6.1 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3940 7fb13f942a4ef9b7dfaa8bca73049859 733 Gene3D G3DSA:3.40.50.11380 353 712 4.1E-132 T 15-10-2018 THII_3411 9dbda8ddaefee046ef1c2be59cd9248f 204 Pfam PF00625 Guanylate kinase 7 183 1.5E-51 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit THII_3411 9dbda8ddaefee046ef1c2be59cd9248f 204 Gene3D G3DSA:3.40.50.300 9 181 2.8E-66 T 15-10-2018 THII_3411 9dbda8ddaefee046ef1c2be59cd9248f 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 182 8.0E-71 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 THII_3411 9dbda8ddaefee046ef1c2be59cd9248f 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 15-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 THII_3411 9dbda8ddaefee046ef1c2be59cd9248f 204 Hamap MF_00328 Guanylate kinase [gmk]. 2 185 34.959 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 THII_3411 9dbda8ddaefee046ef1c2be59cd9248f 204 SUPERFAMILY SSF52540 3 187 3.07E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3411 9dbda8ddaefee046ef1c2be59cd9248f 204 Gene3D G3DSA:3.30.63.10 35 94 2.8E-66 T 15-10-2018 THII_3411 9dbda8ddaefee046ef1c2be59cd9248f 204 SMART SM00072 3 185 3.6E-56 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 SMART SM00271 4 61 5.6E-26 T 15-10-2018 IPR001623 DnaJ domain THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 Pfam PF00226 DnaJ domain 5 66 1.4E-25 T 15-10-2018 IPR001623 DnaJ domain THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 Gene3D G3DSA:2.60.260.20 211 288 1.8E-27 T 15-10-2018 THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 Gene3D G3DSA:2.60.260.20 130 210 3.2E-18 T 15-10-2018 THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 SUPERFAMILY SSF49493 127 225 9.42E-18 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 Pfam PF01556 DnaJ C terminal domain 136 288 3.2E-34 T 15-10-2018 IPR002939 Chaperone DnaJ, C-terminal THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 Gene3D G3DSA:1.10.287.110 2 123 6.8E-35 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 15-10-2018 IPR018253 DnaJ domain, conserved site THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 SUPERFAMILY SSF46565 1 89 5.63E-31 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 SUPERFAMILY SSF49493 217 299 1.96E-19 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 PRINTS PR00625 DnaJ domain signature 61 80 1.9E-24 T 15-10-2018 IPR001623 DnaJ domain THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 PRINTS PR00625 DnaJ domain signature 41 61 1.9E-24 T 15-10-2018 IPR001623 DnaJ domain THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 PRINTS PR00625 DnaJ domain signature 25 40 1.9E-24 T 15-10-2018 IPR001623 DnaJ domain THII_2286 f3b000a1ee68ae90c394d28ce3f5de2b 317 PRINTS PR00625 DnaJ domain signature 7 25 1.9E-24 T 15-10-2018 IPR001623 DnaJ domain THII_3070 50a9e0bb19df80a1be1f44b0bfa4a7da 711 Gene3D G3DSA:3.40.50.410 525 697 7.8E-14 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_3070 50a9e0bb19df80a1be1f44b0bfa4a7da 711 SUPERFAMILY SSF53300 526 709 3.03E-20 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_3070 50a9e0bb19df80a1be1f44b0bfa4a7da 711 SMART SM00327 525 706 1.5E-11 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_3446 a62ebfea6537526c47a630614fc14722 324 PIRSF PIRSF000102 1 323 1.2E-63 T 15-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 THII_3446 a62ebfea6537526c47a630614fc14722 324 Gene3D G3DSA:3.40.50.720 2 154 3.6E-56 T 15-10-2018 THII_3446 a62ebfea6537526c47a630614fc14722 324 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 156 317 5.7E-36 T 15-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 THII_3446 a62ebfea6537526c47a630614fc14722 324 SUPERFAMILY SSF51735 3 155 2.39E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3446 a62ebfea6537526c47a630614fc14722 324 SUPERFAMILY SSF56327 156 323 7.57E-56 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 THII_3446 a62ebfea6537526c47a630614fc14722 324 Gene3D G3DSA:3.90.110.10 155 323 1.6E-59 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 THII_3446 a62ebfea6537526c47a630614fc14722 324 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 147 4.7E-33 T 15-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 THII_3446 a62ebfea6537526c47a630614fc14722 324 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 155 167 - T 15-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 THII_3446 a62ebfea6537526c47a630614fc14722 324 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 323 52.028 T 15-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 THII_3446 a62ebfea6537526c47a630614fc14722 324 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 2 317 4.1E-143 T 15-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 THII_3933 e36e11a3c5fc6093275b22019035c36a 719 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 292 716 5.7E-144 T 15-10-2018 IPR013355 Type IV pilus secretin PilQ THII_3933 e36e11a3c5fc6093275b22019035c36a 719 Pfam PF11741 AMIN domain 47 129 4.1E-9 T 15-10-2018 IPR021731 AMIN domain THII_3933 e36e11a3c5fc6093275b22019035c36a 719 Gene3D G3DSA:2.60.40.3470 154 275 4.1E-31 T 15-10-2018 THII_3933 e36e11a3c5fc6093275b22019035c36a 719 Pfam PF00263 Bacterial type II and III secretion system protein 559 716 1.8E-44 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 THII_3933 e36e11a3c5fc6093275b22019035c36a 719 Gene3D G3DSA:2.60.40.3500 23 131 8.7E-8 T 15-10-2018 THII_3933 e36e11a3c5fc6093275b22019035c36a 719 PRINTS PR00811 Bacterial general secretion pathway protein D signature 680 698 8.7E-18 T 15-10-2018 IPR001775 GspD/PilQ family THII_3933 e36e11a3c5fc6093275b22019035c36a 719 PRINTS PR00811 Bacterial general secretion pathway protein D signature 458 468 8.7E-18 T 15-10-2018 IPR001775 GspD/PilQ family THII_3933 e36e11a3c5fc6093275b22019035c36a 719 PRINTS PR00811 Bacterial general secretion pathway protein D signature 555 579 8.7E-18 T 15-10-2018 IPR001775 GspD/PilQ family THII_3933 e36e11a3c5fc6093275b22019035c36a 719 PRINTS PR00811 Bacterial general secretion pathway protein D signature 703 717 8.7E-18 T 15-10-2018 IPR001775 GspD/PilQ family THII_3933 e36e11a3c5fc6093275b22019035c36a 719 PRINTS PR00811 Bacterial general secretion pathway protein D signature 593 603 8.7E-18 T 15-10-2018 IPR001775 GspD/PilQ family THII_3933 e36e11a3c5fc6093275b22019035c36a 719 Gene3D G3DSA:3.30.1370.120 363 459 6.7E-27 T 15-10-2018 IPR038591 NolW-like superfamily THII_3933 e36e11a3c5fc6093275b22019035c36a 719 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 661 694 - T 15-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 THII_3933 e36e11a3c5fc6093275b22019035c36a 719 Pfam PF03958 Bacterial type II/III secretion system short domain 393 458 4.1E-12 T 15-10-2018 IPR005644 NolW-like THII_3933 e36e11a3c5fc6093275b22019035c36a 719 Gene3D G3DSA:3.55.50.30 293 362 2.9E-5 T 15-10-2018 THII_3933 e36e11a3c5fc6093275b22019035c36a 719 PRINTS PR01032 Gene IV protein signature 539 562 2.9E-6 T 15-10-2018 THII_3933 e36e11a3c5fc6093275b22019035c36a 719 PRINTS PR01032 Gene IV protein signature 696 718 2.9E-6 T 15-10-2018 THII_3933 e36e11a3c5fc6093275b22019035c36a 719 PRINTS PR01032 Gene IV protein signature 643 671 2.9E-6 T 15-10-2018 THII_3933 e36e11a3c5fc6093275b22019035c36a 719 SMART SM00965 319 367 2.4E-5 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 THII_3799 c2d4e5e30bf573ed0a44b018e934a10f 361 Gene3D G3DSA:3.40.50.620 22 223 1.6E-61 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3799 c2d4e5e30bf573ed0a44b018e934a10f 361 SUPERFAMILY SSF52402 25 223 1.19E-48 T 15-10-2018 THII_3799 c2d4e5e30bf573ed0a44b018e934a10f 361 PIRSF PIRSF000089 22 355 7.7E-112 T 15-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 THII_3799 c2d4e5e30bf573ed0a44b018e934a10f 361 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 231 313 1.2E-36 T 15-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 THII_3799 c2d4e5e30bf573ed0a44b018e934a10f 361 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 294 320 - T 15-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 THII_3799 c2d4e5e30bf573ed0a44b018e934a10f 361 SUPERFAMILY SSF52467 230 349 6.0E-47 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily THII_3799 c2d4e5e30bf573ed0a44b018e934a10f 361 SMART SM00893 26 218 2.8E-39 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 THII_3799 c2d4e5e30bf573ed0a44b018e934a10f 361 Pfam PF01012 Electron transfer flavoprotein domain 26 204 1.6E-37 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 THII_3799 c2d4e5e30bf573ed0a44b018e934a10f 361 Gene3D G3DSA:3.40.50.1220 226 359 5.3E-54 T 15-10-2018 THII_3696 4973b5e3ba43542d8170ff9374e8a599 344 Gene3D G3DSA:3.30.70.2130 81 219 2.6E-7 T 15-10-2018 THII_3696 4973b5e3ba43542d8170ff9374e8a599 344 PIRSF PIRSF015283 11 342 1.3E-70 T 15-10-2018 IPR016631 Regulatory, RpfE THII_3261 c949e5ad4b88becd2ca801c5f1b02237 848 Pfam PF00384 Molybdopterin oxidoreductase 126 578 3.0E-66 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_3261 c949e5ad4b88becd2ca801c5f1b02237 848 Gene3D G3DSA:3.40.50.740 47 336 4.5E-73 T 15-10-2018 THII_3261 c949e5ad4b88becd2ca801c5f1b02237 848 SUPERFAMILY SSF53706 59 709 1.44E-138 T 15-10-2018 THII_3261 c949e5ad4b88becd2ca801c5f1b02237 848 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 743 770 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 THII_3261 c949e5ad4b88becd2ca801c5f1b02237 848 Gene3D G3DSA:2.40.40.20 683 829 2.8E-42 T 15-10-2018 THII_3261 c949e5ad4b88becd2ca801c5f1b02237 848 Gene3D G3DSA:3.40.228.10 346 422 2.4E-12 T 15-10-2018 THII_3261 c949e5ad4b88becd2ca801c5f1b02237 848 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 15 34 1.7E-6 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_3261 c949e5ad4b88becd2ca801c5f1b02237 848 Gene3D G3DSA:3.40.50.740 427 643 3.4E-33 T 15-10-2018 THII_3261 c949e5ad4b88becd2ca801c5f1b02237 848 SUPERFAMILY SSF50692 692 825 4.97E-38 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily THII_3261 c949e5ad4b88becd2ca801c5f1b02237 848 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 17 44 3.4E-6 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_3261 c949e5ad4b88becd2ca801c5f1b02237 848 Pfam PF01568 Molydopterin dinucleotide binding domain 707 809 1.4E-21 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 THII_3256 601ff76ff0766cb623d35be342029887 227 Gene3D G3DSA:3.90.1570.10 9 195 1.7E-12 T 15-10-2018 THII_3256 601ff76ff0766cb623d35be342029887 227 Pfam PF05685 Putative restriction endonuclease 22 191 1.0E-28 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3256 601ff76ff0766cb623d35be342029887 227 SUPERFAMILY SSF52980 10 194 3.7E-33 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0029 f101c89d44f006b3f304996112ac2a0a 339 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 9.3E-25 T 15-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 THII_0029 f101c89d44f006b3f304996112ac2a0a 339 Gene3D G3DSA:3.30.930.10 7 339 4.5E-126 T 15-10-2018 THII_0029 f101c89d44f006b3f304996112ac2a0a 339 Pfam PF01409 tRNA synthetases class II core domain (F) 92 337 1.1E-109 T 15-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 THII_0029 f101c89d44f006b3f304996112ac2a0a 339 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 337 50.479 T 15-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 THII_0029 f101c89d44f006b3f304996112ac2a0a 339 SUPERFAMILY SSF46589 14 99 3.24E-22 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 THII_0029 f101c89d44f006b3f304996112ac2a0a 339 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 338 2.3E-110 T 15-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 THII_0029 f101c89d44f006b3f304996112ac2a0a 339 SUPERFAMILY SSF55681 92 338 1.14E-85 T 15-10-2018 THII_0920 777d13d74ff9f8ba8bff11e964fe338f 324 Hamap MF_01694 Biotin synthase [bioB]. 15 323 40.943 T 15-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 THII_0920 777d13d74ff9f8ba8bff11e964fe338f 324 PIRSF PIRSF001619 4 324 3.2E-124 T 15-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 THII_0920 777d13d74ff9f8ba8bff11e964fe338f 324 SMART SM00729 53 265 4.3E-36 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_0920 777d13d74ff9f8ba8bff11e964fe338f 324 SUPERFAMILY SSF102114 15 322 4.45E-83 T 15-10-2018 THII_0920 777d13d74ff9f8ba8bff11e964fe338f 324 TIGRFAM TIGR00433 bioB: biotin synthase 25 321 2.8E-116 T 15-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 THII_0920 777d13d74ff9f8ba8bff11e964fe338f 324 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 230 321 7.1E-19 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 THII_0920 777d13d74ff9f8ba8bff11e964fe338f 324 SMART SM00876 230 322 1.5E-41 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 THII_0920 777d13d74ff9f8ba8bff11e964fe338f 324 Gene3D G3DSA:3.20.20.70 14 324 2.7E-122 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0920 777d13d74ff9f8ba8bff11e964fe338f 324 Pfam PF04055 Radical SAM superfamily 60 216 3.8E-11 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_3039 4c67bc24c37b1ab3b7ef5d7ce6d19cb1 201 SUPERFAMILY SSF89392 22 199 1.22E-49 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX THII_3039 4c67bc24c37b1ab3b7ef5d7ce6d19cb1 201 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 28 190 1.6E-48 T 15-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like THII_3039 4c67bc24c37b1ab3b7ef5d7ce6d19cb1 201 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 13 197 8.4E-30 T 15-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 THII_3039 4c67bc24c37b1ab3b7ef5d7ce6d19cb1 201 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 200 30.285 T 15-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 THII_3039 4c67bc24c37b1ab3b7ef5d7ce6d19cb1 201 Gene3D G3DSA:2.50.20.10 21 199 5.8E-54 T 15-10-2018 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 642 36.694 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 Gene3D G3DSA:3.30.420.40 5 379 8.6E-167 T 15-10-2018 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 4.8E-290 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 Gene3D G3DSA:3.90.640.10 229 316 8.6E-167 T 15-10-2018 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 SUPERFAMILY SSF53067 4 184 1.81E-66 T 15-10-2018 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.0E-82 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.0E-82 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 PRINTS PR00301 70kDa heat shock protein signature 469 485 3.0E-82 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 PRINTS PR00301 70kDa heat shock protein signature 198 208 3.0E-82 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.0E-82 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 PRINTS PR00301 70kDa heat shock protein signature 334 350 3.0E-82 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.0E-82 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 PRINTS PR00301 70kDa heat shock protein signature 365 385 3.0E-82 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 PRINTS PR00301 70kDa heat shock protein signature 388 407 3.0E-82 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 Gene3D G3DSA:3.30.420.40 180 366 8.6E-167 T 15-10-2018 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 Gene3D G3DSA:2.60.34.10 383 523 7.5E-63 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 SUPERFAMILY SSF100934 507 605 5.89E-21 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 Pfam PF00012 Hsp70 protein 4 603 3.9E-265 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 Gene3D G3DSA:1.20.1270.10 524 607 2.5E-26 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 SUPERFAMILY SSF53067 190 382 1.83E-67 T 15-10-2018 THII_2710 9cb6a83ed2f75c0735a4e40cda34b0cb 647 SUPERFAMILY SSF100920 384 540 3.53E-59 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 THII_3177 fe53393a58874f26a47cb796f190627b 447 Gene3D G3DSA:3.40.1160.10 16 298 6.9E-91 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily THII_3177 fe53393a58874f26a47cb796f190627b 447 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 18 446 4.2E-174 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 THII_3177 fe53393a58874f26a47cb796f190627b 447 SUPERFAMILY SSF53633 15 297 7.4E-63 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily THII_3177 fe53393a58874f26a47cb796f190627b 447 Pfam PF00583 Acetyltransferase (GNAT) family 339 405 2.6E-5 T 15-10-2018 IPR000182 GNAT domain THII_3177 fe53393a58874f26a47cb796f190627b 447 SUPERFAMILY SSF55729 301 422 1.89E-17 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_3177 fe53393a58874f26a47cb796f190627b 447 PIRSF PIRSF000423 8 446 3.1E-185 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 THII_3177 fe53393a58874f26a47cb796f190627b 447 Gene3D G3DSA:3.40.630.30 299 446 4.0E-37 T 15-10-2018 THII_3177 fe53393a58874f26a47cb796f190627b 447 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 446 193.942 T 15-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 THII_3177 fe53393a58874f26a47cb796f190627b 447 Pfam PF00696 Amino acid kinase family 36 272 2.4E-24 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 THII_3705 56ccb3a044acff8b349d6e98c148f1b5 222 SUPERFAMILY SSF54001 48 217 3.78E-46 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily THII_3705 56ccb3a044acff8b349d6e98c148f1b5 222 Gene3D G3DSA:3.90.1720.10 34 221 4.6E-57 T 15-10-2018 THII_3705 56ccb3a044acff8b349d6e98c148f1b5 222 Pfam PF05257 CHAP domain 82 181 5.4E-15 T 15-10-2018 IPR007921 CHAP domain THII_0110 8a9b318dd8091064c47118319e2f87d9 199 SUPERFAMILY SSF52833 32 191 4.56E-45 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_0110 8a9b318dd8091064c47118319e2f87d9 199 Pfam PF02630 SCO1/SenC 30 175 2.7E-34 T 15-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0110 8a9b318dd8091064c47118319e2f87d9 199 Gene3D G3DSA:3.40.30.10 27 193 1.0E-48 T 15-10-2018 THII_2634 8c1a0e93b7d0cfb059a7e4c49f1fcfe5 456 SUPERFAMILY SSF52540 10 382 2.12E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2634 8c1a0e93b7d0cfb059a7e4c49f1fcfe5 456 Pfam PF13175 AAA ATPase domain 9 371 2.9E-28 T 15-10-2018 THII_3843 388b9a9a855a64aac16a16dd52820375 150 Pfam PF00114 Pilin (bacterial filament) 38 149 9.2E-10 T 15-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 THII_3843 388b9a9a855a64aac16a16dd52820375 150 Gene3D G3DSA:3.30.700.10 9 150 1.2E-32 T 15-10-2018 THII_3843 388b9a9a855a64aac16a16dd52820375 150 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 3.5E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3843 388b9a9a855a64aac16a16dd52820375 150 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 3.0E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3843 388b9a9a855a64aac16a16dd52820375 150 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3843 388b9a9a855a64aac16a16dd52820375 150 SUPERFAMILY SSF54523 9 149 3.87E-26 T 15-10-2018 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 Pfam PF00072 Response regulator receiver domain 778 860 6.6E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 Pfam PF00072 Response regulator receiver domain 656 764 5.2E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 Gene3D G3DSA:3.40.50.2300 771 894 1.8E-27 T 15-10-2018 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 Gene3D G3DSA:1.20.1480.50 303 390 6.6E-8 T 15-10-2018 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 401 469 3.0E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SUPERFAMILY SSF55874 458 633 6.55E-27 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SMART SM00448 776 888 9.0E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SMART SM00448 654 764 1.7E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SMART SM00388 401 469 4.1E-25 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 Gene3D G3DSA:1.10.287.130 391 470 4.1E-24 T 15-10-2018 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SMART SM00387 515 632 5.3E-10 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 Gene3D G3DSA:3.30.450.20 220 302 3.0E-5 T 15-10-2018 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SUPERFAMILY SSF103190 222 300 5.57E-11 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SUPERFAMILY SSF52172 656 767 7.68E-33 T 15-10-2018 IPR011006 CheY-like superfamily THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 Gene3D G3DSA:3.30.450.20 89 219 1.9E-29 T 15-10-2018 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 Gene3D G3DSA:3.30.565.10 471 636 2.1E-27 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 Gene3D G3DSA:3.40.50.12740 655 770 1.2E-35 T 15-10-2018 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SUPERFAMILY SSF47384 386 471 5.69E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SMART SM00304 334 386 6.8E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SUPERFAMILY SSF158472 335 382 2.09E-7 T 15-10-2018 THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SUPERFAMILY SSF52172 778 892 1.01E-26 T 15-10-2018 IPR011006 CheY-like superfamily THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 SUPERFAMILY SSF103190 40 218 2.51E-35 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily THII_1161 dc89d7afb2911902774a98ef0e1f97d6 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 518 631 2.6E-11 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3373 9e394ecffb74ff897478968779513199 195 Gene3D G3DSA:3.30.565.10 38 194 4.2E-7 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1242 6b21fe663ccdacafef8c1254de91e707 335 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 234 251 1.6E-19 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_1242 6b21fe663ccdacafef8c1254de91e707 335 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 67 87 1.6E-19 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_1242 6b21fe663ccdacafef8c1254de91e707 335 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 34 48 1.6E-19 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_1242 6b21fe663ccdacafef8c1254de91e707 335 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 276 296 1.6E-19 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_1242 6b21fe663ccdacafef8c1254de91e707 335 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 253 271 1.6E-19 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_1242 6b21fe663ccdacafef8c1254de91e707 335 SUPERFAMILY SSF53335 9 297 1.64E-66 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1242 6b21fe663ccdacafef8c1254de91e707 335 Pfam PF01555 DNA methylase 35 290 2.1E-36 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 THII_1242 6b21fe663ccdacafef8c1254de91e707 335 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 39 44 - T 15-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 THII_2273 b80f6aee2b8555c1f2ace2130eda5841 162 Pfam PF03168 Late embryogenesis abundant protein 52 135 5.0E-13 T 15-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup THII_2273 b80f6aee2b8555c1f2ace2130eda5841 162 SUPERFAMILY SSF117070 10 151 9.81E-28 T 15-10-2018 THII_2273 b80f6aee2b8555c1f2ace2130eda5841 162 SMART SM00769 32 146 4.8E-13 T 15-10-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 THII_2273 b80f6aee2b8555c1f2ace2130eda5841 162 Gene3D G3DSA:2.60.40.1820 23 152 7.2E-17 T 15-10-2018 THII_3763 f54093d6082a03929ae7c66f3fd178d0 250 Gene3D G3DSA:1.25.40.10 31 208 5.6E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3763 f54093d6082a03929ae7c66f3fd178d0 250 SUPERFAMILY SSF48452 60 139 4.05E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2691 8bac32e67d2f2573338fcb2da69e3f7e 226 SUPERFAMILY SSF53335 21 210 3.65E-22 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2691 8bac32e67d2f2573338fcb2da69e3f7e 226 Pfam PF13649 Methyltransferase domain 48 140 8.3E-11 T 15-10-2018 THII_2691 8bac32e67d2f2573338fcb2da69e3f7e 226 Gene3D G3DSA:3.40.50.150 10 222 2.4E-22 T 15-10-2018 THII_0567 5caaf3cc82c5f2fe7bc6d629d6ff179d 325 Pfam PF01867 CRISPR associated protein Cas1 3 287 4.2E-73 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 THII_0567 5caaf3cc82c5f2fe7bc6d629d6ff179d 325 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 3 323 5.4E-78 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 THII_0567 5caaf3cc82c5f2fe7bc6d629d6ff179d 325 Gene3D G3DSA:3.100.10.20 1 77 1.5E-19 T 15-10-2018 THII_0567 5caaf3cc82c5f2fe7bc6d629d6ff179d 325 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 1 318 21.476 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 THII_0567 5caaf3cc82c5f2fe7bc6d629d6ff179d 325 Gene3D G3DSA:1.20.120.920 81 325 3.0E-65 T 15-10-2018 THII_2851 d790bc1e61f4af41de30497174fb2f93 247 SUPERFAMILY SSF54523 135 242 3.19E-16 T 15-10-2018 THII_2851 d790bc1e61f4af41de30497174fb2f93 247 Pfam PF05154 TM2 domain 47 95 6.4E-12 T 15-10-2018 IPR007829 TM2 domain THII_2851 d790bc1e61f4af41de30497174fb2f93 247 Pfam PF00114 Pilin (bacterial filament) 143 242 4.3E-14 T 15-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 THII_2851 d790bc1e61f4af41de30497174fb2f93 247 Gene3D G3DSA:3.30.700.10 127 247 5.9E-18 T 15-10-2018 THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 SUPERFAMILY SSF141072 1803 1914 1.24E-20 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 Pfam PF03160 Calx-beta domain 1794 1891 2.6E-11 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 Pfam PF03160 Calx-beta domain 1543 1632 2.1E-19 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 Pfam PF03160 Calx-beta domain 1704 1778 6.9E-9 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 Gene3D G3DSA:2.60.40.2030 1531 1652 1.8E-30 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 SMART SM00237 1792 1892 0.0027 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 SMART SM00237 1669 1778 0.0062 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 SMART SM00237 1529 1632 7.9E-22 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 49 72 8.2E-8 T 15-10-2018 IPR026457 CSLREA domain THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 Gene3D G3DSA:2.60.40.2030 1684 1801 1.4E-21 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 Gene3D G3DSA:2.60.40.2030 1804 1913 1.6E-18 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 SUPERFAMILY SSF51126 35 410 1.52E-25 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 SUPERFAMILY SSF141072 1682 1802 1.12E-22 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0506 ef2f9561b894892e7f05af95b67cc7d0 2324 SUPERFAMILY SSF141072 1542 1655 1.31E-30 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1748 d994817de7950a195cb6ba27ddb91eec 257 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 42.083 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 THII_1748 d994817de7950a195cb6ba27ddb91eec 257 Gene3D G3DSA:3.90.230.10 1 256 4.3E-115 T 15-10-2018 THII_1748 d994817de7950a195cb6ba27ddb91eec 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 8.7E-23 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 THII_1748 d994817de7950a195cb6ba27ddb91eec 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 8.7E-23 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 THII_1748 d994817de7950a195cb6ba27ddb91eec 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 8.7E-23 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 THII_1748 d994817de7950a195cb6ba27ddb91eec 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 8.7E-23 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 THII_1748 d994817de7950a195cb6ba27ddb91eec 257 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 249 1.8E-100 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 THII_1748 d994817de7950a195cb6ba27ddb91eec 257 Pfam PF00557 Metallopeptidase family M24 12 241 2.8E-55 T 15-10-2018 IPR000994 Peptidase M24 THII_1748 d994817de7950a195cb6ba27ddb91eec 257 SUPERFAMILY SSF55920 4 257 9.29E-94 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like THII_1748 d994817de7950a195cb6ba27ddb91eec 257 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 THII_3569 3840890d1be34929bb93e708a34adb05 196 PIRSF PIRSF004649 1 196 6.9E-45 T 15-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC THII_3569 3840890d1be34929bb93e708a34adb05 196 Pfam PF05494 MlaC protein 33 189 1.1E-44 T 15-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC THII_3569 3840890d1be34929bb93e708a34adb05 196 Gene3D G3DSA:3.10.450.710 23 195 7.2E-45 T 15-10-2018 THII_3163 72cabf273384c30638fa40f7b9a79616 174 SUPERFAMILY SSF53955 33 170 3.56E-36 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_3163 72cabf273384c30638fa40f7b9a79616 174 Gene3D G3DSA:1.10.530.10 34 170 7.7E-35 T 15-10-2018 THII_3163 72cabf273384c30638fa40f7b9a79616 174 Pfam PF01464 Transglycosylase SLT domain 52 151 4.5E-24 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 THII_1907 08850efb5b602c141f81dfcfa965a293 577 SUPERFAMILY SSF57783 5 101 7.31E-35 T 15-10-2018 THII_1907 08850efb5b602c141f81dfcfa965a293 577 Gene3D G3DSA:3.90.980.10 113 238 7.4E-42 T 15-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily THII_1907 08850efb5b602c141f81dfcfa965a293 577 SMART SM00400 36 90 5.5E-36 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 THII_1907 08850efb5b602c141f81dfcfa965a293 577 Gene3D G3DSA:3.40.1360.10 239 364 2.8E-38 T 15-10-2018 THII_1907 08850efb5b602c141f81dfcfa965a293 577 Gene3D G3DSA:1.20.50.20 365 416 2.6E-13 T 15-10-2018 THII_1907 08850efb5b602c141f81dfcfa965a293 577 Pfam PF08275 DNA primase catalytic core, N-terminal domain 124 249 5.0E-40 T 15-10-2018 IPR013264 DNA primase, catalytic core, N-terminal THII_1907 08850efb5b602c141f81dfcfa965a293 577 Hamap MF_00974 DNA primase [dnaG]. 4 563 28.045 T 15-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 THII_1907 08850efb5b602c141f81dfcfa965a293 577 SMART SM00493 256 327 7.0E-16 T 15-10-2018 IPR006171 TOPRIM domain THII_1907 08850efb5b602c141f81dfcfa965a293 577 Gene3D G3DSA:3.90.580.10 1 102 1.9E-37 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 THII_1907 08850efb5b602c141f81dfcfa965a293 577 Pfam PF08278 DNA primase DnaG DnaB-binding 454 558 6.1E-12 T 15-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 THII_1907 08850efb5b602c141f81dfcfa965a293 577 Gene3D G3DSA:1.10.860.10 441 571 4.1E-16 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal THII_1907 08850efb5b602c141f81dfcfa965a293 577 PIRSF PIRSF002811 2 575 3.9E-140 T 15-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 THII_1907 08850efb5b602c141f81dfcfa965a293 577 Pfam PF13662 Toprim domain 258 335 1.4E-16 T 15-10-2018 IPR006171 TOPRIM domain THII_1907 08850efb5b602c141f81dfcfa965a293 577 TIGRFAM TIGR01391 dnaG: DNA primase 5 409 2.7E-137 T 15-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 THII_1907 08850efb5b602c141f81dfcfa965a293 577 SUPERFAMILY SSF117023 450 558 6.02E-13 T 15-10-2018 THII_1907 08850efb5b602c141f81dfcfa965a293 577 Pfam PF01807 CHC2 zinc finger 6 101 7.3E-40 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 THII_1907 08850efb5b602c141f81dfcfa965a293 577 SUPERFAMILY SSF56731 113 414 1.96E-101 T 15-10-2018 THII_1907 08850efb5b602c141f81dfcfa965a293 577 Pfam PF10410 DnaB-helicase binding domain of primase 367 420 1.4E-9 T 15-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 THII_3137 74357955ae80aa6e4b8003305ccfd7c8 367 Pfam PF13673 Acetyltransferase (GNAT) domain 20 128 1.5E-13 T 15-10-2018 IPR000182 GNAT domain THII_3137 74357955ae80aa6e4b8003305ccfd7c8 367 Pfam PF11814 Peptidase_C39 like family 157 362 1.3E-87 T 15-10-2018 IPR021770 Protein of unknown function DUF3335 THII_3137 74357955ae80aa6e4b8003305ccfd7c8 367 SUPERFAMILY SSF55729 1 146 5.75E-28 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_3137 74357955ae80aa6e4b8003305ccfd7c8 367 Gene3D G3DSA:3.40.630.30 1 151 8.2E-31 T 15-10-2018 THII_1564 ea0bedc5c945b193671970fbbf4f6a9c 473 SUPERFAMILY SSF81301 49 197 2.07E-38 T 15-10-2018 THII_1564 ea0bedc5c945b193671970fbbf4f6a9c 473 Gene3D G3DSA:1.10.3090.10 199 447 3.5E-85 T 15-10-2018 THII_1564 ea0bedc5c945b193671970fbbf4f6a9c 473 Pfam PF12626 Polymerase A arginine-rich C-terminus 348 462 1.7E-32 T 15-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain THII_1564 ea0bedc5c945b193671970fbbf4f6a9c 473 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 228 290 8.5E-21 T 15-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 THII_1564 ea0bedc5c945b193671970fbbf4f6a9c 473 SUPERFAMILY SSF81891 199 434 1.57E-49 T 15-10-2018 THII_1564 ea0bedc5c945b193671970fbbf4f6a9c 473 Gene3D G3DSA:3.30.460.10 43 198 6.1E-56 T 15-10-2018 THII_1564 ea0bedc5c945b193671970fbbf4f6a9c 473 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 45 461 9.5E-148 T 15-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 THII_1564 ea0bedc5c945b193671970fbbf4f6a9c 473 Pfam PF01743 Poly A polymerase head domain 75 201 3.5E-35 T 15-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 THII_1564 ea0bedc5c945b193671970fbbf4f6a9c 473 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 39 463 36.45 T 15-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Gene3D G3DSA:1.20.1640.10 546 601 1.6E-170 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 SUPERFAMILY SSF82693 151 360 7.32E-11 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Gene3D G3DSA:3.30.70.1430 602 727 1.6E-170 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Gene3D G3DSA:3.30.70.1320 151 363 1.6E-170 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 SUPERFAMILY SSF82866 948 1117 3.53E-38 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Gene3D G3DSA:1.20.1640.10 33 545 1.6E-170 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 SUPERFAMILY SSF82866 329 529 1.05E-37 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Gene3D G3DSA:3.30.70.1440 950 960 4.8E-47 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Gene3D G3DSA:3.30.70.1430 57 876 1.6E-170 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 PRINTS PR00702 Acriflavin resistance protein family signature 423 447 1.0E-26 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 1.0E-26 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 PRINTS PR00702 Acriflavin resistance protein family signature 395 416 1.0E-26 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 PRINTS PR00702 Acriflavin resistance protein family signature 55 73 1.0E-26 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 PRINTS PR00702 Acriflavin resistance protein family signature 502 525 1.0E-26 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Gene3D G3DSA:3.30.2090.10 195 287 1.6E-170 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Gene3D G3DSA:3.30.70.1440 728 885 1.6E-170 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Gene3D G3DSA:3.30.2090.10 778 868 1.6E-170 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 SUPERFAMILY SSF82693 57 151 6.63E-22 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 SUPERFAMILY SSF82714 199 281 5.36E-15 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Gene3D G3DSA:1.20.1640.10 961 1112 4.8E-47 T 15-10-2018 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Pfam PF00873 AcrB/AcrD/AcrF family 21 861 5.1E-111 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 Pfam PF00873 AcrB/AcrD/AcrF family 950 1112 3.4E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_0902 42656c905c3121526dcffedf9a0e50a7 1422 SUPERFAMILY SSF82714 779 861 5.1E-9 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_2677 d75a077df60302abc02789f21231a7c9 331 Pfam PF01136 Peptidase family U32 76 330 1.5E-64 T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 THII_2677 d75a077df60302abc02789f21231a7c9 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 THII_1332 e6818005b8067134d2e54443337e6ccc 198 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 THII_1332 e6818005b8067134d2e54443337e6ccc 198 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 35.031 T 15-10-2018 IPR022927 RNA pyrophosphohydrolase RppH THII_1332 e6818005b8067134d2e54443337e6ccc 198 Pfam PF00293 NUDIX domain 7 141 1.1E-22 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 THII_1332 e6818005b8067134d2e54443337e6ccc 198 SUPERFAMILY SSF55811 3 152 7.04E-28 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 THII_1332 e6818005b8067134d2e54443337e6ccc 198 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.5E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 THII_1332 e6818005b8067134d2e54443337e6ccc 198 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.5E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 THII_1332 e6818005b8067134d2e54443337e6ccc 198 Gene3D G3DSA:3.90.79.10 1 157 4.4E-42 T 15-10-2018 THII_2296 ff5aaca303aafea611d0b6a58cb91d00 284 Gene3D G3DSA:3.40.50.150 73 273 2.2E-56 T 15-10-2018 THII_2296 ff5aaca303aafea611d0b6a58cb91d00 284 SMART SM00138 8 271 9.2E-33 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2296 ff5aaca303aafea611d0b6a58cb91d00 284 SUPERFAMILY SSF47757 4 61 1.26E-6 T 15-10-2018 THII_2296 ff5aaca303aafea611d0b6a58cb91d00 284 SUPERFAMILY SSF53335 74 253 1.23E-37 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2296 ff5aaca303aafea611d0b6a58cb91d00 284 Pfam PF01739 CheR methyltransferase, SAM binding domain 74 254 4.6E-40 T 15-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THII_2296 ff5aaca303aafea611d0b6a58cb91d00 284 PRINTS PR00996 Glutamate methyltransferase family signature 228 251 1.7E-23 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2296 ff5aaca303aafea611d0b6a58cb91d00 284 PRINTS PR00996 Glutamate methyltransferase family signature 209 223 1.7E-23 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2296 ff5aaca303aafea611d0b6a58cb91d00 284 PRINTS PR00996 Glutamate methyltransferase family signature 135 151 1.7E-23 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2296 ff5aaca303aafea611d0b6a58cb91d00 284 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 1.7E-23 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2296 ff5aaca303aafea611d0b6a58cb91d00 284 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 1.7E-23 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2296 ff5aaca303aafea611d0b6a58cb91d00 284 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 58 2.4E-13 T 15-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal THII_1569 727abef92e7b33fbf4ffd93cfe7b08ff 533 Pfam PF10119 Predicted methyltransferase regulatory domain 220 301 2.8E-24 T 15-10-2018 IPR018773 Methyltransferase regulatory domain, predicted THII_1569 727abef92e7b33fbf4ffd93cfe7b08ff 533 SUPERFAMILY SSF53335 4 174 8.22E-29 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1569 727abef92e7b33fbf4ffd93cfe7b08ff 533 Gene3D G3DSA:3.40.50.150 7 262 2.3E-24 T 15-10-2018 THII_1569 727abef92e7b33fbf4ffd93cfe7b08ff 533 Pfam PF13847 Methyltransferase domain 48 171 1.3E-16 T 15-10-2018 IPR025714 Methyltransferase domain THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 184 286 2.3E-10 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 SUPERFAMILY SSF53738 278 414 2.08E-36 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 153 7.4E-36 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 460 517 4.1E-6 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 Gene3D G3DSA:3.40.120.10 291 388 6.3E-38 T 15-10-2018 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 Gene3D G3DSA:3.40.120.10 189 290 5.0E-37 T 15-10-2018 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 107 116 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 Gene3D G3DSA:3.30.310.50 389 543 2.6E-61 T 15-10-2018 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 241 254 3.1E-21 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 106 120 3.1E-21 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 205 224 3.1E-21 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 270 285 3.1E-21 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 SUPERFAMILY SSF53738 2 212 1.59E-49 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 Gene3D G3DSA:3.40.120.10 2 188 5.6E-83 T 15-10-2018 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 294 407 3.2E-31 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1311 f283b87b66ac178d6565fa6233a74cb7 543 SUPERFAMILY SSF55957 409 543 2.49E-47 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2444 ce0324481840972f4467efd7afb89ad8 241 SUPERFAMILY SSF47757 1 42 9.55E-10 T 15-10-2018 THII_2444 ce0324481840972f4467efd7afb89ad8 241 PRINTS PR00996 Glutamate methyltransferase family signature 199 222 1.3E-38 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2444 ce0324481840972f4467efd7afb89ad8 241 PRINTS PR00996 Glutamate methyltransferase family signature 180 194 1.3E-38 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2444 ce0324481840972f4467efd7afb89ad8 241 PRINTS PR00996 Glutamate methyltransferase family signature 76 96 1.3E-38 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2444 ce0324481840972f4467efd7afb89ad8 241 PRINTS PR00996 Glutamate methyltransferase family signature 109 125 1.3E-38 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2444 ce0324481840972f4467efd7afb89ad8 241 PRINTS PR00996 Glutamate methyltransferase family signature 36 48 1.3E-38 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2444 ce0324481840972f4467efd7afb89ad8 241 Pfam PF01739 CheR methyltransferase, SAM binding domain 43 237 1.8E-66 T 15-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THII_2444 ce0324481840972f4467efd7afb89ad8 241 Gene3D G3DSA:3.40.50.150 42 240 4.0E-65 T 15-10-2018 THII_2444 ce0324481840972f4467efd7afb89ad8 241 Pfam PF03705 CheR methyltransferase, all-alpha domain 1 28 3.2E-8 T 15-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal THII_2444 ce0324481840972f4467efd7afb89ad8 241 SMART SM00138 1 240 3.8E-92 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_2444 ce0324481840972f4467efd7afb89ad8 241 Gene3D G3DSA:1.10.155.10 1 41 6.6E-12 T 15-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily THII_2444 ce0324481840972f4467efd7afb89ad8 241 SUPERFAMILY SSF53335 43 238 1.76E-52 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2444 ce0324481840972f4467efd7afb89ad8 241 PIRSF PIRSF000410 1 240 4.2E-92 T 15-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR THII_3365 c25d85fd8f479d55777b60ad4790f38e 286 SUPERFAMILY SSF48452 56 192 1.05E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3365 c25d85fd8f479d55777b60ad4790f38e 286 Gene3D G3DSA:1.25.40.10 52 168 4.3E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3365 c25d85fd8f479d55777b60ad4790f38e 286 Pfam PF09976 Tetratricopeptide repeat-like domain 16 210 2.3E-50 T 15-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00091 423 489 1.6E-10 T 15-10-2018 IPR000014 PAS domain THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00091 547 617 230.0 T 15-10-2018 IPR000014 PAS domain THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00091 676 744 4.4E-7 T 15-10-2018 IPR000014 PAS domain THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00091 286 354 3.5E-5 T 15-10-2018 IPR000014 PAS domain THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00091 805 871 6.4E-11 T 15-10-2018 IPR000014 PAS domain THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00448 1185 1298 3.0E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Gene3D G3DSA:1.10.287.130 916 1004 2.4E-30 T 15-10-2018 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Gene3D G3DSA:3.30.450.20 567 668 3.9E-17 T 15-10-2018 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SUPERFAMILY SSF55785 792 918 3.14E-26 T 15-10-2018 IPR035965 PAS domain superfamily THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00387 1053 1163 3.8E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Pfam PF00512 His Kinase A (phospho-acceptor) domain 940 1006 1.6E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Gene3D G3DSA:3.30.450.20 409 551 9.6E-22 T 15-10-2018 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SUPERFAMILY SSF55785 532 662 5.8E-16 T 15-10-2018 IPR035965 PAS domain superfamily THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Pfam PF08447 PAS fold 573 656 4.2E-14 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Pfam PF08447 PAS fold 699 787 3.2E-21 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Pfam PF08447 PAS fold 828 912 7.2E-14 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SUPERFAMILY SSF47384 925 1007 3.73E-24 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Gene3D G3DSA:3.30.450.20 669 789 1.6E-34 T 15-10-2018 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00086 751 793 2.5E-5 T 15-10-2018 IPR001610 PAC motif THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00086 622 664 0.0061 T 15-10-2018 IPR001610 PAC motif THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00086 495 535 0.19 T 15-10-2018 IPR001610 PAC motif THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00086 878 920 7.8E-6 T 15-10-2018 IPR001610 PAC motif THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00304 206 258 6.0E-5 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SUPERFAMILY SSF55785 410 533 1.93E-19 T 15-10-2018 IPR035965 PAS domain superfamily THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Gene3D G3DSA:3.40.50.12740 1184 1371 8.3E-35 T 15-10-2018 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Gene3D G3DSA:1.20.1480.50 170 264 1.4E-6 T 15-10-2018 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Pfam PF13426 PAS domain 435 534 3.2E-10 T 15-10-2018 IPR000014 PAS domain THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1123 1141 8.7E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1089 1103 8.7E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1107 1117 8.7E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1147 1160 8.7E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 283 399 1.1E-8 T 15-10-2018 IPR000014 PAS domain THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 546 671 1.1E-9 T 15-10-2018 IPR000014 PAS domain THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 801 925 9.8E-25 T 15-10-2018 IPR000014 PAS domain THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 672 800 3.9E-14 T 15-10-2018 IPR000014 PAS domain THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 419 542 8.3E-21 T 15-10-2018 IPR000014 PAS domain THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SMART SM00388 940 1006 2.6E-25 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SUPERFAMILY SSF55785 661 791 7.73E-25 T 15-10-2018 IPR035965 PAS domain superfamily THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Gene3D G3DSA:3.30.565.10 1005 1164 1.0E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1054 1162 1.9E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SUPERFAMILY SSF52172 1183 1316 6.12E-35 T 15-10-2018 IPR011006 CheY-like superfamily THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SUPERFAMILY SSF55874 995 1161 1.83E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Pfam PF00072 Response regulator receiver domain 1187 1298 3.2E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 SUPERFAMILY SSF55785 271 384 1.29E-14 T 15-10-2018 IPR035965 PAS domain superfamily THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Gene3D G3DSA:3.30.450.20 274 398 2.9E-16 T 15-10-2018 THII_3447 e5ccdc80ff00aae3240dc1da476018a9 1392 Gene3D G3DSA:3.30.450.20 790 915 8.7E-25 T 15-10-2018 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 SMART SM00448 2350 2463 1.2E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 Gene3D G3DSA:3.30.565.10 2000 2186 1.7E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 Pfam PF01584 CheW-like domain 2192 2323 1.5E-11 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 Pfam PF01627 Hpt domain 1687 1784 7.3E-13 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 SMART SM00260 2179 2321 2.7E-8 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2091 2105 1.1E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2171 2184 1.1E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2147 2165 1.1E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 Gene3D G3DSA:3.40.50.12740 2350 2470 1.6E-34 T 15-10-2018 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 2049 2186 5.7E-13 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 SUPERFAMILY SSF55874 2003 2184 1.28E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 SUPERFAMILY SSF50341 2186 2321 4.19E-17 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 Pfam PF00072 Response regulator receiver domain 2352 2462 5.4E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 SMART SM00073 1685 1781 2.1E-10 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 Gene3D G3DSA:2.30.30.40 2187 2316 7.3E-23 T 15-10-2018 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 Gene3D G3DSA:2.40.50.180 2210 2276 7.3E-23 T 15-10-2018 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 SMART SM01231 1860 2001 8.5E-5 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 SUPERFAMILY SSF52172 2350 2468 3.98E-34 T 15-10-2018 IPR011006 CheY-like superfamily THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 SUPERFAMILY SSF47226 1686 1794 4.84E-22 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 SMART SM00387 2046 2187 2.6E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1988 efa928fbc4116d31bd0a24923f7c8ce9 2471 Gene3D G3DSA:1.20.120.160 1682 1817 2.5E-21 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_0626 2c68722b27ee303cc3c493f9ad9996b7 372 Gene3D G3DSA:1.10.287.470 98 165 1.2E-56 T 15-10-2018 THII_0626 2c68722b27ee303cc3c493f9ad9996b7 372 Gene3D G3DSA:2.40.50.100 59 200 1.2E-56 T 15-10-2018 THII_0626 2c68722b27ee303cc3c493f9ad9996b7 372 Gene3D G3DSA:2.40.30.170 46 277 1.2E-56 T 15-10-2018 THII_0626 2c68722b27ee303cc3c493f9ad9996b7 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 271 4.8E-20 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THII_0626 2c68722b27ee303cc3c493f9ad9996b7 372 Gene3D G3DSA:2.40.420.20 37 330 1.2E-56 T 15-10-2018 THII_0626 2c68722b27ee303cc3c493f9ad9996b7 372 SUPERFAMILY SSF111369 51 275 3.4E-20 T 15-10-2018 THII_0626 2c68722b27ee303cc3c493f9ad9996b7 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 351 1.2E-60 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 THII_1000 614f003e9512fb6e8795c94cf4028788 420 SUPERFAMILY SSF48371 103 287 3.13E-7 T 15-10-2018 IPR016024 Armadillo-type fold THII_1000 614f003e9512fb6e8795c94cf4028788 420 TIGRFAM TIGR02270 TIGR02270: conserved hypothetical protein 7 414 1.3E-118 T 15-10-2018 IPR011959 Conserved hypothetical protein CHP02270 THII_1000 614f003e9512fb6e8795c94cf4028788 420 Gene3D G3DSA:1.25.10.10 56 226 4.3E-6 T 15-10-2018 IPR011989 Armadillo-like helical THII_0157 7737e1454c5d42e4c082e5cfddd46ef7 118 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 118 36.03 T 15-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 THII_0157 7737e1454c5d42e4c082e5cfddd46ef7 118 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 15 118 2.4E-38 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 THII_0157 7737e1454c5d42e4c082e5cfddd46ef7 118 Gene3D G3DSA:2.60.300.12 13 118 2.3E-34 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 THII_0157 7737e1454c5d42e4c082e5cfddd46ef7 118 SUPERFAMILY SSF89360 10 104 2.75E-31 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 THII_0157 7737e1454c5d42e4c082e5cfddd46ef7 118 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 99 116 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 THII_0157 7737e1454c5d42e4c082e5cfddd46ef7 118 Pfam PF01521 Iron-sulphur cluster biosynthesis 14 113 1.6E-18 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 THII_2829 6cf794dba6393ec126fc44c3e6f6e659 145 Pfam PF01724 Domain of unknown function DUF29 7 143 2.0E-52 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2829 6cf794dba6393ec126fc44c3e6f6e659 145 Gene3D G3DSA:1.20.1220.20 1 145 2.3E-34 T 15-10-2018 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 Pfam PF07687 Peptidase dimerisation domain 208 289 8.9E-8 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 Pfam PF01546 Peptidase family M20/M25/M40 69 477 1.1E-13 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 PRINTS PR00934 X-His dipeptidase (M25) signature 76 95 6.2E-55 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 PRINTS PR00934 X-His dipeptidase (M25) signature 97 115 6.2E-55 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 PRINTS PR00934 X-His dipeptidase (M25) signature 155 173 6.2E-55 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 PRINTS PR00934 X-His dipeptidase (M25) signature 202 219 6.2E-55 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 PRINTS PR00934 X-His dipeptidase (M25) signature 427 443 6.2E-55 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 PRINTS PR00934 X-His dipeptidase (M25) signature 131 148 6.2E-55 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 PRINTS PR00934 X-His dipeptidase (M25) signature 449 471 6.2E-55 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 PRINTS PR00934 X-His dipeptidase (M25) signature 247 266 6.2E-55 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 SUPERFAMILY SSF53187 9 478 3.28E-52 T 15-10-2018 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 Gene3D G3DSA:3.40.630.10 377 484 4.0E-20 T 15-10-2018 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 Gene3D G3DSA:3.40.630.10 4 235 1.8E-52 T 15-10-2018 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 PIRSF PIRSF016599 1 484 1.6E-173 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 THII_3773 cdff06d5024c8c8bc370312c36f8bab2 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 4 479 5.0E-166 T 15-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 Gene3D G3DSA:3.40.50.620 242 376 6.7E-7 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 SMART SM00388 674 741 1.5E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 Pfam PF13492 GAF domain 535 655 5.6E-18 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 Pfam PF00512 His Kinase A (phospho-acceptor) domain 675 741 3.5E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 SUPERFAMILY SSF52402 253 376 6.36E-8 T 15-10-2018 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 Gene3D G3DSA:3.40.50.300 21 231 2.8E-100 T 15-10-2018 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 Gene3D G3DSA:1.10.287.130 667 742 1.3E-15 T 15-10-2018 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 SUPERFAMILY SSF52540 29 171 3.66E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 SUPERFAMILY SSF55781 516 667 2.62E-15 T 15-10-2018 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 Gene3D G3DSA:3.30.450.40 518 665 7.2E-43 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 790 894 3.3E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 SUPERFAMILY SSF47384 668 742 2.75E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 Pfam PF13493 Domain of unknown function (DUF4118) 409 513 7.0E-30 T 15-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 SMART SM00387 785 895 7.4E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 232 5.4E-98 T 15-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 822 836 6.4E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 879 892 6.4E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 850 6.4E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 855 873 6.4E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 SUPERFAMILY SSF55874 731 895 7.2E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 Gene3D G3DSA:3.30.565.10 743 897 2.0E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1571 3a7eb99725f32c4fa2b853dbb803e04c 909 Gene3D G3DSA:1.20.120.620 404 509 2.3E-34 T 15-10-2018 IPR038318 KdpD, transmembrane domain superfamily THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1321 1335 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1277 1291 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Gene3D G3DSA:2.130.10.10 1644 1717 8.2E-25 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Gene3D G3DSA:2.130.10.10 1385 1474 6.1E-37 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1447 1461 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 PRINTS PR00320 G protein beta WD-40 repeat signature 1405 1419 4.2E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 PRINTS PR00320 G protein beta WD-40 repeat signature 1698 1712 4.2E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 PRINTS PR00320 G protein beta WD-40 repeat signature 1526 1540 4.2E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1782 1796 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1189 1203 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1405 1419 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Gene3D G3DSA:3.40.50.10140 282 412 1.2E-22 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Gene3D G3DSA:3.40.50.10140 9 116 3.7E-17 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Gene3D G3DSA:3.40.50.10140 483 608 1.0E-25 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SUPERFAMILY SSF52200 480 610 6.8E-23 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1824 1838 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1363 1377 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1618 1632 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Gene3D G3DSA:2.130.10.10 1718 1861 5.4E-41 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Gene3D G3DSA:2.130.10.10 1257 1384 2.0E-38 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1231 1245 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1740 1754 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1798 1837 2.5E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1634 1669 5.8E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1337 1376 1.3E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1463 1497 0.51 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1586 1631 3.1E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1500 1539 3.6E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1421 1460 7.0E-13 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1293 1334 3.5E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1251 1290 2.2E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1672 1711 2.8E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1714 1753 6.1E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1756 1795 2.2E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1163 1202 2.5E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1545 1583 1.2E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1379 1418 2.6E-12 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00320 1205 1244 2.7E-12 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SUPERFAMILY SSF52200 6 97 1.83E-14 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1526 1540 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00255 288 433 9.6E-4 T 15-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SMART SM00255 482 613 5.4E-4 T 15-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SUPERFAMILY SSF52200 286 393 1.29E-21 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SUPERFAMILY SSF50978 1604 1843 1.26E-68 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Gene3D G3DSA:2.130.10.10 1475 1643 9.1E-45 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SUPERFAMILY SSF50998 1167 1466 1.96E-91 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1656 1670 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1799 1837 0.042 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1757 1795 4.4E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1265 1289 0.11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1385 1418 1.6E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1423 1460 2.1E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1311 1334 0.087 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1344 1376 4.3E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1673 1711 1.8E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1606 1631 0.055 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1206 1244 2.3E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1647 1669 0.025 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1549 1583 0.16 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1716 1753 4.6E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1512 1539 0.0018 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF00400 WD domain, G-beta repeat 1170 1202 1.3E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF13676 TIR domain 291 394 2.4E-21 T 15-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF13676 TIR domain 485 590 2.3E-22 T 15-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 Pfam PF13676 TIR domain 13 97 1.8E-13 T 15-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1698 1712 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1574 171d84f3b317727d8fe99f8cb3586f9f 2013 SUPERFAMILY SSF50998 1475 1641 3.06E-37 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 942 1214 1.9E-123 T 15-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 SUPERFAMILY SSF82282 9 401 1.02E-119 T 15-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 Gene3D G3DSA:3.10.196.10 911 1229 2.6E-144 T 15-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 SUPERFAMILY SSF56507 907 1231 1.18E-129 T 15-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 Gene3D G3DSA:3.20.20.330 5 340 5.1E-131 T 15-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 SMART SM01018 658 741 9.3E-44 T 15-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 SUPERFAMILY SSF52242 748 897 6.67E-44 T 15-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 SUPERFAMILY SSF47644 654 740 7.85E-28 T 15-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 SUPERFAMILY SSF51717 358 632 1.07E-91 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 TIGRFAM TIGR02082 metH: methionine synthase 14 1196 0.0 T 15-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 Pfam PF02607 B12 binding domain 660 733 3.4E-25 T 15-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 Gene3D G3DSA:3.40.50.280 748 899 5.5E-55 T 15-10-2018 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 Pfam PF00809 Pterin binding enzyme 362 600 5.8E-62 T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 PIRSF PIRSF000381 4 1201 0.0 T 15-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 Gene3D G3DSA:3.20.20.20 342 645 2.4E-132 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 Gene3D G3DSA:1.10.288.10 940 1098 2.6E-144 T 15-10-2018 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 Pfam PF02310 B12 binding domain 752 842 1.7E-16 T 15-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 Gene3D G3DSA:1.10.1240.10 650 738 1.0E-39 T 15-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3343 5884520e81c39b3eaf56726d1f72c00d 1232 Pfam PF02574 Homocysteine S-methyltransferase 19 327 4.9E-82 T 15-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 THII_3469 79792d879068266ab75d8363ab06c612 1432 SUPERFAMILY SSF55785 411 530 1.92E-12 T 15-10-2018 IPR035965 PAS domain superfamily THII_3469 79792d879068266ab75d8363ab06c612 1432 Pfam PF12729 Four helix bundle sensory module for signal transduction 11 137 3.7E-7 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain THII_3469 79792d879068266ab75d8363ab06c612 1432 Gene3D G3DSA:3.30.450.20 796 929 1.3E-20 T 15-10-2018 THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00387 1054 1185 1.9E-34 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3469 79792d879068266ab75d8363ab06c612 1432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1055 1184 3.2E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3469 79792d879068266ab75d8363ab06c612 1432 Gene3D G3DSA:3.30.565.10 1008 1184 3.8E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3469 79792d879068266ab75d8363ab06c612 1432 SUPERFAMILY SSF55874 996 1183 8.64E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3469 79792d879068266ab75d8363ab06c612 1432 Pfam PF08447 PAS fold 324 405 2.2E-14 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_3469 79792d879068266ab75d8363ab06c612 1432 Gene3D G3DSA:3.30.450.20 425 538 1.8E-12 T 15-10-2018 THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00086 873 914 1.0 T 15-10-2018 IPR001610 PAC motif THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00086 617 659 1.8E-13 T 15-10-2018 IPR001610 PAC motif THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00086 372 414 1.9E-9 T 15-10-2018 IPR001610 PAC motif THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00086 744 784 0.009 T 15-10-2018 IPR001610 PAC motif THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00086 245 287 7.2E-8 T 15-10-2018 IPR001610 PAC motif THII_3469 79792d879068266ab75d8363ab06c612 1432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1169 1182 6.0E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3469 79792d879068266ab75d8363ab06c612 1432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1111 1125 6.0E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3469 79792d879068266ab75d8363ab06c612 1432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1145 1163 6.0E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3469 79792d879068266ab75d8363ab06c612 1432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1129 1139 6.0E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00388 941 1007 8.8E-27 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3469 79792d879068266ab75d8363ab06c612 1432 Pfam PF13188 PAS domain 427 475 0.018 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 941 1007 1.3E-22 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3469 79792d879068266ab75d8363ab06c612 1432 Pfam PF00072 Response regulator receiver domain 1229 1340 1.5E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3469 79792d879068266ab75d8363ab06c612 1432 SUPERFAMILY SSF55785 810 923 2.97E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_3469 79792d879068266ab75d8363ab06c612 1432 SUPERFAMILY SSF47384 929 1008 1.04E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3469 79792d879068266ab75d8363ab06c612 1432 Gene3D G3DSA:3.30.450.20 539 657 6.4E-28 T 15-10-2018 THII_3469 79792d879068266ab75d8363ab06c612 1432 Pfam PF00989 PAS fold 676 760 3.0E-5 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_3469 79792d879068266ab75d8363ab06c612 1432 Gene3D G3DSA:1.10.287.130 930 1007 5.5E-28 T 15-10-2018 THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00091 173 239 1.4E-6 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00091 799 866 0.31 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00091 426 488 1.8 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00091 671 737 8.8E-6 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00091 544 610 5.9E-8 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00091 299 365 1.4E-12 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 Gene3D G3DSA:3.30.450.20 162 297 2.0E-32 T 15-10-2018 THII_3469 79792d879068266ab75d8363ab06c612 1432 Gene3D G3DSA:3.30.450.20 298 424 9.8E-32 T 15-10-2018 THII_3469 79792d879068266ab75d8363ab06c612 1432 Gene3D G3DSA:3.40.50.12740 1226 1406 2.9E-41 T 15-10-2018 THII_3469 79792d879068266ab75d8363ab06c612 1432 SUPERFAMILY SSF55785 655 776 7.85E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_3469 79792d879068266ab75d8363ab06c612 1432 Gene3D G3DSA:3.30.450.20 658 782 3.5E-18 T 15-10-2018 THII_3469 79792d879068266ab75d8363ab06c612 1432 Pfam PF13426 PAS domain 811 913 4.1E-10 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 Pfam PF13426 PAS domain 185 286 6.0E-14 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 Pfam PF13426 PAS domain 555 658 9.6E-15 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 SUPERFAMILY SSF55785 529 657 5.64E-31 T 15-10-2018 IPR035965 PAS domain superfamily THII_3469 79792d879068266ab75d8363ab06c612 1432 SUPERFAMILY SSF55785 178 290 8.53E-28 T 15-10-2018 IPR035965 PAS domain superfamily THII_3469 79792d879068266ab75d8363ab06c612 1432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 295 421 8.6E-33 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 540 666 6.0E-25 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 799 921 4.1E-14 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 667 791 1.1E-19 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 169 294 2.7E-25 T 15-10-2018 IPR000014 PAS domain THII_3469 79792d879068266ab75d8363ab06c612 1432 SUPERFAMILY SSF55785 284 412 1.32E-31 T 15-10-2018 IPR035965 PAS domain superfamily THII_3469 79792d879068266ab75d8363ab06c612 1432 SUPERFAMILY SSF52172 1226 1355 3.7E-37 T 15-10-2018 IPR011006 CheY-like superfamily THII_3469 79792d879068266ab75d8363ab06c612 1432 SMART SM00448 1227 1340 2.0E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2416 ceeed718a0ff45dc3d3e2c707008f6af 207 Gene3D G3DSA:3.40.50.150 1 206 2.5E-60 T 15-10-2018 THII_2416 ceeed718a0ff45dc3d3e2c707008f6af 207 SUPERFAMILY SSF53335 6 204 4.87E-34 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2416 ceeed718a0ff45dc3d3e2c707008f6af 207 PIRSF PIRSF003078 2 206 7.0E-51 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 THII_2416 ceeed718a0ff45dc3d3e2c707008f6af 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 203 25.154 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 THII_2416 ceeed718a0ff45dc3d3e2c707008f6af 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 204 3.5E-51 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 THII_2416 ceeed718a0ff45dc3d3e2c707008f6af 207 Pfam PF02527 rRNA small subunit methyltransferase G 24 201 3.8E-52 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 Pfam PF02503 Polyphosphate kinase middle domain 156 357 7.4E-65 T 15-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 41 713 8.4E-291 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 Hamap MF_00347 Polyphosphate kinase [ppk]. 38 717 28.6 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 SUPERFAMILY SSF56024 357 529 5.65E-57 T 15-10-2018 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 SUPERFAMILY SSF140356 38 142 3.14E-34 T 15-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 Pfam PF13090 Polyphosphate kinase C-terminal domain 365 712 2.0E-152 T 15-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 SUPERFAMILY SSF143724 144 349 2.55E-70 T 15-10-2018 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 SUPERFAMILY SSF56024 534 715 5.16E-69 T 15-10-2018 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 Gene3D G3DSA:3.30.1840.10 34 348 9.4E-103 T 15-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 Gene3D G3DSA:3.30.870.10 357 533 1.3E-70 T 15-10-2018 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 Gene3D G3DSA:3.30.870.10 534 719 1.1E-66 T 15-10-2018 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 Pfam PF13089 Polyphosphate kinase N-terminal domain 41 146 8.5E-32 T 15-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 THII_2967 86b0eabe14d286bafce7fa6af161e051 719 PIRSF PIRSF015589 20 719 1.2E-280 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 THII_0719 c3a8c20e3d58260cb3779273b19f5a01 261 Pfam PF08003 Protein of unknown function (DUF1698) 55 152 1.1E-5 T 15-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like THII_0719 c3a8c20e3d58260cb3779273b19f5a01 261 Gene3D G3DSA:3.40.50.150 25 189 1.3E-11 T 15-10-2018 THII_0719 c3a8c20e3d58260cb3779273b19f5a01 261 SUPERFAMILY SSF53335 14 247 1.88E-14 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0901 d1d7d161421eda7444ddb971aeb56018 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 285 9.9E-18 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THII_0901 d1d7d161421eda7444ddb971aeb56018 397 Gene3D G3DSA:2.40.50.100 52 86 1.1E-8 T 15-10-2018 THII_0901 d1d7d161421eda7444ddb971aeb56018 397 Gene3D G3DSA:1.10.287.470 167 188 2.3E-22 T 15-10-2018 THII_0901 d1d7d161421eda7444ddb971aeb56018 397 SUPERFAMILY SSF111369 155 304 2.09E-7 T 15-10-2018 THII_0901 d1d7d161421eda7444ddb971aeb56018 397 Gene3D G3DSA:1.10.287.470 87 115 1.1E-8 T 15-10-2018 THII_0901 d1d7d161421eda7444ddb971aeb56018 397 Gene3D G3DSA:2.40.30.170 42 51 1.1E-8 T 15-10-2018 THII_0901 d1d7d161421eda7444ddb971aeb56018 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 166 386 2.6E-31 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 THII_0901 d1d7d161421eda7444ddb971aeb56018 397 Gene3D G3DSA:2.40.50.100 189 225 2.3E-22 T 15-10-2018 THII_0901 d1d7d161421eda7444ddb971aeb56018 397 Gene3D G3DSA:2.40.30.170 226 301 2.3E-22 T 15-10-2018 THII_0901 d1d7d161421eda7444ddb971aeb56018 397 Gene3D G3DSA:2.40.420.20 306 387 4.2E-10 T 15-10-2018 THII_0545 2a48b05f7dee7648838089fe4dc716c9 143 Pfam PF01724 Domain of unknown function DUF29 16 110 3.3E-8 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 PRINTS PR00046 Major sigma-70 factor signature 97 110 1.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 PRINTS PR00046 Major sigma-70 factor signature 266 281 1.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 PRINTS PR00046 Major sigma-70 factor signature 281 292 1.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 PRINTS PR00046 Major sigma-70 factor signature 121 129 1.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 PRINTS PR00046 Major sigma-70 factor signature 245 257 1.5E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 Pfam PF04545 Sigma-70, region 4 241 294 2.4E-17 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 68 296 9.1E-36 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 Pfam PF04539 Sigma-70 region 3 153 226 3.2E-15 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 SUPERFAMILY SSF88946 35 143 1.2E-46 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 97 110 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 Pfam PF04542 Sigma-70 region 2 73 142 4.5E-21 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 Gene3D G3DSA:1.10.10.10 223 299 5.6E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 SUPERFAMILY SSF88659 205 300 8.04E-24 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 2 307 38.299 T 15-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 31 307 8.0E-130 T 15-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 Gene3D G3DSA:1.10.601.10 3 142 7.7E-48 T 15-10-2018 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 Pfam PF00140 Sigma-70 factor, region 1.2 35 67 2.3E-13 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 Gene3D G3DSA:1.10.10.10 146 221 2.6E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 SUPERFAMILY SSF88659 146 220 8.28E-13 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_2914 45a72e5d4cb6dfc2325ad7e4751ffbad 309 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 266 292 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_1489 68bd384b33b0d5880fe77284899e8e89 96 PRINTS PR00297 10kDa chaperonin signature 81 94 5.3E-32 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 THII_1489 68bd384b33b0d5880fe77284899e8e89 96 PRINTS PR00297 10kDa chaperonin signature 60 72 5.3E-32 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 THII_1489 68bd384b33b0d5880fe77284899e8e89 96 PRINTS PR00297 10kDa chaperonin signature 3 18 5.3E-32 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 THII_1489 68bd384b33b0d5880fe77284899e8e89 96 PRINTS PR00297 10kDa chaperonin signature 25 46 5.3E-32 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 THII_1489 68bd384b33b0d5880fe77284899e8e89 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 15-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 THII_1489 68bd384b33b0d5880fe77284899e8e89 96 SUPERFAMILY SSF50129 1 95 7.65E-36 T 15-10-2018 IPR011032 GroES-like superfamily THII_1489 68bd384b33b0d5880fe77284899e8e89 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.374 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 THII_1489 68bd384b33b0d5880fe77284899e8e89 96 SMART SM00883 2 94 4.8E-57 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 THII_1489 68bd384b33b0d5880fe77284899e8e89 96 Gene3D G3DSA:2.30.33.40 1 96 2.6E-38 T 15-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 THII_1489 68bd384b33b0d5880fe77284899e8e89 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 3.1E-35 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 THII_0259 aa1a4cecd08721d596a4764d8bb10993 363 SUPERFAMILY SSF161111 2 194 4.97E-49 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily THII_0259 aa1a4cecd08721d596a4764d8bb10993 363 Pfam PF01545 Cation efflux family 1 192 6.1E-41 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 THII_0259 aa1a4cecd08721d596a4764d8bb10993 363 Gene3D G3DSA:1.20.1510.10 1 193 2.5E-57 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily THII_0259 aa1a4cecd08721d596a4764d8bb10993 363 Pfam PF16916 Dimerisation domain of Zinc Transporter 197 275 3.8E-24 T 15-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain THII_0259 aa1a4cecd08721d596a4764d8bb10993 363 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 2 276 3.4E-66 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 THII_0259 aa1a4cecd08721d596a4764d8bb10993 363 Gene3D G3DSA:3.30.70.1350 195 275 2.5E-21 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 THII_0259 aa1a4cecd08721d596a4764d8bb10993 363 SUPERFAMILY SSF160240 197 276 3.01E-21 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 THII_2972 e75714beeff2ebb3615015fd399ddebb 78 SMART SM00387 1 76 6.8E-7 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2972 e75714beeff2ebb3615015fd399ddebb 78 Gene3D G3DSA:3.30.565.10 1 77 1.1E-27 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2972 e75714beeff2ebb3615015fd399ddebb 78 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 3 75 8.2E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2972 e75714beeff2ebb3615015fd399ddebb 78 PRINTS PR00344 Bacterial sensor protein C-terminal signature 19 29 4.1E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2972 e75714beeff2ebb3615015fd399ddebb 78 PRINTS PR00344 Bacterial sensor protein C-terminal signature 60 73 4.1E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2972 e75714beeff2ebb3615015fd399ddebb 78 PRINTS PR00344 Bacterial sensor protein C-terminal signature 36 54 4.1E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2972 e75714beeff2ebb3615015fd399ddebb 78 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1 15 4.1E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2972 e75714beeff2ebb3615015fd399ddebb 78 SUPERFAMILY SSF55874 2 74 3.14E-26 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2610 9484b8d1ab11414e7a6588b301897958 473 Gene3D G3DSA:3.40.190.10 116 213 7.9E-61 T 15-10-2018 THII_2610 9484b8d1ab11414e7a6588b301897958 473 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 304 332 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 THII_2610 9484b8d1ab11414e7a6588b301897958 473 SMART SM00062 31 258 1.6E-17 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_2610 9484b8d1ab11414e7a6588b301897958 473 Gene3D G3DSA:1.10.530.10 282 444 7.5E-32 T 15-10-2018 THII_2610 9484b8d1ab11414e7a6588b301897958 473 SUPERFAMILY SSF53850 32 257 3.11E-34 T 15-10-2018 THII_2610 9484b8d1ab11414e7a6588b301897958 473 Pfam PF01464 Transglycosylase SLT domain 288 397 2.8E-20 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 THII_2610 9484b8d1ab11414e7a6588b301897958 473 Gene3D G3DSA:3.40.190.10 25 253 7.9E-61 T 15-10-2018 THII_2610 9484b8d1ab11414e7a6588b301897958 473 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 4 463 43.266 T 15-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 THII_2610 9484b8d1ab11414e7a6588b301897958 473 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 257 2.3E-25 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_2610 9484b8d1ab11414e7a6588b301897958 473 SUPERFAMILY SSF53955 236 417 5.2E-35 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_2936 7e99dffe8405b0d07543c76713447885 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.8E-47 T 15-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2936 7e99dffe8405b0d07543c76713447885 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.681 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2936 7e99dffe8405b0d07543c76713447885 513 Gene3D G3DSA:2.40.30.20 1 93 7.5E-32 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_2936 7e99dffe8405b0d07543c76713447885 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 1.4E-13 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_2936 7e99dffe8405b0d07543c76713447885 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 6.2E-73 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_2936 7e99dffe8405b0d07543c76713447885 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_2936 7e99dffe8405b0d07543c76713447885 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 512 1.1E-252 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2936 7e99dffe8405b0d07543c76713447885 513 SUPERFAMILY SSF50615 10 94 6.02E-28 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_2936 7e99dffe8405b0d07543c76713447885 513 Gene3D G3DSA:3.40.50.300 94 382 8.5E-131 T 15-10-2018 THII_2936 7e99dffe8405b0d07543c76713447885 513 PIRSF PIRSF039088 1 513 2.1E-239 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2936 7e99dffe8405b0d07543c76713447885 513 Gene3D G3DSA:1.20.150.20 383 513 4.1E-49 T 15-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2936 7e99dffe8405b0d07543c76713447885 513 SUPERFAMILY SSF52540 96 381 1.99E-95 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2936 7e99dffe8405b0d07543c76713447885 513 SUPERFAMILY SSF47917 383 511 1.44E-47 T 15-10-2018 THII_2292 36f427ae718948e9efa1a03c2a5009d9 324 Gene3D G3DSA:3.60.120.10 26 323 1.6E-70 T 15-10-2018 IPR005801 ADC synthase GO:0009058 THII_2292 36f427ae718948e9efa1a03c2a5009d9 324 PRINTS PR00095 Anthranilate synthase component I signature 174 187 2.0E-10 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 THII_2292 36f427ae718948e9efa1a03c2a5009d9 324 PRINTS PR00095 Anthranilate synthase component I signature 258 272 2.0E-10 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 THII_2292 36f427ae718948e9efa1a03c2a5009d9 324 PRINTS PR00095 Anthranilate synthase component I signature 160 173 2.0E-10 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 THII_2292 36f427ae718948e9efa1a03c2a5009d9 324 PRINTS PR00095 Anthranilate synthase component I signature 272 286 2.0E-10 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 THII_2292 36f427ae718948e9efa1a03c2a5009d9 324 SUPERFAMILY SSF56322 30 317 1.3E-68 T 15-10-2018 IPR005801 ADC synthase GO:0009058 THII_2292 36f427ae718948e9efa1a03c2a5009d9 324 Pfam PF00425 chorismate binding enzyme 72 315 6.1E-62 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.40.50.12740 1612 1810 5.2E-38 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF55785 841 951 3.87E-28 T 15-10-2018 IPR035965 PAS domain superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF08448 PAS fold 721 822 5.4E-12 T 15-10-2018 IPR013656 PAS fold-4 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF08448 PAS fold 467 575 2.6E-10 T 15-10-2018 IPR013656 PAS fold-4 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF08448 PAS fold 1218 1326 1.1E-9 T 15-10-2018 IPR013656 PAS fold-4 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF55785 699 818 4.19E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF08447 PAS fold 363 441 5.0E-6 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF08447 PAS fold 232 309 3.7E-8 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF08447 PAS fold 977 1065 1.7E-18 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF08447 PAS fold 1106 1190 1.1E-13 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1352 1418 3.1E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.30.450.20 1206 1341 6.7E-25 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF55785 53 180 5.06E-11 T 15-10-2018 IPR035965 PAS domain superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF47384 1339 1419 9.02E-24 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1559 1572 2.0E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1535 1553 2.0E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1501 1515 2.0E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.30.450.20 828 953 8.9E-37 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF55785 318 447 2.62E-12 T 15-10-2018 IPR035965 PAS domain superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 710 827 3.9E-13 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 950 1078 3.1E-10 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 825 949 1.8E-25 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1209 1332 1.7E-12 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 581 709 1.4E-26 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 458 580 4.3E-9 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1079 1205 6.6E-23 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF55874 1407 1575 9.69E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF55785 227 322 5.41E-14 T 15-10-2018 IPR035965 PAS domain superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF00072 Response regulator receiver domain 1614 1721 2.8E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00091 461 527 2.8 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00091 954 1022 8.1E-8 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00091 204 274 12.0 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00091 63 133 0.15 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00091 585 653 2.0E-8 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00091 1083 1149 1.7E-11 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00091 828 894 3.6E-7 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00091 1210 1277 2.8E-6 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00091 330 401 46.0 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00091 714 779 8.6E-7 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF55785 446 571 1.03E-14 T 15-10-2018 IPR035965 PAS domain superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF55785 1088 1200 9.77E-25 T 15-10-2018 IPR035965 PAS domain superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.30.450.20 707 827 6.7E-21 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.30.450.20 454 583 1.6E-16 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.30.450.20 1084 1202 2.2E-27 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.30.450.20 202 319 2.2E-18 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00086 280 321 130.0 T 15-10-2018 IPR001610 PAC motif THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00086 1283 1325 0.33 T 15-10-2018 IPR001610 PAC motif THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00086 1155 1198 6.4E-6 T 15-10-2018 IPR001610 PAC motif THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00086 141 183 21.0 T 15-10-2018 IPR001610 PAC motif THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00086 900 942 7.6E-9 T 15-10-2018 IPR001610 PAC motif THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00086 1029 1071 6.5E-7 T 15-10-2018 IPR001610 PAC motif THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00086 778 820 4.7 T 15-10-2018 IPR001610 PAC motif THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00086 662 702 1.0E-5 T 15-10-2018 IPR001610 PAC motif THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF55785 939 1069 1.2E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.30.450.20 954 1020 1.2E-20 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.30.450.20 329 399 2.6E-8 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF55785 570 700 4.61E-29 T 15-10-2018 IPR035965 PAS domain superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.30.450.20 584 705 5.7E-31 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF55785 1195 1323 2.69E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:1.10.287.130 1342 1418 2.8E-29 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.30.565.10 1419 1577 2.9E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SUPERFAMILY SSF52172 1610 1729 1.57E-36 T 15-10-2018 IPR011006 CheY-like superfamily THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF13426 PAS domain 841 941 1.7E-15 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF13426 PAS domain 596 701 6.5E-15 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF13426 PAS domain 73 180 0.0027 T 15-10-2018 IPR000014 PAS domain THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:2.10.70.100 403 451 2.7E-7 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:2.10.70.100 1027 1073 1.9E-10 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00448 1611 1724 3.1E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00387 1465 1575 2.5E-34 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1466 1574 3.1E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 Gene3D G3DSA:3.30.450.20 51 188 2.1E-13 T 15-10-2018 THII_1036 e9359e8a70387fbfb35216fde34114aa 1814 SMART SM00388 1352 1418 1.3E-26 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1464 fab65b5221e2ce81103c2115ae5710b2 213 Gene3D G3DSA:3.30.310.70 66 208 1.9E-8 T 15-10-2018 IPR035923 TT1751-like domain superfamily THII_1464 fab65b5221e2ce81103c2115ae5710b2 213 SUPERFAMILY SSF103247 87 206 1.83E-20 T 15-10-2018 IPR035923 TT1751-like domain superfamily THII_1464 fab65b5221e2ce81103c2115ae5710b2 213 Pfam PF03625 Domain of unknown function DUF302 117 176 1.1E-8 T 15-10-2018 IPR005180 Domain of unknown function DUF302 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 SUPERFAMILY SSF52374 5 385 7.51E-99 T 15-10-2018 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 Pfam PF01588 Putative tRNA binding domain 579 672 3.6E-25 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 Gene3D G3DSA:3.40.50.620 8 383 1.7E-151 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 SUPERFAMILY SSF57770 142 176 1.02E-11 T 15-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 531 6.4E-177 T 15-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 SUPERFAMILY SSF50249 568 674 4.41E-33 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 563 675 1.8E-42 T 15-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 Gene3D G3DSA:2.40.50.140 564 675 1.4E-35 T 15-10-2018 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 Gene3D G3DSA:2.20.28.20 142 176 1.7E-151 T 15-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 Pfam PF09334 tRNA synthetases class I (M) 8 395 4.9E-155 T 15-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 SUPERFAMILY SSF47323 385 586 1.87E-41 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 6.6E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 290 305 6.6E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.6E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 6.6E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.6E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.6E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 Pfam PF08264 Anticodon-binding domain of tRNA 424 502 1.9E-6 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 542 39.716 T 15-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 THII_0142 8c2eed86953f8fd4245baa12e7435d89 675 Gene3D G3DSA:1.10.730.10 388 523 5.3E-30 T 15-10-2018 THII_3367 4428dd5b80587f38fe3366f7faa32707 394 Pfam PF03235 Protein of unknown function DUF262 50 225 5.7E-28 T 15-10-2018 IPR004919 Domain of unknown function DUF262 THII_1406 75472efdece6f72375945f1889820d9c 436 SMART SM00487 20 222 5.1E-57 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_1406 75472efdece6f72375945f1889820d9c 436 Pfam PF00270 DEAD/DEAH box helicase 25 196 2.0E-47 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 THII_1406 75472efdece6f72375945f1889820d9c 436 Gene3D G3DSA:3.40.50.300 214 435 4.6E-49 T 15-10-2018 THII_1406 75472efdece6f72375945f1889820d9c 436 Pfam PF00271 Helicase conserved C-terminal domain 235 340 2.2E-27 T 15-10-2018 IPR001650 Helicase, C-terminal THII_1406 75472efdece6f72375945f1889820d9c 436 Gene3D G3DSA:3.40.50.300 2 210 4.0E-75 T 15-10-2018 THII_1406 75472efdece6f72375945f1889820d9c 436 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site THII_1406 75472efdece6f72375945f1889820d9c 436 SUPERFAMILY SSF52540 75 362 4.51E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1406 75472efdece6f72375945f1889820d9c 436 SMART SM00490 259 340 3.8E-31 T 15-10-2018 IPR001650 Helicase, C-terminal THII_0167 fe33348fc5877456bf61d351408d95e5 623 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 560 578 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site THII_0167 fe33348fc5877456bf61d351408d95e5 623 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 527 544 0.025 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 THII_0167 fe33348fc5877456bf61d351408d95e5 623 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 581 598 5.0E-4 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 THII_0167 fe33348fc5877456bf61d351408d95e5 623 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 564 580 0.0018 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 THII_0167 fe33348fc5877456bf61d351408d95e5 623 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 546 562 2.3E-4 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 THII_0167 fe33348fc5877456bf61d351408d95e5 623 SUPERFAMILY SSF51120 525 616 9.55E-24 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal THII_0167 fe33348fc5877456bf61d351408d95e5 623 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 119 402 2.0E-69 T 15-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 THII_0167 fe33348fc5877456bf61d351408d95e5 623 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 345 369 1.1E-7 T 15-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 THII_0167 fe33348fc5877456bf61d351408d95e5 623 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 564 585 1.1E-7 T 15-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 THII_0167 fe33348fc5877456bf61d351408d95e5 623 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 551 569 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site THII_0167 fe33348fc5877456bf61d351408d95e5 623 SUPERFAMILY SSF55486 182 340 4.55E-13 T 15-10-2018 THII_0167 fe33348fc5877456bf61d351408d95e5 623 PRINTS PR00313 NodO calcium binding signature 564 572 3.7E-9 T 15-10-2018 THII_0167 fe33348fc5877456bf61d351408d95e5 623 PRINTS PR00313 NodO calcium binding signature 573 581 3.7E-9 T 15-10-2018 THII_0167 fe33348fc5877456bf61d351408d95e5 623 PRINTS PR00313 NodO calcium binding signature 582 591 3.7E-9 T 15-10-2018 THII_0167 fe33348fc5877456bf61d351408d95e5 623 PRINTS PR00313 NodO calcium binding signature 543 554 3.7E-9 T 15-10-2018 THII_0167 fe33348fc5877456bf61d351408d95e5 623 Gene3D G3DSA:2.150.10.10 482 569 5.3E-13 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal THII_0167 fe33348fc5877456bf61d351408d95e5 623 Gene3D G3DSA:2.150.10.10 570 622 2.2E-15 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal THII_0167 fe33348fc5877456bf61d351408d95e5 623 Pfam PF05547 Immune inhibitor A peptidase M6 130 342 1.8E-32 T 15-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 THII_0167 fe33348fc5877456bf61d351408d95e5 623 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 569 587 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site THII_1245 29e5f6f43e753dcaafbe19832923d4ff 584 Pfam PF01368 DHH family 72 217 7.0E-10 T 15-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 THII_1245 29e5f6f43e753dcaafbe19832923d4ff 584 Pfam PF02272 DHHA1 domain 340 460 2.7E-21 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 THII_1245 29e5f6f43e753dcaafbe19832923d4ff 584 Gene3D G3DSA:3.90.1640.30 47 334 8.8E-82 T 15-10-2018 THII_1245 29e5f6f43e753dcaafbe19832923d4ff 584 Gene3D G3DSA:3.10.310.30 339 464 5.2E-28 T 15-10-2018 THII_1245 29e5f6f43e753dcaafbe19832923d4ff 584 SUPERFAMILY SSF64182 46 473 3.53E-106 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily THII_1245 29e5f6f43e753dcaafbe19832923d4ff 584 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 22 576 2.8E-138 T 15-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 THII_2539 1ea8f3e1aba23e12372ceb3ffcbab8b9 304 Gene3D G3DSA:3.30.230.20 1 127 4.2E-50 T 15-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 THII_2539 1ea8f3e1aba23e12372ceb3ffcbab8b9 304 Gene3D G3DSA:3.30.1700.10 128 301 5.1E-68 T 15-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 THII_2539 1ea8f3e1aba23e12372ceb3ffcbab8b9 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 9.4E-112 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 THII_2539 1ea8f3e1aba23e12372ceb3ffcbab8b9 304 SUPERFAMILY SSF54211 133 277 6.22E-54 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_2539 1ea8f3e1aba23e12372ceb3ffcbab8b9 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 288 4.9E-125 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 THII_2539 1ea8f3e1aba23e12372ceb3ffcbab8b9 304 SUPERFAMILY SSF54211 2 124 6.9E-43 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_2539 1ea8f3e1aba23e12372ceb3ffcbab8b9 304 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 47.039 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 THII_2370 c73649b8f66901055b748068616e02d5 152 SUPERFAMILY SSF54364 1 61 1.18E-22 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 THII_2370 c73649b8f66901055b748068616e02d5 152 Gene3D G3DSA:3.10.20.80 1 58 4.6E-25 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 THII_2370 c73649b8f66901055b748068616e02d5 152 ProSitePatterns PS00938 Initiation factor 3 signature. 41 54 - T 15-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 THII_2370 c73649b8f66901055b748068616e02d5 152 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 152 24.663 T 15-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 THII_2370 c73649b8f66901055b748068616e02d5 152 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 58 6.4E-24 T 15-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 THII_2370 c73649b8f66901055b748068616e02d5 152 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 152 8.7E-64 T 15-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 THII_2370 c73649b8f66901055b748068616e02d5 152 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 66 151 1.6E-38 T 15-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 THII_2370 c73649b8f66901055b748068616e02d5 152 Gene3D G3DSA:3.30.110.10 59 152 3.3E-38 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 THII_2370 c73649b8f66901055b748068616e02d5 152 SUPERFAMILY SSF55200 67 152 1.22E-33 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 Pfam PF12770 CHAT domain 489 766 8.0E-51 T 15-10-2018 IPR024983 CHAT domain THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 SMART SM00028 153 186 61.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 SMART SM00028 72 106 330.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 SMART SM00028 314 347 39.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 SMART SM00028 274 307 20.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 SMART SM00028 113 146 60.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 SMART SM00028 33 66 11.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 Pfam PF13424 Tetratricopeptide repeat 38 96 6.2E-8 T 15-10-2018 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 Pfam PF13181 Tetratricopeptide repeat 114 144 0.17 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 Gene3D G3DSA:1.25.40.10 28 97 2.1E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 Gene3D G3DSA:1.25.40.10 252 417 5.8E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 Gene3D G3DSA:1.25.40.10 98 251 3.1E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 SUPERFAMILY SSF48452 231 340 2.47E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2871 c522d18cd28dc3f4e5a8bffc5292855f 768 SUPERFAMILY SSF48452 31 238 3.1E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2323 8b27bfb3457f9a8b56174ef6e8cd4ce3 238 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 189 207 5.2E-34 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_2323 8b27bfb3457f9a8b56174ef6e8cd4ce3 238 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 60 80 5.2E-34 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_2323 8b27bfb3457f9a8b56174ef6e8cd4ce3 238 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 212 232 5.2E-34 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_2323 8b27bfb3457f9a8b56174ef6e8cd4ce3 238 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 170 187 5.2E-34 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_2323 8b27bfb3457f9a8b56174ef6e8cd4ce3 238 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 12 26 5.2E-34 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_2323 8b27bfb3457f9a8b56174ef6e8cd4ce3 238 Gene3D G3DSA:3.40.50.150 2 232 3.2E-55 T 15-10-2018 THII_2323 8b27bfb3457f9a8b56174ef6e8cd4ce3 238 Pfam PF01555 DNA methylase 14 227 2.0E-46 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 THII_2323 8b27bfb3457f9a8b56174ef6e8cd4ce3 238 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 16 22 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 THII_2323 8b27bfb3457f9a8b56174ef6e8cd4ce3 238 SUPERFAMILY SSF53335 6 232 1.57E-52 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 7.4E-31 T 15-10-2018 THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 SUPERFAMILY SSF56784 6 222 2.07E-54 T 15-10-2018 IPR036412 HAD-like superfamily THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 223 34.858 T 15-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 193 2.3E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 3.2E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 182 195 3.2E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 3.2E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 3.2E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 106 187 3.7E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 Gene3D G3DSA:1.10.150.240 21 92 1.3E-58 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 220 7.3E-62 T 15-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 THII_3701 d0209ef763980e1fbb8a7e7ae72a8c5d 226 Gene3D G3DSA:3.40.50.1000 9 215 1.3E-58 T 15-10-2018 IPR023214 HAD superfamily THII_1854 31b1746cc53c050824628bfb7becf26a 395 Gene3D G3DSA:3.30.750.80 77 182 4.8E-34 T 15-10-2018 THII_1854 31b1746cc53c050824628bfb7becf26a 395 Gene3D G3DSA:3.40.50.150 183 394 6.4E-66 T 15-10-2018 THII_1854 31b1746cc53c050824628bfb7becf26a 395 SUPERFAMILY SSF53335 85 392 5.23E-72 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1854 31b1746cc53c050824628bfb7becf26a 395 SUPERFAMILY SSF88697 6 74 4.47E-12 T 15-10-2018 IPR015947 PUA-like superfamily THII_1854 31b1746cc53c050824628bfb7becf26a 395 Gene3D G3DSA:2.30.130.10 3 75 5.1E-19 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 THII_1854 31b1746cc53c050824628bfb7becf26a 395 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 173 351 2.8E-20 T 15-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Gene3D G3DSA:3.10.350.10 275 344 1.1E-15 T 15-10-2018 IPR036779 LysM domain superfamily THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Gene3D G3DSA:3.10.350.10 17 83 2.0E-13 T 15-10-2018 IPR036779 LysM domain superfamily THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Gene3D G3DSA:3.10.350.10 345 405 1.3E-12 T 15-10-2018 IPR036779 LysM domain superfamily THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Gene3D G3DSA:3.10.350.10 198 272 4.9E-14 T 15-10-2018 IPR036779 LysM domain superfamily THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Gene3D G3DSA:3.10.350.10 416 471 1.6E-14 T 15-10-2018 IPR036779 LysM domain superfamily THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Gene3D G3DSA:3.10.350.10 115 189 2.2E-16 T 15-10-2018 IPR036779 LysM domain superfamily THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SUPERFAMILY SSF54106 425 469 1.02E-10 T 15-10-2018 THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Pfam PF01476 LysM domain 427 469 9.0E-13 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Pfam PF01476 LysM domain 214 256 5.6E-10 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Pfam PF01476 LysM domain 358 400 5.5E-11 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Pfam PF01476 LysM domain 31 73 6.4E-11 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Pfam PF01476 LysM domain 292 334 5.8E-11 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 Pfam PF01476 LysM domain 131 173 9.9E-14 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SMART SM00257 30 74 2.1E-9 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SMART SM00257 426 470 1.8E-12 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SMART SM00257 130 174 3.5E-12 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SMART SM00257 291 335 8.8E-10 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SMART SM00257 357 401 9.6E-9 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SMART SM00257 213 257 1.8E-8 T 15-10-2018 IPR018392 LysM domain THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SUPERFAMILY SSF54106 289 334 7.32E-10 T 15-10-2018 THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SUPERFAMILY SSF54106 30 74 3.4E-10 T 15-10-2018 THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SUPERFAMILY SSF54106 212 256 1.44E-8 T 15-10-2018 THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SUPERFAMILY SSF54106 356 401 3.01E-10 T 15-10-2018 THII_2648 5b89571102255e0056fdc9e8307fd0e8 471 SUPERFAMILY SSF54106 129 173 1.02E-11 T 15-10-2018 THII_1806 f48f3638cf758c8fdc3721f903849196 295 ProSitePatterns PS00746 NifH/frxC family signature 1. 88 100 - T 15-10-2018 IPR030655 NifH/chlL conserved site THII_1806 f48f3638cf758c8fdc3721f903849196 295 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 4 274 1.2E-137 T 15-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 THII_1806 f48f3638cf758c8fdc3721f903849196 295 PRINTS PR00091 Nitrogenase component II signature 125 140 2.3E-36 T 15-10-2018 THII_1806 f48f3638cf758c8fdc3721f903849196 295 PRINTS PR00091 Nitrogenase component II signature 9 22 2.3E-36 T 15-10-2018 THII_1806 f48f3638cf758c8fdc3721f903849196 295 PRINTS PR00091 Nitrogenase component II signature 31 46 2.3E-36 T 15-10-2018 THII_1806 f48f3638cf758c8fdc3721f903849196 295 PRINTS PR00091 Nitrogenase component II signature 86 100 2.3E-36 T 15-10-2018 THII_1806 f48f3638cf758c8fdc3721f903849196 295 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 4 278 2.1E-143 T 15-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 THII_1806 f48f3638cf758c8fdc3721f903849196 295 ProSitePatterns PS00692 NifH/frxC family signature 2. 126 139 - T 15-10-2018 IPR030655 NifH/chlL conserved site THII_1806 f48f3638cf758c8fdc3721f903849196 295 Gene3D G3DSA:3.40.50.300 2 277 1.3E-72 T 15-10-2018 THII_1806 f48f3638cf758c8fdc3721f903849196 295 SUPERFAMILY SSF52540 7 275 7.78E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1806 f48f3638cf758c8fdc3721f903849196 295 PIRSF PIRSF000363 2 278 8.1E-124 T 15-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 THII_1806 f48f3638cf758c8fdc3721f903849196 295 Hamap MF_00533 Nitrogenase iron protein [nifH]. 3 276 52.221 T 15-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF75011 379 697 5.56E-35 T 15-10-2018 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF141072 2182 2297 3.01E-23 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.130.10.10 371 533 5.9E-24 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF10282 Lactonase, 7-bladed beta-propeller 282 422 1.2E-10 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF10282 Lactonase, 7-bladed beta-propeller 668 798 3.4E-9 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF10282 Lactonase, 7-bladed beta-propeller 443 585 6.4E-14 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF10282 Lactonase, 7-bladed beta-propeller 170 259 5.0E-8 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF10282 Lactonase, 7-bladed beta-propeller 45 151 2.7E-10 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF141072 2437 2548 9.29E-22 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF49313 930 1018 3.53E-8 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.60.40.2030 2064 2176 1.9E-28 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.60.40.2030 2182 2296 9.2E-23 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.60.40.10 1588 1717 1.3E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.60.40.2030 1821 1942 1.2E-20 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF01650 Peptidase C13 family 1293 1438 6.9E-6 T 15-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.130.10.10 547 704 5.3E-22 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.130.10.10 208 370 2.9E-20 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.130.10.10 43 207 1.7E-25 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF05345 Putative Ig domain 1051 1088 4.8E-6 T 15-10-2018 IPR008009 Putative Ig THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.60.40.10 1017 1104 1.9E-17 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.60.40.10 926 1016 6.4E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF75011 660 814 6.93E-19 T 15-10-2018 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF141072 2311 2426 5.75E-29 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF141072 2062 2178 7.98E-30 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF141072 1944 2058 2.22E-24 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF03160 Calx-beta domain 2049 2151 7.5E-17 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF03160 Calx-beta domain 2301 2401 2.8E-12 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF03160 Calx-beta domain 1940 2033 1.9E-12 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF03160 Calx-beta domain 2559 2645 2.5E-8 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF03160 Calx-beta domain 2170 2273 1.4E-12 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF03160 Calx-beta domain 2435 2521 4.8E-11 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Pfam PF03160 Calx-beta domain 1820 1911 6.7E-9 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.60.40.2030 2305 2435 2.9E-26 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SMART SM00237 1928 2034 9.3E-13 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SMART SM00237 2168 2274 3.6E-15 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SMART SM00237 2048 2154 1.4E-20 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SMART SM00237 2300 2402 4.3E-19 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SMART SM00237 2538 2646 4.4E-14 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SMART SM00237 2416 2524 4.1E-6 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SMART SM00237 1807 1912 2.5E-8 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.60.40.2030 2558 2668 2.2E-19 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.60.40.2030 1943 2057 6.8E-23 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.60.40.2030 2436 2547 1.6E-21 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF141072 2559 2668 1.01E-17 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF50969 53 362 6.36E-30 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF141072 1821 1936 1.83E-20 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 Gene3D G3DSA:2.130.10.10 705 827 2.3E-11 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2126 a6fecda1c055b9fa01871a6b7754f848 2845 SUPERFAMILY SSF49313 1020 1105 8.0E-10 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_0612 c7808a823dc5dda65eb324f307b6f3a6 355 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 42 108 1.8E-10 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_0612 c7808a823dc5dda65eb324f307b6f3a6 355 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 233 244 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0612 c7808a823dc5dda65eb324f307b6f3a6 355 SUPERFAMILY SSF56014 117 341 1.57E-32 T 15-10-2018 THII_0612 c7808a823dc5dda65eb324f307b6f3a6 355 Gene3D G3DSA:3.30.70.3340 3 120 4.2E-46 T 15-10-2018 THII_0612 c7808a823dc5dda65eb324f307b6f3a6 355 TIGRFAM TIGR02066 dsrB: sulfite reductase, dissimilatory-type beta subunit 22 355 1.1E-161 T 15-10-2018 IPR011808 Sulphite reductase, dissimilatory-type beta subunit GO:0006790|GO:0009055|GO:0018551|GO:0051539 KEGG: 00633+1.8.99.5|KEGG: 00920+1.8.99.5|MetaCyc: PWY-5306|MetaCyc: PWY-5360 THII_0612 c7808a823dc5dda65eb324f307b6f3a6 355 SUPERFAMILY SSF55124 5 123 1.24E-43 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_0612 c7808a823dc5dda65eb324f307b6f3a6 355 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 118 334 1.7E-23 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_0612 c7808a823dc5dda65eb324f307b6f3a6 355 Gene3D G3DSA:3.30.413.10 123 341 4.9E-90 T 15-10-2018 THII_0612 c7808a823dc5dda65eb324f307b6f3a6 355 Gene3D G3DSA:3.30.70.20 188 248 4.9E-90 T 15-10-2018 THII_0612 c7808a823dc5dda65eb324f307b6f3a6 355 SUPERFAMILY SSF54862 164 245 2.51E-8 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 SUPERFAMILY SSF52777 12 188 7.11E-39 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Gene3D G3DSA:3.30.300.30 868 955 2.4E-15 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Gene3D G3DSA:3.30.300.30 1318 1389 5.5E-14 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 492 897 4.3E-132 T 15-10-2018 IPR010071 Amino acid adenylation domain THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Gene3D G3DSA:3.40.50.150 970 1149 1.0E-27 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 SUPERFAMILY SSF47336 1394 1467 6.94E-22 T 15-10-2018 IPR036736 ACP-like superfamily THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 SUPERFAMILY SSF52777 1492 1668 7.89E-39 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 SMART SM00823 Phosphopantetheine attachment site 1402 1471 7.1E-8 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Gene3D G3DSA:3.30.559.10 1492 1873 1.7E-73 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Pfam PF00501 AMP-binding enzyme 471 874 3.8E-104 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 SUPERFAMILY SSF53335 974 1112 1.31E-20 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 SUPERFAMILY SSF56801 431 1410 2.88E-149 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Gene3D G3DSA:3.30.559.30 1674 1922 1.7E-73 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Gene3D G3DSA:1.10.1200.10 1391 1469 1.1E-27 T 15-10-2018 IPR036736 ACP-like superfamily THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1426 1441 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 SUPERFAMILY SSF52777 1677 1922 1.03E-21 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Pfam PF00668 Condensation domain 7 451 2.5E-74 T 15-10-2018 IPR001242 Condensation domain THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Pfam PF00668 Condensation domain 1489 1923 2.1E-50 T 15-10-2018 IPR001242 Condensation domain THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 ProSitePatterns PS00455 Putative AMP-binding domain signature. 620 631 - T 15-10-2018 IPR020845 AMP-binding, conserved site THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Gene3D G3DSA:3.30.559.30 226 444 6.2E-33 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 SUPERFAMILY SSF52777 194 435 6.78E-40 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Pfam PF00550 Phosphopantetheine attachment site 1405 1465 2.9E-17 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Gene3D G3DSA:3.40.50.12780 456 867 8.8E-143 T 15-10-2018 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Gene3D G3DSA:3.30.559.10 12 211 1.9E-49 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 THII_2783 45a1a2a60ef325af7ac3f0adcbdff156 1925 Pfam PF08242 Methyltransferase domain 998 1097 1.7E-13 T 15-10-2018 IPR013217 Methyltransferase type 12 THII_3492 84cff79454765deba09e1b0e6a5f4de7 293 SUPERFAMILY SSF103481 44 133 3.92E-6 T 15-10-2018 THII_3492 84cff79454765deba09e1b0e6a5f4de7 293 Pfam PF00892 EamA-like transporter family 152 289 7.9E-7 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 THII_3492 84cff79454765deba09e1b0e6a5f4de7 293 Pfam PF00892 EamA-like transporter family 3 135 7.0E-10 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF55785 272 401 7.5E-18 T 15-10-2018 IPR035965 PAS domain superfamily THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:1.10.287.130 1084 1171 3.8E-28 T 15-10-2018 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:3.30.450.20 273 416 1.5E-22 T 15-10-2018 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:3.40.50.2300 1501 1624 1.5E-43 T 15-10-2018 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:2.10.70.100 754 801 1.3E-16 T 15-10-2018 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:3.40.50.2300 1346 1485 7.8E-15 T 15-10-2018 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF55785 982 1086 3.66E-14 T 15-10-2018 IPR035965 PAS domain superfamily THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00073 1686 1780 2.5E-7 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF55785 400 539 3.77E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:3.30.450.20 985 1083 2.4E-14 T 15-10-2018 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF55785 693 801 1.13E-23 T 15-10-2018 IPR035965 PAS domain superfamily THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF00989 PAS fold 995 1041 5.0E-7 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00086 757 799 2.6E-11 T 15-10-2018 IPR001610 PAC motif THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00086 499 542 0.053 T 15-10-2018 IPR001610 PAC motif THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00086 1048 1088 54.0 T 15-10-2018 IPR001610 PAC motif THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00086 361 403 3.6E-5 T 15-10-2018 IPR001610 PAC motif THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:3.30.450.40 804 984 6.3E-16 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF01627 Hpt domain 1698 1776 7.2E-15 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1296 1314 4.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1280 1290 4.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1320 1333 4.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1262 1276 4.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:3.30.565.10 1175 1339 1.0E-52 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF52172 1502 1624 2.85E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF55874 1162 1334 6.16E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:3.30.450.20 548 681 5.4E-8 T 15-10-2018 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00065 801 990 9.9E-8 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF55785 145 237 6.42E-15 T 15-10-2018 IPR035965 PAS domain superfamily THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:3.30.450.20 155 243 9.4E-15 T 15-10-2018 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF52172 1357 1482 9.39E-14 T 15-10-2018 IPR011006 CheY-like superfamily THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00388 1108 1173 3.0E-22 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00387 1221 1336 1.7E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:3.30.450.20 682 749 1.4E-14 T 15-10-2018 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00091 141 207 4.3E-6 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00091 286 357 5.8E-4 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00091 682 750 2.7E-5 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00091 994 1060 2.2E-7 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00091 415 481 2.8E-11 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00091 554 619 5.5 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00448 1360 1477 5.8E-7 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SMART SM00448 1503 1619 2.2E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 235 3.6E-8 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 283 410 6.4E-15 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 692 806 4.0E-13 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 412 548 1.5E-15 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 990 1026 3.4E-8 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF47226 1602 1776 1.09E-23 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF47384 1094 1174 2.16E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF00072 Response regulator receiver domain 1362 1475 2.4E-9 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF00072 Response regulator receiver domain 1505 1619 2.4E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1221 1336 1.7E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1109 1173 3.3E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF55785 539 668 7.42E-7 T 15-10-2018 IPR035965 PAS domain superfamily THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF08447 PAS fold 438 533 2.3E-9 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF08447 PAS fold 705 793 8.4E-22 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:1.20.120.160 1668 1781 4.4E-26 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Gene3D G3DSA:3.30.450.20 417 544 2.0E-23 T 15-10-2018 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF13426 PAS domain 155 236 2.2E-7 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF13426 PAS domain 571 669 0.043 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF13426 PAS domain 299 402 2.8E-10 T 15-10-2018 IPR000014 PAS domain THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 SUPERFAMILY SSF55781 814 984 1.84E-17 T 15-10-2018 THII_0636 fbd5bcd614a106ec365b339c755c378f 1784 Pfam PF01590 GAF domain 923 976 5.3E-5 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_0969 38d425d951cc64c021b6d69440ca071a 632 Pfam PF01841 Transglutaminase-like superfamily 348 459 2.8E-19 T 15-10-2018 IPR002931 Transglutaminase-like THII_0969 38d425d951cc64c021b6d69440ca071a 632 SMART SM00460 392 462 4.3E-16 T 15-10-2018 IPR002931 Transglutaminase-like THII_0969 38d425d951cc64c021b6d69440ca071a 632 Gene3D G3DSA:3.10.620.30 319 471 1.0E-19 T 15-10-2018 THII_0969 38d425d951cc64c021b6d69440ca071a 632 SUPERFAMILY SSF54001 303 501 3.08E-29 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily THII_3052 d6b474227f22afc317cb35c6886f83c8 475 SUPERFAMILY SSF56784 10 163 2.0E-11 T 15-10-2018 IPR036412 HAD-like superfamily THII_3052 d6b474227f22afc317cb35c6886f83c8 475 Pfam PF01040 UbiA prenyltransferase family 213 442 9.2E-23 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 THII_3052 d6b474227f22afc317cb35c6886f83c8 475 Gene3D G3DSA:1.10.357.140 195 346 2.9E-11 T 15-10-2018 THII_3052 d6b474227f22afc317cb35c6886f83c8 475 Gene3D G3DSA:3.40.50.1000 10 176 1.7E-11 T 15-10-2018 IPR023214 HAD superfamily THII_3094 7760486e8f9e637177f17f020a3e60f9 469 SUPERFAMILY SSF46689 419 463 5.08E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 SMART SM00448 5 122 5.4E-16 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 SMART SM00382 165 308 3.4E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3094 7760486e8f9e637177f17f020a3e60f9 469 SUPERFAMILY SSF52540 144 386 2.34E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3094 7760486e8f9e637177f17f020a3e60f9 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site THII_3094 7760486e8f9e637177f17f020a3e60f9 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 3.0E-9 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 3.0E-9 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 Gene3D G3DSA:1.10.8.60 317 391 8.0E-10 T 15-10-2018 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 Gene3D G3DSA:1.10.10.60 422 464 4.7E-15 T 15-10-2018 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 Pfam PF02954 Bacterial regulatory protein, Fis family 426 463 4.0E-13 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 Pfam PF00072 Response regulator receiver domain 8 122 2.2E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 Gene3D G3DSA:3.40.50.300 145 316 6.4E-58 T 15-10-2018 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 Pfam PF00158 Sigma-54 interaction domain 145 312 3.4E-63 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 Gene3D G3DSA:3.40.50.2300 4 144 8.4E-19 T 15-10-2018 THII_3094 7760486e8f9e637177f17f020a3e60f9 469 SUPERFAMILY SSF52172 6 189 5.12E-27 T 15-10-2018 IPR011006 CheY-like superfamily THII_0438 be1eb547b0e526251661ae7571e7a455 214 Pfam PF01936 NYN domain 10 131 2.9E-7 T 15-10-2018 IPR021139 NYN domain, limkain-b1-type THII_3356 512c60a02d0b28220e8dab5f142e065b 82 SMART SM00966 6 49 1.0E-4 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 THII_3356 512c60a02d0b28220e8dab5f142e065b 82 Gene3D G3DSA:2.10.260.10 1 79 2.8E-10 T 15-10-2018 THII_3356 512c60a02d0b28220e8dab5f142e065b 82 SUPERFAMILY SSF89447 1 58 1.08E-11 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 253 362 5.7E-14 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 626 694 2.3E-7 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 498 603 5.2E-9 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 120 247 7.2E-11 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Gene3D G3DSA:3.30.450.20 12 105 1.8E-10 T 15-10-2018 THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Pfam PF00989 PAS fold 257 313 4.4E-9 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SMART SM00091 123 191 1.3E-7 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SMART SM00091 383 449 0.33 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SMART SM00091 1 66 9.7 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SMART SM00091 622 688 1.6E-6 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SMART SM00091 255 321 3.7E-12 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SMART SM00091 501 566 0.025 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SUPERFAMILY SSF55785 631 729 2.37E-14 T 15-10-2018 IPR035965 PAS domain superfamily THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Pfam PF00990 Diguanylate cyclase, GGDEF domain 739 895 1.1E-33 T 15-10-2018 IPR000160 GGDEF domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SUPERFAMILY SSF55785 239 358 1.35E-19 T 15-10-2018 IPR035965 PAS domain superfamily THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SUPERFAMILY SSF55785 7 96 2.79E-10 T 15-10-2018 IPR035965 PAS domain superfamily THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Pfam PF13426 PAS domain 519 604 0.0037 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Pfam PF13426 PAS domain 135 242 8.2E-8 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Pfam PF13426 PAS domain 633 727 7.5E-10 T 15-10-2018 IPR000014 PAS domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Gene3D G3DSA:3.30.70.270 741 904 3.3E-37 T 15-10-2018 THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Gene3D G3DSA:3.30.450.20 612 731 3.0E-17 T 15-10-2018 THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Gene3D G3DSA:3.30.450.20 503 608 1.0E-11 T 15-10-2018 THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Gene3D G3DSA:3.30.450.20 377 502 4.9E-10 T 15-10-2018 THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SUPERFAMILY SSF55073 744 901 5.89E-33 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SMART SM00267 728 900 8.7E-32 T 15-10-2018 IPR000160 GGDEF domain THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Gene3D G3DSA:3.30.450.20 110 240 5.8E-15 T 15-10-2018 THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 Gene3D G3DSA:3.30.450.20 242 364 1.1E-16 T 15-10-2018 THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SUPERFAMILY SSF55785 111 241 2.09E-15 T 15-10-2018 IPR035965 PAS domain superfamily THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SUPERFAMILY SSF55785 486 602 1.68E-11 T 15-10-2018 IPR035965 PAS domain superfamily THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 SUPERFAMILY SSF55785 378 487 2.93E-5 T 15-10-2018 IPR035965 PAS domain superfamily THII_1189 30de2a66fac0ed0aafff84e0f89b748e 904 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 737 896 1.1E-29 T 15-10-2018 IPR000160 GGDEF domain THII_3379 4660c4c227a2812b05f6d655888e238d 258 SMART SM00342 170 253 2.3E-31 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 THII_3379 4660c4c227a2812b05f6d655888e238d 258 SUPERFAMILY SSF46689 155 204 4.12E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3379 4660c4c227a2812b05f6d655888e238d 258 SUPERFAMILY SSF46689 207 256 2.24E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3379 4660c4c227a2812b05f6d655888e238d 258 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 237 6.7E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 THII_3379 4660c4c227a2812b05f6d655888e238d 258 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 253 6.7E-7 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 THII_3379 4660c4c227a2812b05f6d655888e238d 258 Gene3D G3DSA:1.10.10.60 154 203 3.0E-11 T 15-10-2018 THII_3379 4660c4c227a2812b05f6d655888e238d 258 Pfam PF12833 Helix-turn-helix domain 176 254 3.3E-24 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 THII_3379 4660c4c227a2812b05f6d655888e238d 258 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 249 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 THII_3379 4660c4c227a2812b05f6d655888e238d 258 Gene3D G3DSA:1.10.10.60 204 256 2.0E-18 T 15-10-2018 THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 SMART SM00304 375 427 2.2E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 Pfam PF08448 PAS fold 447 563 1.4E-6 T 15-10-2018 IPR013656 PAS fold-4 THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 SUPERFAMILY SSF55785 427 559 7.85E-13 T 15-10-2018 IPR035965 PAS domain superfamily THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 SUPERFAMILY SSF158472 375 424 8.5E-11 T 15-10-2018 THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 Gene3D G3DSA:1.20.1480.50 346 430 3.0E-17 T 15-10-2018 THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 440 566 2.7E-8 T 15-10-2018 IPR000014 PAS domain THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 Gene3D G3DSA:3.30.450.20 431 566 2.4E-16 T 15-10-2018 THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 SUPERFAMILY SSF55073 616 774 8.37E-46 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 607 774 1.1E-50 T 15-10-2018 IPR000160 GGDEF domain THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 Gene3D G3DSA:3.30.70.270 597 774 7.4E-57 T 15-10-2018 THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 SMART SM00267 600 775 2.2E-66 T 15-10-2018 IPR000160 GGDEF domain THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 Pfam PF02743 Cache domain 65 338 6.5E-23 T 15-10-2018 IPR033479 Double Cache domain 1 THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 Gene3D G3DSA:3.30.450.20 226 344 1.4E-22 T 15-10-2018 THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 Pfam PF00990 Diguanylate cyclase, GGDEF domain 611 771 8.9E-48 T 15-10-2018 IPR000160 GGDEF domain THII_1776 9e0a9a6e9d9d87f21de5bade5955d6ae 777 Gene3D G3DSA:3.30.450.20 165 225 1.4E-22 T 15-10-2018 THII_2056 8b4b0877fca502d6c58527ca61306510 652 Gene3D G3DSA:1.25.20.10 34 392 1.7E-107 T 15-10-2018 THII_2056 8b4b0877fca502d6c58527ca61306510 652 Gene3D G3DSA:1.10.530.10 479 642 1.4E-45 T 15-10-2018 THII_2056 8b4b0877fca502d6c58527ca61306510 652 SUPERFAMILY SSF53955 447 631 1.16E-43 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_2056 8b4b0877fca502d6c58527ca61306510 652 Gene3D G3DSA:1.10.1240.20 409 476 6.0E-6 T 15-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 THII_2056 8b4b0877fca502d6c58527ca61306510 652 Pfam PF01464 Transglycosylase SLT domain 493 599 6.9E-30 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 THII_2056 8b4b0877fca502d6c58527ca61306510 652 SUPERFAMILY SSF48435 34 483 2.62E-118 T 15-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 THII_2056 8b4b0877fca502d6c58527ca61306510 652 Pfam PF14718 Soluble lytic murein transglycosylase L domain 412 478 2.5E-16 T 15-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 THII_2389 ab846bf0e3f99c01b1665533fb55d162 315 Pfam PF01715 IPP transferase 43 288 3.0E-79 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 THII_2389 ab846bf0e3f99c01b1665533fb55d162 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 298 1.7E-97 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 THII_2389 ab846bf0e3f99c01b1665533fb55d162 315 Gene3D G3DSA:1.10.20.140 116 187 2.5E-94 T 15-10-2018 THII_2389 ab846bf0e3f99c01b1665533fb55d162 315 SUPERFAMILY SSF52540 10 154 1.24E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2389 ab846bf0e3f99c01b1665533fb55d162 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 310 29.083 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 THII_2389 ab846bf0e3f99c01b1665533fb55d162 315 SUPERFAMILY SSF52540 5 310 4.02E-9 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2389 ab846bf0e3f99c01b1665533fb55d162 315 Gene3D G3DSA:3.40.50.300 13 294 2.5E-94 T 15-10-2018 THII_2520 463937c0b8196260abfb6d2251d6aee6 495 SUPERFAMILY SSF160246 11 75 6.15E-15 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily THII_2520 463937c0b8196260abfb6d2251d6aee6 495 SUPERFAMILY SSF52540 107 492 9.81E-96 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2520 463937c0b8196260abfb6d2251d6aee6 495 Gene3D G3DSA:3.40.50.300 223 495 5.1E-110 T 15-10-2018 THII_2520 463937c0b8196260abfb6d2251d6aee6 495 Gene3D G3DSA:3.30.450.90 90 222 7.6E-53 T 15-10-2018 THII_2520 463937c0b8196260abfb6d2251d6aee6 495 Pfam PF00437 Type II/IV secretion system protein 124 388 3.4E-88 T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_2520 463937c0b8196260abfb6d2251d6aee6 495 SMART SM00382 250 373 9.9E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2520 463937c0b8196260abfb6d2251d6aee6 495 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 492 1.9E-204 T 15-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 THII_2520 463937c0b8196260abfb6d2251d6aee6 495 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 317 331 - T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_2520 463937c0b8196260abfb6d2251d6aee6 495 Gene3D G3DSA:3.30.300.160 2 89 4.9E-10 T 15-10-2018 THII_2138 e3905e3c23f8c046c2bd9ef4a51aa009 414 Gene3D G3DSA:2.40.10.10 308 403 1.5E-7 T 15-10-2018 THII_2138 e3905e3c23f8c046c2bd9ef4a51aa009 414 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 226 231 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 THII_2138 e3905e3c23f8c046c2bd9ef4a51aa009 414 SUPERFAMILY SSF50494 191 390 3.5E-17 T 15-10-2018 IPR009003 Peptidase S1, PA clan THII_2138 e3905e3c23f8c046c2bd9ef4a51aa009 414 Gene3D G3DSA:2.40.10.10 191 305 1.7E-14 T 15-10-2018 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 SUPERFAMILY SSF82714 193 273 9.94E-14 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 PRINTS PR00702 Acriflavin resistance protein family signature 409 433 3.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 PRINTS PR00702 Acriflavin resistance protein family signature 49 67 3.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 PRINTS PR00702 Acriflavin resistance protein family signature 581 598 3.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 PRINTS PR00702 Acriflavin resistance protein family signature 493 516 3.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 PRINTS PR00702 Acriflavin resistance protein family signature 355 378 3.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 PRINTS PR00702 Acriflavin resistance protein family signature 21 45 3.1E-27 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 SUPERFAMILY SSF82693 594 708 6.1E-12 T 15-10-2018 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 Gene3D G3DSA:3.30.70.1430 596 704 3.1E-219 T 15-10-2018 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 Gene3D G3DSA:3.30.70.1430 51 854 3.1E-219 T 15-10-2018 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 Gene3D G3DSA:3.30.2090.10 188 279 3.1E-219 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 SUPERFAMILY SSF82866 900 1075 1.7E-38 T 15-10-2018 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 Pfam PF00873 AcrB/AcrD/AcrF family 18 1074 3.5E-147 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 SUPERFAMILY SSF82866 319 519 2.62E-32 T 15-10-2018 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 Gene3D G3DSA:3.30.70.1320 145 351 3.1E-219 T 15-10-2018 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 Gene3D G3DSA:3.30.70.1440 705 923 3.1E-219 T 15-10-2018 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 Gene3D G3DSA:3.30.2090.10 756 846 3.1E-219 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 SUPERFAMILY SSF82693 145 347 7.32E-11 T 15-10-2018 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 Gene3D G3DSA:1.20.1640.10 24 528 3.1E-219 T 15-10-2018 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 SUPERFAMILY SSF82714 758 843 4.32E-10 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 Gene3D G3DSA:1.20.1640.10 529 1074 3.1E-219 T 15-10-2018 THII_1483 ae2bd23e2c190427f6a0d85b05664c27 1079 SUPERFAMILY SSF82693 51 145 2.35E-15 T 15-10-2018 THII_2931 e2b094b8121d35894da7830d2d04b857 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 84 2.7E-27 T 15-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2931 e2b094b8121d35894da7830d2d04b857 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 7.0E-23 T 15-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2931 e2b094b8121d35894da7830d2d04b857 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 4.5E-39 T 15-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2931 e2b094b8121d35894da7830d2d04b857 140 SUPERFAMILY SSF46604 88 137 1.96E-13 T 15-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2931 e2b094b8121d35894da7830d2d04b857 140 Gene3D G3DSA:1.20.5.440 91 133 4.7E-15 T 15-10-2018 THII_2931 e2b094b8121d35894da7830d2d04b857 140 Gene3D G3DSA:2.60.15.10 3 90 5.1E-28 T 15-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2931 e2b094b8121d35894da7830d2d04b857 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 1.7E-12 T 15-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain THII_2931 e2b094b8121d35894da7830d2d04b857 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.049 T 15-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2931 e2b094b8121d35894da7830d2d04b857 140 SUPERFAMILY SSF51344 3 86 1.83E-22 T 15-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_0511 c41085785c445b5c8d5b584491d32661 1394 SUPERFAMILY SSF141072 368 478 4.84E-21 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0511 c41085785c445b5c8d5b584491d32661 1394 SUPERFAMILY SSF141072 491 600 1.7E-26 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0511 c41085785c445b5c8d5b584491d32661 1394 Gene3D G3DSA:2.60.40.2030 369 479 1.0E-22 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0511 c41085785c445b5c8d5b584491d32661 1394 Gene3D G3DSA:2.60.40.2030 603 720 1.3E-27 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0511 c41085785c445b5c8d5b584491d32661 1394 Pfam PF03160 Calx-beta domain 836 939 5.8E-10 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0511 c41085785c445b5c8d5b584491d32661 1394 Pfam PF03160 Calx-beta domain 370 457 2.6E-12 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0511 c41085785c445b5c8d5b584491d32661 1394 Pfam PF03160 Calx-beta domain 613 700 8.6E-16 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0511 c41085785c445b5c8d5b584491d32661 1394 Pfam PF03160 Calx-beta domain 730 821 5.6E-16 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0511 c41085785c445b5c8d5b584491d32661 1394 Pfam PF03160 Calx-beta domain 491 579 4.6E-15 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0511 c41085785c445b5c8d5b584491d32661 1394 SUPERFAMILY SSF141072 611 721 1.57E-29 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0511 c41085785c445b5c8d5b584491d32661 1394 SMART SM00237 835 940 2.4E-7 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0511 c41085785c445b5c8d5b584491d32661 1394 SMART SM00237 472 579 6.6E-12 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0511 c41085785c445b5c8d5b584491d32661 1394 SMART SM00237 593 700 6.2E-14 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0511 c41085785c445b5c8d5b584491d32661 1394 SMART SM00237 714 821 1.0E-24 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0511 c41085785c445b5c8d5b584491d32661 1394 SMART SM00237 361 458 7.6E-8 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0511 c41085785c445b5c8d5b584491d32661 1394 SUPERFAMILY SSF141072 844 964 8.76E-20 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0511 c41085785c445b5c8d5b584491d32661 1394 SUPERFAMILY SSF141072 733 844 2.75E-31 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0511 c41085785c445b5c8d5b584491d32661 1394 Gene3D G3DSA:2.60.40.2030 733 844 1.9E-29 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0511 c41085785c445b5c8d5b584491d32661 1394 Gene3D G3DSA:2.60.40.2030 490 600 1.0E-27 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0511 c41085785c445b5c8d5b584491d32661 1394 Gene3D G3DSA:2.60.40.2030 845 963 2.2E-14 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_3655 f22632ce3da381bece41567a808d72c9 396 Gene3D G3DSA:1.20.1530.20 5 377 1.1E-50 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily THII_3655 f22632ce3da381bece41567a808d72c9 396 Pfam PF00999 Sodium/hydrogen exchanger family 10 365 6.2E-39 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 THII_3581 72279015ff28c5c0fb7b8dd1b2dd1ff9 368 Gene3D G3DSA:2.60.40.10 278 366 2.3E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3581 72279015ff28c5c0fb7b8dd1b2dd1ff9 368 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 216 228 3.9E-13 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 THII_3581 72279015ff28c5c0fb7b8dd1b2dd1ff9 368 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 57 72 3.9E-13 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 THII_3581 72279015ff28c5c0fb7b8dd1b2dd1ff9 368 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 123 137 3.9E-13 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 THII_3581 72279015ff28c5c0fb7b8dd1b2dd1ff9 368 SUPERFAMILY SSF50494 12 270 5.79E-72 T 15-10-2018 IPR009003 Peptidase S1, PA clan THII_3581 72279015ff28c5c0fb7b8dd1b2dd1ff9 368 SMART SM00020 24 266 1.7E-75 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 THII_3581 72279015ff28c5c0fb7b8dd1b2dd1ff9 368 Pfam PF00089 Trypsin 25 264 3.0E-56 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 THII_3581 72279015ff28c5c0fb7b8dd1b2dd1ff9 368 Gene3D G3DSA:2.40.10.10 16 271 6.9E-69 T 15-10-2018 THII_3581 72279015ff28c5c0fb7b8dd1b2dd1ff9 368 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 217 228 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site THII_0280 36b29715b4df23989f98b679d8b899f4 264 Gene3D G3DSA:3.90.1570.10 30 148 7.0E-7 T 15-10-2018 THII_0280 36b29715b4df23989f98b679d8b899f4 264 SUPERFAMILY SSF52980 32 165 5.36E-13 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0280 36b29715b4df23989f98b679d8b899f4 264 Pfam PF05685 Putative restriction endonuclease 33 179 1.7E-20 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2747 cba4349013f14c277ab8be71b0225634 1160 SUPERFAMILY SSF141259 485 562 1.2E-22 T 15-10-2018 IPR036101 CarD-like/TRCF domain superfamily THII_2747 cba4349013f14c277ab8be71b0225634 1160 Gene3D G3DSA:3.40.50.11140 359 454 1.9E-19 T 15-10-2018 THII_2747 cba4349013f14c277ab8be71b0225634 1160 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 154 1095 0.0 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 THII_2747 cba4349013f14c277ab8be71b0225634 1160 SMART SM01058 493 590 1.1E-46 T 15-10-2018 IPR003711 CarD-like/TRCF domain THII_2747 cba4349013f14c277ab8be71b0225634 1160 SUPERFAMILY SSF52540 796 1004 3.99E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2747 cba4349013f14c277ab8be71b0225634 1160 SMART SM00487 614 804 2.0E-32 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_2747 cba4349013f14c277ab8be71b0225634 1160 Pfam PF03461 TRCF domain 1024 1114 3.1E-23 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 THII_2747 cba4349013f14c277ab8be71b0225634 1160 Gene3D G3DSA:3.90.1150.50 1019 1160 1.7E-39 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain THII_2747 cba4349013f14c277ab8be71b0225634 1160 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1120 27.213 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 THII_2747 cba4349013f14c277ab8be71b0225634 1160 SUPERFAMILY SSF52540 355 478 1.38E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2747 cba4349013f14c277ab8be71b0225634 1160 Pfam PF02559 CarD-like/TRCF domain 494 589 2.0E-24 T 15-10-2018 IPR003711 CarD-like/TRCF domain THII_2747 cba4349013f14c277ab8be71b0225634 1160 SUPERFAMILY SSF52540 17 347 3.72E-92 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2747 cba4349013f14c277ab8be71b0225634 1160 Pfam PF00270 DEAD/DEAH box helicase 619 776 2.3E-20 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 THII_2747 cba4349013f14c277ab8be71b0225634 1160 Gene3D G3DSA:3.40.50.300 492 1004 1.4E-231 T 15-10-2018 THII_2747 cba4349013f14c277ab8be71b0225634 1160 Gene3D G3DSA:3.40.50.300 556 795 1.4E-231 T 15-10-2018 THII_2747 cba4349013f14c277ab8be71b0225634 1160 Gene3D G3DSA:3.30.2060.10 134 219 2.5E-113 T 15-10-2018 THII_2747 cba4349013f14c277ab8be71b0225634 1160 Pfam PF00271 Helicase conserved C-terminal domain 814 923 1.5E-16 T 15-10-2018 IPR001650 Helicase, C-terminal THII_2747 cba4349013f14c277ab8be71b0225634 1160 SMART SM00982 1022 1122 1.3E-44 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 THII_2747 cba4349013f14c277ab8be71b0225634 1160 SUPERFAMILY SSF52540 537 797 1.49E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2747 cba4349013f14c277ab8be71b0225634 1160 SUPERFAMILY SSF143517 1008 1159 1.57E-40 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain THII_2747 cba4349013f14c277ab8be71b0225634 1160 Gene3D G3DSA:2.30.30.840 497 555 1.4E-231 T 15-10-2018 THII_2747 cba4349013f14c277ab8be71b0225634 1160 SMART SM00490 840 924 7.1E-18 T 15-10-2018 IPR001650 Helicase, C-terminal THII_2747 cba4349013f14c277ab8be71b0225634 1160 Gene3D G3DSA:3.40.50.11180 30 338 2.5E-113 T 15-10-2018 THII_1956 0ae1d7fa31a23c173becd0f4f3254591 301 SUPERFAMILY SSF55073 142 299 2.04E-33 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1956 0ae1d7fa31a23c173becd0f4f3254591 301 SMART SM00267 126 300 3.1E-35 T 15-10-2018 IPR000160 GGDEF domain THII_1956 0ae1d7fa31a23c173becd0f4f3254591 301 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 296 1.1E-31 T 15-10-2018 IPR000160 GGDEF domain THII_1956 0ae1d7fa31a23c173becd0f4f3254591 301 Gene3D G3DSA:3.30.70.270 131 300 1.1E-39 T 15-10-2018 THII_1956 0ae1d7fa31a23c173becd0f4f3254591 301 Pfam PF00990 Diguanylate cyclase, GGDEF domain 138 293 2.8E-34 T 15-10-2018 IPR000160 GGDEF domain THII_0217 6f42e6e51a253149b0b46780b8400ba8 310 Gene3D G3DSA:3.90.226.10 30 289 3.2E-83 T 15-10-2018 THII_0217 6f42e6e51a253149b0b46780b8400ba8 310 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 134 148 1.2E-39 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_0217 6f42e6e51a253149b0b46780b8400ba8 310 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 234 245 1.2E-39 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_0217 6f42e6e51a253149b0b46780b8400ba8 310 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 168 186 1.2E-39 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_0217 6f42e6e51a253149b0b46780b8400ba8 310 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 205 222 1.2E-39 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_0217 6f42e6e51a253149b0b46780b8400ba8 310 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 256 265 1.2E-39 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_0217 6f42e6e51a253149b0b46780b8400ba8 310 Pfam PF01039 Carboxyl transferase domain 109 245 3.0E-16 T 15-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 THII_0217 6f42e6e51a253149b0b46780b8400ba8 310 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 5 288 1.6E-128 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_0217 6f42e6e51a253149b0b46780b8400ba8 310 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 286 37.779 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_0217 6f42e6e51a253149b0b46780b8400ba8 310 SUPERFAMILY SSF52096 30 288 3.43E-85 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_1946 3518b0b635e1d812d1d780020b872b05 85 SUPERFAMILY SSF143011 1 82 1.24E-19 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1946 3518b0b635e1d812d1d780020b872b05 85 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 83 7.0E-9 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family THII_1946 3518b0b635e1d812d1d780020b872b05 85 Gene3D G3DSA:3.30.2310.20 1 84 1.3E-21 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1520 9caade242a151436a81ab9b099fa1df9 150 Gene3D G3DSA:3.30.70.1290 1 148 1.3E-39 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_1520 9caade242a151436a81ab9b099fa1df9 150 SMART SM01321 1 106 1.7E-24 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_1520 9caade242a151436a81ab9b099fa1df9 150 Pfam PF01797 Transposase IS200 like 7 105 3.6E-7 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_1520 9caade242a151436a81ab9b099fa1df9 150 SUPERFAMILY SSF143422 4 112 1.44E-24 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_3809 d4fe5f71e5078874b0d6ffd2ece2d799 476 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 250 441 3.0E-36 T 15-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 THII_3809 d4fe5f71e5078874b0d6ffd2ece2d799 476 Gene3D G3DSA:3.40.50.300 3 187 8.5E-26 T 15-10-2018 THII_3809 d4fe5f71e5078874b0d6ffd2ece2d799 476 Pfam PF13500 AAA domain 4 182 9.2E-13 T 15-10-2018 THII_3809 d4fe5f71e5078874b0d6ffd2ece2d799 476 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 8 456 6.6E-125 T 15-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 THII_3809 d4fe5f71e5078874b0d6ffd2ece2d799 476 SUPERFAMILY SSF52317 248 460 3.16E-32 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_3809 d4fe5f71e5078874b0d6ffd2ece2d799 476 SUPERFAMILY SSF52540 1 193 9.23E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3809 d4fe5f71e5078874b0d6ffd2ece2d799 476 Gene3D G3DSA:3.40.50.880 250 463 9.9E-10 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_2178 38d5f836c4293d2b849db7cd6baf13e5 121 SMART SM00448 3 116 7.3E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2178 38d5f836c4293d2b849db7cd6baf13e5 121 Pfam PF00072 Response regulator receiver domain 5 116 2.3E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2178 38d5f836c4293d2b849db7cd6baf13e5 121 Gene3D G3DSA:3.40.50.12740 1 121 1.2E-36 T 15-10-2018 THII_2178 38d5f836c4293d2b849db7cd6baf13e5 121 SUPERFAMILY SSF52172 4 121 1.04E-36 T 15-10-2018 IPR011006 CheY-like superfamily THII_3511 c94d4e28b8bfdd8a5eb12f13c9f8c485 342 Gene3D G3DSA:3.40.710.10 1 235 2.7E-91 T 15-10-2018 THII_3511 c94d4e28b8bfdd8a5eb12f13c9f8c485 342 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 236 325 2.6E-21 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_3511 c94d4e28b8bfdd8a5eb12f13c9f8c485 342 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 102 115 1.3E-19 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 THII_3511 c94d4e28b8bfdd8a5eb12f13c9f8c485 342 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 75 92 1.3E-19 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 THII_3511 c94d4e28b8bfdd8a5eb12f13c9f8c485 342 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 22 33 1.3E-19 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 THII_3511 c94d4e28b8bfdd8a5eb12f13c9f8c485 342 SUPERFAMILY SSF56601 2 236 1.44E-80 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like THII_3511 c94d4e28b8bfdd8a5eb12f13c9f8c485 342 SUPERFAMILY SSF69189 236 326 1.04E-20 T 15-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_3511 c94d4e28b8bfdd8a5eb12f13c9f8c485 342 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 3 216 3.5E-81 T 15-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 THII_3511 c94d4e28b8bfdd8a5eb12f13c9f8c485 342 SMART SM00936 236 326 3.5E-27 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_3511 c94d4e28b8bfdd8a5eb12f13c9f8c485 342 Gene3D G3DSA:2.60.410.10 236 326 7.5E-29 T 15-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_1805 7cf0e77f2fa9a3dc31ff05da585460ef 252 SUPERFAMILY SSF52980 51 190 1.18E-9 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1805 7cf0e77f2fa9a3dc31ff05da585460ef 252 Pfam PF05685 Putative restriction endonuclease 48 186 1.6E-16 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0053 487d27fc8e2552b9a8e4b9a093bba4bb 179 Gene3D G3DSA:3.90.1570.10 7 174 2.6E-19 T 15-10-2018 THII_0053 487d27fc8e2552b9a8e4b9a093bba4bb 179 Pfam PF05685 Putative restriction endonuclease 15 144 5.0E-12 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0053 487d27fc8e2552b9a8e4b9a093bba4bb 179 SUPERFAMILY SSF52980 19 171 5.9E-16 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0535 b619d5496bf5fe3cb378b14d4b002d95 575 PRINTS PR00046 Major sigma-70 factor signature 41 53 8.5E-6 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_0535 b619d5496bf5fe3cb378b14d4b002d95 575 PRINTS PR00046 Major sigma-70 factor signature 61 76 8.5E-6 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_0535 b619d5496bf5fe3cb378b14d4b002d95 575 PRINTS PR00046 Major sigma-70 factor signature 76 87 8.5E-6 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_0535 b619d5496bf5fe3cb378b14d4b002d95 575 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 61 87 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_0535 b619d5496bf5fe3cb378b14d4b002d95 575 Pfam PF04545 Sigma-70, region 4 42 88 3.2E-7 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 THII_0535 b619d5496bf5fe3cb378b14d4b002d95 575 SUPERFAMILY SSF88659 31 92 2.83E-8 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_0535 b619d5496bf5fe3cb378b14d4b002d95 575 Gene3D G3DSA:1.10.10.10 22 96 1.1E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1508 1f7811ab96fd73b0feaf23685208e1b4 101 Gene3D G3DSA:3.30.460.10 2 101 1.7E-17 T 15-10-2018 THII_1508 1f7811ab96fd73b0feaf23685208e1b4 101 Pfam PF01909 Nucleotidyltransferase domain 15 95 9.2E-8 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 THII_1508 1f7811ab96fd73b0feaf23685208e1b4 101 SUPERFAMILY SSF81301 5 98 1.57E-14 T 15-10-2018 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 468 1.5E-127 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 SUPERFAMILY SSF52374 6 313 1.15E-99 T 15-10-2018 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 320 8.6E-87 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 1.8E-21 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 1.8E-21 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 PRINTS PR00987 Glutamyl-tRNA synthetase signature 211 219 1.8E-21 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 205 1.8E-21 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 1.8E-21 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 Gene3D G3DSA:3.40.50.620 1 329 5.7E-121 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 Gene3D G3DSA:1.10.10.350 379 469 3.2E-17 T 15-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 5 468 27.653 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 THII_0891 df10501cbd68715b5a06d931a79f6ed8 470 SUPERFAMILY SSF48163 315 466 2.09E-25 T 15-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 THII_2546 93f7367ba3b1d2e8af61d05f951110a6 225 Pfam PF00691 OmpA family 106 201 4.4E-25 T 15-10-2018 IPR006665 OmpA-like domain THII_2546 93f7367ba3b1d2e8af61d05f951110a6 225 SUPERFAMILY SSF103088 85 207 1.57E-37 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_2546 93f7367ba3b1d2e8af61d05f951110a6 225 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 170 189 1.9E-6 T 15-10-2018 THII_2546 93f7367ba3b1d2e8af61d05f951110a6 225 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 152 169 1.9E-6 T 15-10-2018 THII_2546 93f7367ba3b1d2e8af61d05f951110a6 225 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 190 210 1.9E-6 T 15-10-2018 THII_2546 93f7367ba3b1d2e8af61d05f951110a6 225 Pfam PF13441 YMGG-like Gly-zipper 25 72 1.8E-8 T 15-10-2018 IPR027367 YMGG-like Gly-zipper THII_2546 93f7367ba3b1d2e8af61d05f951110a6 225 ProSitePatterns PS01068 OmpA-like domain. 139 183 - T 15-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 THII_2546 93f7367ba3b1d2e8af61d05f951110a6 225 Gene3D G3DSA:3.30.1330.60 69 217 6.1E-43 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_2546 93f7367ba3b1d2e8af61d05f951110a6 225 PRINTS PR01021 OMPA domain signature 107 129 2.3E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_2546 93f7367ba3b1d2e8af61d05f951110a6 225 PRINTS PR01021 OMPA domain signature 137 152 2.3E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_2546 93f7367ba3b1d2e8af61d05f951110a6 225 PRINTS PR01021 OMPA domain signature 152 168 2.3E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_1820 0c2079bafcfb6ce63a24d5f29c35b070 68 Pfam PF13499 EF-hand domain pair 5 68 7.4E-15 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1820 0c2079bafcfb6ce63a24d5f29c35b070 68 SMART SM00054 42 68 0.87 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1820 0c2079bafcfb6ce63a24d5f29c35b070 68 SMART SM00054 6 34 0.0069 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1820 0c2079bafcfb6ce63a24d5f29c35b070 68 ProSitePatterns PS00018 EF-hand calcium-binding domain. 51 63 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site THII_1820 0c2079bafcfb6ce63a24d5f29c35b070 68 Gene3D G3DSA:1.10.238.10 1 68 2.0E-20 T 15-10-2018 THII_1820 0c2079bafcfb6ce63a24d5f29c35b070 68 SUPERFAMILY SSF47473 3 67 2.07E-19 T 15-10-2018 IPR011992 EF-hand domain pair THII_2278 7f77f41d9eb25ab08287406eadf54ad9 751 Pfam PF13187 4Fe-4S dicluster domain 546 590 1.3E-7 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2278 7f77f41d9eb25ab08287406eadf54ad9 751 Gene3D G3DSA:3.50.50.60 127 271 6.1E-15 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2278 7f77f41d9eb25ab08287406eadf54ad9 751 SUPERFAMILY SSF54862 512 596 9.78E-19 T 15-10-2018 THII_2278 7f77f41d9eb25ab08287406eadf54ad9 751 Gene3D G3DSA:3.30.70.20 538 610 1.3E-11 T 15-10-2018 THII_2278 7f77f41d9eb25ab08287406eadf54ad9 751 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 620 745 4.6E-39 T 15-10-2018 IPR003813 F420-non-reducing hydrogenase iron-sulfur subunit D GO:0055114 THII_2278 7f77f41d9eb25ab08287406eadf54ad9 751 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 141 266 1.1E-9 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_2278 7f77f41d9eb25ab08287406eadf54ad9 751 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 576 587 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2278 7f77f41d9eb25ab08287406eadf54ad9 751 SUPERFAMILY SSF51905 141 520 7.77E-24 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2278 7f77f41d9eb25ab08287406eadf54ad9 751 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 163 3.9E-5 T 15-10-2018 THII_2278 7f77f41d9eb25ab08287406eadf54ad9 751 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 422 3.9E-5 T 15-10-2018 THII_2278 7f77f41d9eb25ab08287406eadf54ad9 751 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 546 557 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0935 e9cc6a04415831f77df43b8a3c3eb257 803 Gene3D G3DSA:3.30.420.10 3 160 6.4E-16 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 THII_0935 e9cc6a04415831f77df43b8a3c3eb257 803 SMART SM00479 6 159 5.9E-11 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_0935 e9cc6a04415831f77df43b8a3c3eb257 803 SUPERFAMILY SSF52540 211 348 4.53E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0935 e9cc6a04415831f77df43b8a3c3eb257 803 Pfam PF00929 Exonuclease 62 150 3.5E-5 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_0935 e9cc6a04415831f77df43b8a3c3eb257 803 SUPERFAMILY SSF53098 6 189 1.46E-19 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_0935 e9cc6a04415831f77df43b8a3c3eb257 803 SUPERFAMILY SSF52540 176 528 4.06E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0935 e9cc6a04415831f77df43b8a3c3eb257 803 Gene3D G3DSA:3.40.50.300 188 305 1.6E-8 T 15-10-2018 THII_3057 e2b9cc4655a35eeb0829e44f58af4e83 470 Gene3D G3DSA:2.60.120.10 349 457 2.5E-18 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_3057 e2b9cc4655a35eeb0829e44f58af4e83 470 Pfam PF01050 Mannose-6-phosphate isomerase 315 465 5.9E-70 T 15-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 THII_3057 e2b9cc4655a35eeb0829e44f58af4e83 470 SUPERFAMILY SSF51182 185 469 2.23E-91 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily THII_3057 e2b9cc4655a35eeb0829e44f58af4e83 470 Gene3D G3DSA:3.90.550.10 2 348 4.8E-118 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3057 e2b9cc4655a35eeb0829e44f58af4e83 470 Pfam PF00483 Nucleotidyl transferase 4 286 5.8E-69 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 THII_3057 e2b9cc4655a35eeb0829e44f58af4e83 470 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 469 9.6E-222 T 15-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 THII_3057 e2b9cc4655a35eeb0829e44f58af4e83 470 SUPERFAMILY SSF53448 2 282 1.54E-72 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2621 fe800fd06b51d80d83a621f9a47adf92 117 Pfam PF05954 Phage late control gene D protein (GPD) 32 103 1.4E-15 T 15-10-2018 THII_2621 fe800fd06b51d80d83a621f9a47adf92 117 Gene3D G3DSA:2.30.110.50 7 115 5.7E-29 T 15-10-2018 THII_2621 fe800fd06b51d80d83a621f9a47adf92 117 SUPERFAMILY SSF69279 13 106 3.06E-18 T 15-10-2018 THII_2388 feb0cebc7168f00aa4b2239529fcd9d0 809 Gene3D G3DSA:1.25.40.10 167 267 7.8E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2388 feb0cebc7168f00aa4b2239529fcd9d0 809 Pfam PF12770 CHAT domain 537 806 7.4E-62 T 15-10-2018 IPR024983 CHAT domain THII_2388 feb0cebc7168f00aa4b2239529fcd9d0 809 Gene3D G3DSA:1.25.40.10 268 476 3.3E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2388 feb0cebc7168f00aa4b2239529fcd9d0 809 SMART SM00028 314 347 340.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2388 feb0cebc7168f00aa4b2239529fcd9d0 809 SMART SM00028 213 246 12.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2388 feb0cebc7168f00aa4b2239529fcd9d0 809 SMART SM00028 81 114 80.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2388 feb0cebc7168f00aa4b2239529fcd9d0 809 SMART SM00028 173 206 74.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2388 feb0cebc7168f00aa4b2239529fcd9d0 809 SMART SM00028 363 396 17.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2388 feb0cebc7168f00aa4b2239529fcd9d0 809 Gene3D G3DSA:1.25.40.10 49 166 5.2E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2388 feb0cebc7168f00aa4b2239529fcd9d0 809 SUPERFAMILY SSF48452 59 263 4.75E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0950 b9f405e81afed5dd9e178d9e57202a91 907 SUPERFAMILY SSF58104 580 861 1.07E-70 T 15-10-2018 THII_0950 b9f405e81afed5dd9e178d9e57202a91 907 Gene3D G3DSA:3.30.450.20 396 516 7.1E-34 T 15-10-2018 THII_0950 b9f405e81afed5dd9e178d9e57202a91 907 SUPERFAMILY SSF55785 387 507 1.12E-5 T 15-10-2018 IPR035965 PAS domain superfamily THII_0950 b9f405e81afed5dd9e178d9e57202a91 907 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 672 828 8.3E-52 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_0950 b9f405e81afed5dd9e178d9e57202a91 907 SMART SM00283 613 860 1.4E-86 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_0950 b9f405e81afed5dd9e178d9e57202a91 907 SMART SM01358 37 293 1.7E-32 T 15-10-2018 IPR032255 Helical bimodular sensor domain THII_0950 b9f405e81afed5dd9e178d9e57202a91 907 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 138 1.5E-10 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain THII_0950 b9f405e81afed5dd9e178d9e57202a91 907 Gene3D G3DSA:1.10.287.950 563 862 5.5E-84 T 15-10-2018 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Gene3D G3DSA:3.30.450.20 228 342 1.1E-22 T 15-10-2018 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Gene3D G3DSA:3.30.565.10 509 668 3.6E-51 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Gene3D G3DSA:3.40.50.12740 709 858 3.8E-44 T 15-10-2018 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 SUPERFAMILY SSF158472 373 421 6.02E-12 T 15-10-2018 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Pfam PF00672 HAMP domain 373 420 4.2E-13 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 SUPERFAMILY SSF103190 147 236 4.08E-5 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 SMART SM00387 553 664 2.1E-41 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 SUPERFAMILY SSF47384 424 507 4.12E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Pfam PF00512 His Kinase A (phospho-acceptor) domain 440 505 9.7E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Gene3D G3DSA:1.20.1480.50 343 427 1.6E-17 T 15-10-2018 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 SMART SM00044 827 1023 9.6E-12 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 617 4.1E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 603 4.1E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 661 4.1E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 642 4.1E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 SMART SM00388 439 507 1.8E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Pfam PF00072 Response regulator receiver domain 711 824 7.5E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 662 2.9E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 SUPERFAMILY SSF55874 496 664 4.94E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 863 1039 4.0E-35 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 SMART SM00304 372 424 2.2E-15 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Gene3D G3DSA:3.30.450.20 160 227 1.1E-22 T 15-10-2018 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Gene3D G3DSA:1.10.287.130 428 508 8.7E-22 T 15-10-2018 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Gene3D G3DSA:3.30.70.1230 859 1055 3.1E-56 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 SUPERFAMILY SSF55073 859 1043 4.55E-54 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 Pfam PF02743 Cache domain 47 335 1.5E-23 T 15-10-2018 IPR033479 Double Cache domain 1 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 SMART SM00448 709 823 5.2E-45 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2325 de8f902d1094ae066f6bd612517eb7d3 1109 SUPERFAMILY SSF52172 708 831 3.42E-40 T 15-10-2018 IPR011006 CheY-like superfamily THII_0669 1a1540fec05c270911ca9cf59088624e 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 185 3.1E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_0669 1a1540fec05c270911ca9cf59088624e 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 9.3E-36 T 15-10-2018 THII_0669 1a1540fec05c270911ca9cf59088624e 218 Gene3D G3DSA:1.10.150.240 20 86 4.0E-52 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THII_0669 1a1540fec05c270911ca9cf59088624e 218 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 8 207 1.1E-50 T 15-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 THII_0669 1a1540fec05c270911ca9cf59088624e 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 181 1.6E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_0669 1a1540fec05c270911ca9cf59088624e 218 Gene3D G3DSA:3.40.50.1000 8 194 4.0E-52 T 15-10-2018 IPR023214 HAD superfamily THII_0669 1a1540fec05c270911ca9cf59088624e 218 SUPERFAMILY SSF56784 5 217 3.69E-50 T 15-10-2018 IPR036412 HAD-like superfamily THII_2631 0060f10d31a37f90049fe4609aa9f2de 174 SUPERFAMILY SSF46565 6 78 6.41E-17 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_2631 0060f10d31a37f90049fe4609aa9f2de 174 Pfam PF07743 HSCB C-terminal oligomerisation domain 91 165 3.3E-18 T 15-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 THII_2631 0060f10d31a37f90049fe4609aa9f2de 174 SMART SM00271 5 70 1.7E-6 T 15-10-2018 IPR001623 DnaJ domain THII_2631 0060f10d31a37f90049fe4609aa9f2de 174 Gene3D G3DSA:1.20.1280.20 84 174 6.2E-25 T 15-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 THII_2631 0060f10d31a37f90049fe4609aa9f2de 174 SUPERFAMILY SSF47144 82 173 1.83E-19 T 15-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 THII_2631 0060f10d31a37f90049fe4609aa9f2de 174 Gene3D G3DSA:1.10.287.110 5 83 7.7E-24 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_2631 0060f10d31a37f90049fe4609aa9f2de 174 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 17 172 2.3E-33 T 15-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 THII_2631 0060f10d31a37f90049fe4609aa9f2de 174 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 5 174 22.863 T 15-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 THII_3730 f2f1860db8141d5787777741f6f3173b 65 SUPERFAMILY SSF54786 1 63 5.1E-18 T 15-10-2018 THII_3730 f2f1860db8141d5787777741f6f3173b 65 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 59 1.1E-19 T 15-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 THII_3730 f2f1860db8141d5787777741f6f3173b 65 Gene3D G3DSA:3.30.920.30 1 59 6.8E-28 T 15-10-2018 IPR038570 HicA superfamily THII_2605 d63f182b8220af9096d3f184b60da8f0 356 Pfam PF12857 TOBE-like domain 288 344 1.2E-13 T 15-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 THII_2605 d63f182b8220af9096d3f184b60da8f0 356 SUPERFAMILY SSF52540 3 246 3.45E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2605 d63f182b8220af9096d3f184b60da8f0 356 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_2605 d63f182b8220af9096d3f184b60da8f0 356 SUPERFAMILY SSF50331 240 343 5.1E-12 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal THII_2605 d63f182b8220af9096d3f184b60da8f0 356 SMART SM00382 27 214 6.1E-19 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2605 d63f182b8220af9096d3f184b60da8f0 356 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 1.5E-116 T 15-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 THII_2605 d63f182b8220af9096d3f184b60da8f0 356 Pfam PF00005 ABC transporter 18 164 4.2E-36 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2605 d63f182b8220af9096d3f184b60da8f0 356 Gene3D G3DSA:3.40.50.300 2 294 1.9E-80 T 15-10-2018 THII_3130 181bc7639b6a2bd01852bdb47ee5e6dc 501 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 385 482 9.6E-18 T 15-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis THII_3130 181bc7639b6a2bd01852bdb47ee5e6dc 501 Pfam PF04055 Radical SAM superfamily 61 241 5.4E-24 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_3130 181bc7639b6a2bd01852bdb47ee5e6dc 501 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 61 72 - T 15-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_3130 181bc7639b6a2bd01852bdb47ee5e6dc 501 SUPERFAMILY SSF53146 373 488 1.96E-27 T 15-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THII_3130 181bc7639b6a2bd01852bdb47ee5e6dc 501 Gene3D G3DSA:3.20.20.70 48 351 2.8E-31 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3130 181bc7639b6a2bd01852bdb47ee5e6dc 501 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 34 483 7.4E-191 T 15-10-2018 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 THII_3130 181bc7639b6a2bd01852bdb47ee5e6dc 501 Gene3D G3DSA:3.30.420.130 372 492 3.2E-26 T 15-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THII_3130 181bc7639b6a2bd01852bdb47ee5e6dc 501 SUPERFAMILY SSF102114 50 269 1.31E-34 T 15-10-2018 THII_3362 220d7930682f54b26a23b2b3ba047e88 390 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 15-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 THII_3362 220d7930682f54b26a23b2b3ba047e88 390 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.857 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 THII_3362 220d7930682f54b26a23b2b3ba047e88 390 Pfam PF00549 CoA-ligase 262 382 2.4E-27 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 THII_3362 220d7930682f54b26a23b2b3ba047e88 390 PIRSF PIRSF001554 1 388 5.3E-152 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 THII_3362 220d7930682f54b26a23b2b3ba047e88 390 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.5E-161 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 THII_3362 220d7930682f54b26a23b2b3ba047e88 390 Pfam PF08442 ATP-grasp domain 2 202 2.8E-76 T 15-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 THII_3362 220d7930682f54b26a23b2b3ba047e88 390 SUPERFAMILY SSF56059 1 238 5.83E-76 T 15-10-2018 THII_3362 220d7930682f54b26a23b2b3ba047e88 390 Gene3D G3DSA:3.30.470.20 1 234 1.9E-90 T 15-10-2018 THII_3362 220d7930682f54b26a23b2b3ba047e88 390 Gene3D G3DSA:3.30.1490.20 21 104 1.9E-90 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 THII_3362 220d7930682f54b26a23b2b3ba047e88 390 SUPERFAMILY SSF52210 239 385 2.88E-53 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 THII_3362 220d7930682f54b26a23b2b3ba047e88 390 Gene3D G3DSA:3.40.50.261 240 388 6.5E-56 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 THII_3035 98ddc0007785dd510ded3858017cf83e 307 Gene3D G3DSA:3.40.1190.20 1 306 1.3E-68 T 15-10-2018 IPR029056 Ribokinase-like THII_3035 98ddc0007785dd510ded3858017cf83e 307 Pfam PF00294 pfkB family carbohydrate kinase 2 299 1.6E-40 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB THII_3035 98ddc0007785dd510ded3858017cf83e 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 242 255 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 THII_3035 98ddc0007785dd510ded3858017cf83e 307 SUPERFAMILY SSF53613 2 301 4.83E-60 T 15-10-2018 IPR029056 Ribokinase-like THII_0344 aa4220b48335a31c15eb6c9887cc510c 134 Pfam PF01381 Helix-turn-helix 7 61 2.6E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_0344 aa4220b48335a31c15eb6c9887cc510c 134 Gene3D G3DSA:1.10.260.40 1 81 1.7E-15 T 15-10-2018 THII_0344 aa4220b48335a31c15eb6c9887cc510c 134 SUPERFAMILY SSF47413 1 68 3.75E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_0344 aa4220b48335a31c15eb6c9887cc510c 134 SMART SM00530 6 61 2.9E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 SUPERFAMILY SSF54211 671 847 2.31E-49 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 Gene3D G3DSA:3.30.230.10 670 848 4.3E-72 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 SMART SM00382 426 571 2.1E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 Hamap MF_01973 Lon protease [lon]. 84 847 60.862 T 15-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 PIRSF PIRSF001174 71 848 2.4E-290 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 SUPERFAMILY SSF52540 388 665 2.09E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 SMART SM00464 83 279 9.1E-37 T 15-10-2018 IPR003111 Lon, substrate-binding domain THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 Gene3D G3DSA:2.30.130.40 73 191 9.2E-20 T 15-10-2018 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 Gene3D G3DSA:1.10.8.60 570 662 3.2E-28 T 15-10-2018 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 Gene3D G3DSA:1.20.58.1480 197 323 7.7E-30 T 15-10-2018 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 SUPERFAMILY SSF88697 84 278 2.01E-24 T 15-10-2018 IPR015947 PUA-like superfamily THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 648 846 8.0E-77 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 430 567 3.1E-22 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 753 761 - T 15-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 803 821 2.4E-49 T 15-10-2018 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 687 2.4E-49 T 15-10-2018 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 750 769 2.4E-49 T 15-10-2018 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 434 453 2.4E-49 T 15-10-2018 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 780 799 2.4E-49 T 15-10-2018 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 84 279 2.6E-30 T 15-10-2018 IPR003111 Lon, substrate-binding domain THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 Gene3D G3DSA:3.40.50.300 392 569 3.6E-63 T 15-10-2018 THII_3098 0d2e9cbefa28b042c8179e46c132fb79 848 TIGRFAM TIGR00763 lon: endopeptidase La 85 846 3.2E-297 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 THII_1458 2706c296fdf00959d93bc64a325baa7f 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 254 4.7E-84 T 15-10-2018 THII_1458 2706c296fdf00959d93bc64a325baa7f 258 SUPERFAMILY SSF56219 2 256 2.22E-77 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_1458 2706c296fdf00959d93bc64a325baa7f 258 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 15-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 THII_1458 2706c296fdf00959d93bc64a325baa7f 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 255 3.9E-80 T 15-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 THII_1458 2706c296fdf00959d93bc64a325baa7f 258 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 15-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 THII_1458 2706c296fdf00959d93bc64a325baa7f 258 Gene3D G3DSA:3.60.10.10 1 256 3.0E-74 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_1458 2706c296fdf00959d93bc64a325baa7f 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 247 1.3E-17 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 SUPERFAMILY SSF52058 367 516 9.78E-29 T 15-10-2018 THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 SUPERFAMILY SSF49313 1434 1528 2.71E-8 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 Gene3D G3DSA:2.60.40.10 536 638 4.9E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 Gene3D G3DSA:3.80.10.10 340 535 1.5E-33 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 Gene3D G3DSA:2.60.40.10 993 1102 4.4E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 SMART SM00060 538 620 1.1E-4 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 SUPERFAMILY SSF49313 1223 1312 1.86E-7 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 Gene3D G3DSA:2.60.40.60 1221 1315 3.0E-9 T 15-10-2018 THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 SUPERFAMILY SSF49265 539 645 3.12E-12 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 TIGRFAM TIGR01376 POMP_repeat: chlamydial polymorphic outer membrane protein repeat 175 196 0.0013 T 15-10-2018 IPR003368 Polymorphic outer membrane protein repeat THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 SUPERFAMILY SSF51126 21 326 2.96E-25 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 Pfam PF00041 Fibronectin type III domain 540 614 4.0E-8 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 SMART SM00710 109 134 530.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 SMART SM00710 139 165 1400.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 SMART SM00710 193 218 830.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 SMART SM00710 166 192 1200.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0415 89a9f6d54656e575c235728bfa7f2c69 1763 Gene3D G3DSA:2.60.40.60 1434 1537 2.2E-7 T 15-10-2018 THII_0515 6aa65cf15d5a766f278c389fb3a91f6c 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 9 250 7.8E-75 T 15-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 THII_0515 6aa65cf15d5a766f278c389fb3a91f6c 255 SUPERFAMILY SSF53474 2 250 4.85E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_0515 6aa65cf15d5a766f278c389fb3a91f6c 255 Gene3D G3DSA:3.40.50.1820 2 251 1.8E-64 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_0515 6aa65cf15d5a766f278c389fb3a91f6c 255 Pfam PF00561 alpha/beta hydrolase fold 13 239 1.0E-21 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_0515 6aa65cf15d5a766f278c389fb3a91f6c 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 3 252 38.25 T 15-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 THII_0658 4fcc4dbe3efab622f9d275c71fb89dc8 481 SMART SM00382 252 377 0.003 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0658 4fcc4dbe3efab622f9d275c71fb89dc8 481 Gene3D G3DSA:3.30.450.90 123 229 6.6E-26 T 15-10-2018 THII_0658 4fcc4dbe3efab622f9d275c71fb89dc8 481 Gene3D G3DSA:3.30.450.90 1 97 8.9E-17 T 15-10-2018 THII_0658 4fcc4dbe3efab622f9d275c71fb89dc8 481 Gene3D G3DSA:3.40.50.300 230 480 1.3E-88 T 15-10-2018 THII_0658 4fcc4dbe3efab622f9d275c71fb89dc8 481 SUPERFAMILY SSF52540 134 466 6.82E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0658 4fcc4dbe3efab622f9d275c71fb89dc8 481 Pfam PF00437 Type II/IV secretion system protein 245 376 1.5E-34 T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_0658 4fcc4dbe3efab622f9d275c71fb89dc8 481 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 132 473 5.5E-124 T 15-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 THII_3689 07e87bbc36dae3bd6f884de8e0c7622d 236 SUPERFAMILY SSF53335 52 215 3.26E-22 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3689 07e87bbc36dae3bd6f884de8e0c7622d 236 Pfam PF13649 Methyltransferase domain 90 187 5.0E-6 T 15-10-2018 THII_3689 07e87bbc36dae3bd6f884de8e0c7622d 236 Gene3D G3DSA:3.40.50.150 50 195 2.1E-16 T 15-10-2018 THII_3897 ee7399d635ac318aef06b3fd9ed78162 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 7.3E-223 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3897 ee7399d635ac318aef06b3fd9ed78162 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 44.094 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3897 ee7399d635ac318aef06b3fd9ed78162 515 SMART SM00917 370 500 6.0E-40 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3897 ee7399d635ac318aef06b3fd9ed78162 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3897 ee7399d635ac318aef06b3fd9ed78162 515 Gene3D G3DSA:3.30.160.270 387 500 2.1E-11 T 15-10-2018 THII_3897 ee7399d635ac318aef06b3fd9ed78162 515 Gene3D G3DSA:3.20.20.70 1 322 1.4E-138 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3897 ee7399d635ac318aef06b3fd9ed78162 515 SUPERFAMILY SSF110921 393 499 6.41E-24 T 15-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3897 ee7399d635ac318aef06b3fd9ed78162 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3897 ee7399d635ac318aef06b3fd9ed78162 515 SUPERFAMILY SSF51569 1 291 1.03E-100 T 15-10-2018 THII_3897 ee7399d635ac318aef06b3fd9ed78162 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 500 1.6E-37 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3897 ee7399d635ac318aef06b3fd9ed78162 515 Pfam PF00682 HMGL-like 5 273 3.1E-100 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 THII_0858 d8a5f695710dfc14f4afc7a83768b18d 128 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0858 d8a5f695710dfc14f4afc7a83768b18d 128 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 3.9E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0858 d8a5f695710dfc14f4afc7a83768b18d 128 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 1.8E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0584 707c9aac66698de51e56960e7b79c756 156 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 151 5.5E-63 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 THII_0584 707c9aac66698de51e56960e7b79c756 156 Pfam PF01625 Peptide methionine sulfoxide reductase 3 154 2.1E-65 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 THII_0584 707c9aac66698de51e56960e7b79c756 156 SUPERFAMILY SSF55068 2 155 8.24E-71 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 THII_0584 707c9aac66698de51e56960e7b79c756 156 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 156 35.645 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 THII_0584 707c9aac66698de51e56960e7b79c756 156 Gene3D G3DSA:3.30.1060.10 1 156 2.6E-72 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 THII_3766 3d0cbdbb5f35a3d841ce16189b51ac81 283 Pfam PF01564 Spermine/spermidine synthase domain 63 239 1.5E-46 T 15-10-2018 THII_3766 3d0cbdbb5f35a3d841ce16189b51ac81 283 Gene3D G3DSA:3.40.50.150 59 282 4.0E-63 T 15-10-2018 THII_3766 3d0cbdbb5f35a3d841ce16189b51ac81 283 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 282 35.753 T 15-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 THII_3766 3d0cbdbb5f35a3d841ce16189b51ac81 283 SUPERFAMILY SSF53335 13 281 2.76E-75 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3766 3d0cbdbb5f35a3d841ce16189b51ac81 283 Gene3D G3DSA:2.30.140.10 3 58 2.3E-20 T 15-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 THII_3766 3d0cbdbb5f35a3d841ce16189b51ac81 283 TIGRFAM TIGR00417 speE: spermidine synthase 7 276 4.8E-82 T 15-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 THII_3766 3d0cbdbb5f35a3d841ce16189b51ac81 283 Pfam PF17284 Spermidine synthase tetramerisation domain 7 58 2.7E-16 T 15-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 THII_3766 3d0cbdbb5f35a3d841ce16189b51ac81 283 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 83 96 - T 15-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 THII_1727 a42f5733ae86879293553c675265625a 1642 SUPERFAMILY SSF52540 1237 1476 3.54E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1727 a42f5733ae86879293553c675265625a 1642 SMART SM00952 1566 1620 0.0052 T 15-10-2018 IPR013584 RAP domain THII_1727 a42f5733ae86879293553c675265625a 1642 Pfam PF13195 Protein of unknown function (DUF4011) 17 199 4.6E-41 T 15-10-2018 IPR025103 Protein of unknown function DUF4011 THII_1727 a42f5733ae86879293553c675265625a 1642 Gene3D G3DSA:3.40.50.300 1302 1517 1.8E-26 T 15-10-2018 THII_1727 a42f5733ae86879293553c675265625a 1642 Pfam PF13086 AAA domain 308 375 2.7E-7 T 15-10-2018 THII_1727 a42f5733ae86879293553c675265625a 1642 Pfam PF13086 AAA domain 1219 1258 1.7E-7 T 15-10-2018 THII_1727 a42f5733ae86879293553c675265625a 1642 Gene3D G3DSA:3.40.50.300 1074 1279 1.3E-18 T 15-10-2018 THII_1727 a42f5733ae86879293553c675265625a 1642 Gene3D G3DSA:3.40.50.300 245 487 4.0E-24 T 15-10-2018 THII_1727 a42f5733ae86879293553c675265625a 1642 SUPERFAMILY SSF52540 308 1324 4.15E-29 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1727 a42f5733ae86879293553c675265625a 1642 Pfam PF13087 AAA domain 1291 1474 1.3E-12 T 15-10-2018 THII_1727 a42f5733ae86879293553c675265625a 1642 SUPERFAMILY SSF52980 1517 1627 1.02E-15 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1727 a42f5733ae86879293553c675265625a 1642 Gene3D G3DSA:3.40.960.10 1519 1625 7.2E-17 T 15-10-2018 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Gene3D G3DSA:3.20.20.80 1408 1598 2.2E-44 T 15-10-2018 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 399 478 2.5E-15 T 15-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 SUPERFAMILY SSF51011 394 481 2.61E-31 T 15-10-2018 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 SUPERFAMILY SSF51445 794 1221 3.38E-108 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Gene3D G3DSA:3.20.20.80 17 391 4.7E-152 T 15-10-2018 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Gene3D G3DSA:3.20.20.80 1599 1899 2.8E-33 T 15-10-2018 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Gene3D G3DSA:2.60.40.1180 392 481 1.6E-33 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 SUPERFAMILY SSF51445 22 387 8.37E-86 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 PRINTS PR00110 Alpha-amylase signature 227 245 9.8E-24 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 PRINTS PR00110 Alpha-amylase signature 70 87 9.8E-24 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 PRINTS PR00110 Alpha-amylase signature 288 300 9.8E-24 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 PRINTS PR00110 Alpha-amylase signature 198 209 9.8E-24 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 PRINTS PR00110 Alpha-amylase signature 102 113 9.8E-24 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 696 767 8.4E-6 T 15-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 SMART SM00632 396 481 9.3E-35 T 15-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Gene3D G3DSA:3.20.20.80 784 1223 8.1E-149 T 15-10-2018 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 695 1286 3.5E-160 T 15-10-2018 IPR011840 Pullulanase, type I THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 SUPERFAMILY SSF51445 1407 1905 9.22E-66 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Pfam PF00128 Alpha amylase, catalytic domain 1447 1719 9.8E-33 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Pfam PF00128 Alpha amylase, catalytic domain 842 936 1.1E-9 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Pfam PF00128 Alpha amylase, catalytic domain 84 329 7.6E-21 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Gene3D G3DSA:2.60.40.10 677 783 1.4E-14 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 SUPERFAMILY SSF81296 689 788 7.0E-12 T 15-10-2018 IPR014756 Immunoglobulin E-set THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Gene3D G3DSA:2.60.40.10 1318 1407 2.2E-18 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 Gene3D G3DSA:2.60.40.1180 1225 1310 1.0E-8 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 SMART SM00642 1417 1898 2.8E-43 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 SMART SM00642 25 386 5.3E-95 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 THII_0266 bd87084ad1204c72ee7fa02cda004b90 1998 SMART SM00642 808 1214 2.7E-8 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 Pfam PF00512 His Kinase A (phospho-acceptor) domain 329 397 2.7E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 Pfam PF00072 Response regulator receiver domain 14 123 4.0E-6 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 Gene3D G3DSA:3.30.565.10 399 574 3.7E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 SUPERFAMILY SSF52172 12 154 1.12E-10 T 15-10-2018 IPR011006 CheY-like superfamily THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 Gene3D G3DSA:1.10.287.130 314 398 5.1E-22 T 15-10-2018 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 551 1.2E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 526 1.2E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 512 1.2E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 570 1.2E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 Gene3D G3DSA:3.40.50.2300 2 156 3.7E-13 T 15-10-2018 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 SUPERFAMILY SSF47384 315 398 7.65E-19 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 SMART SM00387 443 573 1.7E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 Pfam PF11849 Domain of unknown function (DUF3369) 135 301 8.6E-28 T 15-10-2018 IPR021800 Domain of unknown function DUF3369 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 SMART SM00388 329 397 3.9E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 Gene3D G3DSA:3.30.450.40 185 313 2.1E-9 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 SUPERFAMILY SSF55874 387 572 7.99E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 SUPERFAMILY SSF55781 153 317 9.16E-11 T 15-10-2018 THII_3043 3f7cc6b14272ec499b7880d08820ef4c 581 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 444 571 4.8E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 SUPERFAMILY SSF50249 134 201 8.99E-20 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 345 9.6E-125 T 15-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 SUPERFAMILY SSF47794 357 418 6.44E-15 T 15-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 Gene3D G3DSA:3.30.300.20 201 279 4.5E-29 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 Gene3D G3DSA:2.40.50.140 137 200 1.7E-21 T 15-10-2018 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 SMART SM00316 135 202 1.2E-11 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 Gene3D G3DSA:1.10.150.20 440 498 5.2E-20 T 15-10-2018 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 SUPERFAMILY SSF69705 1 128 1.11E-39 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 SUPERFAMILY SSF47794 439 501 1.73E-14 T 15-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 SMART SM00322 303 362 0.022 T 15-10-2018 IPR004087 K Homology domain GO:0003676 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 SMART SM00322 232 295 12.0 T 15-10-2018 IPR004087 K Homology domain GO:0003676 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 SUPERFAMILY SSF54814 202 280 3.14E-28 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 Pfam PF00575 S1 RNA binding domain 134 184 4.2E-6 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 Gene3D G3DSA:3.30.1480.10 1 131 5.9E-42 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 Pfam PF14520 Helix-hairpin-helix domain 441 495 3.5E-7 T 15-10-2018 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 Pfam PF13184 NusA-like KH domain 232 299 2.4E-28 T 15-10-2018 IPR025249 KH domain, NusA-like GO:0003723 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 449 498 1.8E-14 T 15-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 416 4.8E-19 T 15-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 29.642 T 15-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 Gene3D G3DSA:3.30.300.20 280 349 9.5E-27 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 SUPERFAMILY SSF54814 281 344 7.19E-16 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 Gene3D G3DSA:1.10.150.20 354 423 2.9E-27 T 15-10-2018 THII_1176 f30bf1374d51087ff17fb35b24a64b26 504 Pfam PF08529 NusA N-terminal domain 4 125 4.1E-36 T 15-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 THII_3733 420c7e26bacfa3f3ef04c56e5a793d89 96 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 5 96 2.3E-18 T 15-10-2018 IPR007711 Toxin HigB-1 THII_3733 420c7e26bacfa3f3ef04c56e5a793d89 96 SUPERFAMILY SSF143011 1 96 1.31E-14 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_3733 420c7e26bacfa3f3ef04c56e5a793d89 96 Gene3D G3DSA:3.30.2310.20 1 96 9.4E-20 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2738 f608c9bce9bcb6d6e676e5d14f6a7f1e 268 SUPERFAMILY SSF52540 38 230 2.97E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2738 f608c9bce9bcb6d6e676e5d14f6a7f1e 268 Gene3D G3DSA:3.40.50.300 6 262 6.1E-40 T 15-10-2018 THII_2738 f608c9bce9bcb6d6e676e5d14f6a7f1e 268 SMART SM00382 35 256 9.6E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2738 f608c9bce9bcb6d6e676e5d14f6a7f1e 268 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_2738 f608c9bce9bcb6d6e676e5d14f6a7f1e 268 Pfam PF00005 ABC transporter 39 196 1.0E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_0686 55103ed203d1905bb2126069e0d0705b 246 SMART SM00850 142 239 5.7E-26 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 THII_0686 55103ed203d1905bb2126069e0d0705b 246 Pfam PF04397 LytTr DNA-binding domain 143 238 2.7E-21 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 THII_0686 55103ed203d1905bb2126069e0d0705b 246 Gene3D G3DSA:3.40.50.2300 1 129 4.8E-36 T 15-10-2018 THII_0686 55103ed203d1905bb2126069e0d0705b 246 Pfam PF00072 Response regulator receiver domain 3 112 3.1E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0686 55103ed203d1905bb2126069e0d0705b 246 SUPERFAMILY SSF52172 1 132 1.57E-34 T 15-10-2018 IPR011006 CheY-like superfamily THII_0686 55103ed203d1905bb2126069e0d0705b 246 SMART SM00448 1 112 1.0E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0686 55103ed203d1905bb2126069e0d0705b 246 Gene3D G3DSA:2.40.50.1020 131 233 5.5E-9 T 15-10-2018 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SUPERFAMILY SSF55874 959 1138 3.8E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Pfam PF00512 His Kinase A (phospho-acceptor) domain 903 970 2.8E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SMART SM00387 1017 1141 3.4E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Gene3D G3DSA:3.30.450.40 636 810 8.1E-19 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Pfam PF13185 GAF domain 664 803 3.8E-13 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SUPERFAMILY SSF52172 1319 1421 1.57E-10 T 15-10-2018 IPR011006 CheY-like superfamily THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Pfam PF00072 Response regulator receiver domain 1466 1578 4.1E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Pfam PF00072 Response regulator receiver domain 1321 1422 1.0E-8 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Pfam PF00072 Response regulator receiver domain 1199 1306 4.2E-17 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SUPERFAMILY SSF52172 1195 1310 5.27E-25 T 15-10-2018 IPR011006 CheY-like superfamily THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1018 1140 1.1E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Gene3D G3DSA:3.40.50.2300 1318 1450 2.0E-11 T 15-10-2018 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1066 1080 4.4E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1084 1094 4.4E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1125 1138 4.4E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1101 1119 4.4E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SUPERFAMILY SSF52172 1463 1582 6.97E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SMART SM00065 665 813 2.7E-8 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Gene3D G3DSA:3.30.450.20 187 331 2.9E-6 T 15-10-2018 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SMART SM00304 454 506 36.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SMART SM00304 544 596 0.03 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SUPERFAMILY SSF55781 633 803 2.7E-25 T 15-10-2018 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Gene3D G3DSA:1.10.287.130 862 968 5.2E-25 T 15-10-2018 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Gene3D G3DSA:3.40.50.12740 1463 1584 1.3E-42 T 15-10-2018 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Gene3D G3DSA:3.40.50.12740 1196 1317 1.7E-25 T 15-10-2018 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Gene3D G3DSA:3.30.565.10 969 1142 3.1E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SUPERFAMILY SSF47384 890 971 2.35E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 Gene3D G3DSA:1.20.120.1530 498 635 1.4E-9 T 15-10-2018 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SMART SM00388 902 970 1.3E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SMART SM00448 1196 1306 2.9E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1951 01f11fcfec130c3c4b68a61c16e41d39 1584 SMART SM00448 1464 1578 2.4E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0558 c93210cbbad414dc9512f0f8804bb8a1 301 PIRSF PIRSF000728 13 297 3.4E-105 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 THII_0558 c93210cbbad414dc9512f0f8804bb8a1 301 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 1.8E-6 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 THII_0558 c93210cbbad414dc9512f0f8804bb8a1 301 PRINTS PR00474 Glutamate 5-kinase family signature 197 224 1.8E-6 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 THII_0558 c93210cbbad414dc9512f0f8804bb8a1 301 PRINTS PR00474 Glutamate 5-kinase family signature 247 267 1.8E-6 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 THII_0558 c93210cbbad414dc9512f0f8804bb8a1 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 272 2.1E-76 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 THII_0558 c93210cbbad414dc9512f0f8804bb8a1 301 SUPERFAMILY SSF53633 8 297 4.84E-93 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily THII_0558 c93210cbbad414dc9512f0f8804bb8a1 301 Gene3D G3DSA:3.40.1160.10 3 299 6.3E-99 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily THII_0558 c93210cbbad414dc9512f0f8804bb8a1 301 Pfam PF00696 Amino acid kinase family 28 274 3.8E-43 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 THII_0558 c93210cbbad414dc9512f0f8804bb8a1 301 Hamap MF_00082 Acetylglutamate kinase [argB]. 27 290 50.362 T 15-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 THII_2483 249c7558aa8c304a0920aa8f8bac05d3 81 Gene3D G3DSA:3.30.2310.20 3 80 3.1E-18 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2483 249c7558aa8c304a0920aa8f8bac05d3 81 SUPERFAMILY SSF143011 14 77 3.53E-16 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2483 249c7558aa8c304a0920aa8f8bac05d3 81 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 16 79 3.6E-11 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family THII_2970 011c1dce276983cd65e7b49dba4fb5c0 574 SUPERFAMILY SSF53300 397 557 2.09E-27 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_2970 011c1dce276983cd65e7b49dba4fb5c0 574 SUPERFAMILY SSF53850 63 355 1.56E-14 T 15-10-2018 THII_2970 011c1dce276983cd65e7b49dba4fb5c0 574 Gene3D G3DSA:3.40.190.10 171 303 1.0E-9 T 15-10-2018 THII_2970 011c1dce276983cd65e7b49dba4fb5c0 574 Pfam PF00092 von Willebrand factor type A domain 398 557 9.1E-18 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_2970 011c1dce276983cd65e7b49dba4fb5c0 574 Gene3D G3DSA:3.40.190.10 62 355 1.0E-9 T 15-10-2018 THII_2970 011c1dce276983cd65e7b49dba4fb5c0 574 Pfam PF13531 Bacterial extracellular solute-binding protein 59 348 7.3E-23 T 15-10-2018 THII_2970 011c1dce276983cd65e7b49dba4fb5c0 574 Gene3D G3DSA:3.40.50.410 396 571 1.3E-32 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_2970 011c1dce276983cd65e7b49dba4fb5c0 574 SMART SM00327 396 568 4.7E-17 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 Gene3D G3DSA:3.90.105.10 33 183 3.0E-140 T 15-10-2018 THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 SMART SM00852 189 326 4.4E-43 T 15-10-2018 IPR001453 MoaB/Mog domain THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 Gene3D G3DSA:2.40.340.10 336 406 3.0E-140 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 Gene3D G3DSA:2.170.190.11 57 150 3.0E-140 T 15-10-2018 THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 SUPERFAMILY SSF63867 335 414 4.97E-24 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 322 2.5E-33 T 15-10-2018 IPR001453 MoaB/Mog domain THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 SUPERFAMILY SSF63882 13 184 1.06E-50 T 15-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 262 295 - T 15-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 Pfam PF03453 MoeA N-terminal region (domain I and II) 15 176 1.0E-39 T 15-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 Gene3D G3DSA:3.40.980.10 184 335 3.0E-140 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 Pfam PF00994 Probable molybdopterin binding domain 191 325 4.9E-30 T 15-10-2018 IPR001453 MoaB/Mog domain THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 Pfam PF03454 MoeA C-terminal region (domain IV) 340 411 1.4E-19 T 15-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_2721 0e7852d121ababa8f7796a1cc4e27dc2 415 SUPERFAMILY SSF53218 186 331 1.44E-45 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily THII_0728 68028515bc48ce12f68b554585a27064 44 Pfam PF00468 Ribosomal protein L34 1 44 1.6E-23 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0728 68028515bc48ce12f68b554585a27064 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 25 1.0E-5 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0728 68028515bc48ce12f68b554585a27064 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.925 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0728 68028515bc48ce12f68b554585a27064 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 15-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0728 68028515bc48ce12f68b554585a27064 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 7.6E-25 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1401 e683d41940bbf642ee187d8eef13df2f 364 SUPERFAMILY SSF56014 266 355 3.27E-15 T 15-10-2018 THII_1401 e683d41940bbf642ee187d8eef13df2f 364 SUPERFAMILY SSF51717 16 207 2.04E-9 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_1401 e683d41940bbf642ee187d8eef13df2f 364 Gene3D G3DSA:3.20.20.20 3 261 1.9E-104 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_1401 e683d41940bbf642ee187d8eef13df2f 364 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 7.9E-134 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 THII_1401 e683d41940bbf642ee187d8eef13df2f 364 Gene3D G3DSA:3.30.413.10 262 361 2.3E-30 T 15-10-2018 THII_1401 e683d41940bbf642ee187d8eef13df2f 364 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 34.733 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 THII_1401 e683d41940bbf642ee187d8eef13df2f 364 Pfam PF04551 GcpE protein 13 353 1.2E-135 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 THII_1401 e683d41940bbf642ee187d8eef13df2f 364 PIRSF PIRSF004640 2 362 1.6E-149 T 15-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 THII_2912 42d895b33f80f385e41d38d9e2040332 836 Gene3D G3DSA:3.30.300.10 12 121 6.2E-41 T 15-10-2018 THII_2912 42d895b33f80f385e41d38d9e2040332 836 Gene3D G3DSA:3.10.28.10 399 587 6.5E-33 T 15-10-2018 IPR027434 Homing endonuclease THII_2912 42d895b33f80f385e41d38d9e2040332 836 SUPERFAMILY SSF55973 234 265 1.69E-13 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 THII_2912 42d895b33f80f385e41d38d9e2040332 836 Gene3D G3DSA:2.170.16.10 264 398 1.0E-12 T 15-10-2018 THII_2912 42d895b33f80f385e41d38d9e2040332 836 SUPERFAMILY SSF55973 715 833 3.85E-45 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 THII_2912 42d895b33f80f385e41d38d9e2040332 836 SUPERFAMILY SSF55608 473 592 8.32E-20 T 15-10-2018 IPR027434 Homing endonuclease THII_2912 42d895b33f80f385e41d38d9e2040332 836 Gene3D G3DSA:3.30.300.10 712 833 3.8E-51 T 15-10-2018 THII_2912 42d895b33f80f385e41d38d9e2040332 836 Gene3D G3DSA:3.30.300.10 122 234 1.9E-47 T 15-10-2018 THII_2912 42d895b33f80f385e41d38d9e2040332 836 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 5.1E-44 T 15-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 THII_2912 42d895b33f80f385e41d38d9e2040332 836 PRINTS PR00379 Intein signature 399 411 2.8E-22 T 15-10-2018 IPR006142 Intein GO:0016539 THII_2912 42d895b33f80f385e41d38d9e2040332 836 PRINTS PR00379 Intein signature 709 718 2.8E-22 T 15-10-2018 IPR006142 Intein GO:0016539 THII_2912 42d895b33f80f385e41d38d9e2040332 836 PRINTS PR00379 Intein signature 490 502 2.8E-22 T 15-10-2018 IPR006142 Intein GO:0016539 THII_2912 42d895b33f80f385e41d38d9e2040332 836 PRINTS PR00379 Intein signature 523 538 2.8E-22 T 15-10-2018 IPR006142 Intein GO:0016539 THII_2912 42d895b33f80f385e41d38d9e2040332 836 PRINTS PR00379 Intein signature 691 708 2.8E-22 T 15-10-2018 IPR006142 Intein GO:0016539 THII_2912 42d895b33f80f385e41d38d9e2040332 836 PRINTS PR00379 Intein signature 322 335 2.8E-22 T 15-10-2018 IPR006142 Intein GO:0016539 THII_2912 42d895b33f80f385e41d38d9e2040332 836 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 15-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 THII_2912 42d895b33f80f385e41d38d9e2040332 836 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 693 715 1.7E-6 T 15-10-2018 IPR030934 Intein C-terminal splicing region THII_2912 42d895b33f80f385e41d38d9e2040332 836 SUPERFAMILY SSF55973 5 110 8.24E-46 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 THII_2912 42d895b33f80f385e41d38d9e2040332 836 Pfam PF14528 LAGLIDADG-like domain 489 582 1.4E-18 T 15-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 THII_2912 42d895b33f80f385e41d38d9e2040332 836 Gene3D G3DSA:2.170.16.10 640 711 4.7E-5 T 15-10-2018 THII_2912 42d895b33f80f385e41d38d9e2040332 836 SUPERFAMILY SSF51294 265 714 1.0E-23 T 15-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_2912 42d895b33f80f385e41d38d9e2040332 836 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 265 6.0E-129 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 THII_2912 42d895b33f80f385e41d38d9e2040332 836 Pfam PF14890 Intein splicing domain 315 714 2.1E-14 T 15-10-2018 THII_2912 42d895b33f80f385e41d38d9e2040332 836 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 101 5.2E-43 T 15-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 THII_2912 42d895b33f80f385e41d38d9e2040332 836 SUPERFAMILY SSF55973 112 233 1.37E-50 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 THII_2912 42d895b33f80f385e41d38d9e2040332 836 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 265 6.7E-13 T 15-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 THII_2912 42d895b33f80f385e41d38d9e2040332 836 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 715 823 2.0E-44 T 15-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 THII_3633 6907ca6dd0e6188654566c8221d5e493 193 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 188 3.9E-57 T 15-10-2018 IPR006286 Deglycase PfpI THII_3633 6907ca6dd0e6188654566c8221d5e493 193 SUPERFAMILY SSF52317 4 188 6.53E-52 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_3633 6907ca6dd0e6188654566c8221d5e493 193 Gene3D G3DSA:3.40.50.880 2 192 3.2E-54 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_3633 6907ca6dd0e6188654566c8221d5e493 193 Pfam PF01965 DJ-1/PfpI family 4 185 1.2E-50 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SUPERFAMILY SSF55785 580 708 7.89E-29 T 15-10-2018 IPR035965 PAS domain superfamily THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00387 972 1089 5.3E-38 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00091 341 407 9.5E-5 T 15-10-2018 IPR000014 PAS domain THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00091 467 535 6.8 T 15-10-2018 IPR000014 PAS domain THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00091 595 661 8.2E-9 T 15-10-2018 IPR000014 PAS domain THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00091 722 790 140.0 T 15-10-2018 IPR000014 PAS domain THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00091 220 286 8.1E-4 T 15-10-2018 IPR000014 PAS domain THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SUPERFAMILY SSF55785 215 331 3.59E-16 T 15-10-2018 IPR035965 PAS domain superfamily THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SUPERFAMILY SSF55785 352 464 8.98E-14 T 15-10-2018 IPR035965 PAS domain superfamily THII_1365 98823f1f405ae3219c25db1123c1949f 1342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1032 1042 3.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1049 1067 3.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1014 1028 3.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1073 1086 3.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 591 717 3.4E-30 T 15-10-2018 IPR000014 PAS domain THII_1365 98823f1f405ae3219c25db1123c1949f 1342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 492 590 5.6E-8 T 15-10-2018 IPR000014 PAS domain THII_1365 98823f1f405ae3219c25db1123c1949f 1342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 337 462 1.9E-11 T 15-10-2018 IPR000014 PAS domain THII_1365 98823f1f405ae3219c25db1123c1949f 1342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 217 340 4.1E-13 T 15-10-2018 IPR000014 PAS domain THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Gene3D G3DSA:3.30.450.20 467 536 2.1E-22 T 15-10-2018 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Gene3D G3DSA:3.30.450.20 718 790 1.6E-19 T 15-10-2018 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Pfam PF08447 PAS fold 492 577 6.2E-19 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Pfam PF08447 PAS fold 618 701 3.3E-12 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Pfam PF08447 PAS fold 747 834 6.6E-12 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00086 798 840 1.2E-7 T 15-10-2018 IPR001610 PAC motif THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00086 541 583 5.3E-5 T 15-10-2018 IPR001610 PAC motif THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00086 413 455 23.0 T 15-10-2018 IPR001610 PAC motif THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00086 668 710 1.4E-10 T 15-10-2018 IPR001610 PAC motif THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SUPERFAMILY SSF55785 476 586 6.98E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Pfam PF00072 Response regulator receiver domain 1116 1226 2.4E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SUPERFAMILY SSF55874 914 1085 5.63E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Gene3D G3DSA:1.10.287.130 839 923 2.2E-27 T 15-10-2018 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Gene3D G3DSA:2.10.70.100 537 583 3.2E-14 T 15-10-2018 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Gene3D G3DSA:2.10.70.100 797 838 4.7E-12 T 15-10-2018 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Gene3D G3DSA:3.30.450.20 584 708 7.2E-28 T 15-10-2018 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SUPERFAMILY SSF47384 846 926 4.71E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 973 1086 1.1E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Gene3D G3DSA:3.40.50.12740 1114 1284 2.5E-33 T 15-10-2018 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SUPERFAMILY SSF52172 1113 1235 3.42E-29 T 15-10-2018 IPR011006 CheY-like superfamily THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Gene3D G3DSA:3.30.450.20 349 466 2.0E-14 T 15-10-2018 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Gene3D G3DSA:3.30.450.20 214 345 2.0E-22 T 15-10-2018 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Pfam PF00989 PAS fold 343 452 4.4E-6 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SUPERFAMILY SSF55785 707 838 8.03E-19 T 15-10-2018 IPR035965 PAS domain superfamily THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Pfam PF00512 His Kinase A (phospho-acceptor) domain 860 925 3.6E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Pfam PF08448 PAS fold 226 334 1.3E-14 T 15-10-2018 IPR013656 PAS fold-4 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 Gene3D G3DSA:3.30.565.10 924 1088 4.3E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00448 1114 1226 2.2E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1365 98823f1f405ae3219c25db1123c1949f 1342 SMART SM00388 860 925 7.7E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3584 fd9a0f52871b57973f83ddf220fed1a9 80 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 4 77 2.7E-36 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 THII_3584 fd9a0f52871b57973f83ddf220fed1a9 80 Pfam PF00550 Phosphopantetheine attachment site 8 75 8.7E-17 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_3584 fd9a0f52871b57973f83ddf220fed1a9 80 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 43 79 2.0E-12 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 THII_3584 fd9a0f52871b57973f83ddf220fed1a9 80 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 22.747 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 THII_3584 fd9a0f52871b57973f83ddf220fed1a9 80 SUPERFAMILY SSF47336 2 79 7.2E-24 T 15-10-2018 IPR036736 ACP-like superfamily THII_3584 fd9a0f52871b57973f83ddf220fed1a9 80 Gene3D G3DSA:1.10.1200.10 1 77 2.6E-30 T 15-10-2018 IPR036736 ACP-like superfamily THII_3584 fd9a0f52871b57973f83ddf220fed1a9 80 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site THII_3793 4f5c6d69c026b3df6f831d1e42a9bcea 334 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 302 2.9E-51 T 15-10-2018 IPR000160 GGDEF domain THII_3793 4f5c6d69c026b3df6f831d1e42a9bcea 334 SUPERFAMILY SSF55073 142 300 5.49E-49 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3793 4f5c6d69c026b3df6f831d1e42a9bcea 334 Gene3D G3DSA:3.40.50.2300 2 126 2.1E-27 T 15-10-2018 THII_3793 4f5c6d69c026b3df6f831d1e42a9bcea 334 SMART SM00448 1 106 6.7E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3793 4f5c6d69c026b3df6f831d1e42a9bcea 334 Pfam PF00990 Diguanylate cyclase, GGDEF domain 137 298 4.5E-52 T 15-10-2018 IPR000160 GGDEF domain THII_3793 4f5c6d69c026b3df6f831d1e42a9bcea 334 Gene3D G3DSA:3.30.70.270 127 302 2.2E-59 T 15-10-2018 THII_3793 4f5c6d69c026b3df6f831d1e42a9bcea 334 SUPERFAMILY SSF52172 7 143 6.12E-31 T 15-10-2018 IPR011006 CheY-like superfamily THII_3793 4f5c6d69c026b3df6f831d1e42a9bcea 334 Pfam PF00072 Response regulator receiver domain 7 106 4.0E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3793 4f5c6d69c026b3df6f831d1e42a9bcea 334 SMART SM00267 126 302 3.8E-69 T 15-10-2018 IPR000160 GGDEF domain THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 SUPERFAMILY SSF56112 3 265 3.14E-55 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 Gene3D G3DSA:1.10.510.10 88 286 3.1E-36 T 15-10-2018 THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 SUPERFAMILY SSF52540 297 579 5.0E-19 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 SUPERFAMILY SSF55781 1315 1493 5.45E-25 T 15-10-2018 THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 Pfam PF00069 Protein kinase domain 9 257 7.3E-34 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 Gene3D G3DSA:3.30.200.20 3 87 2.0E-5 T 15-10-2018 THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1655 1821 8.1E-50 T 15-10-2018 IPR000160 GGDEF domain THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 Gene3D G3DSA:3.30.450.20 1480 1612 2.0E-15 T 15-10-2018 THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 Gene3D G3DSA:3.30.70.270 1644 1822 8.3E-58 T 15-10-2018 THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 SUPERFAMILY SSF55785 1476 1604 3.43E-12 T 15-10-2018 IPR035965 PAS domain superfamily THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1658 1818 2.2E-53 T 15-10-2018 IPR000160 GGDEF domain THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 Pfam PF01590 GAF domain 1332 1472 1.4E-12 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1483 1610 1.4E-8 T 15-10-2018 IPR000014 PAS domain THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 SMART SM00267 1647 1823 2.3E-69 T 15-10-2018 IPR000160 GGDEF domain THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 Gene3D G3DSA:3.30.450.40 1312 1479 7.7E-31 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 Pfam PF13191 AAA ATPase domain 300 492 6.0E-45 T 15-10-2018 THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 SUPERFAMILY SSF55073 1663 1821 8.63E-48 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 Gene3D G3DSA:3.40.50.300 293 503 2.7E-12 T 15-10-2018 THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 SMART SM00091 1486 1556 0.0029 T 15-10-2018 IPR000014 PAS domain THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 SMART SM00065 1330 1482 1.7E-16 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_3042 7cd335e5c3a592c9bf0760d057f6ea65 1823 Pfam PF08448 PAS fold 1492 1608 2.7E-5 T 15-10-2018 IPR013656 PAS fold-4 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SUPERFAMILY SSF55781 332 506 4.8E-24 T 15-10-2018 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00388 920 985 9.0E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SUPERFAMILY SSF55785 228 339 7.5E-17 T 15-10-2018 IPR035965 PAS domain superfamily THII_0774 2a54e538a905a4a7a837334eebf48954 1396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1073 1087 1.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1091 1101 1.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1108 1126 1.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1132 1145 1.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Gene3D G3DSA:1.10.287.130 896 983 3.3E-29 T 15-10-2018 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Pfam PF13185 GAF domain 365 506 5.5E-18 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SUPERFAMILY SSF55874 974 1144 1.03E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00387 1032 1148 1.3E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Gene3D G3DSA:3.30.450.20 775 895 6.5E-27 T 15-10-2018 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Pfam PF13426 PAS domain 671 772 3.0E-8 T 15-10-2018 IPR000014 PAS domain THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Pfam PF13426 PAS domain 541 647 5.8E-12 T 15-10-2018 IPR000014 PAS domain THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00448 1172 1282 2.7E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SUPERFAMILY SSF47384 905 986 1.43E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Pfam PF08448 PAS fold 228 339 2.9E-16 T 15-10-2018 IPR013656 PAS fold-4 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00086 733 773 1.3E-5 T 15-10-2018 IPR001610 PAC motif THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00086 295 337 180.0 T 15-10-2018 IPR001610 PAC motif THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00086 608 648 0.88 T 15-10-2018 IPR001610 PAC motif THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00086 858 900 0.002 T 15-10-2018 IPR001610 PAC motif THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Gene3D G3DSA:3.30.565.10 984 1147 1.3E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Gene3D G3DSA:3.30.450.20 646 770 2.6E-29 T 15-10-2018 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Pfam PF00512 His Kinase A (phospho-acceptor) domain 920 985 4.7E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SUPERFAMILY SSF55785 645 771 5.23E-26 T 15-10-2018 IPR035965 PAS domain superfamily THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Gene3D G3DSA:3.30.450.20 215 346 5.3E-23 T 15-10-2018 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SUPERFAMILY SSF55785 770 898 6.98E-22 T 15-10-2018 IPR035965 PAS domain superfamily THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00065 339 521 0.0019 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Gene3D G3DSA:3.30.450.20 517 645 9.3E-22 T 15-10-2018 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1033 1145 2.1E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Pfam PF00072 Response regulator receiver domain 1174 1279 1.7E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00091 531 599 4.1E-5 T 15-10-2018 IPR000014 PAS domain THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00091 660 725 1.3E-6 T 15-10-2018 IPR000014 PAS domain THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00091 785 852 2.7E-4 T 15-10-2018 IPR000014 PAS domain THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SMART SM00091 222 289 1.2 T 15-10-2018 IPR000014 PAS domain THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SUPERFAMILY SSF55785 518 646 5.58E-22 T 15-10-2018 IPR035965 PAS domain superfamily THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Gene3D G3DSA:3.40.50.12740 1171 1339 1.4E-34 T 15-10-2018 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 SUPERFAMILY SSF52172 1170 1289 1.85E-29 T 15-10-2018 IPR011006 CheY-like superfamily THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Pfam PF08447 PAS fold 807 894 1.3E-17 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_0774 2a54e538a905a4a7a837334eebf48954 1396 Gene3D G3DSA:3.30.450.40 347 509 8.9E-25 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_0774 2a54e538a905a4a7a837334eebf48954 1396 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 527 655 4.7E-17 T 15-10-2018 IPR000014 PAS domain THII_0774 2a54e538a905a4a7a837334eebf48954 1396 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 781 906 2.7E-14 T 15-10-2018 IPR000014 PAS domain THII_0774 2a54e538a905a4a7a837334eebf48954 1396 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 656 778 7.1E-26 T 15-10-2018 IPR000014 PAS domain THII_0774 2a54e538a905a4a7a837334eebf48954 1396 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 219 344 7.4E-12 T 15-10-2018 IPR000014 PAS domain THII_2879 e91ebdb4dee8dd4c55ab870d811462fe 174 Gene3D G3DSA:3.30.70.3460 32 170 1.3E-36 T 15-10-2018 THII_0523 cbc41a623c83eaf2eb0f628e370bf125 169 Gene3D G3DSA:3.40.30.10 86 167 1.5E-29 T 15-10-2018 THII_0523 cbc41a623c83eaf2eb0f628e370bf125 169 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 126 144 - T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0523 cbc41a623c83eaf2eb0f628e370bf125 169 PIRSF PIRSF000216 2 169 9.6E-64 T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0523 cbc41a623c83eaf2eb0f628e370bf125 169 Gene3D G3DSA:1.10.10.1590 13 85 4.1E-26 T 15-10-2018 THII_0523 cbc41a623c83eaf2eb0f628e370bf125 169 SUPERFAMILY SSF52833 15 168 3.35E-55 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_0523 cbc41a623c83eaf2eb0f628e370bf125 169 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 169 4.6E-62 T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0523 cbc41a623c83eaf2eb0f628e370bf125 169 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 168 1.1E-57 T 15-10-2018 THII_3920 a668f69fc678d6a0e3d92e7eb75550b6 83 Gene3D G3DSA:1.10.10.10 9 75 2.5E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3920 a668f69fc678d6a0e3d92e7eb75550b6 83 SUPERFAMILY SSF46689 4 74 5.55E-21 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3920 a668f69fc678d6a0e3d92e7eb75550b6 83 Pfam PF04255 Protein of unknown function (DUF433) 10 65 2.0E-22 T 15-10-2018 IPR007367 Protein of unknown function DUF433 THII_0762 2599630a3cbc869384f00bc3c123ee1b 600 Gene3D G3DSA:1.20.1560.10 1 323 1.9E-76 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 THII_0762 2599630a3cbc869384f00bc3c123ee1b 600 SUPERFAMILY SSF52540 337 579 2.44E-89 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0762 2599630a3cbc869384f00bc3c123ee1b 600 Gene3D G3DSA:3.40.50.300 330 582 1.3E-89 T 15-10-2018 THII_0762 2599630a3cbc869384f00bc3c123ee1b 600 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 7 580 3.2E-210 T 15-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 THII_0762 2599630a3cbc869384f00bc3c123ee1b 600 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_0762 2599630a3cbc869384f00bc3c123ee1b 600 Pfam PF00664 ABC transporter transmembrane region 24 292 8.9E-54 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 THII_0762 2599630a3cbc869384f00bc3c123ee1b 600 SUPERFAMILY SSF90123 9 318 1.7E-68 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 THII_0762 2599630a3cbc869384f00bc3c123ee1b 600 SMART SM00382 368 555 1.3E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0762 2599630a3cbc869384f00bc3c123ee1b 600 Pfam PF00005 ABC transporter 359 509 7.0E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2256 fb67121b2dd5aa274b07ae55c9f0f54a 133 SUPERFAMILY SSF53041 4 126 1.96E-12 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 THII_2256 fb67121b2dd5aa274b07ae55c9f0f54a 133 SMART SM00857 4 132 2.3E-7 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 THII_2256 fb67121b2dd5aa274b07ae55c9f0f54a 133 Pfam PF00239 Resolvase, N terminal domain 4 122 1.4E-13 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 THII_2256 fb67121b2dd5aa274b07ae55c9f0f54a 133 Gene3D G3DSA:3.40.50.1390 2 132 6.1E-18 T 15-10-2018 THII_1368 3ba31ab102ebbcb93cad0d254399238f 296 Pfam PF00348 Polyprenyl synthetase 31 270 5.6E-59 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 THII_1368 3ba31ab102ebbcb93cad0d254399238f 296 SUPERFAMILY SSF48576 1 289 1.01E-88 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily THII_1368 3ba31ab102ebbcb93cad0d254399238f 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site THII_1368 3ba31ab102ebbcb93cad0d254399238f 296 Gene3D G3DSA:1.10.600.10 2 296 2.1E-98 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily THII_1368 3ba31ab102ebbcb93cad0d254399238f 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site THII_2040 ddf34c067280841a82ee0842c8bde1ee 322 SUPERFAMILY SSF141523 190 258 9.68E-6 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like THII_2040 ddf34c067280841a82ee0842c8bde1ee 322 Pfam PF03734 L,D-transpeptidase catalytic domain 179 263 5.5E-5 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 THII_2040 ddf34c067280841a82ee0842c8bde1ee 322 Gene3D G3DSA:2.40.440.10 140 266 1.8E-9 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like THII_2706 99960bba1378aef5627cd667d16fcaba 177 SUPERFAMILY SSF110849 18 95 9.59E-5 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily THII_1430 c5db668a93bb4fafed20a0d4b86be87a 330 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 5 319 2.9E-104 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 THII_1430 c5db668a93bb4fafed20a0d4b86be87a 330 Gene3D G3DSA:3.30.1330.10 2 145 2.1E-45 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily THII_1430 c5db668a93bb4fafed20a0d4b86be87a 330 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 139 1.9E-23 T 15-10-2018 IPR016188 PurM-like, N-terminal domain THII_1430 c5db668a93bb4fafed20a0d4b86be87a 330 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 320 27.345 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 THII_1430 c5db668a93bb4fafed20a0d4b86be87a 330 SUPERFAMILY SSF55326 4 139 2.79E-35 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily THII_1430 c5db668a93bb4fafed20a0d4b86be87a 330 PIRSF PIRSF005303 1 320 2.4E-84 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 THII_1430 c5db668a93bb4fafed20a0d4b86be87a 330 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 294 4.5E-9 T 15-10-2018 IPR010918 PurM-like, C-terminal domain THII_1430 c5db668a93bb4fafed20a0d4b86be87a 330 SUPERFAMILY SSF56042 145 302 4.34E-35 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily THII_1430 c5db668a93bb4fafed20a0d4b86be87a 330 Gene3D G3DSA:3.90.650.10 147 320 6.9E-52 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily THII_1032 33e912e45eea77d31a7dd21cd6b25aad 340 Gene3D G3DSA:3.40.50.720 7 334 6.2E-147 T 15-10-2018 THII_1032 33e912e45eea77d31a7dd21cd6b25aad 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 322 1.7E-59 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 THII_1032 33e912e45eea77d31a7dd21cd6b25aad 340 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 338 9.3E-136 T 15-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 THII_1032 33e912e45eea77d31a7dd21cd6b25aad 340 Gene3D G3DSA:3.30.360.10 130 319 6.2E-147 T 15-10-2018 THII_1032 33e912e45eea77d31a7dd21cd6b25aad 340 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 336 37.357 T 15-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 THII_1032 33e912e45eea77d31a7dd21cd6b25aad 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 120 9.5E-32 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 THII_1032 33e912e45eea77d31a7dd21cd6b25aad 340 PIRSF PIRSF000148 4 340 8.9E-133 T 15-10-2018 THII_1032 33e912e45eea77d31a7dd21cd6b25aad 340 SUPERFAMILY SSF51735 6 159 1.28E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1032 33e912e45eea77d31a7dd21cd6b25aad 340 SMART SM00859 6 121 1.2E-42 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 THII_1032 33e912e45eea77d31a7dd21cd6b25aad 340 SUPERFAMILY SSF55347 131 323 2.5E-77 T 15-10-2018 THII_3722 dec90e8b78162362e308d76d44517bd8 588 SUPERFAMILY SSF55785 78 194 1.09E-5 T 15-10-2018 IPR035965 PAS domain superfamily THII_3722 dec90e8b78162362e308d76d44517bd8 588 SUPERFAMILY SSF47384 193 283 1.18E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3722 dec90e8b78162362e308d76d44517bd8 588 Gene3D G3DSA:3.30.450.20 59 183 3.9E-7 T 15-10-2018 THII_3722 dec90e8b78162362e308d76d44517bd8 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 9.3E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3722 dec90e8b78162362e308d76d44517bd8 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 9.3E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3722 dec90e8b78162362e308d76d44517bd8 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 9.3E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3722 dec90e8b78162362e308d76d44517bd8 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 9.3E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3722 dec90e8b78162362e308d76d44517bd8 588 SUPERFAMILY SSF55874 271 438 7.86E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3722 dec90e8b78162362e308d76d44517bd8 588 Gene3D G3DSA:3.30.565.10 281 440 1.3E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3722 dec90e8b78162362e308d76d44517bd8 588 SUPERFAMILY SSF52172 452 578 8.11E-32 T 15-10-2018 IPR011006 CheY-like superfamily THII_3722 dec90e8b78162362e308d76d44517bd8 588 Pfam PF00512 His Kinase A (phospho-acceptor) domain 207 282 1.6E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3722 dec90e8b78162362e308d76d44517bd8 588 SMART SM00387 329 440 9.2E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3722 dec90e8b78162362e308d76d44517bd8 588 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 438 3.4E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3722 dec90e8b78162362e308d76d44517bd8 588 SMART SM00448 457 571 9.3E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3722 dec90e8b78162362e308d76d44517bd8 588 Pfam PF00072 Response regulator receiver domain 460 571 1.1E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3722 dec90e8b78162362e308d76d44517bd8 588 Gene3D G3DSA:1.10.287.130 184 280 2.9E-25 T 15-10-2018 THII_3722 dec90e8b78162362e308d76d44517bd8 588 SMART SM00388 207 282 4.3E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3722 dec90e8b78162362e308d76d44517bd8 588 Gene3D G3DSA:3.40.50.12740 458 587 5.0E-33 T 15-10-2018 THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SUPERFAMILY SSF49373 332 427 1.53E-15 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SUPERFAMILY SSF49373 542 623 1.49E-11 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SUPERFAMILY SSF49373 726 818 4.12E-10 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SMART SM00634 825 914 0.24 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SMART SM00634 48 138 0.0013 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SMART SM00634 234 334 0.044 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SMART SM00634 630 721 0.24 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SMART SM00634 726 816 1.5E-7 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SMART SM00634 336 426 0.0097 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SMART SM00634 532 621 0.014 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Gene3D G3DSA:2.60.40.10 927 1030 3.3E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Gene3D G3DSA:2.60.40.10 823 916 1.3E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SUPERFAMILY SSF49373 147 235 1.96E-9 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SUPERFAMILY SSF49373 446 530 1.92E-5 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SUPERFAMILY SSF49373 44 135 1.18E-12 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SUPERFAMILY SSF49373 245 324 2.15E-9 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Pfam PF09134 Invasin, domain 3 339 429 2.0E-7 T 15-10-2018 IPR015217 Invasin, domain 3 THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Gene3D G3DSA:2.60.40.10 242 326 7.3E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Gene3D G3DSA:2.60.40.10 629 724 1.4E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Gene3D G3DSA:2.60.40.10 725 819 2.6E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Gene3D G3DSA:2.60.40.10 144 234 5.6E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Gene3D G3DSA:2.60.40.10 331 430 1.7E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Gene3D G3DSA:2.60.40.10 432 530 3.0E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Gene3D G3DSA:2.60.40.10 538 623 2.0E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Gene3D G3DSA:2.60.40.10 41 142 4.6E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SUPERFAMILY SSF49373 632 726 8.63E-10 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 Pfam PF02369 Bacterial Ig-like domain (group 1) 541 598 3.4E-9 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3044 e0cf9403af3d0a54c332f40fb6acc356 1372 SUPERFAMILY SSF49373 839 917 3.14E-9 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_2728 397474a1559d1ae8003b5e2d88fa1792 233 SUPERFAMILY SSF56808 6 225 1.57E-82 T 15-10-2018 IPR023674 Ribosomal protein L1-like THII_2728 397474a1559d1ae8003b5e2d88fa1792 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.124 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 THII_2728 397474a1559d1ae8003b5e2d88fa1792 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 15-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_2728 397474a1559d1ae8003b5e2d88fa1792 233 Gene3D G3DSA:3.40.50.790 68 159 2.2E-81 T 15-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich THII_2728 397474a1559d1ae8003b5e2d88fa1792 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 3.4E-104 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 THII_2728 397474a1559d1ae8003b5e2d88fa1792 233 Gene3D G3DSA:3.30.190.20 21 225 2.2E-81 T 15-10-2018 THII_2728 397474a1559d1ae8003b5e2d88fa1792 233 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 2.0E-53 T 15-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein THII_2728 397474a1559d1ae8003b5e2d88fa1792 233 PIRSF PIRSF002155 1 227 6.3E-77 T 15-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_2387 4788fd0eb348052497512135659a245a 639 Gene3D G3DSA:2.160.20.10 417 591 2.2E-8 T 15-10-2018 IPR012334 Pectin lyase fold THII_2387 4788fd0eb348052497512135659a245a 639 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 60 137 1.4E-16 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_2387 4788fd0eb348052497512135659a245a 639 SMART SM00912 29 143 4.3E-7 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_2387 4788fd0eb348052497512135659a245a 639 Pfam PF05860 haemagglutination activity domain 51 137 6.2E-20 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_2387 4788fd0eb348052497512135659a245a 639 SUPERFAMILY SSF51126 34 336 8.16E-35 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_2387 4788fd0eb348052497512135659a245a 639 Gene3D G3DSA:2.160.20.10 27 307 5.0E-44 T 15-10-2018 IPR012334 Pectin lyase fold THII_0791 fee3a0258e78d78311eb530b3da33613 164 SUPERFAMILY SSF56436 59 141 6.4E-5 T 15-10-2018 IPR016187 C-type lectin fold THII_1741 d450645ec3c4a2c32b0e5f590b72cdf9 411 PIRSF PIRSF006205 1 408 1.7E-151 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 THII_1741 d450645ec3c4a2c32b0e5f590b72cdf9 411 Gene3D G3DSA:3.40.50.720 1 150 5.4E-49 T 15-10-2018 THII_1741 d450645ec3c4a2c32b0e5f590b72cdf9 411 SUPERFAMILY SSF55347 126 283 1.73E-58 T 15-10-2018 THII_1741 d450645ec3c4a2c32b0e5f590b72cdf9 411 SUPERFAMILY SSF51735 2 150 3.49E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1741 d450645ec3c4a2c32b0e5f590b72cdf9 411 SUPERFAMILY SSF69055 310 404 4.45E-30 T 15-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 THII_1741 d450645ec3c4a2c32b0e5f590b72cdf9 411 Pfam PF13288 DXP reductoisomerase C-terminal domain 280 396 3.5E-40 T 15-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 THII_1741 d450645ec3c4a2c32b0e5f590b72cdf9 411 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 3.5E-45 T 15-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 THII_1741 d450645ec3c4a2c32b0e5f590b72cdf9 411 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 403 3.5E-152 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 THII_1741 d450645ec3c4a2c32b0e5f590b72cdf9 411 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 401 45.949 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 THII_1741 d450645ec3c4a2c32b0e5f590b72cdf9 411 Gene3D G3DSA:1.10.1740.10 321 406 7.5E-29 T 15-10-2018 THII_1741 d450645ec3c4a2c32b0e5f590b72cdf9 411 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 248 9.6E-38 T 15-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 THII_1173 84c8e68d9fe39c7c73c364c4f16499f9 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 THII_1173 84c8e68d9fe39c7c73c364c4f16499f9 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.0E-13 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1173 84c8e68d9fe39c7c73c364c4f16499f9 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 55.063 T 15-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 THII_1173 84c8e68d9fe39c7c73c364c4f16499f9 273 Gene3D G3DSA:2.160.10.10 88 257 1.4E-56 T 15-10-2018 THII_1173 84c8e68d9fe39c7c73c364c4f16499f9 273 Gene3D G3DSA:1.10.166.10 1 70 1.4E-24 T 15-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 THII_1173 84c8e68d9fe39c7c73c364c4f16499f9 273 SUPERFAMILY SSF51161 2 256 2.63E-74 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_1173 84c8e68d9fe39c7c73c364c4f16499f9 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 3.0E-137 T 15-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 THII_1173 84c8e68d9fe39c7c73c364c4f16499f9 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 69 6.3E-22 T 15-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 THII_1173 84c8e68d9fe39c7c73c364c4f16499f9 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 3.8E-4 T 15-10-2018 IPR001451 Hexapeptide repeat THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SMART SM00174 363 527 1.5E-4 T 15-10-2018 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 118 132 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Gene3D G3DSA:2.130.10.10 134 330 4.5E-55 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SMART SM00175 361 524 3.5E-6 T 15-10-2018 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 35 49 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Pfam PF00400 WD domain, G-beta repeat 68 90 0.021 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Pfam PF00400 WD domain, G-beta repeat 180 215 2.4E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Pfam PF00400 WD domain, G-beta repeat 93 131 9.9E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Pfam PF00400 WD domain, G-beta repeat 12 48 1.9E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Pfam PF00400 WD domain, G-beta repeat 136 172 1.4E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Pfam PF00400 WD domain, G-beta repeat 219 256 4.8E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 PRINTS PR00320 G protein beta WD-40 repeat signature 35 49 6.8E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 PRINTS PR00320 G protein beta WD-40 repeat signature 202 216 6.8E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 PRINTS PR00320 G protein beta WD-40 repeat signature 77 91 6.8E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 PRINTS PR00449 Transforming protein P21 ras signature 361 382 1.7E-7 T 15-10-2018 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 PRINTS PR00449 Transforming protein P21 ras signature 405 427 1.7E-7 T 15-10-2018 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Pfam PF08357 SEFIR domain 894 976 4.5E-7 T 15-10-2018 IPR013568 SEFIR domain THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Gene3D G3DSA:3.40.50.10140 889 1038 4.1E-9 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SUPERFAMILY SSF52200 882 1020 5.49E-5 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 202 216 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Pfam PF00071 Ras family 362 523 8.4E-20 T 15-10-2018 IPR001806 Small GTPase GO:0003924|GO:0005525 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SUPERFAMILY SSF52540 360 526 1.54E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Gene3D G3DSA:3.40.50.300 357 544 6.2E-28 T 15-10-2018 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SUPERFAMILY SSF50978 7 302 7.63E-85 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SMART SM00320 260 303 3.2 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SMART SM00320 176 215 5.6E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SMART SM00320 51 90 0.0027 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SMART SM00320 134 173 1.8E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SMART SM00320 9 48 1.2E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SMART SM00320 218 257 1.6E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 SMART SM00320 92 131 4.6E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2996 a10fb2367b89a5775b3ca953273e9fff 1062 Gene3D G3DSA:2.130.10.10 3 133 1.0E-37 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0314 9ceae6433253f4f4074231bacaaac480 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.985 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 THII_0314 9ceae6433253f4f4074231bacaaac480 396 SUPERFAMILY SSF50465 300 395 9.5E-37 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal THII_0314 9ceae6433253f4f4074231bacaaac480 396 SUPERFAMILY SSF50447 205 303 6.65E-31 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_0314 9ceae6433253f4f4074231bacaaac480 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 6.6E-34 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal THII_0314 9ceae6433253f4f4074231bacaaac480 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.5E-16 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 THII_0314 9ceae6433253f4f4074231bacaaac480 396 Gene3D G3DSA:2.40.30.10 208 336 6.5E-54 T 15-10-2018 THII_0314 9ceae6433253f4f4074231bacaaac480 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 7.2E-58 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0314 9ceae6433253f4f4074231bacaaac480 396 SUPERFAMILY SSF52540 6 221 7.0E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0314 9ceae6433253f4f4074231bacaaac480 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.1E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0314 9ceae6433253f4f4074231bacaaac480 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.1E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0314 9ceae6433253f4f4074231bacaaac480 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.1E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0314 9ceae6433253f4f4074231bacaaac480 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.1E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0314 9ceae6433253f4f4074231bacaaac480 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.1E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_0314 9ceae6433253f4f4074231bacaaac480 396 Gene3D G3DSA:2.40.30.10 340 395 3.9E-29 T 15-10-2018 THII_0314 9ceae6433253f4f4074231bacaaac480 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site THII_0314 9ceae6433253f4f4074231bacaaac480 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 3.7E-15 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_0314 9ceae6433253f4f4074231bacaaac480 396 Gene3D G3DSA:3.40.50.300 1 205 9.3E-69 T 15-10-2018 THII_0314 9ceae6433253f4f4074231bacaaac480 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 396 1.3E-227 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 THII_2443 2f319747d7259d00bdd46a5ce57eb932 209 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 25 182 27.249 T 15-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 THII_2443 2f319747d7259d00bdd46a5ce57eb932 209 Pfam PF03975 CheD chemotactic sensory transduction 72 178 9.3E-30 T 15-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 THII_2443 2f319747d7259d00bdd46a5ce57eb932 209 SUPERFAMILY SSF64438 30 182 4.39E-46 T 15-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic THII_2443 2f319747d7259d00bdd46a5ce57eb932 209 Gene3D G3DSA:3.30.1330.200 28 189 1.0E-48 T 15-10-2018 IPR038592 CheD-like superfamily THII_2396 0cd93add14e366924d1422696cc7be05 430 Gene3D G3DSA:1.10.300.10 102 201 2.9E-102 T 15-10-2018 THII_2396 0cd93add14e366924d1422696cc7be05 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 15-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 THII_2396 0cd93add14e366924d1422696cc7be05 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 203.49 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 THII_2396 0cd93add14e366924d1422696cc7be05 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 8.9E-179 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 THII_2396 0cd93add14e366924d1422696cc7be05 430 SUPERFAMILY SSF52540 4 429 1.17E-171 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2396 0cd93add14e366924d1422696cc7be05 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 15-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 THII_2396 0cd93add14e366924d1422696cc7be05 430 Gene3D G3DSA:3.40.440.10 6 249 2.9E-102 T 15-10-2018 THII_2396 0cd93add14e366924d1422696cc7be05 430 Pfam PF00709 Adenylosuccinate synthetase 5 423 4.4E-177 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 THII_2396 0cd93add14e366924d1422696cc7be05 430 Gene3D G3DSA:3.90.170.10 267 430 2.6E-65 T 15-10-2018 THII_2396 0cd93add14e366924d1422696cc7be05 430 SMART SM00788 4 424 1.8E-280 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 THII_1302 fafd7abd798f8bb4928e9771e489cd6d 173 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 6 168 1.1E-83 T 15-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 THII_1302 fafd7abd798f8bb4928e9771e489cd6d 173 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 10 151 3.0E-36 T 15-10-2018 IPR001453 MoaB/Mog domain THII_1302 fafd7abd798f8bb4928e9771e489cd6d 173 Gene3D G3DSA:3.40.980.10 2 170 7.9E-52 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily THII_1302 fafd7abd798f8bb4928e9771e489cd6d 173 Pfam PF00994 Probable molybdopterin binding domain 13 154 5.6E-33 T 15-10-2018 IPR001453 MoaB/Mog domain THII_1302 fafd7abd798f8bb4928e9771e489cd6d 173 PIRSF PIRSF006443 1 165 9.2E-64 T 15-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 THII_1302 fafd7abd798f8bb4928e9771e489cd6d 173 SUPERFAMILY SSF53218 5 169 4.19E-48 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily THII_1302 fafd7abd798f8bb4928e9771e489cd6d 173 SMART SM00852 13 157 3.1E-28 T 15-10-2018 IPR001453 MoaB/Mog domain THII_3725 959e076acc2472e1d6c3515a3806b01e 788 Pfam PF09371 Tex-like protein N-terminal domain 8 192 4.5E-68 T 15-10-2018 IPR018974 Tex-like protein, N-terminal THII_3725 959e076acc2472e1d6c3515a3806b01e 788 SMART SM00732 328 427 1.1E-35 T 15-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 THII_3725 959e076acc2472e1d6c3515a3806b01e 788 SUPERFAMILY SSF53098 324 472 3.11E-51 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_3725 959e076acc2472e1d6c3515a3806b01e 788 SUPERFAMILY SSF47781 473 560 1.78E-25 T 15-10-2018 IPR010994 RuvA domain 2-like THII_3725 959e076acc2472e1d6c3515a3806b01e 788 Pfam PF00575 S1 RNA binding domain 652 721 3.2E-20 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_3725 959e076acc2472e1d6c3515a3806b01e 788 Gene3D G3DSA:2.40.50.140 634 724 2.4E-27 T 15-10-2018 THII_3725 959e076acc2472e1d6c3515a3806b01e 788 Gene3D G3DSA:1.10.10.650 1 108 4.8E-40 T 15-10-2018 IPR023319 Tex-like protein, HTH domain superfamily THII_3725 959e076acc2472e1d6c3515a3806b01e 788 SUPERFAMILY SSF47781 563 634 9.34E-20 T 15-10-2018 IPR010994 RuvA domain 2-like THII_3725 959e076acc2472e1d6c3515a3806b01e 788 SMART SM00316 652 723 9.6E-23 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_3725 959e076acc2472e1d6c3515a3806b01e 788 Gene3D G3DSA:1.10.3500.10 112 501 6.9E-153 T 15-10-2018 IPR023323 Tex-like domain superfamily THII_3725 959e076acc2472e1d6c3515a3806b01e 788 Pfam PF12836 Helix-hairpin-helix motif 494 558 1.2E-23 T 15-10-2018 THII_3725 959e076acc2472e1d6c3515a3806b01e 788 Pfam PF16921 Tex protein YqgF-like domain 329 454 1.3E-52 T 15-10-2018 IPR032639 Tex protein, YqgF-like domain THII_3725 959e076acc2472e1d6c3515a3806b01e 788 Gene3D G3DSA:1.10.150.310 502 633 5.0E-48 T 15-10-2018 THII_3725 959e076acc2472e1d6c3515a3806b01e 788 SUPERFAMILY SSF50249 641 722 3.51E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_3725 959e076acc2472e1d6c3515a3806b01e 788 SUPERFAMILY SSF158832 2 323 7.32E-112 T 15-10-2018 THII_3725 959e076acc2472e1d6c3515a3806b01e 788 Gene3D G3DSA:3.30.420.140 327 454 6.9E-153 T 15-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 THII_0418 6c22781c03465f2f164a3b327f9ff72d 238 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 238 94.724 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 THII_0418 6c22781c03465f2f164a3b327f9ff72d 238 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 42 221 1.5E-66 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 THII_0418 6c22781c03465f2f164a3b327f9ff72d 238 Gene3D G3DSA:2.30.210.20 8 64 3.4E-25 T 15-10-2018 THII_0418 6c22781c03465f2f164a3b327f9ff72d 238 SUPERFAMILY SSF55729 6 231 7.42E-92 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_0418 6c22781c03465f2f164a3b327f9ff72d 238 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 38 208 7.1E-76 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 THII_0418 6c22781c03465f2f164a3b327f9ff72d 238 Gene3D G3DSA:3.40.630.70 65 236 1.4E-65 T 15-10-2018 THII_3016 82e848c6228dd3aa3fc843fdfac4ba1b 584 Pfam PF02463 RecF/RecN/SMC N terminal domain 25 530 1.0E-20 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal THII_3016 82e848c6228dd3aa3fc843fdfac4ba1b 584 SUPERFAMILY SSF52540 25 537 1.17E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3016 82e848c6228dd3aa3fc843fdfac4ba1b 584 Gene3D G3DSA:3.40.50.300 23 270 3.3E-43 T 15-10-2018 THII_3016 82e848c6228dd3aa3fc843fdfac4ba1b 584 TIGRFAM TIGR00634 recN: DNA repair protein RecN 24 573 3.2E-150 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 THII_3016 82e848c6228dd3aa3fc843fdfac4ba1b 584 PIRSF PIRSF003128 24 578 7.8E-156 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 THII_3016 82e848c6228dd3aa3fc843fdfac4ba1b 584 Gene3D G3DSA:3.40.50.300 283 574 1.8E-54 T 15-10-2018 THII_2522 b275143910a9c27285886ea20090af5e 93 Hamap MF_00460 Protein RnfH [rnfH]. 1 91 22.647 T 15-10-2018 IPR005346 RnfH protein THII_2522 b275143910a9c27285886ea20090af5e 93 Pfam PF03658 RnfH family Ubiquitin 1 83 5.0E-32 T 15-10-2018 IPR005346 RnfH protein THII_2522 b275143910a9c27285886ea20090af5e 93 Gene3D G3DSA:3.10.20.280 1 85 4.0E-27 T 15-10-2018 IPR037021 RnfH superfamily THII_2522 b275143910a9c27285886ea20090af5e 93 SUPERFAMILY SSF54285 1 75 1.22E-23 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THII_2564 b275143910a9c27285886ea20090af5e 93 Hamap MF_00460 Protein RnfH [rnfH]. 1 91 22.647 T 15-10-2018 IPR005346 RnfH protein THII_2564 b275143910a9c27285886ea20090af5e 93 Pfam PF03658 RnfH family Ubiquitin 1 83 5.0E-32 T 15-10-2018 IPR005346 RnfH protein THII_2564 b275143910a9c27285886ea20090af5e 93 Gene3D G3DSA:3.10.20.280 1 85 4.0E-27 T 15-10-2018 IPR037021 RnfH superfamily THII_2564 b275143910a9c27285886ea20090af5e 93 SUPERFAMILY SSF54285 1 75 1.22E-23 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 SUPERFAMILY SSF82771 19 103 6.41E-23 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 Pfam PF02151 UvrB/uvrC motif 209 240 3.1E-9 T 15-10-2018 IPR001943 UVR domain GO:0005515 THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 Pfam PF01541 GIY-YIG catalytic domain 21 96 8.6E-12 T 15-10-2018 IPR000305 GIY-YIG endonuclease THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 Gene3D G3DSA:1.10.150.20 554 608 7.7E-23 T 15-10-2018 THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 SMART SM00465 20 101 6.9E-24 T 15-10-2018 IPR000305 GIY-YIG endonuclease THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 Gene3D G3DSA:4.10.860.10 203 243 1.2E-7 T 15-10-2018 THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 Gene3D G3DSA:3.40.1440.10 8 105 1.3E-32 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 Pfam PF14520 Helix-hairpin-helix domain 557 604 2.8E-7 T 15-10-2018 THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 SUPERFAMILY SSF47781 505 608 2.16E-23 T 15-10-2018 IPR010994 RuvA domain 2-like THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 12 588 6.2E-189 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 541 2.4E-48 T 15-10-2018 IPR001162 UvrC family homology region THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 Gene3D G3DSA:3.30.420.340 378 550 7.7E-51 T 15-10-2018 IPR038476 UvrC homology region 2 superfamily THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 7 606 27.999 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 SMART SM00278 587 606 100.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 SMART SM00278 555 574 3.2 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 THII_0561 45065a7e6dc703cf848a6dd686dd6204 610 SUPERFAMILY SSF46600 192 245 6.15E-14 T 15-10-2018 IPR036876 UVR domain superfamily THII_0944 fd57ff2305b478144277f4e0eb74699c 735 Gene3D G3DSA:3.30.565.10 568 712 7.1E-26 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0944 fd57ff2305b478144277f4e0eb74699c 735 Gene3D G3DSA:2.10.70.100 425 472 2.8E-15 T 15-10-2018 THII_0944 fd57ff2305b478144277f4e0eb74699c 735 Pfam PF05228 CHASE4 domain 53 206 8.5E-30 T 15-10-2018 IPR007892 CHASE4 THII_0944 fd57ff2305b478144277f4e0eb74699c 735 Gene3D G3DSA:3.30.450.20 351 423 3.0E-23 T 15-10-2018 THII_0944 fd57ff2305b478144277f4e0eb74699c 735 SMART SM00387 613 707 0.0021 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0944 fd57ff2305b478144277f4e0eb74699c 735 Pfam PF07730 Histidine kinase 499 569 1.6E-5 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 THII_0944 fd57ff2305b478144277f4e0eb74699c 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 665 4.7E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0944 fd57ff2305b478144277f4e0eb74699c 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 685 4.7E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0944 fd57ff2305b478144277f4e0eb74699c 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 704 4.7E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0944 fd57ff2305b478144277f4e0eb74699c 735 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 381 477 2.2E-9 T 15-10-2018 IPR000014 PAS domain THII_0944 fd57ff2305b478144277f4e0eb74699c 735 Pfam PF08447 PAS fold 379 465 1.2E-21 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_0944 fd57ff2305b478144277f4e0eb74699c 735 SUPERFAMILY SSF55785 364 472 5.93E-19 T 15-10-2018 IPR035965 PAS domain superfamily THII_0944 fd57ff2305b478144277f4e0eb74699c 735 SMART SM00086 429 471 9.1E-10 T 15-10-2018 IPR001610 PAC motif THII_0944 fd57ff2305b478144277f4e0eb74699c 735 SUPERFAMILY SSF55874 575 704 2.36E-17 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 Gene3D G3DSA:2.40.30.130 453 545 1.5E-10 T 15-10-2018 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 868 193.858 T 15-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 Gene3D G3DSA:3.30.54.20 617 670 4.4E-53 T 15-10-2018 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 SUPERFAMILY SSF55186 545 701 2.09E-52 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 Pfam PF01411 tRNA synthetases class II (A) 8 546 2.2E-223 T 15-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 Pfam PF02272 DHHA1 domain 727 864 3.8E-26 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 SUPERFAMILY SSF50447 447 545 6.0E-17 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 Gene3D G3DSA:3.10.310.40 757 865 6.6E-32 T 15-10-2018 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 646 689 1.5E-18 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 Gene3D G3DSA:3.30.930.10 2 243 2.8E-115 T 15-10-2018 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 SUPERFAMILY SSF101353 247 454 8.89E-61 T 15-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 PRINTS PR00980 Alanyl-tRNA synthetase signature 297 310 7.3E-33 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 7.3E-33 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 PRINTS PR00980 Alanyl-tRNA synthetase signature 227 240 7.3E-33 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 7.3E-33 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 PRINTS PR00980 Alanyl-tRNA synthetase signature 273 289 7.3E-33 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 847 0.0 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 SMART SM00863 646 689 6.5E-22 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 SUPERFAMILY SSF55681 4 246 1.19E-110 T 15-10-2018 THII_1411 53eb73417472a8ae8dd1a855ebea7925 868 Gene3D G3DSA:3.30.980.10 555 690 4.4E-53 T 15-10-2018 THII_1014 24b44c2eed543aa4edc4576f74b88bd7 619 PIRSF PIRSF028304 5 619 2.6E-164 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like THII_1014 24b44c2eed543aa4edc4576f74b88bd7 619 Pfam PF05947 Type VI secretion system, TssF 10 616 1.5E-184 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like THII_1014 24b44c2eed543aa4edc4576f74b88bd7 619 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 9 617 4.7E-178 T 15-10-2018 IPR010272 Type VI secretion system, TssF-like THII_3586 eb1c00a57686bac2a363107862b22c3a 317 SUPERFAMILY SSF52151 3 300 1.2E-72 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_3586 eb1c00a57686bac2a363107862b22c3a 317 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 303 5.8E-36 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain THII_3586 eb1c00a57686bac2a363107862b22c3a 317 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 290 3.0E-109 T 15-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 THII_3586 eb1c00a57686bac2a363107862b22c3a 317 Pfam PF00698 Acyl transferase domain 6 302 5.9E-37 T 15-10-2018 IPR014043 Acyl transferase THII_3586 eb1c00a57686bac2a363107862b22c3a 317 Gene3D G3DSA:3.40.366.10 6 283 6.2E-96 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 THII_3586 eb1c00a57686bac2a363107862b22c3a 317 SUPERFAMILY SSF55048 127 196 1.44E-16 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding THII_3586 eb1c00a57686bac2a363107862b22c3a 317 PIRSF PIRSF000446 1 311 5.7E-116 T 15-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 THII_3586 eb1c00a57686bac2a363107862b22c3a 317 Gene3D G3DSA:3.30.70.250 124 196 6.2E-96 T 15-10-2018 THII_0749 ad3486fbafca2939098d971b5a3ec108 362 Pfam PF13641 Glycosyltransferase like family 2 11 253 6.5E-14 T 15-10-2018 THII_0749 ad3486fbafca2939098d971b5a3ec108 362 Gene3D G3DSA:3.90.550.10 9 264 5.2E-25 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0749 ad3486fbafca2939098d971b5a3ec108 362 SUPERFAMILY SSF53448 11 303 8.34E-29 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0570 373dc0d8f88a1df48d9eaafefa91cb78 778 Pfam PF00271 Helicase conserved C-terminal domain 492 588 2.7E-5 T 15-10-2018 IPR001650 Helicase, C-terminal THII_0570 373dc0d8f88a1df48d9eaafefa91cb78 778 Gene3D G3DSA:3.40.50.300 469 610 1.6E-14 T 15-10-2018 THII_0570 373dc0d8f88a1df48d9eaafefa91cb78 778 SUPERFAMILY SSF109604 5 121 2.51E-5 T 15-10-2018 THII_0570 373dc0d8f88a1df48d9eaafefa91cb78 778 Gene3D G3DSA:3.40.50.300 233 464 5.5E-15 T 15-10-2018 THII_0570 373dc0d8f88a1df48d9eaafefa91cb78 778 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 267 629 1.5E-46 T 15-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core THII_0570 373dc0d8f88a1df48d9eaafefa91cb78 778 SUPERFAMILY SSF52540 265 592 1.99E-30 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0570 373dc0d8f88a1df48d9eaafefa91cb78 778 Pfam PF00270 DEAD/DEAH box helicase 251 439 2.0E-10 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 THII_0570 373dc0d8f88a1df48d9eaafefa91cb78 778 SMART SM00487 242 467 0.0013 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_0570 373dc0d8f88a1df48d9eaafefa91cb78 778 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 13 204 1.1E-19 T 15-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain THII_0570 373dc0d8f88a1df48d9eaafefa91cb78 778 SMART SM00490 508 589 4.0E-5 T 15-10-2018 IPR001650 Helicase, C-terminal THII_0570 373dc0d8f88a1df48d9eaafefa91cb78 778 Gene3D G3DSA:1.10.3210.30 2 198 5.6E-15 T 15-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 Pfam PF13432 Tetratricopeptide repeat 271 331 1.4E-7 T 15-10-2018 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 Gene3D G3DSA:1.25.40.10 407 581 1.1E-31 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 SMART SM00028 196 229 320.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 SMART SM00028 400 433 2.6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 SMART SM00028 434 467 28.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 SMART SM00028 230 263 490.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 SMART SM00028 468 502 92.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 SMART SM00028 506 539 0.047 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 SMART SM00028 365 398 100.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 SMART SM00028 298 331 3.8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 Pfam PF13414 TPR repeat 409 448 5.9E-8 T 15-10-2018 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 Gene3D G3DSA:1.25.40.10 67 271 3.7E-18 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 SUPERFAMILY SSF48452 196 391 4.27E-23 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 SUPERFAMILY SSF48452 404 572 3.37E-26 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 SUPERFAMILY SSF48452 68 231 4.93E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 Gene3D G3DSA:1.25.40.10 272 406 5.1E-17 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 Pfam PF14559 Tetratricopeptide repeat 516 576 8.0E-8 T 15-10-2018 THII_2311 3e0373f1abd69dc3cfd22b182ad0da2f 584 Pfam PF14559 Tetratricopeptide repeat 172 237 3.7E-8 T 15-10-2018 THII_1461 2e2073623f7ea7e855876b6fda4932d7 238 Gene3D G3DSA:3.40.50.2020 121 238 7.0E-15 T 15-10-2018 THII_1461 2e2073623f7ea7e855876b6fda4932d7 238 SUPERFAMILY SSF53271 67 237 5.64E-32 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like THII_1277 961129ca863852c94479aa38858482ff 251 Pfam PF01464 Transglycosylase SLT domain 128 225 1.5E-27 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 THII_1277 961129ca863852c94479aa38858482ff 251 SUPERFAMILY SSF53955 119 249 8.16E-46 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_1277 961129ca863852c94479aa38858482ff 251 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 145 173 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 THII_1277 961129ca863852c94479aa38858482ff 251 Pfam PF13511 Domain of unknown function (DUF4124) 21 60 5.9E-6 T 15-10-2018 IPR025392 Domain of unknown function DUF4124 THII_1277 961129ca863852c94479aa38858482ff 251 Gene3D G3DSA:1.10.530.10 104 251 8.3E-43 T 15-10-2018 THII_1708 982af002b7cdd21448cad223631edc02 356 Gene3D G3DSA:3.40.50.2000 166 332 7.9E-33 T 15-10-2018 THII_1708 982af002b7cdd21448cad223631edc02 356 Pfam PF00534 Glycosyl transferases group 1 174 326 1.5E-27 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_1708 982af002b7cdd21448cad223631edc02 356 SUPERFAMILY SSF53756 52 343 1.1E-45 T 15-10-2018 THII_3008 69227c089d18bdb35235b07608b678a8 1153 Gene3D G3DSA:1.10.10.1600 432 508 2.0E-30 T 15-10-2018 THII_3008 69227c089d18bdb35235b07608b678a8 1153 Pfam PF14579 Helix-hairpin-helix motif 798 887 6.6E-26 T 15-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_3008 69227c089d18bdb35235b07608b678a8 1153 Pfam PF02811 PHP domain 7 169 5.7E-43 T 15-10-2018 IPR004013 PHP domain GO:0003824 THII_3008 69227c089d18bdb35235b07608b678a8 1153 Gene3D G3DSA:2.40.50.140 970 1074 5.3E-8 T 15-10-2018 THII_3008 69227c089d18bdb35235b07608b678a8 1153 Pfam PF01336 OB-fold nucleic acid binding domain 989 1062 6.0E-8 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 THII_3008 69227c089d18bdb35235b07608b678a8 1153 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1023 0.0 T 15-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_3008 69227c089d18bdb35235b07608b678a8 1153 SMART SM00481 6 73 1.2E-20 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal THII_3008 69227c089d18bdb35235b07608b678a8 1153 Gene3D G3DSA:3.20.20.140 1 266 1.6E-92 T 15-10-2018 THII_3008 69227c089d18bdb35235b07608b678a8 1153 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 288 723 1.1E-179 T 15-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_3008 69227c089d18bdb35235b07608b678a8 1153 SUPERFAMILY SSF89550 5 260 2.75E-15 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 THII_3008 69227c089d18bdb35235b07608b678a8 1153 SUPERFAMILY SSF50249 973 1059 1.13E-6 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0309 55b10323080614ec36bee9a88c0bec63 274 SMART SM01383 42 118 8.0E-47 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0309 55b10323080614ec36bee9a88c0bec63 274 SUPERFAMILY SSF50104 127 272 2.23E-60 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily THII_0309 55b10323080614ec36bee9a88c0bec63 274 Gene3D G3DSA:4.10.950.10 196 273 3.2E-33 T 15-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0309 55b10323080614ec36bee9a88c0bec63 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.968 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 THII_0309 55b10323080614ec36bee9a88c0bec63 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 5 273 1.2E-128 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 THII_0309 55b10323080614ec36bee9a88c0bec63 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 15-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0309 55b10323080614ec36bee9a88c0bec63 274 SUPERFAMILY SSF50249 3 125 7.2E-50 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0309 55b10323080614ec36bee9a88c0bec63 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.3E-35 T 15-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0309 55b10323080614ec36bee9a88c0bec63 274 Gene3D G3DSA:2.30.30.30 115 195 2.6E-32 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 THII_0309 55b10323080614ec36bee9a88c0bec63 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.2E-55 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 THII_0309 55b10323080614ec36bee9a88c0bec63 274 SMART SM01382 124 252 2.6E-89 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 THII_0309 55b10323080614ec36bee9a88c0bec63 274 PIRSF PIRSF002158 5 274 1.9E-103 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0309 55b10323080614ec36bee9a88c0bec63 274 Gene3D G3DSA:2.40.50.140 1 114 1.4E-49 T 15-10-2018 THII_3525 4d8d45dda247b37cb16272e63c87dabe 264 Pfam PF05685 Putative restriction endonuclease 27 170 5.1E-21 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3525 4d8d45dda247b37cb16272e63c87dabe 264 Gene3D G3DSA:3.90.1570.10 24 142 3.9E-7 T 15-10-2018 THII_3525 4d8d45dda247b37cb16272e63c87dabe 264 SUPERFAMILY SSF52980 26 164 4.56E-14 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 SUPERFAMILY SSF63737 15 161 4.05E-6 T 15-10-2018 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 Gene3D G3DSA:1.10.390.60 173 401 3.1E-27 T 15-10-2018 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 SUPERFAMILY SSF159501 639 888 2.96E-62 T 15-10-2018 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 Pfam PF13180 PDZ domain 896 975 4.9E-14 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 Pfam PF01433 Peptidase family M1 domain 258 397 6.4E-11 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 Gene3D G3DSA:3.40.50.11550 645 870 7.1E-27 T 15-10-2018 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 SUPERFAMILY SSF55486 179 409 1.32E-36 T 15-10-2018 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 Gene3D G3DSA:1.10.8.760 757 822 7.1E-27 T 15-10-2018 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 SUPERFAMILY SSF50156 894 973 2.63E-13 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 SMART SM00228 896 966 6.1E-7 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 Gene3D G3DSA:2.30.42.10 897 980 1.3E-14 T 15-10-2018 THII_3486 c6a5a04d51888760b85611210fb2d3c1 982 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 655 859 4.6E-59 T 15-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN THII_3420 2ee47e231e155ab1e465786e625d3fcc 414 SMART SM00240 15 68 3.3E-4 T 15-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 THII_3420 2ee47e231e155ab1e465786e625d3fcc 414 Pfam PF00005 ABC transporter 127 286 8.2E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_3420 2ee47e231e155ab1e465786e625d3fcc 414 SUPERFAMILY SSF49879 8 76 3.39E-10 T 15-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 THII_3420 2ee47e231e155ab1e465786e625d3fcc 414 SUPERFAMILY SSF52540 112 352 8.15E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3420 2ee47e231e155ab1e465786e625d3fcc 414 SMART SM00382 132 336 4.1E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3420 2ee47e231e155ab1e465786e625d3fcc 414 Gene3D G3DSA:3.40.50.300 103 358 1.3E-45 T 15-10-2018 THII_3420 2ee47e231e155ab1e465786e625d3fcc 414 Pfam PF00498 FHA domain 17 72 5.4E-8 T 15-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 THII_3420 2ee47e231e155ab1e465786e625d3fcc 414 Gene3D G3DSA:2.60.200.20 1 100 3.1E-9 T 15-10-2018 THII_3597 2731a807e9f9d1721a61c52d099de9c3 722 Pfam PF13361 UvrD-like helicase C-terminal domain 278 622 4.6E-73 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 THII_3597 2731a807e9f9d1721a61c52d099de9c3 722 SUPERFAMILY SSF52540 6 649 2.55E-171 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3597 2731a807e9f9d1721a61c52d099de9c3 722 Gene3D G3DSA:1.10.486.10 380 546 2.0E-122 T 15-10-2018 THII_3597 2731a807e9f9d1721a61c52d099de9c3 722 Gene3D G3DSA:3.40.50.300 10 274 2.9E-94 T 15-10-2018 THII_3597 2731a807e9f9d1721a61c52d099de9c3 722 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 5.3E-73 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 THII_3597 2731a807e9f9d1721a61c52d099de9c3 722 Gene3D G3DSA:1.10.10.160 114 188 2.9E-94 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily THII_3597 2731a807e9f9d1721a61c52d099de9c3 722 Gene3D G3DSA:3.40.50.300 282 643 2.0E-122 T 15-10-2018 THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 Pfam PF05048 Periplasmic copper-binding protein (NosD) 133 359 1.6E-50 T 15-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 196 229 1.3E-7 T 15-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 Gene3D G3DSA:2.160.20.10 173 348 2.7E-16 T 15-10-2018 IPR012334 Pectin lyase fold THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 SUPERFAMILY SSF51126 16 388 7.61E-61 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 22 399 2.6E-118 T 15-10-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 Gene3D G3DSA:2.160.20.10 15 119 1.2E-10 T 15-10-2018 IPR012334 Pectin lyase fold THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 SMART SM00710 272 293 3800.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 SMART SM00710 103 124 1200.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 SMART SM00710 197 218 26.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 SMART SM00710 125 153 4700.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 SMART SM00710 219 242 6000.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 SMART SM00710 295 316 1700.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 SMART SM00710 154 175 1000.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2888 1ece3e664bd7bbc6335dc6f9ade52c27 403 SMART SM00710 245 266 21.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_3498 7c21f3ed0b9aa40d0868b12301b298fb 454 Pfam PF00364 Biotin-requiring enzyme 5 76 1.1E-20 T 15-10-2018 IPR000089 Biotin/lipoyl attachment THII_3498 7c21f3ed0b9aa40d0868b12301b298fb 454 Gene3D G3DSA:4.10.320.10 152 195 2.1E-17 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 THII_3498 7c21f3ed0b9aa40d0868b12301b298fb 454 Gene3D G3DSA:2.40.50.100 2 80 7.8E-21 T 15-10-2018 THII_3498 7c21f3ed0b9aa40d0868b12301b298fb 454 SUPERFAMILY SSF52777 213 454 1.38E-83 T 15-10-2018 THII_3498 7c21f3ed0b9aa40d0868b12301b298fb 454 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 227 453 4.7E-82 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 THII_3498 7c21f3ed0b9aa40d0868b12301b298fb 454 Pfam PF02817 e3 binding domain 151 185 1.2E-13 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 THII_3498 7c21f3ed0b9aa40d0868b12301b298fb 454 SUPERFAMILY SSF51230 3 81 3.93E-21 T 15-10-2018 IPR011053 Single hybrid motif THII_3498 7c21f3ed0b9aa40d0868b12301b298fb 454 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 4 454 1.8E-172 T 15-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 THII_3498 7c21f3ed0b9aa40d0868b12301b298fb 454 SUPERFAMILY SSF47005 149 191 1.96E-11 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 THII_3498 7c21f3ed0b9aa40d0868b12301b298fb 454 Gene3D G3DSA:3.30.559.10 210 454 3.0E-93 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 THII_3498 7c21f3ed0b9aa40d0868b12301b298fb 454 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 THII_1802 1d6928e9a115f9d1d6f69aa7f8f10d35 145 SUPERFAMILY SSF52821 7 144 1.31E-20 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily THII_1802 1d6928e9a115f9d1d6f69aa7f8f10d35 145 Pfam PF00581 Rhodanese-like domain 10 121 8.7E-11 T 15-10-2018 IPR001763 Rhodanese-like domain THII_1802 1d6928e9a115f9d1d6f69aa7f8f10d35 145 SMART SM00450 10 128 3.1E-15 T 15-10-2018 IPR001763 Rhodanese-like domain THII_1802 1d6928e9a115f9d1d6f69aa7f8f10d35 145 Gene3D G3DSA:3.40.250.10 6 145 1.4E-32 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily THII_2167 cfbb17872e2a5f9d199ab30e2d792cd5 207 Pfam PF14346 Domain of unknown function (DUF4398) 18 104 1.2E-9 T 15-10-2018 IPR025511 Domain of unknown function DUF4398 THII_2163 c875db08bbd7ba1275142c582b274901 513 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 513 177.442 T 15-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 THII_2163 c875db08bbd7ba1275142c582b274901 513 Gene3D G3DSA:1.10.1060.10 359 437 9.7E-11 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_2163 c875db08bbd7ba1275142c582b274901 513 SUPERFAMILY SSF142019 91 298 7.45E-59 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2163 c875db08bbd7ba1275142c582b274901 513 Pfam PF10531 SLBB domain 290 337 9.3E-11 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2163 c875db08bbd7ba1275142c582b274901 513 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 409 420 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2163 c875db08bbd7ba1275142c582b274901 513 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 111 3.3E-34 T 15-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain THII_2163 c875db08bbd7ba1275142c582b274901 513 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 439 2.1E-172 T 15-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 THII_2163 c875db08bbd7ba1275142c582b274901 513 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 136 278 1.6E-45 T 15-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2163 c875db08bbd7ba1275142c582b274901 513 Gene3D G3DSA:3.40.50.11540 141 286 3.3E-11 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2163 c875db08bbd7ba1275142c582b274901 513 Pfam PF13237 4Fe-4S dicluster domain 369 420 2.6E-7 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2163 c875db08bbd7ba1275142c582b274901 513 SUPERFAMILY SSF46548 328 439 4.53E-19 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_1832 20fc2512272795d6bf628402cd74823c 356 Gene3D G3DSA:3.90.1150.10 13 351 5.4E-110 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_1832 20fc2512272795d6bf628402cd74823c 356 SUPERFAMILY SSF53383 11 356 1.75E-70 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_1832 20fc2512272795d6bf628402cd74823c 356 Pfam PF00155 Aminotransferase class I and II 26 352 1.1E-49 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 THII_1832 20fc2512272795d6bf628402cd74823c 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 356 52.32 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 THII_1832 20fc2512272795d6bf628402cd74823c 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 354 2.4E-99 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 THII_1832 20fc2512272795d6bf628402cd74823c 356 Gene3D G3DSA:3.40.640.10 50 264 5.4E-110 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_1862 ff24029ec98f5af4edea3642348ed308 856 Gene3D G3DSA:3.30.499.10 390 517 5.3E-144 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 THII_1862 ff24029ec98f5af4edea3642348ed308 856 SUPERFAMILY SSF52016 161 360 5.89E-62 T 15-10-2018 THII_1862 ff24029ec98f5af4edea3642348ed308 856 PIRSF PIRSF036687 1 846 0.0 T 15-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 THII_1862 ff24029ec98f5af4edea3642348ed308 856 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 840 0.0 T 15-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 THII_1862 ff24029ec98f5af4edea3642348ed308 856 ProSitePatterns PS01244 Aconitase family signature 2. 748 761 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 THII_1862 ff24029ec98f5af4edea3642348ed308 856 Gene3D G3DSA:3.30.499.10 671 851 1.6E-64 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 THII_1862 ff24029ec98f5af4edea3642348ed308 856 Gene3D G3DSA:3.40.1060.10 373 669 5.3E-144 T 15-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 THII_1862 ff24029ec98f5af4edea3642348ed308 856 Gene3D G3DSA:3.20.19.10 161 349 4.1E-69 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 THII_1862 ff24029ec98f5af4edea3642348ed308 856 SUPERFAMILY SSF74778 1 159 9.68E-64 T 15-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 THII_1862 ff24029ec98f5af4edea3642348ed308 856 SUPERFAMILY SSF53732 368 843 4.84E-145 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 THII_1862 ff24029ec98f5af4edea3642348ed308 856 Gene3D G3DSA:1.25.40.310 1 160 4.5E-63 T 15-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 THII_1862 ff24029ec98f5af4edea3642348ed308 856 ProSitePatterns PS00450 Aconitase family signature 1. 690 707 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 THII_1862 ff24029ec98f5af4edea3642348ed308 856 Pfam PF06434 Aconitate hydratase 2 N-terminus 167 370 2.3E-96 T 15-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 THII_1862 ff24029ec98f5af4edea3642348ed308 856 Pfam PF00330 Aconitase family (aconitate hydratase) 460 802 2.2E-38 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 THII_1862 ff24029ec98f5af4edea3642348ed308 856 Pfam PF11791 Aconitate B N-terminal domain 4 155 2.7E-61 T 15-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 THII_0473 cc2edc23b711bddb2003b9f591b60a88 212 SUPERFAMILY SSF53335 13 210 1.18E-38 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0473 cc2edc23b711bddb2003b9f591b60a88 212 Gene3D G3DSA:3.40.50.150 1 211 1.4E-71 T 15-10-2018 THII_0473 cc2edc23b711bddb2003b9f591b60a88 212 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 4 210 2.6E-64 T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 THII_0473 cc2edc23b711bddb2003b9f591b60a88 212 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 209 1.7E-60 T 15-10-2018 THII_0473 cc2edc23b711bddb2003b9f591b60a88 212 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 211 34.979 T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 THII_1695 011bb1250b94abec65b75d741994ec5a 323 SUPERFAMILY SSF53448 67 322 1.48E-67 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1695 011bb1250b94abec65b75d741994ec5a 323 Gene3D G3DSA:3.90.550.10 67 323 1.0E-71 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1695 011bb1250b94abec65b75d741994ec5a 323 Pfam PF00483 Nucleotidyl transferase 69 271 1.1E-15 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 THII_1695 011bb1250b94abec65b75d741994ec5a 323 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 68 322 9.5E-138 T 15-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 THII_2950 e90411dad03c262c5ec0c2809d6a543f 156 SUPERFAMILY SSF51206 8 142 1.05E-26 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like THII_2950 e90411dad03c262c5ec0c2809d6a543f 156 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 8.3E-20 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_2950 e90411dad03c262c5ec0c2809d6a543f 156 SMART SM00100 15 134 1.3E-9 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_2950 e90411dad03c262c5ec0c2809d6a543f 156 Gene3D G3DSA:2.60.120.10 1 151 6.2E-30 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_1034 719780bdb9b830cfcc43f122a78996dd 255 SUPERFAMILY SSF55120 1 250 3.6E-88 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1034 719780bdb9b830cfcc43f122a78996dd 255 Gene3D G3DSA:3.30.70.660 105 242 4.3E-46 T 15-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 THII_1034 719780bdb9b830cfcc43f122a78996dd 255 Gene3D G3DSA:3.30.70.580 1 104 1.5E-37 T 15-10-2018 THII_1034 719780bdb9b830cfcc43f122a78996dd 255 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.4E-66 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1034 719780bdb9b830cfcc43f122a78996dd 255 PIRSF PIRSF001430 1 253 1.2E-74 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1034 719780bdb9b830cfcc43f122a78996dd 255 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 32.795 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1034 719780bdb9b830cfcc43f122a78996dd 255 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.7E-10 T 15-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1034 719780bdb9b830cfcc43f122a78996dd 255 Pfam PF01416 tRNA pseudouridine synthase 142 244 1.5E-28 T 15-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_0024 3691e5e80c4f501a62bf33a8019ffdc3 171 Gene3D G3DSA:1.10.3480.10 9 171 1.5E-29 T 15-10-2018 THII_0024 3691e5e80c4f501a62bf33a8019ffdc3 171 SUPERFAMILY SSF89155 11 170 1.96E-31 T 15-10-2018 IPR036411 TorD-like superfamily THII_0024 3691e5e80c4f501a62bf33a8019ffdc3 171 Pfam PF02613 Nitrate reductase delta subunit 39 149 3.7E-20 T 15-10-2018 IPR020945 DMSO/Nitrate reductase chaperone THII_1526 5755560f18cb6e8c38411f8b58694924 396 Gene3D G3DSA:3.30.1150.10 279 395 4.4E-20 T 15-10-2018 THII_1526 5755560f18cb6e8c38411f8b58694924 396 SUPERFAMILY SSF74653 289 381 7.06E-16 T 15-10-2018 THII_1526 5755560f18cb6e8c38411f8b58694924 396 TIGRFAM TIGR02794 tolA_full: protein TolA 144 393 2.1E-22 T 15-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 THII_1526 5755560f18cb6e8c38411f8b58694924 396 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 335 380 1.3E-9 T 15-10-2018 IPR006260 TonB/TolA, C-terminal THII_1526 5755560f18cb6e8c38411f8b58694924 396 Pfam PF13103 TonB C terminal 313 380 4.7E-12 T 15-10-2018 THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 SUPERFAMILY SSF53335 89 273 3.39E-41 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 Gene3D G3DSA:1.10.155.10 9 85 1.1E-9 T 15-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 Gene3D G3DSA:3.40.50.150 87 285 3.9E-53 T 15-10-2018 THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 PRINTS PR00996 Glutamate methyltransferase family signature 120 140 6.5E-29 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 PRINTS PR00996 Glutamate methyltransferase family signature 154 170 6.5E-29 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 PRINTS PR00996 Glutamate methyltransferase family signature 242 265 6.5E-29 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 PRINTS PR00996 Glutamate methyltransferase family signature 81 93 6.5E-29 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 PRINTS PR00996 Glutamate methyltransferase family signature 40 53 6.5E-29 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 PRINTS PR00996 Glutamate methyltransferase family signature 223 237 6.5E-29 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 Pfam PF03705 CheR methyltransferase, all-alpha domain 20 70 1.7E-7 T 15-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 SUPERFAMILY SSF47757 14 84 1.05E-10 T 15-10-2018 THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 Pfam PF01739 CheR methyltransferase, SAM binding domain 89 275 1.6E-47 T 15-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THII_0550 f48035e59b0ea3f9a1fda453064304e9 297 SMART SM00138 18 283 1.7E-52 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 SUPERFAMILY SSF50156 362 433 1.97E-11 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 SMART SM00228 362 430 0.13 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 SMART SM00228 257 339 5.8E-14 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 Gene3D G3DSA:2.30.42.10 354 438 1.1E-14 T 15-10-2018 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 Gene3D G3DSA:2.40.10.120 35 251 3.3E-85 T 15-10-2018 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 SUPERFAMILY SSF50156 215 340 3.94E-22 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 PRINTS PR00834 HtrA/DegQ protease family signature 93 105 2.0E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 PRINTS PR00834 HtrA/DegQ protease family signature 189 206 2.0E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 PRINTS PR00834 HtrA/DegQ protease family signature 211 228 2.0E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 2.0E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 PRINTS PR00834 HtrA/DegQ protease family signature 114 134 2.0E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 PRINTS PR00834 HtrA/DegQ protease family signature 154 178 2.0E-56 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 Gene3D G3DSA:2.30.42.10 252 353 4.5E-28 T 15-10-2018 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 37 432 4.2E-140 T 15-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 Pfam PF13365 Trypsin-like peptidase domain 83 218 1.1E-31 T 15-10-2018 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 Pfam PF13180 PDZ domain 257 344 6.6E-17 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_3546 fc87a2f86c8396d40a1acda5dd079436 438 SUPERFAMILY SSF50494 35 253 2.11E-66 T 15-10-2018 IPR009003 Peptidase S1, PA clan THII_1554 24e75ce72a09ead29bb2e3136dd989a7 645 SUPERFAMILY SSF56801 17 639 3.4E-182 T 15-10-2018 THII_1554 24e75ce72a09ead29bb2e3136dd989a7 645 Pfam PF00501 AMP-binding enzyme 82 519 6.5E-93 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 THII_1554 24e75ce72a09ead29bb2e3136dd989a7 645 ProSitePatterns PS00455 Putative AMP-binding domain signature. 258 269 - T 15-10-2018 IPR020845 AMP-binding, conserved site THII_1554 24e75ce72a09ead29bb2e3136dd989a7 645 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 80 8.1E-21 T 15-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 THII_1554 24e75ce72a09ead29bb2e3136dd989a7 645 Pfam PF13193 AMP-binding enzyme C-terminal domain 528 606 2.5E-22 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain THII_1554 24e75ce72a09ead29bb2e3136dd989a7 645 Gene3D G3DSA:3.30.300.30 515 645 2.2E-26 T 15-10-2018 THII_1554 24e75ce72a09ead29bb2e3136dd989a7 645 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 642 52.96 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 THII_1554 24e75ce72a09ead29bb2e3136dd989a7 645 Gene3D G3DSA:3.40.50.12780 47 512 1.7E-109 T 15-10-2018 THII_1554 24e75ce72a09ead29bb2e3136dd989a7 645 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 640 0.0 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 THII_0012 ae61d823d843c585cf854729f8735f96 1947 Gene3D G3DSA:3.40.50.720 1073 1458 1.2E-65 T 15-10-2018 THII_0012 ae61d823d843c585cf854729f8735f96 1947 SUPERFAMILY SSF54637 1499 1559 1.07E-6 T 15-10-2018 IPR029069 HotDog domain superfamily THII_0012 ae61d823d843c585cf854729f8735f96 1947 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 289 1.7E-56 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_0012 ae61d823d843c585cf854729f8735f96 1947 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 418 535 6.6E-9 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_0012 ae61d823d843c585cf854729f8735f96 1947 Pfam PF08659 KR domain 1232 1411 5.1E-31 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_0012 ae61d823d843c585cf854729f8735f96 1947 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1229 1412 1.3E-19 T 15-10-2018 THII_0012 ae61d823d843c585cf854729f8735f96 1947 Gene3D G3DSA:1.10.1200.10 933 1029 3.7E-17 T 15-10-2018 IPR036736 ACP-like superfamily THII_0012 ae61d823d843c585cf854729f8735f96 1947 Pfam PF00698 Acyl transferase domain 613 848 1.5E-31 T 15-10-2018 IPR014043 Acyl transferase THII_0012 ae61d823d843c585cf854729f8735f96 1947 Pfam PF14765 Polyketide synthase dehydratase 1487 1748 1.3E-29 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_0012 ae61d823d843c585cf854729f8735f96 1947 Pfam PF00550 Phosphopantetheine attachment site 949 1016 6.1E-5 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_0012 ae61d823d843c585cf854729f8735f96 1947 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 584 864 7.5E-28 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain THII_0012 ae61d823d843c585cf854729f8735f96 1947 Gene3D G3DSA:3.10.129.110 1499 1749 5.0E-19 T 15-10-2018 THII_0012 ae61d823d843c585cf854729f8735f96 1947 SMART SM00825 Beta-ketoacyl synthase 5 463 6.9E-52 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_0012 ae61d823d843c585cf854729f8735f96 1947 SUPERFAMILY SSF51735 1230 1457 5.36E-30 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0012 ae61d823d843c585cf854729f8735f96 1947 Gene3D G3DSA:3.40.366.20 487 887 6.6E-91 T 15-10-2018 THII_0012 ae61d823d843c585cf854729f8735f96 1947 SUPERFAMILY SSF55048 693 755 2.09E-9 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding THII_0012 ae61d823d843c585cf854729f8735f96 1947 SUPERFAMILY SSF52151 580 847 8.89E-42 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_0012 ae61d823d843c585cf854729f8735f96 1947 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 297 411 1.3E-27 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_0012 ae61d823d843c585cf854729f8735f96 1947 SUPERFAMILY SSF47336 947 1036 1.27E-8 T 15-10-2018 IPR036736 ACP-like superfamily THII_0012 ae61d823d843c585cf854729f8735f96 1947 SUPERFAMILY SSF53901 2 410 1.56E-61 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 SMART SM00382 114 384 3.1E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 SUPERFAMILY SSF57716 16 51 7.41E-12 T 15-10-2018 THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 SMART SM01086 319 414 2.8E-32 T 15-10-2018 IPR019489 Clp ATPase, C-terminal THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 SMART SM00994 15 54 1.8E-24 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 SUPERFAMILY SSF52540 66 410 8.34E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 Pfam PF06689 ClpX C4-type zinc finger 16 53 2.2E-20 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 413 2.3E-203 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 Gene3D G3DSA:3.30.50.30 4 55 3.9E-25 T 15-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 9 417 52.477 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 312 1.4E-47 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 9.7E-17 T 15-10-2018 IPR019489 Clp ATPase, C-terminal THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 Gene3D G3DSA:3.40.50.300 61 317 1.2E-108 T 15-10-2018 THII_0146 fc5ac4812fcb53515ebe32f7fcfddcdd 426 Gene3D G3DSA:1.10.8.60 318 426 6.3E-41 T 15-10-2018 THII_3414 382e992b716fae133471bdc23066e69b 331 Gene3D G3DSA:3.40.190.10 113 210 1.2E-32 T 15-10-2018 THII_3414 382e992b716fae133471bdc23066e69b 331 Gene3D G3DSA:3.40.190.10 47 275 1.2E-32 T 15-10-2018 THII_3414 382e992b716fae133471bdc23066e69b 331 Pfam PF09084 NMT1/THI5 like 45 252 1.1E-24 T 15-10-2018 IPR015168 SsuA/THI5-like THII_3414 382e992b716fae133471bdc23066e69b 331 SUPERFAMILY SSF53850 33 253 7.85E-32 T 15-10-2018 THII_3870 bc97a8d7caf09a40c5e1d964cb8fdd85 525 SUPERFAMILY SSF50249 40 126 7.87E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_3870 bc97a8d7caf09a40c5e1d964cb8fdd85 525 Pfam PF00575 S1 RNA binding domain 40 119 2.7E-6 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_3870 bc97a8d7caf09a40c5e1d964cb8fdd85 525 Gene3D G3DSA:2.40.50.140 32 126 1.3E-29 T 15-10-2018 THII_3870 bc97a8d7caf09a40c5e1d964cb8fdd85 525 SMART SM00316 37 121 4.0E-8 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_3870 bc97a8d7caf09a40c5e1d964cb8fdd85 525 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 195 458 7.6E-102 T 15-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 THII_3870 bc97a8d7caf09a40c5e1d964cb8fdd85 525 Pfam PF10150 Ribonuclease E/G family 124 425 2.2E-95 T 15-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 THII_3870 bc97a8d7caf09a40c5e1d964cb8fdd85 525 Gene3D G3DSA:3.40.1260.20 434 520 1.4E-7 T 15-10-2018 THII_0388 02bbaa46a9213f442d3c8ad4e33ce072 384 Gene3D G3DSA:3.40.50.300 12 217 8.5E-58 T 15-10-2018 THII_0388 02bbaa46a9213f442d3c8ad4e33ce072 384 Gene3D G3DSA:3.30.1220.10 247 361 5.5E-22 T 15-10-2018 IPR036627 CobW-like, C-terminal domain superfamily THII_0388 02bbaa46a9213f442d3c8ad4e33ce072 384 SMART SM00833 266 360 1.3E-16 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal THII_0388 02bbaa46a9213f442d3c8ad4e33ce072 384 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 266 358 6.7E-19 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal THII_0388 02bbaa46a9213f442d3c8ad4e33ce072 384 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 15 195 2.8E-44 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain THII_0388 02bbaa46a9213f442d3c8ad4e33ce072 384 SUPERFAMILY SSF52540 14 202 1.42E-30 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0388 02bbaa46a9213f442d3c8ad4e33ce072 384 SUPERFAMILY SSF90002 266 358 3.79E-20 T 15-10-2018 THII_3931 0fcd05b7211bdca30a21a9956baa9327 196 PIRSF PIRSF016481 10 196 1.3E-30 T 15-10-2018 IPR007446 Pilus assembly protein PilP THII_3931 0fcd05b7211bdca30a21a9956baa9327 196 Gene3D G3DSA:2.30.30.830 98 193 6.3E-27 T 15-10-2018 THII_3931 0fcd05b7211bdca30a21a9956baa9327 196 Pfam PF04351 Pilus assembly protein, PilP 35 193 1.2E-34 T 15-10-2018 IPR007446 Pilus assembly protein PilP THII_0311 ede384d6b0d3f9724b8672b9c7aecc0d 206 SUPERFAMILY SSF52166 1 204 3.01E-70 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 THII_0311 ede384d6b0d3f9724b8672b9c7aecc0d 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 11 205 32.864 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0311 ede384d6b0d3f9724b8672b9c7aecc0d 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 201 4.5E-73 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0311 ede384d6b0d3f9724b8672b9c7aecc0d 206 Pfam PF00573 Ribosomal protein L4/L1 family 16 202 2.1E-63 T 15-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 THII_0311 ede384d6b0d3f9724b8672b9c7aecc0d 206 Gene3D G3DSA:3.40.1370.10 1 206 7.7E-70 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 SUPERFAMILY SSF52540 150 390 2.28E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 174 187 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 Pfam PF00072 Response regulator receiver domain 13 121 4.3E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 363 372 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 Gene3D G3DSA:1.10.10.60 410 454 3.7E-14 T 15-10-2018 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 436 4.6E-6 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 456 4.6E-6 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 Pfam PF00158 Sigma-54 interaction domain 150 316 1.2E-68 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 Gene3D G3DSA:3.40.50.2300 7 140 9.2E-34 T 15-10-2018 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 SUPERFAMILY SSF52172 9 194 1.21E-41 T 15-10-2018 IPR011006 CheY-like superfamily THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 SMART SM00382 170 324 3.6E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 Gene3D G3DSA:3.40.50.300 141 320 1.2E-63 T 15-10-2018 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 SMART SM00448 10 121 5.0E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 Pfam PF02954 Bacterial regulatory protein, Fis family 414 453 3.3E-12 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 Gene3D G3DSA:1.10.8.60 321 400 3.4E-22 T 15-10-2018 THII_1122 9e7923d4452b8e15f679b052d6ec22fa 462 SUPERFAMILY SSF46689 364 453 4.93E-13 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3270 02b390a1640f7b22b89f5b6fd053838b 1950 SUPERFAMILY SSF50998 1473 1706 1.44E-7 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily THII_3270 02b390a1640f7b22b89f5b6fd053838b 1950 Gene3D G3DSA:3.40.50.410 37 115 3.3E-6 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_3270 02b390a1640f7b22b89f5b6fd053838b 1950 Gene3D G3DSA:2.130.10.10 1436 1724 9.4E-10 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3270 02b390a1640f7b22b89f5b6fd053838b 1950 Pfam PF05567 Neisseria PilC beta-propeller domain 1450 1714 4.1E-17 T 15-10-2018 IPR008707 PilC beta-propeller domain THII_0208 968f3f6debc239c646371ff112f92af2 804 Pfam PF09826 Beta propeller domain 60 379 4.2E-8 T 15-10-2018 IPR019198 Beta propeller domain-containing family THII_0208 968f3f6debc239c646371ff112f92af2 804 SUPERFAMILY SSF75011 120 345 1.57E-7 T 15-10-2018 THII_3118 855dfb7ac8e3029c5e399b8785a66402 276 Pfam PF05685 Putative restriction endonuclease 29 171 9.0E-20 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3118 855dfb7ac8e3029c5e399b8785a66402 276 Gene3D G3DSA:3.90.1570.10 27 143 1.1E-5 T 15-10-2018 THII_3118 855dfb7ac8e3029c5e399b8785a66402 276 SUPERFAMILY SSF52980 28 159 1.72E-10 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2635 743b57bee3113fbf235f22c50d79c6a6 139 SUPERFAMILY SSF82649 1 125 4.97E-49 T 15-10-2018 THII_2635 743b57bee3113fbf235f22c50d79c6a6 139 Gene3D G3DSA:3.90.1010.10 1 132 7.3E-58 T 15-10-2018 THII_2635 743b57bee3113fbf235f22c50d79c6a6 139 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 5.3E-67 T 15-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 THII_2635 743b57bee3113fbf235f22c50d79c6a6 139 Pfam PF01592 NifU-like N terminal domain 2 126 9.6E-57 T 15-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 THII_2602 010ffd8299592aa18a4aae836f5b1e2a 336 Gene3D G3DSA:3.40.190.10 120 329 4.7E-135 T 15-10-2018 THII_2602 010ffd8299592aa18a4aae836f5b1e2a 336 SUPERFAMILY SSF53850 27 331 3.82E-91 T 15-10-2018 THII_2602 010ffd8299592aa18a4aae836f5b1e2a 336 Gene3D G3DSA:3.40.190.10 33 299 4.7E-135 T 15-10-2018 THII_2602 010ffd8299592aa18a4aae836f5b1e2a 336 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 15-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 THII_2602 010ffd8299592aa18a4aae836f5b1e2a 336 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 24 330 9.1E-145 T 15-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 THII_2602 010ffd8299592aa18a4aae836f5b1e2a 336 Pfam PF13531 Bacterial extracellular solute-binding protein 39 284 8.2E-45 T 15-10-2018 THII_3474 8e23f629a8f416c9a041c39a46425210 151 Pfam PF01724 Domain of unknown function DUF29 4 149 6.0E-46 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_3474 8e23f629a8f416c9a041c39a46425210 151 Gene3D G3DSA:1.20.1220.20 1 151 4.8E-26 T 15-10-2018 THII_1180 fa0f43ce373900805ed4685118b4b592 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-27 T 15-10-2018 THII_1180 fa0f43ce373900805ed4685118b4b592 89 SUPERFAMILY SSF47060 3 88 1.09E-34 T 15-10-2018 IPR009068 S15/NS1, RNA-binding THII_1180 fa0f43ce373900805ed4685118b4b592 89 Gene3D G3DSA:1.10.287.10 2 89 1.3E-34 T 15-10-2018 THII_1180 fa0f43ce373900805ed4685118b4b592 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 88 7.5E-38 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1180 fa0f43ce373900805ed4685118b4b592 89 Pfam PF00312 Ribosomal protein S15 8 88 7.1E-36 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1180 fa0f43ce373900805ed4685118b4b592 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.877 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1180 fa0f43ce373900805ed4685118b4b592 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1180 fa0f43ce373900805ed4685118b4b592 89 SMART SM01387 8 88 3.0E-48 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0043 1d44afdba1b504b725d2883cea09e277 134 Pfam PF12844 Helix-turn-helix domain 5 64 1.3E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_0043 1d44afdba1b504b725d2883cea09e277 134 Gene3D G3DSA:1.10.260.40 1 122 5.3E-16 T 15-10-2018 THII_0043 1d44afdba1b504b725d2883cea09e277 134 SMART SM00530 6 61 6.3E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_0043 1d44afdba1b504b725d2883cea09e277 134 Pfam PF07412 Geminin 97 126 6.1E-5 T 15-10-2018 IPR022786 Geminin/Multicilin GO:0006275 THII_0043 1d44afdba1b504b725d2883cea09e277 134 SUPERFAMILY SSF47413 1 67 2.01E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_2105 0464b543bba31de00a607e5948e74235 99 Gene3D G3DSA:3.30.70.1060 1 98 5.9E-34 T 15-10-2018 THII_2105 0464b543bba31de00a607e5948e74235 99 SUPERFAMILY SSF54909 1 97 4.69E-30 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel THII_2105 0464b543bba31de00a607e5948e74235 99 Pfam PF03795 YCII-related domain 1 95 1.1E-27 T 15-10-2018 IPR005545 YCII-related THII_2338 06ef336e59a5e58ac0706ef386499b8b 500 PIRSF PIRSF000484 8 497 1.8E-145 T 15-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 THII_2338 06ef336e59a5e58ac0706ef386499b8b 500 SUPERFAMILY SSF51690 149 496 1.35E-108 T 15-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 THII_2338 06ef336e59a5e58ac0706ef386499b8b 500 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 167 346 3.0E-8 T 15-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 THII_2338 06ef336e59a5e58ac0706ef386499b8b 500 Gene3D G3DSA:3.20.20.70 161 329 1.3E-178 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2338 06ef336e59a5e58ac0706ef386499b8b 500 SUPERFAMILY SSF54675 11 148 4.71E-45 T 15-10-2018 THII_2338 06ef336e59a5e58ac0706ef386499b8b 500 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 13 480 3.7E-167 T 15-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 THII_2338 06ef336e59a5e58ac0706ef386499b8b 500 Gene3D G3DSA:3.20.140.10 14 487 1.3E-178 T 15-10-2018 THII_3141 129ed238de58a9083f495c3f2ac0d38c 560 SMART SM00304 270 323 0.0095 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3141 129ed238de58a9083f495c3f2ac0d38c 560 SUPERFAMILY SSF55073 349 534 2.04E-64 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3141 129ed238de58a9083f495c3f2ac0d38c 560 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 356 534 4.1E-61 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_3141 129ed238de58a9083f495c3f2ac0d38c 560 Gene3D G3DSA:3.30.70.1230 350 537 7.2E-73 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3141 129ed238de58a9083f495c3f2ac0d38c 560 SMART SM00044 327 524 3.1E-73 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_3141 129ed238de58a9083f495c3f2ac0d38c 560 Pfam PF05228 CHASE4 domain 28 179 1.6E-31 T 15-10-2018 IPR007892 CHASE4 THII_0176 fcd273945a6073932e92ee330d7699dd 592 Gene3D G3DSA:1.10.10.1020 1 115 5.3E-17 T 15-10-2018 THII_0176 fcd273945a6073932e92ee330d7699dd 592 Pfam PF13604 AAA domain 162 374 4.7E-34 T 15-10-2018 THII_0176 fcd273945a6073932e92ee330d7699dd 592 SUPERFAMILY SSF52540 11 344 1.11E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0176 fcd273945a6073932e92ee330d7699dd 592 Gene3D G3DSA:3.40.50.300 456 577 3.0E-29 T 15-10-2018 THII_0176 fcd273945a6073932e92ee330d7699dd 592 Gene3D G3DSA:3.40.50.300 351 455 5.3E-15 T 15-10-2018 THII_0176 fcd273945a6073932e92ee330d7699dd 592 SUPERFAMILY SSF52540 289 588 6.24E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0176 fcd273945a6073932e92ee330d7699dd 592 Gene3D G3DSA:3.40.50.300 116 350 1.5E-58 T 15-10-2018 THII_0176 fcd273945a6073932e92ee330d7699dd 592 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 586 45.893 T 15-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 THII_0176 fcd273945a6073932e92ee330d7699dd 592 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 8 588 1.6E-165 T 15-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 THII_0176 fcd273945a6073932e92ee330d7699dd 592 Pfam PF13538 UvrD-like helicase C-terminal domain 517 562 1.9E-15 T 15-10-2018 IPR027785 UvrD-like helicase C-terminal domain THII_3512 093ab7d467745513b7d6f4eb3e901e2e 165 Gene3D G3DSA:2.40.40.10 71 162 3.3E-24 T 15-10-2018 IPR036908 RlpA-like domain superfamily THII_3512 093ab7d467745513b7d6f4eb3e901e2e 165 Pfam PF03330 Lytic transglycolase 73 152 8.9E-15 T 15-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain THII_3512 093ab7d467745513b7d6f4eb3e901e2e 165 SUPERFAMILY SSF50685 79 150 7.22E-6 T 15-10-2018 IPR036908 RlpA-like domain superfamily THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Gene3D G3DSA:2.130.10.10 854 938 1.6E-34 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Gene3D G3DSA:2.130.10.10 768 853 5.8E-30 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Gene3D G3DSA:2.130.10.10 939 1017 1.5E-28 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 620 634 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 1098 1137 2.1E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 846 885 1.6E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 1056 1095 1.5E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 1014 1053 1.3E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 888 927 9.9E-12 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 1140 1179 4.3E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 972 1011 5.3E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 594 633 8.1E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 636 675 1.8E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 804 843 8.6E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 1224 1263 2.1E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 1182 1221 1.3E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 720 759 1.1E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 762 801 1.9E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 678 717 2.0E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SMART SM00320 930 969 9.1E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 788 802 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 956 970 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1124 1138 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 PRINTS PR00320 G protein beta WD-40 repeat signature 746 760 3.4E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 PRINTS PR00320 G protein beta WD-40 repeat signature 872 886 3.4E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 PRINTS PR00320 G protein beta WD-40 repeat signature 914 928 3.4E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 662 676 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SUPERFAMILY SSF52540 62 307 3.15E-19 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SUPERFAMILY SSF50978 594 884 8.06E-100 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SUPERFAMILY SSF50978 1014 1265 5.23E-84 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Gene3D G3DSA:3.40.50.300 59 221 1.8E-8 T 15-10-2018 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 872 886 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 704 718 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1208 1222 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Gene3D G3DSA:2.130.10.10 1185 1282 6.6E-27 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 SUPERFAMILY SSF50978 809 1094 1.44E-96 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 746 760 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 914 928 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1082 1096 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Gene3D G3DSA:2.130.10.10 534 767 7.4E-66 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Gene3D G3DSA:2.130.10.10 1018 1184 2.1E-63 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 1102 1136 3.0E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 805 842 2.7E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 1141 1178 2.2E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 637 674 1.9E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 1015 1052 3.7E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 601 632 0.0011 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 679 716 5.8E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 1183 1220 4.1E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 763 800 1.9E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 847 884 1.1E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 974 1010 1.2E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 932 968 4.7E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 1057 1094 4.1E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 721 758 0.0015 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 889 926 1.9E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2120 ba4d4b1cf83f27ec71e41bab5a70c04a 1295 Pfam PF00400 WD domain, G-beta repeat 1226 1262 0.0091 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_2331 18b807a8f9c2b1409c1d7dcd087168e7 164 SUPERFAMILY SSF55021 79 162 1.08E-24 T 15-10-2018 THII_2331 18b807a8f9c2b1409c1d7dcd087168e7 164 SUPERFAMILY SSF55021 1 75 2.64E-23 T 15-10-2018 THII_2331 18b807a8f9c2b1409c1d7dcd087168e7 164 Gene3D G3DSA:3.30.70.1150 83 164 1.2E-27 T 15-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal THII_2331 18b807a8f9c2b1409c1d7dcd087168e7 164 Pfam PF13710 ACT domain 13 72 1.2E-15 T 15-10-2018 THII_2331 18b807a8f9c2b1409c1d7dcd087168e7 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 1.0E-32 T 15-10-2018 THII_2331 18b807a8f9c2b1409c1d7dcd087168e7 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 8.7E-26 T 15-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 THII_2331 18b807a8f9c2b1409c1d7dcd087168e7 164 Gene3D G3DSA:3.30.70.260 1 79 5.8E-37 T 15-10-2018 THII_2331 18b807a8f9c2b1409c1d7dcd087168e7 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 6.1E-63 T 15-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 THII_0939 80fe14688d87ff63050b0fe81516816c 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 19 292 42.533 T 15-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 THII_0939 80fe14688d87ff63050b0fe81516816c 293 Pfam PF02666 Phosphatidylserine decarboxylase 72 289 3.1E-54 T 15-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 THII_0939 80fe14688d87ff63050b0fe81516816c 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 59 289 5.7E-77 T 15-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 THII_1287 9b845c5fdb2626254a98b8ba1d5d52fb 121 SMART SM00448 3 116 9.0E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1287 9b845c5fdb2626254a98b8ba1d5d52fb 121 Gene3D G3DSA:3.40.50.12740 1 121 3.7E-44 T 15-10-2018 THII_1287 9b845c5fdb2626254a98b8ba1d5d52fb 121 SUPERFAMILY SSF52172 4 121 1.57E-36 T 15-10-2018 IPR011006 CheY-like superfamily THII_1287 9b845c5fdb2626254a98b8ba1d5d52fb 121 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1026 8232e403c2769016cb6df0014e52b499 346 Gene3D G3DSA:2.40.30.160 217 335 1.2E-35 T 15-10-2018 THII_1026 8232e403c2769016cb6df0014e52b499 346 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 247 323 1.4E-6 T 15-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 THII_1026 8232e403c2769016cb6df0014e52b499 346 SUPERFAMILY SSF101790 265 343 1.37E-12 T 15-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal THII_1026 8232e403c2769016cb6df0014e52b499 346 Gene3D G3DSA:3.30.70.1630 45 214 1.3E-40 T 15-10-2018 THII_1026 8232e403c2769016cb6df0014e52b499 346 Gene3D G3DSA:3.30.70.1400 47 134 1.3E-40 T 15-10-2018 THII_1026 8232e403c2769016cb6df0014e52b499 346 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 154 2.4E-19 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain THII_1026 8232e403c2769016cb6df0014e52b499 346 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 209 272 2.4E-27 T 15-10-2018 IPR017703 YgfZ/GcvT conserved site THII_1026 8232e403c2769016cb6df0014e52b499 346 PIRSF PIRSF006487 2 338 2.3E-20 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 THII_1026 8232e403c2769016cb6df0014e52b499 346 SUPERFAMILY SSF103025 22 263 9.58E-63 T 15-10-2018 THII_3521 b8718c411e0b77d654d47e795a46aae1 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 15-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 THII_3521 b8718c411e0b77d654d47e795a46aae1 477 SUPERFAMILY SSF89095 296 402 2.49E-35 T 15-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 THII_3521 b8718c411e0b77d654d47e795a46aae1 477 Gene3D G3DSA:1.10.10.410 415 477 1.2E-27 T 15-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal THII_3521 b8718c411e0b77d654d47e795a46aae1 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 475 1.7E-180 T 15-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 THII_3521 b8718c411e0b77d654d47e795a46aae1 477 Gene3D G3DSA:1.10.150.380 296 414 3.5E-35 T 15-10-2018 THII_3521 b8718c411e0b77d654d47e795a46aae1 477 Pfam PF02637 GatB domain 328 475 1.7E-55 T 15-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 THII_3521 b8718c411e0b77d654d47e795a46aae1 477 Pfam PF02934 GatB/GatE catalytic domain 5 287 3.9E-112 T 15-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 THII_3521 b8718c411e0b77d654d47e795a46aae1 477 SUPERFAMILY SSF55931 4 295 1.11E-120 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 THII_3521 b8718c411e0b77d654d47e795a46aae1 477 SMART SM00845 327 475 3.9E-82 T 15-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 THII_3521 b8718c411e0b77d654d47e795a46aae1 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 476 39.059 T 15-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 THII_0554 a01521718f7ab32addaeb17af8c68159 676 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 534 1.6E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0554 a01521718f7ab32addaeb17af8c68159 676 SUPERFAMILY SSF55874 352 533 7.07E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0554 a01521718f7ab32addaeb17af8c68159 676 Gene3D G3DSA:1.20.120.160 11 150 8.9E-21 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_0554 a01521718f7ab32addaeb17af8c68159 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 532 1.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0554 a01521718f7ab32addaeb17af8c68159 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 513 1.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0554 a01521718f7ab32addaeb17af8c68159 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 1.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0554 a01521718f7ab32addaeb17af8c68159 676 SMART SM00260 527 667 5.3E-24 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_0554 a01521718f7ab32addaeb17af8c68159 676 Gene3D G3DSA:2.40.50.180 558 622 9.5E-29 T 15-10-2018 THII_0554 a01521718f7ab32addaeb17af8c68159 676 Gene3D G3DSA:3.30.565.10 350 534 3.3E-53 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0554 a01521718f7ab32addaeb17af8c68159 676 SUPERFAMILY SSF47384 283 350 4.32E-8 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0554 a01521718f7ab32addaeb17af8c68159 676 Gene3D G3DSA:1.10.287.560 282 349 8.5E-9 T 15-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 THII_0554 a01521718f7ab32addaeb17af8c68159 676 Pfam PF01584 CheW-like domain 541 668 3.4E-16 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_0554 a01521718f7ab32addaeb17af8c68159 676 SMART SM00387 394 535 6.5E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0554 a01521718f7ab32addaeb17af8c68159 676 SUPERFAMILY SSF47226 13 125 1.7E-17 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_0554 a01521718f7ab32addaeb17af8c68159 676 SMART SM01231 282 349 4.9E-9 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 THII_0554 a01521718f7ab32addaeb17af8c68159 676 Pfam PF01627 Hpt domain 15 109 1.2E-11 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_0554 a01521718f7ab32addaeb17af8c68159 676 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 283 348 3.3E-10 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 THII_0554 a01521718f7ab32addaeb17af8c68159 676 SMART SM00073 12 113 4.1E-6 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_0554 a01521718f7ab32addaeb17af8c68159 676 SUPERFAMILY SSF50341 534 666 3.79E-25 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_0554 a01521718f7ab32addaeb17af8c68159 676 Gene3D G3DSA:2.30.30.40 535 663 9.5E-29 T 15-10-2018 THII_2003 ab684db29e3c89e5f20ba2811f07bc14 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 92 1.0E-20 T 15-10-2018 IPR007711 Toxin HigB-1 THII_2003 ab684db29e3c89e5f20ba2811f07bc14 92 SUPERFAMILY SSF143011 1 92 9.03E-15 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2003 ab684db29e3c89e5f20ba2811f07bc14 92 Gene3D G3DSA:3.30.2310.20 1 92 1.9E-36 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1126 14c8b435af772c23766f079bf395a4a2 212 Gene3D G3DSA:3.40.50.410 8 168 8.6E-22 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_1126 14c8b435af772c23766f079bf395a4a2 212 SMART SM00327 5 180 1.4E-14 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_1126 14c8b435af772c23766f079bf395a4a2 212 SUPERFAMILY SSF53300 7 160 1.09E-24 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_1126 14c8b435af772c23766f079bf395a4a2 212 PIRSF PIRSF020634 3 211 2.3E-58 T 15-10-2018 IPR011392 Tellurite resistance, TerY THII_1126 14c8b435af772c23766f079bf395a4a2 212 Pfam PF00092 von Willebrand factor type A domain 8 155 1.5E-14 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_1179 d318e0c9b3af94bd0d590e68c3d05a17 308 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 180 1.4E-55 T 15-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 THII_1179 d318e0c9b3af94bd0d590e68c3d05a17 308 SUPERFAMILY SSF55120 10 238 1.34E-75 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1179 d318e0c9b3af94bd0d590e68c3d05a17 308 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 306 17.822 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1179 d318e0c9b3af94bd0d590e68c3d05a17 308 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 210 5.6E-75 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1179 d318e0c9b3af94bd0d590e68c3d05a17 308 Gene3D G3DSA:3.30.2350.10 2 240 3.2E-85 T 15-10-2018 THII_1179 d318e0c9b3af94bd0d590e68c3d05a17 308 SUPERFAMILY SSF88697 242 307 2.24E-10 T 15-10-2018 IPR015947 PUA-like superfamily THII_1179 d318e0c9b3af94bd0d590e68c3d05a17 308 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 239 1.2E-16 T 15-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 THII_1179 d318e0c9b3af94bd0d590e68c3d05a17 308 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 243 306 4.1E-14 T 15-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_1179 d318e0c9b3af94bd0d590e68c3d05a17 308 Gene3D G3DSA:2.30.130.10 241 307 2.3E-19 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 THII_1001 1cbc5c89d6226861e10793681a5e1f19 136 Pfam PF03400 IS1 transposase 4 129 5.7E-24 T 15-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 THII_1001 1cbc5c89d6226861e10793681a5e1f19 136 SUPERFAMILY SSF53098 13 133 5.12E-6 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_2651 12951ba02e5360091ef890d136083996 290 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 282 3.2E-62 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 THII_2651 12951ba02e5360091ef890d136083996 290 Pfam PF01545 Cation efflux family 12 198 9.8E-40 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 THII_2651 12951ba02e5360091ef890d136083996 290 SUPERFAMILY SSF160240 211 282 2.75E-9 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 THII_2651 12951ba02e5360091ef890d136083996 290 Gene3D G3DSA:1.20.1510.10 9 200 4.7E-38 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily THII_2651 12951ba02e5360091ef890d136083996 290 SUPERFAMILY SSF161111 10 201 1.96E-45 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily THII_2275 b30612b7afeba1ec004b53fdac396ad1 413 Gene3D G3DSA:3.40.1480.10 238 411 5.8E-44 T 15-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily THII_2275 b30612b7afeba1ec004b53fdac396ad1 413 SUPERFAMILY SSF82544 10 410 2.22E-100 T 15-10-2018 THII_2275 b30612b7afeba1ec004b53fdac396ad1 413 Pfam PF05161 MOFRL family 302 406 8.5E-30 T 15-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 THII_2275 b30612b7afeba1ec004b53fdac396ad1 413 Pfam PF13660 Domain of unknown function (DUF4147) 17 216 8.2E-50 T 15-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 THII_2275 b30612b7afeba1ec004b53fdac396ad1 413 Gene3D G3DSA:3.40.50.10180 29 229 1.4E-53 T 15-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 Pfam PF00512 His Kinase A (phospho-acceptor) domain 156 220 7.5E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 357 8.8E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 376 8.8E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 335 8.8E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 321 8.8E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 Gene3D G3DSA:3.30.565.10 227 377 9.1E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 Gene3D G3DSA:3.40.50.2300 6 142 3.5E-39 T 15-10-2018 THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 SMART SM00387 269 378 7.5E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 Gene3D G3DSA:1.10.287.130 143 226 3.2E-10 T 15-10-2018 THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 SUPERFAMILY SSF47384 144 224 3.73E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 Pfam PF00072 Response regulator receiver domain 12 122 1.7E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 SUPERFAMILY SSF52172 10 149 2.85E-40 T 15-10-2018 IPR011006 CheY-like superfamily THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 SMART SM00388 155 225 2.4E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 SUPERFAMILY SSF55874 223 377 1.31E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 273 377 3.5E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1396 8bee4e141950b2dfdbc2f05efb18a2ca 378 SMART SM00448 9 122 5.4E-41 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3341 2d0eb284d9ce1f1fb15cd3e981050c12 51 Pfam PF00471 Ribosomal protein L33 4 49 3.9E-18 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3341 2d0eb284d9ce1f1fb15cd3e981050c12 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.104 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3341 2d0eb284d9ce1f1fb15cd3e981050c12 51 SUPERFAMILY SSF57829 1 49 1.22E-18 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 THII_3341 2d0eb284d9ce1f1fb15cd3e981050c12 51 Gene3D G3DSA:2.20.28.120 1 51 2.5E-28 T 15-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3341 2d0eb284d9ce1f1fb15cd3e981050c12 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 1.4E-23 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3341 2d0eb284d9ce1f1fb15cd3e981050c12 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 15-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0744 40416e7e299a47f214a083ea26e2f63c 388 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 24 265 2.8E-14 T 15-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 THII_0744 40416e7e299a47f214a083ea26e2f63c 388 SUPERFAMILY SSF52266 24 273 1.63E-22 T 15-10-2018 THII_0744 40416e7e299a47f214a083ea26e2f63c 388 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 24 35 - T 15-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 THII_0744 40416e7e299a47f214a083ea26e2f63c 388 Gene3D G3DSA:3.40.50.1110 19 275 9.9E-76 T 15-10-2018 IPR036514 SGNH hydrolase superfamily THII_1814 4285e89435b7873998de0502804e81b4 463 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 37 44 - T 15-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 THII_1814 4285e89435b7873998de0502804e81b4 463 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 3 432 1.6E-186 T 15-10-2018 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0009399|GO:0065003 THII_1814 4285e89435b7873998de0502804e81b4 463 SUPERFAMILY SSF53807 7 438 5.23E-119 T 15-10-2018 THII_1814 4285e89435b7873998de0502804e81b4 463 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 19 431 1.0E-109 T 15-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 THII_1814 4285e89435b7873998de0502804e81b4 463 Gene3D G3DSA:3.40.50.1980 165 286 4.3E-40 T 15-10-2018 THII_1814 4285e89435b7873998de0502804e81b4 463 Gene3D G3DSA:3.40.50.1980 19 161 8.9E-37 T 15-10-2018 THII_1814 4285e89435b7873998de0502804e81b4 463 Gene3D G3DSA:3.40.50.1980 313 434 2.6E-35 T 15-10-2018 THII_2050 a713e6a11301fbf21a3e731b3508654b 944 SMART SM01058 818 906 2.4E-6 T 15-10-2018 IPR003711 CarD-like/TRCF domain THII_2050 a713e6a11301fbf21a3e731b3508654b 944 SUPERFAMILY SSF141259 817 881 1.24E-11 T 15-10-2018 IPR036101 CarD-like/TRCF domain superfamily THII_2050 a713e6a11301fbf21a3e731b3508654b 944 Gene3D G3DSA:2.30.30.840 822 875 5.4E-11 T 15-10-2018 THII_2050 a713e6a11301fbf21a3e731b3508654b 944 Pfam PF02559 CarD-like/TRCF domain 819 889 8.1E-10 T 15-10-2018 IPR003711 CarD-like/TRCF domain THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 SUPERFAMILY SSF47384 268 350 1.22E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 SMART SM00388 283 349 9.5E-26 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 546 2.0E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 Gene3D G3DSA:1.20.1480.50 162 255 6.4E-14 T 15-10-2018 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 SMART SM00387 395 548 2.5E-33 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 Gene3D G3DSA:3.30.565.10 350 548 2.9E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 349 5.9E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 SMART SM00448 571 684 3.7E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 SMART SM00304 198 250 5.6E-13 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 SUPERFAMILY SSF52172 571 697 1.85E-33 T 15-10-2018 IPR011006 CheY-like superfamily THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 SUPERFAMILY SSF55874 338 519 2.62E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 SUPERFAMILY SSF103190 51 172 3.26E-6 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 SUPERFAMILY SSF158472 198 249 1.12E-9 T 15-10-2018 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 484 2.5E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 508 2.5E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 470 2.5E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 Pfam PF00072 Response regulator receiver domain 573 684 7.5E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 Gene3D G3DSA:3.40.50.12740 571 762 1.8E-36 T 15-10-2018 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 Pfam PF00672 HAMP domain 198 247 7.8E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 Gene3D G3DSA:1.10.287.130 269 349 2.7E-28 T 15-10-2018 THII_0268 78cf710c2afa7b1ba7a67632ae5398d8 767 Pfam PF17203 Single cache domain 3 36 174 2.6E-9 T 15-10-2018 IPR033463 Single cache domain 3 THII_1019 846e3274facb5d2542722f6df9ffa613 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 229 243 8.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1019 846e3274facb5d2542722f6df9ffa613 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 247 257 8.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1019 846e3274facb5d2542722f6df9ffa613 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 264 282 8.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1019 846e3274facb5d2542722f6df9ffa613 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 301 8.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1019 846e3274facb5d2542722f6df9ffa613 591 Gene3D G3DSA:1.10.287.130 27 126 5.7E-30 T 15-10-2018 THII_1019 846e3274facb5d2542722f6df9ffa613 591 Gene3D G3DSA:3.40.50.2300 321 438 2.1E-7 T 15-10-2018 THII_1019 846e3274facb5d2542722f6df9ffa613 591 SUPERFAMILY SSF52172 462 585 1.71E-38 T 15-10-2018 IPR011006 CheY-like superfamily THII_1019 846e3274facb5d2542722f6df9ffa613 591 Gene3D G3DSA:3.30.565.10 127 306 9.8E-55 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1019 846e3274facb5d2542722f6df9ffa613 591 Pfam PF00512 His Kinase A (phospho-acceptor) domain 63 128 8.3E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1019 846e3274facb5d2542722f6df9ffa613 591 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 176 301 4.0E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1019 846e3274facb5d2542722f6df9ffa613 591 Gene3D G3DSA:3.40.50.2300 452 586 3.4E-41 T 15-10-2018 THII_1019 846e3274facb5d2542722f6df9ffa613 591 Pfam PF00072 Response regulator receiver domain 466 579 4.8E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1019 846e3274facb5d2542722f6df9ffa613 591 SUPERFAMILY SSF55874 117 300 1.83E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1019 846e3274facb5d2542722f6df9ffa613 591 SUPERFAMILY SSF52172 322 435 1.42E-8 T 15-10-2018 IPR011006 CheY-like superfamily THII_1019 846e3274facb5d2542722f6df9ffa613 591 SUPERFAMILY SSF47384 49 129 4.9E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1019 846e3274facb5d2542722f6df9ffa613 591 SMART SM00448 464 579 3.3E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1019 846e3274facb5d2542722f6df9ffa613 591 SMART SM00388 63 128 2.2E-26 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1019 846e3274facb5d2542722f6df9ffa613 591 SMART SM00387 175 304 1.8E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2796 123dd2cf6ada9fe2dd96ac806e301a04 468 Gene3D G3DSA:3.40.50.12780 9 372 8.0E-47 T 15-10-2018 THII_2796 123dd2cf6ada9fe2dd96ac806e301a04 468 Pfam PF00501 AMP-binding enzyme 120 374 1.8E-40 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 THII_2796 123dd2cf6ada9fe2dd96ac806e301a04 468 Pfam PF13193 AMP-binding enzyme C-terminal domain 385 459 7.5E-10 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain THII_2796 123dd2cf6ada9fe2dd96ac806e301a04 468 SUPERFAMILY SSF56801 20 467 1.7E-77 T 15-10-2018 THII_2796 123dd2cf6ada9fe2dd96ac806e301a04 468 Gene3D G3DSA:3.30.300.30 373 468 5.8E-19 T 15-10-2018 THII_2796 123dd2cf6ada9fe2dd96ac806e301a04 468 ProSitePatterns PS00455 Putative AMP-binding domain signature. 141 152 - T 15-10-2018 IPR020845 AMP-binding, conserved site THII_3786 d1f30a67de86582c5a3f97e8ada6b5eb 290 SMART SM00028 137 179 500.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3786 d1f30a67de86582c5a3f97e8ada6b5eb 290 SMART SM00028 17 50 170.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3786 d1f30a67de86582c5a3f97e8ada6b5eb 290 SMART SM00028 93 136 6.1 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3786 d1f30a67de86582c5a3f97e8ada6b5eb 290 SMART SM00028 180 213 0.4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3786 d1f30a67de86582c5a3f97e8ada6b5eb 290 SMART SM00028 51 92 34.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3786 d1f30a67de86582c5a3f97e8ada6b5eb 290 Gene3D G3DSA:1.25.40.10 23 110 8.9E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3786 d1f30a67de86582c5a3f97e8ada6b5eb 290 Gene3D G3DSA:1.25.40.10 111 234 4.3E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3786 d1f30a67de86582c5a3f97e8ada6b5eb 290 SUPERFAMILY SSF48439 9 240 2.41E-28 T 15-10-2018 THII_3786 d1f30a67de86582c5a3f97e8ada6b5eb 290 Pfam PF13181 Tetratricopeptide repeat 116 136 0.013 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3867 86efc5144840e5c03013a94dda3fd7b1 80 PIRSF PIRSF029827 1 80 7.3E-38 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 THII_3867 86efc5144840e5c03013a94dda3fd7b1 80 SUPERFAMILY SSF111148 1 78 2.88E-37 T 15-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 THII_3867 86efc5144840e5c03013a94dda3fd7b1 80 Gene3D G3DSA:1.10.3880.10 1 80 1.3E-37 T 15-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 THII_3867 86efc5144840e5c03013a94dda3fd7b1 80 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 6.0E-30 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 THII_3867 86efc5144840e5c03013a94dda3fd7b1 80 Pfam PF04362 Bacterial Fe(2+) trafficking 1 79 3.1E-40 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 THII_3867 86efc5144840e5c03013a94dda3fd7b1 80 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 80 24.177 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 THII_1429 3669249af426ecdc6ac5573cd9819f11 203 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 1.8E-33 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel THII_2511 1034e4b6bc3e6502c06f6bafededb551 188 Gene3D G3DSA:3.10.450.50 23 156 3.1E-7 T 15-10-2018 THII_2511 1034e4b6bc3e6502c06f6bafededb551 188 Pfam PF12883 Protein of unknown function (DUF3828) 62 157 6.1E-10 T 15-10-2018 IPR024289 Domain of unknown function DUF3828 THII_0999 8c9061e0428ba8c42605a65d867d4859 705 SUPERFAMILY SSF69349 432 644 8.63E-49 T 15-10-2018 THII_0999 8c9061e0428ba8c42605a65d867d4859 705 Gene3D G3DSA:2.30.110.50 17 329 4.4E-110 T 15-10-2018 THII_0999 8c9061e0428ba8c42605a65d867d4859 705 SUPERFAMILY SSF69279 13 190 2.15E-60 T 15-10-2018 THII_0999 8c9061e0428ba8c42605a65d867d4859 705 Gene3D G3DSA:2.40.50.230 345 447 8.4E-44 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily THII_0999 8c9061e0428ba8c42605a65d867d4859 705 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 13 512 1.5E-189 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset THII_0999 8c9061e0428ba8c42605a65d867d4859 705 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 509 532 1.9E-5 T 15-10-2018 IPR010609 Gp5, C-terminal THII_0999 8c9061e0428ba8c42605a65d867d4859 705 Gene3D G3DSA:3.55.50.10 101 194 4.4E-110 T 15-10-2018 THII_0999 8c9061e0428ba8c42605a65d867d4859 705 SUPERFAMILY SSF69255 354 442 4.45E-33 T 15-10-2018 THII_0999 8c9061e0428ba8c42605a65d867d4859 705 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 27 494 5.0E-139 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein THII_0999 8c9061e0428ba8c42605a65d867d4859 705 SUPERFAMILY SSF69279 197 354 3.23E-30 T 15-10-2018 THII_0999 8c9061e0428ba8c42605a65d867d4859 705 Pfam PF05954 Phage late control gene D protein (GPD) 33 328 7.6E-87 T 15-10-2018 THII_0999 8c9061e0428ba8c42605a65d867d4859 705 Gene3D G3DSA:3.30.1920.30 229 287 4.4E-110 T 15-10-2018 THII_1053 3553504379e338122b31c55715cf89a7 243 SUPERFAMILY SSF81606 13 240 5.62E-9 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_1053 3553504379e338122b31c55715cf89a7 243 Pfam PF13672 Protein phosphatase 2C 21 209 3.9E-7 T 15-10-2018 THII_0594 5f77513b531536564fb8e85dbbdfb8bf 430 Gene3D G3DSA:3.40.1190.10 1 296 1.2E-80 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_0594 5f77513b531536564fb8e85dbbdfb8bf 430 Gene3D G3DSA:3.90.190.20 297 430 2.4E-28 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_0594 5f77513b531536564fb8e85dbbdfb8bf 430 SUPERFAMILY SSF53623 4 294 3.55E-83 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_0594 5f77513b531536564fb8e85dbbdfb8bf 430 SUPERFAMILY SSF53244 295 427 8.97E-29 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_0594 5f77513b531536564fb8e85dbbdfb8bf 430 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 45 68 - T 15-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 THII_0594 5f77513b531536564fb8e85dbbdfb8bf 430 Pfam PF08245 Mur ligase middle domain 47 271 3.2E-8 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 THII_0594 5f77513b531536564fb8e85dbbdfb8bf 430 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 427 5.3E-92 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 THII_0594 5f77513b531536564fb8e85dbbdfb8bf 430 PIRSF PIRSF001563 1 430 6.7E-101 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 Gene3D G3DSA:3.30.450.20 280 407 4.2E-21 T 15-10-2018 THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 Gene3D G3DSA:3.20.20.450 889 1139 1.7E-98 T 15-10-2018 IPR035919 EAL domain superfamily THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 SUPERFAMILY SSF55785 565 694 1.69E-13 T 15-10-2018 IPR035965 PAS domain superfamily THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 SUPERFAMILY SSF141868 892 1137 1.7E-90 T 15-10-2018 IPR035919 EAL domain superfamily THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 Pfam PF17159 Membrane-associated sensor domain 41 267 6.7E-46 T 15-10-2018 IPR033425 Membrane-associated sensor domain MASE3 THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 SMART SM00267 700 875 4.6E-64 T 15-10-2018 IPR000160 GGDEF domain THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 Pfam PF00990 Diguanylate cyclase, GGDEF domain 714 870 1.6E-50 T 15-10-2018 IPR000160 GGDEF domain THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 SUPERFAMILY SSF55073 719 876 7.22E-50 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 Pfam PF08448 PAS fold 585 698 3.8E-12 T 15-10-2018 IPR013656 PAS fold-4 THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 Gene3D G3DSA:3.30.450.40 408 566 3.0E-5 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 SMART SM00086 654 696 19.0 T 15-10-2018 IPR001610 PAC motif THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 SMART SM00086 366 409 1.7E-4 T 15-10-2018 IPR001610 PAC motif THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 Pfam PF08447 PAS fold 319 402 1.1E-12 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 SUPERFAMILY SSF55785 310 410 6.81E-17 T 15-10-2018 IPR035965 PAS domain superfamily THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 711 873 6.4E-41 T 15-10-2018 IPR000160 GGDEF domain THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 Gene3D G3DSA:3.30.70.270 709 888 7.8E-64 T 15-10-2018 THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 SUPERFAMILY SSF55781 434 574 1.33E-7 T 15-10-2018 THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 SMART SM00052 885 1130 2.0E-119 T 15-10-2018 IPR001633 EAL domain THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 286 416 1.4E-8 T 15-10-2018 IPR000014 PAS domain THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 Gene3D G3DSA:3.30.450.20 567 708 3.5E-15 T 15-10-2018 THII_1364 d6890a6acb84caeb4ba8a36ab5b16293 1140 Pfam PF00563 EAL domain 892 1125 6.5E-69 T 15-10-2018 IPR001633 EAL domain THII_2827 d9e7e8a8fc8909dbc159e2304b0ca666 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 96 22.868 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family THII_2827 d9e7e8a8fc8909dbc159e2304b0ca666 107 Pfam PF02575 YbaB/EbfC DNA-binding family 9 97 3.1E-34 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family THII_2827 d9e7e8a8fc8909dbc159e2304b0ca666 107 SUPERFAMILY SSF82607 9 101 9.42E-35 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily THII_2827 d9e7e8a8fc8909dbc159e2304b0ca666 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 98 5.4E-33 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family THII_2827 d9e7e8a8fc8909dbc159e2304b0ca666 107 Gene3D G3DSA:3.30.1310.10 1 107 7.9E-44 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily THII_2827 d9e7e8a8fc8909dbc159e2304b0ca666 107 PIRSF PIRSF004555 1 107 2.3E-37 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family THII_1585 c73c4922515dced8603660d6174897fd 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 488 2.9E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1585 c73c4922515dced8603660d6174897fd 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 2.9E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1585 c73c4922515dced8603660d6174897fd 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 2.9E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1585 c73c4922515dced8603660d6174897fd 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 2.9E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1585 c73c4922515dced8603660d6174897fd 491 SMART SM00387 379 491 2.2E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1585 c73c4922515dced8603660d6174897fd 491 Gene3D G3DSA:3.30.565.10 336 490 9.5E-34 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1585 c73c4922515dced8603660d6174897fd 491 Gene3D G3DSA:1.10.287.130 227 329 2.3E-19 T 15-10-2018 THII_1585 c73c4922515dced8603660d6174897fd 491 SUPERFAMILY SSF55874 339 487 4.71E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1585 c73c4922515dced8603660d6174897fd 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 383 489 9.8E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1585 c73c4922515dced8603660d6174897fd 491 SUPERFAMILY SSF158472 170 218 2.48E-5 T 15-10-2018 THII_2843 9fc047e42e9cda2761cc4c189a6a8568 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2843 9fc047e42e9cda2761cc4c189a6a8568 145 Gene3D G3DSA:3.30.700.10 33 142 3.5E-38 T 15-10-2018 THII_2843 9fc047e42e9cda2761cc4c189a6a8568 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 4.1E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2843 9fc047e42e9cda2761cc4c189a6a8568 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 143 2.0E-57 T 15-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 THII_2843 9fc047e42e9cda2761cc4c189a6a8568 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 3.1E-18 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 THII_2843 9fc047e42e9cda2761cc4c189a6a8568 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 3.1E-18 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 THII_2843 9fc047e42e9cda2761cc4c189a6a8568 145 Pfam PF08334 Type II secretion system (T2SS), protein G 33 142 7.6E-40 T 15-10-2018 IPR013545 Type II secretion system protein G THII_2843 9fc047e42e9cda2761cc4c189a6a8568 145 SUPERFAMILY SSF54523 37 143 3.71E-38 T 15-10-2018 THII_2843 9fc047e42e9cda2761cc4c189a6a8568 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 30 3.3E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0905 a05e3b9779847e6e01921b861c792018 807 Gene3D G3DSA:3.40.50.200 256 624 9.7E-31 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_0905 a05e3b9779847e6e01921b861c792018 807 Pfam PF00082 Subtilase family 263 588 2.5E-25 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 THII_0905 a05e3b9779847e6e01921b861c792018 807 SUPERFAMILY SSF52743 259 629 8.38E-32 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_0905 a05e3b9779847e6e01921b861c792018 807 PRINTS PR00723 Subtilisin serine protease family (S8) signature 259 278 7.0E-8 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_0905 a05e3b9779847e6e01921b861c792018 807 PRINTS PR00723 Subtilisin serine protease family (S8) signature 297 310 7.0E-8 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_0905 a05e3b9779847e6e01921b861c792018 807 PRINTS PR00723 Subtilisin serine protease family (S8) signature 550 566 7.0E-8 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SUPERFAMILY SSF55781 746 913 3.64E-24 T 15-10-2018 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Gene3D G3DSA:3.40.50.12740 1581 1701 4.5E-44 T 15-10-2018 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SUPERFAMILY SSF47384 1005 1087 1.12E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SMART SM00304 700 752 72.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SMART SM00304 609 662 3.0E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SMART SM00448 1435 1550 0.14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SMART SM00448 1582 1696 1.1E-41 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SMART SM00448 1313 1423 8.6E-17 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SUPERFAMILY SSF55874 1075 1254 2.23E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1954 4697d6c56b502401a2b970882b17d45e 1702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1217 1235 4.4E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1200 1210 4.4E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1182 1196 4.4E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1241 1254 4.4E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Gene3D G3DSA:1.10.287.130 980 1084 2.9E-26 T 15-10-2018 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Gene3D G3DSA:3.40.50.2300 1431 1573 1.7E-10 T 15-10-2018 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Gene3D G3DSA:3.40.50.2300 1299 1429 4.1E-22 T 15-10-2018 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SMART SM00065 776 922 4.7E-6 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Gene3D G3DSA:3.30.450.40 748 917 3.7E-17 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1019 1086 9.7E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Pfam PF16591 Helical bimodular sensor domain 29 142 1.4E-9 T 15-10-2018 IPR032255 Helical bimodular sensor domain THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SMART SM01358 29 294 2.4E-17 T 15-10-2018 IPR032255 Helical bimodular sensor domain THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SMART SM01358 318 587 1.6E-13 T 15-10-2018 IPR032255 Helical bimodular sensor domain THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Pfam PF00072 Response regulator receiver domain 1316 1422 7.8E-15 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Pfam PF00072 Response regulator receiver domain 1585 1696 4.1E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Pfam PF00072 Response regulator receiver domain 1438 1548 3.5E-9 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SMART SM00387 1133 1257 2.3E-34 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Gene3D G3DSA:1.20.1480.50 568 668 9.6E-12 T 15-10-2018 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SMART SM00388 1018 1086 1.5E-22 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SUPERFAMILY SSF158472 609 661 1.31E-7 T 15-10-2018 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Gene3D G3DSA:3.30.565.10 1085 1258 2.3E-52 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1133 1255 6.2E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SUPERFAMILY SSF52172 1580 1700 9.39E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_1954 4697d6c56b502401a2b970882b17d45e 1702 Pfam PF13185 GAF domain 775 912 3.5E-12 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SUPERFAMILY SSF52172 1309 1426 1.21E-21 T 15-10-2018 IPR011006 CheY-like superfamily THII_1954 4697d6c56b502401a2b970882b17d45e 1702 SUPERFAMILY SSF52172 1436 1559 2.56E-11 T 15-10-2018 IPR011006 CheY-like superfamily THII_0595 8b1069fbf4b5969c5bb829251a78c5b2 417 PIRSF PIRSF000412 1 413 2.9E-168 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 THII_0595 8b1069fbf4b5969c5bb829251a78c5b2 417 Pfam PF00464 Serine hydroxymethyltransferase 9 386 7.6E-183 T 15-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 THII_0595 8b1069fbf4b5969c5bb829251a78c5b2 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.176 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 THII_0595 8b1069fbf4b5969c5bb829251a78c5b2 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 15-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 THII_0595 8b1069fbf4b5969c5bb829251a78c5b2 417 SUPERFAMILY SSF53383 7 416 1.38E-181 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_0595 8b1069fbf4b5969c5bb829251a78c5b2 417 Gene3D G3DSA:3.90.1150.10 10 394 8.7E-188 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_0595 8b1069fbf4b5969c5bb829251a78c5b2 417 Gene3D G3DSA:3.40.640.10 37 289 8.7E-188 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 Pfam PF13424 Tetratricopeptide repeat 224 293 6.4E-9 T 15-10-2018 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 Pfam PF13424 Tetratricopeptide repeat 303 373 7.0E-9 T 15-10-2018 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 Gene3D G3DSA:1.25.40.10 33 161 6.0E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 Gene3D G3DSA:1.25.40.10 168 298 1.4E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 SUPERFAMILY SSF48452 42 253 1.1E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 SMART SM00028 224 257 33.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 SMART SM00028 184 217 0.0053 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 SMART SM00028 343 376 0.059 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 SMART SM00028 383 416 61.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 SMART SM00028 264 297 33.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 SMART SM00028 66 99 0.0014 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 SMART SM00028 301 334 2.1 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 Pfam PF12770 CHAT domain 579 656 2.8E-9 T 15-10-2018 IPR024983 CHAT domain THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 Pfam PF13181 Tetratricopeptide repeat 66 99 8.7E-5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 Gene3D G3DSA:1.25.40.10 299 448 9.5E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 SUPERFAMILY SSF48452 248 417 5.18E-23 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 Pfam PF13176 Tetratricopeptide repeat 187 212 6.5E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1006 fa6246834aeb2d09899e4fbe011aa583 777 Pfam PF13176 Tetratricopeptide repeat 386 415 0.033 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1334 549d0057619b7ca6f292f3b0c53c25fa 258 Pfam PF00977 Histidine biosynthesis protein 6 240 1.7E-92 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 THII_1334 549d0057619b7ca6f292f3b0c53c25fa 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 48.722 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 THII_1334 549d0057619b7ca6f292f3b0c53c25fa 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 256 3.5E-118 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 THII_1334 549d0057619b7ca6f292f3b0c53c25fa 258 Gene3D G3DSA:3.20.20.70 1 258 1.1E-111 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_1334 549d0057619b7ca6f292f3b0c53c25fa 258 SUPERFAMILY SSF51366 3 256 3.3E-84 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 THII_2566 75737842defdd4bcc99494873fe24aa7 207 Pfam PF04205 FMN-binding domain 107 196 7.6E-19 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 THII_2566 75737842defdd4bcc99494873fe24aa7 207 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 14 201 24.829 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 THII_2566 75737842defdd4bcc99494873fe24aa7 207 PIRSF PIRSF006091 8 207 3.1E-66 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 THII_2566 75737842defdd4bcc99494873fe24aa7 207 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 22 200 2.4E-59 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 THII_2566 75737842defdd4bcc99494873fe24aa7 207 SMART SM00900 107 199 1.8E-34 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 Pfam PF00072 Response regulator receiver domain 379 488 2.0E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 SMART SM00448 377 488 1.0E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 1.1E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 1.1E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 SMART SM00388 137 201 1.7E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 SMART SM00387 248 381 2.8E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 SUPERFAMILY SSF55874 190 350 1.83E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 SUPERFAMILY SSF47384 122 202 1.35E-16 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 Gene3D G3DSA:3.40.50.12740 376 496 5.6E-37 T 15-10-2018 THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 Gene3D G3DSA:3.30.565.10 200 357 2.6E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 350 1.3E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 Gene3D G3DSA:1.10.287.130 101 199 2.3E-19 T 15-10-2018 THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 199 2.7E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1631 ac8a9c07ec86adba2183ef366ee4f53c 497 SUPERFAMILY SSF52172 378 493 2.13E-36 T 15-10-2018 IPR011006 CheY-like superfamily THII_1580 b204a02eeee8fb570ff098d347a36af0 412 SUPERFAMILY SSF46626 307 412 9.42E-17 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1580 b204a02eeee8fb570ff098d347a36af0 412 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 203 412 4.7E-45 T 15-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 THII_1580 b204a02eeee8fb570ff098d347a36af0 412 Gene3D G3DSA:1.10.760.10 64 173 2.9E-21 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1580 b204a02eeee8fb570ff098d347a36af0 412 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 89 167 2.5E-7 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1580 b204a02eeee8fb570ff098d347a36af0 412 Gene3D G3DSA:1.10.760.10 205 292 1.2E-55 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1580 b204a02eeee8fb570ff098d347a36af0 412 Gene3D G3DSA:1.10.760.10 196 411 1.2E-55 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1580 b204a02eeee8fb570ff098d347a36af0 412 SUPERFAMILY SSF46626 197 296 4.66E-9 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1580 b204a02eeee8fb570ff098d347a36af0 412 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 95 171 5.1E-19 T 15-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX THII_1580 b204a02eeee8fb570ff098d347a36af0 412 SUPERFAMILY SSF46626 79 172 5.81E-19 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 Gene3D G3DSA:3.50.50.60 10 312 1.8E-124 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.5E-79 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.5E-79 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.5E-79 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.5E-79 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.5E-79 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.5E-79 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.5E-79 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.5E-79 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 294 313 1.5E-79 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 313 9.7E-121 T 15-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 6.6E-39 T 15-10-2018 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 6.6E-39 T 15-10-2018 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 6.6E-39 T 15-10-2018 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.6E-39 T 15-10-2018 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 6.6E-39 T 15-10-2018 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 SUPERFAMILY SSF51905 3 313 1.57E-54 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 Gene3D G3DSA:3.50.50.60 118 244 1.8E-124 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 5.7E-48 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_1720 2c4b95e6743d05ec9a836b6308e57ee0 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 15-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 Gene3D G3DSA:3.50.50.60 161 282 1.7E-117 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 461 6.9E-38 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 333 5.8E-72 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 2.5E-78 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 2.5E-78 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 2.5E-78 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 2.5E-78 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.5E-78 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 2.5E-78 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.5E-78 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 59 2.5E-78 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.5E-78 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 Gene3D G3DSA:3.50.50.60 4 340 1.7E-117 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 470 2.1E-164 T 15-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 SUPERFAMILY SSF51905 3 342 9.43E-60 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 45 55 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 SUPERFAMILY SSF55424 349 470 3.95E-42 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PIRSF PIRSF000350 1 469 2.7E-88 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 Gene3D G3DSA:3.30.390.30 351 471 1.6E-45 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 3.2E-42 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 3.2E-42 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.2E-42 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 3.2E-42 T 15-10-2018 THII_3443 27a45f8675fe538217ea4ea5cc7c5bff 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 3.2E-42 T 15-10-2018 THII_0586 1a8b23e47a34d828d814197ed3f67fba 298 SUPERFAMILY SSF55112 1 144 1.15E-59 T 15-10-2018 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like superfamily THII_0586 1a8b23e47a34d828d814197ed3f67fba 298 Hamap MF_00579 Formylmethanofuran--tetrahydromethanopterin formyltransferase [ftr]. 1 297 43.55 T 15-10-2018 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr GO:0006730|GO:0030270 THII_0586 1a8b23e47a34d828d814197ed3f67fba 298 PIRSF PIRSF006414 1 298 5.8E-111 T 15-10-2018 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr GO:0006730|GO:0030270 THII_0586 1a8b23e47a34d828d814197ed3f67fba 298 SUPERFAMILY SSF55112 145 297 1.7E-53 T 15-10-2018 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like superfamily THII_0586 1a8b23e47a34d828d814197ed3f67fba 298 Gene3D G3DSA:3.30.70.520 3 296 8.4E-116 T 15-10-2018 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like superfamily THII_0586 1a8b23e47a34d828d814197ed3f67fba 298 TIGRFAM TIGR03119 one_C_fhcD: formylmethanofuran--tetrahydromethanopterin N-formyltransferase 8 296 7.6E-123 T 15-10-2018 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr GO:0006730|GO:0030270 THII_0586 1a8b23e47a34d828d814197ed3f67fba 298 Pfam PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase 1 143 3.3E-60 T 15-10-2018 IPR022667 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, N-terminal GO:0006730|GO:0016740 THII_0586 1a8b23e47a34d828d814197ed3f67fba 298 Pfam PF02741 FTR, proximal lobe 146 296 5.8E-57 T 15-10-2018 IPR002770 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, C-terminal GO:0006730|GO:0016740 THII_0586 1a8b23e47a34d828d814197ed3f67fba 298 Gene3D G3DSA:3.30.70.520 17 161 8.4E-116 T 15-10-2018 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like superfamily THII_0552 c00488091f48a7d1738ba374560e067b 692 SUPERFAMILY SSF58104 224 493 8.89E-56 T 15-10-2018 THII_0552 c00488091f48a7d1738ba374560e067b 692 SUPERFAMILY SSF58104 581 690 5.36E-7 T 15-10-2018 THII_0552 c00488091f48a7d1738ba374560e067b 692 SUPERFAMILY SSF58104 488 578 6.41E-5 T 15-10-2018 THII_0552 c00488091f48a7d1738ba374560e067b 692 Gene3D G3DSA:1.10.287.950 19 151 1.9E-8 T 15-10-2018 THII_0552 c00488091f48a7d1738ba374560e067b 692 Gene3D G3DSA:1.10.287.950 564 691 5.5E-7 T 15-10-2018 THII_0552 c00488091f48a7d1738ba374560e067b 692 Gene3D G3DSA:1.10.287.950 219 501 1.8E-57 T 15-10-2018 THII_0552 c00488091f48a7d1738ba374560e067b 692 SMART SM00283 236 497 1.4E-52 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_0552 c00488091f48a7d1738ba374560e067b 692 SUPERFAMILY SSF58104 23 251 3.92E-13 T 15-10-2018 THII_0552 c00488091f48a7d1738ba374560e067b 692 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 392 5.7E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_0552 c00488091f48a7d1738ba374560e067b 692 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 31 46 5.7E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_0552 c00488091f48a7d1738ba374560e067b 692 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 253 282 5.7E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_0552 c00488091f48a7d1738ba374560e067b 692 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 334 361 5.7E-22 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_0552 c00488091f48a7d1738ba374560e067b 692 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 281 459 1.4E-35 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_0552 c00488091f48a7d1738ba374560e067b 692 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 25 663 4.0E-8 T 15-10-2018 THII_1983 a2e1d223ca797f11fdf638eae6e87369 272 SMART SM00448 149 262 2.9E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1983 a2e1d223ca797f11fdf638eae6e87369 272 Pfam PF00072 Response regulator receiver domain 152 262 7.2E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1983 a2e1d223ca797f11fdf638eae6e87369 272 SUPERFAMILY SSF52172 147 267 2.13E-34 T 15-10-2018 IPR011006 CheY-like superfamily THII_1983 a2e1d223ca797f11fdf638eae6e87369 272 Gene3D G3DSA:3.40.50.12740 149 272 1.2E-35 T 15-10-2018 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 SMART SM00984 321 425 1.5E-51 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 297 2.5E-38 T 15-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 SUPERFAMILY SSF52413 307 436 1.83E-40 T 15-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 Gene3D G3DSA:3.40.50.720 236 445 5.1E-78 T 15-10-2018 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 321 425 4.1E-31 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 Gene3D G3DSA:1.20.5.100 204 235 7.5E-17 T 15-10-2018 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 PIRSF PIRSF500134 1 443 3.2E-188 T 15-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 180 3.8E-65 T 15-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 SUPERFAMILY SSF51735 1 196 3.14E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 PIRSF PIRSF000124 1 440 1.9E-154 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 421 5.0E-140 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 SUPERFAMILY SSF48179 204 299 9.52E-34 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 THII_1754 d3fcd2855329990c1f4e952b9cd36529 446 Gene3D G3DSA:3.40.50.720 1 203 1.1E-78 T 15-10-2018 THII_0644 9ad6bcdf70cf0df7fd1a6ddaed6f8adc 250 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 8 242 1.1E-95 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 THII_0644 9ad6bcdf70cf0df7fd1a6ddaed6f8adc 250 SUPERFAMILY SSF63892 7 244 2.75E-97 T 15-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 THII_0644 9ad6bcdf70cf0df7fd1a6ddaed6f8adc 250 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 8 241 1.3E-99 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 THII_0644 9ad6bcdf70cf0df7fd1a6ddaed6f8adc 250 Gene3D G3DSA:3.20.20.70 1 247 3.1E-103 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0644 9ad6bcdf70cf0df7fd1a6ddaed6f8adc 250 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 246 124.221 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 THII_0910 765b6632f3a43b2346fb9181ddde18d4 497 SUPERFAMILY SSF52540 43 251 4.07E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0910 765b6632f3a43b2346fb9181ddde18d4 497 Gene3D G3DSA:3.30.70.1070 389 489 4.6E-29 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 THII_0910 765b6632f3a43b2346fb9181ddde18d4 497 Pfam PF05036 Sporulation related domain 406 480 1.1E-6 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 THII_0910 765b6632f3a43b2346fb9181ddde18d4 497 Pfam PF13401 AAA domain 42 164 4.5E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0910 765b6632f3a43b2346fb9181ddde18d4 497 Gene3D G3DSA:3.40.50.300 25 174 1.3E-6 T 15-10-2018 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 SUPERFAMILY SSF56112 3 267 1.16E-58 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1670 1786 2.5E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1716 1730 9.1E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1772 1785 9.1E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1747 1765 9.1E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1734 1744 9.1E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 Gene3D G3DSA:1.10.510.10 94 280 1.8E-41 T 15-10-2018 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 SUPERFAMILY SSF55874 1620 1786 1.06E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 SUPERFAMILY SSF48452 946 1299 4.64E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 Gene3D G3DSA:3.30.565.10 1625 1788 2.3E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 SUPERFAMILY SSF55781 1325 1507 1.2E-23 T 15-10-2018 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 SUPERFAMILY SSF52540 298 573 4.24E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 SMART SM00065 1340 1502 5.0E-16 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 Gene3D G3DSA:3.30.450.40 1310 1515 3.8E-32 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 Pfam PF00069 Protein kinase domain 18 262 2.1E-37 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 SMART SM00387 1667 1788 3.2E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 Gene3D G3DSA:1.10.287.130 1518 1619 1.1E-19 T 15-10-2018 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 Gene3D G3DSA:3.30.200.20 2 87 2.3E-10 T 15-10-2018 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 Pfam PF13191 AAA ATPase domain 301 489 3.3E-46 T 15-10-2018 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 Pfam PF13185 GAF domain 1341 1493 1.9E-13 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_3790 1652d9b57ac8a0e7506e370ca292dea3 1788 Gene3D G3DSA:3.40.50.300 294 496 5.6E-10 T 15-10-2018 THII_0036 cd0cfe0bd95e36b944061a99516dcbab 96 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.4E-18 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0036 cd0cfe0bd95e36b944061a99516dcbab 96 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.4E-18 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0036 cd0cfe0bd95e36b944061a99516dcbab 96 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.4E-18 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0036 cd0cfe0bd95e36b944061a99516dcbab 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 THII_0036 cd0cfe0bd95e36b944061a99516dcbab 96 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.2E-31 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0036 cd0cfe0bd95e36b944061a99516dcbab 96 SMART SM00411 1 91 6.5E-45 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0036 cd0cfe0bd95e36b944061a99516dcbab 96 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.213 T 15-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 THII_0036 cd0cfe0bd95e36b944061a99516dcbab 96 SUPERFAMILY SSF47729 1 91 4.86E-32 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 THII_0036 cd0cfe0bd95e36b944061a99516dcbab 96 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 6.4E-47 T 15-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 THII_0036 cd0cfe0bd95e36b944061a99516dcbab 96 Gene3D G3DSA:4.10.520.10 2 39 2.6E-6 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 THII_0036 cd0cfe0bd95e36b944061a99516dcbab 96 Gene3D G3DSA:4.10.520.10 40 95 2.0E-27 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 THII_2975 859f1fd930795661b4cc39573392cfaa 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 199 4.2E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2975 859f1fd930795661b4cc39573392cfaa 361 Gene3D G3DSA:3.40.50.2300 1 126 1.4E-33 T 15-10-2018 THII_2975 859f1fd930795661b4cc39573392cfaa 361 SUPERFAMILY SSF52172 1 168 1.99E-40 T 15-10-2018 IPR011006 CheY-like superfamily THII_2975 859f1fd930795661b4cc39573392cfaa 361 SMART SM00387 247 356 1.3E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2975 859f1fd930795661b4cc39573392cfaa 361 SMART SM00448 4 117 1.2E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2975 859f1fd930795661b4cc39573392cfaa 361 Pfam PF00072 Response regulator receiver domain 6 117 2.5E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2975 859f1fd930795661b4cc39573392cfaa 361 Gene3D G3DSA:1.10.287.130 127 200 2.7E-12 T 15-10-2018 THII_2975 859f1fd930795661b4cc39573392cfaa 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 353 7.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2975 859f1fd930795661b4cc39573392cfaa 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 7.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2975 859f1fd930795661b4cc39573392cfaa 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 312 7.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2975 859f1fd930795661b4cc39573392cfaa 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 7.2E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2975 859f1fd930795661b4cc39573392cfaa 361 Gene3D G3DSA:3.30.565.10 211 358 8.5E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2975 859f1fd930795661b4cc39573392cfaa 361 SUPERFAMILY SSF55874 219 353 2.88E-34 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2975 859f1fd930795661b4cc39573392cfaa 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 250 354 3.3E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2975 859f1fd930795661b4cc39573392cfaa 361 SMART SM00388 136 204 3.6E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2184 380e47923971edfdbdb79d564ccb6265 212 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 51 212 2.7E-42 T 15-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 THII_2184 380e47923971edfdbdb79d564ccb6265 212 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 11 212 27.783 T 15-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 THII_2184 380e47923971edfdbdb79d564ccb6265 212 SUPERFAMILY SSF47240 51 181 4.41E-16 T 15-10-2018 IPR009078 Ferritin-like superfamily THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Pfam PF08447 PAS fold 378 465 9.4E-23 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Pfam PF08447 PAS fold 31 103 6.4E-9 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SUPERFAMILY SSF55785 716 830 4.19E-16 T 15-10-2018 IPR035965 PAS domain superfamily THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Gene3D G3DSA:3.30.450.20 838 959 6.6E-15 T 15-10-2018 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SUPERFAMILY SSF55785 469 584 4.83E-16 T 15-10-2018 IPR035965 PAS domain superfamily THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Gene3D G3DSA:3.30.450.20 1207 1334 1.5E-14 T 15-10-2018 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Gene3D G3DSA:3.30.450.20 355 422 1.0E-12 T 15-10-2018 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Gene3D G3DSA:2.10.70.100 427 471 1.4E-13 T 15-10-2018 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 482 592 9.9E-14 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 712 834 2.3E-12 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1215 1310 5.6E-14 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1341 1453 1.3E-15 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 596 711 5.1E-7 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 106 6.1E-9 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 959 1077 1.1E-6 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 834 955 6.8E-6 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 360 479 2.6E-18 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1086 1210 4.1E-14 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Gene3D G3DSA:3.30.450.20 472 584 5.6E-16 T 15-10-2018 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Pfam PF00989 PAS fold 1346 1437 1.3E-8 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Pfam PF00989 PAS fold 715 824 6.0E-9 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Pfam PF00989 PAS fold 1091 1184 3.2E-7 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Pfam PF00989 PAS fold 1219 1284 1.1E-5 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Pfam PF08448 PAS fold 967 1071 1.8E-9 T 15-10-2018 IPR013656 PAS fold-4 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SUPERFAMILY SSF55785 583 704 7.33E-13 T 15-10-2018 IPR035965 PAS domain superfamily THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Gene3D G3DSA:3.30.450.20 960 1084 1.9E-20 T 15-10-2018 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SUPERFAMILY SSF55785 945 1064 2.09E-15 T 15-10-2018 IPR035965 PAS domain superfamily THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00091 1090 1159 1.6E-9 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00091 355 423 1.6E-5 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00091 6 72 3.5E-7 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00091 1344 1410 3.4E-8 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00091 711 778 6.9E-9 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00091 483 549 0.0053 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00091 598 665 9.4E-7 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00091 1219 1288 1.3E-6 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00091 835 901 7.8 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00091 961 1028 0.016 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00091 238 305 290.0 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SUPERFAMILY SSF55785 1078 1201 1.64E-19 T 15-10-2018 IPR035965 PAS domain superfamily THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Gene3D G3DSA:3.30.450.20 1335 1454 3.8E-15 T 15-10-2018 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SUPERFAMILY SSF55785 361 475 5.32E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Pfam PF13188 PAS domain 599 649 3.8E-5 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Pfam PF13188 PAS domain 836 869 0.049 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Gene3D G3DSA:3.30.450.20 1085 1204 2.1E-18 T 15-10-2018 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00086 430 472 4.3E-10 T 15-10-2018 IPR001610 PAC motif THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00086 785 827 9.7 T 15-10-2018 IPR001610 PAC motif THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00086 546 586 200.0 T 15-10-2018 IPR001610 PAC motif THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SMART SM00086 78 115 350.0 T 15-10-2018 IPR001610 PAC motif THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SUPERFAMILY SSF55785 15 103 4.94E-12 T 15-10-2018 IPR035965 PAS domain superfamily THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Pfam PF13426 PAS domain 493 585 2.3E-7 T 15-10-2018 IPR000014 PAS domain THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SUPERFAMILY SSF55785 824 947 2.27E-13 T 15-10-2018 IPR035965 PAS domain superfamily THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SUPERFAMILY SSF55785 1329 1451 7.26E-17 T 15-10-2018 IPR035965 PAS domain superfamily THII_2942 df0d9dc83097345caa460569e4c672c1 1458 SUPERFAMILY SSF55785 1209 1309 5.23E-15 T 15-10-2018 IPR035965 PAS domain superfamily THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Gene3D G3DSA:3.30.450.20 12 117 1.6E-13 T 15-10-2018 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Gene3D G3DSA:3.30.450.20 588 703 6.7E-17 T 15-10-2018 THII_2942 df0d9dc83097345caa460569e4c672c1 1458 Gene3D G3DSA:3.30.450.20 718 837 1.8E-16 T 15-10-2018 THII_0883 d044c828437ed08a71838498255a79bf 150 SUPERFAMILY SSF52980 14 130 2.14E-12 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0883 d044c828437ed08a71838498255a79bf 150 Gene3D G3DSA:3.90.1570.10 8 150 1.5E-16 T 15-10-2018 THII_0883 d044c828437ed08a71838498255a79bf 150 Pfam PF05685 Putative restriction endonuclease 14 126 4.2E-10 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3784 4216a5f720f6fa67d7c38a6ba3c2efec 738 Pfam PF10605 3HB-oligomer hydrolase (3HBOH) 48 713 7.9E-208 T 15-10-2018 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22 THII_3784 4216a5f720f6fa67d7c38a6ba3c2efec 738 SUPERFAMILY SSF53474 342 662 4.84E-8 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_3063 35a883860b2a6cd94107e079b1027849 220 SUPERFAMILY SSF46894 124 215 4.25E-27 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 THII_3063 35a883860b2a6cd94107e079b1027849 220 SUPERFAMILY SSF52172 1 118 7.97E-36 T 15-10-2018 IPR011006 CheY-like superfamily THII_3063 35a883860b2a6cd94107e079b1027849 220 Gene3D G3DSA:1.10.10.10 122 220 5.4E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3063 35a883860b2a6cd94107e079b1027849 220 Gene3D G3DSA:3.40.50.2300 1 121 3.1E-41 T 15-10-2018 THII_3063 35a883860b2a6cd94107e079b1027849 220 SMART SM00448 1 112 1.1E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3063 35a883860b2a6cd94107e079b1027849 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 1.2E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_3063 35a883860b2a6cd94107e079b1027849 220 SMART SM00862 145 216 1.8E-24 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_3063 35a883860b2a6cd94107e079b1027849 220 Pfam PF00072 Response regulator receiver domain 4 112 9.2E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0797 78a417ae704263ce258ecaa3042d14af 809 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 151 162 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site THII_0797 78a417ae704263ce258ecaa3042d14af 809 Gene3D G3DSA:3.40.50.200 137 427 5.9E-45 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_0797 78a417ae704263ce258ecaa3042d14af 809 SUPERFAMILY SSF52743 143 708 2.54E-47 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_0797 78a417ae704263ce258ecaa3042d14af 809 Pfam PF00082 Subtilase family 146 332 7.7E-26 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 THII_0797 78a417ae704263ce258ecaa3042d14af 809 Pfam PF00082 Subtilase family 514 700 8.1E-20 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 THII_0797 78a417ae704263ce258ecaa3042d14af 809 PRINTS PR00723 Subtilisin serine protease family (S8) signature 146 165 9.3E-12 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_0797 78a417ae704263ce258ecaa3042d14af 809 PRINTS PR00723 Subtilisin serine protease family (S8) signature 219 232 9.3E-12 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_0797 78a417ae704263ce258ecaa3042d14af 809 Gene3D G3DSA:3.40.50.200 470 710 3.0E-31 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_0797 78a417ae704263ce258ecaa3042d14af 809 SUPERFAMILY SSF81296 710 786 3.31E-8 T 15-10-2018 IPR014756 Immunoglobulin E-set THII_0797 78a417ae704263ce258ecaa3042d14af 809 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 644 654 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site THII_0797 78a417ae704263ce258ecaa3042d14af 809 Gene3D G3DSA:2.60.40.10 711 809 8.0E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3592 2f05190beb363f6d6f30000903fc7c0c 168 Pfam PF01750 Hydrogenase maturation protease 21 146 2.1E-29 T 15-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 THII_3592 2f05190beb363f6d6f30000903fc7c0c 168 Gene3D G3DSA:3.40.50.1450 1 160 4.7E-42 T 15-10-2018 IPR023430 Peptidase HybD-like domain superfamily THII_3592 2f05190beb363f6d6f30000903fc7c0c 168 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 148 6.0E-43 T 15-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 THII_3592 2f05190beb363f6d6f30000903fc7c0c 168 SUPERFAMILY SSF53163 1 157 1.54E-42 T 15-10-2018 IPR023430 Peptidase HybD-like domain superfamily THII_3592 2f05190beb363f6d6f30000903fc7c0c 168 PRINTS PR00446 Hydrogen uptake protein signature 3 15 8.9E-18 T 15-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 THII_3592 2f05190beb363f6d6f30000903fc7c0c 168 PRINTS PR00446 Hydrogen uptake protein signature 15 26 8.9E-18 T 15-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 THII_3592 2f05190beb363f6d6f30000903fc7c0c 168 PRINTS PR00446 Hydrogen uptake protein signature 67 83 8.9E-18 T 15-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 THII_3592 2f05190beb363f6d6f30000903fc7c0c 168 PRINTS PR00446 Hydrogen uptake protein signature 35 52 8.9E-18 T 15-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 THII_3592 2f05190beb363f6d6f30000903fc7c0c 168 PRINTS PR00446 Hydrogen uptake protein signature 56 66 8.9E-18 T 15-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 THII_3535 66f8862d0ca6ecc8ccdb0ac4f1259c0d 296 Pfam PF03547 Membrane transport protein 6 144 2.0E-6 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 THII_3535 66f8862d0ca6ecc8ccdb0ac4f1259c0d 296 Pfam PF03547 Membrane transport protein 146 285 6.0E-12 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 THII_1427 c63ee6fa19744101fa431ab53505e85a 332 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 14 321 6.2E-108 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 THII_1427 c63ee6fa19744101fa431ab53505e85a 332 SUPERFAMILY SSF52540 47 178 5.32E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1427 c63ee6fa19744101fa431ab53505e85a 332 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 20 321 8.4E-83 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 THII_1427 c63ee6fa19744101fa431ab53505e85a 332 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 322 39.169 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 THII_1658 aeec93496b14a76e114098d115700dc7 545 Gene3D G3DSA:3.90.550.10 9 316 1.2E-61 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1658 aeec93496b14a76e114098d115700dc7 545 Pfam PF00535 Glycosyl transferase family 2 75 233 2.5E-27 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_1658 aeec93496b14a76e114098d115700dc7 545 SUPERFAMILY SSF53448 72 284 4.59E-51 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1658 aeec93496b14a76e114098d115700dc7 545 SUPERFAMILY SSF53448 332 514 2.53E-16 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1658 aeec93496b14a76e114098d115700dc7 545 Gene3D G3DSA:3.90.550.10 323 495 1.3E-8 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2670 029d72319c29cb230760c7788f7bac15 346 Pfam PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain 188 279 3.5E-4 T 15-10-2018 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain THII_2670 029d72319c29cb230760c7788f7bac15 346 SUPERFAMILY SSF55205 9 187 2.42E-59 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 THII_2670 029d72319c29cb230760c7788f7bac15 346 Pfam PF01137 RNA 3'-terminal phosphate cyclase 15 331 1.5E-78 T 15-10-2018 IPR023797 RNA 3'-terminal phosphate cyclase domain THII_2670 029d72319c29cb230760c7788f7bac15 346 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 9 330 1.2E-112 T 15-10-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 THII_2670 029d72319c29cb230760c7788f7bac15 346 SUPERFAMILY SSF52913 188 283 2.09E-23 T 15-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily THII_2670 029d72319c29cb230760c7788f7bac15 346 PIRSF PIRSF005378 5 340 1.3E-96 T 15-10-2018 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 THII_2670 029d72319c29cb230760c7788f7bac15 346 Gene3D G3DSA:3.65.10.20 11 329 1.8E-114 T 15-10-2018 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily THII_2670 029d72319c29cb230760c7788f7bac15 346 Hamap MF_00200 RNA 3'-terminal phosphate cyclase [rtcA]. 8 333 35.222 T 15-10-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 THII_2670 029d72319c29cb230760c7788f7bac15 346 Gene3D G3DSA:3.30.360.20 189 281 1.8E-114 T 15-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily THII_2913 17c02c0d421a634c3afe13326db9d898 544 Gene3D G3DSA:3.40.50.300 1 284 8.9E-130 T 15-10-2018 THII_2913 17c02c0d421a634c3afe13326db9d898 544 Pfam PF00117 Glutamine amidotransferase class-I 301 534 1.5E-57 T 15-10-2018 IPR017926 Glutamine amidotransferase THII_2913 17c02c0d421a634c3afe13326db9d898 544 Gene3D G3DSA:3.40.50.880 287 543 7.8E-101 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_2913 17c02c0d421a634c3afe13326db9d898 544 SUPERFAMILY SSF52540 1 267 2.06E-119 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2913 17c02c0d421a634c3afe13326db9d898 544 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 6.4E-243 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 THII_2913 17c02c0d421a634c3afe13326db9d898 544 Hamap MF_01227 CTP synthase [pyrG]. 2 539 50.015 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 THII_2913 17c02c0d421a634c3afe13326db9d898 544 SUPERFAMILY SSF52317 290 541 8.87E-84 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_2913 17c02c0d421a634c3afe13326db9d898 544 Pfam PF06418 CTP synthase N-terminus 3 265 3.8E-123 T 15-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 THII_1199 d8aec00119b15facd03eaf6002b2077d 315 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 11 314 2.6E-112 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 THII_1199 d8aec00119b15facd03eaf6002b2077d 315 Pfam PF01795 MraW methylase family 11 315 3.6E-110 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 THII_1199 d8aec00119b15facd03eaf6002b2077d 315 SUPERFAMILY SSF53335 11 314 1.19E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1199 d8aec00119b15facd03eaf6002b2077d 315 Gene3D G3DSA:1.10.150.170 119 221 2.3E-104 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 THII_1199 d8aec00119b15facd03eaf6002b2077d 315 SUPERFAMILY SSF81799 121 220 9.94E-33 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 THII_1199 d8aec00119b15facd03eaf6002b2077d 315 PIRSF PIRSF004486 7 315 1.5E-104 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 THII_1199 d8aec00119b15facd03eaf6002b2077d 315 Gene3D G3DSA:3.40.50.150 15 314 2.3E-104 T 15-10-2018 THII_1199 d8aec00119b15facd03eaf6002b2077d 315 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 12 315 37.818 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 THII_3309 79c36f2ba124f0249a8cfd37ca9e2c8a 547 SUPERFAMILY SSF54001 74 278 5.4E-22 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily THII_3309 79c36f2ba124f0249a8cfd37ca9e2c8a 547 Gene3D G3DSA:3.10.620.30 29 192 1.6E-15 T 15-10-2018 THII_3309 79c36f2ba124f0249a8cfd37ca9e2c8a 547 Pfam PF01841 Transglutaminase-like superfamily 68 178 1.5E-11 T 15-10-2018 IPR002931 Transglutaminase-like THII_3309 79c36f2ba124f0249a8cfd37ca9e2c8a 547 SMART SM00460 115 181 5.2E-7 T 15-10-2018 IPR002931 Transglutaminase-like THII_2939 e8dc6818547cdf3e56ecc4cf349365a5 97 SUPERFAMILY SSF81333 8 83 2.75E-14 T 15-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily THII_2939 e8dc6818547cdf3e56ecc4cf349365a5 97 Pfam PF00137 ATP synthase subunit C 16 76 1.6E-6 T 15-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 THII_2939 e8dc6818547cdf3e56ecc4cf349365a5 97 Gene3D G3DSA:1.20.20.10 3 82 1.8E-23 T 15-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2939 e8dc6818547cdf3e56ecc4cf349365a5 97 Hamap MF_01396 ATP synthase subunit c [atpH]. 14 79 13.708 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2939 e8dc6818547cdf3e56ecc4cf349365a5 97 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 81 1.6E-19 T 15-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 THII_2939 e8dc6818547cdf3e56ecc4cf349365a5 97 ProSitePatterns PS00605 ATP synthase c subunit signature. 44 65 - T 15-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_1828 eb975d486962e0da0f522a89190fe23e 102 SUPERFAMILY SSF102829 9 96 3.01E-21 T 15-10-2018 IPR036192 Cell division protein ZapA-like superfamily THII_1828 eb975d486962e0da0f522a89190fe23e 102 Pfam PF05164 Cell division protein ZapA 9 93 3.7E-19 T 15-10-2018 IPR007838 Cell division protein ZapA-like THII_1828 eb975d486962e0da0f522a89190fe23e 102 Gene3D G3DSA:1.20.5.50 51 100 1.1E-8 T 15-10-2018 THII_1828 eb975d486962e0da0f522a89190fe23e 102 Gene3D G3DSA:1.10.20.30 3 50 2.4E-19 T 15-10-2018 THII_2864 5ff01ce7ca688eeaebf1f6467af6f00f 108 Pfam PF01909 Nucleotidyltransferase domain 24 93 5.7E-11 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 THII_2864 5ff01ce7ca688eeaebf1f6467af6f00f 108 SUPERFAMILY SSF81301 17 106 9.6E-19 T 15-10-2018 THII_2864 5ff01ce7ca688eeaebf1f6467af6f00f 108 Gene3D G3DSA:3.30.460.10 13 108 2.9E-24 T 15-10-2018 THII_0881 51d51669c74c8e8edc2b84226ca749de 348 Gene3D G3DSA:3.40.50.10740 35 183 2.9E-50 T 15-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal THII_0881 51d51669c74c8e8edc2b84226ca749de 348 PIRSF PIRSF028757 35 346 1.8E-93 T 15-10-2018 IPR003507 Peptidase family S66 THII_0881 51d51669c74c8e8edc2b84226ca749de 348 Gene3D G3DSA:3.50.30.60 184 344 7.5E-52 T 15-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily THII_0881 51d51669c74c8e8edc2b84226ca749de 348 SUPERFAMILY SSF52317 34 189 4.53E-45 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_0881 51d51669c74c8e8edc2b84226ca749de 348 Pfam PF02016 LD-carboxypeptidase 47 332 2.1E-83 T 15-10-2018 IPR003507 Peptidase family S66 THII_0881 51d51669c74c8e8edc2b84226ca749de 348 SUPERFAMILY SSF141986 201 338 9.29E-47 T 15-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily THII_3092 fb013cc9547f7a75fb2da413ec87ab16 687 Pfam PF03190 Protein of unknown function, DUF255 7 169 4.6E-70 T 15-10-2018 IPR004879 Domain of unknown function DUF255 THII_3092 fb013cc9547f7a75fb2da413ec87ab16 687 SUPERFAMILY SSF48208 196 551 1.98E-70 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 THII_3092 fb013cc9547f7a75fb2da413ec87ab16 687 Gene3D G3DSA:3.40.30.10 6 175 7.0E-64 T 15-10-2018 THII_3092 fb013cc9547f7a75fb2da413ec87ab16 687 PIRSF PIRSF006402 1 687 1.0E-216 T 15-10-2018 IPR024705 Spermatogenesis-associated protein 20 THII_3092 fb013cc9547f7a75fb2da413ec87ab16 687 SUPERFAMILY SSF52833 6 153 4.96E-31 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_1339 7758f0804effd8b5f7e348a41d27cf70 86 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 49 5.4E-21 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 THII_1339 7758f0804effd8b5f7e348a41d27cf70 86 Pfam PF02416 mttA/Hcf106 family 5 54 4.4E-14 T 15-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 THII_1339 7758f0804effd8b5f7e348a41d27cf70 86 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 63 20.8 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 THII_1383 bcd42be1880aec2f3ca4a5f7c4835015 112 Gene3D G3DSA:2.60.120.10 16 109 3.8E-37 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_1383 bcd42be1880aec2f3ca4a5f7c4835015 112 Pfam PF07883 Cupin domain 47 103 4.5E-8 T 15-10-2018 IPR013096 Cupin 2, conserved barrel THII_1383 bcd42be1880aec2f3ca4a5f7c4835015 112 SUPERFAMILY SSF51182 16 106 4.32E-16 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 SUPERFAMILY SSF57938 135 212 9.94E-23 T 15-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 SUPERFAMILY SSF49493 115 268 6.15E-23 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 7.9E-141 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 41.862 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 Gene3D G3DSA:1.10.287.110 1 112 4.9E-40 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 Pfam PF00684 DnaJ central domain 148 208 7.9E-15 T 15-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 PRINTS PR00625 DnaJ domain signature 62 81 3.7E-33 T 15-10-2018 IPR001623 DnaJ domain THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 PRINTS PR00625 DnaJ domain signature 25 40 3.7E-33 T 15-10-2018 IPR001623 DnaJ domain THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 PRINTS PR00625 DnaJ domain signature 42 62 3.7E-33 T 15-10-2018 IPR001623 DnaJ domain THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 PRINTS PR00625 DnaJ domain signature 7 25 3.7E-33 T 15-10-2018 IPR001623 DnaJ domain THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 Pfam PF01556 DnaJ C terminal domain 122 334 4.6E-43 T 15-10-2018 IPR002939 Chaperone DnaJ, C-terminal THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 15-10-2018 IPR018253 DnaJ domain, conserved site THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 SMART SM00271 4 62 7.9E-33 T 15-10-2018 IPR001623 DnaJ domain THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 SUPERFAMILY SSF46565 1 108 3.01E-36 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 SUPERFAMILY SSF49493 260 345 7.98E-21 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 Gene3D G3DSA:2.60.260.20 256 365 3.3E-28 T 15-10-2018 THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 Gene3D G3DSA:2.10.230.10 148 212 5.1E-21 T 15-10-2018 THII_2709 d986282c02c7c13a4d0595de4d968ed9 379 Pfam PF00226 DnaJ domain 5 67 5.1E-29 T 15-10-2018 IPR001623 DnaJ domain THII_0324 30d235bf8d0ef5982f4f5b03d157cbcc 153 Pfam PF01322 Cytochrome C' 31 151 4.2E-38 T 15-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 THII_0324 30d235bf8d0ef5982f4f5b03d157cbcc 153 Gene3D G3DSA:1.20.120.10 26 153 1.3E-41 T 15-10-2018 THII_0324 30d235bf8d0ef5982f4f5b03d157cbcc 153 PIRSF PIRSF000027 10 153 1.0E-44 T 15-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 THII_0324 30d235bf8d0ef5982f4f5b03d157cbcc 153 SUPERFAMILY SSF47175 31 153 1.91E-40 T 15-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 THII_1439 3f20f142441b28014603ee590e1e772d 113 SMART SM00834 1 42 3.3E-19 T 15-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain THII_1439 3f20f142441b28014603ee590e1e772d 113 Pfam PF09723 Zinc ribbon domain 1 41 4.6E-17 T 15-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain THII_1439 3f20f142441b28014603ee590e1e772d 113 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 3.7E-22 T 15-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain THII_0587 d831e742751e3f2850ed5ff7e2e28385 274 TIGRFAM TIGR03122 one_C_dehyd_C: formylmethanofuran dehydrogenase subunit C 4 267 3.7E-76 T 15-10-2018 IPR017550 Formylmethanofuran dehydrogenase subunit C GO:0015948|GO:0018493|GO:0046914|GO:0055114 KEGG: 00680+1.2.7.12|MetaCyc: PWY-5209|MetaCyc: PWY-7784 THII_0587 d831e742751e3f2850ed5ff7e2e28385 274 SUPERFAMILY SSF69336 14 223 1.31E-41 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 THII_0587 d831e742751e3f2850ed5ff7e2e28385 274 Gene3D G3DSA:2.160.20.60 83 221 1.7E-18 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 THII_0587 d831e742751e3f2850ed5ff7e2e28385 274 Pfam PF01493 GXGXG motif 83 205 8.4E-15 T 15-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.9E-47 T 15-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 451 6.6E-125 T 15-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 Gene3D G3DSA:1.20.200.10 118 446 8.8E-154 T 15-10-2018 THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 3.8E-19 T 15-10-2018 IPR000362 Fumarate lyase family THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 3.8E-19 T 15-10-2018 IPR000362 Fumarate lyase family THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 3.8E-19 T 15-10-2018 IPR000362 Fumarate lyase family THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 3.8E-19 T 15-10-2018 IPR000362 Fumarate lyase family THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 Pfam PF00206 Lyase 14 312 8.5E-64 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 Gene3D G3DSA:1.10.275.10 1 117 2.3E-46 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 Gene3D G3DSA:1.10.40.30 382 445 8.8E-154 T 15-10-2018 THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 THII_3541 23eaeb2dccb303f7b2571116068c69cb 459 SUPERFAMILY SSF48557 10 451 8.48E-104 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 THII_0277 82f33fd2d079c1e42aaea88b6b5a1b28 567 Pfam PF01400 Astacin (Peptidase family M12A) 260 350 4.1E-5 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 THII_0277 82f33fd2d079c1e42aaea88b6b5a1b28 567 Gene3D G3DSA:3.40.390.10 217 451 1.0E-23 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 THII_0277 82f33fd2d079c1e42aaea88b6b5a1b28 567 SUPERFAMILY SSF55486 219 451 5.18E-23 T 15-10-2018 THII_0277 82f33fd2d079c1e42aaea88b6b5a1b28 567 SMART SM00235 218 380 0.0051 T 15-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 THII_1130 de0cd9a9aff0c1c2d24fc677d3922c8b 394 Gene3D G3DSA:3.40.50.2300 2 136 4.2E-38 T 15-10-2018 THII_1130 de0cd9a9aff0c1c2d24fc677d3922c8b 394 SUPERFAMILY SSF47384 154 234 1.1E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1130 de0cd9a9aff0c1c2d24fc677d3922c8b 394 SMART SM00448 5 118 2.3E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1130 de0cd9a9aff0c1c2d24fc677d3922c8b 394 Gene3D G3DSA:3.30.565.10 242 394 4.4E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1130 de0cd9a9aff0c1c2d24fc677d3922c8b 394 SUPERFAMILY SSF55874 226 386 5.02E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1130 de0cd9a9aff0c1c2d24fc677d3922c8b 394 SMART SM00388 169 235 1.0E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1130 de0cd9a9aff0c1c2d24fc677d3922c8b 394 Pfam PF00512 His Kinase A (phospho-acceptor) domain 169 233 3.2E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1130 de0cd9a9aff0c1c2d24fc677d3922c8b 394 Pfam PF00072 Response regulator receiver domain 7 118 4.1E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1130 de0cd9a9aff0c1c2d24fc677d3922c8b 394 SUPERFAMILY SSF52172 6 160 5.69E-43 T 15-10-2018 IPR011006 CheY-like superfamily THII_1130 de0cd9a9aff0c1c2d24fc677d3922c8b 394 Gene3D G3DSA:1.10.287.130 137 233 2.5E-18 T 15-10-2018 THII_1130 de0cd9a9aff0c1c2d24fc677d3922c8b 394 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 389 4.9E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1208 e64c9794155ebeb77d4050191bcffef3 310 Gene3D G3DSA:1.20.1640.10 101 296 2.8E-13 T 15-10-2018 THII_1208 e64c9794155ebeb77d4050191bcffef3 310 Pfam PF07549 SecD/SecF GG Motif 32 59 2.0E-10 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site THII_1208 e64c9794155ebeb77d4050191bcffef3 310 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 29.373 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 THII_1208 e64c9794155ebeb77d4050191bcffef3 310 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 4.1E-31 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial THII_1208 e64c9794155ebeb77d4050191bcffef3 310 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 4.1E-31 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial THII_1208 e64c9794155ebeb77d4050191bcffef3 310 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 4.1E-31 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial THII_1208 e64c9794155ebeb77d4050191bcffef3 310 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 4.1E-31 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial THII_1208 e64c9794155ebeb77d4050191bcffef3 310 Pfam PF02355 Protein export membrane protein 110 291 1.7E-68 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial THII_1208 e64c9794155ebeb77d4050191bcffef3 310 SUPERFAMILY SSF82866 113 290 2.75E-40 T 15-10-2018 THII_1208 e64c9794155ebeb77d4050191bcffef3 310 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 4.0E-85 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 THII_1208 e64c9794155ebeb77d4050191bcffef3 310 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 280 6.4E-57 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 Gene3D G3DSA:1.10.8.60 303 381 9.2E-21 T 15-10-2018 THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 Gene3D G3DSA:3.40.50.300 137 302 3.4E-40 T 15-10-2018 THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 SUPERFAMILY SSF46689 345 443 1.21E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 SUPERFAMILY SSF52172 4 184 3.7E-45 T 15-10-2018 IPR011006 CheY-like superfamily THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 SMART SM00382 159 294 0.0024 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 Gene3D G3DSA:1.10.10.60 391 447 8.5E-16 T 15-10-2018 THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 345 354 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 Pfam PF02954 Bacterial regulatory protein, Fis family 400 439 1.7E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 406 423 5.0E-5 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 423 443 5.0E-5 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 Pfam PF00072 Response regulator receiver domain 5 114 1.0E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 Pfam PF00158 Sigma-54 interaction domain 141 298 1.5E-36 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 SUPERFAMILY SSF52540 140 375 9.52E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 Gene3D G3DSA:3.40.50.2300 1 136 9.8E-38 T 15-10-2018 THII_2581 16cf51405842a1a59484c2d3d5ce3b93 452 SMART SM00448 3 115 3.9E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1601 60d1364d32750310d65f0522cb7fded0 247 Pfam PF13719 zinc-ribbon domain 1 37 2.0E-11 T 15-10-2018 IPR011723 Zinc finger/thioredoxin putative THII_1601 60d1364d32750310d65f0522cb7fded0 247 Pfam PF11906 Protein of unknown function (DUF3426) 95 244 4.6E-29 T 15-10-2018 IPR021834 Protein of unknown function DUF3426 THII_1601 60d1364d32750310d65f0522cb7fded0 247 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 37 4.8E-15 T 15-10-2018 IPR011723 Zinc finger/thioredoxin putative THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SUPERFAMILY SSF52172 993 1111 1.71E-10 T 15-10-2018 IPR011006 CheY-like superfamily THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SUPERFAMILY SSF52172 1135 1256 5.69E-40 T 15-10-2018 IPR011006 CheY-like superfamily THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Gene3D G3DSA:3.40.50.2300 989 1121 6.6E-11 T 15-10-2018 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Gene3D G3DSA:3.30.565.10 640 815 2.7E-51 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 688 811 1.3E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Gene3D G3DSA:3.40.50.2300 870 983 2.5E-22 T 15-10-2018 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 177 3.9E-11 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SUPERFAMILY SSF55781 295 467 8.63E-23 T 15-10-2018 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Gene3D G3DSA:3.40.50.12740 1135 1257 1.9E-43 T 15-10-2018 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SMART SM00388 573 641 9.8E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Pfam PF13185 GAF domain 334 467 1.0E-9 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SMART SM00387 688 812 5.1E-38 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SUPERFAMILY SSF55874 630 810 7.86E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SUPERFAMILY SSF52172 870 982 1.85E-22 T 15-10-2018 IPR011006 CheY-like superfamily THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Gene3D G3DSA:1.20.1480.50 175 271 2.9E-9 T 15-10-2018 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Pfam PF00072 Response regulator receiver domain 872 978 9.5E-15 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Pfam PF00072 Response regulator receiver domain 995 1105 7.4E-10 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Pfam PF00072 Response regulator receiver domain 1139 1251 1.9E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Gene3D G3DSA:3.30.450.40 302 472 1.8E-15 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Gene3D G3DSA:1.10.287.130 538 639 8.0E-25 T 15-10-2018 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SUPERFAMILY SSF47384 559 642 4.51E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 Pfam PF00512 His Kinase A (phospho-acceptor) domain 574 641 4.5E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 PRINTS PR00344 Bacterial sensor protein C-terminal signature 772 790 4.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 PRINTS PR00344 Bacterial sensor protein C-terminal signature 737 751 4.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 PRINTS PR00344 Bacterial sensor protein C-terminal signature 755 765 4.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 PRINTS PR00344 Bacterial sensor protein C-terminal signature 796 809 4.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SMART SM00065 330 477 0.0024 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SMART SM00448 992 1105 0.13 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SMART SM00448 1137 1251 6.5E-42 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1949 6fd28bfb2c7e5e050a53910da73c04ee 1257 SMART SM00448 869 979 1.2E-16 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3072 69784f0645d9505438d97432963a8d85 1098 Gene3D G3DSA:1.10.10.160 78 183 1.1E-93 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily THII_3072 69784f0645d9505438d97432963a8d85 1098 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1098 20.305 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 THII_3072 69784f0645d9505438d97432963a8d85 1098 Gene3D G3DSA:3.40.50.10930 5 293 1.1E-93 T 15-10-2018 THII_3072 69784f0645d9505438d97432963a8d85 1098 SUPERFAMILY SSF52540 1 323 1.22E-98 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3072 69784f0645d9505438d97432963a8d85 1098 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 773 6.6E-280 T 15-10-2018 THII_3072 69784f0645d9505438d97432963a8d85 1098 Gene3D G3DSA:1.10.486.10 423 640 2.3E-174 T 15-10-2018 THII_3072 69784f0645d9505438d97432963a8d85 1098 PIRSF PIRSF000980 1 1097 0.0 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 THII_3072 69784f0645d9505438d97432963a8d85 1098 Gene3D G3DSA:1.10.10.990 840 910 4.3E-14 T 15-10-2018 THII_3072 69784f0645d9505438d97432963a8d85 1098 SUPERFAMILY SSF52980 796 1094 9.65E-74 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3072 69784f0645d9505438d97432963a8d85 1098 Gene3D G3DSA:3.40.50.300 311 775 2.3E-174 T 15-10-2018 THII_3072 69784f0645d9505438d97432963a8d85 1098 SUPERFAMILY SSF52540 332 774 9.56E-87 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3072 69784f0645d9505438d97432963a8d85 1098 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1059 0.0 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 THII_2782 9240874429928dc8ff0ec33ed06301c2 397 SUPERFAMILY SSF51735 31 322 7.93E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2782 9240874429928dc8ff0ec33ed06301c2 397 Gene3D G3DSA:3.40.50.720 3 395 9.7E-105 T 15-10-2018 THII_2782 9240874429928dc8ff0ec33ed06301c2 397 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 31 391 1.2E-99 T 15-10-2018 IPR010080 Thioester reductase-like domain THII_2782 9240874429928dc8ff0ec33ed06301c2 397 Pfam PF07993 Male sterility protein 33 272 5.0E-66 T 15-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 THII_1495 f40b75bceb7b8d862144856f640cef88 737 Pfam PF02824 TGS domain 411 470 4.2E-20 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 THII_1495 f40b75bceb7b8d862144856f640cef88 737 SUPERFAMILY SSF81271 403 470 1.46E-20 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 THII_1495 f40b75bceb7b8d862144856f640cef88 737 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 43 734 3.1E-215 T 15-10-2018 IPR004811 RelA/SpoT family GO:0015969 THII_1495 f40b75bceb7b8d862144856f640cef88 737 Pfam PF04607 Region found in RelA / SpoT proteins 257 367 5.9E-39 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 THII_1495 f40b75bceb7b8d862144856f640cef88 737 Gene3D G3DSA:3.30.460.10 215 347 3.8E-50 T 15-10-2018 THII_1495 f40b75bceb7b8d862144856f640cef88 737 SMART SM00471 56 175 2.3E-9 T 15-10-2018 IPR003607 HD/PDEase domain THII_1495 f40b75bceb7b8d862144856f640cef88 737 Pfam PF13328 HD domain 41 198 4.4E-50 T 15-10-2018 IPR003607 HD/PDEase domain THII_1495 f40b75bceb7b8d862144856f640cef88 737 SMART SM00954 257 367 8.4E-66 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 THII_1495 f40b75bceb7b8d862144856f640cef88 737 Pfam PF13291 ACT domain 659 735 2.5E-19 T 15-10-2018 IPR002912 ACT domain THII_1495 f40b75bceb7b8d862144856f640cef88 737 Gene3D G3DSA:1.10.3210.10 13 213 1.1E-65 T 15-10-2018 THII_1495 f40b75bceb7b8d862144856f640cef88 737 Gene3D G3DSA:3.30.70.260 659 737 3.1E-16 T 15-10-2018 THII_1495 f40b75bceb7b8d862144856f640cef88 737 SUPERFAMILY SSF81301 202 415 1.03E-62 T 15-10-2018 THII_1495 f40b75bceb7b8d862144856f640cef88 737 SUPERFAMILY SSF55021 656 735 9.99E-13 T 15-10-2018 THII_1495 f40b75bceb7b8d862144856f640cef88 737 SUPERFAMILY SSF109604 19 213 1.04E-59 T 15-10-2018 THII_1495 f40b75bceb7b8d862144856f640cef88 737 Gene3D G3DSA:3.10.20.30 404 479 1.7E-30 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_0105 c395ff034278b06a57bbf568ca68860a 74 Pfam PF10276 Zinc-finger domain 37 61 1.6E-7 T 15-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0105 c395ff034278b06a57bbf568ca68860a 74 Gene3D G3DSA:2.60.260.40 11 63 5.3E-9 T 15-10-2018 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 SMART SM00065 1352 1527 3.9E-6 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 124 136 - T 15-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 SUPERFAMILY SSF47384 1523 1608 9.22E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 SMART SM00220 14 268 6.9E-31 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 SUPERFAMILY SSF56112 7 263 2.32E-56 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1652 1771 2.7E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 SMART SM00388 1539 1607 4.7E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 SUPERFAMILY SSF52540 297 581 3.82E-18 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 Gene3D G3DSA:3.30.450.40 1325 1527 1.3E-27 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 SUPERFAMILY SSF55781 1339 1537 3.27E-21 T 15-10-2018 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 Gene3D G3DSA:1.10.287.130 1528 1609 2.2E-23 T 15-10-2018 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 Pfam PF00069 Protein kinase domain 20 258 3.7E-40 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1539 1606 1.3E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1697 1711 2.2E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1756 1769 2.2E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1715 1725 2.2E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1732 1750 2.2E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 Gene3D G3DSA:1.10.510.10 6 268 4.1E-47 T 15-10-2018 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 Pfam PF01590 GAF domain 1354 1517 4.1E-10 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 SMART SM00387 1651 1772 6.2E-38 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 Gene3D G3DSA:3.40.50.300 292 514 1.0E-9 T 15-10-2018 THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 Gene3D G3DSA:3.30.565.10 1610 1774 2.6E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 SUPERFAMILY SSF55874 1597 1770 2.62E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1514 0cfb078d6c0901e64c9d3bf73a2425f3 1775 Pfam PF13191 AAA ATPase domain 300 489 1.2E-35 T 15-10-2018 THII_3708 8658f9d5c5820e0732d7fc773b146edf 409 SUPERFAMILY SSF102114 25 406 1.83E-98 T 15-10-2018 THII_3708 8658f9d5c5820e0732d7fc773b146edf 409 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 27 381 2.8E-115 T 15-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 THII_3708 8658f9d5c5820e0732d7fc773b146edf 409 Pfam PF04055 Radical SAM superfamily 31 196 1.3E-16 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_3708 8658f9d5c5820e0732d7fc773b146edf 409 SMART SM00729 26 242 1.5E-42 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_3708 8658f9d5c5820e0732d7fc773b146edf 409 Gene3D G3DSA:3.80.30.20 17 323 8.9E-93 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe THII_3049 ecc061c56e3ab2c85f5c95cc2fd2c28b 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 215 339 4.5E-14 T 15-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_3049 ecc061c56e3ab2c85f5c95cc2fd2c28b 344 SUPERFAMILY SSF52540 3 210 2.42E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3049 ecc061c56e3ab2c85f5c95cc2fd2c28b 344 Gene3D G3DSA:1.10.8.60 145 212 4.8E-22 T 15-10-2018 THII_3049 ecc061c56e3ab2c85f5c95cc2fd2c28b 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 335 1.2E-88 T 15-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 THII_3049 ecc061c56e3ab2c85f5c95cc2fd2c28b 344 Gene3D G3DSA:3.40.50.300 1 139 6.8E-49 T 15-10-2018 THII_3049 ecc061c56e3ab2c85f5c95cc2fd2c28b 344 Pfam PF06144 DNA polymerase III, delta subunit 21 190 2.0E-29 T 15-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 THII_3049 ecc061c56e3ab2c85f5c95cc2fd2c28b 344 SUPERFAMILY SSF48019 212 339 6.46E-25 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 THII_3049 ecc061c56e3ab2c85f5c95cc2fd2c28b 344 Gene3D G3DSA:1.20.272.10 215 342 5.6E-35 T 15-10-2018 THII_3818 39202c3685dd98feb8e3ab39115ca18e 193 SUPERFAMILY SSF52540 4 90 2.62E-7 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2462 c025856ddab7884b17fe34c97fdf651a 313 SUPERFAMILY SSF56770 47 309 5.63E-82 T 15-10-2018 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 207 1.1E-31 T 15-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 Gene3D G3DSA:3.40.50.700 40 226 3.3E-63 T 15-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily THII_2462 c025856ddab7884b17fe34c97fdf651a 313 Gene3D G3DSA:4.10.480.10 229 313 1.6E-35 T 15-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily THII_2462 c025856ddab7884b17fe34c97fdf651a 313 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 17 45 2.2E-6 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_2462 c025856ddab7884b17fe34c97fdf651a 313 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 227 308 3.1E-30 T 15-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal THII_2462 c025856ddab7884b17fe34c97fdf651a 313 PIRSF PIRSF000310 6 313 3.9E-124 T 15-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 16 35 4.0E-6 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_2462 c025856ddab7884b17fe34c97fdf651a 313 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 6 307 1.3E-116 T 15-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 158 182 7.1E-72 T 15-10-2018 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 188 211 7.1E-72 T 15-10-2018 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 7.1E-72 T 15-10-2018 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 232 250 7.1E-72 T 15-10-2018 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 7.1E-72 T 15-10-2018 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 284 297 7.1E-72 T 15-10-2018 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 7.1E-72 T 15-10-2018 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 214 231 7.1E-72 T 15-10-2018 THII_2462 c025856ddab7884b17fe34c97fdf651a 313 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 256 282 7.1E-72 T 15-10-2018 THII_3405 1a8caa8b2392a40eeac0404e287f4107 645 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 111 210 2.1E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3405 1a8caa8b2392a40eeac0404e287f4107 645 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 253 392 4.0E-5 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 THII_3405 1a8caa8b2392a40eeac0404e287f4107 645 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 467 623 6.1E-8 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 THII_3405 1a8caa8b2392a40eeac0404e287f4107 645 SUPERFAMILY SSF54211 429 513 9.99E-8 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_3405 1a8caa8b2392a40eeac0404e287f4107 645 Pfam PF13419 Haloacid dehalogenase-like hydrolase 23 210 3.9E-22 T 15-10-2018 THII_3405 1a8caa8b2392a40eeac0404e287f4107 645 Gene3D G3DSA:3.30.230.40 302 404 5.1E-13 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 THII_3405 1a8caa8b2392a40eeac0404e287f4107 645 Gene3D G3DSA:3.30.230.40 531 645 7.3E-15 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 THII_3405 1a8caa8b2392a40eeac0404e287f4107 645 Gene3D G3DSA:3.40.50.1000 22 216 1.1E-36 T 15-10-2018 IPR023214 HAD superfamily THII_3405 1a8caa8b2392a40eeac0404e287f4107 645 Gene3D G3DSA:3.30.230.40 418 517 1.2E-14 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 THII_3405 1a8caa8b2392a40eeac0404e287f4107 645 Gene3D G3DSA:1.10.150.240 35 106 1.1E-36 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THII_3405 1a8caa8b2392a40eeac0404e287f4107 645 SUPERFAMILY SSF56784 20 233 2.85E-41 T 15-10-2018 IPR036412 HAD-like superfamily THII_3630 03ca785e362b283038ca44f046884a56 427 SMART SM01193 4 134 7.5E-95 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 SUPERFAMILY SSF51604 139 426 1.21E-126 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily THII_3630 03ca785e362b283038ca44f046884a56 427 PRINTS PR00148 Enolase signature 161 174 7.1E-46 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 PRINTS PR00148 Enolase signature 363 380 7.1E-46 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 PRINTS PR00148 Enolase signature 311 322 7.1E-46 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 PRINTS PR00148 Enolase signature 37 51 7.1E-46 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 PRINTS PR00148 Enolase signature 107 123 7.1E-46 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 PRINTS PR00148 Enolase signature 334 348 7.1E-46 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 Gene3D G3DSA:3.20.20.120 128 427 2.4E-133 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily THII_3630 03ca785e362b283038ca44f046884a56 427 SMART SM01192 139 425 3.7E-220 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 424 8.8E-132 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 Gene3D G3DSA:3.30.390.10 1 126 2.5E-57 T 15-10-2018 IPR029017 Enolase-like, N-terminal THII_3630 03ca785e362b283038ca44f046884a56 427 Pfam PF03952 Enolase, N-terminal domain 4 134 1.3E-60 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 PIRSF PIRSF001400 1 425 1.7E-189 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 Hamap MF_00318 Enolase [eno]. 2 411 44.541 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 3.0E-210 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 THII_3630 03ca785e362b283038ca44f046884a56 427 SUPERFAMILY SSF54826 4 136 2.95E-56 T 15-10-2018 THII_3630 03ca785e362b283038ca44f046884a56 427 ProSitePatterns PS00164 Enolase signature. 334 347 - T 15-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0486 b8111c8b8085804c9500651f1898ba42 405 Pfam PF12704 MacB-like periplasmic core domain 18 270 8.2E-11 T 15-10-2018 IPR025857 MacB-like periplasmic core domain THII_0486 b8111c8b8085804c9500651f1898ba42 405 Pfam PF02687 FtsX-like permease family 309 396 2.4E-10 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 Pfam PF13541 Subunit ChlI of Mg-chelatase 2 118 3.5E-46 T 15-10-2018 THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 2 473 2.4E-196 T 15-10-2018 IPR004482 Mg chelatase-related protein THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 SMART SM00382 189 371 1.5E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 Pfam PF01078 Magnesium chelatase, subunit ChlI 169 374 5.5E-100 T 15-10-2018 IPR000523 Magnesium chelatase ChlI domain THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 SUPERFAMILY SSF54211 4 145 4.55E-33 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 382 473 3.5E-30 T 15-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 268 283 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 268 282 3.0E-6 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 188 203 3.0E-6 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 296 309 3.0E-6 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 Gene3D G3DSA:3.40.50.300 164 476 6.9E-63 T 15-10-2018 THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 SUPERFAMILY SSF52540 169 477 7.85E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1158 b408bae9c99fbc4e79fb78ba6f5fbcb6 482 Gene3D G3DSA:3.30.230.10 10 146 2.1E-12 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_0637 b73acd81f9dec2def660268ef3b6a0bb 381 Pfam PF00534 Glycosyl transferases group 1 163 318 2.5E-19 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_0637 b73acd81f9dec2def660268ef3b6a0bb 381 SUPERFAMILY SSF53756 17 376 1.67E-35 T 15-10-2018 THII_0637 b73acd81f9dec2def660268ef3b6a0bb 381 Gene3D G3DSA:3.40.50.2000 144 360 2.6E-33 T 15-10-2018 THII_1599 810daa1543d732d482b2e79520100a4a 308 Gene3D G3DSA:3.30.200.20 1 102 7.6E-38 T 15-10-2018 THII_1599 810daa1543d732d482b2e79520100a4a 308 SUPERFAMILY SSF56112 9 305 6.25E-71 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_1599 810daa1543d732d482b2e79520100a4a 308 Hamap MF_00301 Homoserine kinase [thrB]. 1 308 128.67 T 15-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 THII_1599 810daa1543d732d482b2e79520100a4a 308 Pfam PF01636 Phosphotransferase enzyme family 29 242 2.1E-27 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase THII_1599 810daa1543d732d482b2e79520100a4a 308 Gene3D G3DSA:3.90.1200.10 106 308 1.0E-73 T 15-10-2018 THII_1599 810daa1543d732d482b2e79520100a4a 308 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 303 3.9E-107 T 15-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 THII_1770 f02e468c2a80011dda6794c5cd4d4799 254 Gene3D G3DSA:1.10.10.10 155 232 7.0E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1770 f02e468c2a80011dda6794c5cd4d4799 254 SUPERFAMILY SSF51206 13 152 5.24E-29 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like THII_1770 f02e468c2a80011dda6794c5cd4d4799 254 Pfam PF00027 Cyclic nucleotide-binding domain 42 127 2.6E-13 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_1770 f02e468c2a80011dda6794c5cd4d4799 254 Gene3D G3DSA:2.60.120.10 8 154 1.6E-36 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_1770 f02e468c2a80011dda6794c5cd4d4799 254 SUPERFAMILY SSF46785 158 229 1.64E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_1770 f02e468c2a80011dda6794c5cd4d4799 254 SMART SM00100 21 140 2.5E-12 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_1770 f02e468c2a80011dda6794c5cd4d4799 254 SMART SM00419 176 224 3.1E-8 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 THII_1770 f02e468c2a80011dda6794c5cd4d4799 254 Pfam PF13545 Crp-like helix-turn-helix domain 161 230 3.9E-14 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 THII_1222 3dbf3d4f15dd8107a4236ebf74dfea9f 150 Pfam PF00137 ATP synthase subunit C 86 145 8.5E-13 T 15-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 THII_1222 3dbf3d4f15dd8107a4236ebf74dfea9f 150 SUPERFAMILY SSF81333 79 147 9.68E-13 T 15-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily THII_1222 3dbf3d4f15dd8107a4236ebf74dfea9f 150 Gene3D G3DSA:1.20.120.610 31 148 5.1E-15 T 15-10-2018 THII_0856 234792aeecb7e560869f9aa3a672e5fd 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 2.2E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0856 234792aeecb7e560869f9aa3a672e5fd 143 SUPERFAMILY SSF54523 39 138 4.66E-32 T 15-10-2018 THII_0856 234792aeecb7e560869f9aa3a672e5fd 143 Gene3D G3DSA:3.30.700.10 34 138 1.6E-31 T 15-10-2018 THII_0856 234792aeecb7e560869f9aa3a672e5fd 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0856 234792aeecb7e560869f9aa3a672e5fd 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 8.6E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0856 234792aeecb7e560869f9aa3a672e5fd 143 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 139 4.9E-44 T 15-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 THII_0856 234792aeecb7e560869f9aa3a672e5fd 143 Pfam PF08334 Type II secretion system (T2SS), protein G 35 138 1.2E-35 T 15-10-2018 IPR013545 Type II secretion system protein G THII_0856 234792aeecb7e560869f9aa3a672e5fd 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 3.7E-16 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 THII_0856 234792aeecb7e560869f9aa3a672e5fd 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 3.7E-16 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 THII_0562 89db7ad2c378d9fa2c20ea09320241df 154 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 144 2.8E-47 T 15-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 THII_0562 89db7ad2c378d9fa2c20ea09320241df 154 PIRSF PIRSF000847 1 154 3.3E-38 T 15-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 THII_0562 89db7ad2c378d9fa2c20ea09320241df 154 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 15 37 - T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 THII_0562 89db7ad2c378d9fa2c20ea09320241df 154 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 37 3.1E-12 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 THII_0562 89db7ad2c378d9fa2c20ea09320241df 154 Gene3D G3DSA:1.20.120.1760 1 149 1.1E-12 T 15-10-2018 THII_1020 db54b434deec4cb4126024a1076f2760 1208 SMART SM00387 857 967 3.7E-36 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1020 db54b434deec4cb4126024a1076f2760 1208 PRINTS PR00344 Bacterial sensor protein C-terminal signature 927 945 2.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1020 db54b434deec4cb4126024a1076f2760 1208 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 964 2.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1020 db54b434deec4cb4126024a1076f2760 1208 PRINTS PR00344 Bacterial sensor protein C-terminal signature 893 907 2.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1020 db54b434deec4cb4126024a1076f2760 1208 PRINTS PR00344 Bacterial sensor protein C-terminal signature 911 921 2.8E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1020 db54b434deec4cb4126024a1076f2760 1208 Pfam PF00512 His Kinase A (phospho-acceptor) domain 745 810 4.1E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1020 db54b434deec4cb4126024a1076f2760 1208 Gene3D G3DSA:3.30.450.20 608 731 1.3E-19 T 15-10-2018 THII_1020 db54b434deec4cb4126024a1076f2760 1208 Gene3D G3DSA:3.30.450.20 470 595 3.4E-22 T 15-10-2018 THII_1020 db54b434deec4cb4126024a1076f2760 1208 Pfam PF08448 PAS fold 341 452 1.1E-12 T 15-10-2018 IPR013656 PAS fold-4 THII_1020 db54b434deec4cb4126024a1076f2760 1208 SUPERFAMILY SSF55785 614 724 1.4E-18 T 15-10-2018 IPR035965 PAS domain superfamily THII_1020 db54b434deec4cb4126024a1076f2760 1208 Pfam PF13426 PAS domain 616 716 6.3E-7 T 15-10-2018 IPR000014 PAS domain THII_1020 db54b434deec4cb4126024a1076f2760 1208 Pfam PF13426 PAS domain 476 580 5.3E-10 T 15-10-2018 IPR000014 PAS domain THII_1020 db54b434deec4cb4126024a1076f2760 1208 SUPERFAMILY SSF52172 990 1115 1.57E-37 T 15-10-2018 IPR011006 CheY-like superfamily THII_1020 db54b434deec4cb4126024a1076f2760 1208 SMART SM01079 50 237 6.9E-11 T 15-10-2018 IPR006189 CHASE domain THII_1020 db54b434deec4cb4126024a1076f2760 1208 SUPERFAMILY SSF55785 319 449 3.32E-16 T 15-10-2018 IPR035965 PAS domain superfamily THII_1020 db54b434deec4cb4126024a1076f2760 1208 Pfam PF00072 Response regulator receiver domain 992 1103 4.4E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1020 db54b434deec4cb4126024a1076f2760 1208 Gene3D G3DSA:3.30.565.10 811 968 4.3E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1020 db54b434deec4cb4126024a1076f2760 1208 Pfam PF03924 CHASE domain 59 230 7.6E-28 T 15-10-2018 IPR006189 CHASE domain THII_1020 db54b434deec4cb4126024a1076f2760 1208 SMART SM00091 334 402 0.26 T 15-10-2018 IPR000014 PAS domain THII_1020 db54b434deec4cb4126024a1076f2760 1208 SMART SM00091 466 533 9.8E-5 T 15-10-2018 IPR000014 PAS domain THII_1020 db54b434deec4cb4126024a1076f2760 1208 SMART SM00091 603 670 6.4E-4 T 15-10-2018 IPR000014 PAS domain THII_1020 db54b434deec4cb4126024a1076f2760 1208 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 857 966 1.4E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1020 db54b434deec4cb4126024a1076f2760 1208 SUPERFAMILY SSF47384 733 811 7.46E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1020 db54b434deec4cb4126024a1076f2760 1208 SUPERFAMILY SSF55785 448 579 4.83E-19 T 15-10-2018 IPR035965 PAS domain superfamily THII_1020 db54b434deec4cb4126024a1076f2760 1208 Gene3D G3DSA:3.40.50.12740 989 1206 8.6E-41 T 15-10-2018 THII_1020 db54b434deec4cb4126024a1076f2760 1208 SUPERFAMILY SSF55874 799 964 2.1E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1020 db54b434deec4cb4126024a1076f2760 1208 SMART SM00086 408 451 42.0 T 15-10-2018 IPR001610 PAC motif THII_1020 db54b434deec4cb4126024a1076f2760 1208 SMART SM00086 677 717 0.52 T 15-10-2018 IPR001610 PAC motif THII_1020 db54b434deec4cb4126024a1076f2760 1208 SMART SM00086 540 581 0.033 T 15-10-2018 IPR001610 PAC motif THII_1020 db54b434deec4cb4126024a1076f2760 1208 SMART SM00448 990 1103 4.4E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1020 db54b434deec4cb4126024a1076f2760 1208 Gene3D G3DSA:1.10.287.130 732 810 1.1E-28 T 15-10-2018 THII_1020 db54b434deec4cb4126024a1076f2760 1208 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 330 458 2.0E-10 T 15-10-2018 IPR000014 PAS domain THII_1020 db54b434deec4cb4126024a1076f2760 1208 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 467 586 3.1E-15 T 15-10-2018 IPR000014 PAS domain THII_1020 db54b434deec4cb4126024a1076f2760 1208 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 609 723 5.0E-14 T 15-10-2018 IPR000014 PAS domain THII_1020 db54b434deec4cb4126024a1076f2760 1208 Gene3D G3DSA:3.30.450.20 322 465 3.4E-22 T 15-10-2018 THII_1020 db54b434deec4cb4126024a1076f2760 1208 SMART SM00388 744 810 4.7E-25 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1020 db54b434deec4cb4126024a1076f2760 1208 Gene3D G3DSA:3.30.450.350 58 251 1.7E-24 T 15-10-2018 THII_2458 736aa72d31a026f5eacd18d735193248 150 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.4E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2458 736aa72d31a026f5eacd18d735193248 150 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2458 736aa72d31a026f5eacd18d735193248 150 SUPERFAMILY SSF54523 7 149 2.09E-22 T 15-10-2018 THII_2458 736aa72d31a026f5eacd18d735193248 150 Gene3D G3DSA:3.30.700.10 7 150 4.0E-28 T 15-10-2018 THII_2458 736aa72d31a026f5eacd18d735193248 150 Pfam PF00114 Pilin (bacterial filament) 36 149 1.1E-6 T 15-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 THII_2458 736aa72d31a026f5eacd18d735193248 150 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 5.3E-11 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 386 448 7.7E-8 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 SUPERFAMILY SSF50156 388 474 6.44E-11 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 SUPERFAMILY SSF50494 12 283 4.22E-67 T 15-10-2018 IPR009003 Peptidase S1, PA clan THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 Gene3D G3DSA:2.30.42.10 391 479 5.4E-15 T 15-10-2018 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 Gene3D G3DSA:2.40.10.120 28 266 5.3E-83 T 15-10-2018 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 SMART SM00228 273 355 3.9E-9 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 SMART SM00228 388 467 2.1E-11 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 SUPERFAMILY SSF50156 254 363 5.39E-21 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 Pfam PF13365 Trypsin-like peptidase domain 101 234 2.4E-33 T 15-10-2018 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 29 473 3.0E-152 T 15-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 PRINTS PR00834 HtrA/DegQ protease family signature 110 122 1.8E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 PRINTS PR00834 HtrA/DegQ protease family signature 171 195 1.8E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 1.8E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 1.8E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 PRINTS PR00834 HtrA/DegQ protease family signature 313 325 1.8E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 PRINTS PR00834 HtrA/DegQ protease family signature 131 151 1.8E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 Gene3D G3DSA:2.30.42.10 268 377 3.3E-26 T 15-10-2018 THII_2491 c0f9dd50addbec9c66d9289de7daf314 480 Pfam PF13180 PDZ domain 275 363 2.3E-16 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_1900 691bd24912731f46232216764ae24c4f 275 SUPERFAMILY SSF53335 20 263 2.32E-41 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1900 691bd24912731f46232216764ae24c4f 275 Pfam PF13649 Methyltransferase domain 64 161 1.5E-15 T 15-10-2018 THII_1900 691bd24912731f46232216764ae24c4f 275 Gene3D G3DSA:3.40.50.150 43 261 8.8E-59 T 15-10-2018 THII_1900 691bd24912731f46232216764ae24c4f 275 Gene3D G3DSA:3.30.46.10 35 219 8.8E-59 T 15-10-2018 THII_1900 691bd24912731f46232216764ae24c4f 275 PIRSF PIRSF000385 201 265 0.1 T 15-10-2018 IPR014369 Glycine/Sarcosine N-methyltransferase GO:0017174 Reactome: R-HSA-2408508|Reactome: R-HSA-389661 THII_1900 691bd24912731f46232216764ae24c4f 275 PIRSF PIRSF000385 17 195 2.1E-30 T 15-10-2018 IPR014369 Glycine/Sarcosine N-methyltransferase GO:0017174 Reactome: R-HSA-2408508|Reactome: R-HSA-389661 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 315 40.706 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 5.2E-21 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 5.2E-21 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 278 301 5.2E-21 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 5.2E-21 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 Gene3D G3DSA:3.40.50.1370 22 308 2.9E-90 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 157 2.7E-39 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 166 311 6.7E-25 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 14 313 1.3E-92 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 2.0E-34 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 275 2.0E-34 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 144 161 2.0E-34 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 2.0E-34 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 229 238 2.0E-34 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 294 308 2.0E-34 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 SUPERFAMILY SSF53671 11 314 1.96E-94 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 THII_0647 f13bc40ca80ad19fd8a513318666167a 323 Gene3D G3DSA:3.40.50.1370 145 292 2.9E-90 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 THII_3330 2ff77826d70fd603e4e37ae150d69bd1 135 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 9 133 1.3E-43 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 THII_3330 2ff77826d70fd603e4e37ae150d69bd1 135 SUPERFAMILY SSF111038 4 134 1.57E-47 T 15-10-2018 IPR035917 YjbQ-like superfamily THII_3330 2ff77826d70fd603e4e37ae150d69bd1 135 Gene3D G3DSA:2.60.120.460 1 134 1.5E-42 T 15-10-2018 IPR035917 YjbQ-like superfamily THII_3330 2ff77826d70fd603e4e37ae150d69bd1 135 Pfam PF01894 Uncharacterised protein family UPF0047 16 133 1.6E-39 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 THII_3330 2ff77826d70fd603e4e37ae150d69bd1 135 PIRSF PIRSF004681 1 135 1.5E-49 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 THII_3330 2ff77826d70fd603e4e37ae150d69bd1 135 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 97 115 - T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 THII_0306 869906d2febe2b7ec29d8f72849cee85 220 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 1.3E-96 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 THII_0306 869906d2febe2b7ec29d8f72849cee85 220 SMART SM00322 60 125 8.2E-9 T 15-10-2018 IPR004087 K Homology domain GO:0003676 THII_0306 869906d2febe2b7ec29d8f72849cee85 220 Gene3D G3DSA:3.30.300.20 17 107 8.3E-30 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta THII_0306 869906d2febe2b7ec29d8f72849cee85 220 SUPERFAMILY SSF54821 108 206 3.14E-40 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0306 869906d2febe2b7ec29d8f72849cee85 220 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.9E-41 T 15-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0306 869906d2febe2b7ec29d8f72849cee85 220 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 15-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0306 869906d2febe2b7ec29d8f72849cee85 220 Gene3D G3DSA:3.30.1140.32 108 208 3.4E-44 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0306 869906d2febe2b7ec29d8f72849cee85 220 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.264 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 THII_0306 869906d2febe2b7ec29d8f72849cee85 220 Pfam PF07650 KH domain 38 111 3.3E-19 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0306 869906d2febe2b7ec29d8f72849cee85 220 SUPERFAMILY SSF54814 2 106 2.06E-38 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 THII_0931 7a9c951b42cfc9c453516a83f50e9b03 211 Gene3D G3DSA:3.20.20.70 2 211 2.6E-71 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0931 7a9c951b42cfc9c453516a83f50e9b03 211 PIRSF PIRSF000370 1 211 2.4E-36 T 15-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 THII_0931 7a9c951b42cfc9c453516a83f50e9b03 211 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 211 32.79 T 15-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 THII_0931 7a9c951b42cfc9c453516a83f50e9b03 211 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 210 3.5E-105 T 15-10-2018 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 THII_0931 7a9c951b42cfc9c453516a83f50e9b03 211 SUPERFAMILY SSF102114 46 134 6.67E-7 T 15-10-2018 THII_3429 96ebc6d0c1ebe05096fac16a1fd54c7c 322 Gene3D G3DSA:3.30.2350.10 93 317 1.1E-76 T 15-10-2018 THII_3429 96ebc6d0c1ebe05096fac16a1fd54c7c 322 SMART SM00363 23 78 1.7E-4 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_3429 96ebc6d0c1ebe05096fac16a1fd54c7c 322 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_3429 96ebc6d0c1ebe05096fac16a1fd54c7c 322 Pfam PF01479 S4 domain 23 69 1.5E-6 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_3429 96ebc6d0c1ebe05096fac16a1fd54c7c 322 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 314 6.2E-83 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_3429 96ebc6d0c1ebe05096fac16a1fd54c7c 322 SUPERFAMILY SSF55120 93 315 8.96E-64 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_3429 96ebc6d0c1ebe05096fac16a1fd54c7c 322 Pfam PF00849 RNA pseudouridylate synthase 103 251 6.3E-30 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_3429 96ebc6d0c1ebe05096fac16a1fd54c7c 322 SUPERFAMILY SSF55174 22 74 2.28E-7 T 15-10-2018 THII_3429 96ebc6d0c1ebe05096fac16a1fd54c7c 322 Gene3D G3DSA:3.10.290.10 12 74 6.9E-15 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.8E-20 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 SMART SM00841 131 186 1.3E-34 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 SUPERFAMILY SSF50249 69 128 6.0E-15 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 Gene3D G3DSA:2.40.50.140 66 127 1.0E-27 T 15-10-2018 THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.482 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 SUPERFAMILY SSF50249 130 187 9.77E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 SUPERFAMILY SSF50104 2 63 8.53E-21 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 1.6E-26 T 15-10-2018 IPR013185 Translation elongation factor, KOW-like THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 PIRSF PIRSF005901 2 188 1.7E-66 T 15-10-2018 IPR020599 Translation elongation factor P/YeiP THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 SMART SM01185 69 123 4.9E-22 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 Gene3D G3DSA:2.40.50.140 130 187 7.7E-29 T 15-10-2018 THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 6.3E-77 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.7E-28 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 Gene3D G3DSA:2.30.30.30 1 64 2.0E-27 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 THII_0417 aaf3c980384e8bd6d222e7e7c863d90d 189 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 15-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site THII_2000 c8d35bdac7dcb4f6fed38ad83949319e 135 Gene3D G3DSA:3.40.50.1010 1 132 7.5E-36 T 15-10-2018 THII_2000 c8d35bdac7dcb4f6fed38ad83949319e 135 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 129 10.515 T 15-10-2018 IPR022907 VapC family GO:0004540 THII_2000 c8d35bdac7dcb4f6fed38ad83949319e 135 SUPERFAMILY SSF88723 2 132 5.33E-31 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2000 c8d35bdac7dcb4f6fed38ad83949319e 135 Pfam PF01850 PIN domain 3 123 2.8E-15 T 15-10-2018 IPR002716 PIN domain THII_2000 c8d35bdac7dcb4f6fed38ad83949319e 135 SMART SM00670 1 121 8.1E-7 T 15-10-2018 IPR002716 PIN domain THII_2257 a09742c1f110cb1f7eeaf59c16ea8757 318 Pfam PF13408 Recombinase zinc beta ribbon domain 80 136 1.5E-14 T 15-10-2018 IPR025827 Recombinase zinc beta ribbon domain THII_2257 a09742c1f110cb1f7eeaf59c16ea8757 318 Pfam PF07508 Recombinase 4 65 1.9E-9 T 15-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 THII_1030 7106716865af788466baced64e609a59 219 Pfam PF00694 Aconitase C-terminal domain 1 132 6.5E-38 T 15-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 THII_1030 7106716865af788466baced64e609a59 219 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 9.6E-81 T 15-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 THII_1030 7106716865af788466baced64e609a59 219 Gene3D G3DSA:3.20.19.10 1 184 8.3E-76 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 THII_1030 7106716865af788466baced64e609a59 219 SUPERFAMILY SSF52016 1 204 9.61E-63 T 15-10-2018 THII_1030 7106716865af788466baced64e609a59 219 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.963 T 15-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 THII_0445 97245905f55d7913a1aeebbd818ab366 289 Pfam PF04545 Sigma-70, region 4 232 283 1.4E-15 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 THII_0445 97245905f55d7913a1aeebbd818ab366 289 PRINTS PR00046 Major sigma-70 factor signature 255 270 8.6E-18 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_0445 97245905f55d7913a1aeebbd818ab366 289 PRINTS PR00046 Major sigma-70 factor signature 81 94 8.6E-18 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_0445 97245905f55d7913a1aeebbd818ab366 289 PRINTS PR00046 Major sigma-70 factor signature 270 281 8.6E-18 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_0445 97245905f55d7913a1aeebbd818ab366 289 PRINTS PR00046 Major sigma-70 factor signature 236 248 8.6E-18 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_0445 97245905f55d7913a1aeebbd818ab366 289 Gene3D G3DSA:1.20.120.1810 18 126 6.7E-28 T 15-10-2018 THII_0445 97245905f55d7913a1aeebbd818ab366 289 PIRSF PIRSF000770 4 286 7.5E-35 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_0445 97245905f55d7913a1aeebbd818ab366 289 SUPERFAMILY SSF88659 192 285 1.79E-17 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_0445 97245905f55d7913a1aeebbd818ab366 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 285 4.6E-33 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 THII_0445 97245905f55d7913a1aeebbd818ab366 289 Pfam PF04542 Sigma-70 region 2 57 126 1.4E-16 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 THII_0445 97245905f55d7913a1aeebbd818ab366 289 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 6 287 51.193 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 THII_0445 97245905f55d7913a1aeebbd818ab366 289 SUPERFAMILY SSF88946 15 126 2.35E-39 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 THII_0445 97245905f55d7913a1aeebbd818ab366 289 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 81 94 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_0445 97245905f55d7913a1aeebbd818ab366 289 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 255 281 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_0445 97245905f55d7913a1aeebbd818ab366 289 Gene3D G3DSA:1.20.140.160 133 287 9.7E-17 T 15-10-2018 THII_0445 97245905f55d7913a1aeebbd818ab366 289 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 19 286 3.0E-122 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 THII_3427 3e6acd907fabf7928fe07b1ab5f7551b 951 Pfam PF00025 ADP-ribosylation factor family 43 179 7.2E-8 T 15-10-2018 IPR006689 Small GTPase superfamily, ARF/SAR type GO:0005525 THII_3427 3e6acd907fabf7928fe07b1ab5f7551b 951 Gene3D G3DSA:3.40.50.300 1 192 4.0E-43 T 15-10-2018 THII_3427 3e6acd907fabf7928fe07b1ab5f7551b 951 SUPERFAMILY SSF52540 14 189 2.91E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 559 619 3.5E-22 T 15-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 Pfam PF00204 DNA gyrase B 247 383 6.1E-39 T 15-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 Gene3D G3DSA:3.40.50.670 389 622 7.1E-85 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 SUPERFAMILY SSF54211 217 381 1.44E-42 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 Pfam PF01751 Toprim domain 412 521 8.3E-13 T 15-10-2018 IPR006171 TOPRIM domain THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 SMART SM00387 27 173 4.8E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 627 45.416 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 1.0E-100 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 Gene3D G3DSA:3.30.230.10 216 388 1.1E-51 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 SUPERFAMILY SSF56719 387 620 7.32E-73 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-58 T 15-10-2018 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.1E-58 T 15-10-2018 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR00418 DNA topoisomerase II family signature 265 278 1.1E-58 T 15-10-2018 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR00418 DNA topoisomerase II family signature 516 528 1.1E-58 T 15-10-2018 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR00418 DNA topoisomerase II family signature 478 494 1.1E-58 T 15-10-2018 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-58 T 15-10-2018 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR00418 DNA topoisomerase II family signature 496 513 1.1E-58 T 15-10-2018 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR00418 DNA topoisomerase II family signature 561 577 1.1E-58 T 15-10-2018 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 PRINTS PR00418 DNA topoisomerase II family signature 413 427 1.1E-58 T 15-10-2018 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 15-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 623 8.8E-298 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 SUPERFAMILY SSF55874 4 215 5.48E-65 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 170 2.7E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 SMART SM00433 34 623 4.0E-199 T 15-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_1834 c0b93b45b8f86d9c5ed62b3d45e7dd0a 632 Gene3D G3DSA:3.30.565.10 2 215 1.6E-75 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 642 2.3E-197 T 15-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 Pfam PF00384 Molybdopterin oxidoreductase 272 642 5.3E-38 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 121 1.7E-16 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 75 1.1E-19 T 15-10-2018 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 SMART SM00929 83 123 2.9E-20 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 SUPERFAMILY SSF54862 76 210 4.18E-36 T 15-10-2018 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 Gene3D G3DSA:3.40.50.740 542 693 1.2E-16 T 15-10-2018 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 Gene3D G3DSA:3.40.50.740 277 348 1.1E-22 T 15-10-2018 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 SUPERFAMILY SSF53706 213 667 1.44E-88 T 15-10-2018 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 SUPERFAMILY SSF54292 1 74 5.89E-20 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 Gene3D G3DSA:3.10.20.740 1 123 1.4E-41 T 15-10-2018 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 Gene3D G3DSA:3.40.228.10 349 414 1.1E-22 T 15-10-2018 THII_2954 db0c5b7b0dff1fd137e1d8464d9010d1 792 Gene3D G3DSA:3.30.70.20 125 204 3.6E-8 T 15-10-2018 THII_0255 1efc5ec3763b5b14c86c377779fb15f7 309 Gene3D G3DSA:3.30.1300.30 45 293 3.2E-72 T 15-10-2018 THII_0255 1efc5ec3763b5b14c86c377779fb15f7 309 PIRSF PIRSF002786 4 308 1.6E-77 T 15-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 THII_0255 1efc5ec3763b5b14c86c377779fb15f7 309 Gene3D G3DSA:1.10.40.60 101 207 3.2E-72 T 15-10-2018 IPR038072 GspK, central domain superfamily THII_0255 1efc5ec3763b5b14c86c377779fb15f7 309 SUPERFAMILY SSF158544 103 206 1.78E-28 T 15-10-2018 IPR038072 GspK, central domain superfamily THII_0255 1efc5ec3763b5b14c86c377779fb15f7 309 Gene3D G3DSA:1.10.40.60 208 268 3.2E-72 T 15-10-2018 IPR038072 GspK, central domain superfamily THII_0255 1efc5ec3763b5b14c86c377779fb15f7 309 SUPERFAMILY SSF81585 197 251 1.24E-5 T 15-10-2018 THII_0255 1efc5ec3763b5b14c86c377779fb15f7 309 Pfam PF03934 Type II secretion system (T2SS), protein K 32 298 1.3E-82 T 15-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 THII_0255 1efc5ec3763b5b14c86c377779fb15f7 309 SUPERFAMILY SSF54523 39 303 1.52E-19 T 15-10-2018 THII_1774 1bde1c8c4852bceb89b800b9e0a5b3c4 487 Gene3D G3DSA:3.40.50.300 61 306 3.8E-35 T 15-10-2018 THII_1774 1bde1c8c4852bceb89b800b9e0a5b3c4 487 SUPERFAMILY SSF52540 58 255 7.06E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1774 1bde1c8c4852bceb89b800b9e0a5b3c4 487 Pfam PF00350 Dynamin family 61 207 3.6E-10 T 15-10-2018 IPR022812 Dynamin superfamily THII_2054 c24b677ae35f5f59dfedb56f54bf4cff 1953 SUPERFAMILY SSF48239 1426 1704 3.84E-19 T 15-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid THII_2054 c24b677ae35f5f59dfedb56f54bf4cff 1953 Pfam PF00207 Alpha-2-macroglobulin family 1215 1302 1.1E-17 T 15-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 THII_2054 c24b677ae35f5f59dfedb56f54bf4cff 1953 SMART SM01359 996 1152 2.1E-28 T 15-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 THII_2054 c24b677ae35f5f59dfedb56f54bf4cff 1953 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 996 1152 2.0E-14 T 15-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 THII_2054 c24b677ae35f5f59dfedb56f54bf4cff 1953 Gene3D G3DSA:1.50.10.20 1416 1704 4.5E-18 T 15-10-2018 THII_2054 c24b677ae35f5f59dfedb56f54bf4cff 1953 Pfam PF01835 MG2 domain 630 719 1.7E-12 T 15-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 THII_2054 c24b677ae35f5f59dfedb56f54bf4cff 1953 SMART SM01360 1214 1303 1.6E-25 T 15-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Pfam PF00512 His Kinase A (phospho-acceptor) domain 511 578 7.0E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SMART SM00065 274 421 3.7E-7 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Pfam PF13185 GAF domain 277 411 1.0E-14 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Gene3D G3DSA:3.40.50.2300 913 1054 4.4E-14 T 15-10-2018 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Gene3D G3DSA:3.30.565.10 579 749 2.8E-50 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SUPERFAMILY SSF52172 1062 1181 7.54E-34 T 15-10-2018 IPR011006 CheY-like superfamily THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Gene3D G3DSA:3.40.50.12740 1061 1182 5.8E-38 T 15-10-2018 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Gene3D G3DSA:3.40.50.12740 797 912 1.9E-21 T 15-10-2018 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 625 748 1.9E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Gene3D G3DSA:1.10.287.130 497 578 4.9E-23 T 15-10-2018 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SMART SM00448 1063 1177 4.2E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SMART SM00448 917 1031 0.014 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SMART SM00448 795 905 4.7E-13 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SUPERFAMILY SSF55874 567 747 1.96E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SUPERFAMILY SSF55781 240 412 8.69E-26 T 15-10-2018 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SMART SM00388 510 578 9.6E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Pfam PF00072 Response regulator receiver domain 1065 1176 9.5E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Pfam PF00072 Response regulator receiver domain 920 1030 4.1E-11 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Pfam PF00072 Response regulator receiver domain 798 904 3.4E-13 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SUPERFAMILY SSF47384 497 580 9.02E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 Gene3D G3DSA:3.30.450.40 246 417 5.4E-20 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SMART SM00387 625 749 8.9E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SUPERFAMILY SSF52172 919 1047 7.26E-14 T 15-10-2018 IPR011006 CheY-like superfamily THII_0750 19918b92abfae25c3f35e4861049c67b 1182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 702 2.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 727 2.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 733 746 2.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 674 688 2.6E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0750 19918b92abfae25c3f35e4861049c67b 1182 SUPERFAMILY SSF52172 797 908 3.98E-21 T 15-10-2018 IPR011006 CheY-like superfamily THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Gene3D G3DSA:2.40.50.100 1197 1260 1.4E-57 T 15-10-2018 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Gene3D G3DSA:1.10.274.100 490 653 4.8E-37 T 15-10-2018 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Gene3D G3DSA:1.10.132.30 654 806 2.9E-50 T 15-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 SMART SM00663 235 514 5.9E-156 T 15-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Pfam PF04998 RNA polymerase Rpb1, domain 5 782 1365 6.2E-65 T 15-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1417 0.0 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 12 1419 17.64 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 656 7.6E-20 T 15-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.3E-81 T 15-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Gene3D G3DSA:1.10.150.390 1366 1419 2.4E-23 T 15-10-2018 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 SUPERFAMILY SSF64484 16 1413 0.0 T 15-10-2018 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Gene3D G3DSA:1.10.40.90 374 416 2.8E-14 T 15-10-2018 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Gene3D G3DSA:2.40.50.100 1069 1171 2.7E-27 T 15-10-2018 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Gene3D G3DSA:2.40.50.100 1012 1068 4.4E-14 T 15-10-2018 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Pfam PF05000 RNA polymerase Rpb1, domain 4 687 776 7.2E-9 T 15-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Gene3D G3DSA:1.10.1790.20 1181 1364 1.4E-57 T 15-10-2018 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 387 3.1E-7 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0330 bc97b61f9d4359079ef416b54c694694 1419 Pfam PF00623 RNA polymerase Rpb1, domain 2 396 485 3.0E-22 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0148 64785e8f152e58661331de64403f6a48 434 SUPERFAMILY SSF109998 251 427 9.16E-42 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily THII_0148 64785e8f152e58661331de64403f6a48 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 238 1.4E-8 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain THII_0148 64785e8f152e58661331de64403f6a48 434 TIGRFAM TIGR00115 tig: trigger factor 11 410 1.2E-121 T 15-10-2018 IPR005215 Trigger factor GO:0015031 THII_0148 64785e8f152e58661331de64403f6a48 434 Gene3D G3DSA:3.30.70.1050 1 117 2.7E-36 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 THII_0148 64785e8f152e58661331de64403f6a48 434 Hamap MF_00303 Trigger factor [tig]. 1 416 19.585 T 15-10-2018 IPR005215 Trigger factor GO:0015031 THII_0148 64785e8f152e58661331de64403f6a48 434 Gene3D G3DSA:3.10.50.40 152 249 5.7E-88 T 15-10-2018 THII_0148 64785e8f152e58661331de64403f6a48 434 PIRSF PIRSF003095 1 432 1.7E-116 T 15-10-2018 IPR005215 Trigger factor GO:0015031 THII_0148 64785e8f152e58661331de64403f6a48 434 SUPERFAMILY SSF102735 1 130 2.22E-33 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 THII_0148 64785e8f152e58661331de64403f6a48 434 SUPERFAMILY SSF54534 105 244 1.96E-23 T 15-10-2018 THII_0148 64785e8f152e58661331de64403f6a48 434 Gene3D G3DSA:1.10.3120.10 118 414 5.7E-88 T 15-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 THII_0148 64785e8f152e58661331de64403f6a48 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 8.6E-36 T 15-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 THII_0148 64785e8f152e58661331de64403f6a48 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 266 410 2.2E-29 T 15-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 THII_3472 3959318c89ebfaee62e8f6dfbd4fbf9b 165 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 15-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 THII_3472 3959318c89ebfaee62e8f6dfbd4fbf9b 165 Gene3D G3DSA:3.40.430.10 1 165 2.9E-55 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 THII_3472 3959318c89ebfaee62e8f6dfbd4fbf9b 165 PIRSF PIRSF000194 1 162 3.7E-57 T 15-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 THII_3472 3959318c89ebfaee62e8f6dfbd4fbf9b 165 SUPERFAMILY SSF53597 1 159 3.32E-54 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 THII_3472 3959318c89ebfaee62e8f6dfbd4fbf9b 165 Pfam PF00186 Dihydrofolate reductase 1 159 9.9E-58 T 15-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 THII_3472 3959318c89ebfaee62e8f6dfbd4fbf9b 165 PRINTS PR00070 Dihydrofolate reductase signature 91 105 3.6E-13 T 15-10-2018 THII_3472 3959318c89ebfaee62e8f6dfbd4fbf9b 165 PRINTS PR00070 Dihydrofolate reductase signature 13 23 3.6E-13 T 15-10-2018 THII_3472 3959318c89ebfaee62e8f6dfbd4fbf9b 165 PRINTS PR00070 Dihydrofolate reductase signature 27 35 3.6E-13 T 15-10-2018 THII_3472 3959318c89ebfaee62e8f6dfbd4fbf9b 165 PRINTS PR00070 Dihydrofolate reductase signature 40 51 3.6E-13 T 15-10-2018 THII_0982 9ccddc8116518ebe9395053de113265b 473 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 218 454 1.3E-96 T 15-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 THII_0982 9ccddc8116518ebe9395053de113265b 473 SUPERFAMILY SSF75615 114 207 8.63E-26 T 15-10-2018 THII_0982 9ccddc8116518ebe9395053de113265b 473 SUPERFAMILY SSF53790 213 465 3.66E-86 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 THII_0982 9ccddc8116518ebe9395053de113265b 473 Hamap MF_01646 Siroheme synthase [cysG]. 1 463 52.174 T 15-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 THII_0982 9ccddc8116518ebe9395053de113265b 473 Gene3D G3DSA:3.30.950.10 334 471 8.6E-47 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 THII_0982 9ccddc8116518ebe9395053de113265b 473 Gene3D G3DSA:1.10.8.210 150 210 2.8E-6 T 15-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 THII_0982 9ccddc8116518ebe9395053de113265b 473 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 298 331 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 THII_0982 9ccddc8116518ebe9395053de113265b 473 Pfam PF10414 Sirohaem synthase dimerisation region 150 206 1.3E-20 T 15-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 THII_0982 9ccddc8116518ebe9395053de113265b 473 Gene3D G3DSA:3.40.1010.10 217 333 1.6E-46 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 THII_0982 9ccddc8116518ebe9395053de113265b 473 SUPERFAMILY SSF51735 1 113 1.97E-24 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0982 9ccddc8116518ebe9395053de113265b 473 Pfam PF13241 Putative NAD(P)-binding 6 115 9.7E-28 T 15-10-2018 THII_0982 9ccddc8116518ebe9395053de113265b 473 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 3.4E-11 T 15-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 THII_0982 9ccddc8116518ebe9395053de113265b 473 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 4.2E-70 T 15-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 THII_0982 9ccddc8116518ebe9395053de113265b 473 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 220 430 1.9E-54 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 THII_0982 9ccddc8116518ebe9395053de113265b 473 Gene3D G3DSA:3.30.160.110 113 148 9.2E-18 T 15-10-2018 THII_0982 9ccddc8116518ebe9395053de113265b 473 PIRSF PIRSF036426 1 470 2.1E-199 T 15-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 THII_0982 9ccddc8116518ebe9395053de113265b 473 Gene3D G3DSA:3.40.50.720 1 112 6.9E-34 T 15-10-2018 THII_1338 50a2a595c11b56ec72e6e598cc2e9483 117 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 15-10-2018 IPR019808 Histidine triad, conserved site THII_1338 50a2a595c11b56ec72e6e598cc2e9483 117 Pfam PF11969 Scavenger mRNA decapping enzyme C-term binding 6 106 6.0E-24 T 15-10-2018 THII_1338 50a2a595c11b56ec72e6e598cc2e9483 117 SUPERFAMILY SSF54197 3 111 3.83E-34 T 15-10-2018 IPR036265 HIT-like superfamily THII_1338 50a2a595c11b56ec72e6e598cc2e9483 117 PRINTS PR00332 Histidine triad family signature 95 105 5.6E-16 T 15-10-2018 IPR001310 Histidine triad (HIT) protein THII_1338 50a2a595c11b56ec72e6e598cc2e9483 117 PRINTS PR00332 Histidine triad family signature 28 46 5.6E-16 T 15-10-2018 IPR001310 Histidine triad (HIT) protein THII_1338 50a2a595c11b56ec72e6e598cc2e9483 117 PRINTS PR00332 Histidine triad family signature 7 23 5.6E-16 T 15-10-2018 IPR001310 Histidine triad (HIT) protein THII_1338 50a2a595c11b56ec72e6e598cc2e9483 117 Gene3D G3DSA:3.30.428.10 1 112 6.9E-35 T 15-10-2018 IPR036265 HIT-like superfamily THII_2795 255d32f0b4e2f98d2c28414069180db5 384 Pfam PF05175 Methyltransferase small domain 137 220 9.0E-10 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 THII_2795 255d32f0b4e2f98d2c28414069180db5 384 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 213 219 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 THII_2795 255d32f0b4e2f98d2c28414069180db5 384 SUPERFAMILY SSF53335 136 286 1.45E-21 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2795 255d32f0b4e2f98d2c28414069180db5 384 Gene3D G3DSA:3.40.50.150 111 344 4.6E-22 T 15-10-2018 THII_0716 698104e834949826293514d2fd76ef26 693 SUPERFAMILY SSF53448 155 355 2.53E-27 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0716 698104e834949826293514d2fd76ef26 693 Gene3D G3DSA:3.90.550.10 393 634 6.4E-50 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0716 698104e834949826293514d2fd76ef26 693 Gene3D G3DSA:3.90.550.10 121 389 5.2E-36 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0716 698104e834949826293514d2fd76ef26 693 SUPERFAMILY SSF53448 406 653 2.44E-51 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0716 698104e834949826293514d2fd76ef26 693 Pfam PF00535 Glycosyl transferase family 2 169 313 4.4E-9 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0716 698104e834949826293514d2fd76ef26 693 Pfam PF00535 Glycosyl transferase family 2 407 586 3.2E-25 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0846 415624df3fb1b0953a79b4006402d158 691 Gene3D G3DSA:3.40.50.1000 499 567 2.6E-24 T 15-10-2018 IPR023214 HAD superfamily THII_0846 415624df3fb1b0953a79b4006402d158 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 1.9E-23 T 15-10-2018 THII_0846 415624df3fb1b0953a79b4006402d158 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 558 1.9E-23 T 15-10-2018 THII_0846 415624df3fb1b0953a79b4006402d158 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 155 169 1.9E-23 T 15-10-2018 THII_0846 415624df3fb1b0953a79b4006402d158 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 523 542 1.9E-23 T 15-10-2018 THII_0846 415624df3fb1b0953a79b4006402d158 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 470 480 1.9E-23 T 15-10-2018 THII_0846 415624df3fb1b0953a79b4006402d158 691 Gene3D G3DSA:2.70.150.20 104 213 1.2E-25 T 15-10-2018 THII_0846 415624df3fb1b0953a79b4006402d158 691 Pfam PF00702 haloacid dehalogenase-like hydrolase 308 537 3.8E-31 T 15-10-2018 THII_0846 415624df3fb1b0953a79b4006402d158 691 Gene3D G3DSA:3.40.1110.10 323 458 4.2E-51 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 THII_0846 415624df3fb1b0953a79b4006402d158 691 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 9 687 40.805 T 15-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 THII_0846 415624df3fb1b0953a79b4006402d158 691 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 314 320 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 THII_0846 415624df3fb1b0953a79b4006402d158 691 SUPERFAMILY SSF56784 310 574 1.31E-36 T 15-10-2018 IPR036412 HAD-like superfamily THII_0846 415624df3fb1b0953a79b4006402d158 691 Gene3D G3DSA:1.20.1110.10 568 618 2.6E-24 T 15-10-2018 THII_0846 415624df3fb1b0953a79b4006402d158 691 SUPERFAMILY SSF81653 114 208 2.62E-21 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 THII_0846 415624df3fb1b0953a79b4006402d158 691 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 73 333 5.7E-32 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 THII_0846 415624df3fb1b0953a79b4006402d158 691 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 379 611 7.1E-46 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 THII_0846 415624df3fb1b0953a79b4006402d158 691 SUPERFAMILY SSF81665 30 306 6.93E-12 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 THII_0846 415624df3fb1b0953a79b4006402d158 691 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 6 683 0.0 T 15-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 THII_0846 415624df3fb1b0953a79b4006402d158 691 SUPERFAMILY SSF81660 323 457 9.16E-34 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 THII_0846 415624df3fb1b0953a79b4006402d158 691 Pfam PF00122 E1-E2 ATPase 116 291 1.3E-30 T 15-10-2018 THII_1888 886396943fb37fe49535f8bbce3482b6 198 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 193 26.185 T 15-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 THII_1888 886396943fb37fe49535f8bbce3482b6 198 SUPERFAMILY SSF53448 6 189 2.02E-28 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1888 886396943fb37fe49535f8bbce3482b6 198 Gene3D G3DSA:3.90.550.10 3 197 3.3E-49 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1888 886396943fb37fe49535f8bbce3482b6 198 Pfam PF12804 MobA-like NTP transferase domain 9 163 1.9E-31 T 15-10-2018 IPR025877 MobA-like NTP transferase THII_1888 886396943fb37fe49535f8bbce3482b6 198 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 190 5.2E-65 T 15-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 PIRSF PIRSF000904 2 337 1.0E-126 T 15-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 Gene3D G3DSA:3.40.190.80 198 334 4.2E-52 T 15-10-2018 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 7 195 2.6E-65 T 15-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 Gene3D G3DSA:3.30.540.10 1 197 9.8E-75 T 15-10-2018 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 31 58 4.8E-69 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 207 234 4.8E-69 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 150 173 4.8E-69 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 181 204 4.8E-69 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 309 334 4.8E-69 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 68 94 4.8E-69 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 PIRSF PIRSF500210 2 337 7.1E-128 T 15-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 6 335 46.342 T 15-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 THII_0214 3b8bc86a1cb2316926c6270d1ff81a56 337 SUPERFAMILY SSF56655 3 333 1.23E-116 T 15-10-2018 THII_3320 786f91614277112101a3f3e2a17c9c01 280 Pfam PF00005 ABC transporter 49 204 3.4E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_3320 786f91614277112101a3f3e2a17c9c01 280 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_3320 786f91614277112101a3f3e2a17c9c01 280 SUPERFAMILY SSF52540 32 267 2.49E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3320 786f91614277112101a3f3e2a17c9c01 280 SMART SM00382 58 260 3.9E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3320 786f91614277112101a3f3e2a17c9c01 280 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 33 280 1.9E-124 T 15-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 THII_3320 786f91614277112101a3f3e2a17c9c01 280 Gene3D G3DSA:3.40.50.300 28 277 1.1E-65 T 15-10-2018 THII_0889 b7ac509672c64401d317be1328ec26e1 310 SUPERFAMILY SSF52540 1 211 2.61E-8 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0889 b7ac509672c64401d317be1328ec26e1 310 Pfam PF05729 NACHT domain 2 196 1.3E-8 T 15-10-2018 IPR007111 NACHT nucleoside triphosphatase THII_2115 b070f3565ea7788622851acb2802145f 782 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 106 721 8.7E-281 T 15-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 THII_2115 b070f3565ea7788622851acb2802145f 782 Gene3D G3DSA:3.20.20.80 222 618 3.6E-165 T 15-10-2018 THII_2115 b070f3565ea7788622851acb2802145f 782 Pfam PF00128 Alpha amylase, catalytic domain 274 348 5.5E-9 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 THII_2115 b070f3565ea7788622851acb2802145f 782 SUPERFAMILY SSF81296 135 192 7.42E-11 T 15-10-2018 IPR014756 Immunoglobulin E-set THII_2115 b070f3565ea7788622851acb2802145f 782 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 98 723 45.248 T 15-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 THII_2115 b070f3565ea7788622851acb2802145f 782 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 122 205 2.6E-24 T 15-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 THII_2115 b070f3565ea7788622851acb2802145f 782 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 625 722 4.3E-20 T 15-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 THII_2115 b070f3565ea7788622851acb2802145f 782 PIRSF PIRSF000463 7 733 2.8E-298 T 15-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 THII_2115 b070f3565ea7788622851acb2802145f 782 Gene3D G3DSA:2.60.40.1180 621 725 6.9E-35 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta THII_2115 b070f3565ea7788622851acb2802145f 782 SUPERFAMILY SSF81296 14 110 3.8E-15 T 15-10-2018 IPR014756 Immunoglobulin E-set THII_2115 b070f3565ea7788622851acb2802145f 782 SUPERFAMILY SSF51445 177 613 3.79E-116 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily THII_2115 b070f3565ea7788622851acb2802145f 782 SMART SM00642 249 593 1.2E-6 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 THII_2115 b070f3565ea7788622851acb2802145f 782 SUPERFAMILY SSF51011 621 723 9.35E-32 T 15-10-2018 THII_2115 b070f3565ea7788622851acb2802145f 782 Gene3D G3DSA:2.60.40.10 4 220 1.0E-75 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2805 003b7984ed48966f905a253d067d8c69 412 Pfam PF01494 FAD binding domain 5 325 2.7E-31 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 THII_2805 003b7984ed48966f905a253d067d8c69 412 Gene3D G3DSA:3.50.50.60 7 350 4.7E-111 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2805 003b7984ed48966f905a253d067d8c69 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 167 182 1.4E-19 T 15-10-2018 THII_2805 003b7984ed48966f905a253d067d8c69 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.4E-19 T 15-10-2018 THII_2805 003b7984ed48966f905a253d067d8c69 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 307 1.4E-19 T 15-10-2018 THII_2805 003b7984ed48966f905a253d067d8c69 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 323 1.4E-19 T 15-10-2018 THII_2805 003b7984ed48966f905a253d067d8c69 412 SUPERFAMILY SSF51905 5 397 9.2E-62 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2805 003b7984ed48966f905a253d067d8c69 412 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 402 5.0E-132 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 THII_2805 003b7984ed48966f905a253d067d8c69 412 Gene3D G3DSA:3.30.9.50 89 281 4.7E-111 T 15-10-2018 THII_0339 e9c332795f9ca09d9cab3881d9ebe3eb 613 Pfam PF00092 von Willebrand factor type A domain 451 579 1.2E-7 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_0339 e9c332795f9ca09d9cab3881d9ebe3eb 613 Gene3D G3DSA:3.40.50.410 421 603 4.7E-15 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_0339 e9c332795f9ca09d9cab3881d9ebe3eb 613 SUPERFAMILY SSF53300 421 603 1.46E-19 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_0339 e9c332795f9ca09d9cab3881d9ebe3eb 613 SMART SM00327 420 610 3.0E-18 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 SUPERFAMILY SSF103190 165 238 2.04E-5 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 Pfam PF00672 HAMP domain 384 433 4.0E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 Pfam PF02743 Cache domain 57 346 5.6E-26 T 15-10-2018 IPR033479 Double Cache domain 1 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 692 1.6E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 673 1.6E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 1.6E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 Gene3D G3DSA:3.30.450.20 235 354 7.8E-22 T 15-10-2018 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 SMART SM00387 583 695 1.7E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 SUPERFAMILY SSF55874 527 693 5.89E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 584 693 1.4E-24 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 Gene3D G3DSA:3.30.450.20 175 234 7.8E-22 T 15-10-2018 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 Gene3D G3DSA:1.10.287.130 457 538 3.0E-16 T 15-10-2018 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 Gene3D G3DSA:1.20.1480.50 355 443 2.7E-15 T 15-10-2018 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 SMART SM00388 469 537 2.9E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 SUPERFAMILY SSF47384 455 539 3.34E-17 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 Pfam PF00512 His Kinase A (phospho-acceptor) domain 470 537 1.6E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 SMART SM00304 384 436 3.3E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 Gene3D G3DSA:3.30.565.10 539 695 3.5E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0350 6f3332a4aa9e1cc5dc0c2c2f133da7cc 696 SUPERFAMILY SSF158472 384 434 6.28E-11 T 15-10-2018 THII_1905 3bdbad2fb2a97760e06eacac73e2216f 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.2E-15 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1905 3bdbad2fb2a97760e06eacac73e2216f 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.2E-15 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1905 3bdbad2fb2a97760e06eacac73e2216f 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.2E-15 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1905 3bdbad2fb2a97760e06eacac73e2216f 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.2E-15 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1905 3bdbad2fb2a97760e06eacac73e2216f 71 Pfam PF01165 Ribosomal protein S21 4 56 1.7E-21 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1905 3bdbad2fb2a97760e06eacac73e2216f 71 Gene3D G3DSA:1.20.5.1150 16 54 1.0E-20 T 15-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1905 3bdbad2fb2a97760e06eacac73e2216f 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 15-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1905 3bdbad2fb2a97760e06eacac73e2216f 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.3E-23 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1905 3bdbad2fb2a97760e06eacac73e2216f 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.703 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1905 3bdbad2fb2a97760e06eacac73e2216f 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 43 3.0E-8 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0431 c29f336979441c85bf58763fd2c196e3 596 Gene3D G3DSA:4.10.80.40 548 596 4.5E-11 T 15-10-2018 THII_0431 c29f336979441c85bf58763fd2c196e3 596 SUPERFAMILY SSF56425 240 358 1.64E-41 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0431 c29f336979441c85bf58763fd2c196e3 596 SUPERFAMILY SSF51905 4 436 3.38E-78 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0431 c29f336979441c85bf58763fd2c196e3 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 9.7E-44 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0431 c29f336979441c85bf58763fd2c196e3 596 Gene3D G3DSA:3.90.700.10 250 353 2.1E-166 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0431 c29f336979441c85bf58763fd2c196e3 596 Gene3D G3DSA:3.50.50.60 13 419 2.1E-166 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0431 c29f336979441c85bf58763fd2c196e3 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 13 596 3.1E-242 T 15-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0431 c29f336979441c85bf58763fd2c196e3 596 PIRSF PIRSF000171 3 586 3.0E-39 T 15-10-2018 THII_0431 c29f336979441c85bf58763fd2c196e3 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 10 596 1.0E-288 T 15-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0431 c29f336979441c85bf58763fd2c196e3 596 Gene3D G3DSA:1.20.58.100 436 547 1.2E-37 T 15-10-2018 THII_0431 c29f336979441c85bf58763fd2c196e3 596 SUPERFAMILY SSF46977 454 596 1.44E-50 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0431 c29f336979441c85bf58763fd2c196e3 596 Pfam PF00890 FAD binding domain 13 408 6.2E-123 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0431 c29f336979441c85bf58763fd2c196e3 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 47 56 - T 15-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0261 f8809486a6a116638d47ce477d9f35ba 156 SUPERFAMILY SSF75217 1 154 4.4E-49 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases THII_0261 f8809486a6a116638d47ce477d9f35ba 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 7.9E-58 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 THII_0261 f8809486a6a116638d47ce477d9f35ba 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.134 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 THII_0261 f8809486a6a116638d47ce477d9f35ba 156 PIRSF PIRSF004505 1 155 1.2E-45 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 THII_0261 f8809486a6a116638d47ce477d9f35ba 156 Gene3D G3DSA:3.40.1280.10 1 156 5.4E-50 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THII_0261 f8809486a6a116638d47ce477d9f35ba 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.7E-49 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 THII_3621 c332fff383559616f82882b240338920 1029 SMART SM00304 723 787 15.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3621 c332fff383559616f82882b240338920 1029 SMART SM00304 590 642 5.9E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3621 c332fff383559616f82882b240338920 1029 Pfam PF00672 HAMP domain 591 639 4.5E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3621 c332fff383559616f82882b240338920 1029 Gene3D G3DSA:1.10.287.950 685 984 2.2E-82 T 15-10-2018 THII_3621 c332fff383559616f82882b240338920 1029 Gene3D G3DSA:1.10.8.500 589 642 1.4E-9 T 15-10-2018 THII_3621 c332fff383559616f82882b240338920 1029 Gene3D G3DSA:3.30.450.20 435 571 2.3E-6 T 15-10-2018 THII_3621 c332fff383559616f82882b240338920 1029 Gene3D G3DSA:3.30.450.20 215 354 6.1E-7 T 15-10-2018 THII_3621 c332fff383559616f82882b240338920 1029 SUPERFAMILY SSF158472 592 640 1.26E-9 T 15-10-2018 THII_3621 c332fff383559616f82882b240338920 1029 Pfam PF02743 Cache domain 83 338 6.2E-19 T 15-10-2018 IPR033479 Double Cache domain 1 THII_3621 c332fff383559616f82882b240338920 1029 SMART SM00283 735 982 3.2E-88 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_3621 c332fff383559616f82882b240338920 1029 SUPERFAMILY SSF58104 702 983 4.97E-70 T 15-10-2018 THII_3621 c332fff383559616f82882b240338920 1029 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 794 950 2.0E-51 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_0838 f73e3cbcc7910336b14f1d7096569f4c 168 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 14 119 3.8E-45 T 15-10-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 THII_0838 f73e3cbcc7910336b14f1d7096569f4c 168 Pfam PF05233 PHB accumulation regulatory domain 79 118 2.5E-13 T 15-10-2018 IPR007897 PHB accumulation regulatory THII_0838 f73e3cbcc7910336b14f1d7096569f4c 168 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 15 74 8.5E-30 T 15-10-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal THII_2945 afaf6850a3696636c6343ef3778b5b90 480 Pfam PF00361 Proton-conducting membrane transporter 125 419 7.1E-78 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2945 afaf6850a3696636c6343ef3778b5b90 480 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 5.4E-9 T 15-10-2018 THII_2945 afaf6850a3696636c6343ef3778b5b90 480 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 5.4E-9 T 15-10-2018 THII_2945 afaf6850a3696636c6343ef3778b5b90 480 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 413 432 5.4E-9 T 15-10-2018 THII_2945 afaf6850a3696636c6343ef3778b5b90 480 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 470 18.491 T 15-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 THII_2945 afaf6850a3696636c6343ef3778b5b90 480 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 10 470 4.4E-148 T 15-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 15-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 487 84.196 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 PIRSF PIRSF000130 1 488 1.4E-208 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 SUPERFAMILY SSF51412 2 478 2.09E-128 T 15-10-2018 THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 Gene3D G3DSA:3.20.20.70 1 487 2.0E-215 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 474 1.3E-165 T 15-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 455 3.1E-192 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 SMART SM01240 6 474 0.0 T 15-10-2018 THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 SUPERFAMILY SSF54631 93 202 2.02E-29 T 15-10-2018 THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 Pfam PF00571 CBS domain 94 138 3.6E-11 T 15-10-2018 IPR000644 CBS domain THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 Pfam PF00571 CBS domain 147 201 6.0E-7 T 15-10-2018 IPR000644 CBS domain THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 SMART SM00116 95 142 7.3E-13 T 15-10-2018 IPR000644 CBS domain THII_2314 a045e7df1dea94f5cb2d2cee508d0573 488 SMART SM00116 156 204 3.4E-9 T 15-10-2018 IPR000644 CBS domain THII_0435 94a264dae5e1a5996c72e72f2555bb9b 303 Gene3D G3DSA:2.70.98.10 2 302 5.2E-92 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 THII_0435 94a264dae5e1a5996c72e72f2555bb9b 303 PIRSF PIRSF016020 6 302 2.3E-65 T 15-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 THII_0435 94a264dae5e1a5996c72e72f2555bb9b 303 SUPERFAMILY SSF74650 24 297 3.14E-68 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 THII_0435 94a264dae5e1a5996c72e72f2555bb9b 303 Pfam PF01263 Aldose 1-epimerase 32 298 2.1E-49 T 15-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 THII_1473 f7061b8195d7167b2e6be87205d6cc94 317 Hamap MF_00206 Lipoyl synthase [lipA]. 1 317 149.262 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 THII_1473 f7061b8195d7167b2e6be87205d6cc94 317 TIGRFAM TIGR00510 lipA: lipoyl synthase 29 311 3.4E-131 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 THII_1473 f7061b8195d7167b2e6be87205d6cc94 317 PIRSF PIRSF005963 1 316 9.2E-135 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 THII_1473 f7061b8195d7167b2e6be87205d6cc94 317 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 28 70 2.2E-9 T 15-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 THII_1473 f7061b8195d7167b2e6be87205d6cc94 317 SMART SM00729 81 290 4.4E-12 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_1473 f7061b8195d7167b2e6be87205d6cc94 317 Pfam PF04055 Radical SAM superfamily 88 247 1.6E-12 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_1473 f7061b8195d7167b2e6be87205d6cc94 317 Gene3D G3DSA:3.20.20.70 78 287 1.7E-18 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_1473 f7061b8195d7167b2e6be87205d6cc94 317 SUPERFAMILY SSF102114 50 310 9.42E-64 T 15-10-2018 THII_3563 c9151e473d1d842268e56908a0237fc9 177 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 15-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 THII_3563 c9151e473d1d842268e56908a0237fc9 177 Pfam PF00782 Dual specificity phosphatase, catalytic domain 101 158 7.8E-7 T 15-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 THII_3563 c9151e473d1d842268e56908a0237fc9 177 Gene3D G3DSA:3.90.190.10 18 166 4.3E-12 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like THII_3563 c9151e473d1d842268e56908a0237fc9 177 SUPERFAMILY SSF52799 55 154 5.8E-12 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 Gene3D G3DSA:1.10.8.60 315 395 8.5E-25 T 15-10-2018 THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 Gene3D G3DSA:3.40.50.300 133 314 5.6E-61 T 15-10-2018 THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 Gene3D G3DSA:1.10.10.60 418 458 2.4E-8 T 15-10-2018 THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 SMART SM00448 4 115 3.1E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 Pfam PF00072 Response regulator receiver domain 7 114 3.9E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 SMART SM00382 163 306 2.3E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 Pfam PF00158 Sigma-54 interaction domain 144 309 1.2E-66 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 SUPERFAMILY SSF46689 413 462 1.4E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 SUPERFAMILY SSF52172 1 188 4.84E-42 T 15-10-2018 IPR011006 CheY-like superfamily THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 SUPERFAMILY SSF52540 143 385 1.62E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 Gene3D G3DSA:3.40.50.2300 2 132 1.2E-31 T 15-10-2018 THII_3872 feb5cfea8c5a5cb3150e708877b27bb8 468 Pfam PF02954 Bacterial regulatory protein, Fis family 422 460 4.9E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_0031 3ccbab9c587e03f7162c47a179f2e3bf 286 SUPERFAMILY SSF48179 178 284 9.86E-36 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 THII_0031 3ccbab9c587e03f7162c47a179f2e3bf 286 Gene3D G3DSA:1.10.3660.10 180 284 1.1E-37 T 15-10-2018 THII_0031 3ccbab9c587e03f7162c47a179f2e3bf 286 Gene3D G3DSA:3.40.50.720 3 179 1.3E-57 T 15-10-2018 THII_0031 3ccbab9c587e03f7162c47a179f2e3bf 286 Pfam PF02153 Prephenate dehydrogenase 18 274 4.7E-80 T 15-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 THII_0031 3ccbab9c587e03f7162c47a179f2e3bf 286 SUPERFAMILY SSF51735 5 172 2.43E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0194 83070abb22b98772501e83dee0f0250c 755 SUPERFAMILY SSF56003 118 750 1.22E-175 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 THII_0194 83070abb22b98772501e83dee0f0250c 755 Gene3D G3DSA:3.30.365.10 1 753 3.9E-252 T 15-10-2018 THII_0194 83070abb22b98772501e83dee0f0250c 755 SUPERFAMILY SSF54665 4 119 2.62E-32 T 15-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily THII_0194 83070abb22b98772501e83dee0f0250c 755 SMART SM01008 11 118 2.7E-33 T 15-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead THII_0194 83070abb22b98772501e83dee0f0250c 755 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 12 117 5.8E-25 T 15-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead THII_0194 83070abb22b98772501e83dee0f0250c 755 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 140 680 1.2E-177 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 THII_3587 c070ef3e815aaa2e7f72aef684e58027 319 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 319 68.893 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 THII_3587 c070ef3e815aaa2e7f72aef684e58027 319 Gene3D G3DSA:3.40.47.10 2 319 4.2E-128 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_3587 c070ef3e815aaa2e7f72aef684e58027 319 SUPERFAMILY SSF53901 3 319 3.94E-71 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_3587 c070ef3e815aaa2e7f72aef684e58027 319 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 7.0E-35 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 THII_3587 c070ef3e815aaa2e7f72aef684e58027 319 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 318 1.6E-128 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 THII_3587 c070ef3e815aaa2e7f72aef684e58027 319 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 319 4.7E-35 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 THII_3466 97456dfc5de26212e3eea0fab671f9b6 226 SUPERFAMILY SSF53335 6 224 2.11E-32 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3466 97456dfc5de26212e3eea0fab671f9b6 226 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 10 226 31.409 T 15-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 THII_3466 97456dfc5de26212e3eea0fab671f9b6 226 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 40 225 2.8E-53 T 15-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 THII_3466 97456dfc5de26212e3eea0fab671f9b6 226 Gene3D G3DSA:3.40.50.150 17 226 6.2E-67 T 15-10-2018 THII_3466 97456dfc5de26212e3eea0fab671f9b6 226 Pfam PF02390 Putative methyltransferase 52 221 1.4E-55 T 15-10-2018 THII_3431 85715fbb0ddfc9af9f8dbce273188d8f 343 SUPERFAMILY SSF52096 58 292 4.18E-45 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_3431 85715fbb0ddfc9af9f8dbce273188d8f 343 Pfam PF01343 Peptidase family S49 155 305 1.4E-36 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 THII_3431 85715fbb0ddfc9af9f8dbce273188d8f 343 Gene3D G3DSA:3.90.226.10 94 293 1.9E-66 T 15-10-2018 THII_3431 85715fbb0ddfc9af9f8dbce273188d8f 343 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 92 302 1.1E-49 T 15-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 THII_3431 85715fbb0ddfc9af9f8dbce273188d8f 343 Gene3D G3DSA:3.40.1750.20 194 262 1.9E-66 T 15-10-2018 THII_3278 f7a67f2e67e45de4d8546ef3659532c0 348 Pfam PF03462 PCRF domain 14 203 1.4E-57 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 THII_3278 f7a67f2e67e45de4d8546ef3659532c0 348 Gene3D G3DSA:3.30.160.20 209 304 4.4E-97 T 15-10-2018 THII_3278 f7a67f2e67e45de4d8546ef3659532c0 348 Pfam PF00472 RF-1 domain 211 320 4.5E-40 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 THII_3278 f7a67f2e67e45de4d8546ef3659532c0 348 SUPERFAMILY SSF75620 15 345 3.01E-130 T 15-10-2018 THII_3278 f7a67f2e67e45de4d8546ef3659532c0 348 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 5 346 2.4E-161 T 15-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 THII_3278 f7a67f2e67e45de4d8546ef3659532c0 348 Gene3D G3DSA:1.20.58.410 1 99 2.5E-25 T 15-10-2018 THII_3278 f7a67f2e67e45de4d8546ef3659532c0 348 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 THII_3278 f7a67f2e67e45de4d8546ef3659532c0 348 Gene3D G3DSA:3.30.70.1660 113 341 4.4E-97 T 15-10-2018 THII_3278 f7a67f2e67e45de4d8546ef3659532c0 348 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 348 38.04 T 15-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 THII_3278 f7a67f2e67e45de4d8546ef3659532c0 348 SMART SM00937 68 178 2.9E-56 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 THII_2917 8f9d1d5746ae500d5df5b975b7377f97 99 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.5E-38 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2917 8f9d1d5746ae500d5df5b975b7377f97 99 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.5E-38 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2917 8f9d1d5746ae500d5df5b975b7377f97 99 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.5E-38 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2917 8f9d1d5746ae500d5df5b975b7377f97 99 SUPERFAMILY SSF110324 2 82 1.4E-33 T 15-10-2018 THII_2917 8f9d1d5746ae500d5df5b975b7377f97 99 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 15-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_2917 8f9d1d5746ae500d5df5b975b7377f97 99 Gene3D G3DSA:2.40.50.1030 6 91 9.4E-29 T 15-10-2018 THII_2917 8f9d1d5746ae500d5df5b975b7377f97 99 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.088 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2917 8f9d1d5746ae500d5df5b975b7377f97 99 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 8.7E-40 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2917 8f9d1d5746ae500d5df5b975b7377f97 99 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 2.0E-13 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2917 8f9d1d5746ae500d5df5b975b7377f97 99 Pfam PF01016 Ribosomal L27 protein 2 82 1.4E-37 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 Gene3D G3DSA:3.40.50.880 986 1296 3.4E-132 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 840 922 5.9E-9 T 15-10-2018 IPR010918 PurM-like, C-terminal domain THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 440 594 8.0E-27 T 15-10-2018 IPR010918 PurM-like, C-terminal domain THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 SUPERFAMILY SSF52317 1036 1295 1.46E-93 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 SUPERFAMILY SSF56042 437 663 7.33E-54 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 SUPERFAMILY SSF56042 821 1031 1.94E-50 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 SUPERFAMILY SSF109736 165 230 2.75E-21 T 15-10-2018 THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 Gene3D G3DSA:1.10.8.750 163 223 1.2E-24 T 15-10-2018 THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 SMART SM01211 1039 1295 1.4E-145 T 15-10-2018 THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 Gene3D G3DSA:3.30.1330.10 623 814 1.2E-25 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 SUPERFAMILY SSF55326 638 820 1.02E-63 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 Gene3D G3DSA:3.30.1330.10 224 426 8.1E-44 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1296 20.818 T 15-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 Gene3D G3DSA:3.90.650.10 817 985 9.2E-29 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 SUPERFAMILY SSF55326 231 433 1.18E-60 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 SUPERFAMILY SSF82697 1 161 4.08E-37 T 15-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 Gene3D G3DSA:3.90.650.10 427 610 3.7E-60 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1295 0.0 T 15-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_3019 03330b1c1c6d0eb1dc72c45cbf12117c 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1295 1.2E-106 T 15-10-2018 THII_0726 78ff9ccd3c85cf524a19798ef4eb09f9 426 SUPERFAMILY SSF53383 2 424 2.48E-131 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_0726 78ff9ccd3c85cf524a19798ef4eb09f9 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 THII_0726 78ff9ccd3c85cf524a19798ef4eb09f9 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 425 6.2E-192 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 THII_0726 78ff9ccd3c85cf524a19798ef4eb09f9 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 103.827 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 THII_0726 78ff9ccd3c85cf524a19798ef4eb09f9 426 Pfam PF00202 Aminotransferase class-III 33 395 2.1E-81 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 THII_0726 78ff9ccd3c85cf524a19798ef4eb09f9 426 Gene3D G3DSA:3.40.640.10 69 317 1.1E-174 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_0726 78ff9ccd3c85cf524a19798ef4eb09f9 426 Gene3D G3DSA:3.90.1150.10 8 420 1.1E-174 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 317 452 4.0E-31 T 15-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 Gene3D G3DSA:1.10.390.10 319 471 6.4E-44 T 15-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 Gene3D G3DSA:3.10.450.40 74 162 1.4E-14 T 15-10-2018 THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 SUPERFAMILY SSF55486 167 466 3.3E-69 T 15-10-2018 THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 Gene3D G3DSA:3.10.170.10 165 318 3.9E-48 T 15-10-2018 THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 188 314 4.9E-26 T 15-10-2018 IPR013856 Peptidase M4 domain GO:0004222 THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 271 291 3.1E-20 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 305 321 3.1E-20 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 326 337 3.1E-20 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 393 409 3.1E-20 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 14 61 6.0E-9 T 15-10-2018 IPR011096 FTP domain THII_1040 975135c06a9b2a94a2169011c6d7b6e4 617 Gene3D G3DSA:3.10.450.490 15 72 5.0E-8 T 15-10-2018 THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Pfam PF05658 Head domain of trimeric autotransporter adhesin 345 370 9.5E-8 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Pfam PF05658 Head domain of trimeric autotransporter adhesin 331 356 4.3E-8 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Pfam PF05658 Head domain of trimeric autotransporter adhesin 251 272 5.1E-5 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Pfam PF05658 Head domain of trimeric autotransporter adhesin 317 341 2.3E-6 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Pfam PF05658 Head domain of trimeric autotransporter adhesin 359 384 2.6E-5 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Gene3D G3DSA:2.40.300.10 529 593 7.4E-12 T 15-10-2018 THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Gene3D G3DSA:2.40.300.10 689 756 3.5E-5 T 15-10-2018 THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Gene3D G3DSA:2.150.10.10 388 461 1.1E-11 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Gene3D G3DSA:2.150.10.10 330 387 1.0E-11 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Gene3D G3DSA:2.150.10.10 239 329 1.4E-17 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 516 602 1.9E-18 T 15-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 681 739 3.7E-11 T 15-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 SUPERFAMILY SSF101967 329 458 9.55E-20 T 15-10-2018 THII_1996 0053ad14de5f915aafc40b96c4dd84f9 767 SUPERFAMILY SSF101967 245 355 7.72E-19 T 15-10-2018 THII_2002 ffb281def409cb00a0efc4c1faacc1f0 105 Pfam PF01381 Helix-turn-helix 25 70 2.7E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2002 ffb281def409cb00a0efc4c1faacc1f0 105 SMART SM00530 17 73 1.0E-4 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2002 ffb281def409cb00a0efc4c1faacc1f0 105 Gene3D G3DSA:1.10.260.40 4 102 6.2E-34 T 15-10-2018 THII_2002 ffb281def409cb00a0efc4c1faacc1f0 105 SUPERFAMILY SSF47413 13 94 1.32E-24 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_2002 ffb281def409cb00a0efc4c1faacc1f0 105 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 9 88 2.7E-32 T 15-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 THII_0346 b94b5cc7b996b43bf90c76e54e00b2d3 226 SUPERFAMILY SSF52980 12 196 3.11E-28 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0346 b94b5cc7b996b43bf90c76e54e00b2d3 226 Gene3D G3DSA:3.90.1570.10 10 197 3.1E-12 T 15-10-2018 THII_0346 b94b5cc7b996b43bf90c76e54e00b2d3 226 Pfam PF05685 Putative restriction endonuclease 22 193 1.2E-28 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3384 69ac5946f85ac8f8c4a130585c7d4c20 419 SUPERFAMILY SSF51556 67 356 9.21E-22 T 15-10-2018 IPR032466 Metal-dependent hydrolase THII_3384 69ac5946f85ac8f8c4a130585c7d4c20 419 Pfam PF04909 Amidohydrolase 151 349 3.7E-10 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 THII_3384 69ac5946f85ac8f8c4a130585c7d4c20 419 Gene3D G3DSA:3.20.20.140 135 381 1.3E-25 T 15-10-2018 THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 1.6E-45 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 101 595 4.5E-241 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 SUPERFAMILY SSF52540 146 393 2.63E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 Gene3D G3DSA:1.10.8.60 325 398 2.2E-28 T 15-10-2018 THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 SMART SM00382 186 325 1.3E-25 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 Gene3D G3DSA:1.20.58.760 399 601 1.7E-74 T 15-10-2018 THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 Gene3D G3DSA:2.40.50.920 28 101 1.1E-11 T 15-10-2018 THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 Pfam PF01434 Peptidase family M41 384 594 1.6E-82 T 15-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 Gene3D G3DSA:3.40.50.300 138 324 1.1E-69 T 15-10-2018 THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 Pfam PF06480 FtsH Extracellular 8 85 1.6E-13 T 15-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 15-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 612 37.492 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 THII_3612 622182d713bc8c1dd1d6e5bfd2714614 643 SUPERFAMILY SSF140990 404 606 1.16E-77 T 15-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 THII_1118 a23c6b489889c0de6ef6aaae54de1cbb 760 Pfam PF00582 Universal stress protein family 633 759 2.0E-25 T 15-10-2018 IPR006016 UspA THII_1118 a23c6b489889c0de6ef6aaae54de1cbb 760 Pfam PF00582 Universal stress protein family 488 624 1.2E-22 T 15-10-2018 IPR006016 UspA THII_1118 a23c6b489889c0de6ef6aaae54de1cbb 760 Gene3D G3DSA:3.40.50.620 487 626 4.6E-28 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1118 a23c6b489889c0de6ef6aaae54de1cbb 760 Gene3D G3DSA:3.40.50.620 632 759 2.0E-30 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1118 a23c6b489889c0de6ef6aaae54de1cbb 760 Pfam PF01925 Sulfite exporter TauE/SafE 130 400 7.9E-34 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 THII_1118 a23c6b489889c0de6ef6aaae54de1cbb 760 SUPERFAMILY SSF52402 488 625 6.11E-28 T 15-10-2018 THII_1118 a23c6b489889c0de6ef6aaae54de1cbb 760 SUPERFAMILY SSF52402 634 759 5.86E-31 T 15-10-2018 THII_1118 a23c6b489889c0de6ef6aaae54de1cbb 760 PRINTS PR01438 Universal stress protein signature 488 506 2.3E-16 T 15-10-2018 IPR006015 Universal stress protein A THII_1118 a23c6b489889c0de6ef6aaae54de1cbb 760 PRINTS PR01438 Universal stress protein signature 719 731 2.3E-16 T 15-10-2018 IPR006015 Universal stress protein A THII_1118 a23c6b489889c0de6ef6aaae54de1cbb 760 PRINTS PR01438 Universal stress protein signature 737 759 2.3E-16 T 15-10-2018 IPR006015 Universal stress protein A THII_3349 49b4d8cf9075bae374d36dbfa794ebac 132 Gene3D G3DSA:2.60.120.380 24 131 6.6E-21 T 15-10-2018 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 SMART SM00387 486 597 3.9E-40 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0070 91cab0094c249d4b5c910d861607ee46 1054 SMART SM00388 373 441 2.3E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 SMART SM00044 760 961 2.1E-9 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 Gene3D G3DSA:1.10.287.130 366 443 3.4E-20 T 15-10-2018 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 798 973 7.6E-31 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 487 596 8.1E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0070 91cab0094c249d4b5c910d861607ee46 1054 Gene3D G3DSA:3.40.50.12740 643 789 3.5E-44 T 15-10-2018 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 SMART SM00304 313 365 3.6E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 SUPERFAMILY SSF47384 357 441 1.82E-19 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 SUPERFAMILY SSF55073 793 978 3.45E-54 T 15-10-2018 IPR029787 Nucleotide cyclase THII_0070 91cab0094c249d4b5c910d861607ee46 1054 SUPERFAMILY SSF55874 430 597 3.8E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0070 91cab0094c249d4b5c910d861607ee46 1054 Gene3D G3DSA:3.30.70.1230 790 987 2.4E-57 T 15-10-2018 IPR029787 Nucleotide cyclase THII_0070 91cab0094c249d4b5c910d861607ee46 1054 SUPERFAMILY SSF52172 639 766 3.27E-41 T 15-10-2018 IPR011006 CheY-like superfamily THII_0070 91cab0094c249d4b5c910d861607ee46 1054 SUPERFAMILY SSF158472 314 364 2.09E-7 T 15-10-2018 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 SMART SM00448 643 757 6.7E-45 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 536 8.7E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 594 8.7E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 8.7E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 550 8.7E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 Gene3D G3DSA:3.30.565.10 444 600 2.6E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0070 91cab0094c249d4b5c910d861607ee46 1054 Gene3D G3DSA:1.20.1480.50 276 365 5.7E-12 T 15-10-2018 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 Pfam PF00072 Response regulator receiver domain 645 758 2.8E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0070 91cab0094c249d4b5c910d861607ee46 1054 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 439 2.5E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2333 5da6e426f95fff9966afd93f0411f848 468 Pfam PF12801 4Fe-4S binding domain 90 129 5.6E-8 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2333 5da6e426f95fff9966afd93f0411f848 468 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 35 463 1.6E-160 T 15-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 THII_2333 5da6e426f95fff9966afd93f0411f848 468 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 348 465 5.7E-28 T 15-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain THII_2333 5da6e426f95fff9966afd93f0411f848 468 Gene3D G3DSA:2.60.40.10 350 466 3.4E-28 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2333 5da6e426f95fff9966afd93f0411f848 468 SUPERFAMILY SSF54862 99 323 6.63E-31 T 15-10-2018 THII_2333 5da6e426f95fff9966afd93f0411f848 468 Pfam PF13746 4Fe-4S dicluster domain 213 318 3.4E-44 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2333 5da6e426f95fff9966afd93f0411f848 468 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 266 277 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_1398 81e9eb9a7cd8acc7b3b4a24df03263e3 358 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 354 9.1E-137 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 THII_1398 81e9eb9a7cd8acc7b3b4a24df03263e3 358 SUPERFAMILY SSF102114 101 330 1.57E-14 T 15-10-2018 THII_1398 81e9eb9a7cd8acc7b3b4a24df03263e3 358 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 1 350 74.446 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 THII_1398 81e9eb9a7cd8acc7b3b4a24df03263e3 358 Gene3D G3DSA:1.10.150.530 1 62 6.9E-26 T 15-10-2018 THII_1398 81e9eb9a7cd8acc7b3b4a24df03263e3 358 PIRSF PIRSF006004 1 358 3.4E-147 T 15-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 THII_1398 81e9eb9a7cd8acc7b3b4a24df03263e3 358 Gene3D G3DSA:3.20.20.70 63 335 3.7E-107 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_1398 81e9eb9a7cd8acc7b3b4a24df03263e3 358 Pfam PF04055 Radical SAM superfamily 105 274 1.2E-15 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_2089 16a2c94b906d6dad89e3548bdc22d8a3 615 SUPERFAMILY SSF55961 18 151 2.16E-8 T 15-10-2018 THII_2089 16a2c94b906d6dad89e3548bdc22d8a3 615 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 440 580 3.6E-23 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_2089 16a2c94b906d6dad89e3548bdc22d8a3 615 SUPERFAMILY SSF55073 441 613 4.55E-41 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2089 16a2c94b906d6dad89e3548bdc22d8a3 615 Gene3D G3DSA:3.30.70.1230 406 614 1.2E-45 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2089 16a2c94b906d6dad89e3548bdc22d8a3 615 SMART SM00044 340 595 3.8E-10 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_2730 2a17b91dca3a28e932b646249850a21e 127 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 61 127 1.0E-29 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2730 2a17b91dca3a28e932b646249850a21e 127 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 54 5.1E-18 T 15-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2730 2a17b91dca3a28e932b646249850a21e 127 Gene3D G3DSA:3.30.1390.10 57 127 2.7E-30 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like THII_2730 2a17b91dca3a28e932b646249850a21e 127 Gene3D G3DSA:1.20.5.710 2 56 7.5E-20 T 15-10-2018 THII_2730 2a17b91dca3a28e932b646249850a21e 127 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 127 24.68 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2730 2a17b91dca3a28e932b646249850a21e 127 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 65 127 2.0E-19 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2730 2a17b91dca3a28e932b646249850a21e 127 SUPERFAMILY SSF54736 56 127 1.26E-24 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like THII_2730 2a17b91dca3a28e932b646249850a21e 127 SUPERFAMILY SSF48300 5 63 1.07E-15 T 15-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2730 2a17b91dca3a28e932b646249850a21e 127 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 127 5.3E-47 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1698 7dbe24e214feb12d22d254b6bb0cfc2f 291 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 209 2.0E-28 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 THII_1698 7dbe24e214feb12d22d254b6bb0cfc2f 291 SUPERFAMILY SSF51735 1 287 1.52E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1698 7dbe24e214feb12d22d254b6bb0cfc2f 291 Gene3D G3DSA:3.40.50.720 1 290 2.3E-44 T 15-10-2018 THII_1985 fc4313189edcf197c4388dc7e3b67f9d 360 Gene3D G3DSA:3.40.190.10 58 256 1.6E-21 T 15-10-2018 THII_1985 fc4313189edcf197c4388dc7e3b67f9d 360 Gene3D G3DSA:3.40.190.10 126 224 1.6E-21 T 15-10-2018 THII_1985 fc4313189edcf197c4388dc7e3b67f9d 360 Pfam PF13379 NMT1-like family 40 260 2.2E-10 T 15-10-2018 THII_1985 fc4313189edcf197c4388dc7e3b67f9d 360 Gene3D G3DSA:1.10.8.450 257 286 1.6E-21 T 15-10-2018 THII_1985 fc4313189edcf197c4388dc7e3b67f9d 360 SUPERFAMILY SSF53850 44 265 1.9E-25 T 15-10-2018 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 6 296 2.3E-166 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 160 175 1.3E-68 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 80 100 1.3E-68 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 111 135 1.3E-68 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 59 74 1.3E-68 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 137 157 1.3E-68 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 249 265 1.3E-68 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 7 287 8.9E-152 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 5 289 61.18 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 Gene3D G3DSA:3.30.930.10 1 212 7.3E-112 T 15-10-2018 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 SUPERFAMILY SSF55681 6 288 8.95E-135 T 15-10-2018 THII_2748 4e0db0a02b334143afd1c3017bb5047d 300 Gene3D G3DSA:1.20.58.180 213 294 5.6E-35 T 15-10-2018 THII_0972 47b81e5462bfc3b4677619108aac847d 342 SUPERFAMILY SSF53756 1 341 4.71E-84 T 15-10-2018 THII_0972 47b81e5462bfc3b4677619108aac847d 342 Gene3D G3DSA:3.40.50.2000 1 162 3.1E-59 T 15-10-2018 THII_0972 47b81e5462bfc3b4677619108aac847d 342 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 313 8.8E-68 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 THII_0972 47b81e5462bfc3b4677619108aac847d 342 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 339 5.4E-111 T 15-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 THII_0972 47b81e5462bfc3b4677619108aac847d 342 Gene3D G3DSA:3.40.50.2000 168 313 2.7E-42 T 15-10-2018 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 444 8.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 8.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 488 8.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 469 8.4E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 SMART SM00448 648 762 4.2E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 SMART SM00448 507 620 1.1E-4 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 SUPERFAMILY SSF52172 647 766 1.57E-36 T 15-10-2018 IPR011006 CheY-like superfamily THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 SUPERFAMILY SSF52172 505 623 4.55E-16 T 15-10-2018 IPR011006 CheY-like superfamily THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 Pfam PF00072 Response regulator receiver domain 650 762 5.6E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 Pfam PF00072 Response regulator receiver domain 509 592 1.0E-7 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 SMART SM00388 263 328 1.5E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 Gene3D G3DSA:3.30.565.10 327 494 5.8E-52 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 488 3.2E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 Gene3D G3DSA:1.10.287.130 226 326 3.1E-26 T 15-10-2018 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 Gene3D G3DSA:3.40.50.2300 642 767 2.0E-42 T 15-10-2018 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 SUPERFAMILY SSF47384 247 329 2.94E-19 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 328 9.5E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 Gene3D G3DSA:3.40.50.2300 505 629 2.0E-14 T 15-10-2018 THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 SMART SM00387 375 491 8.7E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2582 476ed37b439bb5f9da2e8a92086960c5 769 SUPERFAMILY SSF55874 317 487 4.32E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1811 51cc3fda006bcb4d030a7b87cac1b6c7 239 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 117 208 3.2E-20 T 15-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis THII_1811 51cc3fda006bcb4d030a7b87cac1b6c7 239 SUPERFAMILY SSF53146 105 220 1.83E-31 T 15-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THII_1811 51cc3fda006bcb4d030a7b87cac1b6c7 239 Pfam PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal 9 94 9.8E-15 T 15-10-2018 IPR031763 Dinitrogenase iron-molybdenum cofactor, N-terminal THII_1811 51cc3fda006bcb4d030a7b87cac1b6c7 239 Gene3D G3DSA:1.10.150.590 3 97 1.7E-13 T 15-10-2018 IPR038127 NafY, N-terminal domain superfamily THII_1811 51cc3fda006bcb4d030a7b87cac1b6c7 239 Gene3D G3DSA:3.30.420.130 104 222 1.8E-32 T 15-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THII_2637 7f923a3df4a3cc397ab696ba3591a738 159 Pfam PF02082 Transcriptional regulator 1 83 1.5E-28 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type THII_2637 7f923a3df4a3cc397ab696ba3591a738 159 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 2.6E-48 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type THII_2637 7f923a3df4a3cc397ab696ba3591a738 159 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 133 2.7E-65 T 15-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 THII_2637 7f923a3df4a3cc397ab696ba3591a738 159 Gene3D G3DSA:1.10.10.10 1 144 6.3E-54 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2637 7f923a3df4a3cc397ab696ba3591a738 159 SUPERFAMILY SSF46785 2 133 9.54E-37 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_2637 7f923a3df4a3cc397ab696ba3591a738 159 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 15-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site THII_0540 4f0d4a5f116aeb4ccfb6db691820ede1 121 Pfam PF00072 Response regulator receiver domain 4 115 7.5E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0540 4f0d4a5f116aeb4ccfb6db691820ede1 121 Gene3D G3DSA:3.40.50.12740 2 121 4.6E-46 T 15-10-2018 THII_0540 4f0d4a5f116aeb4ccfb6db691820ede1 121 SMART SM00448 2 115 8.3E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0540 4f0d4a5f116aeb4ccfb6db691820ede1 121 SUPERFAMILY SSF52172 1 120 6.97E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_1474 ee5568aa55faed7bdf0faebe58e0c28f 217 PIRSF PIRSF016262 5 214 1.3E-56 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 THII_1474 ee5568aa55faed7bdf0faebe58e0c28f 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 29 190 6.2E-62 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 THII_1474 ee5568aa55faed7bdf0faebe58e0c28f 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 77 130 4.0E-12 T 15-10-2018 THII_1474 ee5568aa55faed7bdf0faebe58e0c28f 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 73 88 - T 15-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 THII_1474 ee5568aa55faed7bdf0faebe58e0c28f 217 Gene3D G3DSA:3.30.930.10 2 205 1.6E-60 T 15-10-2018 THII_1474 ee5568aa55faed7bdf0faebe58e0c28f 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 61 161 5.6E-7 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 THII_1474 ee5568aa55faed7bdf0faebe58e0c28f 217 SUPERFAMILY SSF55681 6 207 7.21E-66 T 15-10-2018 THII_1474 ee5568aa55faed7bdf0faebe58e0c28f 217 Hamap MF_00013 Octanoyltransferase [lipB]. 7 208 36.17 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 SMART SM00220 17 270 2.0E-11 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 Gene3D G3DSA:1.10.510.10 91 282 2.3E-29 T 15-10-2018 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 SMART SM00065 1346 1553 1.5E-9 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 SMART SM00387 1693 1822 1.3E-34 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 SUPERFAMILY SSF55781 1346 1555 7.2E-20 T 15-10-2018 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1765 1775 8.2E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1747 1761 8.2E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1806 1819 8.2E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1782 1800 8.2E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 SUPERFAMILY SSF55874 1636 1820 5.24E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 Pfam PF00069 Protein kinase domain 22 257 2.2E-27 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 SMART SM00388 1579 1647 5.2E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1697 1820 2.7E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 Pfam PF01590 GAF domain 1365 1543 3.3E-8 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 SUPERFAMILY SSF47384 1567 1648 2.94E-18 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 SUPERFAMILY SSF56112 6 271 2.56E-43 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 Gene3D G3DSA:3.30.200.20 2 84 3.6E-6 T 15-10-2018 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 Pfam PF13191 AAA ATPase domain 298 489 2.7E-32 T 15-10-2018 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 Gene3D G3DSA:3.30.565.10 1650 1823 4.8E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1579 1646 7.1E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 SUPERFAMILY SSF52540 296 581 6.73E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2375 ebb830dc5bde8e05cf8b649e0fee4d96 1826 Gene3D G3DSA:1.10.287.130 1562 1649 1.4E-22 T 15-10-2018 THII_0126 a759a49855bbfee530f8e0e3d89939f2 123 Gene3D G3DSA:3.80.10.10 23 121 1.6E-7 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_0126 a759a49855bbfee530f8e0e3d89939f2 123 SMART SM00369 63 86 6.4E-5 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0126 a759a49855bbfee530f8e0e3d89939f2 123 SUPERFAMILY SSF52058 43 85 4.25E-6 T 15-10-2018 THII_3264 5d3041998eb6ce17c1ff56a32aa94e93 179 SUPERFAMILY SSF53163 16 166 9.02E-25 T 15-10-2018 IPR023430 Peptidase HybD-like domain superfamily THII_3264 5d3041998eb6ce17c1ff56a32aa94e93 179 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 18 155 8.3E-19 T 15-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 THII_3264 5d3041998eb6ce17c1ff56a32aa94e93 179 Gene3D G3DSA:3.40.50.1450 16 168 5.3E-20 T 15-10-2018 IPR023430 Peptidase HybD-like domain superfamily THII_0177 f61a7e1a24f1a3bc0b92134a2cfba007 410 Gene3D G3DSA:2.60.40.3500 16 127 3.6E-24 T 15-10-2018 THII_0177 f61a7e1a24f1a3bc0b92134a2cfba007 410 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 178 394 1.5E-47 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 THII_0177 f61a7e1a24f1a3bc0b92134a2cfba007 410 SUPERFAMILY SSF53187 176 398 3.14E-49 T 15-10-2018 THII_0177 f61a7e1a24f1a3bc0b92134a2cfba007 410 Pfam PF11741 AMIN domain 31 124 2.2E-16 T 15-10-2018 IPR021731 AMIN domain THII_0177 f61a7e1a24f1a3bc0b92134a2cfba007 410 SMART SM00646 238 394 1.1E-50 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 THII_0177 f61a7e1a24f1a3bc0b92134a2cfba007 410 Gene3D G3DSA:3.40.630.40 164 404 5.2E-75 T 15-10-2018 THII_1004 aa5ef7b01c69fa35c8e8f11209ee0a3e 467 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 23 350 6.1E-48 T 15-10-2018 IPR010263 Type VI secretion protein, VC_A0114 THII_1323 17bfe53f7258a82e05852560115a0014 194 SUPERFAMILY SSF82185 43 128 1.11E-10 T 15-10-2018 THII_1323 17bfe53f7258a82e05852560115a0014 194 SUPERFAMILY SSF82185 115 192 1.57E-17 T 15-10-2018 THII_1323 17bfe53f7258a82e05852560115a0014 194 Pfam PF02493 MORN repeat 66 88 3.6E-9 T 15-10-2018 IPR003409 MORN motif THII_1323 17bfe53f7258a82e05852560115a0014 194 Pfam PF02493 MORN repeat 160 180 2.3E-5 T 15-10-2018 IPR003409 MORN motif THII_1323 17bfe53f7258a82e05852560115a0014 194 Pfam PF02493 MORN repeat 137 159 7.8E-10 T 15-10-2018 IPR003409 MORN motif THII_1323 17bfe53f7258a82e05852560115a0014 194 Pfam PF02493 MORN repeat 45 58 2.4 T 15-10-2018 IPR003409 MORN motif THII_1323 17bfe53f7258a82e05852560115a0014 194 Pfam PF02493 MORN repeat 116 132 21.0 T 15-10-2018 IPR003409 MORN motif THII_1323 17bfe53f7258a82e05852560115a0014 194 SMART SM00698 158 179 1.5E-4 T 15-10-2018 IPR003409 MORN motif THII_1323 17bfe53f7258a82e05852560115a0014 194 SMART SM00698 135 156 9.4E-8 T 15-10-2018 IPR003409 MORN motif THII_1323 17bfe53f7258a82e05852560115a0014 194 SMART SM00698 64 85 3.0E-7 T 15-10-2018 IPR003409 MORN motif THII_1323 17bfe53f7258a82e05852560115a0014 194 Gene3D G3DSA:2.20.110.10 38 105 8.7E-8 T 15-10-2018 THII_1323 17bfe53f7258a82e05852560115a0014 194 Gene3D G3DSA:2.20.110.10 106 193 1.7E-10 T 15-10-2018 THII_3575 fa48a10a162cb48e072886d3c4fa72d6 428 Gene3D G3DSA:3.40.50.300 10 349 3.7E-38 T 15-10-2018 THII_3575 fa48a10a162cb48e072886d3c4fa72d6 428 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 33 330 6.7E-30 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_3575 fa48a10a162cb48e072886d3c4fa72d6 428 SMART SM00382 30 351 3.7E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3575 fa48a10a162cb48e072886d3c4fa72d6 428 SUPERFAMILY SSF52540 11 347 2.2E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3571 33c1c879030d4554df103eccd8126b78 1409 SUPERFAMILY SSF55073 40 236 2.83E-22 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3571 33c1c879030d4554df103eccd8126b78 1409 Gene3D G3DSA:3.30.70.1230 36 236 2.3E-38 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3571 33c1c879030d4554df103eccd8126b78 1409 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 44 226 1.7E-7 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_3571 33c1c879030d4554df103eccd8126b78 1409 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 281 445 4.1E-12 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_3571 33c1c879030d4554df103eccd8126b78 1409 SMART SM00044 250 439 6.8E-4 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_3571 33c1c879030d4554df103eccd8126b78 1409 SUPERFAMILY SSF48452 1105 1282 6.03E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3571 33c1c879030d4554df103eccd8126b78 1409 Gene3D G3DSA:3.40.50.300 455 650 3.8E-8 T 15-10-2018 THII_3571 33c1c879030d4554df103eccd8126b78 1409 Gene3D G3DSA:1.25.40.10 1074 1373 1.7E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3571 33c1c879030d4554df103eccd8126b78 1409 SUPERFAMILY SSF55073 281 451 8.32E-27 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3571 33c1c879030d4554df103eccd8126b78 1409 SUPERFAMILY SSF52540 460 727 2.72E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3571 33c1c879030d4554df103eccd8126b78 1409 Pfam PF13191 AAA ATPase domain 464 643 2.2E-19 T 15-10-2018 THII_3571 33c1c879030d4554df103eccd8126b78 1409 Gene3D G3DSA:3.30.70.1230 278 454 2.4E-39 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3838 9e89e22add2142a45fa825729ed14a33 167 PIRSF PIRSF004749 1 167 1.0E-50 T 15-10-2018 IPR023635 Peptide deformylase THII_3838 9e89e22add2142a45fa825729ed14a33 167 Pfam PF01327 Polypeptide deformylase 4 155 7.0E-46 T 15-10-2018 IPR023635 Peptide deformylase THII_3838 9e89e22add2142a45fa825729ed14a33 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 154 7.9E-42 T 15-10-2018 IPR023635 Peptide deformylase THII_3838 9e89e22add2142a45fa825729ed14a33 167 PRINTS PR01576 Peptide deformylase signature 125 154 2.3E-26 T 15-10-2018 IPR023635 Peptide deformylase THII_3838 9e89e22add2142a45fa825729ed14a33 167 PRINTS PR01576 Peptide deformylase signature 106 124 2.3E-26 T 15-10-2018 IPR023635 Peptide deformylase THII_3838 9e89e22add2142a45fa825729ed14a33 167 PRINTS PR01576 Peptide deformylase signature 94 105 2.3E-26 T 15-10-2018 IPR023635 Peptide deformylase THII_3838 9e89e22add2142a45fa825729ed14a33 167 PRINTS PR01576 Peptide deformylase signature 34 63 2.3E-26 T 15-10-2018 IPR023635 Peptide deformylase THII_3838 9e89e22add2142a45fa825729ed14a33 167 SUPERFAMILY SSF56420 2 165 1.57E-51 T 15-10-2018 IPR036821 Peptide deformylase superfamily THII_3838 9e89e22add2142a45fa825729ed14a33 167 Gene3D G3DSA:3.90.45.10 1 167 1.4E-51 T 15-10-2018 IPR036821 Peptide deformylase superfamily THII_3838 9e89e22add2142a45fa825729ed14a33 167 Hamap MF_00163 Peptide deformylase [def]. 2 167 26.716 T 15-10-2018 IPR023635 Peptide deformylase THII_0604 12ebc38ff7e00255ed28024b6ba5a06b 106 SUPERFAMILY SSF103481 4 104 8.5E-20 T 15-10-2018 THII_0604 12ebc38ff7e00255ed28024b6ba5a06b 106 Gene3D G3DSA:1.10.3730.20 1 106 2.3E-35 T 15-10-2018 THII_0604 12ebc38ff7e00255ed28024b6ba5a06b 106 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.3E-28 T 15-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 Gene3D G3DSA:3.30.54.20 130 186 3.0E-65 T 15-10-2018 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 SMART SM00863 169 218 4.5E-26 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 Gene3D G3DSA:3.30.980.10 69 221 3.0E-65 T 15-10-2018 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 SUPERFAMILY SSF52954 528 633 2.57E-31 T 15-10-2018 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.602 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 Gene3D G3DSA:3.10.20.30 3 63 2.1E-21 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 2.1E-16 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 SUPERFAMILY SSF55186 64 240 7.46E-67 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 1.1E-224 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 Gene3D G3DSA:3.30.930.10 222 530 2.5E-127 T 15-10-2018 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 528 1.1E-43 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 Gene3D G3DSA:3.40.50.800 531 634 1.7E-30 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 SUPERFAMILY SSF55681 242 525 1.77E-100 T 15-10-2018 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 SUPERFAMILY SSF81271 3 61 4.58E-14 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 1.2E-52 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 1.2E-52 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 1.2E-52 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 1.2E-52 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 1.2E-52 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 Pfam PF02824 TGS domain 4 61 5.7E-8 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 THII_2371 b86746cc6bc21b35f4a5699d217bccb9 637 Pfam PF03129 Anticodon binding domain 540 628 1.5E-20 T 15-10-2018 IPR004154 Anticodon-binding THII_0102 705ef52ef96274c55dcd2dc88f15ab65 462 PIRSF PIRSF000167 4 461 2.7E-166 T 15-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 THII_0102 705ef52ef96274c55dcd2dc88f15ab65 462 Gene3D G3DSA:1.10.10.920 370 462 4.2E-33 T 15-10-2018 THII_0102 705ef52ef96274c55dcd2dc88f15ab65 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 7 462 7.5E-188 T 15-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 THII_0102 705ef52ef96274c55dcd2dc88f15ab65 462 Pfam PF04055 Radical SAM superfamily 60 234 2.4E-15 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_0102 705ef52ef96274c55dcd2dc88f15ab65 462 SUPERFAMILY SSF102114 5 450 2.49E-132 T 15-10-2018 THII_0102 705ef52ef96274c55dcd2dc88f15ab65 462 Gene3D G3DSA:3.80.30.20 3 369 4.3E-121 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe THII_0102 705ef52ef96274c55dcd2dc88f15ab65 462 Pfam PF06969 HemN C-terminal domain 369 437 1.2E-8 T 15-10-2018 IPR010723 HemN, C-terminal THII_0102 705ef52ef96274c55dcd2dc88f15ab65 462 SMART SM00729 55 278 5.4E-45 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_3549 c0bed6f4aa2d090934b44d1e9ea2fa19 350 Gene3D G3DSA:2.40.160.10 148 350 4.2E-7 T 15-10-2018 IPR023614 Porin domain superfamily THII_3549 c0bed6f4aa2d090934b44d1e9ea2fa19 350 SUPERFAMILY SSF56935 35 350 2.02E-13 T 15-10-2018 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 327 4.8E-132 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 SUPERFAMILY SSF52490 14 209 7.59E-70 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 SUPERFAMILY SSF55307 205 319 1.81E-39 T 15-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 SMART SM00864 14 206 3.2E-115 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 Gene3D G3DSA:3.40.50.1440 5 221 1.0E-79 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 15-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 Gene3D G3DSA:3.30.1330.20 222 333 1.4E-32 T 15-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 173 1.3E-38 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 375 37.729 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 Pfam PF12327 FtsZ family, C-terminal domain 223 317 2.8E-35 T 15-10-2018 IPR024757 Cell division protein FtsZ, C-terminal THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 ProSitePatterns PS01135 FtsZ protein signature 2. 98 119 - T 15-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 PRINTS PR00423 Cell division protein FtsZ signature 127 148 1.4E-49 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 PRINTS PR00423 Cell division protein FtsZ signature 213 234 1.4E-49 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 PRINTS PR00423 Cell division protein FtsZ signature 190 212 1.4E-49 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 PRINTS PR00423 Cell division protein FtsZ signature 99 119 1.4E-49 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 THII_2538 44059d8d5d3e6459ab99ce0544c60237 389 SMART SM00865 208 326 4.9E-52 T 15-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 THII_0553 65c3baa8531f26d173eaa238b08de391 162 Pfam PF01584 CheW-like domain 11 145 1.8E-31 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_0553 65c3baa8531f26d173eaa238b08de391 162 Gene3D G3DSA:2.30.30.40 13 137 1.2E-35 T 15-10-2018 THII_0553 65c3baa8531f26d173eaa238b08de391 162 SMART SM00260 6 143 4.9E-32 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_0553 65c3baa8531f26d173eaa238b08de391 162 SUPERFAMILY SSF50341 10 146 1.7E-33 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_0553 65c3baa8531f26d173eaa238b08de391 162 Gene3D G3DSA:2.40.50.180 29 138 1.2E-35 T 15-10-2018 THII_0347 23cfd8eb9797f5fe5590cbb9cf897881 1119 Pfam PF00082 Subtilase family 180 432 3.8E-32 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 THII_0347 23cfd8eb9797f5fe5590cbb9cf897881 1119 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 394 404 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site THII_0347 23cfd8eb9797f5fe5590cbb9cf897881 1119 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 237 247 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site THII_0347 23cfd8eb9797f5fe5590cbb9cf897881 1119 Gene3D G3DSA:3.40.50.200 152 448 5.8E-67 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_0347 23cfd8eb9797f5fe5590cbb9cf897881 1119 SUPERFAMILY SSF52743 165 432 3.4E-60 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_0347 23cfd8eb9797f5fe5590cbb9cf897881 1119 PRINTS PR00723 Subtilisin serine protease family (S8) signature 393 409 7.4E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_0347 23cfd8eb9797f5fe5590cbb9cf897881 1119 PRINTS PR00723 Subtilisin serine protease family (S8) signature 233 246 7.4E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_0347 23cfd8eb9797f5fe5590cbb9cf897881 1119 PRINTS PR00723 Subtilisin serine protease family (S8) signature 180 199 7.4E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_0347 23cfd8eb9797f5fe5590cbb9cf897881 1119 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 185 196 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 258 272 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 PRINTS PR00320 G protein beta WD-40 repeat signature 216 230 1.4E-10 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 PRINTS PR00320 G protein beta WD-40 repeat signature 258 272 1.4E-10 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 PRINTS PR00320 G protein beta WD-40 repeat signature 425 439 1.4E-10 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 Pfam PF00400 WD domain, G-beta repeat 233 271 7.2E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 Pfam PF00400 WD domain, G-beta repeat 360 395 7.9E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 Pfam PF00400 WD domain, G-beta repeat 317 354 3.6E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 Pfam PF00400 WD domain, G-beta repeat 277 311 4.2E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 Pfam PF00400 WD domain, G-beta repeat 193 229 3.5E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 Pfam PF00400 WD domain, G-beta repeat 443 479 4.1E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 Pfam PF00400 WD domain, G-beta repeat 400 437 1.6E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 Gene3D G3DSA:2.130.10.10 181 286 5.0E-39 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 425 439 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 216 230 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 Gene3D G3DSA:2.130.10.10 287 366 8.4E-30 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 Gene3D G3DSA:2.130.10.10 367 482 3.6E-44 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 383 397 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 SMART SM00320 274 312 4.6E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 SMART SM00320 190 229 1.9E-13 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 SMART SM00320 441 480 6.1E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 SMART SM00320 315 354 4.7E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 SMART SM00320 232 271 1.0E-12 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 SMART SM00320 357 396 6.1E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 SMART SM00320 399 438 1.2E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 SUPERFAMILY SSF50978 186 479 1.19E-107 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_1058 20ea24d146f6371b688b5eb7b03703a5 482 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 299 313 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SUPERFAMILY SSF47226 1090 1193 2.88E-21 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SUPERFAMILY SSF55874 306 476 1.13E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Gene3D G3DSA:3.30.565.10 316 480 5.7E-53 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SMART SM00387 364 480 8.0E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SMART SM00448 644 760 7.6E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SMART SM00448 1262 1375 3.3E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SMART SM00448 498 614 4.2E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SMART SM00073 1097 1190 0.024 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SMART SM00073 966 1063 9.9E-12 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SMART SM00073 827 921 5.4E-4 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Gene3D G3DSA:3.40.50.2300 633 762 2.9E-39 T 15-10-2018 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Gene3D G3DSA:3.40.50.2300 481 618 3.5E-26 T 15-10-2018 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Pfam PF17152 Periplasmic sensor domain 20 113 9.5E-9 T 15-10-2018 IPR033417 Periplasmic sensor domain CHASE8 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Gene3D G3DSA:3.30.70.1230 1422 1615 8.3E-54 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SMART SM00044 1388 1594 1.1E-12 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SUPERFAMILY SSF55073 1427 1612 6.44E-51 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Gene3D G3DSA:3.40.50.2300 1253 1397 5.8E-39 T 15-10-2018 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Gene3D G3DSA:1.10.287.130 195 315 4.3E-28 T 15-10-2018 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SUPERFAMILY SSF47226 815 929 2.62E-23 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 5.9E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 477 5.9E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 5.9E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 5.9E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 1429 1608 7.0E-30 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SUPERFAMILY SSF47384 235 318 2.94E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SUPERFAMILY SSF52172 642 762 9.25E-37 T 15-10-2018 IPR011006 CheY-like superfamily THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 317 3.5E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SUPERFAMILY SSF52172 1254 1392 2.13E-41 T 15-10-2018 IPR011006 CheY-like superfamily THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SUPERFAMILY SSF52172 495 618 5.83E-26 T 15-10-2018 IPR011006 CheY-like superfamily THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SUPERFAMILY SSF47226 950 1063 2.49E-26 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Gene3D G3DSA:1.20.120.160 808 922 2.1E-22 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 477 1.2E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Pfam PF00072 Response regulator receiver domain 646 760 8.4E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Pfam PF00072 Response regulator receiver domain 500 611 7.9E-15 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Pfam PF00072 Response regulator receiver domain 1264 1376 8.6E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Gene3D G3DSA:1.20.120.160 953 1069 2.7E-24 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Pfam PF01627 Hpt domain 836 918 2.8E-11 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Pfam PF01627 Hpt domain 1106 1186 3.4E-11 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Pfam PF01627 Hpt domain 975 1057 5.1E-14 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 Gene3D G3DSA:1.20.120.160 1076 1195 2.1E-21 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_2168 0b11605cbfc78a7c5b7f1894162efd05 1615 SMART SM00388 252 317 1.7E-26 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0457 6c37e3aa1727f666cc755cded2e83aec 129 Gene3D G3DSA:3.40.50.1010 1 126 3.2E-9 T 15-10-2018 THII_0457 6c37e3aa1727f666cc755cded2e83aec 129 Pfam PF01850 PIN domain 5 123 1.1E-12 T 15-10-2018 IPR002716 PIN domain THII_0457 6c37e3aa1727f666cc755cded2e83aec 129 SUPERFAMILY SSF88723 1 129 3.36E-19 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 617 693 9.9E-16 T 15-10-2018 IPR011709 Domain of unknown function DUF1605 THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 14 1307 0.0 T 15-10-2018 IPR010222 RNA helicase HrpA GO:0004004 THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 Pfam PF04408 Helicase associated domain (HA2) 467 551 1.0E-17 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 SMART SM00490 304 404 4.8E-12 T 15-10-2018 IPR001650 Helicase, C-terminal THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 SMART SM00487 73 258 4.9E-26 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 SUPERFAMILY SSF52540 73 679 3.52E-104 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 Gene3D G3DSA:3.40.50.300 26 251 9.0E-76 T 15-10-2018 THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 SMART SM00382 91 386 9.8E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 Gene3D G3DSA:3.40.50.300 252 420 1.8E-53 T 15-10-2018 THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 SMART SM00847 464 554 9.5E-34 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 Gene3D G3DSA:1.20.120.1080 449 550 2.4E-19 T 15-10-2018 THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 Pfam PF11898 Domain of unknown function (DUF3418) 709 1307 1.3E-202 T 15-10-2018 IPR024590 RNA helicase HrpA, C-terminal THII_0407 f905bf6c7c77e9bb88dc73cfa1bf05eb 1313 Pfam PF00271 Helicase conserved C-terminal domain 283 403 1.5E-11 T 15-10-2018 IPR001650 Helicase, C-terminal THII_3319 2887756b63347a8a97c3a2a77685ecc7 239 SUPERFAMILY SSF109755 13 232 8.79E-67 T 15-10-2018 THII_3319 2887756b63347a8a97c3a2a77685ecc7 239 Gene3D G3DSA:1.20.58.220 2 121 8.3E-40 T 15-10-2018 IPR038078 PhoU-like domain superfamily THII_3319 2887756b63347a8a97c3a2a77685ecc7 239 PIRSF PIRSF003107 8 228 8.0E-63 T 15-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 THII_3319 2887756b63347a8a97c3a2a77685ecc7 239 Gene3D G3DSA:1.20.58.220 122 237 2.2E-30 T 15-10-2018 IPR038078 PhoU-like domain superfamily THII_3319 2887756b63347a8a97c3a2a77685ecc7 239 Pfam PF01895 PhoU domain 27 113 3.3E-19 T 15-10-2018 IPR026022 PhoU domain THII_3319 2887756b63347a8a97c3a2a77685ecc7 239 Pfam PF01895 PhoU domain 130 213 2.5E-15 T 15-10-2018 IPR026022 PhoU domain THII_3319 2887756b63347a8a97c3a2a77685ecc7 239 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 223 1.1E-67 T 15-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 THII_3128 52f6d04b55111feae17a689ce6346a2b 422 Gene3D G3DSA:3.60.15.10 2 252 2.0E-84 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_3128 52f6d04b55111feae17a689ce6346a2b 422 Gene3D G3DSA:3.40.50.360 257 412 5.0E-42 T 15-10-2018 IPR029039 Flavoprotein-like superfamily THII_3128 52f6d04b55111feae17a689ce6346a2b 422 Pfam PF00258 Flavodoxin 260 389 2.6E-10 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 THII_3128 52f6d04b55111feae17a689ce6346a2b 422 PIRSF PIRSF005243 1 405 4.4E-126 T 15-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 THII_3128 52f6d04b55111feae17a689ce6346a2b 422 SUPERFAMILY SSF56281 6 280 2.1E-46 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_3128 52f6d04b55111feae17a689ce6346a2b 422 SUPERFAMILY SSF52218 255 397 1.7E-35 T 15-10-2018 IPR029039 Flavoprotein-like superfamily THII_3128 52f6d04b55111feae17a689ce6346a2b 422 Pfam PF00753 Metallo-beta-lactamase superfamily 37 171 6.7E-9 T 15-10-2018 IPR001279 Metallo-beta-lactamase THII_3128 52f6d04b55111feae17a689ce6346a2b 422 SMART SM00849 37 226 7.0E-31 T 15-10-2018 IPR001279 Metallo-beta-lactamase THII_3128 52f6d04b55111feae17a689ce6346a2b 422 ProSitePatterns PS00201 Flavodoxin signature. 260 276 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 THII_1296 be4a09ff72f20542b9ea82d5d694240c 503 PIRSF PIRSF000485 1 481 1.6E-163 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 THII_1296 be4a09ff72f20542b9ea82d5d694240c 503 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 44.688 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 THII_1296 be4a09ff72f20542b9ea82d5d694240c 503 Gene3D G3DSA:3.40.50.2020 277 441 5.5E-151 T 15-10-2018 THII_1296 be4a09ff72f20542b9ea82d5d694240c 503 Gene3D G3DSA:3.60.20.10 2 412 5.5E-151 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_1296 be4a09ff72f20542b9ea82d5d694240c 503 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 2.0E-157 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 THII_1296 be4a09ff72f20542b9ea82d5d694240c 503 SUPERFAMILY SSF53271 250 483 1.12E-72 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like THII_1296 be4a09ff72f20542b9ea82d5d694240c 503 Pfam PF00156 Phosphoribosyl transferase domain 278 394 4.3E-8 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 THII_1296 be4a09ff72f20542b9ea82d5d694240c 503 Pfam PF13522 Glutamine amidotransferase domain 64 208 4.5E-15 T 15-10-2018 THII_1296 be4a09ff72f20542b9ea82d5d694240c 503 SUPERFAMILY SSF56235 2 257 1.97E-71 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_2535 1e8115dc63407091a10a8b88264db020 304 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 301 7.1E-101 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2535 1e8115dc63407091a10a8b88264db020 304 SUPERFAMILY SSF52440 7 99 3.55E-29 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily THII_2535 1e8115dc63407091a10a8b88264db020 304 SUPERFAMILY SSF56059 100 298 6.11E-58 T 15-10-2018 THII_2535 1e8115dc63407091a10a8b88264db020 304 Gene3D G3DSA:3.30.1490.20 114 179 7.8E-73 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 THII_2535 1e8115dc63407091a10a8b88264db020 304 Gene3D G3DSA:3.30.470.20 88 298 7.8E-73 T 15-10-2018 THII_2535 1e8115dc63407091a10a8b88264db020 304 Pfam PF01820 D-ala D-ala ligase N-terminus 7 89 3.0E-18 T 15-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2535 1e8115dc63407091a10a8b88264db020 304 Gene3D G3DSA:3.40.50.20 1 87 1.2E-30 T 15-10-2018 THII_2535 1e8115dc63407091a10a8b88264db020 304 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 6 302 34.342 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2535 1e8115dc63407091a10a8b88264db020 304 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 244 272 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2535 1e8115dc63407091a10a8b88264db020 304 Pfam PF07478 D-ala D-ala ligase C-terminus 108 298 1.0E-55 T 15-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2535 1e8115dc63407091a10a8b88264db020 304 PIRSF PIRSF039102 5 60 4.8E-9 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2535 1e8115dc63407091a10a8b88264db020 304 PIRSF PIRSF039102 48 304 2.0E-82 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2535 1e8115dc63407091a10a8b88264db020 304 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_3527 b6809abdb00104ee0f8408810074672f 177 Gene3D G3DSA:2.70.40.10 1 148 4.7E-45 T 15-10-2018 IPR036157 dUTPase-like superfamily THII_3527 b6809abdb00104ee0f8408810074672f 177 Pfam PF00692 dUTPase 68 173 2.2E-12 T 15-10-2018 IPR029054 dUTPase-like THII_3527 b6809abdb00104ee0f8408810074672f 177 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 7 176 5.2E-48 T 15-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 THII_3527 b6809abdb00104ee0f8408810074672f 177 Hamap MF_00146 dCTP deaminase [dcd]. 1 177 26.008 T 15-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 THII_3527 b6809abdb00104ee0f8408810074672f 177 SUPERFAMILY SSF51283 7 176 4.32E-48 T 15-10-2018 IPR036157 dUTPase-like superfamily THII_2165 40b0b2cac4dbb86f77eb4a139a817ca7 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 25.282 T 15-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 THII_2165 40b0b2cac4dbb86f77eb4a139a817ca7 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 190 2.3E-60 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_2165 40b0b2cac4dbb86f77eb4a139a817ca7 192 PIRSF PIRSF006102 1 192 2.4E-60 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_2165 40b0b2cac4dbb86f77eb4a139a817ca7 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.5E-83 T 15-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 THII_2342 5e4528a0923412eb693d16829498817a 205 Gene3D G3DSA:3.20.20.70 4 205 1.7E-63 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2342 5e4528a0923412eb693d16829498817a 205 SUPERFAMILY SSF51391 4 204 3.79E-61 T 15-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 THII_2342 5e4528a0923412eb693d16829498817a 205 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 7 200 6.1E-63 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 THII_2342 5e4528a0923412eb693d16829498817a 205 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 205 25.443 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 THII_2342 5e4528a0923412eb693d16829498817a 205 Pfam PF02581 Thiamine monophosphate synthase 7 187 1.1E-60 T 15-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 THII_1317 4bf89a0d4f92d4f18bd039273914c5d0 347 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 345 39.783 T 15-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 THII_1317 4bf89a0d4f92d4f18bd039273914c5d0 347 SUPERFAMILY SSF100950 10 341 2.28E-115 T 15-10-2018 IPR037171 NagB/RpiA transferase-like THII_1317 4bf89a0d4f92d4f18bd039273914c5d0 347 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 11 335 1.1E-139 T 15-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 THII_1317 4bf89a0d4f92d4f18bd039273914c5d0 347 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 37 334 3.4E-114 T 15-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 THII_1317 4bf89a0d4f92d4f18bd039273914c5d0 347 Pfam PF01008 Initiation factor 2 subunit family 50 334 7.4E-77 T 15-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 THII_1317 4bf89a0d4f92d4f18bd039273914c5d0 347 Gene3D G3DSA:1.20.120.420 7 152 4.6E-41 T 15-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 THII_1317 4bf89a0d4f92d4f18bd039273914c5d0 347 Gene3D G3DSA:3.40.50.10470 153 346 6.5E-67 T 15-10-2018 THII_3639 5ba3d0cd6a209a1370d53be94895d407 522 Gene3D G3DSA:2.70.98.10 42 413 1.0E-161 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 THII_3639 5ba3d0cd6a209a1370d53be94895d407 522 PIRSF PIRSF006281 13 522 7.0E-188 T 15-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD THII_3639 5ba3d0cd6a209a1370d53be94895d407 522 Gene3D G3DSA:2.60.40.10 416 522 2.4E-26 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3639 5ba3d0cd6a209a1370d53be94895d407 522 SUPERFAMILY SSF74650 43 409 9.1E-147 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 THII_3639 5ba3d0cd6a209a1370d53be94895d407 522 SUPERFAMILY SSF81296 416 520 2.24E-22 T 15-10-2018 IPR014756 Immunoglobulin E-set THII_3639 5ba3d0cd6a209a1370d53be94895d407 522 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 43 519 4.3E-189 T 15-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 THII_3566 440fa466f39fc4d500bcaf06e2a34d44 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 135 159 1.0E-9 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 THII_3566 440fa466f39fc4d500bcaf06e2a34d44 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 1.0E-9 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 THII_3566 440fa466f39fc4d500bcaf06e2a34d44 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 1.0E-9 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 THII_3566 440fa466f39fc4d500bcaf06e2a34d44 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 1.0E-9 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 THII_3566 440fa466f39fc4d500bcaf06e2a34d44 253 Pfam PF01061 ABC-2 type transporter 6 215 1.3E-34 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 THII_3566 440fa466f39fc4d500bcaf06e2a34d44 253 PIRSF PIRSF006648 5 250 1.6E-23 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 THII_1516 451049e145ffcb4c657d97cb8d20788c 91 Pfam PF05899 Protein of unknown function (DUF861) 19 88 7.3E-28 T 15-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 THII_1516 451049e145ffcb4c657d97cb8d20788c 91 Gene3D G3DSA:2.60.120.10 1 90 1.1E-32 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_1516 451049e145ffcb4c657d97cb8d20788c 91 SUPERFAMILY SSF51182 14 88 1.67E-17 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily THII_3798 797289821f7a7dfa95953d187bb3502e 432 Pfam PF01494 FAD binding domain 5 319 1.3E-7 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 THII_3798 797289821f7a7dfa95953d187bb3502e 432 SUPERFAMILY SSF54373 182 284 4.71E-23 T 15-10-2018 THII_3798 797289821f7a7dfa95953d187bb3502e 432 Gene3D G3DSA:3.50.50.60 2 421 9.5E-61 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3798 797289821f7a7dfa95953d187bb3502e 432 SUPERFAMILY SSF51905 1 374 9.35E-44 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3798 797289821f7a7dfa95953d187bb3502e 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.3E-5 T 15-10-2018 THII_3798 797289821f7a7dfa95953d187bb3502e 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 1.3E-5 T 15-10-2018 THII_3871 8f9643b137754bee5813330c3e8046c8 1498 Pfam PF13502 AsmA-like C-terminal region 1237 1478 2.1E-39 T 15-10-2018 IPR032712 AsmA-like, C-terminal THII_3871 8f9643b137754bee5813330c3e8046c8 1498 Pfam PF13116 Protein of unknown function 697 988 2.1E-48 T 15-10-2018 IPR025263 Domain of unknown function DUF3971 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 Pfam PF00384 Molybdopterin oxidoreductase 64 478 4.9E-78 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 Pfam PF01568 Molydopterin dinucleotide binding domain 580 691 1.8E-31 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 SUPERFAMILY SSF53706 2 565 5.37E-182 T 15-10-2018 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 2 50 9.6E-18 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 Gene3D G3DSA:2.40.40.20 571 696 1.1E-41 T 15-10-2018 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 4 22 - T 15-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 PIRSF PIRSF036643 1 722 5.8E-152 T 15-10-2018 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 Gene3D G3DSA:2.20.25.90 1 51 3.4E-15 T 15-10-2018 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 Pfam PF04324 BFD-like [2Fe-2S] binding domain 840 890 5.8E-14 T 15-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 Gene3D G3DSA:3.40.228.10 132 563 4.4E-172 T 15-10-2018 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 Gene3D G3DSA:3.40.50.740 64 560 4.4E-172 T 15-10-2018 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 SMART SM00926 1 52 1.7E-17 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 Gene3D G3DSA:1.10.10.1100 840 893 8.7E-9 T 15-10-2018 THII_1778 7a0098e63e3efb3dd14904e34eb3af37 897 SUPERFAMILY SSF50692 570 709 1.83E-46 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily THII_3215 1afcd522aecdc8ec921195416a014d84 156 SUPERFAMILY SSF52980 17 133 3.16E-19 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3215 1afcd522aecdc8ec921195416a014d84 156 Gene3D G3DSA:3.90.1570.10 7 147 4.0E-18 T 15-10-2018 THII_3215 1afcd522aecdc8ec921195416a014d84 156 Pfam PF05685 Putative restriction endonuclease 16 138 2.4E-13 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3728 6464d8ec2524d3f204bdf0c38ccdc1ea 1545 Gene3D G3DSA:3.20.20.70 449 817 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3728 6464d8ec2524d3f204bdf0c38ccdc1ea 1545 Pfam PF00310 Glutamine amidotransferases class-II 22 444 1.4E-187 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain THII_3728 6464d8ec2524d3f204bdf0c38ccdc1ea 1545 Gene3D G3DSA:3.60.20.10 22 561 0.0 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_3728 6464d8ec2524d3f204bdf0c38ccdc1ea 1545 SUPERFAMILY SSF69336 1237 1531 1.44E-97 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 THII_3728 6464d8ec2524d3f204bdf0c38ccdc1ea 1545 SUPERFAMILY SSF51395 463 1223 9.62E-268 T 15-10-2018 THII_3728 6464d8ec2524d3f204bdf0c38ccdc1ea 1545 Gene3D G3DSA:2.160.20.60 1240 1540 1.6E-113 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 THII_3728 6464d8ec2524d3f204bdf0c38ccdc1ea 1545 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3728 6464d8ec2524d3f204bdf0c38ccdc1ea 1545 Pfam PF01493 GXGXG motif 1268 1453 5.9E-83 T 15-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 THII_3728 6464d8ec2524d3f204bdf0c38ccdc1ea 1545 Pfam PF04898 Glutamate synthase central domain 472 757 7.1E-113 T 15-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 THII_3728 6464d8ec2524d3f204bdf0c38ccdc1ea 1545 Pfam PF01645 Conserved region in glutamate synthase 821 1188 8.0E-160 T 15-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 THII_3728 6464d8ec2524d3f204bdf0c38ccdc1ea 1545 SUPERFAMILY SSF56235 22 446 8.68E-158 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_0290 b899ecd2443b9cdac3fe26ee176a1506 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.516 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 THII_0290 b899ecd2443b9cdac3fe26ee176a1506 129 SUPERFAMILY SSF53137 14 129 9.16E-47 T 15-10-2018 THII_0290 b899ecd2443b9cdac3fe26ee176a1506 129 PIRSF PIRSF002131 1 129 4.7E-53 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 THII_0290 b899ecd2443b9cdac3fe26ee176a1506 129 Gene3D G3DSA:3.30.420.80 1 129 2.4E-55 T 15-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 THII_0290 b899ecd2443b9cdac3fe26ee176a1506 129 Pfam PF00411 Ribosomal protein S11 19 128 1.2E-49 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 THII_0290 b899ecd2443b9cdac3fe26ee176a1506 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 15-10-2018 IPR018102 Ribosomal S11, conserved site THII_0290 b899ecd2443b9cdac3fe26ee176a1506 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.4E-55 T 15-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Gene3D G3DSA:3.40.1170.10 1 111 7.6E-47 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SMART SM00305 1010 1054 5.2E-5 T 15-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SUPERFAMILY SSF48334 254 550 1.83E-83 T 15-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SUPERFAMILY SSF52540 553 613 1.86E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SUPERFAMILY SSF53150 104 253 8.24E-39 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SUPERFAMILY SSF55608 743 803 1.85E-6 T 15-10-2018 IPR027434 Homing endonuclease THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Gene3D G3DSA:3.40.50.300 1049 1245 2.0E-78 T 15-10-2018 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Gene3D G3DSA:3.40.50.300 553 630 6.4E-14 T 15-10-2018 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Pfam PF05192 MutS domain III 256 545 1.1E-39 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Pfam PF01624 MutS domain I 1 109 6.3E-38 T 15-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Pfam PF14890 Intein splicing domain 656 1048 9.0E-16 T 15-10-2018 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SUPERFAMILY SSF55608 823 921 2.67E-16 T 15-10-2018 IPR027434 Homing endonuclease THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Pfam PF14528 LAGLIDADG-like domain 840 913 2.1E-14 T 15-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Gene3D G3DSA:3.10.28.10 749 905 9.5E-34 T 15-10-2018 IPR027434 Homing endonuclease THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Gene3D G3DSA:1.10.1420.10 253 545 3.9E-99 T 15-10-2018 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Pfam PF05190 MutS family domain IV 414 505 5.4E-29 T 15-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Pfam PF00488 MutS domain V 1048 1225 3.2E-76 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 PIRSF PIRSF037677 1 187 1.0E-22 T 15-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 PIRSF PIRSF037677 210 610 2.1E-45 T 15-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 PIRSF PIRSF037677 1048 1244 4.9E-71 T 15-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SMART SM00533 270 577 2.0E-97 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SMART SM00534 1049 1222 6.5E-97 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Gene3D G3DSA:1.10.1420.10 373 489 3.9E-99 T 15-10-2018 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Gene3D G3DSA:2.170.16.10 960 1048 5.1E-10 T 15-10-2018 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Pfam PF05188 MutS domain II 119 240 1.7E-19 T 15-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 1274 22.032 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 PRINTS PR00379 Intein signature 868 883 1.3E-15 T 15-10-2018 IPR006142 Intein GO:0016539 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 PRINTS PR00379 Intein signature 840 852 1.3E-15 T 15-10-2018 IPR006142 Intein GO:0016539 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 PRINTS PR00379 Intein signature 673 686 1.3E-15 T 15-10-2018 IPR006142 Intein GO:0016539 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 PRINTS PR00379 Intein signature 1025 1042 1.3E-15 T 15-10-2018 IPR006142 Intein GO:0016539 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 PRINTS PR00379 Intein signature 747 759 1.3E-15 T 15-10-2018 IPR006142 Intein GO:0016539 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 1116 1132 - T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SMART SM00306 605 711 0.002 T 15-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Gene3D G3DSA:3.30.420.110 118 249 8.6E-30 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 608 4.2E-235 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 Gene3D G3DSA:2.170.16.10 631 748 1.0E-6 T 15-10-2018 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SUPERFAMILY SSF51294 606 1048 5.69E-25 T 15-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SUPERFAMILY SSF55271 1 105 4.71E-38 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 THII_2663 300ee8c12322a58ca93a133b45d982f6 1287 SUPERFAMILY SSF52540 1049 1226 2.39E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1294 7dc6244dd1cf796562692d15036f0357 174 SUPERFAMILY SSF52540 4 169 2.06E-19 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1294 7dc6244dd1cf796562692d15036f0357 174 Pfam PF00071 Ras family 46 171 3.9E-6 T 15-10-2018 IPR001806 Small GTPase GO:0003924|GO:0005525 THII_1294 7dc6244dd1cf796562692d15036f0357 174 Gene3D G3DSA:3.40.50.300 2 173 7.3E-20 T 15-10-2018 THII_0616 756d825666257ce2502d074bf68899f1 110 Pfam PF04358 DsrC like protein 4 110 5.9E-49 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE THII_0616 756d825666257ce2502d074bf68899f1 110 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 110 1.4E-51 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE THII_0616 756d825666257ce2502d074bf68899f1 110 Gene3D G3DSA:3.30.1420.10 1 39 7.9E-18 T 15-10-2018 THII_0616 756d825666257ce2502d074bf68899f1 110 Gene3D G3DSA:1.10.10.370 40 110 3.1E-36 T 15-10-2018 THII_0616 756d825666257ce2502d074bf68899f1 110 SUPERFAMILY SSF69721 3 110 8.76E-45 T 15-10-2018 IPR025526 DsrC-like domain superfamily THII_0616 756d825666257ce2502d074bf68899f1 110 PIRSF PIRSF006223 3 110 3.0E-46 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 Pfam PF00563 EAL domain 839 1076 5.8E-74 T 15-10-2018 IPR001633 EAL domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 Pfam PF13426 PAS domain 536 639 3.3E-13 T 15-10-2018 IPR000014 PAS domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 SUPERFAMILY SSF141868 838 1088 1.03E-85 T 15-10-2018 IPR035919 EAL domain superfamily THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 SMART SM01079 91 279 1.5E-15 T 15-10-2018 IPR006189 CHASE domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 650 821 2.4E-40 T 15-10-2018 IPR000160 GGDEF domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 Pfam PF03924 CHASE domain 95 274 4.0E-27 T 15-10-2018 IPR006189 CHASE domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 Gene3D G3DSA:3.20.20.450 837 1096 2.7E-98 T 15-10-2018 IPR035919 EAL domain superfamily THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 SUPERFAMILY SSF55785 385 511 4.01E-21 T 15-10-2018 IPR035965 PAS domain superfamily THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 Gene3D G3DSA:3.30.450.350 95 285 3.4E-21 T 15-10-2018 THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 SMART SM00091 400 466 7.6E-9 T 15-10-2018 IPR000014 PAS domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 SMART SM00091 525 593 5.0E-6 T 15-10-2018 IPR000014 PAS domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 Pfam PF00990 Diguanylate cyclase, GGDEF domain 652 818 4.3E-44 T 15-10-2018 IPR000160 GGDEF domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 SUPERFAMILY SSF55785 510 639 2.27E-25 T 15-10-2018 IPR035965 PAS domain superfamily THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 SMART SM00267 641 823 6.5E-52 T 15-10-2018 IPR000160 GGDEF domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 SUPERFAMILY SSF55073 657 824 2.28E-42 T 15-10-2018 IPR029787 Nucleotide cyclase THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 Gene3D G3DSA:3.30.70.270 646 836 1.5E-53 T 15-10-2018 THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 SMART SM00052 833 1081 6.2E-111 T 15-10-2018 IPR001633 EAL domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 522 648 2.0E-20 T 15-10-2018 IPR000014 PAS domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 397 519 3.4E-21 T 15-10-2018 IPR000014 PAS domain THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 SMART SM00086 473 513 0.011 T 15-10-2018 IPR001610 PAC motif THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 SMART SM00086 599 641 3.5E-6 T 15-10-2018 IPR001610 PAC motif THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 Gene3D G3DSA:3.30.450.20 511 639 3.6E-25 T 15-10-2018 THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 Gene3D G3DSA:3.30.450.20 386 510 3.6E-21 T 15-10-2018 THII_0777 17c017049f83c9b6ba2ac6cb927a18a5 1099 Pfam PF00989 PAS fold 401 510 2.4E-8 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_1765 7491598f9d00be5a61c1bf185c06149b 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 299 9.7E-6 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1765 7491598f9d00be5a61c1bf185c06149b 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 394 428 1.8E-7 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1765 7491598f9d00be5a61c1bf185c06149b 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 316 351 3.3E-6 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1765 7491598f9d00be5a61c1bf185c06149b 454 SUPERFAMILY SSF53448 1 251 1.0E-58 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1765 7491598f9d00be5a61c1bf185c06149b 454 Pfam PF12804 MobA-like NTP transferase domain 6 133 8.8E-20 T 15-10-2018 IPR025877 MobA-like NTP transferase THII_1765 7491598f9d00be5a61c1bf185c06149b 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 451 41.128 T 15-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 THII_1765 7491598f9d00be5a61c1bf185c06149b 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 454 2.8E-189 T 15-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 THII_1765 7491598f9d00be5a61c1bf185c06149b 454 SUPERFAMILY SSF51161 253 435 8.8E-52 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_1765 7491598f9d00be5a61c1bf185c06149b 454 Gene3D G3DSA:3.90.550.10 1 226 2.9E-59 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1765 7491598f9d00be5a61c1bf185c06149b 454 Gene3D G3DSA:2.160.10.10 227 454 1.1E-69 T 15-10-2018 THII_0897 7b3780c872aceb5f33cbea4b92665e76 94 SUPERFAMILY SSF143100 3 60 7.32E-17 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like THII_0897 7b3780c872aceb5f33cbea4b92665e76 94 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 7 69 2.0E-9 T 15-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system THII_0897 7b3780c872aceb5f33cbea4b92665e76 94 Gene3D G3DSA:3.30.160.250 5 75 2.1E-15 T 15-10-2018 THII_1471 50619537b30c939e54f7509c8c4f1b3b 218 Gene3D G3DSA:3.10.610.10 48 152 2.2E-30 T 15-10-2018 THII_1471 50619537b30c939e54f7509c8c4f1b3b 218 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 39 3.8E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_1471 50619537b30c939e54f7509c8c4f1b3b 218 Pfam PF07963 Prokaryotic N-terminal methylation motif 18 39 2.3E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_1471 50619537b30c939e54f7509c8c4f1b3b 218 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 18 215 4.1E-44 T 15-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 THII_1471 50619537b30c939e54f7509c8c4f1b3b 218 Pfam PF11612 Type II secretion system (T2SS), protein J 69 213 1.2E-42 T 15-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 THII_1471 50619537b30c939e54f7509c8c4f1b3b 218 SUPERFAMILY SSF54523 52 217 1.15E-40 T 15-10-2018 THII_2098 1769c5491365803942416bcef60d9702 656 Gene3D G3DSA:3.40.50.720 381 653 5.0E-55 T 15-10-2018 THII_2098 1769c5491365803942416bcef60d9702 656 SMART SM01007 20 221 2.1E-30 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal THII_2098 1769c5491365803942416bcef60d9702 656 Gene3D G3DSA:3.40.225.10 18 227 4.6E-59 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily THII_2098 1769c5491365803942416bcef60d9702 656 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 22 220 1.2E-25 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal THII_2098 1769c5491365803942416bcef60d9702 656 SUPERFAMILY SSF51735 408 651 4.31E-53 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2098 1769c5491365803942416bcef60d9702 656 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 411 428 4.0E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2098 1769c5491365803942416bcef60d9702 656 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 553 572 4.0E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2098 1769c5491365803942416bcef60d9702 656 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 479 490 4.0E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2098 1769c5491365803942416bcef60d9702 656 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 574 591 4.0E-19 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2098 1769c5491365803942416bcef60d9702 656 SUPERFAMILY SSF53639 18 225 4.71E-32 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily THII_2098 1769c5491365803942416bcef60d9702 656 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 416 651 3.6E-43 T 15-10-2018 THII_2098 1769c5491365803942416bcef60d9702 656 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 540 568 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 THII_1795 6dc87565d33cd326e837fb8efeb07a86 117 Gene3D G3DSA:1.20.120.30 2 110 1.4E-8 T 15-10-2018 THII_1795 6dc87565d33cd326e837fb8efeb07a86 117 Pfam PF13682 Chemoreceptor zinc-binding domain 12 75 1.6E-13 T 15-10-2018 IPR025991 Chemoreceptor zinc-binding domain THII_2981 9fb3a7f983556d852d30ed8b442e4282 476 SMART SM00382 171 314 4.2E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2981 9fb3a7f983556d852d30ed8b442e4282 476 SMART SM00448 20 131 6.3E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2981 9fb3a7f983556d852d30ed8b442e4282 476 Pfam PF00158 Sigma-54 interaction domain 151 317 1.2E-67 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 THII_2981 9fb3a7f983556d852d30ed8b442e4282 476 SUPERFAMILY SSF52540 150 395 3.6E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2981 9fb3a7f983556d852d30ed8b442e4282 476 Gene3D G3DSA:3.40.50.2300 17 143 1.6E-32 T 15-10-2018 THII_2981 9fb3a7f983556d852d30ed8b442e4282 476 Gene3D G3DSA:1.10.8.60 322 401 5.2E-21 T 15-10-2018 THII_2981 9fb3a7f983556d852d30ed8b442e4282 476 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 364 373 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site THII_2981 9fb3a7f983556d852d30ed8b442e4282 476 Pfam PF00072 Response regulator receiver domain 22 131 4.2E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2981 9fb3a7f983556d852d30ed8b442e4282 476 SUPERFAMILY SSF52172 19 195 7.12E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_2981 9fb3a7f983556d852d30ed8b442e4282 476 Gene3D G3DSA:3.40.50.300 144 321 1.6E-60 T 15-10-2018 THII_0810 3185db589a3aef75dc4a0a419037cf99 397 Gene3D G3DSA:2.40.30.170 44 323 2.0E-50 T 15-10-2018 THII_0810 3185db589a3aef75dc4a0a419037cf99 397 Gene3D G3DSA:1.10.287.470 89 191 2.0E-50 T 15-10-2018 THII_0810 3185db589a3aef75dc4a0a419037cf99 397 Pfam PF13437 HlyD family secretion protein 204 280 5.2E-12 T 15-10-2018 THII_0810 3185db589a3aef75dc4a0a419037cf99 397 Gene3D G3DSA:2.40.50.100 55 237 2.0E-50 T 15-10-2018 THII_0810 3185db589a3aef75dc4a0a419037cf99 397 SUPERFAMILY SSF111369 44 254 1.57E-8 T 15-10-2018 THII_0810 3185db589a3aef75dc4a0a419037cf99 397 Gene3D G3DSA:2.40.420.20 40 381 2.0E-50 T 15-10-2018 THII_2179 b6e7875decb6071b6498e1ba704ea128 350 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 211 5.0E-60 T 15-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_2179 b6e7875decb6071b6498e1ba704ea128 350 SUPERFAMILY SSF52540 5 217 5.46E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2179 b6e7875decb6071b6498e1ba704ea128 350 Gene3D G3DSA:3.40.50.300 3 176 5.1E-55 T 15-10-2018 THII_2179 b6e7875decb6071b6498e1ba704ea128 350 Pfam PF13177 DNA polymerase III, delta subunit 11 176 1.5E-47 T 15-10-2018 THII_2179 b6e7875decb6071b6498e1ba704ea128 350 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 225 319 2.7E-9 T 15-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_2179 b6e7875decb6071b6498e1ba704ea128 350 SMART SM00382 24 178 6.4E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2127 71494700b02adb914c20e39234a4a787 98 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 94 1.4E-8 T 15-10-2018 IPR009241 Toxin HigB-like THII_2127 71494700b02adb914c20e39234a4a787 98 PIRSF PIRSF028744 1 98 3.4E-33 T 15-10-2018 IPR014056 Addiction module killer protein, predicted THII_2127 71494700b02adb914c20e39234a4a787 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 4 96 1.2E-32 T 15-10-2018 IPR014056 Addiction module killer protein, predicted THII_1057 e94bc197d47c3dec0a136c494c775db7 398 Pfam PF14306 PUA-like domain 2 165 1.4E-30 T 15-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 THII_1057 e94bc197d47c3dec0a136c494c775db7 398 Gene3D G3DSA:3.10.400.10 1 193 1.4E-58 T 15-10-2018 THII_1057 e94bc197d47c3dec0a136c494c775db7 398 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 4 388 1.6E-121 T 15-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 THII_1057 e94bc197d47c3dec0a136c494c775db7 398 SUPERFAMILY SSF88697 1 171 9.94E-38 T 15-10-2018 IPR015947 PUA-like superfamily THII_1057 e94bc197d47c3dec0a136c494c775db7 398 Gene3D G3DSA:3.40.50.620 194 395 5.0E-81 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1057 e94bc197d47c3dec0a136c494c775db7 398 SUPERFAMILY SSF52374 175 393 4.38E-79 T 15-10-2018 THII_1057 e94bc197d47c3dec0a136c494c775db7 398 Pfam PF01747 ATP-sulfurylase 178 388 3.8E-76 T 15-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 THII_1057 e94bc197d47c3dec0a136c494c775db7 398 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 27 393 43.902 T 15-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 THII_3703 1471184fe6c117469a1a5dd7cadad28e 342 SUPERFAMILY SSF55729 94 238 1.75E-11 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_0200 207e32904d641faaebc01a13e3e85aa2 278 Pfam PF05175 Methyltransferase small domain 105 190 1.3E-14 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 THII_0200 207e32904d641faaebc01a13e3e85aa2 278 Gene3D G3DSA:3.40.50.150 86 277 5.9E-58 T 15-10-2018 THII_0200 207e32904d641faaebc01a13e3e85aa2 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 182 188 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 THII_0200 207e32904d641faaebc01a13e3e85aa2 278 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 17 274 2.4E-78 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 THII_0200 207e32904d641faaebc01a13e3e85aa2 278 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 24 273 2.6E-90 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 THII_0200 207e32904d641faaebc01a13e3e85aa2 278 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 277 42.578 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 THII_0200 207e32904d641faaebc01a13e3e85aa2 278 SUPERFAMILY SSF53335 4 274 1.45E-56 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0200 207e32904d641faaebc01a13e3e85aa2 278 Gene3D G3DSA:1.10.8.10 3 85 5.7E-24 T 15-10-2018 THII_0605 d577ef1894dfc9fccde1981ec1e0ac04 249 Gene3D G3DSA:3.90.550.10 5 248 9.4E-81 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0605 d577ef1894dfc9fccde1981ec1e0ac04 249 Pfam PF02348 Cytidylyltransferase 7 222 5.8E-50 T 15-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 THII_0605 d577ef1894dfc9fccde1981ec1e0ac04 249 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 4 248 33.392 T 15-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 THII_0605 d577ef1894dfc9fccde1981ec1e0ac04 249 SUPERFAMILY SSF53448 5 246 2.5E-53 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0605 d577ef1894dfc9fccde1981ec1e0ac04 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 7 241 2.9E-62 T 15-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 THII_0159 7801fbfb0386e53f212e9393bc82499e 119 SUPERFAMILY SSF53041 5 101 7.59E-12 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 THII_0159 7801fbfb0386e53f212e9393bc82499e 119 SMART SM00857 2 108 0.0064 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 THII_0159 7801fbfb0386e53f212e9393bc82499e 119 Gene3D G3DSA:3.40.50.1390 1 72 1.1E-10 T 15-10-2018 THII_0159 7801fbfb0386e53f212e9393bc82499e 119 Pfam PF00239 Resolvase, N terminal domain 10 94 8.5E-8 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 THII_3631 f8c90ddc79e1a95ef9b770ec15ef6d77 281 SUPERFAMILY SSF51569 2 268 2.38E-102 T 15-10-2018 THII_3631 f8c90ddc79e1a95ef9b770ec15ef6d77 281 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 50.819 T 15-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 THII_3631 f8c90ddc79e1a95ef9b770ec15ef6d77 281 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 267 1.3E-120 T 15-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 THII_3631 f8c90ddc79e1a95ef9b770ec15ef6d77 281 Gene3D G3DSA:3.20.20.70 2 274 6.7E-102 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3631 f8c90ddc79e1a95ef9b770ec15ef6d77 281 Pfam PF00793 DAHP synthetase I family 12 266 3.5E-65 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 THII_1791 256742f1678f9b8bead6efa84eda74cf 1936 SUPERFAMILY SSF49313 1389 1482 1.57E-8 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_1791 256742f1678f9b8bead6efa84eda74cf 1936 Pfam PF14252 Domain of unknown function (DUF4347) 33 199 3.8E-52 T 15-10-2018 IPR025592 Domain of unknown function DUF4347 THII_1791 256742f1678f9b8bead6efa84eda74cf 1936 Gene3D G3DSA:2.60.40.10 685 788 4.2E-12 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1791 256742f1678f9b8bead6efa84eda74cf 1936 Gene3D G3DSA:2.60.40.10 796 901 1.7E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1791 256742f1678f9b8bead6efa84eda74cf 1936 Gene3D G3DSA:2.60.40.10 1168 1274 3.7E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1791 256742f1678f9b8bead6efa84eda74cf 1936 Gene3D G3DSA:2.60.40.10 570 672 3.3E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1791 256742f1678f9b8bead6efa84eda74cf 1936 Gene3D G3DSA:2.60.40.60 1387 1485 1.2E-7 T 15-10-2018 THII_1791 256742f1678f9b8bead6efa84eda74cf 1936 Gene3D G3DSA:2.60.40.60 1705 1799 6.1E-6 T 15-10-2018 THII_1791 256742f1678f9b8bead6efa84eda74cf 1936 SUPERFAMILY SSF49313 1712 1795 3.85E-7 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_3463 e701ba61fd0367d0e4c88f27ca296c8e 403 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_3463 e701ba61fd0367d0e4c88f27ca296c8e 403 Pfam PF00579 tRNA synthetases class I (W and Y) 7 350 1.8E-58 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_3463 e701ba61fd0367d0e4c88f27ca296c8e 403 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 7 176 2.7E-55 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 THII_3463 e701ba61fd0367d0e4c88f27ca296c8e 403 Gene3D G3DSA:3.40.50.620 6 235 1.7E-72 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3463 e701ba61fd0367d0e4c88f27ca296c8e 403 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 70 89 8.4E-20 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 THII_3463 e701ba61fd0367d0e4c88f27ca296c8e 403 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 148 169 8.4E-20 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 THII_3463 e701ba61fd0367d0e4c88f27ca296c8e 403 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 19 35 8.4E-20 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 THII_3463 e701ba61fd0367d0e4c88f27ca296c8e 403 SUPERFAMILY SSF52374 8 400 1.42E-85 T 15-10-2018 THII_3463 e701ba61fd0367d0e4c88f27ca296c8e 403 Gene3D G3DSA:1.10.240.10 263 368 2.7E-40 T 15-10-2018 THII_3887 ac3cc07487e26aacd56db6eb05ea9363 94 Pfam PF13470 PIN domain 39 68 3.2E-6 T 15-10-2018 IPR002716 PIN domain THII_1562 1e18ff6dc33f9d6dc1f50cb1fd16aedb 264 Gene3D G3DSA:3.20.20.60 1 264 5.8E-110 T 15-10-2018 THII_1562 1e18ff6dc33f9d6dc1f50cb1fd16aedb 264 SUPERFAMILY SSF51621 3 264 9.03E-106 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 THII_1562 1e18ff6dc33f9d6dc1f50cb1fd16aedb 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 6 264 8.0E-107 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 THII_1562 1e18ff6dc33f9d6dc1f50cb1fd16aedb 264 PIRSF PIRSF000388 1 264 4.1E-101 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 THII_1562 1e18ff6dc33f9d6dc1f50cb1fd16aedb 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 259 1.2E-109 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 THII_1562 1e18ff6dc33f9d6dc1f50cb1fd16aedb 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 264 43.296 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 THII_0489 f33bca52adc37abb95ea95d27dd6c1dd 180 Gene3D G3DSA:3.30.70.1290 3 169 2.8E-28 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_0489 f33bca52adc37abb95ea95d27dd6c1dd 180 SUPERFAMILY SSF143422 8 149 5.1E-15 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_0489 f33bca52adc37abb95ea95d27dd6c1dd 180 SMART SM01321 10 143 0.0026 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_1093 517d737bc7279d57c4708794e8d8e854 237 Gene3D G3DSA:3.40.50.150 18 235 8.9E-29 T 15-10-2018 THII_1093 517d737bc7279d57c4708794e8d8e854 237 Pfam PF08242 Methyltransferase domain 41 133 2.6E-10 T 15-10-2018 IPR013217 Methyltransferase type 12 THII_1093 517d737bc7279d57c4708794e8d8e854 237 SUPERFAMILY SSF53335 23 235 5.58E-31 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2521 01b866b1abec49fa6ebef5fdb7cd4159 154 Pfam PF08881 CVNH domain 45 148 5.9E-13 T 15-10-2018 IPR011058 Cyanovirin-N THII_2521 01b866b1abec49fa6ebef5fdb7cd4159 154 Gene3D G3DSA:2.30.60.10 42 150 7.5E-25 T 15-10-2018 IPR036673 Cyanovirin-N superfamily THII_2521 01b866b1abec49fa6ebef5fdb7cd4159 154 SMART SM01111 44 149 0.0097 T 15-10-2018 IPR011058 Cyanovirin-N THII_2521 01b866b1abec49fa6ebef5fdb7cd4159 154 SUPERFAMILY SSF51322 43 149 4.84E-11 T 15-10-2018 IPR036673 Cyanovirin-N superfamily THII_2573 01b866b1abec49fa6ebef5fdb7cd4159 154 Pfam PF08881 CVNH domain 45 148 5.9E-13 T 15-10-2018 IPR011058 Cyanovirin-N THII_2573 01b866b1abec49fa6ebef5fdb7cd4159 154 Gene3D G3DSA:2.30.60.10 42 150 7.5E-25 T 15-10-2018 IPR036673 Cyanovirin-N superfamily THII_2573 01b866b1abec49fa6ebef5fdb7cd4159 154 SMART SM01111 44 149 0.0097 T 15-10-2018 IPR011058 Cyanovirin-N THII_2573 01b866b1abec49fa6ebef5fdb7cd4159 154 SUPERFAMILY SSF51322 43 149 4.84E-11 T 15-10-2018 IPR036673 Cyanovirin-N superfamily THII_2613 ab30317ccbc4e0e3d9ec9cdee80612ee 141 SUPERFAMILY SSF69279 13 119 2.38E-17 T 15-10-2018 THII_2613 ab30317ccbc4e0e3d9ec9cdee80612ee 141 Pfam PF05954 Phage late control gene D protein (GPD) 18 92 7.9E-8 T 15-10-2018 THII_2613 ab30317ccbc4e0e3d9ec9cdee80612ee 141 Gene3D G3DSA:2.30.110.50 53 95 5.1E-12 T 15-10-2018 THII_2613 ab30317ccbc4e0e3d9ec9cdee80612ee 141 Gene3D G3DSA:3.30.1920.30 17 52 5.1E-12 T 15-10-2018 THII_2147 ba4aa231313b6bc236a33847a41101b1 133 SUPERFAMILY SSF88723 1 121 7.57E-19 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2147 ba4aa231313b6bc236a33847a41101b1 133 Gene3D G3DSA:3.40.50.1010 1 124 4.2E-11 T 15-10-2018 THII_2147 ba4aa231313b6bc236a33847a41101b1 133 Pfam PF01850 PIN domain 2 117 3.2E-14 T 15-10-2018 IPR002716 PIN domain THII_1054 b4e1778d759143259d28b6b857de062e 628 SUPERFAMILY SSF81901 509 597 7.85E-16 T 15-10-2018 THII_1054 b4e1778d759143259d28b6b857de062e 628 Pfam PF08238 Sel1 repeat 416 429 0.65 T 15-10-2018 IPR006597 Sel1-like repeat THII_1054 b4e1778d759143259d28b6b857de062e 628 Pfam PF08238 Sel1 repeat 542 553 160.0 T 15-10-2018 IPR006597 Sel1-like repeat THII_1054 b4e1778d759143259d28b6b857de062e 628 Pfam PF08238 Sel1 repeat 466 501 1.2E-9 T 15-10-2018 IPR006597 Sel1-like repeat THII_1054 b4e1778d759143259d28b6b857de062e 628 Pfam PF08238 Sel1 repeat 555 589 1.5E-6 T 15-10-2018 IPR006597 Sel1-like repeat THII_1054 b4e1778d759143259d28b6b857de062e 628 Pfam PF08238 Sel1 repeat 430 465 3.1E-6 T 15-10-2018 IPR006597 Sel1-like repeat THII_1054 b4e1778d759143259d28b6b857de062e 628 Gene3D G3DSA:1.25.40.10 510 608 1.5E-18 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1054 b4e1778d759143259d28b6b857de062e 628 Gene3D G3DSA:1.25.40.10 301 509 7.1E-35 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1054 b4e1778d759143259d28b6b857de062e 628 SMART SM00671 554 589 5.3E-9 T 15-10-2018 IPR006597 Sel1-like repeat THII_1054 b4e1778d759143259d28b6b857de062e 628 SMART SM00671 521 553 280.0 T 15-10-2018 IPR006597 Sel1-like repeat THII_1054 b4e1778d759143259d28b6b857de062e 628 SMART SM00671 430 465 1.2E-10 T 15-10-2018 IPR006597 Sel1-like repeat THII_1054 b4e1778d759143259d28b6b857de062e 628 SMART SM00671 466 501 7.9E-11 T 15-10-2018 IPR006597 Sel1-like repeat THII_1054 b4e1778d759143259d28b6b857de062e 628 Gene3D G3DSA:1.10.510.10 69 219 1.0E-7 T 15-10-2018 THII_1054 b4e1778d759143259d28b6b857de062e 628 SUPERFAMILY SSF81901 416 504 8.24E-26 T 15-10-2018 THII_1054 b4e1778d759143259d28b6b857de062e 628 SUPERFAMILY SSF56112 39 219 4.07E-12 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_1054 b4e1778d759143259d28b6b857de062e 628 Gene3D G3DSA:3.30.200.20 42 111 1.0E-7 T 15-10-2018 THII_3295 8455f358208ed349c676ba4037b90463 190 Gene3D G3DSA:3.30.420.470 9 181 3.1E-13 T 15-10-2018 THII_3295 8455f358208ed349c676ba4037b90463 190 Pfam PF13358 DDE superfamily endonuclease 18 160 1.8E-23 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 382 416 3.2E-10 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 418 452 2.4E-8 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 61 93 3.7E-8 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 201 235 6.6E-8 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 96 129 7.3E-8 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 237 271 7.2E-9 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 40 58 6.8 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 166 200 1.9E-5 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 274 308 7.5E-9 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 131 163 4.3E-5 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 311 344 2.4E-9 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Pfam PF08238 Sel1 repeat 347 380 4.2E-7 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 Gene3D G3DSA:1.25.40.10 145 272 3.2E-41 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0074 a55554ee142e07783388bc54d020ba2c 464 Gene3D G3DSA:1.25.40.10 275 464 6.7E-68 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0074 a55554ee142e07783388bc54d020ba2c 464 Gene3D G3DSA:1.25.40.10 23 144 5.0E-35 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0074 a55554ee142e07783388bc54d020ba2c 464 SUPERFAMILY SSF81901 29 181 2.22E-39 T 15-10-2018 THII_0074 a55554ee142e07783388bc54d020ba2c 464 SUPERFAMILY SSF81901 291 460 2.7E-50 T 15-10-2018 THII_0074 a55554ee142e07783388bc54d020ba2c 464 SUPERFAMILY SSF81901 148 316 3.23E-46 T 15-10-2018 THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 345 380 1.5E-7 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 309 344 5.2E-10 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 417 452 7.0E-11 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 59 94 2.6E-9 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 27 58 2.4 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 237 272 2.1E-10 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 131 164 9.9E-7 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 381 416 2.6E-11 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 273 308 5.4E-11 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 165 200 4.4E-7 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 201 236 1.4E-8 T 15-10-2018 IPR006597 Sel1-like repeat THII_0074 a55554ee142e07783388bc54d020ba2c 464 SMART SM00671 95 130 1.1E-7 T 15-10-2018 IPR006597 Sel1-like repeat THII_2885 530518432f134d886c2581e12cc25c3a 230 Gene3D G3DSA:1.10.760.10 39 119 7.4E-17 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2885 530518432f134d886c2581e12cc25c3a 230 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 132 208 2.3E-9 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_2885 530518432f134d886c2581e12cc25c3a 230 SUPERFAMILY SSF46626 130 214 6.45E-18 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2885 530518432f134d886c2581e12cc25c3a 230 SUPERFAMILY SSF46626 34 118 4.56E-14 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2885 530518432f134d886c2581e12cc25c3a 230 Gene3D G3DSA:1.10.760.10 130 211 2.0E-20 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2885 530518432f134d886c2581e12cc25c3a 230 Pfam PF00034 Cytochrome c 41 118 2.3E-6 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_2907 999fe867c6023c3b4642d80275c651a5 576 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 453 471 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 THII_2907 999fe867c6023c3b4642d80275c651a5 576 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 188 199 - T 15-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 THII_2907 999fe867c6023c3b4642d80275c651a5 576 SUPERFAMILY SSF52009 115 237 6.02E-29 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 THII_2907 999fe867c6023c3b4642d80275c651a5 576 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 4.9E-30 T 15-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 THII_2907 999fe867c6023c3b4642d80275c651a5 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 453 468 9.4E-28 T 15-10-2018 THII_2907 999fe867c6023c3b4642d80275c651a5 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 470 485 9.4E-28 T 15-10-2018 THII_2907 999fe867c6023c3b4642d80275c651a5 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 506 518 9.4E-28 T 15-10-2018 THII_2907 999fe867c6023c3b4642d80275c651a5 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 297 316 9.4E-28 T 15-10-2018 THII_2907 999fe867c6023c3b4642d80275c651a5 576 Gene3D G3DSA:1.10.274.10 24 149 8.9E-72 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 THII_2907 999fe867c6023c3b4642d80275c651a5 576 SUPERFAMILY SSF47831 27 146 3.27E-30 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 THII_2907 999fe867c6023c3b4642d80275c651a5 576 PIRSF PIRSF000732 1 576 6.4E-212 T 15-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 THII_2907 999fe867c6023c3b4642d80275c651a5 576 SUPERFAMILY SSF51621 253 548 4.97E-97 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 THII_2907 999fe867c6023c3b4642d80275c651a5 576 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 256 546 3.3E-103 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 THII_2907 999fe867c6023c3b4642d80275c651a5 576 Gene3D G3DSA:3.20.20.60 238 575 1.2E-113 T 15-10-2018 THII_2907 999fe867c6023c3b4642d80275c651a5 576 Gene3D G3DSA:3.50.30.10 7 237 8.9E-72 T 15-10-2018 THII_2907 999fe867c6023c3b4642d80275c651a5 576 Pfam PF00391 PEP-utilising enzyme, mobile domain 159 229 1.9E-22 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 THII_2907 999fe867c6023c3b4642d80275c651a5 576 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 569 1.0E-172 T 15-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 THII_1422 674747ce2eb24f3d86896e3fc290b28d 587 SUPERFAMILY SSF69322 344 577 3.01E-11 T 15-10-2018 THII_1422 674747ce2eb24f3d86896e3fc290b28d 587 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 64 91 9.7E-8 T 15-10-2018 THII_1422 674747ce2eb24f3d86896e3fc290b28d 587 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 156 178 3.6E-6 T 15-10-2018 THII_1422 674747ce2eb24f3d86896e3fc290b28d 587 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 101 125 3.5E-6 T 15-10-2018 THII_1422 674747ce2eb24f3d86896e3fc290b28d 587 SUPERFAMILY SSF50985 33 335 2.62E-30 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_1422 674747ce2eb24f3d86896e3fc290b28d 587 Gene3D G3DSA:2.130.10.30 29 133 3.8E-21 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_1422 674747ce2eb24f3d86896e3fc290b28d 587 Gene3D G3DSA:2.130.10.30 134 353 6.9E-20 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 SMART SM00359 283 366 1.4E-16 T 15-10-2018 IPR002478 PUA domain GO:0003723 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 SUPERFAMILY SSF88697 283 373 2.43E-24 T 15-10-2018 IPR015947 PUA-like superfamily THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 Gene3D G3DSA:3.40.1160.10 1 270 9.6E-89 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 ProSitePatterns PS00902 Glutamate 5-kinase signature. 213 230 - T 15-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 SUPERFAMILY SSF53633 11 262 4.84E-67 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 Hamap MF_00456 Glutamate 5-kinase [proB]. 11 265 34.927 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 Gene3D G3DSA:2.30.130.10 272 374 5.9E-33 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 372 1.5E-125 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 Pfam PF01472 PUA domain 283 357 6.3E-21 T 15-10-2018 IPR002478 PUA domain GO:0003723 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 PRINTS PR00474 Glutamate 5-kinase family signature 122 143 6.6E-51 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 PRINTS PR00474 Glutamate 5-kinase family signature 82 110 6.6E-51 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 PRINTS PR00474 Glutamate 5-kinase family signature 154 181 6.6E-51 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 PRINTS PR00474 Glutamate 5-kinase family signature 48 62 6.6E-51 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 PRINTS PR00474 Glutamate 5-kinase family signature 215 235 6.6E-51 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 PIRSF PIRSF000729 6 374 3.1E-127 T 15-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 THII_2090 b140ee434011eef96ec2ddbc2d62c322 374 Pfam PF00696 Amino acid kinase family 11 240 1.7E-40 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 THII_2161 182f4860f376a03fc3bde48df879c925 209 PIRSF PIRSF006091 1 208 4.3E-77 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 THII_2161 182f4860f376a03fc3bde48df879c925 209 SMART SM00900 102 194 8.1E-36 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 THII_2161 182f4860f376a03fc3bde48df879c925 209 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 3 196 25.401 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 THII_2161 182f4860f376a03fc3bde48df879c925 209 Pfam PF04205 FMN-binding domain 102 191 1.5E-18 T 15-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 THII_2161 182f4860f376a03fc3bde48df879c925 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 11 195 4.8E-60 T 15-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 THII_0464 753be5e1aca377fc2cfb6a9b427f6a17 464 Gene3D G3DSA:3.40.50.12240 1 459 4.2E-167 T 15-10-2018 THII_0464 753be5e1aca377fc2cfb6a9b427f6a17 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 341 350 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_0464 753be5e1aca377fc2cfb6a9b427f6a17 464 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 3 459 54.019 T 15-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_0464 753be5e1aca377fc2cfb6a9b427f6a17 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 350 2.4E-66 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_0464 753be5e1aca377fc2cfb6a9b427f6a17 464 SUPERFAMILY SSF52540 78 355 6.91E-83 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0464 753be5e1aca377fc2cfb6a9b427f6a17 464 SUPERFAMILY SSF47917 361 417 1.73E-5 T 15-10-2018 THII_2999 d038b4c3aac16f5c6be92df76fc981a8 195 SUPERFAMILY SSF110997 119 188 3.79E-16 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 THII_2999 d038b4c3aac16f5c6be92df76fc981a8 195 Gene3D G3DSA:3.30.70.1070 117 193 5.0E-15 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 THII_2999 d038b4c3aac16f5c6be92df76fc981a8 195 Pfam PF05036 Sporulation related domain 119 185 3.9E-15 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 Pfam PF14450 Cell division protein FtsA 206 373 2.1E-23 T 15-10-2018 THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 SUPERFAMILY SSF53067 7 196 1.4E-64 T 15-10-2018 THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 Gene3D G3DSA:3.90.640.10 234 299 9.4E-125 T 15-10-2018 THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 Pfam PF14450 Cell division protein FtsA 9 179 6.6E-10 T 15-10-2018 THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 PIRSF PIRSF003101 1 411 1.1E-158 T 15-10-2018 IPR020823 Cell division protein FtsA THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 Gene3D G3DSA:3.30.420.40 11 370 9.4E-125 T 15-10-2018 THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 Gene3D G3DSA:3.30.1490.110 86 168 9.4E-125 T 15-10-2018 THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 411 31.95 T 15-10-2018 IPR020823 Cell division protein FtsA THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 SMART SM00842 8 195 2.1E-108 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 SUPERFAMILY SSF53067 197 376 6.18E-50 T 15-10-2018 THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 376 3.7E-156 T 15-10-2018 IPR020823 Cell division protein FtsA THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 4.7E-35 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 THII_2537 bab5934116f466002cc35dcbc35fc0ce 411 Gene3D G3DSA:3.30.420.40 196 351 9.4E-125 T 15-10-2018 THII_1251 254c27b22212000a67afb8c35d81732d 318 Gene3D G3DSA:3.40.1390.20 4 132 5.3E-16 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily THII_1251 254c27b22212000a67afb8c35d81732d 318 Pfam PF02603 HPr Serine kinase N terminus 5 130 8.1E-15 T 15-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 THII_1251 254c27b22212000a67afb8c35d81732d 318 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 5 308 1.8E-98 T 15-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 THII_1251 254c27b22212000a67afb8c35d81732d 318 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 152 165 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_1251 254c27b22212000a67afb8c35d81732d 318 Gene3D G3DSA:3.40.50.300 133 314 2.0E-65 T 15-10-2018 THII_1251 254c27b22212000a67afb8c35d81732d 318 Pfam PF07475 HPr Serine kinase C-terminal domain 134 303 1.1E-61 T 15-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 THII_1251 254c27b22212000a67afb8c35d81732d 318 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 313 32.687 T 15-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 THII_1251 254c27b22212000a67afb8c35d81732d 318 SUPERFAMILY SSF75138 9 133 3.92E-17 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily THII_1251 254c27b22212000a67afb8c35d81732d 318 SUPERFAMILY SSF53795 136 304 4.58E-35 T 15-10-2018 THII_0549 19ff1446fbc3b7b8bc96e838f3393fdb 349 Gene3D G3DSA:3.40.50.180 158 349 3.5E-63 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal THII_0549 19ff1446fbc3b7b8bc96e838f3393fdb 349 SMART SM00448 5 127 3.4E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0549 19ff1446fbc3b7b8bc96e838f3393fdb 349 SUPERFAMILY SSF52172 5 111 1.57E-26 T 15-10-2018 IPR011006 CheY-like superfamily THII_0549 19ff1446fbc3b7b8bc96e838f3393fdb 349 SUPERFAMILY SSF52738 160 348 3.4E-57 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal THII_0549 19ff1446fbc3b7b8bc96e838f3393fdb 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 349 35.013 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 THII_0549 19ff1446fbc3b7b8bc96e838f3393fdb 349 Gene3D G3DSA:3.40.50.2300 3 133 1.3E-30 T 15-10-2018 THII_0549 19ff1446fbc3b7b8bc96e838f3393fdb 349 Pfam PF00072 Response regulator receiver domain 7 110 2.5E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0549 19ff1446fbc3b7b8bc96e838f3393fdb 349 Pfam PF01339 CheB methylesterase 165 345 5.6E-54 T 15-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 THII_0549 19ff1446fbc3b7b8bc96e838f3393fdb 349 PIRSF PIRSF000876 2 349 5.1E-112 T 15-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 THII_1226 c9288a13444528a77f05dde3b480723f 97 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 2 82 8.0E-23 T 15-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 THII_1226 c9288a13444528a77f05dde3b480723f 97 Gene3D G3DSA:1.20.1280.290 3 83 6.8E-5 T 15-10-2018 THII_1226 c9288a13444528a77f05dde3b480723f 97 SMART SM01259 10 81 4.3E-42 T 15-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 THII_1226 c9288a13444528a77f05dde3b480723f 97 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 10 79 4.3E-32 T 15-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 THII_1358 478d0652297e7c5799c8c930be43a9ee 83 SUPERFAMILY SSF46689 9 74 1.52E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_1358 478d0652297e7c5799c8c930be43a9ee 83 Pfam PF04255 Protein of unknown function (DUF433) 14 69 9.5E-24 T 15-10-2018 IPR007367 Protein of unknown function DUF433 THII_1358 478d0652297e7c5799c8c930be43a9ee 83 Gene3D G3DSA:1.10.10.10 13 75 3.6E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3522 479acd0d0062532e9562183a274dbdd2 192 Gene3D G3DSA:3.60.20.10 2 188 6.6E-25 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_3522 479acd0d0062532e9562183a274dbdd2 192 SUPERFAMILY SSF56235 1 187 1.55E-22 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_3522 479acd0d0062532e9562183a274dbdd2 192 Pfam PF00227 Proteasome subunit 2 163 3.4E-5 T 15-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 THII_3804 db81cbfd7ca8f5d6b132241c2552c5bc 134 Pfam PF01850 PIN domain 6 125 1.3E-14 T 15-10-2018 IPR002716 PIN domain THII_3804 db81cbfd7ca8f5d6b132241c2552c5bc 134 Gene3D G3DSA:3.40.50.1010 4 134 3.5E-12 T 15-10-2018 THII_3804 db81cbfd7ca8f5d6b132241c2552c5bc 134 SUPERFAMILY SSF88723 3 127 1.21E-19 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_0065 19570c98f86fa33e60daef2a43cd1662 287 Gene3D G3DSA:1.25.40.10 115 199 1.2E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0065 19570c98f86fa33e60daef2a43cd1662 287 Pfam PF14561 Tetratricopeptide repeat 200 287 1.5E-28 T 15-10-2018 THII_0065 19570c98f86fa33e60daef2a43cd1662 287 PRINTS PR00421 Thioredoxin family signature 36 45 3.1E-7 T 15-10-2018 THII_0065 19570c98f86fa33e60daef2a43cd1662 287 PRINTS PR00421 Thioredoxin family signature 76 87 3.1E-7 T 15-10-2018 THII_0065 19570c98f86fa33e60daef2a43cd1662 287 PRINTS PR00421 Thioredoxin family signature 28 36 3.1E-7 T 15-10-2018 THII_0065 19570c98f86fa33e60daef2a43cd1662 287 SUPERFAMILY SSF48452 118 249 9.22E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0065 19570c98f86fa33e60daef2a43cd1662 287 SUPERFAMILY SSF52833 5 118 5.68E-36 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_0065 19570c98f86fa33e60daef2a43cd1662 287 Gene3D G3DSA:1.25.40.10 200 287 3.3E-28 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0065 19570c98f86fa33e60daef2a43cd1662 287 Pfam PF14559 Tetratricopeptide repeat 129 193 9.2E-10 T 15-10-2018 THII_0065 19570c98f86fa33e60daef2a43cd1662 287 Gene3D G3DSA:3.40.30.10 6 114 5.5E-33 T 15-10-2018 THII_0065 19570c98f86fa33e60daef2a43cd1662 287 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 THII_0065 19570c98f86fa33e60daef2a43cd1662 287 Pfam PF00085 Thioredoxin 8 111 4.5E-30 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 THII_0065 19570c98f86fa33e60daef2a43cd1662 287 TIGRFAM TIGR01068 thioredoxin: thioredoxin 13 111 7.1E-33 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 THII_3436 1f015abdf1167fdfb108d5e90ae4961f 104 Pfam PF02641 Uncharacterized ACR, COG1993 6 96 1.1E-19 T 15-10-2018 IPR003793 Domain of unknown function DUF190 THII_3436 1f015abdf1167fdfb108d5e90ae4961f 104 Gene3D G3DSA:3.30.70.120 2 103 2.5E-21 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THII_3436 1f015abdf1167fdfb108d5e90ae4961f 104 SUPERFAMILY SSF54913 4 97 1.67E-21 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta THII_3941 f45b1c185f9aacebfbbb17d12c5bf80f 404 SUPERFAMILY SSF52402 5 208 6.4E-51 T 15-10-2018 THII_3941 f45b1c185f9aacebfbbb17d12c5bf80f 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 THII_3941 f45b1c185f9aacebfbbb17d12c5bf80f 404 Pfam PF00764 Arginosuccinate synthase 8 398 9.0E-157 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 THII_3941 f45b1c185f9aacebfbbb17d12c5bf80f 404 Gene3D G3DSA:3.40.50.620 5 174 3.2E-71 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3941 f45b1c185f9aacebfbbb17d12c5bf80f 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 403 52.277 T 15-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 THII_3941 f45b1c185f9aacebfbbb17d12c5bf80f 404 Gene3D G3DSA:3.90.1260.10 178 404 4.7E-98 T 15-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 THII_3941 f45b1c185f9aacebfbbb17d12c5bf80f 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 THII_3941 f45b1c185f9aacebfbbb17d12c5bf80f 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 399 3.9E-139 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 THII_3941 f45b1c185f9aacebfbbb17d12c5bf80f 404 SUPERFAMILY SSF69864 177 401 8.76E-94 T 15-10-2018 THII_0459 4ff3c565116528c56bf34c478d1c0f73 1150 Pfam PF07610 Protein of unknown function (DUF1573) 335 430 5.7E-7 T 15-10-2018 IPR011467 Protein of unknown function DUF1573 THII_0459 4ff3c565116528c56bf34c478d1c0f73 1150 Gene3D G3DSA:2.60.40.10 332 434 2.0E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0459 4ff3c565116528c56bf34c478d1c0f73 1150 SUPERFAMILY SSF55486 758 821 2.4E-6 T 15-10-2018 THII_2170 3252205a9743a16d80eb4ff96058dad5 127 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 120 9.8E-21 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 THII_2170 3252205a9743a16d80eb4ff96058dad5 127 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 25.189 T 15-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 THII_2170 3252205a9743a16d80eb4ff96058dad5 127 Gene3D G3DSA:3.90.470.20 1 126 4.4E-38 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 THII_2170 3252205a9743a16d80eb4ff96058dad5 127 SUPERFAMILY SSF56214 1 124 8.11E-30 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 THII_2170 3252205a9743a16d80eb4ff96058dad5 127 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 125 2.9E-29 T 15-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 THII_2170 3252205a9743a16d80eb4ff96058dad5 127 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 124 4.0E-21 T 15-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 THII_2170 3252205a9743a16d80eb4ff96058dad5 127 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 126 3.2E-33 T 15-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 THII_2519 7170b994fc28d94d01a9026550352333 135 PIRSF PIRSF029598 6 133 1.3E-32 T 15-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 THII_2519 7170b994fc28d94d01a9026550352333 135 Pfam PF06146 Phosphate-starvation-inducible E 54 120 2.0E-15 T 15-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like THII_1963 d4e0fde0c66bf70a4092654619de9e03 437 Gene3D G3DSA:1.10.4030.10 25 151 2.0E-32 T 15-10-2018 THII_1963 d4e0fde0c66bf70a4092654619de9e03 437 Pfam PF09312 SurA N-terminal domain 28 145 2.2E-34 T 15-10-2018 IPR015391 SurA N-terminal THII_1963 d4e0fde0c66bf70a4092654619de9e03 437 Hamap MF_01183 Chaperone SurA [surA]. 4 430 33.148 T 15-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 THII_1963 d4e0fde0c66bf70a4092654619de9e03 437 SUPERFAMILY SSF109998 29 205 7.26E-39 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily THII_1963 d4e0fde0c66bf70a4092654619de9e03 437 SUPERFAMILY SSF54534 287 386 1.18E-29 T 15-10-2018 THII_1963 d4e0fde0c66bf70a4092654619de9e03 437 SUPERFAMILY SSF54534 177 279 4.12E-25 T 15-10-2018 THII_1963 d4e0fde0c66bf70a4092654619de9e03 437 Gene3D G3DSA:3.10.50.40 286 387 5.4E-77 T 15-10-2018 THII_1963 d4e0fde0c66bf70a4092654619de9e03 437 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 323 344 - T 15-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 THII_1963 d4e0fde0c66bf70a4092654619de9e03 437 Gene3D G3DSA:3.10.50.40 179 388 5.4E-77 T 15-10-2018 THII_1963 d4e0fde0c66bf70a4092654619de9e03 437 Pfam PF00639 PPIC-type PPIASE domain 182 275 4.7E-21 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 THII_1963 d4e0fde0c66bf70a4092654619de9e03 437 Pfam PF00639 PPIC-type PPIASE domain 292 382 6.6E-26 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 THII_2134 240987ff40f59dc9425910ee107e1fcc 187 Gene3D G3DSA:3.90.1570.10 3 185 1.2E-16 T 15-10-2018 THII_2134 240987ff40f59dc9425910ee107e1fcc 187 Pfam PF05685 Putative restriction endonuclease 13 178 2.5E-32 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2134 240987ff40f59dc9425910ee107e1fcc 187 SUPERFAMILY SSF52980 4 165 6.97E-23 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 SUPERFAMILY SSF51419 67 344 4.91E-65 T 15-10-2018 IPR029066 PLP-binding barrel THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 Gene3D G3DSA:3.20.20.10 67 347 8.4E-229 T 15-10-2018 IPR029066 PLP-binding barrel THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 TIGRFAM TIGR01273 speA: arginine decarboxylase 6 630 3.9E-248 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 98 116 - T 15-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PIRSF PIRSF001336 1 631 7.9E-242 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 Gene3D G3DSA:2.40.37.10 15 567 8.4E-229 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 SUPERFAMILY SSF50621 456 558 7.67E-5 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 Gene3D G3DSA:1.20.58.930 365 458 8.4E-229 T 15-10-2018 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01180 Arginine decarboxylase signature 145 160 5.4E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01180 Arginine decarboxylase signature 90 104 5.4E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01180 Arginine decarboxylase signature 462 483 5.4E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01180 Arginine decarboxylase signature 195 217 5.4E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01180 Arginine decarboxylase signature 540 561 5.4E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01180 Arginine decarboxylase signature 487 512 5.4E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01180 Arginine decarboxylase signature 171 192 5.4E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01180 Arginine decarboxylase signature 322 339 5.4E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01180 Arginine decarboxylase signature 66 81 5.4E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 4 631 41.043 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 332 351 5.2E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 5.2E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 238 251 5.2E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 540 553 5.2E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 121 133 5.2E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_3186 4afed56298ff1c6457c7d04fe26c19f8 631 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 75 342 3.2E-52 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 THII_3410 10280005f4ed6854ce7d56178eb8ed08 144 PIRSF PIRSF004638 1 144 1.2E-51 T 15-10-2018 IPR005265 Uncharacterised protein family UPF0093 THII_3410 10280005f4ed6854ce7d56178eb8ed08 144 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 144 1.9E-48 T 15-10-2018 IPR005265 Uncharacterised protein family UPF0093 THII_0571 f3e05660c730778ef454743730d90f66 87 SUPERFAMILY SSF143011 1 83 4.84E-29 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_0571 f3e05660c730778ef454743730d90f66 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 2.0E-38 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_0571 f3e05660c730778ef454743730d90f66 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 4.7E-42 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_0571 f3e05660c730778ef454743730d90f66 87 Gene3D G3DSA:3.30.2310.20 1 84 2.3E-41 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_3392 1dd286b6df482c049a94d0a69cd74e67 271 Pfam PF01436 NHL repeat 48 74 5.8E-9 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_3392 1dd286b6df482c049a94d0a69cd74e67 271 Pfam PF01436 NHL repeat 103 129 3.5E-7 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_3392 1dd286b6df482c049a94d0a69cd74e67 271 Gene3D G3DSA:2.120.10.30 73 171 2.1E-30 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_3392 1dd286b6df482c049a94d0a69cd74e67 271 Gene3D G3DSA:2.120.10.30 13 72 1.8E-15 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_3392 1dd286b6df482c049a94d0a69cd74e67 271 SUPERFAMILY SSF101898 48 179 6.02E-19 T 15-10-2018 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 Pfam PF07719 Tetratricopeptide repeat 31 61 1.5E-5 T 15-10-2018 IPR013105 Tetratricopeptide repeat 2 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 Gene3D G3DSA:1.25.40.10 103 166 8.2E-21 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 Gene3D G3DSA:1.25.40.10 21 102 1.8E-23 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 Gene3D G3DSA:3.40.50.11380 337 691 7.6E-130 T 15-10-2018 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 Gene3D G3DSA:3.40.50.2000 502 684 7.6E-130 T 15-10-2018 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 SUPERFAMILY SSF53756 349 699 1.54E-5 T 15-10-2018 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 SUPERFAMILY SSF48452 26 106 2.85E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 Pfam PF13844 Glycosyl transferase family 41 348 493 8.5E-29 T 15-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 Pfam PF13844 Glycosyl transferase family 41 515 702 1.6E-32 T 15-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 SMART SM00028 233 266 1.3E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 SMART SM00028 29 62 0.0087 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 SMART SM00028 97 130 3.6E-8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 SMART SM00028 131 164 4.7E-8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 SMART SM00028 165 198 0.49 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 SMART SM00028 63 96 9.6E-9 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 SMART SM00028 199 232 5.9E-8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 Pfam PF13414 TPR repeat 72 110 7.8E-13 T 15-10-2018 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 Pfam PF13414 TPR repeat 206 247 5.8E-11 T 15-10-2018 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 Pfam PF13424 Tetratricopeptide repeat 130 194 7.1E-11 T 15-10-2018 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 SUPERFAMILY SSF48439 81 297 4.32E-44 T 15-10-2018 THII_0705 26f80e354f0f37dba7c98bff0d8e3656 715 Gene3D G3DSA:1.25.40.10 167 322 1.4E-33 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0541 4783e1a73b40bd21af348dbe0f742ff7 177 SMART SM00388 20 87 1.2 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0541 4783e1a73b40bd21af348dbe0f742ff7 177 SMART SM00388 92 160 2.4E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0541 4783e1a73b40bd21af348dbe0f742ff7 177 Gene3D G3DSA:1.10.287.130 88 158 6.7E-14 T 15-10-2018 THII_0541 4783e1a73b40bd21af348dbe0f742ff7 177 Pfam PF00512 His Kinase A (phospho-acceptor) domain 93 158 2.0E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0541 4783e1a73b40bd21af348dbe0f742ff7 177 SUPERFAMILY SSF47384 93 158 1.06E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2217 68be323b56b8a21cb8ef95b0a2419084 422 Gene3D G3DSA:3.40.47.10 1 267 1.1E-50 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2217 68be323b56b8a21cb8ef95b0a2419084 422 SUPERFAMILY SSF53901 3 264 1.54E-37 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2217 68be323b56b8a21cb8ef95b0a2419084 422 Gene3D G3DSA:3.40.47.10 276 421 3.3E-39 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2217 68be323b56b8a21cb8ef95b0a2419084 422 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 258 1.9E-23 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2217 68be323b56b8a21cb8ef95b0a2419084 422 SMART SM00825 Beta-ketoacyl synthase 5 422 5.0E-9 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2217 68be323b56b8a21cb8ef95b0a2419084 422 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 281 380 3.1E-29 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2217 68be323b56b8a21cb8ef95b0a2419084 422 SUPERFAMILY SSF53901 229 419 1.32E-48 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_3350 9563933c7033c53fca50391458bf157a 432 Pfam PF12867 DinB superfamily 25 160 1.1E-10 T 15-10-2018 IPR024775 DinB-like domain THII_3350 9563933c7033c53fca50391458bf157a 432 Pfam PF03781 Sulfatase-modifying factor enzyme 1 349 429 1.4E-9 T 15-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 THII_3350 9563933c7033c53fca50391458bf157a 432 Pfam PF03781 Sulfatase-modifying factor enzyme 1 195 329 3.0E-25 T 15-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 THII_3350 9563933c7033c53fca50391458bf157a 432 SUPERFAMILY SSF56436 192 431 1.08E-72 T 15-10-2018 IPR016187 C-type lectin fold THII_3350 9563933c7033c53fca50391458bf157a 432 Gene3D G3DSA:3.90.1580.10 184 341 4.8E-30 T 15-10-2018 THII_3350 9563933c7033c53fca50391458bf157a 432 Gene3D G3DSA:3.90.1580.10 343 432 3.1E-12 T 15-10-2018 THII_3350 9563933c7033c53fca50391458bf157a 432 SUPERFAMILY SSF109854 22 157 7.33E-8 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes THII_3350 9563933c7033c53fca50391458bf157a 432 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 23 429 2.1E-168 T 15-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 THII_3289 ca59a13dcb02b71f04fad0abeb7285d4 617 Gene3D G3DSA:3.30.1920.30 225 287 8.4E-100 T 15-10-2018 THII_3289 ca59a13dcb02b71f04fad0abeb7285d4 617 SUPERFAMILY SSF69255 354 442 6.28E-33 T 15-10-2018 THII_3289 ca59a13dcb02b71f04fad0abeb7285d4 617 Gene3D G3DSA:2.40.50.230 345 447 4.4E-44 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily THII_3289 ca59a13dcb02b71f04fad0abeb7285d4 617 Pfam PF05954 Phage late control gene D protein (GPD) 32 328 8.3E-82 T 15-10-2018 THII_3289 ca59a13dcb02b71f04fad0abeb7285d4 617 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 13 512 3.6E-181 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset THII_3289 ca59a13dcb02b71f04fad0abeb7285d4 617 SUPERFAMILY SSF69279 199 354 2.13E-27 T 15-10-2018 THII_3289 ca59a13dcb02b71f04fad0abeb7285d4 617 Gene3D G3DSA:2.30.110.50 17 330 8.4E-100 T 15-10-2018 THII_3289 ca59a13dcb02b71f04fad0abeb7285d4 617 SUPERFAMILY SSF69279 14 186 1.28E-55 T 15-10-2018 THII_3289 ca59a13dcb02b71f04fad0abeb7285d4 617 Gene3D G3DSA:3.55.50.10 101 190 8.4E-100 T 15-10-2018 THII_3289 ca59a13dcb02b71f04fad0abeb7285d4 617 SUPERFAMILY SSF69349 432 617 4.71E-38 T 15-10-2018 THII_3289 ca59a13dcb02b71f04fad0abeb7285d4 617 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 28 494 1.9E-130 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein THII_2403 eea204931baa23f61025802825298d00 482 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 257 267 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site THII_2403 eea204931baa23f61025802825298d00 482 PRINTS PR00723 Subtilisin serine protease family (S8) signature 253 266 2.6E-17 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_2403 eea204931baa23f61025802825298d00 482 PRINTS PR00723 Subtilisin serine protease family (S8) signature 214 233 2.6E-17 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_2403 eea204931baa23f61025802825298d00 482 PRINTS PR00723 Subtilisin serine protease family (S8) signature 408 424 2.6E-17 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_2403 eea204931baa23f61025802825298d00 482 Gene3D G3DSA:3.40.50.200 183 472 1.1E-95 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_2403 eea204931baa23f61025802825298d00 482 SUPERFAMILY SSF52743 197 475 1.1E-85 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_2403 eea204931baa23f61025802825298d00 482 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 409 419 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site THII_2403 eea204931baa23f61025802825298d00 482 Pfam PF00082 Subtilase family 217 462 1.6E-46 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 THII_1321 f3adfdcb46e0f569b0abee2b21798765 239 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_1321 f3adfdcb46e0f569b0abee2b21798765 239 Gene3D G3DSA:3.40.50.300 1 238 9.9E-47 T 15-10-2018 THII_1321 f3adfdcb46e0f569b0abee2b21798765 239 SMART SM00382 28 207 2.8E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1321 f3adfdcb46e0f569b0abee2b21798765 239 SUPERFAMILY SSF52540 3 223 3.51E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1321 f3adfdcb46e0f569b0abee2b21798765 239 Pfam PF00005 ABC transporter 19 159 3.2E-18 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_1736 0bb1d02e81079e9c086f7b4bb2b23491 149 Pfam PF07977 FabA-like domain 13 138 1.4E-38 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 THII_1736 0bb1d02e81079e9c086f7b4bb2b23491 149 Gene3D G3DSA:3.10.129.10 1 147 1.1E-57 T 15-10-2018 THII_1736 0bb1d02e81079e9c086f7b4bb2b23491 149 SUPERFAMILY SSF54637 2 143 4.21E-48 T 15-10-2018 IPR029069 HotDog domain superfamily THII_1736 0bb1d02e81079e9c086f7b4bb2b23491 149 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 4 146 34.139 T 15-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 THII_1736 0bb1d02e81079e9c086f7b4bb2b23491 149 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 4 143 6.3E-58 T 15-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 Gene3D G3DSA:2.40.30.170 314 361 8.9E-11 T 15-10-2018 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 16 429 6.5E-127 T 15-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 Gene3D G3DSA:1.10.287.470 89 163 3.7E-9 T 15-10-2018 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 Pfam PF13437 HlyD family secretion protein 281 386 2.2E-14 T 15-10-2018 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 Gene3D G3DSA:1.10.287.470 169 245 8.9E-11 T 15-10-2018 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 Pfam PF13533 Biotin-lipoyl like 63 92 1.2E-8 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 350 373 1.4E-41 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 293 314 1.4E-41 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 24 47 1.4E-41 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 326 350 1.4E-41 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 393 408 1.4E-41 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 408 428 1.4E-41 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 66 86 1.4E-41 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 Gene3D G3DSA:2.40.50.100 246 313 8.9E-11 T 15-10-2018 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 SUPERFAMILY SSF111369 46 112 1.44E-5 T 15-10-2018 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 ProSitePatterns PS00543 HlyD family secretion proteins signature. 393 415 - T 15-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 Gene3D G3DSA:2.40.50.100 53 168 3.7E-9 T 15-10-2018 THII_0049 ed3c16bce8a2a0dd7a5aeec73e240976 429 SUPERFAMILY SSF56954 139 232 6.54E-5 T 15-10-2018 THII_2664 5ef66d6faf2f30e3cb9b279cdea89840 291 SUPERFAMILY SSF53474 5 279 8.87E-51 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_2664 5ef66d6faf2f30e3cb9b279cdea89840 291 Gene3D G3DSA:3.40.50.1820 7 287 9.2E-81 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_2664 5ef66d6faf2f30e3cb9b279cdea89840 291 Pfam PF00561 alpha/beta hydrolase fold 36 271 4.1E-21 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_2664 5ef66d6faf2f30e3cb9b279cdea89840 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 76 2.7E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_2664 5ef66d6faf2f30e3cb9b279cdea89840 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 2.7E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_1003 7683bd4d29a6a454076f0e1ab302b7c5 375 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 20 370 1.4E-87 T 15-10-2018 IPR017740 Type VI secretion system-associated, ImpA THII_1003 7683bd4d29a6a454076f0e1ab302b7c5 375 Pfam PF06812 ImpA, N-terminal, type VI secretion system 23 147 1.5E-37 T 15-10-2018 IPR010657 ImpA, N-terminal THII_1202 86398d21b84bc03c97e05cecf60996e3 529 Gene3D G3DSA:3.90.1580.10 294 529 5.2E-61 T 15-10-2018 THII_1202 86398d21b84bc03c97e05cecf60996e3 529 SUPERFAMILY SSF56436 304 527 8.01E-66 T 15-10-2018 IPR016187 C-type lectin fold THII_1202 86398d21b84bc03c97e05cecf60996e3 529 Pfam PF03781 Sulfatase-modifying factor enzyme 1 302 527 4.3E-56 T 15-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 THII_1220 5737793deb2a26d48837db1acb1ce82e 214 Gene3D G3DSA:3.30.2320.30 84 204 6.5E-15 T 15-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_1220 5737793deb2a26d48837db1acb1ce82e 214 Pfam PF01991 ATP synthase (E/31 kDa) subunit 14 204 1.7E-18 T 15-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_1220 5737793deb2a26d48837db1acb1ce82e 214 SUPERFAMILY SSF160527 85 204 3.01E-13 T 15-10-2018 THII_3036 597a4f91b25e174badd7d78a943f1227 876 SMART SM01080 32 429 2.7E-26 T 15-10-2018 IPR007890 CHASE2 THII_3036 597a4f91b25e174badd7d78a943f1227 876 Gene3D G3DSA:1.10.510.10 692 875 6.4E-45 T 15-10-2018 THII_3036 597a4f91b25e174badd7d78a943f1227 876 Pfam PF05226 CHASE2 domain 21 424 1.5E-34 T 15-10-2018 IPR007890 CHASE2 THII_3036 597a4f91b25e174badd7d78a943f1227 876 SUPERFAMILY SSF56112 599 864 1.75E-73 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_3036 597a4f91b25e174badd7d78a943f1227 876 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 730 742 - T 15-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 THII_3036 597a4f91b25e174badd7d78a943f1227 876 SUPERFAMILY SSF48452 480 572 2.32E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3036 597a4f91b25e174badd7d78a943f1227 876 Gene3D G3DSA:1.25.40.10 477 602 2.7E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3036 597a4f91b25e174badd7d78a943f1227 876 Pfam PF00069 Protein kinase domain 607 858 2.4E-51 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_3036 597a4f91b25e174badd7d78a943f1227 876 SMART SM00220 607 867 5.3E-59 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_3036 597a4f91b25e174badd7d78a943f1227 876 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 613 636 - T 15-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 THII_3036 597a4f91b25e174badd7d78a943f1227 876 Gene3D G3DSA:3.30.200.20 603 690 4.1E-26 T 15-10-2018 THII_0677 01d4904adabb25095caaa0efbc8a3ee5 416 Gene3D G3DSA:3.20.20.10 21 276 6.8E-102 T 15-10-2018 IPR029066 PLP-binding barrel THII_0677 01d4904adabb25095caaa0efbc8a3ee5 416 SUPERFAMILY SSF50621 250 394 2.3E-33 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 THII_0677 01d4904adabb25095caaa0efbc8a3ee5 416 SUPERFAMILY SSF51419 13 276 4.65E-59 T 15-10-2018 IPR029066 PLP-binding barrel THII_0677 01d4904adabb25095caaa0efbc8a3ee5 416 Gene3D G3DSA:2.40.37.10 9 397 6.8E-102 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 THII_0677 01d4904adabb25095caaa0efbc8a3ee5 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 275 372 1.1E-15 T 15-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 THII_0677 01d4904adabb25095caaa0efbc8a3ee5 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 23 274 8.6E-36 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 THII_0677 01d4904adabb25095caaa0efbc8a3ee5 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 43 61 3.6E-6 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_0677 01d4904adabb25095caaa0efbc8a3ee5 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 75 3.6E-6 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_0677 01d4904adabb25095caaa0efbc8a3ee5 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 264 283 3.6E-6 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 THII_0759 bd26874c1918dc2ae8f4cbc4edf46012 283 Gene3D G3DSA:3.40.50.300 32 263 2.7E-16 T 15-10-2018 THII_0759 bd26874c1918dc2ae8f4cbc4edf46012 283 SUPERFAMILY SSF52540 32 244 1.92E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2431 09f5ff0838267c879560f8a7d325c7c4 196 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 15 195 36.96 T 15-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 THII_2431 09f5ff0838267c879560f8a7d325c7c4 196 Pfam PF01300 Telomere recombination 25 192 3.8E-39 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 THII_2431 09f5ff0838267c879560f8a7d325c7c4 196 SUPERFAMILY SSF55821 12 195 5.49E-50 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THII_2431 09f5ff0838267c879560f8a7d325c7c4 196 Gene3D G3DSA:3.90.870.10 11 195 8.8E-52 T 15-10-2018 THII_0875 4f8e544f2150c42dadc288933ef1f220 302 PIRSF PIRSF037167 1 302 4.8E-135 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 THII_0875 4f8e544f2150c42dadc288933ef1f220 302 Gene3D G3DSA:1.10.8.10 10 97 1.3E-6 T 15-10-2018 THII_0875 4f8e544f2150c42dadc288933ef1f220 302 Pfam PF05175 Methyltransferase small domain 129 213 2.4E-16 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 THII_0875 4f8e544f2150c42dadc288933ef1f220 302 Gene3D G3DSA:3.40.50.150 98 277 7.6E-47 T 15-10-2018 THII_0875 4f8e544f2150c42dadc288933ef1f220 302 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 1 297 50.212 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 THII_0875 4f8e544f2150c42dadc288933ef1f220 302 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 201 207 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 THII_0875 4f8e544f2150c42dadc288933ef1f220 302 SUPERFAMILY SSF53335 11 290 1.23E-49 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0875 4f8e544f2150c42dadc288933ef1f220 302 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 297 3.1E-81 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 THII_0875 4f8e544f2150c42dadc288933ef1f220 302 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 8 291 3.5E-129 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SUPERFAMILY SSF141072 718 816 1.83E-20 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Gene3D G3DSA:3.80.10.10 1344 1500 1.1E-42 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Gene3D G3DSA:2.60.40.2030 718 843 1.1E-21 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00237 711 808 8.5E-18 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Pfam PF03160 Calx-beta domain 721 807 8.0E-15 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Pfam PF01436 NHL repeat 158 184 5.7E-7 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Pfam PF01436 NHL repeat 324 350 1.2E-5 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Pfam PF01436 NHL repeat 213 239 2.9E-4 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Pfam PF01436 NHL repeat 103 129 4.0E-5 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Pfam PF01436 NHL repeat 48 74 1.9E-6 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Gene3D G3DSA:3.80.10.10 1183 1343 1.7E-49 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Gene3D G3DSA:2.60.40.10 1527 1632 1.2E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00369 1277 1301 25.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00369 1469 1493 220.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00369 1397 1420 25.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00369 1421 1444 290.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00369 1445 1468 54.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00369 1373 1396 60.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00369 1325 1349 36.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SUPERFAMILY SSF101898 103 361 9.16E-37 T 15-10-2018 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00135 316 358 4.0 T 15-10-2018 IPR000033 LDLR class B repeat THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00135 260 303 90.0 T 15-10-2018 IPR000033 LDLR class B repeat THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00135 40 82 11.0 T 15-10-2018 IPR000033 LDLR class B repeat THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00135 151 192 4.8 T 15-10-2018 IPR000033 LDLR class B repeat THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00135 96 137 11.0 T 15-10-2018 IPR000033 LDLR class B repeat THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00135 206 247 17.0 T 15-10-2018 IPR000033 LDLR class B repeat THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SUPERFAMILY SSF52058 1219 1486 3.4E-63 T 15-10-2018 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00365 1277 1303 310.0 T 15-10-2018 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00365 1445 1471 13.0 T 15-10-2018 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00365 1229 1255 570.0 T 15-10-2018 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00365 1373 1399 63.0 T 15-10-2018 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 SMART SM00365 1325 1351 78.0 T 15-10-2018 THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Gene3D G3DSA:2.120.10.30 128 237 1.0E-38 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Gene3D G3DSA:2.120.10.30 238 352 8.8E-37 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Gene3D G3DSA:2.120.10.30 18 127 1.7E-35 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Gene3D G3DSA:2.60.40.10 1026 1131 3.5E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1752 0052aae0ffd0de6720e9161eb4ee7955 1632 Gene3D G3DSA:2.60.40.2700 357 455 4.5E-9 T 15-10-2018 THII_3599 9c024ee691076aeea0c3fca035715209 74 SUPERFAMILY SSF46689 3 68 1.97E-23 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3599 9c024ee691076aeea0c3fca035715209 74 Pfam PF04255 Protein of unknown function (DUF433) 7 62 1.5E-25 T 15-10-2018 IPR007367 Protein of unknown function DUF433 THII_3599 9c024ee691076aeea0c3fca035715209 74 Gene3D G3DSA:1.10.10.10 6 72 2.0E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1555 4b54e9a42524390c69bbd78538f93902 856 Pfam PF03160 Calx-beta domain 400 478 3.1E-13 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1555 4b54e9a42524390c69bbd78538f93902 856 Gene3D G3DSA:2.60.40.2700 23 122 4.0E-8 T 15-10-2018 THII_1555 4b54e9a42524390c69bbd78538f93902 856 SMART SM00237 389 491 2.8E-11 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1555 4b54e9a42524390c69bbd78538f93902 856 SUPERFAMILY SSF141072 396 498 1.57E-18 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1555 4b54e9a42524390c69bbd78538f93902 856 Gene3D G3DSA:2.60.40.2030 396 511 1.4E-19 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_2494 b1dd8e221da5c2567202d54efc9d1d05 275 ProSitePatterns PS00761 Signal peptidases I signature 3. 223 236 - T 15-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 THII_2494 b1dd8e221da5c2567202d54efc9d1d05 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 140 152 9.2E-24 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 THII_2494 b1dd8e221da5c2567202d54efc9d1d05 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 76 92 9.2E-24 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 THII_2494 b1dd8e221da5c2567202d54efc9d1d05 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 218 237 9.2E-24 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 THII_2494 b1dd8e221da5c2567202d54efc9d1d05 275 Gene3D G3DSA:2.170.230.10 151 217 4.2E-70 T 15-10-2018 THII_2494 b1dd8e221da5c2567202d54efc9d1d05 275 SUPERFAMILY SSF51306 74 273 4.71E-68 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily THII_2494 b1dd8e221da5c2567202d54efc9d1d05 275 Gene3D G3DSA:2.10.109.10 74 258 4.2E-70 T 15-10-2018 THII_2494 b1dd8e221da5c2567202d54efc9d1d05 275 ProSitePatterns PS00760 Signal peptidases I lysine active site. 142 154 - T 15-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 THII_2494 b1dd8e221da5c2567202d54efc9d1d05 275 ProSitePatterns PS00501 Signal peptidases I serine active site. 85 92 - T 15-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 THII_2494 b1dd8e221da5c2567202d54efc9d1d05 275 Pfam PF00717 Peptidase S24-like 82 166 5.5E-24 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C THII_2494 b1dd8e221da5c2567202d54efc9d1d05 275 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 62 257 4.2E-49 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 329 2.5E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 2.5E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 351 2.5E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 315 2.5E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 Pfam PF00072 Response regulator receiver domain 12 122 3.4E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 SUPERFAMILY SSF47384 131 218 1.08E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 SMART SM00387 263 372 1.6E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 267 371 3.6E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 Gene3D G3DSA:3.40.50.2300 3 138 2.1E-37 T 15-10-2018 THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 SUPERFAMILY SSF55874 227 370 1.7E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 Pfam PF00512 His Kinase A (phospho-acceptor) domain 149 215 1.7E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 Gene3D G3DSA:3.30.565.10 224 372 7.6E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 SMART SM00448 9 122 1.4E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 SMART SM00388 148 220 2.7E-5 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 SUPERFAMILY SSF52172 10 151 2.7E-40 T 15-10-2018 IPR011006 CheY-like superfamily THII_0354 13567e2b8d16a122bfccd2eb232ab8ee 372 Gene3D G3DSA:1.10.287.130 139 223 7.0E-12 T 15-10-2018 THII_0573 727c710ccfd2a329f024c56ca988c305 249 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 4 45 4.9E-9 T 15-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal THII_0573 727c710ccfd2a329f024c56ca988c305 249 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 159 1.1E-7 T 15-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 THII_1917 f58a0e78d724d05c9f338bb040bafe0f 557 Pfam PF00005 ABC transporter 22 193 2.6E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_1917 f58a0e78d724d05c9f338bb040bafe0f 557 Pfam PF00005 ABC transporter 342 475 3.9E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_1917 f58a0e78d724d05c9f338bb040bafe0f 557 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_1917 f58a0e78d724d05c9f338bb040bafe0f 557 Pfam PF12848 ABC transporter 232 307 5.7E-12 T 15-10-2018 IPR032781 ABC-transporter extension domain THII_1917 f58a0e78d724d05c9f338bb040bafe0f 557 Gene3D G3DSA:3.40.50.300 1 287 9.5E-82 T 15-10-2018 THII_1917 f58a0e78d724d05c9f338bb040bafe0f 557 SMART SM00382 350 526 6.4E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1917 f58a0e78d724d05c9f338bb040bafe0f 557 SMART SM00382 31 238 7.4E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1917 f58a0e78d724d05c9f338bb040bafe0f 557 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 555 4.4E-301 T 15-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 THII_1917 f58a0e78d724d05c9f338bb040bafe0f 557 SUPERFAMILY SSF52540 17 245 5.9E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1917 f58a0e78d724d05c9f338bb040bafe0f 557 Gene3D G3DSA:3.40.50.300 288 557 1.7E-70 T 15-10-2018 THII_1917 f58a0e78d724d05c9f338bb040bafe0f 557 SUPERFAMILY SSF52540 305 522 7.86E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0276 d1e7b034627cbbefed2be7a006ccd4dc 755 Pfam PF03415 Clostripain family 162 509 4.0E-32 T 15-10-2018 IPR005077 Peptidase C11, clostripain THII_0276 d1e7b034627cbbefed2be7a006ccd4dc 755 Gene3D G3DSA:3.40.50.11970 127 248 4.9E-8 T 15-10-2018 THII_2277 d4c1e48b16e7864138d238d4bedcbd9f 424 Gene3D G3DSA:3.50.50.60 291 363 6.8E-6 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2277 d4c1e48b16e7864138d238d4bedcbd9f 424 Gene3D G3DSA:3.50.50.60 364 413 6.8E-6 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2277 d4c1e48b16e7864138d238d4bedcbd9f 424 SUPERFAMILY SSF51905 7 416 1.94E-25 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2277 d4c1e48b16e7864138d238d4bedcbd9f 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 329 5.2E-5 T 15-10-2018 THII_2277 d4c1e48b16e7864138d238d4bedcbd9f 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 5.2E-5 T 15-10-2018 THII_2277 d4c1e48b16e7864138d238d4bedcbd9f 424 Pfam PF12831 FAD dependent oxidoreductase 11 48 2.4E-9 T 15-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal THII_2277 d4c1e48b16e7864138d238d4bedcbd9f 424 Gene3D G3DSA:3.50.50.60 3 111 4.4E-12 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2277 d4c1e48b16e7864138d238d4bedcbd9f 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 3.3E-6 T 15-10-2018 THII_2277 d4c1e48b16e7864138d238d4bedcbd9f 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 367 3.3E-6 T 15-10-2018 THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 SMART SM00671 258 293 2.5E-7 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 SMART SM00671 186 221 2.5E-9 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 SMART SM00671 222 257 2.0E-12 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 SMART SM00671 294 329 3.6E-9 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 SMART SM00671 78 113 3.3E-13 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 SMART SM00671 150 185 4.7E-9 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 SMART SM00671 114 149 6.5E-13 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 SUPERFAMILY SSF81901 215 333 1.05E-33 T 15-10-2018 THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 Gene3D G3DSA:1.25.40.10 184 367 1.6E-62 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 Gene3D G3DSA:1.25.40.10 24 183 4.9E-49 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 Pfam PF08238 Sel1 repeat 114 149 2.5E-10 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 Pfam PF08238 Sel1 repeat 150 185 4.0E-6 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 Pfam PF08238 Sel1 repeat 187 220 1.5E-8 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 Pfam PF08238 Sel1 repeat 78 112 1.9E-12 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 Pfam PF08238 Sel1 repeat 258 292 2.9E-4 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 Pfam PF08238 Sel1 repeat 222 257 1.3E-10 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 Pfam PF08238 Sel1 repeat 294 325 3.2E-8 T 15-10-2018 IPR006597 Sel1-like repeat THII_0030 253f0ef676661f040b2dca4a4e63f51d 368 SUPERFAMILY SSF81901 49 229 4.64E-51 T 15-10-2018 THII_0472 efd241b4fc18a49e1b14e5761dd08ab8 147 Gene3D G3DSA:3.10.20.30 1 72 3.1E-28 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_0472 efd241b4fc18a49e1b14e5761dd08ab8 147 SUPERFAMILY SSF54292 2 75 6.82E-26 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 THII_0472 efd241b4fc18a49e1b14e5761dd08ab8 147 Gene3D G3DSA:1.10.150.120 73 147 1.0E-25 T 15-10-2018 THII_0472 efd241b4fc18a49e1b14e5761dd08ab8 147 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 59 2.1E-8 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 THII_0472 efd241b4fc18a49e1b14e5761dd08ab8 147 Pfam PF01799 [2Fe-2S] binding domain 71 141 6.1E-27 T 15-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 THII_0472 efd241b4fc18a49e1b14e5761dd08ab8 147 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 THII_0472 efd241b4fc18a49e1b14e5761dd08ab8 147 SUPERFAMILY SSF47741 71 146 1.7E-29 T 15-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily THII_3874 a4606e161ef7daf46f08530c866189a4 1786 Gene3D G3DSA:3.80.10.10 439 742 3.3E-7 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_0423 3fc7c1f693508905a15f99cd56eec06b 568 Gene3D G3DSA:3.30.450.90 158 288 3.4E-46 T 15-10-2018 THII_0423 3fc7c1f693508905a15f99cd56eec06b 568 Gene3D G3DSA:3.30.300.160 68 150 2.0E-6 T 15-10-2018 THII_0423 3fc7c1f693508905a15f99cd56eec06b 568 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 44 151 4.3E-15 T 15-10-2018 IPR007831 General secretory system II, protein E, N-terminal THII_0423 3fc7c1f693508905a15f99cd56eec06b 568 Pfam PF00437 Type II/IV secretion system protein 191 455 5.1E-76 T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_0423 3fc7c1f693508905a15f99cd56eec06b 568 SMART SM00382 316 458 3.6E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0423 3fc7c1f693508905a15f99cd56eec06b 568 SUPERFAMILY SSF52540 175 560 5.21E-94 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0423 3fc7c1f693508905a15f99cd56eec06b 568 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_0423 3fc7c1f693508905a15f99cd56eec06b 568 Gene3D G3DSA:3.40.50.300 290 566 1.3E-104 T 15-10-2018 THII_0423 3fc7c1f693508905a15f99cd56eec06b 568 SUPERFAMILY SSF160246 8 150 2.35E-31 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily THII_0244 5c9559595d8c1e58525586a390066c5f 83 Gene3D G3DSA:3.30.920.30 7 67 2.1E-7 T 15-10-2018 IPR038570 HicA superfamily THII_0244 5c9559595d8c1e58525586a390066c5f 83 SUPERFAMILY SSF54786 7 63 3.92E-7 T 15-10-2018 THII_0244 5c9559595d8c1e58525586a390066c5f 83 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 10 62 9.5E-10 T 15-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 THII_0700 a580c630d3ca94862b47dece88943d28 690 SUPERFAMILY SSF82185 48 134 1.96E-23 T 15-10-2018 THII_0700 a580c630d3ca94862b47dece88943d28 690 SMART SM00698 452 473 1.3E-8 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 SMART SM00698 429 450 9.7E-4 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 SMART SM00698 75 96 3.7E-4 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 SMART SM00698 98 119 1.4E-6 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 SMART SM00698 52 73 0.041 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 SMART SM00698 521 542 0.0015 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 SMART SM00698 406 427 0.044 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 SMART SM00698 475 496 5.7E-8 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 SMART SM00698 498 519 0.08 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 Pfam PF02493 MORN repeat 523 542 0.012 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 Pfam PF02493 MORN repeat 500 522 0.01 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 Pfam PF02493 MORN repeat 454 476 2.4E-9 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 Pfam PF02493 MORN repeat 54 76 3.2E-5 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 Pfam PF02493 MORN repeat 477 498 5.9E-8 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 Pfam PF02493 MORN repeat 408 430 0.0011 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 Pfam PF02493 MORN repeat 100 121 7.4E-6 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 Pfam PF02493 MORN repeat 77 99 0.0014 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 Pfam PF02493 MORN repeat 431 453 8.0E-6 T 15-10-2018 IPR003409 MORN motif THII_0700 a580c630d3ca94862b47dece88943d28 690 Gene3D G3DSA:2.20.110.10 48 180 1.4E-17 T 15-10-2018 THII_0700 a580c630d3ca94862b47dece88943d28 690 Gene3D G3DSA:2.20.110.10 457 587 2.7E-22 T 15-10-2018 THII_0700 a580c630d3ca94862b47dece88943d28 690 Gene3D G3DSA:2.20.110.10 391 456 1.4E-11 T 15-10-2018 THII_0700 a580c630d3ca94862b47dece88943d28 690 SUPERFAMILY SSF82185 448 552 7.85E-30 T 15-10-2018 THII_2757 c1abaf70f9adacb246aaf8bda121f3a2 374 Gene3D G3DSA:3.90.870.10 1 205 6.0E-87 T 15-10-2018 THII_2757 c1abaf70f9adacb246aaf8bda121f3a2 374 PIRSF PIRSF001259 1 373 6.1E-128 T 15-10-2018 THII_2757 c1abaf70f9adacb246aaf8bda121f3a2 374 SUPERFAMILY SSF142695 204 367 1.03E-49 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 THII_2757 c1abaf70f9adacb246aaf8bda121f3a2 374 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.873 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_2757 c1abaf70f9adacb246aaf8bda121f3a2 374 Pfam PF00925 GTP cyclohydrolase II 208 367 1.3E-41 T 15-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 THII_2757 c1abaf70f9adacb246aaf8bda121f3a2 374 SUPERFAMILY SSF55821 2 203 3.66E-85 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THII_2757 c1abaf70f9adacb246aaf8bda121f3a2 374 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 197 4.2E-82 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_2757 c1abaf70f9adacb246aaf8bda121f3a2 374 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 9.7E-72 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_2757 c1abaf70f9adacb246aaf8bda121f3a2 374 Gene3D G3DSA:3.40.50.10990 206 368 8.0E-35 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 SUPERFAMILY SSF55979 249 370 8.17E-36 T 15-10-2018 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 PIRSF PIRSF000804 1 370 7.7E-116 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 SUPERFAMILY SSF55979 129 248 2.89E-25 T 15-10-2018 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 SMART SM00480 17 366 4.8E-126 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 Gene3D G3DSA:3.10.150.10 1 125 8.0E-39 T 15-10-2018 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 Gene3D G3DSA:3.10.150.10 253 370 1.6E-37 T 15-10-2018 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 Pfam PF02767 DNA polymerase III beta subunit, central domain 133 247 3.5E-30 T 15-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 SUPERFAMILY SSF55979 1 121 2.33E-24 T 15-10-2018 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 Gene3D G3DSA:3.10.150.10 126 252 6.6E-37 T 15-10-2018 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 122 7.6E-32 T 15-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 370 1.1E-103 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 THII_0729 f288bfd98cb735d2022b7f800ee764f2 370 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 249 369 1.4E-34 T 15-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 THII_1790 e9bda3bda0943a506627d1429da2c502 347 SUPERFAMILY SSF81345 5 340 4.97E-81 T 15-10-2018 IPR037294 ABC transporter, BtuC-like THII_1790 e9bda3bda0943a506627d1429da2c502 347 Pfam PF01032 FecCD transport family 16 339 9.2E-95 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 THII_1790 e9bda3bda0943a506627d1429da2c502 347 Gene3D G3DSA:1.10.3470.10 3 346 4.3E-103 T 15-10-2018 IPR037294 ABC transporter, BtuC-like THII_3779 3673562ea5b0566b42d491026f826f5e 248 SMART SM00855 3 189 1.4E-28 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 THII_3779 3673562ea5b0566b42d491026f826f5e 248 Gene3D G3DSA:3.40.50.1240 1 248 6.0E-93 T 15-10-2018 IPR029033 Histidine phosphatase superfamily THII_3779 3673562ea5b0566b42d491026f826f5e 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 246 1.0E-119 T 15-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 THII_3779 3673562ea5b0566b42d491026f826f5e 248 SUPERFAMILY SSF53254 1 245 2.36E-78 T 15-10-2018 IPR029033 Histidine phosphatase superfamily THII_3779 3673562ea5b0566b42d491026f826f5e 248 PIRSF PIRSF000709 2 246 2.7E-13 T 15-10-2018 THII_3779 3673562ea5b0566b42d491026f826f5e 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.379 T 15-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 THII_3779 3673562ea5b0566b42d491026f826f5e 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 123 1.2E-27 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 THII_3779 3673562ea5b0566b42d491026f826f5e 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 135 209 1.4E-7 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 THII_3779 3673562ea5b0566b42d491026f826f5e 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 THII_3876 16c55c9bec355d2df02b926b2ec670a9 182 Pfam PF05685 Putative restriction endonuclease 20 162 4.2E-15 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3876 16c55c9bec355d2df02b926b2ec670a9 182 Gene3D G3DSA:3.90.1570.10 2 176 1.8E-20 T 15-10-2018 THII_3876 16c55c9bec355d2df02b926b2ec670a9 182 SUPERFAMILY SSF52980 65 174 8.04E-17 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1250 3b28c02ec979d7efb38902f0eb6d6b18 130 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 5 116 5.2E-50 T 15-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 THII_1250 3b28c02ec979d7efb38902f0eb6d6b18 130 Pfam PF14489 QueF-like protein 40 118 9.5E-32 T 15-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 THII_1250 3b28c02ec979d7efb38902f0eb6d6b18 130 SUPERFAMILY SSF55620 5 112 7.19E-27 T 15-10-2018 THII_1250 3b28c02ec979d7efb38902f0eb6d6b18 130 PIRSF PIRSF027377 1 122 1.1E-50 T 15-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 THII_1250 3b28c02ec979d7efb38902f0eb6d6b18 130 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 130 47.111 T 15-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 THII_1250 3b28c02ec979d7efb38902f0eb6d6b18 130 Gene3D G3DSA:3.30.1130.10 2 121 4.7E-42 T 15-10-2018 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Gene3D G3DSA:3.40.50.20 558 666 8.0E-48 T 15-10-2018 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 842 849 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1071 13.439 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1056 0.0 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.9E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.9E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.9E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 2.9E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.9E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.9E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.9E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Gene3D G3DSA:1.10.1030.10 407 557 2.4E-47 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 SUPERFAMILY SSF48108 396 558 9.68E-52 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1066 13.08 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Gene3D G3DSA:3.40.50.20 1 116 3.5E-48 T 15-10-2018 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 713 727 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Gene3D G3DSA:3.30.470.20 119 403 6.8E-126 T 15-10-2018 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Gene3D G3DSA:3.30.470.20 669 939 1.1E-117 T 15-10-2018 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 SUPERFAMILY SSF52335 939 1074 1.09E-41 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 SUPERFAMILY SSF56059 128 401 1.4E-108 T 15-10-2018 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 431 551 9.0E-40 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Gene3D G3DSA:3.40.50.1380 940 1076 8.3E-40 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 SUPERFAMILY SSF56059 677 937 5.13E-103 T 15-10-2018 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 677 879 1.1E-34 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 334 9.0E-70 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 SMART SM00851 959 1045 4.0E-36 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 SUPERFAMILY SSF52440 560 679 1.25E-47 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 SUPERFAMILY SSF52440 1 127 2.3E-49 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 SMART SM01096 428 551 1.1E-69 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0708 7f6c7e995b39b9a99f9cc46d9a5b14b0 1081 Pfam PF02142 MGS-like domain 960 1044 3.4E-22 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain THII_3461 2a3c1507f66d305f6b3fb494c6bc9577 194 Gene3D G3DSA:1.10.10.10 1 85 4.7E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3461 2a3c1507f66d305f6b3fb494c6bc9577 194 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 173 1.4E-36 T 15-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 THII_3461 2a3c1507f66d305f6b3fb494c6bc9577 194 SUPERFAMILY SSF46785 87 162 1.97E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_3461 2a3c1507f66d305f6b3fb494c6bc9577 194 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 171 3.8E-51 T 15-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 THII_3461 2a3c1507f66d305f6b3fb494c6bc9577 194 PIRSF PIRSF019345 1 189 2.1E-59 T 15-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 THII_3461 2a3c1507f66d305f6b3fb494c6bc9577 194 SUPERFAMILY SSF46785 3 84 2.9E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_3461 2a3c1507f66d305f6b3fb494c6bc9577 194 Gene3D G3DSA:1.10.10.10 86 178 2.6E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1597 523562da5c90f7258dfc306d21a570df 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 442 3.2E-212 T 15-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 THII_1597 523562da5c90f7258dfc306d21a570df 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 182 328 2.4E-42 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_1597 523562da5c90f7258dfc306d21a570df 442 Gene3D G3DSA:1.10.8.60 334 439 5.2E-37 T 15-10-2018 THII_1597 523562da5c90f7258dfc306d21a570df 442 SMART SM00382 49 331 2.7E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1597 523562da5c90f7258dfc306d21a570df 442 SMART SM01086 334 428 3.6E-19 T 15-10-2018 IPR019489 Clp ATPase, C-terminal THII_1597 523562da5c90f7258dfc306d21a570df 442 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 99 2.1E-6 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_1597 523562da5c90f7258dfc306d21a570df 442 SUPERFAMILY SSF52540 3 440 3.37E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1597 523562da5c90f7258dfc306d21a570df 442 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 442 43.045 T 15-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 THII_2332 a4d5eb5532bbcd3d7dd3360222b6867b 577 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 175 9.2E-60 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 THII_2332 a4d5eb5532bbcd3d7dd3360222b6867b 577 SUPERFAMILY SSF52518 8 189 4.21E-67 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_2332 a4d5eb5532bbcd3d7dd3360222b6867b 577 Gene3D G3DSA:3.40.50.970 2 191 6.7E-74 T 15-10-2018 THII_2332 a4d5eb5532bbcd3d7dd3360222b6867b 577 SUPERFAMILY SSF52467 193 366 3.27E-66 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily THII_2332 a4d5eb5532bbcd3d7dd3360222b6867b 577 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 10 570 1.4E-266 T 15-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 THII_2332 a4d5eb5532bbcd3d7dd3360222b6867b 577 SUPERFAMILY SSF52518 372 574 1.46E-66 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_2332 a4d5eb5532bbcd3d7dd3360222b6867b 577 Gene3D G3DSA:3.40.50.970 369 574 1.2E-64 T 15-10-2018 THII_2332 a4d5eb5532bbcd3d7dd3360222b6867b 577 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 333 1.0E-44 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 THII_2332 a4d5eb5532bbcd3d7dd3360222b6867b 577 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 398 545 1.5E-47 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 THII_2332 a4d5eb5532bbcd3d7dd3360222b6867b 577 Gene3D G3DSA:3.40.50.1220 196 364 5.1E-62 T 15-10-2018 THII_2380 7bef16116529761376ad4adee847a2bc 132 Pfam PF03703 Bacterial PH domain 45 120 5.4E-15 T 15-10-2018 IPR005182 Domain of unknown function DUF304 THII_2183 8cf3c9e53c649c76cb48f0ad1f142289 427 Pfam PF00079 Serpin (serine protease inhibitor) 42 421 1.0E-120 T 15-10-2018 IPR023796 Serpin domain THII_2183 8cf3c9e53c649c76cb48f0ad1f142289 427 SUPERFAMILY SSF56574 20 421 1.44E-123 T 15-10-2018 IPR036186 Serpin superfamily THII_2183 8cf3c9e53c649c76cb48f0ad1f142289 427 SMART SM00093 48 421 2.4E-133 T 15-10-2018 IPR023796 Serpin domain THII_2183 8cf3c9e53c649c76cb48f0ad1f142289 427 Gene3D G3DSA:2.30.39.10 207 421 1.3E-128 T 15-10-2018 THII_2183 8cf3c9e53c649c76cb48f0ad1f142289 427 Gene3D G3DSA:3.30.497.10 45 369 1.3E-128 T 15-10-2018 THII_2183 8cf3c9e53c649c76cb48f0ad1f142289 427 ProSitePatterns PS00284 Serpins signature. 394 404 - T 15-10-2018 IPR023795 Serpin, conserved site THII_3136 7134ce76dee36089f6f14f94f4bece52 495 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 176 1.4E-46 T 15-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain THII_3136 7134ce76dee36089f6f14f94f4bece52 495 Gene3D G3DSA:3.30.470.20 369 484 7.9E-17 T 15-10-2018 THII_3136 7134ce76dee36089f6f14f94f4bece52 495 SUPERFAMILY SSF56059 277 486 1.41E-37 T 15-10-2018 THII_3136 7134ce76dee36089f6f14f94f4bece52 495 Gene3D G3DSA:3.30.1490.20 287 368 3.9E-9 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 THII_3136 7134ce76dee36089f6f14f94f4bece52 495 Pfam PF08443 RimK-like ATP-grasp domain 286 464 6.8E-10 T 15-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 THII_1785 359250a5cd6a4bfe8fb5635bdf9d950f 192 Gene3D G3DSA:3.40.50.2300 1 131 5.3E-21 T 15-10-2018 THII_1785 359250a5cd6a4bfe8fb5635bdf9d950f 192 SMART SM00448 3 114 1.1E-8 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1785 359250a5cd6a4bfe8fb5635bdf9d950f 192 Pfam PF00072 Response regulator receiver domain 5 110 4.1E-15 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1785 359250a5cd6a4bfe8fb5635bdf9d950f 192 PIRSF PIRSF036382 1 192 2.5E-59 T 15-10-2018 IPR008327 Signal transduction response regulator, antiterminator THII_1785 359250a5cd6a4bfe8fb5635bdf9d950f 192 Pfam PF03861 ANTAR domain 133 185 2.3E-19 T 15-10-2018 IPR005561 ANTAR domain GO:0003723 THII_1785 359250a5cd6a4bfe8fb5635bdf9d950f 192 SUPERFAMILY SSF52172 1 185 5.12E-48 T 15-10-2018 IPR011006 CheY-like superfamily THII_1785 359250a5cd6a4bfe8fb5635bdf9d950f 192 SMART SM01012 130 185 1.0E-23 T 15-10-2018 IPR005561 ANTAR domain GO:0003723 THII_1785 359250a5cd6a4bfe8fb5635bdf9d950f 192 Gene3D G3DSA:1.10.10.10 133 190 3.0E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0328 74c4bf84c1e5ea3ab3b4f3a03118072f 508 SMART SM00220 23 295 9.3E-31 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_0328 74c4bf84c1e5ea3ab3b4f3a03118072f 508 Pfam PF00069 Protein kinase domain 24 243 2.2E-35 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_0328 74c4bf84c1e5ea3ab3b4f3a03118072f 508 Gene3D G3DSA:1.10.510.10 125 292 8.8E-54 T 15-10-2018 THII_0328 74c4bf84c1e5ea3ab3b4f3a03118072f 508 SUPERFAMILY SSF56112 14 303 1.35E-54 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_0328 74c4bf84c1e5ea3ab3b4f3a03118072f 508 Gene3D G3DSA:3.30.200.20 10 124 8.8E-54 T 15-10-2018 THII_0328 74c4bf84c1e5ea3ab3b4f3a03118072f 508 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 161 173 - T 15-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 THII_0328 74c4bf84c1e5ea3ab3b4f3a03118072f 508 Gene3D G3DSA:2.30.30.40 426 498 1.7E-8 T 15-10-2018 THII_2791 6854b0915e08b7d2c64e9f085f9a44a6 335 Gene3D G3DSA:3.30.420.40 147 312 7.4E-52 T 15-10-2018 THII_2791 6854b0915e08b7d2c64e9f085f9a44a6 335 Pfam PF06723 MreB/Mbl protein 8 299 9.0E-16 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 THII_2791 6854b0915e08b7d2c64e9f085f9a44a6 335 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 9 16 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 THII_2791 6854b0915e08b7d2c64e9f085f9a44a6 335 Gene3D G3DSA:3.30.420.40 1 146 3.7E-38 T 15-10-2018 THII_2791 6854b0915e08b7d2c64e9f085f9a44a6 335 SUPERFAMILY SSF53067 151 300 5.4E-20 T 15-10-2018 THII_1352 d2649988587bdf341681a78167a59ada 1036 Gene3D G3DSA:3.30.70.1430 43 808 9.9E-259 T 15-10-2018 THII_1352 d2649988587bdf341681a78167a59ada 1036 SUPERFAMILY SSF82693 44 129 1.4E-22 T 15-10-2018 THII_1352 d2649988587bdf341681a78167a59ada 1036 SUPERFAMILY SSF82714 713 795 6.15E-13 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_1352 d2649988587bdf341681a78167a59ada 1036 Gene3D G3DSA:1.20.1640.10 514 1016 9.9E-259 T 15-10-2018 THII_1352 d2649988587bdf341681a78167a59ada 1036 Gene3D G3DSA:3.30.2090.10 183 274 9.9E-259 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_1352 d2649988587bdf341681a78167a59ada 1036 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 2 1019 2.9E-231 T 15-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 THII_1352 d2649988587bdf341681a78167a59ada 1036 Gene3D G3DSA:3.30.2090.10 714 800 9.9E-259 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_1352 d2649988587bdf341681a78167a59ada 1036 Pfam PF00873 AcrB/AcrD/AcrF family 7 1017 8.9E-254 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1352 d2649988587bdf341681a78167a59ada 1036 Gene3D G3DSA:3.30.70.1430 565 662 9.9E-259 T 15-10-2018 THII_1352 d2649988587bdf341681a78167a59ada 1036 SUPERFAMILY SSF82866 294 500 4.45E-35 T 15-10-2018 THII_1352 d2649988587bdf341681a78167a59ada 1036 SUPERFAMILY SSF82714 186 268 6.15E-12 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THII_1352 d2649988587bdf341681a78167a59ada 1036 SUPERFAMILY SSF82866 794 1019 8.24E-42 T 15-10-2018 THII_1352 d2649988587bdf341681a78167a59ada 1036 Gene3D G3DSA:1.20.1640.10 15 513 9.9E-259 T 15-10-2018 THII_1352 d2649988587bdf341681a78167a59ada 1036 Gene3D G3DSA:3.30.70.1320 136 328 9.9E-259 T 15-10-2018 THII_1352 d2649988587bdf341681a78167a59ada 1036 SUPERFAMILY SSF82693 141 321 1.15E-16 T 15-10-2018 THII_1352 d2649988587bdf341681a78167a59ada 1036 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 3.3E-34 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1352 d2649988587bdf341681a78167a59ada 1036 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 3.3E-34 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1352 d2649988587bdf341681a78167a59ada 1036 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 3.3E-34 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1352 d2649988587bdf341681a78167a59ada 1036 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 3.3E-34 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1352 d2649988587bdf341681a78167a59ada 1036 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 3.3E-34 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1352 d2649988587bdf341681a78167a59ada 1036 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.3E-34 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1352 d2649988587bdf341681a78167a59ada 1036 Gene3D G3DSA:3.30.70.1440 663 858 9.9E-259 T 15-10-2018 THII_1936 baa06ff98592fc8944e7b541af1cc2df 366 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 98 348 1.4E-9 T 15-10-2018 IPR013830 SGNH hydrolase-type esterase domain THII_1936 baa06ff98592fc8944e7b541af1cc2df 366 SUPERFAMILY SSF52266 94 359 1.96E-22 T 15-10-2018 THII_1734 48a45e69e1111da4adf85518fc72fd0d 387 Pfam PF02684 Lipid-A-disaccharide synthetase 4 373 1.4E-115 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 THII_1734 48a45e69e1111da4adf85518fc72fd0d 387 Gene3D G3DSA:3.40.50.2000 172 355 2.8E-6 T 15-10-2018 THII_1734 48a45e69e1111da4adf85518fc72fd0d 387 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 373 3.3E-121 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 THII_1734 48a45e69e1111da4adf85518fc72fd0d 387 SUPERFAMILY SSF53756 1 352 1.29E-37 T 15-10-2018 THII_1734 48a45e69e1111da4adf85518fc72fd0d 387 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 376 37.8 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 THII_1789 ed2e00424af2ac1fc4f1867c54cc225e 262 SMART SM00382 26 235 2.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1789 ed2e00424af2ac1fc4f1867c54cc225e 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_1789 ed2e00424af2ac1fc4f1867c54cc225e 262 Pfam PF00005 ABC transporter 19 166 8.8E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_1789 ed2e00424af2ac1fc4f1867c54cc225e 262 Gene3D G3DSA:3.40.50.300 1 253 1.4E-65 T 15-10-2018 THII_1789 ed2e00424af2ac1fc4f1867c54cc225e 262 SUPERFAMILY SSF52540 2 227 4.64E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1104 a24d7dd592077e9f301d0f83fa39505f 172 Gene3D G3DSA:3.50.70.20 32 170 1.7E-16 T 15-10-2018 IPR038142 Cytochrome P460 superfamily THII_1104 a24d7dd592077e9f301d0f83fa39505f 172 Pfam PF16694 Cytochrome P460 40 166 1.8E-38 T 15-10-2018 IPR032033 Cytochrome P460 THII_0366 6991c7c90d7927f2b34cd8650aab2ad4 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.245 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_0366 6991c7c90d7927f2b34cd8650aab2ad4 419 Gene3D G3DSA:3.65.10.10 6 414 3.7E-165 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 THII_0366 6991c7c90d7927f2b34cd8650aab2ad4 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 7.1E-177 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_0366 6991c7c90d7927f2b34cd8650aab2ad4 419 SUPERFAMILY SSF55205 1 417 4.09E-138 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 THII_0366 6991c7c90d7927f2b34cd8650aab2ad4 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 1.3E-112 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 THII_0366 6991c7c90d7927f2b34cd8650aab2ad4 419 Gene3D G3DSA:3.65.10.10 21 229 3.7E-165 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 THII_0317 8069c777766964d8b73637595eb2a122 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.4E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0317 8069c777766964d8b73637595eb2a122 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.4E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0317 8069c777766964d8b73637595eb2a122 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.4E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0317 8069c777766964d8b73637595eb2a122 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.4E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0317 8069c777766964d8b73637595eb2a122 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.4E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0317 8069c777766964d8b73637595eb2a122 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.4E-60 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0317 8069c777766964d8b73637595eb2a122 124 SUPERFAMILY SSF50249 3 123 2.23E-51 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0317 8069c777766964d8b73637595eb2a122 124 Gene3D G3DSA:2.40.50.140 1 124 3.9E-62 T 15-10-2018 THII_0317 8069c777766964d8b73637595eb2a122 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0317 8069c777766964d8b73637595eb2a122 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 5.5E-68 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0317 8069c777766964d8b73637595eb2a122 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.528 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0317 8069c777766964d8b73637595eb2a122 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 7.2E-42 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0317 8069c777766964d8b73637595eb2a122 124 PIRSF PIRSF002133 1 124 5.2E-54 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_3827 a3e4996ecfc77deaab39571759c9582e 113 Pfam PF03091 CutA1 divalent ion tolerance protein 9 105 3.1E-35 T 15-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 THII_3827 a3e4996ecfc77deaab39571759c9582e 113 Gene3D G3DSA:3.30.70.120 3 112 5.2E-39 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THII_3827 a3e4996ecfc77deaab39571759c9582e 113 SUPERFAMILY SSF54913 5 108 3.45E-37 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta THII_0163 15f38d09d0703b4e0d403a1aa0811789 377 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 242 315 5.7E-15 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal THII_0163 15f38d09d0703b4e0d403a1aa0811789 377 Pfam PF07282 Putative transposase DNA-binding domain 288 357 1.8E-24 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal THII_0163 15f38d09d0703b4e0d403a1aa0811789 377 Pfam PF12323 Helix-turn-helix domain 3 34 2.2E-14 T 15-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain THII_0163 15f38d09d0703b4e0d403a1aa0811789 377 Pfam PF01385 Probable transposase 166 274 2.1E-23 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 THII_2959 d003fb0ddd005577cec2ee8d42356b88 270 Pfam PF00290 Tryptophan synthase alpha chain 8 246 1.9E-86 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_2959 d003fb0ddd005577cec2ee8d42356b88 270 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 33.655 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_2959 d003fb0ddd005577cec2ee8d42356b88 270 SUPERFAMILY SSF51366 1 252 2.64E-89 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 THII_2959 d003fb0ddd005577cec2ee8d42356b88 270 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 15-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_2959 d003fb0ddd005577cec2ee8d42356b88 270 Gene3D G3DSA:3.20.20.70 1 268 1.2E-99 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2959 d003fb0ddd005577cec2ee8d42356b88 270 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 1.4E-74 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.10.129.110 3827 4128 2.8E-76 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF56801 46 546 2.75E-156 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.40.109.10 999 1225 5.0E-23 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.40.109.10 743 966 2.0E-24 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.40.50.12780 49 448 1.0E-145 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.40.47.10 1279 1862 4.8E-193 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF00550 Phosphopantetheine attachment site 576 639 4.8E-11 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF00550 Phosphopantetheine attachment site 3099 3162 8.3E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF00550 Phosphopantetheine attachment site 4589 4657 1.1E-14 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF00550 Phosphopantetheine attachment site 5875 5939 1.9E-6 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF00550 Phosphopantetheine attachment site 680 743 1.7E-9 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.40.47.10 3210 3796 1.2E-244 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF53901 2001 2423 2.15E-94 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF51735 2819 3026 1.92E-30 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF47336 3095 3221 2.88E-9 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.30.70.3290 5168 5290 2.4E-235 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF00501 AMP-binding enzyme 59 455 3.6E-106 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00825 Beta-ketoacyl synthase 4711 5148 8.9E-195 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00825 Beta-ketoacyl synthase 2006 2428 1.1E-194 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00825 Beta-ketoacyl synthase 3211 3634 5.9E-187 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00825 Beta-ketoacyl synthase 1279 1714 1.9E-124 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:1.10.1200.10 679 742 1.2E-10 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:1.10.1200.10 5871 5939 5.1E-8 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF47336 4586 4665 7.07E-14 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.40.47.10 4712 5302 2.4E-235 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 5093 5209 7.3E-14 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2382 2473 1.2E-10 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1664 1769 1.3E-7 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3580 3694 7.1E-13 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00826 3820 3991 7.5E-17 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4709 4957 2.8E-83 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3209 3451 3.4E-77 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1277 1532 2.9E-67 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2004 2253 4.3E-82 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF53901 1276 1708 1.53E-69 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2202 3fefed511ab7333bca051448640d2499 6326 ProSitePatterns PS00455 Putative AMP-binding domain signature. 199 210 - T 15-10-2018 IPR020845 AMP-binding, conserved site THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM01294 4588 4657 5.5E-7 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF51735 4315 4559 9.36E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF53901 3206 3629 4.18E-92 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF47336 5873 5949 4.84E-9 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 78 479 1.0E-137 T 15-10-2018 IPR010071 Amino acid adenylation domain THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.30.70.3050 2496 2592 6.2E-244 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.30.70.3050 3687 3785 1.2E-244 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF14765 Polyketide synthase dehydratase 3820 4122 5.3E-56 T 15-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF55469 794 965 4.4E-5 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.30.70.3290 5965 6317 8.0E-99 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.40.366.10 5979 6302 8.0E-99 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF47336 675 749 7.33E-11 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF47336 568 648 6.94E-13 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5983 6301 1.1E-76 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00823 Phosphopantetheine attachment site 678 747 0.036 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00823 Phosphopantetheine attachment site 577 643 9.3E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00823 Phosphopantetheine attachment site 5874 5929 0.4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00823 Phosphopantetheine attachment site 3097 3167 5.1E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00823 Phosphopantetheine attachment site 4587 4661 9.8E-14 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00823 Phosphopantetheine attachment site 1893 1963 0.047 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF13193 AMP-binding enzyme C-terminal domain 463 536 2.4E-8 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:1.10.1200.10 566 643 6.1E-14 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF47336 1886 2018 1.96E-8 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF53901 4706 5144 1.97E-88 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.30.300.30 451 548 5.3E-30 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.30.70.3290 1723 1846 4.8E-193 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.40.50.720 2638 3068 2.9E-127 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.40.50.720 4133 4562 1.8E-127 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.40.50.720 5396 5767 4.7E-69 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF00698 Acyl transferase domain 5981 6271 1.6E-30 T 15-10-2018 IPR014043 Acyl transferase THII_2202 3fefed511ab7333bca051448640d2499 6326 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 4870 4886 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:1.10.1200.10 3092 3171 3.6E-12 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:1.10.1200.10 4579 4666 1.4E-18 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2824 3012 2.2E-44 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5542 5725 5.8E-27 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4317 4507 2.1E-44 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF08659 KR domain 4317 4505 2.7E-51 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF08659 KR domain 2824 3011 7.0E-51 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF08659 KR domain 5542 5723 1.0E-38 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 4965 5089 6.9E-37 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3459 3576 5.9E-41 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2261 2378 6.2E-42 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2202 3fefed511ab7333bca051448640d2499 6326 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1544 1659 1.6E-29 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.30.70.250 6130 6190 8.0E-99 T 15-10-2018 THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF51735 5538 5750 3.52E-23 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:1.10.1200.10 1879 1962 2.5E-10 T 15-10-2018 IPR036736 ACP-like superfamily THII_2202 3fefed511ab7333bca051448640d2499 6326 SUPERFAMILY SSF52151 5980 6288 7.59E-56 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_2202 3fefed511ab7333bca051448640d2499 6326 Gene3D G3DSA:3.40.47.10 2005 2603 6.2E-244 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2432 f4ee795e966c91a5228c16ff5bcdbf8a 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 15-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 THII_2432 f4ee795e966c91a5228c16ff5bcdbf8a 112 Gene3D G3DSA:3.30.70.120 1 112 4.0E-46 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THII_2432 f4ee795e966c91a5228c16ff5bcdbf8a 112 PIRSF PIRSF039144 1 112 9.5E-54 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 THII_2432 f4ee795e966c91a5228c16ff5bcdbf8a 112 SMART SM00938 4 105 8.3E-65 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 THII_2432 f4ee795e966c91a5228c16ff5bcdbf8a 112 PRINTS PR00340 P-II protein signature 23 41 5.2E-43 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 THII_2432 f4ee795e966c91a5228c16ff5bcdbf8a 112 PRINTS PR00340 P-II protein signature 52 75 5.2E-43 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 THII_2432 f4ee795e966c91a5228c16ff5bcdbf8a 112 PRINTS PR00340 P-II protein signature 83 103 5.2E-43 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 THII_2432 f4ee795e966c91a5228c16ff5bcdbf8a 112 PRINTS PR00340 P-II protein signature 2 17 5.2E-43 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 THII_2432 f4ee795e966c91a5228c16ff5bcdbf8a 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 15-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 THII_2432 f4ee795e966c91a5228c16ff5bcdbf8a 112 SUPERFAMILY SSF54913 1 112 1.05E-45 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta THII_2432 f4ee795e966c91a5228c16ff5bcdbf8a 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.3E-42 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 Gene3D G3DSA:1.25.40.10 715 853 3.1E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 Gene3D G3DSA:1.25.40.10 486 669 8.4E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 Pfam PF00069 Protein kinase domain 42 256 1.1E-31 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 SUPERFAMILY SSF48452 749 833 9.49E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 175 187 - T 15-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 SMART SM00028 753 786 17.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 SMART SM00028 471 504 19.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 SMART SM00028 411 444 72.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 SMART SM00028 797 830 100.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 Gene3D G3DSA:1.10.510.10 138 308 4.7E-59 T 15-10-2018 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 43 66 - T 15-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 SUPERFAMILY SSF56112 25 326 8.9E-52 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_3225 153f9ec55f9ef5a58550f7ae72b23ce7 864 Gene3D G3DSA:3.30.200.20 6 137 4.7E-59 T 15-10-2018 THII_3902 40ba99571236529b853a75e0f76f1e14 131 SMART SM00448 6 119 6.4E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3902 40ba99571236529b853a75e0f76f1e14 131 Gene3D G3DSA:3.40.50.2300 2 131 7.0E-30 T 15-10-2018 THII_3902 40ba99571236529b853a75e0f76f1e14 131 Pfam PF00072 Response regulator receiver domain 8 118 1.2E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3902 40ba99571236529b853a75e0f76f1e14 131 SUPERFAMILY SSF52172 4 125 4.13E-33 T 15-10-2018 IPR011006 CheY-like superfamily THII_0823 e410c81aeb1330fe69ac097c8cc14553 388 Gene3D G3DSA:3.40.1090.10 3 292 1.0E-67 T 15-10-2018 THII_0823 e410c81aeb1330fe69ac097c8cc14553 388 Pfam PF01734 Patatin-like phospholipase 15 199 9.8E-24 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 THII_0823 e410c81aeb1330fe69ac097c8cc14553 388 SUPERFAMILY SSF52151 8 277 1.7E-45 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_2920 499ccc0c11cf9b2f287101bd1c78bc90 74 Gene3D G3DSA:1.20.58.720 1 70 3.9E-5 T 15-10-2018 THII_2920 499ccc0c11cf9b2f287101bd1c78bc90 74 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 47 7.9E-13 T 15-10-2018 IPR022453 Zinc finger, MqsA-type THII_1906 0bc25b7d0249bbf4d837c764ad16456f 151 SUPERFAMILY SSF89095 5 150 2.62E-40 T 15-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 THII_1906 0bc25b7d0249bbf4d837c764ad16456f 151 Gene3D G3DSA:1.10.10.410 94 150 1.2E-16 T 15-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal THII_1906 0bc25b7d0249bbf4d837c764ad16456f 151 Pfam PF09424 Yqey-like protein 7 149 3.1E-54 T 15-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 THII_1906 0bc25b7d0249bbf4d837c764ad16456f 151 Gene3D G3DSA:1.10.1510.10 4 93 2.3E-29 T 15-10-2018 THII_1624 98e31b3bf0e4c3056b629e4f26cc930f 184 Gene3D G3DSA:1.10.10.10 93 184 2.5E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1624 98e31b3bf0e4c3056b629e4f26cc930f 184 SMART SM00448 1 72 2.3E-5 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1624 98e31b3bf0e4c3056b629e4f26cc930f 184 Pfam PF00486 Transcriptional regulatory protein, C terminal 107 182 2.3E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_1624 98e31b3bf0e4c3056b629e4f26cc930f 184 Pfam PF00072 Response regulator receiver domain 4 72 4.6E-16 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1624 98e31b3bf0e4c3056b629e4f26cc930f 184 SUPERFAMILY SSF46894 91 183 3.12E-25 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 THII_1624 98e31b3bf0e4c3056b629e4f26cc930f 184 Gene3D G3DSA:3.40.50.2300 1 82 1.3E-22 T 15-10-2018 THII_1624 98e31b3bf0e4c3056b629e4f26cc930f 184 SMART SM00862 106 182 5.6E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_1624 98e31b3bf0e4c3056b629e4f26cc930f 184 SUPERFAMILY SSF52172 3 78 2.99E-27 T 15-10-2018 IPR011006 CheY-like superfamily THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 SUPERFAMILY SSF74863 87 203 2.09E-31 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 Gene3D G3DSA:3.40.30.10 705 833 3.5E-31 T 15-10-2018 THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 Pfam PF13899 Thioredoxin-like 726 804 1.8E-16 T 15-10-2018 THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 418 623 1.5E-17 T 15-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 236 832 33.981 T 15-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 SUPERFAMILY SSF52833 730 830 6.9E-24 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 ProSitePatterns PS00194 Thioredoxin family active site. 740 758 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 Gene3D G3DSA:2.60.40.1250 247 383 4.0E-36 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 Gene3D G3DSA:2.60.40.1250 83 218 2.5E-36 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 Pfam PF11412 Disulphide bond corrector protein DsbC 254 368 4.8E-26 T 15-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 Pfam PF11412 Disulphide bond corrector protein DsbC 89 202 7.4E-29 T 15-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain THII_3828 61b9168cad96f7f3acf5ad8b3255f190 834 SUPERFAMILY SSF74863 253 369 8.37E-31 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily THII_3060 d295d1e5ff2f03e65877a40d908d057a 388 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 140 167 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 THII_3060 d295d1e5ff2f03e65877a40d908d057a 388 Gene3D G3DSA:3.40.50.720 84 278 1.3E-67 T 15-10-2018 THII_3060 d295d1e5ff2f03e65877a40d908d057a 388 SUPERFAMILY SSF55021 312 388 4.12E-9 T 15-10-2018 THII_3060 d295d1e5ff2f03e65877a40d908d057a 388 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 23 306 1.1E-18 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 THII_3060 d295d1e5ff2f03e65877a40d908d057a 388 Gene3D G3DSA:3.30.70.260 308 388 1.9E-15 T 15-10-2018 THII_3060 d295d1e5ff2f03e65877a40d908d057a 388 SUPERFAMILY SSF51735 86 275 6.43E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3060 d295d1e5ff2f03e65877a40d908d057a 388 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 274 3.5E-35 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 THII_3060 d295d1e5ff2f03e65877a40d908d057a 388 Gene3D G3DSA:3.40.50.720 21 303 1.3E-67 T 15-10-2018 THII_3060 d295d1e5ff2f03e65877a40d908d057a 388 SUPERFAMILY SSF52283 7 106 7.94E-20 T 15-10-2018 THII_2162 488d6e27f5a53fe7478e1a8eaa696479 342 Pfam PF03116 NQR2, RnfD, RnfE family 5 341 9.8E-99 T 15-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 THII_2162 488d6e27f5a53fe7478e1a8eaa696479 342 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 342 1.1E-121 T 15-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 THII_2162 488d6e27f5a53fe7478e1a8eaa696479 342 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 342 25.13 T 15-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Pfam PF12799 Leucine Rich repeats (2 copies) 143 179 6.1E-7 T 15-10-2018 IPR025875 Leucine rich repeat 4 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Pfam PF12799 Leucine Rich repeats (2 copies) 215 258 6.2E-7 T 15-10-2018 IPR025875 Leucine rich repeat 4 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Pfam PF08126 Propeptide_C25 594 758 1.5E-23 T 15-10-2018 IPR012600 Gingipain propeptide GO:0004197 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Pfam PF00041 Fibronectin type III domain 370 445 2.0E-7 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Pfam PF01364 Peptidase family C25 809 1222 1.6E-73 T 15-10-2018 IPR001769 Gingipain GO:0006508|GO:0008234 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SUPERFAMILY SSF52058 64 351 1.05E-54 T 15-10-2018 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00365 165 192 91.0 T 15-10-2018 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00365 331 352 150.0 T 15-10-2018 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00365 237 259 100.0 T 15-10-2018 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00365 260 282 72.0 T 15-10-2018 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00365 142 164 44.0 T 15-10-2018 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00365 214 236 53.0 T 15-10-2018 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Gene3D G3DSA:3.40.50.10390 798 924 1.8E-29 T 15-10-2018 IPR029031 Gingipain, N-terminal superfamily THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Gene3D G3DSA:3.40.50.1460 1031 1225 6.2E-35 T 15-10-2018 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Gene3D G3DSA:2.60.40.3800 585 788 1.7E-48 T 15-10-2018 IPR038490 Gingipain propeptide superfamily THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Gene3D G3DSA:2.60.40.10 366 469 1.0E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SUPERFAMILY SSF52129 804 1224 6.59E-54 T 15-10-2018 IPR029030 Caspase-like domain superfamily THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00060 367 451 3.2E-7 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Gene3D G3DSA:3.80.10.10 257 365 1.3E-24 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Pfam PF03785 Peptidase family C25, C terminal ig-like domain 1232 1310 6.6E-9 T 15-10-2018 IPR005536 Peptidase C25, Ig-like domain GO:0006508|GO:0008233 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Pfam PF08263 Leucine rich repeat N-terminal domain 49 88 6.3E-5 T 15-10-2018 IPR013210 Leucine-rich repeat-containing N-terminal, plant-type THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00369 165 190 6.7 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00369 331 354 60.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00369 214 237 37.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00369 260 282 65.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00369 142 164 320.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SMART SM00369 283 307 44.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3409 03a555c4da749b296af0b8e38237bf77 2194 SUPERFAMILY SSF49265 369 448 1.4E-11 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Gene3D G3DSA:3.80.10.10 165 256 5.4E-25 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3409 03a555c4da749b296af0b8e38237bf77 2194 Gene3D G3DSA:3.80.10.10 48 164 5.7E-22 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1421 c103978243d13cd5c59b551a0351426b 290 Gene3D G3DSA:3.40.50.1820 32 278 5.2E-41 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1421 c103978243d13cd5c59b551a0351426b 290 SUPERFAMILY SSF53474 34 234 2.23E-34 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1421 c103978243d13cd5c59b551a0351426b 290 Pfam PF01764 Lipase (class 3) 102 218 5.4E-22 T 15-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 Gene3D G3DSA:2.130.10.10 124 225 6.8E-40 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 PRINTS PR00320 G protein beta WD-40 repeat signature 178 192 5.3E-9 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 PRINTS PR00320 G protein beta WD-40 repeat signature 50 64 5.3E-9 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 PRINTS PR00320 G protein beta WD-40 repeat signature 308 321 5.3E-9 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 Gene3D G3DSA:2.130.10.10 27 123 1.5E-38 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 SUPERFAMILY SSF50978 23 321 7.99E-102 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 178 192 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 PIRSF PIRSF002394 224 321 3.0E-18 T 15-10-2018 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 PIRSF PIRSF002394 92 275 3.3E-39 T 15-10-2018 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 PIRSF PIRSF002394 21 137 3.0E-22 T 15-10-2018 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 94 108 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 Pfam PF00400 WD domain, G-beta repeat 283 320 4.9E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 Pfam PF00400 WD domain, G-beta repeat 124 149 2.6E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 Pfam PF00400 WD domain, G-beta repeat 195 234 3.7E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 Pfam PF00400 WD domain, G-beta repeat 26 62 4.0E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 Pfam PF00400 WD domain, G-beta repeat 67 106 1.0E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 Pfam PF00400 WD domain, G-beta repeat 239 278 3.2E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 Pfam PF00400 WD domain, G-beta repeat 153 191 8.7E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 266 280 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 SMART SM00320 66 107 2.9E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 SMART SM00320 152 191 2.5E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 SMART SM00320 24 63 7.0E-13 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 SMART SM00320 194 235 9.1E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 SMART SM00320 282 321 8.8E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 SMART SM00320 238 279 1.6E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 SMART SM00320 110 149 1.4E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 Gene3D G3DSA:2.130.10.10 226 321 2.0E-30 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3140 c546ed5fcc0b4ff77506f83e781a2b41 321 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 136 150 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3134 beb363a1a2f43d2ae932ea94edc93a69 339 Gene3D G3DSA:3.40.50.150 22 238 3.3E-23 T 15-10-2018 THII_3134 beb363a1a2f43d2ae932ea94edc93a69 339 SUPERFAMILY SSF53335 32 233 4.82E-25 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3134 beb363a1a2f43d2ae932ea94edc93a69 339 Pfam PF13847 Methyltransferase domain 63 146 2.9E-14 T 15-10-2018 IPR025714 Methyltransferase domain THII_2093 9969eeb22cdb56cd9dc5129366790dc0 248 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 213 3.9E-33 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel THII_1125 b84d7958542effae41e6371da5636d3a 328 PRINTS PR01003 Flagellar assembly protein FliH signature 237 259 2.8E-5 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 THII_1125 b84d7958542effae41e6371da5636d3a 328 PRINTS PR01003 Flagellar assembly protein FliH signature 260 278 2.8E-5 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 THII_0195 a86f48f62f3a38021436e744eb198843 475 SUPERFAMILY SSF47741 80 158 2.09E-24 T 15-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily THII_0195 a86f48f62f3a38021436e744eb198843 475 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 THII_0195 a86f48f62f3a38021436e744eb198843 475 SUPERFAMILY SSF56176 212 352 2.49E-31 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 THII_0195 a86f48f62f3a38021436e744eb198843 475 Pfam PF01799 [2Fe-2S] binding domain 80 150 1.0E-22 T 15-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 THII_0195 a86f48f62f3a38021436e744eb198843 475 Gene3D G3DSA:3.30.465.10 200 355 8.4E-35 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_0195 a86f48f62f3a38021436e744eb198843 475 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 52 1.3E-6 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 THII_0195 a86f48f62f3a38021436e744eb198843 475 Gene3D G3DSA:1.10.150.120 84 184 3.4E-23 T 15-10-2018 THII_0195 a86f48f62f3a38021436e744eb198843 475 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 212 351 1.6E-28 T 15-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 THII_0195 a86f48f62f3a38021436e744eb198843 475 SUPERFAMILY SSF55447 363 465 9.81E-22 T 15-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily THII_0195 a86f48f62f3a38021436e744eb198843 475 SUPERFAMILY SSF54292 2 85 1.44E-17 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 THII_0195 a86f48f62f3a38021436e744eb198843 475 Gene3D G3DSA:3.30.390.50 357 467 3.0E-21 T 15-10-2018 THII_0195 a86f48f62f3a38021436e744eb198843 475 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 363 460 4.7E-20 T 15-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal THII_0195 a86f48f62f3a38021436e744eb198843 475 SMART SM01092 361 463 1.0E-12 T 15-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal THII_0195 a86f48f62f3a38021436e744eb198843 475 Gene3D G3DSA:3.10.20.30 1 83 7.8E-23 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 3.0E-28 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 SUPERFAMILY SSF52440 1 103 2.16E-35 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 SUPERFAMILY SSF51246 329 423 2.2E-31 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 Gene3D G3DSA:3.40.50.20 2 95 6.5E-38 T 15-10-2018 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 15-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 Gene3D G3DSA:3.90.600.10 330 423 1.0E-32 T 15-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 4.0E-78 T 15-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 42.155 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.7E-35 T 15-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 SMART SM01209 103 296 3.3E-134 T 15-10-2018 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 SMART SM01210 330 423 5.4E-52 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 SUPERFAMILY SSF56059 104 325 3.01E-63 T 15-10-2018 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 Gene3D G3DSA:3.30.470.20 191 329 1.7E-59 T 15-10-2018 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 2.6E-176 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_0124 4ed706ec5d4f854360982f0c8bf874b6 423 Gene3D G3DSA:3.30.1490.20 121 190 1.2E-25 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 THII_1577 db07f3273ba6e3d7039995cdad5927b8 587 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 4 575 4.0E-256 T 15-10-2018 IPR030998 Thiosulfohydrolase SoxB THII_1577 db07f3273ba6e3d7039995cdad5927b8 587 Gene3D G3DSA:3.90.780.10 393 582 2.5E-67 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_1577 db07f3273ba6e3d7039995cdad5927b8 587 Gene3D G3DSA:3.60.21.10 102 392 1.5E-77 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like THII_1577 db07f3273ba6e3d7039995cdad5927b8 587 SUPERFAMILY SSF56300 38 392 7.59E-78 T 15-10-2018 THII_1577 db07f3273ba6e3d7039995cdad5927b8 587 PRINTS PR01607 Apyrase family signature 42 60 2.3E-11 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_1577 db07f3273ba6e3d7039995cdad5927b8 587 PRINTS PR01607 Apyrase family signature 279 296 2.3E-11 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_1577 db07f3273ba6e3d7039995cdad5927b8 587 PRINTS PR01607 Apyrase family signature 298 321 2.3E-11 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_1577 db07f3273ba6e3d7039995cdad5927b8 587 PRINTS PR01607 Apyrase family signature 330 350 2.3E-11 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_1577 db07f3273ba6e3d7039995cdad5927b8 587 SUPERFAMILY SSF55816 390 575 1.57E-29 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_1577 db07f3273ba6e3d7039995cdad5927b8 587 Pfam PF02872 5'-nucleotidase, C-terminal domain 409 546 9.2E-15 T 15-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 SMART SM00831 7 61 5.5E-4 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 Pfam PF00122 E1-E2 ATPase 106 311 1.3E-40 T 15-10-2018 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 633 1.1E-15 T 15-10-2018 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 73 172 3.3E-20 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 584 700 4.0E-27 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 Gene3D G3DSA:1.20.1110.10 39 880 5.2E-190 T 15-10-2018 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 Pfam PF00690 Cation transporter/ATPase, N-terminus 7 55 3.3E-12 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 336 342 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 7 880 2.1E-183 T 15-10-2018 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 Gene3D G3DSA:2.70.150.10 7 213 5.2E-190 T 15-10-2018 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 SUPERFAMILY SSF81665 7 888 1.12E-91 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 SUPERFAMILY SSF81660 341 519 1.72E-25 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 Gene3D G3DSA:3.40.1110.10 344 522 5.2E-190 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 SUPERFAMILY SSF56784 333 721 1.48E-45 T 15-10-2018 IPR036412 HAD-like superfamily THII_0386 4a1e1657075214cc22bc987375b2e22c 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 654 7.0E-32 T 15-10-2018 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 537 547 7.0E-32 T 15-10-2018 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 619 638 7.0E-32 T 15-10-2018 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 7.0E-32 T 15-10-2018 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 515 526 7.0E-32 T 15-10-2018 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 7.0E-32 T 15-10-2018 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 650 675 3.1E-14 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 477 495 3.1E-14 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 619 635 3.1E-14 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 SUPERFAMILY SSF81653 107 208 1.31E-24 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 THII_0386 4a1e1657075214cc22bc987375b2e22c 896 Gene3D G3DSA:3.40.50.1000 331 663 5.2E-190 T 15-10-2018 IPR023214 HAD superfamily THII_0386 4a1e1657075214cc22bc987375b2e22c 896 Pfam PF00689 Cation transporting ATPase, C-terminus 703 882 9.0E-38 T 15-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 THII_0640 f794504191565760a6316bcc72bc8f90 1166 SMART SM00968 518 619 1.9E-7 T 15-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 THII_0640 f794504191565760a6316bcc72bc8f90 1166 PIRSF PIRSF005719 1 1164 1.2E-267 T 15-10-2018 IPR024704 Structural maintenance of chromosomes protein THII_0640 f794504191565760a6316bcc72bc8f90 1166 Gene3D G3DSA:3.40.50.300 1 251 2.5E-50 T 15-10-2018 THII_0640 f794504191565760a6316bcc72bc8f90 1166 Gene3D G3DSA:3.40.50.300 870 1166 1.9E-49 T 15-10-2018 THII_0640 f794504191565760a6316bcc72bc8f90 1166 Pfam PF06470 SMC proteins Flexible Hinge Domain 522 618 1.6E-6 T 15-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 THII_0640 f794504191565760a6316bcc72bc8f90 1166 SUPERFAMILY SSF75553 483 667 1.07E-10 T 15-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 THII_0640 f794504191565760a6316bcc72bc8f90 1166 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1157 0.0 T 15-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 THII_0640 f794504191565760a6316bcc72bc8f90 1166 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1150 1.3E-64 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal THII_0640 f794504191565760a6316bcc72bc8f90 1166 SUPERFAMILY SSF90257 791 896 4.45E-5 T 15-10-2018 THII_0640 f794504191565760a6316bcc72bc8f90 1166 SUPERFAMILY SSF52540 1 1156 1.57E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0640 f794504191565760a6316bcc72bc8f90 1166 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1159 21.944 T 15-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF141072 2393 2511 4.32E-17 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF49313 1038 1123 2.2E-9 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF63829 578 767 2.16E-6 T 15-10-2018 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF49313 1125 1208 1.43E-9 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF141072 2520 2633 9.81E-15 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF49313 856 930 3.14E-10 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.60.40.2030 2520 2633 1.5E-10 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.60.40.2030 2394 2510 1.3E-15 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.60.40.2030 2279 2393 1.6E-20 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.60.40.2030 2068 2182 3.2E-22 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.60.40.10 1706 1825 3.6E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF05345 Putative Ig domain 896 930 3.4E-5 T 15-10-2018 IPR008009 Putative Ig THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF05345 Putative Ig domain 990 1022 1.1E-5 T 15-10-2018 IPR008009 Putative Ig THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF141072 2068 2188 9.55E-23 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 197 225 2.2E-4 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 56 83 1.7E-5 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 580 607 1.1E-7 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 103 128 3.3E-5 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 533 560 1.8E-4 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 481 508 9.1E-7 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 387 413 2.6E-7 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 245 272 1.2E-4 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 150 176 1.6E-8 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 340 367 1.9E-6 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 292 318 6.4E-7 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01436 NHL repeat 434 461 1.5E-9 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF01650 Peptidase C13 family 1401 1523 3.7E-7 T 15-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SMART SM00237 2501 2611 0.0045 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SMART SM00237 2050 2159 1.2E-15 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SMART SM00237 1938 2037 1.6E-9 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SMART SM00237 2384 2488 5.6E-7 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SMART SM00237 2269 2371 2.6E-9 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF141072 1947 2060 5.62E-26 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.120.10.30 425 525 1.4E-34 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF141072 2280 2393 1.44E-21 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF03160 Calx-beta domain 1949 2037 3.1E-15 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF03160 Calx-beta domain 2277 2371 1.4E-11 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF03160 Calx-beta domain 2521 2608 3.2E-7 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF03160 Calx-beta domain 2384 2487 4.2E-8 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Pfam PF03160 Calx-beta domain 2063 2158 1.0E-12 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF63829 24 319 6.34E-50 T 15-10-2018 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF63829 328 614 7.85E-50 T 15-10-2018 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF49313 950 1038 7.69E-9 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 SUPERFAMILY SSF49265 1716 1824 1.55E-5 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.120.10.30 526 678 4.4E-27 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.120.10.30 141 237 1.8E-36 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.120.10.30 322 424 1.1E-35 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.120.10.30 238 321 2.4E-28 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.120.10.30 31 140 1.3E-35 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.60.40.10 1123 1209 1.2E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.60.40.10 1036 1122 6.7E-16 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.60.40.10 948 1035 1.1E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.60.40.10 855 946 2.1E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0097 3c549d56f19592c5703c0497330d7a35 2793 Gene3D G3DSA:2.60.40.2030 1942 2066 7.4E-27 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_3107 4426571d19ac371aceaeda9e9bdc3a77 1292 Gene3D G3DSA:2.70.70.10 1123 1278 1.1E-35 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_3107 4426571d19ac371aceaeda9e9bdc3a77 1292 Pfam PF01551 Peptidase family M23 1145 1243 1.1E-19 T 15-10-2018 IPR016047 Peptidase M23 THII_3107 4426571d19ac371aceaeda9e9bdc3a77 1292 SUPERFAMILY SSF51261 1106 1246 6.28E-26 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_3325 4b3eb4b7eb2f5d2259b0bdbc37689bab 100 Pfam PF04247 Invasion gene expression up-regulator, SirB 1 94 2.0E-32 T 15-10-2018 IPR007360 Invasion gene expression up-regulator, SirB THII_3325 4b3eb4b7eb2f5d2259b0bdbc37689bab 100 PIRSF PIRSF005610 1 93 1.8E-22 T 15-10-2018 IPR007360 Invasion gene expression up-regulator, SirB THII_1737 a1f4c4e03e9befee705e9d5fffd9455d 342 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 10 333 4.5E-116 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 THII_1737 a1f4c4e03e9befee705e9d5fffd9455d 342 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 11 330 35.549 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 THII_1737 a1f4c4e03e9befee705e9d5fffd9455d 342 SUPERFAMILY SSF51161 37 321 1.97E-77 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_1737 a1f4c4e03e9befee705e9d5fffd9455d 342 Gene3D G3DSA:2.160.10.10 102 313 4.4E-63 T 15-10-2018 THII_1737 a1f4c4e03e9befee705e9d5fffd9455d 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 202 220 9.8E-4 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1737 a1f4c4e03e9befee705e9d5fffd9455d 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 153 2.3E-7 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1737 a1f4c4e03e9befee705e9d5fffd9455d 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 226 261 8.0E-6 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1737 a1f4c4e03e9befee705e9d5fffd9455d 342 Gene3D G3DSA:3.40.1390.10 2 101 2.4E-23 T 15-10-2018 THII_1737 a1f4c4e03e9befee705e9d5fffd9455d 342 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 27 93 1.1E-15 T 15-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 THII_2016 22c1d92959d7dd47cf4b1c22968a4045 369 Pfam PF05954 Phage late control gene D protein (GPD) 64 183 6.2E-12 T 15-10-2018 THII_2016 22c1d92959d7dd47cf4b1c22968a4045 369 Gene3D G3DSA:3.55.50.10 106 184 3.2E-7 T 15-10-2018 THII_2016 22c1d92959d7dd47cf4b1c22968a4045 369 Gene3D G3DSA:2.30.110.50 67 105 3.2E-7 T 15-10-2018 THII_2016 22c1d92959d7dd47cf4b1c22968a4045 369 SUPERFAMILY SSF69279 36 183 6.38E-19 T 15-10-2018 THII_3028 fa039a4e83186aff24c5730b6725707b 247 SUPERFAMILY SSF53850 23 243 6.45E-59 T 15-10-2018 THII_3028 fa039a4e83186aff24c5730b6725707b 247 Pfam PF13531 Bacterial extracellular solute-binding protein 25 242 2.0E-43 T 15-10-2018 THII_3028 fa039a4e83186aff24c5730b6725707b 247 PIRSF PIRSF004846 3 246 4.2E-50 T 15-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 THII_3028 fa039a4e83186aff24c5730b6725707b 247 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 29 241 3.9E-68 T 15-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 THII_3028 fa039a4e83186aff24c5730b6725707b 247 Gene3D G3DSA:3.40.190.10 28 242 2.0E-77 T 15-10-2018 THII_3028 fa039a4e83186aff24c5730b6725707b 247 Gene3D G3DSA:3.40.190.10 103 204 2.0E-77 T 15-10-2018 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Gene3D G3DSA:3.30.450.40 308 471 2.0E-6 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Gene3D G3DSA:3.30.565.10 648 821 1.0E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 SMART SM00448 877 987 1.3E-18 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 SMART SM00448 1145 1259 2.4E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 SMART SM00388 581 649 5.1E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Gene3D G3DSA:3.40.50.12740 878 1129 1.7E-37 T 15-10-2018 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Gene3D G3DSA:3.40.50.12740 1144 1265 3.1E-44 T 15-10-2018 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 SUPERFAMILY SSF47384 568 650 2.35E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 SUPERFAMILY SSF52172 1000 1109 9.53E-9 T 15-10-2018 IPR011006 CheY-like superfamily THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 177 5.3E-16 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 697 819 2.6E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Pfam PF00072 Response regulator receiver domain 1147 1258 8.5E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Pfam PF00072 Response regulator receiver domain 879 986 1.4E-17 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Pfam PF00072 Response regulator receiver domain 1004 1087 9.0E-8 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 PRINTS PR00344 Bacterial sensor protein C-terminal signature 804 817 1.8E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 PRINTS PR00344 Bacterial sensor protein C-terminal signature 763 773 1.8E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 PRINTS PR00344 Bacterial sensor protein C-terminal signature 745 759 1.8E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 PRINTS PR00344 Bacterial sensor protein C-terminal signature 780 798 1.8E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 SUPERFAMILY SSF55874 638 818 2.88E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 SUPERFAMILY SSF52172 1145 1263 1.99E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Pfam PF00512 His Kinase A (phospho-acceptor) domain 582 649 1.5E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Gene3D G3DSA:1.10.287.130 548 647 3.4E-24 T 15-10-2018 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 SUPERFAMILY SSF52172 873 991 1.71E-24 T 15-10-2018 IPR011006 CheY-like superfamily THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 Gene3D G3DSA:1.20.1480.50 182 276 1.9E-7 T 15-10-2018 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 SUPERFAMILY SSF55781 301 468 1.28E-14 T 15-10-2018 THII_3145 b39554f3dca7b2e7d1ce548ccbf766ee 1265 SMART SM00387 696 820 7.2E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0072 536fc1ca3acd73153c9f2bda7b798c75 199 Gene3D G3DSA:2.120.10.30 121 199 5.2E-26 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_0072 536fc1ca3acd73153c9f2bda7b798c75 199 Gene3D G3DSA:2.120.10.30 20 120 7.0E-36 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_0072 536fc1ca3acd73153c9f2bda7b798c75 199 SUPERFAMILY SSF63829 19 193 2.75E-24 T 15-10-2018 THII_0072 536fc1ca3acd73153c9f2bda7b798c75 199 Pfam PF01436 NHL repeat 41 67 7.0E-6 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_0072 536fc1ca3acd73153c9f2bda7b798c75 199 Pfam PF01436 NHL repeat 97 122 5.3E-6 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 Gene3D G3DSA:2.60.40.2030 388 528 2.7E-30 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 Pfam PF03797 Autotransporter beta-domain 661 927 3.6E-49 T 15-10-2018 IPR005546 Autotransporter beta-domain THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 SUPERFAMILY SSF141072 393 519 1.57E-30 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 SUPERFAMILY SSF141072 283 390 6.28E-23 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 662 948 1.1E-16 T 15-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 Pfam PF03160 Calx-beta domain 276 369 2.7E-16 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 Pfam PF03160 Calx-beta domain 384 481 7.0E-21 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 SMART SM00237 270 370 1.1E-17 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 SMART SM00237 382 482 3.8E-26 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 Gene3D G3DSA:2.60.40.2030 281 387 3.7E-23 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 SMART SM00869 658 937 2.1E-35 T 15-10-2018 IPR005546 Autotransporter beta-domain THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 Gene3D G3DSA:2.40.128.130 637 948 2.3E-57 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily THII_1007 8d3ab22e087f009a387d50d8f5105e12 948 SUPERFAMILY SSF103515 654 948 1.83E-43 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily THII_3232 df5e70b07b4941aed16777aa043ff143 180 Pfam PF01713 Smr domain 97 178 1.7E-21 T 15-10-2018 IPR002625 Smr domain THII_3232 df5e70b07b4941aed16777aa043ff143 180 SUPERFAMILY SSF160443 95 178 4.18E-18 T 15-10-2018 IPR036063 Smr domain superfamily THII_3232 df5e70b07b4941aed16777aa043ff143 180 Gene3D G3DSA:3.30.1370.110 49 180 4.1E-43 T 15-10-2018 THII_3232 df5e70b07b4941aed16777aa043ff143 180 SMART SM00463 94 178 9.7E-10 T 15-10-2018 IPR002625 Smr domain THII_0947 2e32f133a815f856af6d0351899cdbaf 239 SMART SM00287 170 239 0.006 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type THII_0947 2e32f133a815f856af6d0351899cdbaf 239 SMART SM00287 30 99 0.73 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type THII_0947 2e32f133a815f856af6d0351899cdbaf 239 Pfam PF01476 LysM domain 121 163 9.2E-12 T 15-10-2018 IPR018392 LysM domain THII_0947 2e32f133a815f856af6d0351899cdbaf 239 Gene3D G3DSA:3.10.350.10 103 168 1.2E-13 T 15-10-2018 IPR036779 LysM domain superfamily THII_0947 2e32f133a815f856af6d0351899cdbaf 239 Gene3D G3DSA:2.30.30.40 172 238 2.8E-12 T 15-10-2018 THII_0947 2e32f133a815f856af6d0351899cdbaf 239 Gene3D G3DSA:2.30.30.40 30 99 2.0E-10 T 15-10-2018 THII_0947 2e32f133a815f856af6d0351899cdbaf 239 SMART SM00257 120 164 2.1E-13 T 15-10-2018 IPR018392 LysM domain THII_0947 2e32f133a815f856af6d0351899cdbaf 239 SUPERFAMILY SSF54106 120 164 1.96E-9 T 15-10-2018 THII_0947 2e32f133a815f856af6d0351899cdbaf 239 Pfam PF08239 Bacterial SH3 domain 181 236 1.3E-10 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 Pfam PF00672 HAMP domain 360 406 1.7E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 Pfam PF08376 Nitrate and nitrite sensing 58 321 2.2E-15 T 15-10-2018 IPR013587 Nitrate/nitrite sensing protein THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 SMART SM00283 634 881 5.4E-74 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 Gene3D G3DSA:1.10.287.950 588 883 8.3E-72 T 15-10-2018 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 Gene3D G3DSA:1.20.1480.50 316 417 5.5E-10 T 15-10-2018 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 SUPERFAMILY SSF58104 601 882 6.37E-61 T 15-10-2018 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 693 849 3.2E-46 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 761 790 1.1E-37 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 809 838 1.1E-37 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 732 759 1.1E-37 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 340 365 1.1E-37 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 Gene3D G3DSA:3.30.450.20 418 537 3.1E-21 T 15-10-2018 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 SMART SM00304 359 411 2.9E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 SMART SM00304 633 686 97.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2447 71783b88d94d7f5f90888d8b27b8b72c 891 SUPERFAMILY SSF158472 361 408 5.49E-7 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SUPERFAMILY SSF50249 429 543 1.34E-21 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SMART SM00316 19 87 5.1E-6 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SMART SM00316 103 171 3.6E-7 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SMART SM00316 275 347 5.8E-27 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SMART SM00316 362 434 3.3E-22 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SMART SM00316 449 520 3.4E-19 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SMART SM00316 190 260 1.3E-26 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Gene3D G3DSA:2.40.50.140 187 268 1.8E-26 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 PIRSF PIRSF002111 1 534 4.7E-213 T 15-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SUPERFAMILY SSF50249 103 184 4.08E-13 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SUPERFAMILY SSF50249 255 357 6.22E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SUPERFAMILY SSF50249 189 277 2.76E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Gene3D G3DSA:2.40.50.140 445 528 9.1E-19 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Gene3D G3DSA:2.40.50.140 98 184 1.6E-6 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Gene3D G3DSA:2.40.50.140 358 444 3.9E-23 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Gene3D G3DSA:2.40.50.140 269 357 3.5E-29 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SUPERFAMILY SSF50249 1 112 3.73E-20 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Pfam PF00575 S1 RNA binding domain 104 171 8.1E-11 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Pfam PF00575 S1 RNA binding domain 361 434 2.6E-20 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Pfam PF00575 S1 RNA binding domain 275 347 3.2E-21 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Pfam PF00575 S1 RNA binding domain 19 85 2.6E-6 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Pfam PF00575 S1 RNA binding domain 447 520 9.8E-15 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Pfam PF00575 S1 RNA binding domain 190 260 1.6E-20 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 Gene3D G3DSA:2.40.50.140 5 97 1.0E-17 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.4E-212 T 15-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.4E-88 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.4E-88 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.4E-88 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.4E-88 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.4E-88 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.4E-88 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.4E-88 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.4E-88 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.4E-88 T 15-10-2018 THII_0035 a25a2c8e327d036c4fd4fae3dd165cd3 559 SUPERFAMILY SSF50249 363 451 2.54E-22 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_1494 6edf64b6ec2f0386ae6088f1c7511d9a 425 SUPERFAMILY SSF53383 1 420 6.25E-125 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_1494 6edf64b6ec2f0386ae6088f1c7511d9a 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 THII_1494 6edf64b6ec2f0386ae6088f1c7511d9a 425 Gene3D G3DSA:3.40.640.10 1 285 5.7E-101 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_1494 6edf64b6ec2f0386ae6088f1c7511d9a 425 PIRSF PIRSF001434 1 424 1.8E-126 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 THII_1494 6edf64b6ec2f0386ae6088f1c7511d9a 425 Gene3D G3DSA:3.90.1150.10 289 425 1.3E-46 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_1494 6edf64b6ec2f0386ae6088f1c7511d9a 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 420 3.6E-192 T 15-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 THII_1494 6edf64b6ec2f0386ae6088f1c7511d9a 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 9.8E-137 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 THII_2024 23ed43591815d17339571dbc23c00b55 276 SUPERFAMILY SSF81296 194 261 2.18E-5 T 15-10-2018 IPR014756 Immunoglobulin E-set THII_2024 23ed43591815d17339571dbc23c00b55 276 Pfam PF14065 Protein of unknown function (DUF4255) 9 180 4.0E-37 T 15-10-2018 IPR025351 Protein of unknown function DUF4255 THII_3661 ab1f7fc78418617331be1a2e75ff3282 161 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 8 128 1.4E-38 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 THII_3661 ab1f7fc78418617331be1a2e75ff3282 161 Gene3D G3DSA:3.40.50.300 2 152 4.0E-44 T 15-10-2018 THII_3661 ab1f7fc78418617331be1a2e75ff3282 161 SUPERFAMILY SSF52540 26 128 2.6E-20 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3661 ab1f7fc78418617331be1a2e75ff3282 161 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 138 4.5E-45 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 THII_3383 12e46e95a814f6355471ef5782f5c351 908 Pfam PF13855 Leucine rich repeat 133 192 1.2E-6 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_3383 12e46e95a814f6355471ef5782f5c351 908 Pfam PF13855 Leucine rich repeat 204 262 5.2E-7 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_3383 12e46e95a814f6355471ef5782f5c351 908 SUPERFAMILY SSF49265 287 363 2.09E-10 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_3383 12e46e95a814f6355471ef5782f5c351 908 Gene3D G3DSA:3.80.10.10 20 169 5.9E-33 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3383 12e46e95a814f6355471ef5782f5c351 908 SUPERFAMILY SSF52058 20 272 6.8E-42 T 15-10-2018 THII_3383 12e46e95a814f6355471ef5782f5c351 908 Pfam PF00041 Fibronectin type III domain 287 363 5.2E-8 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_3383 12e46e95a814f6355471ef5782f5c351 908 SMART SM00060 285 368 2.3E-4 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_3383 12e46e95a814f6355471ef5782f5c351 908 Gene3D G3DSA:2.60.40.10 681 787 8.9E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3383 12e46e95a814f6355471ef5782f5c351 908 Pfam PF08263 Leucine rich repeat N-terminal domain 22 60 1.3E-5 T 15-10-2018 IPR013210 Leucine-rich repeat-containing N-terminal, plant-type THII_3383 12e46e95a814f6355471ef5782f5c351 908 Gene3D G3DSA:3.80.10.10 170 272 3.5E-23 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3383 12e46e95a814f6355471ef5782f5c351 908 Gene3D G3DSA:2.60.40.10 273 370 1.6E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2136 e6698e6b90efec37999dd961eea7e0af 648 Pfam PF02254 TrkA-N domain 485 608 1.4E-22 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 THII_2136 e6698e6b90efec37999dd961eea7e0af 648 Gene3D G3DSA:3.40.50.720 480 624 3.8E-28 T 15-10-2018 THII_2136 e6698e6b90efec37999dd961eea7e0af 648 Gene3D G3DSA:1.20.1530.20 60 457 3.6E-68 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily THII_2136 e6698e6b90efec37999dd961eea7e0af 648 SUPERFAMILY SSF51735 484 618 7.56E-21 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2136 e6698e6b90efec37999dd961eea7e0af 648 Pfam PF00999 Sodium/hydrogen exchanger family 69 448 1.1E-53 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 THII_0794 15a3cdbe11f71e763eb7fe128a0f3a71 334 SUPERFAMILY SSF53659 3 329 7.82E-101 T 15-10-2018 THII_0794 15a3cdbe11f71e763eb7fe128a0f3a71 334 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 325 2.8E-99 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 THII_0794 15a3cdbe11f71e763eb7fe128a0f3a71 334 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 323 1.2E-96 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 THII_0794 15a3cdbe11f71e763eb7fe128a0f3a71 334 Gene3D G3DSA:3.40.718.10 1 329 3.3E-122 T 15-10-2018 THII_0613 9ebcadab5f0141eb25634fa50e8c501b 130 Pfam PF02635 DsrE/DsrF-like family 1 128 1.8E-27 T 15-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein THII_0613 9ebcadab5f0141eb25634fa50e8c501b 130 SUPERFAMILY SSF75169 1 128 3.53E-39 T 15-10-2018 IPR027396 DsrEFH-like THII_0613 9ebcadab5f0141eb25634fa50e8c501b 130 Gene3D G3DSA:3.40.1260.10 1 130 1.8E-53 T 15-10-2018 IPR027396 DsrEFH-like THII_0613 9ebcadab5f0141eb25634fa50e8c501b 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 2.9E-49 T 15-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 THII_2309 a9bc2d84a457f41655989a04a1b8031d 278 SUPERFAMILY SSF55060 158 271 6.76E-33 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily THII_2309 a9bc2d84a457f41655989a04a1b8031d 278 Pfam PF08544 GHMP kinases C terminal 205 258 3.0E-5 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain THII_2309 a9bc2d84a457f41655989a04a1b8031d 278 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 268 31.287 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 THII_2309 a9bc2d84a457f41655989a04a1b8031d 278 Pfam PF00288 GHMP kinases N terminal domain 84 141 2.8E-12 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 THII_2309 a9bc2d84a457f41655989a04a1b8031d 278 PIRSF PIRSF010376 1 274 1.2E-78 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 THII_2309 a9bc2d84a457f41655989a04a1b8031d 278 Gene3D G3DSA:3.30.230.10 1 156 5.0E-53 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_2309 a9bc2d84a457f41655989a04a1b8031d 278 Gene3D G3DSA:3.30.70.890 159 275 4.1E-27 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily THII_2309 a9bc2d84a457f41655989a04a1b8031d 278 SUPERFAMILY SSF54211 2 154 1.9E-44 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_2309 a9bc2d84a457f41655989a04a1b8031d 278 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 6 270 3.1E-81 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 THII_2430 5faab164b456964ce6040304bbda459d 773 Gene3D G3DSA:1.10.290.10 260 395 3.2E-171 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 THII_2430 5faab164b456964ce6040304bbda459d 773 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 486 500 6.8E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 THII_2430 5faab164b456964ce6040304bbda459d 773 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 302 311 6.8E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 THII_2430 5faab164b456964ce6040304bbda459d 773 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 6.8E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 THII_2430 5faab164b456964ce6040304bbda459d 773 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 6.8E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 THII_2430 5faab164b456964ce6040304bbda459d 773 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 380 396 6.8E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 THII_2430 5faab164b456964ce6040304bbda459d 773 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 311 - T 15-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 THII_2430 5faab164b456964ce6040304bbda459d 773 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 712 53.629 T 15-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 THII_2430 5faab164b456964ce6040304bbda459d 773 Pfam PF01131 DNA topoisomerase 134 560 2.1E-132 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 THII_2430 5faab164b456964ce6040304bbda459d 773 SUPERFAMILY SSF57783 641 679 8.84E-10 T 15-10-2018 THII_2430 5faab164b456964ce6040304bbda459d 773 SMART SM00436 108 196 8.3E-51 T 15-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 THII_2430 5faab164b456964ce6040304bbda459d 773 SMART SM00493 3 103 1.4E-29 T 15-10-2018 IPR006171 TOPRIM domain THII_2430 5faab164b456964ce6040304bbda459d 773 Gene3D G3DSA:1.10.460.10 139 563 3.2E-171 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 THII_2430 5faab164b456964ce6040304bbda459d 773 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 687 724 2.5E-12 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 THII_2430 5faab164b456964ce6040304bbda459d 773 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 590 626 3.9E-15 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 THII_2430 5faab164b456964ce6040304bbda459d 773 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 645 681 1.5E-16 T 15-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 THII_2430 5faab164b456964ce6040304bbda459d 773 SMART SM00437 252 523 8.8E-124 T 15-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 THII_2430 5faab164b456964ce6040304bbda459d 773 SUPERFAMILY SSF56712 3 574 2.49E-191 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain THII_2430 5faab164b456964ce6040304bbda459d 773 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 624 1.0E-245 T 15-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 THII_2430 5faab164b456964ce6040304bbda459d 773 Gene3D G3DSA:3.30.65.10 576 634 4.9E-8 T 15-10-2018 THII_2430 5faab164b456964ce6040304bbda459d 773 Gene3D G3DSA:2.70.20.10 188 470 3.2E-171 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 THII_2430 5faab164b456964ce6040304bbda459d 773 Pfam PF01751 Toprim domain 5 117 1.5E-26 T 15-10-2018 IPR006171 TOPRIM domain THII_2430 5faab164b456964ce6040304bbda459d 773 Gene3D G3DSA:3.40.50.140 1 138 2.6E-49 T 15-10-2018 THII_2430 5faab164b456964ce6040304bbda459d 773 SUPERFAMILY SSF57783 588 628 2.21E-11 T 15-10-2018 THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 Pfam PF01170 Putative RNA methylase family UPF0020 166 378 3.0E-47 T 15-10-2018 IPR000241 Putative RNA methylase domain THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 SUPERFAMILY SSF53335 144 379 1.85E-38 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 310 316 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 523 692 1.2E-12 T 15-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 203 214 - T 15-10-2018 IPR000241 Putative RNA methylase domain THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 SUPERFAMILY SSF53335 422 731 7.04E-62 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 Gene3D G3DSA:3.40.50.150 510 734 5.9E-65 T 15-10-2018 THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 Gene3D G3DSA:3.30.2130.30 8 262 3.5E-139 T 15-10-2018 THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 Gene3D G3DSA:3.30.750.80 418 509 3.5E-38 T 15-10-2018 THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 Gene3D G3DSA:3.40.50.150 173 376 3.5E-139 T 15-10-2018 THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 7 735 31.624 T 15-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 SMART SM00981 60 158 7.0E-22 T 15-10-2018 IPR004114 THUMP domain GO:0003723 THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 Pfam PF02926 THUMP domain 38 157 5.9E-9 T 15-10-2018 IPR004114 THUMP domain GO:0003723 THII_1904 39eb1ecebb4b3c3b0c753a2afc3943d8 736 PIRSF PIRSF037618 2 735 4.5E-289 T 15-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 THII_1211 8c685bff2ddbf0246d9aaf97e31064bf 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1211 8c685bff2ddbf0246d9aaf97e31064bf 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 30.547 T 15-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1211 8c685bff2ddbf0246d9aaf97e31064bf 67 Gene3D G3DSA:2.30.170.50 1 67 5.2E-35 T 15-10-2018 THII_1211 8c685bff2ddbf0246d9aaf97e31064bf 67 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.3E-22 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1211 8c685bff2ddbf0246d9aaf97e31064bf 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.3E-22 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1211 8c685bff2ddbf0246d9aaf97e31064bf 67 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.3E-22 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1211 8c685bff2ddbf0246d9aaf97e31064bf 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 1.8E-36 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1211 8c685bff2ddbf0246d9aaf97e31064bf 67 SUPERFAMILY SSF143800 1 65 9.02E-29 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1211 8c685bff2ddbf0246d9aaf97e31064bf 67 Pfam PF01197 Ribosomal protein L31 1 65 3.1E-34 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0454 ce9a34d931f3888f7348d630644c1f01 149 Gene3D G3DSA:1.20.120.330 16 141 1.5E-8 T 15-10-2018 THII_0454 ce9a34d931f3888f7348d630644c1f01 149 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 71 132 1.3E-8 T 15-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 THII_0454 ce9a34d931f3888f7348d630644c1f01 149 SUPERFAMILY SSF81593 12 138 8.63E-21 T 15-10-2018 THII_2603 9e59f873aafbbb87a82aec2727fde360 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 8.9E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 THII_2603 9e59f873aafbbb87a82aec2727fde360 276 Gene3D G3DSA:1.10.3720.10 14 273 2.0E-67 T 15-10-2018 IPR035906 MetI-like superfamily THII_2603 9e59f873aafbbb87a82aec2727fde360 276 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 269 2.6E-99 T 15-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 THII_2603 9e59f873aafbbb87a82aec2727fde360 276 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 10 273 4.1E-128 T 15-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 THII_2603 9e59f873aafbbb87a82aec2727fde360 276 SUPERFAMILY SSF161098 15 265 4.02E-54 T 15-10-2018 IPR035906 MetI-like superfamily THII_2952 2f5a6d648c66938cfa9bfcf09d14e1a1 151 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 7 129 1.3E-45 T 15-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2952 2f5a6d648c66938cfa9bfcf09d14e1a1 151 SUPERFAMILY SSF54862 24 134 1.26E-24 T 15-10-2018 THII_2952 2f5a6d648c66938cfa9bfcf09d14e1a1 151 Pfam PF12838 4Fe-4S dicluster domain 50 104 2.9E-11 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2952 2f5a6d648c66938cfa9bfcf09d14e1a1 151 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 135 27.414 T 15-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2952 2f5a6d648c66938cfa9bfcf09d14e1a1 151 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2952 2f5a6d648c66938cfa9bfcf09d14e1a1 151 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2952 2f5a6d648c66938cfa9bfcf09d14e1a1 151 Gene3D G3DSA:3.30.70.3270 24 150 1.1E-39 T 15-10-2018 THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 Pfam PF00970 Oxidoreductase FAD-binding domain 271 363 1.2E-6 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 SUPERFAMILY SSF52343 354 489 1.23E-17 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 Gene3D G3DSA:2.40.30.10 267 365 1.1E-17 T 15-10-2018 THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 203 211 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 Gene3D G3DSA:3.40.50.80 366 492 2.1E-11 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 PRINTS PR00410 Phenol hydroxylase reductase family signature 461 469 1.2E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 PRINTS PR00410 Phenol hydroxylase reductase family signature 374 393 1.2E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 367 1.2E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 PRINTS PR00410 Phenol hydroxylase reductase family signature 298 310 1.2E-7 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 SUPERFAMILY SSF54292 159 260 2.49E-19 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 SUPERFAMILY SSF63380 268 364 1.38E-15 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 183 244 2.7E-9 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 THII_1303 0235bf97e18f28ce4eeab71b6ce2f850 494 Gene3D G3DSA:3.10.20.30 147 264 2.3E-17 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 SUPERFAMILY SSF81301 31 300 1.57E-82 T 15-10-2018 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 SUPERFAMILY SSF81593 834 954 6.12E-23 T 15-10-2018 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 42 963 18.714 T 15-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 Gene3D G3DSA:1.10.4050.10 12 123 6.2E-18 T 15-10-2018 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 Gene3D G3DSA:3.30.460.10 126 298 1.8E-62 T 15-10-2018 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 Gene3D G3DSA:3.30.460.100 578 830 3.8E-84 T 15-10-2018 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 568 824 2.0E-83 T 15-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 46 286 2.8E-84 T 15-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 Gene3D G3DSA:1.20.120.1510 464 577 7.8E-28 T 15-10-2018 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 Gene3D G3DSA:1.20.120.330 299 453 3.2E-53 T 15-10-2018 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 Pfam PF08335 GlnD PII-uridylyltransferase 311 450 9.8E-45 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 Pfam PF08335 GlnD PII-uridylyltransferase 846 938 1.6E-5 T 15-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 Gene3D G3DSA:1.20.120.330 831 963 3.4E-37 T 15-10-2018 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 SUPERFAMILY SSF81593 301 450 6.67E-42 T 15-10-2018 THII_2289 9d153a0811300fc038d51d3718dbbbc0 963 SUPERFAMILY SSF81301 542 834 2.03E-77 T 15-10-2018 THII_2933 a47c50b3ba06cf69171fe9f0e91ab5b1 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.051 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2933 a47c50b3ba06cf69171fe9f0e91ab5b1 287 SUPERFAMILY SSF52943 2 287 1.7E-96 T 15-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2933 a47c50b3ba06cf69171fe9f0e91ab5b1 287 Gene3D G3DSA:3.40.1380.10 61 206 1.4E-108 T 15-10-2018 THII_2933 a47c50b3ba06cf69171fe9f0e91ab5b1 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 3.7E-38 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2933 a47c50b3ba06cf69171fe9f0e91ab5b1 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 3.7E-38 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2933 a47c50b3ba06cf69171fe9f0e91ab5b1 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.7E-38 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2933 a47c50b3ba06cf69171fe9f0e91ab5b1 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.7E-38 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2933 a47c50b3ba06cf69171fe9f0e91ab5b1 287 Gene3D G3DSA:1.10.287.80 6 283 1.4E-108 T 15-10-2018 THII_2933 a47c50b3ba06cf69171fe9f0e91ab5b1 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 9.2E-108 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2933 a47c50b3ba06cf69171fe9f0e91ab5b1 287 Pfam PF00231 ATP synthase 5 286 1.5E-96 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2933 a47c50b3ba06cf69171fe9f0e91ab5b1 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 15-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2866 76f716a26effb9c7752c958cfd32a0cc 382 SUPERFAMILY SSF101898 18 346 1.86E-28 T 15-10-2018 THII_2866 76f716a26effb9c7752c958cfd32a0cc 382 Gene3D G3DSA:2.120.10.30 208 289 6.0E-21 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_2866 76f716a26effb9c7752c958cfd32a0cc 382 Gene3D G3DSA:2.120.10.30 291 382 1.9E-19 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_2866 76f716a26effb9c7752c958cfd32a0cc 382 Gene3D G3DSA:2.120.10.30 30 156 2.8E-28 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_1256 3f23f96d17d518346274ea62851400f0 174 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 21 167 6.0E-37 T 15-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 THII_1256 3f23f96d17d518346274ea62851400f0 174 Gene3D G3DSA:2.60.450.10 24 171 1.6E-36 T 15-10-2018 THII_1256 3f23f96d17d518346274ea62851400f0 174 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 167 21.388 T 15-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 THII_1256 3f23f96d17d518346274ea62851400f0 174 Pfam PF03968 OstA-like protein 31 146 8.4E-23 T 15-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal THII_3481 637fef191b78763712b93d91633f3913 226 Gene3D G3DSA:3.40.50.300 3 215 3.5E-65 T 15-10-2018 THII_3481 637fef191b78763712b93d91633f3913 226 SUPERFAMILY SSF52540 1 208 7.38E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3481 637fef191b78763712b93d91633f3913 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 208 29.366 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 THII_3481 637fef191b78763712b93d91633f3913 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 1.7E-51 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 THII_3481 637fef191b78763712b93d91633f3913 226 PIRSF PIRSF006755 1 225 3.4E-72 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 THII_3481 637fef191b78763712b93d91633f3913 226 Pfam PF13500 AAA domain 6 207 1.9E-45 T 15-10-2018 THII_0655 aa1f59542c8218d44173a31eaea8e516 538 SUPERFAMILY SSF53335 17 165 2.39E-28 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0655 aa1f59542c8218d44173a31eaea8e516 538 Gene3D G3DSA:3.40.50.150 7 252 6.2E-23 T 15-10-2018 THII_0655 aa1f59542c8218d44173a31eaea8e516 538 Pfam PF13847 Methyltransferase domain 40 171 2.7E-17 T 15-10-2018 IPR025714 Methyltransferase domain THII_0655 aa1f59542c8218d44173a31eaea8e516 538 Pfam PF10119 Predicted methyltransferase regulatory domain 213 291 2.1E-17 T 15-10-2018 IPR018773 Methyltransferase regulatory domain, predicted THII_2525 e046404496bd56c3ce891124314fec09 1739 SUPERFAMILY SSF52058 42 205 8.08E-35 T 15-10-2018 THII_2525 e046404496bd56c3ce891124314fec09 1739 Pfam PF13855 Leucine rich repeat 83 141 1.3E-7 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_2525 e046404496bd56c3ce891124314fec09 1739 Gene3D G3DSA:2.60.40.10 477 574 6.9E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2525 e046404496bd56c3ce891124314fec09 1739 Gene3D G3DSA:2.60.40.10 695 795 4.9E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2525 e046404496bd56c3ce891124314fec09 1739 Pfam PF08263 Leucine rich repeat N-terminal domain 40 79 1.9E-5 T 15-10-2018 IPR013210 Leucine-rich repeat-containing N-terminal, plant-type THII_2525 e046404496bd56c3ce891124314fec09 1739 Gene3D G3DSA:3.80.10.10 34 217 1.7E-43 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 Gene3D G3DSA:3.30.479.20 56 145 6.4E-26 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 290 4.9E-105 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 SUPERFAMILY SSF54713 150 290 2.09E-51 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 SUPERFAMILY SSF46934 1 55 1.53E-18 T 15-10-2018 IPR009060 UBA-like superfamily GO:0005515 THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 Gene3D G3DSA:1.10.286.20 191 237 1.8E-43 T 15-10-2018 THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 Gene3D G3DSA:1.10.8.10 1 55 1.3E-25 T 15-10-2018 THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 SUPERFAMILY SSF54713 55 144 6.93E-22 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 Pfam PF00889 Elongation factor TS 71 272 8.2E-69 T 15-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 76.038 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 THII_1746 b42ab6d153b83ba5e830ed44de886b8b 293 Gene3D G3DSA:3.30.479.20 155 271 1.8E-43 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 THII_2717 7c45f4bbd6fca246029f2797e9196191 145 Gene3D G3DSA:3.90.79.10 1 145 6.1E-32 T 15-10-2018 THII_2717 7c45f4bbd6fca246029f2797e9196191 145 Pfam PF00293 NUDIX domain 5 117 1.6E-8 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 THII_2717 7c45f4bbd6fca246029f2797e9196191 145 SUPERFAMILY SSF55811 2 138 2.03E-23 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 THII_3480 20f5f0b246a6b3a0db83c8e8afd8fba5 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 18 379 1.1E-150 T 15-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 THII_3480 20f5f0b246a6b3a0db83c8e8afd8fba5 383 Gene3D G3DSA:3.40.640.10 55 285 1.6E-139 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_3480 20f5f0b246a6b3a0db83c8e8afd8fba5 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 234 243 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 THII_3480 20f5f0b246a6b3a0db83c8e8afd8fba5 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 1 383 48.937 T 15-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 THII_3480 20f5f0b246a6b3a0db83c8e8afd8fba5 383 Gene3D G3DSA:3.90.1150.10 39 376 1.6E-139 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_3480 20f5f0b246a6b3a0db83c8e8afd8fba5 383 SUPERFAMILY SSF53383 3 383 3.76E-111 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_3480 20f5f0b246a6b3a0db83c8e8afd8fba5 383 Pfam PF00155 Aminotransferase class I and II 40 378 6.2E-64 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 THII_0372 5ea33a46c4108624b948981b605f0d41 313 SUPERFAMILY SSF52980 60 299 9.65E-7 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0369 934bcfd16e0e90dc0917a38e66da0c50 308 Pfam PF12644 Protein of unknown function (DUF3782) 150 226 2.5E-17 T 15-10-2018 IPR024271 Protein of unknown function DUF3782 THII_0369 934bcfd16e0e90dc0917a38e66da0c50 308 Pfam PF07788 PD-(D/E)XK nuclease superfamily 227 296 5.2E-26 T 15-10-2018 IPR012431 PD-(D/E)XK nuclease THII_0436 37925948c133055683f96fa11e28f811 497 Gene3D G3DSA:3.40.50.720 2 175 4.5E-45 T 15-10-2018 THII_0436 37925948c133055683f96fa11e28f811 497 Gene3D G3DSA:3.30.360.10 176 488 1.9E-120 T 15-10-2018 THII_0436 37925948c133055683f96fa11e28f811 497 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 8 187 2.6E-55 T 15-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 THII_0436 37925948c133055683f96fa11e28f811 497 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 4 487 7.7E-173 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 THII_0436 37925948c133055683f96fa11e28f811 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 143 156 1.5E-44 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 THII_0436 37925948c133055683f96fa11e28f811 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 237 253 1.5E-44 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 THII_0436 37925948c133055683f96fa11e28f811 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 328 354 1.5E-44 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 THII_0436 37925948c133055683f96fa11e28f811 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 219 236 1.5E-44 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 THII_0436 37925948c133055683f96fa11e28f811 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 167 195 1.5E-44 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 THII_0436 37925948c133055683f96fa11e28f811 497 SUPERFAMILY SSF55347 177 488 1.21E-109 T 15-10-2018 THII_0436 37925948c133055683f96fa11e28f811 497 SUPERFAMILY SSF51735 3 190 3.54E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0436 37925948c133055683f96fa11e28f811 497 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 189 486 9.5E-113 T 15-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 THII_0436 37925948c133055683f96fa11e28f811 497 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 4 487 77.644 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 THII_0436 37925948c133055683f96fa11e28f811 497 PIRSF PIRSF000110 1 489 5.1E-170 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 THII_1276 4608e0e5234a3370ff3237138d1a98fe 195 SUPERFAMILY SSF53697 4 193 8.29E-51 T 15-10-2018 THII_1276 4608e0e5234a3370ff3237138d1a98fe 195 Pfam PF13580 SIS domain 11 146 7.4E-30 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 THII_1276 4608e0e5234a3370ff3237138d1a98fe 195 Gene3D G3DSA:3.40.50.10490 1 195 5.2E-72 T 15-10-2018 THII_1276 4608e0e5234a3370ff3237138d1a98fe 195 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 35.546 T 15-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 SUPERFAMILY SSF54980 398 512 1.29E-27 T 15-10-2018 IPR035647 EF-G domain III/V-like THII_3418 71593a267264a7ceccbf3385d6a8d257 605 Pfam PF00679 Elongation factor G C-terminus 395 477 1.9E-22 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like THII_3418 71593a267264a7ceccbf3385d6a8d257 605 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.2E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 PRINTS PR00315 GTP-binding elongation factor signature 87 98 2.2E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.2E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.2E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.2E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 3.5E-25 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 Gene3D G3DSA:3.40.50.300 1 198 4.8E-64 T 15-10-2018 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 SMART SM00838 395 484 0.0022 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like THII_3418 71593a267264a7ceccbf3385d6a8d257 605 Gene3D G3DSA:3.30.70.870 306 590 4.6E-131 T 15-10-2018 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 SUPERFAMILY SSF54980 302 387 3.38E-16 T 15-10-2018 IPR035647 EF-G domain III/V-like THII_3418 71593a267264a7ceccbf3385d6a8d257 605 Gene3D G3DSA:3.30.70.240 389 482 4.6E-131 T 15-10-2018 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 7.7E-285 T 15-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 Pfam PF03144 Elongation factor Tu domain 2 219 289 3.6E-10 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 SUPERFAMILY SSF50447 182 300 1.3E-28 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_3418 71593a267264a7ceccbf3385d6a8d257 605 SUPERFAMILY SSF52540 4 219 6.31E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3418 71593a267264a7ceccbf3385d6a8d257 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site THII_3418 71593a267264a7ceccbf3385d6a8d257 605 Gene3D G3DSA:2.40.50.250 483 599 4.6E-131 T 15-10-2018 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 3.2E-54 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_3418 71593a267264a7ceccbf3385d6a8d257 605 Gene3D G3DSA:2.40.30.10 199 299 2.2E-32 T 15-10-2018 THII_1150 4a7139e587a06c7546156a59ac3b4916 385 Pfam PF09626 Dihaem cytochrome c 244 364 5.1E-36 T 15-10-2018 IPR018588 Dihaem cytochrome c THII_1150 4a7139e587a06c7546156a59ac3b4916 385 SUPERFAMILY SSF81342 7 188 1.88E-31 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 THII_1150 4a7139e587a06c7546156a59ac3b4916 385 Gene3D G3DSA:1.20.950.20 1 175 8.1E-17 T 15-10-2018 THII_1150 4a7139e587a06c7546156a59ac3b4916 385 Pfam PF01292 Prokaryotic cytochrome b561 12 185 8.7E-24 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 THII_3606 8881ebca3907f12811cbc46c49ff0b55 346 Pfam PF14281 PD-(D/E)XK nuclease superfamily 37 144 9.7E-5 T 15-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 THII_2288 3ce498660c5e6acaa44e4f4b0194eba2 280 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 274 45.141 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 THII_2288 3ce498660c5e6acaa44e4f4b0194eba2 280 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 270 1.1E-91 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 THII_2288 3ce498660c5e6acaa44e4f4b0194eba2 280 PIRSF PIRSF000903 1 277 9.4E-109 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 THII_2288 3ce498660c5e6acaa44e4f4b0194eba2 280 Gene3D G3DSA:3.60.21.10 1 276 1.8E-76 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like THII_2288 3ce498660c5e6acaa44e4f4b0194eba2 280 SUPERFAMILY SSF56300 1 265 1.67E-56 T 15-10-2018 THII_2288 3ce498660c5e6acaa44e4f4b0194eba2 280 Pfam PF00149 Calcineurin-like phosphoesterase 3 154 6.1E-16 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 THII_0410 38ed93c82caf897501797cff0252d007 444 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 23 206 1.7E-56 T 15-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 THII_0410 38ed93c82caf897501797cff0252d007 444 SMART SM00977 367 438 2.4E-17 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 THII_0410 38ed93c82caf897501797cff0252d007 444 SUPERFAMILY SSF82829 236 323 3.27E-22 T 15-10-2018 THII_0410 38ed93c82caf897501797cff0252d007 444 Gene3D G3DSA:3.40.50.620 15 235 2.8E-72 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0410 38ed93c82caf897501797cff0252d007 444 Gene3D G3DSA:1.20.59.20 236 322 3.1E-20 T 15-10-2018 THII_0410 38ed93c82caf897501797cff0252d007 444 SUPERFAMILY SSF52402 13 235 2.65E-62 T 15-10-2018 THII_0410 38ed93c82caf897501797cff0252d007 444 SUPERFAMILY SSF56037 329 440 6.54E-23 T 15-10-2018 THII_0410 38ed93c82caf897501797cff0252d007 444 Pfam PF11734 TilS substrate C-terminal domain 367 438 1.3E-18 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 THII_0410 38ed93c82caf897501797cff0252d007 444 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 367 411 2.0E-12 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 THII_0410 38ed93c82caf897501797cff0252d007 444 Pfam PF01171 PP-loop family 24 203 8.6E-60 T 15-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 THII_0410 38ed93c82caf897501797cff0252d007 444 Pfam PF09179 TilS substrate binding domain 252 318 5.1E-18 T 15-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 THII_0410 38ed93c82caf897501797cff0252d007 444 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 15 311 24.27 T 15-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 Gene3D G3DSA:2.130.10.10 39 143 2.2E-39 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 201 215 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 Gene3D G3DSA:2.130.10.10 144 220 1.4E-37 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 Gene3D G3DSA:2.130.10.10 221 340 3.2E-55 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 159 173 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 Pfam PF00400 WD domain, G-beta repeat 260 297 3.3E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 Pfam PF00400 WD domain, G-beta repeat 218 256 1.2E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 Pfam PF00400 WD domain, G-beta repeat 302 339 6.0E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 Pfam PF00400 WD domain, G-beta repeat 134 172 1.7E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 Pfam PF00400 WD domain, G-beta repeat 92 129 3.6E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 Pfam PF00400 WD domain, G-beta repeat 177 214 6.0E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 Pfam PF00400 WD domain, G-beta repeat 51 88 2.2E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 PRINTS PR00320 G protein beta WD-40 repeat signature 201 215 1.0E-9 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 PRINTS PR00320 G protein beta WD-40 repeat signature 243 257 1.0E-9 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 PRINTS PR00320 G protein beta WD-40 repeat signature 285 299 1.0E-9 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 285 299 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 117 131 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 SMART SM00320 175 214 1.2E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 SMART SM00320 91 130 5.6E-12 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 SMART SM00320 217 256 2.8E-15 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 SMART SM00320 301 340 1.8E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 SMART SM00320 49 88 1.1E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 SMART SM00320 259 298 5.7E-14 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 SMART SM00320 133 172 4.2E-12 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 SUPERFAMILY SSF50978 47 340 9.3E-119 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 PIRSF PIRSF002394 29 340 1.8E-84 T 15-10-2018 THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 75 89 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0212 b0a36b98ea2255594c19ca1feda1aa10 340 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 243 257 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_2811 cafc5fea437f9be574527012cd0d6f8b 155 Gene3D G3DSA:2.40.280.10 4 132 1.2E-46 T 15-10-2018 IPR023620 Small protein B THII_2811 cafc5fea437f9be574527012cd0d6f8b 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 72.161 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 THII_2811 cafc5fea437f9be574527012cd0d6f8b 155 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 15-10-2018 IPR020081 SsrA-binding protein, conserved site THII_2811 cafc5fea437f9be574527012cd0d6f8b 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 154 3.9E-52 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 THII_2811 cafc5fea437f9be574527012cd0d6f8b 155 Pfam PF01668 SmpB protein 12 154 3.5E-58 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 THII_2811 cafc5fea437f9be574527012cd0d6f8b 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 136 3.0E-48 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 THII_2811 cafc5fea437f9be574527012cd0d6f8b 155 SUPERFAMILY SSF74982 5 136 5.75E-50 T 15-10-2018 IPR023620 Small protein B THII_1718 d41ad9a043f0d65d378755ed4219ed82 178 SUPERFAMILY SSF55144 8 177 3.84E-38 T 15-10-2018 IPR009097 Cyclic phosphodiesterase THII_1718 d41ad9a043f0d65d378755ed4219ed82 178 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 7 177 21.011 T 15-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 THII_1718 d41ad9a043f0d65d378755ed4219ed82 178 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 8 177 1.8E-38 T 15-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 THII_1718 d41ad9a043f0d65d378755ed4219ed82 178 Pfam PF13563 2'-5' RNA ligase superfamily 39 159 1.3E-10 T 15-10-2018 THII_1718 d41ad9a043f0d65d378755ed4219ed82 178 Gene3D G3DSA:3.90.1140.10 3 178 4.1E-47 T 15-10-2018 THII_3671 8c33e138c66642c1b752ea890cf3374e 129 Pfam PF13586 Transposase DDE domain 43 128 3.1E-12 T 15-10-2018 IPR025668 Transposase DDE domain THII_1244 4f4e5c4f7ccb0a730f7727a10a7c58d8 759 Gene3D G3DSA:3.30.450.20 220 345 1.1E-5 T 15-10-2018 THII_1244 4f4e5c4f7ccb0a730f7727a10a7c58d8 759 Gene3D G3DSA:3.30.450.40 577 748 1.6E-13 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_1244 4f4e5c4f7ccb0a730f7727a10a7c58d8 759 SUPERFAMILY SSF158472 379 430 5.89E-10 T 15-10-2018 THII_1244 4f4e5c4f7ccb0a730f7727a10a7c58d8 759 SMART SM00304 469 521 77.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1244 4f4e5c4f7ccb0a730f7727a10a7c58d8 759 SMART SM00304 378 431 4.3E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1244 4f4e5c4f7ccb0a730f7727a10a7c58d8 759 SMART SM00065 590 737 8.4E-4 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1244 4f4e5c4f7ccb0a730f7727a10a7c58d8 759 Pfam PF00672 HAMP domain 379 427 2.4E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1244 4f4e5c4f7ccb0a730f7727a10a7c58d8 759 Pfam PF13185 GAF domain 594 727 3.3E-11 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1244 4f4e5c4f7ccb0a730f7727a10a7c58d8 759 SUPERFAMILY SSF55781 555 728 1.34E-22 T 15-10-2018 THII_1244 4f4e5c4f7ccb0a730f7727a10a7c58d8 759 Pfam PF02743 Cache domain 65 339 5.9E-15 T 15-10-2018 IPR033479 Double Cache domain 1 THII_1244 4f4e5c4f7ccb0a730f7727a10a7c58d8 759 Gene3D G3DSA:1.20.1480.50 346 437 5.7E-16 T 15-10-2018 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 Pfam PF04073 Aminoacyl-tRNA editing domain 257 375 4.3E-29 T 15-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 SUPERFAMILY SSF55681 10 474 1.22E-108 T 15-10-2018 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 Gene3D G3DSA:3.40.50.800 4 550 4.1E-244 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 566 42.301 T 15-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 6.1E-50 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 SUPERFAMILY SSF52954 460 564 9.98E-31 T 15-10-2018 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.8E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.8E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.8E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.8E-19 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 Pfam PF03129 Anticodon binding domain 472 564 4.2E-19 T 15-10-2018 IPR004154 Anticodon-binding THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 Gene3D G3DSA:3.90.960.10 240 385 4.1E-244 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 SUPERFAMILY SSF55826 218 386 1.96E-32 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 564 7.7E-244 T 15-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 PIRSF PIRSF001535 1 566 3.9E-273 T 15-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 THII_3484 e50bde2b41874a0935e948c42e77fc0e 566 Gene3D G3DSA:3.30.930.10 11 461 4.1E-244 T 15-10-2018 THII_1760 48dbd4675e6aaf099ae76bdf9a7e982f 251 SUPERFAMILY SSF53850 25 246 1.56E-33 T 15-10-2018 THII_1760 48dbd4675e6aaf099ae76bdf9a7e982f 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 246 1.9E-17 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_1760 48dbd4675e6aaf099ae76bdf9a7e982f 251 Gene3D G3DSA:3.40.190.10 30 245 1.6E-24 T 15-10-2018 THII_1760 48dbd4675e6aaf099ae76bdf9a7e982f 251 Gene3D G3DSA:3.40.190.10 105 205 1.6E-24 T 15-10-2018 THII_2173 8373577d4bcf8807114f36514b88335e 476 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 18 433 9.2E-96 T 15-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 THII_2173 8373577d4bcf8807114f36514b88335e 476 SUPERFAMILY SSF56954 2 422 4.19E-83 T 15-10-2018 THII_2173 8373577d4bcf8807114f36514b88335e 476 Pfam PF02321 Outer membrane efflux protein 22 209 2.5E-23 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 THII_2173 8373577d4bcf8807114f36514b88335e 476 Pfam PF02321 Outer membrane efflux protein 233 419 3.2E-30 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 THII_2173 8373577d4bcf8807114f36514b88335e 476 Gene3D G3DSA:1.20.1600.10 20 439 7.5E-111 T 15-10-2018 THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 Pfam PF13932 GidA associated domain 402 613 6.9E-77 T 15-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 618 1.3E-276 T 15-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 621 42.656 T 15-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 Pfam PF01134 Glucose inhibited division protein A 8 398 8.3E-166 T 15-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 Gene3D G3DSA:3.50.50.60 2 235 3.7E-88 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 Gene3D G3DSA:3.50.50.60 302 458 2.1E-59 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 SMART SM01228 543 614 3.0E-40 T 15-10-2018 THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 SUPERFAMILY SSF51905 6 261 2.34E-50 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 Gene3D G3DSA:1.10.150.570 566 619 1.2E-23 T 15-10-2018 THII_3765 0c988d8ed5279a52afb38a06caedc4e0 647 Gene3D G3DSA:1.10.10.1800 459 547 2.5E-18 T 15-10-2018 THII_3906 3adf84b323fd556897af79d6a9b9f9c6 217 Gene3D G3DSA:3.40.50.620 6 216 1.1E-60 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3906 3adf84b323fd556897af79d6a9b9f9c6 217 Pfam PF01467 Cytidylyltransferase-like 13 190 1.3E-26 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 THII_3906 3adf84b323fd556897af79d6a9b9f9c6 217 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 9 217 30.59 T 15-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 THII_3906 3adf84b323fd556897af79d6a9b9f9c6 217 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 11 70 6.9E-9 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 THII_3906 3adf84b323fd556897af79d6a9b9f9c6 217 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 13 216 1.1E-49 T 15-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 THII_3906 3adf84b323fd556897af79d6a9b9f9c6 217 SUPERFAMILY SSF52374 10 216 2.17E-51 T 15-10-2018 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 Gene3D G3DSA:1.10.510.10 91 276 1.6E-40 T 15-10-2018 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 Gene3D G3DSA:1.10.287.130 1503 1597 8.5E-21 T 15-10-2018 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 Pfam PF13191 AAA ATPase domain 298 486 9.9E-44 T 15-10-2018 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 SMART SM00387 1647 1759 3.3E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 Gene3D G3DSA:3.30.450.40 1293 1502 2.2E-36 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1705 1715 9.1E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1743 1756 9.1E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1718 1736 9.1E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1687 1701 9.1E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1650 1757 5.7E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 Pfam PF00069 Protein kinase domain 10 257 2.8E-40 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 SUPERFAMILY SSF56112 3 275 1.04E-56 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 SMART SM00065 1339 1489 9.7E-15 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 SUPERFAMILY SSF55781 1324 1493 3.93E-25 T 15-10-2018 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 Gene3D G3DSA:3.30.200.20 3 88 1.8E-5 T 15-10-2018 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 Pfam PF01590 GAF domain 1340 1479 4.5E-15 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1521 1595 7.8E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 Gene3D G3DSA:3.30.565.10 1598 1757 2.9E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 SUPERFAMILY SSF47384 1516 1594 6.28E-5 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 SUPERFAMILY SSF52540 295 575 4.89E-19 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 SUPERFAMILY SSF55874 1604 1757 9.3E-34 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1454 a1b7da34095a98dc359bb3e29c2974e8 1761 Gene3D G3DSA:3.40.50.300 291 487 2.1E-11 T 15-10-2018 THII_0899 6eb7abf7c513ea4b760b5b81fe23f786 596 SUPERFAMILY SSF52540 295 516 1.21E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0899 6eb7abf7c513ea4b760b5b81fe23f786 596 Gene3D G3DSA:3.40.50.300 291 478 6.4E-13 T 15-10-2018 THII_2435 a5fb03fed38e5b30948c31f600c78600 855 Pfam PF00691 OmpA family 745 844 1.9E-15 T 15-10-2018 IPR006665 OmpA-like domain THII_2435 a5fb03fed38e5b30948c31f600c78600 855 PRINTS PR01021 OMPA domain signature 778 793 4.4E-8 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_2435 a5fb03fed38e5b30948c31f600c78600 855 PRINTS PR01021 OMPA domain signature 746 768 4.4E-8 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_2435 a5fb03fed38e5b30948c31f600c78600 855 PRINTS PR01021 OMPA domain signature 793 809 4.4E-8 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_2435 a5fb03fed38e5b30948c31f600c78600 855 Pfam PF13768 von Willebrand factor type A domain 324 473 3.0E-21 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_2435 a5fb03fed38e5b30948c31f600c78600 855 SUPERFAMILY SSF103088 737 850 3.66E-25 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_2435 a5fb03fed38e5b30948c31f600c78600 855 Gene3D G3DSA:3.30.1330.60 724 854 5.0E-28 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_2435 a5fb03fed38e5b30948c31f600c78600 855 Gene3D G3DSA:3.40.50.410 323 494 1.7E-31 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_2435 a5fb03fed38e5b30948c31f600c78600 855 Pfam PF08487 Vault protein inter-alpha-trypsin domain 57 167 4.7E-37 T 15-10-2018 IPR013694 VIT domain THII_2435 a5fb03fed38e5b30948c31f600c78600 855 SUPERFAMILY SSF53300 322 492 1.24E-28 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_2435 a5fb03fed38e5b30948c31f600c78600 855 SMART SM00327 322 496 4.7E-20 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_2435 a5fb03fed38e5b30948c31f600c78600 855 SMART SM00609 44 169 1.3E-13 T 15-10-2018 IPR013694 VIT domain THII_0648 09f914933247c34595db3cd76f72df4e 167 Gene3D G3DSA:3.40.50.2020 3 160 3.2E-39 T 15-10-2018 THII_0648 09f914933247c34595db3cd76f72df4e 167 Pfam PF00156 Phosphoribosyl transferase domain 11 135 2.2E-17 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 THII_0648 09f914933247c34595db3cd76f72df4e 167 SUPERFAMILY SSF53271 19 151 5.51E-33 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like THII_3962 b507b022813f2e366726a5ad77e9f810 71 Gene3D G3DSA:3.40.190.10 1 71 3.2E-22 T 15-10-2018 THII_3962 b507b022813f2e366726a5ad77e9f810 71 SUPERFAMILY SSF53850 1 69 5.89E-10 T 15-10-2018 THII_3962 b507b022813f2e366726a5ad77e9f810 71 Pfam PF13379 NMT1-like family 1 71 4.8E-14 T 15-10-2018 THII_3534 c5cbc49740f7ab6c29e731e6cf0afb2b 309 SUPERFAMILY SSF52540 8 307 1.68E-18 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3534 c5cbc49740f7ab6c29e731e6cf0afb2b 309 Gene3D G3DSA:3.40.50.300 6 303 3.2E-19 T 15-10-2018 THII_1064 de2ad66d1f3b01c61ba98e3242f5b4ca 155 Pfam PF01724 Domain of unknown function DUF29 7 152 4.0E-50 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1064 de2ad66d1f3b01c61ba98e3242f5b4ca 155 Gene3D G3DSA:1.20.1220.20 2 155 1.0E-30 T 15-10-2018 THII_2583 6370805d59079f5289f557f43c1e4c88 243 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 10 134 3.7E-10 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 THII_2583 6370805d59079f5289f557f43c1e4c88 243 SMART SM00646 15 134 0.0011 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 THII_2583 6370805d59079f5289f557f43c1e4c88 243 Gene3D G3DSA:3.40.630.40 3 141 1.7E-15 T 15-10-2018 THII_2583 6370805d59079f5289f557f43c1e4c88 243 SUPERFAMILY SSF53187 9 137 5.65E-12 T 15-10-2018 THII_3179 228f80fb92c3000fc8a907e513c2dba6 385 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 146 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 THII_3179 228f80fb92c3000fc8a907e513c2dba6 385 Pfam PF01546 Peptidase family M20/M25/M40 77 379 1.1E-31 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 THII_3179 228f80fb92c3000fc8a907e513c2dba6 385 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 12 378 2.1E-118 T 15-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 THII_3179 228f80fb92c3000fc8a907e513c2dba6 385 Pfam PF07687 Peptidase dimerisation domain 178 285 2.7E-22 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain THII_3179 228f80fb92c3000fc8a907e513c2dba6 385 SUPERFAMILY SSF55031 183 295 1.64E-19 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain THII_3179 228f80fb92c3000fc8a907e513c2dba6 385 SUPERFAMILY SSF53187 6 382 4.0E-56 T 15-10-2018 THII_3179 228f80fb92c3000fc8a907e513c2dba6 385 Gene3D G3DSA:3.40.630.10 12 370 1.2E-83 T 15-10-2018 THII_3179 228f80fb92c3000fc8a907e513c2dba6 385 Gene3D G3DSA:3.30.70.360 181 303 1.2E-83 T 15-10-2018 THII_2790 72f26e508fe65e5065a081603bd00a75 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 518 5.6E-18 T 15-10-2018 THII_2790 72f26e508fe65e5065a081603bd00a75 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 561 580 5.6E-18 T 15-10-2018 THII_2790 72f26e508fe65e5065a081603bd00a75 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 220 234 5.6E-18 T 15-10-2018 THII_2790 72f26e508fe65e5065a081603bd00a75 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 361 375 5.6E-18 T 15-10-2018 THII_2790 72f26e508fe65e5065a081603bd00a75 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 596 5.6E-18 T 15-10-2018 THII_2790 72f26e508fe65e5065a081603bd00a75 673 Gene3D G3DSA:2.70.150.20 164 273 4.1E-25 T 15-10-2018 THII_2790 72f26e508fe65e5065a081603bd00a75 673 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 121 629 1.5E-113 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 THII_2790 72f26e508fe65e5065a081603bd00a75 673 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 363 369 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 THII_2790 72f26e508fe65e5065a081603bd00a75 673 SUPERFAMILY SSF56784 357 609 1.48E-37 T 15-10-2018 IPR036412 HAD-like superfamily THII_2790 72f26e508fe65e5065a081603bd00a75 673 Gene3D G3DSA:3.40.1110.10 372 493 4.1E-77 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 THII_2790 72f26e508fe65e5065a081603bd00a75 673 Pfam PF00122 E1-E2 ATPase 173 306 2.1E-26 T 15-10-2018 THII_2790 72f26e508fe65e5065a081603bd00a75 673 Pfam PF00702 haloacid dehalogenase-like hydrolase 357 574 2.3E-37 T 15-10-2018 THII_2790 72f26e508fe65e5065a081603bd00a75 673 Gene3D G3DSA:3.40.50.1000 342 612 4.1E-77 T 15-10-2018 IPR023214 HAD superfamily THII_2790 72f26e508fe65e5065a081603bd00a75 673 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 154 623 2.9E-56 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 THII_2790 72f26e508fe65e5065a081603bd00a75 673 SUPERFAMILY SSF81653 173 268 9.81E-24 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 THII_0929 a3508521555dbd5fd5a72514d6b08150 404 SUPERFAMILY SSF52507 1 181 3.79E-62 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 THII_0929 a3508521555dbd5fd5a72514d6b08150 404 Pfam PF02441 Flavoprotein 7 179 1.2E-47 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 THII_0929 a3508521555dbd5fd5a72514d6b08150 404 Gene3D G3DSA:3.40.50.1950 1 184 3.7E-59 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 THII_0929 a3508521555dbd5fd5a72514d6b08150 404 SUPERFAMILY SSF102645 184 397 5.89E-77 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 THII_0929 a3508521555dbd5fd5a72514d6b08150 404 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 392 8.5E-139 T 15-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 THII_0929 a3508521555dbd5fd5a72514d6b08150 404 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 367 7.4E-70 T 15-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 THII_0929 a3508521555dbd5fd5a72514d6b08150 404 Gene3D G3DSA:3.40.50.10300 185 402 1.2E-76 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 THII_2012 c49096a1f5a6a837098d0359f64483db 638 TIGRFAM TIGR02243 TIGR02243: putative baseplate assembly protein 175 473 1.6E-46 T 15-10-2018 IPR011749 Conserved hypothetical protein CHP02243 THII_2012 c49096a1f5a6a837098d0359f64483db 638 Pfam PF04865 Baseplate J-like protein 283 459 1.8E-13 T 15-10-2018 IPR006949 Baseplate protein J-like THII_0375 931a105ccffc84b192d11bec7c160a38 274 SUPERFAMILY SSF52540 78 268 1.06E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0375 931a105ccffc84b192d11bec7c160a38 274 Pfam PF13469 Sulfotransferase family 59 224 5.6E-13 T 15-10-2018 THII_0375 931a105ccffc84b192d11bec7c160a38 274 Gene3D G3DSA:3.40.50.300 19 255 1.1E-27 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 Gene3D G3DSA:2.60.40.10 713 825 7.0E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 Gene3D G3DSA:3.80.10.10 400 469 4.8E-15 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SUPERFAMILY SSF52058 254 539 1.47E-46 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00365 286 307 160.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00365 402 430 140.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00365 147 168 46.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00365 448 470 91.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00365 170 199 610.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00365 309 334 270.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00365 511 540 650.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SUPERFAMILY SSF52047 101 344 1.61E-30 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 Gene3D G3DSA:3.80.10.10 308 399 7.0E-12 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00364 425 445 71.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00364 170 190 57.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00364 402 422 44.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00364 448 468 340.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00364 309 329 280.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00364 490 510 180.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 SMART SM00364 469 489 220.0 T 15-10-2018 THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 Gene3D G3DSA:3.80.10.10 470 577 7.8E-11 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3494 9e47d7b9501eeed3abae8fa00ca49feb 1700 Gene3D G3DSA:3.80.10.10 47 307 1.2E-47 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 Gene3D G3DSA:3.40.120.10 176 363 5.1E-63 T 15-10-2018 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 444 5.1E-192 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 SUPERFAMILY SSF53738 4 183 1.29E-50 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 SUPERFAMILY SSF53738 260 365 8.24E-30 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 375 442 3.3E-13 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 371 4.3E-31 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 Gene3D G3DSA:3.40.120.10 259 341 5.1E-63 T 15-10-2018 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 446 47.335 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 139 2.2E-45 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 Gene3D G3DSA:3.40.120.10 4 156 2.0E-49 T 15-10-2018 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 SUPERFAMILY SSF55957 360 446 1.19E-20 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 Gene3D G3DSA:3.30.310.50 372 446 1.3E-23 T 15-10-2018 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 9.9E-14 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 9.9E-14 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 9.9E-14 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 SUPERFAMILY SSF53738 158 259 1.06E-28 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2844 c1c5af1db9876a0547c47cb5987702d7 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 3.7E-17 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1809 811c6c4b717181d391fa909d09bbea7e 70 Gene3D G3DSA:2.40.50.240 2 70 5.6E-24 T 15-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily THII_1809 811c6c4b717181d391fa909d09bbea7e 70 TIGRFAM TIGR02934 nifT_nitrog: probable nitrogen fixation protein FixT 3 70 1.5E-20 T 15-10-2018 IPR009727 NifT/FixU GO:0009399 THII_1809 811c6c4b717181d391fa909d09bbea7e 70 Pfam PF06988 NifT/FixU protein 1 67 4.4E-25 T 15-10-2018 IPR009727 NifT/FixU GO:0009399 THII_1809 811c6c4b717181d391fa909d09bbea7e 70 SUPERFAMILY SSF159203 3 70 2.75E-20 T 15-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily THII_1372 5bb86861f4b1607d10500b51a7790008 269 SUPERFAMILY SSF52540 34 262 3.19E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1372 5bb86861f4b1607d10500b51a7790008 269 Gene3D G3DSA:3.40.50.300 38 254 1.1E-27 T 15-10-2018 THII_2359 67c0a59d683ed5c4522a54d41ee82b54 205 Gene3D G3DSA:3.40.50.300 5 204 4.8E-53 T 15-10-2018 THII_2359 67c0a59d683ed5c4522a54d41ee82b54 205 Pfam PF01926 50S ribosome-binding GTPase 30 148 7.0E-19 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2359 67c0a59d683ed5c4522a54d41ee82b54 205 SUPERFAMILY SSF52540 19 199 2.83E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2359 67c0a59d683ed5c4522a54d41ee82b54 205 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 195 7.9E-72 T 15-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 THII_2359 67c0a59d683ed5c4522a54d41ee82b54 205 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 26.248 T 15-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 THII_0037 30c13fa2837ab9e046a04a2ca83bd6f3 395 SUPERFAMILY SSF81901 39 248 2.01E-18 T 15-10-2018 THII_0037 30c13fa2837ab9e046a04a2ca83bd6f3 395 Pfam PF13432 Tetratricopeptide repeat 186 247 2.6E-4 T 15-10-2018 THII_0037 30c13fa2837ab9e046a04a2ca83bd6f3 395 SMART SM00028 35 68 300.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0037 30c13fa2837ab9e046a04a2ca83bd6f3 395 SMART SM00028 69 102 240.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0037 30c13fa2837ab9e046a04a2ca83bd6f3 395 SMART SM00028 215 248 11.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0037 30c13fa2837ab9e046a04a2ca83bd6f3 395 SMART SM00028 181 214 0.0051 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0037 30c13fa2837ab9e046a04a2ca83bd6f3 395 SMART SM00028 107 140 180.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0037 30c13fa2837ab9e046a04a2ca83bd6f3 395 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 388 36.488 T 15-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 THII_0037 30c13fa2837ab9e046a04a2ca83bd6f3 395 Gene3D G3DSA:1.25.40.10 33 177 5.4E-17 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0037 30c13fa2837ab9e046a04a2ca83bd6f3 395 Gene3D G3DSA:1.25.40.10 178 357 3.1E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Pfam PF13426 PAS domain 443 545 1.5E-10 T 15-10-2018 IPR000014 PAS domain THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SMART SM00388 567 632 5.0E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 PRINTS PR00344 Bacterial sensor protein C-terminal signature 738 748 6.8E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 PRINTS PR00344 Bacterial sensor protein C-terminal signature 779 792 6.8E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 PRINTS PR00344 Bacterial sensor protein C-terminal signature 720 734 6.8E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 PRINTS PR00344 Bacterial sensor protein C-terminal signature 755 773 6.8E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SUPERFAMILY SSF47226 1053 1193 1.26E-20 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SMART SM00448 953 1070 2.9E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SUPERFAMILY SSF55785 298 418 1.74E-15 T 15-10-2018 IPR035965 PAS domain superfamily THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SUPERFAMILY SSF52172 809 930 2.13E-10 T 15-10-2018 IPR011006 CheY-like superfamily THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SMART SM00387 679 795 1.8E-38 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Pfam PF00512 His Kinase A (phospho-acceptor) domain 567 631 3.4E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Pfam PF00072 Response regulator receiver domain 955 1070 2.6E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Pfam PF01627 Hpt domain 1125 1210 4.4E-11 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SUPERFAMILY SSF55785 417 545 2.09E-23 T 15-10-2018 IPR035965 PAS domain superfamily THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SMART SM00073 1114 1209 0.0047 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Gene3D G3DSA:1.20.120.160 1097 1212 1.7E-23 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Pfam PF00989 PAS fold 312 417 2.2E-6 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Gene3D G3DSA:1.10.287.130 543 630 7.7E-30 T 15-10-2018 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Gene3D G3DSA:3.30.565.10 633 797 5.8E-50 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SMART SM00091 432 498 2.3E-12 T 15-10-2018 IPR000014 PAS domain THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SMART SM00091 311 375 0.0039 T 15-10-2018 IPR000014 PAS domain THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 307 427 1.2E-8 T 15-10-2018 IPR000014 PAS domain THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 436 553 3.6E-20 T 15-10-2018 IPR000014 PAS domain THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Gene3D G3DSA:3.30.450.20 299 424 1.2E-15 T 15-10-2018 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SUPERFAMILY SSF55874 621 793 9.04E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SUPERFAMILY SSF52172 951 1082 6.69E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 SUPERFAMILY SSF47384 552 633 1.06E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Gene3D G3DSA:3.40.50.2300 812 936 8.9E-8 T 15-10-2018 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Gene3D G3DSA:3.30.450.20 425 542 5.4E-25 T 15-10-2018 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Gene3D G3DSA:3.40.50.2300 948 1074 7.8E-44 T 15-10-2018 THII_2440 b7efb1da67c7f4da4788e06a6d55dcef 1218 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 679 794 4.3E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0147 3571b5b9f594965440df1fd1446e08c4 212 Gene3D G3DSA:3.90.226.10 4 210 2.5E-83 T 15-10-2018 THII_0147 3571b5b9f594965440df1fd1446e08c4 212 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 13 202 6.0E-103 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 THII_0147 3571b5b9f594965440df1fd1446e08c4 212 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 101 112 - T 15-10-2018 IPR018215 ClpP, Ser active site THII_0147 3571b5b9f594965440df1fd1446e08c4 212 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 123 136 - T 15-10-2018 IPR033135 ClpP, histidine active site THII_0147 3571b5b9f594965440df1fd1446e08c4 212 PRINTS PR00127 Clp protease catalytic subunit P signature 101 118 4.1E-53 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 THII_0147 3571b5b9f594965440df1fd1446e08c4 212 PRINTS PR00127 Clp protease catalytic subunit P signature 30 45 4.1E-53 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 THII_0147 3571b5b9f594965440df1fd1446e08c4 212 PRINTS PR00127 Clp protease catalytic subunit P signature 179 198 4.1E-53 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 THII_0147 3571b5b9f594965440df1fd1446e08c4 212 PRINTS PR00127 Clp protease catalytic subunit P signature 122 141 4.1E-53 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 THII_0147 3571b5b9f594965440df1fd1446e08c4 212 PRINTS PR00127 Clp protease catalytic subunit P signature 70 90 4.1E-53 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 THII_0147 3571b5b9f594965440df1fd1446e08c4 212 Pfam PF00574 Clp protease 24 203 4.6E-88 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA THII_0147 3571b5b9f594965440df1fd1446e08c4 212 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 14 204 43.832 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 THII_0147 3571b5b9f594965440df1fd1446e08c4 212 SUPERFAMILY SSF52096 22 206 1.05E-72 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 Gene3D G3DSA:2.40.50.180 673 736 3.9E-27 T 15-10-2018 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 356 408 6.6E-5 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 SUPERFAMILY SSF50341 649 781 6.15E-20 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 SMART SM00260 642 781 3.4E-8 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 509 648 3.5E-13 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 Pfam PF01584 CheW-like domain 656 783 4.8E-15 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 SUPERFAMILY SSF55874 466 647 1.7E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 Gene3D G3DSA:3.30.565.10 461 649 2.9E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 Gene3D G3DSA:1.20.120.160 8 109 3.4E-10 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 SUPERFAMILY SSF52172 807 926 8.11E-32 T 15-10-2018 IPR011006 CheY-like superfamily THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 Pfam PF01627 Hpt domain 170 260 1.8E-11 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 Gene3D G3DSA:2.30.30.40 650 777 3.9E-27 T 15-10-2018 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 SMART SM00448 808 922 2.7E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 SMART SM00073 8 108 0.025 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 SMART SM00073 167 264 2.3E-19 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 SMART SM00387 507 650 6.4E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 Gene3D G3DSA:1.20.120.160 160 294 5.0E-26 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 Gene3D G3DSA:3.40.50.12740 807 928 5.5E-34 T 15-10-2018 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 647 1.7E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 628 1.7E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 566 1.7E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 SUPERFAMILY SSF47226 167 279 6.54E-24 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 Pfam PF00072 Response regulator receiver domain 810 915 1.4E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1928 127d5e4a8458e75e5aac112d0f67c521 929 SUPERFAMILY SSF47226 11 107 1.15E-10 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_1043 746c69eb5fc31363277f8128c61b04a4 389 Gene3D G3DSA:1.10.40.60 169 260 2.5E-6 T 15-10-2018 IPR038072 GspK, central domain superfamily THII_1043 746c69eb5fc31363277f8128c61b04a4 389 SUPERFAMILY SSF158544 165 241 2.28E-7 T 15-10-2018 IPR038072 GspK, central domain superfamily THII_1043 746c69eb5fc31363277f8128c61b04a4 389 Pfam PF03934 Type II secretion system (T2SS), protein K 150 304 3.7E-10 T 15-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 THII_1043 746c69eb5fc31363277f8128c61b04a4 389 Gene3D G3DSA:1.10.40.60 261 300 2.5E-6 T 15-10-2018 IPR038072 GspK, central domain superfamily THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 Pfam PF13855 Leucine rich repeat 245 300 9.8E-7 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 PRINTS PR00019 Leucine-rich repeat signature 269 282 8.3E-5 T 15-10-2018 THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 PRINTS PR00019 Leucine-rich repeat signature 450 463 8.3E-5 T 15-10-2018 THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 SMART SM00369 243 266 59.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 SMART SM00369 335 358 370.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 SMART SM00369 427 449 350.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 SMART SM00369 186 209 110.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 SMART SM00369 289 312 67.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 SMART SM00369 450 473 17.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 Gene3D G3DSA:3.80.10.10 88 225 2.8E-22 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 SUPERFAMILY SSF52058 230 534 2.28E-57 T 15-10-2018 THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 Gene3D G3DSA:3.80.10.10 227 307 2.9E-22 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 Gene3D G3DSA:3.80.10.10 308 400 1.5E-21 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 Gene3D G3DSA:3.80.10.10 401 516 1.7E-23 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1486 44e6db0770395ba8d6511c47cfe722af 1457 SUPERFAMILY SSF52058 116 224 1.28E-11 T 15-10-2018 THII_3364 63b5cacd8060de6c116f367e7dfa8830 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 32.805 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 THII_3364 63b5cacd8060de6c116f367e7dfa8830 422 SUPERFAMILY SSF52954 327 420 2.29E-21 T 15-10-2018 THII_3364 63b5cacd8060de6c116f367e7dfa8830 422 PIRSF PIRSF001549 2 421 6.2E-120 T 15-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 THII_3364 63b5cacd8060de6c116f367e7dfa8830 422 Pfam PF03129 Anticodon binding domain 329 419 3.6E-9 T 15-10-2018 IPR004154 Anticodon-binding THII_3364 63b5cacd8060de6c116f367e7dfa8830 422 Gene3D G3DSA:3.30.930.10 2 322 1.2E-118 T 15-10-2018 THII_3364 63b5cacd8060de6c116f367e7dfa8830 422 Pfam PF13393 Histidyl-tRNA synthetase 10 311 7.2E-51 T 15-10-2018 THII_3364 63b5cacd8060de6c116f367e7dfa8830 422 SUPERFAMILY SSF55681 4 318 4.58E-103 T 15-10-2018 THII_3364 63b5cacd8060de6c116f367e7dfa8830 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 404 1.6E-155 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 THII_3364 63b5cacd8060de6c116f367e7dfa8830 422 Gene3D G3DSA:3.40.50.800 324 421 1.1E-22 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily THII_3075 c6918d5ef6acb78c832411adbdbfd81c 625 SUPERFAMILY SSF52540 2 253 7.56E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3075 c6918d5ef6acb78c832411adbdbfd81c 625 Gene3D G3DSA:3.40.50.300 276 543 1.0E-56 T 15-10-2018 THII_3075 c6918d5ef6acb78c832411adbdbfd81c 625 Gene3D G3DSA:3.40.50.300 1 259 1.2E-61 T 15-10-2018 THII_3075 c6918d5ef6acb78c832411adbdbfd81c 625 Pfam PF00005 ABC transporter 18 178 2.6E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_3075 c6918d5ef6acb78c832411adbdbfd81c 625 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_3075 c6918d5ef6acb78c832411adbdbfd81c 625 SMART SM00382 26 223 2.6E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3075 c6918d5ef6acb78c832411adbdbfd81c 625 SMART SM00382 337 503 1.8E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3075 c6918d5ef6acb78c832411adbdbfd81c 625 SUPERFAMILY SSF52540 293 510 5.16E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3075 c6918d5ef6acb78c832411adbdbfd81c 625 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_3075 c6918d5ef6acb78c832411adbdbfd81c 625 Pfam PF12848 ABC transporter 217 298 4.7E-26 T 15-10-2018 IPR032781 ABC-transporter extension domain THII_3075 c6918d5ef6acb78c832411adbdbfd81c 625 Pfam PF00005 ABC transporter 328 459 9.8E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2714 dbcca1f2e3dabca84284ca00383561ca 208 SUPERFAMILY SSF101322 4 202 3.92E-63 T 15-10-2018 IPR035932 HflD-like superfamily THII_2714 dbcca1f2e3dabca84284ca00383561ca 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 202 31.528 T 15-10-2018 IPR007451 High frequency lysogenization protein HflD THII_2714 dbcca1f2e3dabca84284ca00383561ca 208 Gene3D G3DSA:1.10.3890.10 1 207 1.9E-71 T 15-10-2018 IPR035932 HflD-like superfamily THII_2714 dbcca1f2e3dabca84284ca00383561ca 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 7 200 4.0E-39 T 15-10-2018 THII_2714 dbcca1f2e3dabca84284ca00383561ca 208 Pfam PF04356 Protein of unknown function (DUF489) 5 194 1.3E-67 T 15-10-2018 IPR007451 High frequency lysogenization protein HflD THII_3821 0df2bbb4038573d073bf7063d312ae93 101 Gene3D G3DSA:2.10.109.10 2 93 1.3E-22 T 15-10-2018 THII_3821 0df2bbb4038573d073bf7063d312ae93 101 SUPERFAMILY SSF51306 6 88 6.54E-21 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily THII_3821 0df2bbb4038573d073bf7063d312ae93 101 Pfam PF00717 Peptidase S24-like 12 76 7.8E-13 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C THII_0505 3735903ef3651887328622eabe972a4d 2417 Gene3D G3DSA:2.60.40.2030 1658 1771 1.3E-26 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 Gene3D G3DSA:2.60.40.2030 1543 1655 2.5E-27 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 SUPERFAMILY SSF141072 1543 1655 2.75E-28 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 Pfam PF03160 Calx-beta domain 1647 1748 2.9E-15 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0505 3735903ef3651887328622eabe972a4d 2417 Pfam PF03160 Calx-beta domain 1535 1632 1.3E-16 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0505 3735903ef3651887328622eabe972a4d 2417 Pfam PF03160 Calx-beta domain 1783 1878 4.9E-11 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0505 3735903ef3651887328622eabe972a4d 2417 Pfam PF03160 Calx-beta domain 1891 1991 5.7E-19 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0505 3735903ef3651887328622eabe972a4d 2417 Pfam PF03160 Calx-beta domain 1434 1517 4.8E-10 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0505 3735903ef3651887328622eabe972a4d 2417 Gene3D G3DSA:2.60.40.2030 1899 2014 1.1E-26 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 Gene3D G3DSA:2.60.40.2030 1784 1898 1.5E-23 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 SUPERFAMILY SSF141072 1433 1538 2.09E-22 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 Gene3D G3DSA:2.60.40.2030 1431 1539 3.1E-20 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 SUPERFAMILY SSF51126 29 407 4.24E-21 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0505 3735903ef3651887328622eabe972a4d 2417 SUPERFAMILY SSF141072 1657 1768 9.81E-26 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 SUPERFAMILY SSF141072 1783 1901 1.31E-22 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 SUPERFAMILY SSF141072 417 559 2.62E-6 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 Gene3D G3DSA:2.160.20.20 41 400 2.4E-5 T 15-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 SUPERFAMILY SSF141072 1901 2014 5.1E-27 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0505 3735903ef3651887328622eabe972a4d 2417 SMART SM00237 1647 1748 1.1E-22 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0505 3735903ef3651887328622eabe972a4d 2417 SMART SM00237 1408 1518 2.1E-4 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0505 3735903ef3651887328622eabe972a4d 2417 SMART SM00237 1764 1878 1.1E-11 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0505 3735903ef3651887328622eabe972a4d 2417 SMART SM00237 1891 1991 1.8E-23 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0505 3735903ef3651887328622eabe972a4d 2417 SMART SM00237 1532 1633 9.6E-22 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_2077 ef3ed61864f5b3ee1ec36cba1dacfd3b 395 Pfam PF13579 Glycosyl transferase 4-like domain 16 168 2.4E-14 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 THII_2077 ef3ed61864f5b3ee1ec36cba1dacfd3b 395 Pfam PF00534 Glycosyl transferases group 1 205 366 3.0E-36 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_2077 ef3ed61864f5b3ee1ec36cba1dacfd3b 395 Gene3D G3DSA:3.40.50.2000 187 371 4.7E-71 T 15-10-2018 THII_2077 ef3ed61864f5b3ee1ec36cba1dacfd3b 395 SUPERFAMILY SSF53756 9 387 3.14E-78 T 15-10-2018 THII_2077 ef3ed61864f5b3ee1ec36cba1dacfd3b 395 Gene3D G3DSA:3.40.50.2000 13 384 4.7E-71 T 15-10-2018 THII_1630 67738720c6b33a824eb42af9bc070356 161 Gene3D G3DSA:3.40.50.300 1 161 3.3E-41 T 15-10-2018 THII_1630 67738720c6b33a824eb42af9bc070356 161 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 149 5.1E-19 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_1630 67738720c6b33a824eb42af9bc070356 161 SMART SM00173 1 158 3.5E-7 T 15-10-2018 THII_1630 67738720c6b33a824eb42af9bc070356 161 SUPERFAMILY SSF52540 1 159 2.02E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1630 67738720c6b33a824eb42af9bc070356 161 PRINTS PR00449 Transforming protein P21 ras signature 38 60 1.2E-16 T 15-10-2018 THII_1630 67738720c6b33a824eb42af9bc070356 161 PRINTS PR00449 Transforming protein P21 ras signature 133 155 1.2E-16 T 15-10-2018 THII_1630 67738720c6b33a824eb42af9bc070356 161 PRINTS PR00449 Transforming protein P21 ras signature 20 36 1.2E-16 T 15-10-2018 THII_1630 67738720c6b33a824eb42af9bc070356 161 PRINTS PR00449 Transforming protein P21 ras signature 99 112 1.2E-16 T 15-10-2018 THII_1630 67738720c6b33a824eb42af9bc070356 161 SMART SM00175 1 158 3.5E-23 T 15-10-2018 THII_1630 67738720c6b33a824eb42af9bc070356 161 Pfam PF00071 Ras family 1 156 2.0E-31 T 15-10-2018 IPR001806 Small GTPase GO:0003924|GO:0005525 THII_1630 67738720c6b33a824eb42af9bc070356 161 SMART SM00174 2 159 5.1E-4 T 15-10-2018 THII_2295 286bffee32a70b86f1819a701e0c3946 203 SUPERFAMILY SSF52738 6 194 5.1E-59 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal THII_2295 286bffee32a70b86f1819a701e0c3946 203 Pfam PF01339 CheB methylesterase 11 186 1.4E-59 T 15-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 THII_2295 286bffee32a70b86f1819a701e0c3946 203 Gene3D G3DSA:3.40.50.180 2 198 3.8E-63 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal THII_0474 9abd851f59251e3c550ff3154d2e5b62 168 SUPERFAMILY SSF56420 3 164 9.03E-58 T 15-10-2018 IPR036821 Peptide deformylase superfamily THII_0474 9abd851f59251e3c550ff3154d2e5b62 168 PRINTS PR01576 Peptide deformylase signature 33 62 5.8E-36 T 15-10-2018 IPR023635 Peptide deformylase THII_0474 9abd851f59251e3c550ff3154d2e5b62 168 PRINTS PR01576 Peptide deformylase signature 120 149 5.8E-36 T 15-10-2018 IPR023635 Peptide deformylase THII_0474 9abd851f59251e3c550ff3154d2e5b62 168 PRINTS PR01576 Peptide deformylase signature 89 100 5.8E-36 T 15-10-2018 IPR023635 Peptide deformylase THII_0474 9abd851f59251e3c550ff3154d2e5b62 168 PRINTS PR01576 Peptide deformylase signature 101 119 5.8E-36 T 15-10-2018 IPR023635 Peptide deformylase THII_0474 9abd851f59251e3c550ff3154d2e5b62 168 Pfam PF01327 Polypeptide deformylase 5 151 2.5E-48 T 15-10-2018 IPR023635 Peptide deformylase THII_0474 9abd851f59251e3c550ff3154d2e5b62 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.393 T 15-10-2018 IPR023635 Peptide deformylase THII_0474 9abd851f59251e3c550ff3154d2e5b62 168 Gene3D G3DSA:3.90.45.10 1 167 2.6E-60 T 15-10-2018 IPR036821 Peptide deformylase superfamily THII_0474 9abd851f59251e3c550ff3154d2e5b62 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 1.3E-56 T 15-10-2018 IPR023635 Peptide deformylase THII_0474 9abd851f59251e3c550ff3154d2e5b62 168 PIRSF PIRSF004749 1 167 1.2E-54 T 15-10-2018 IPR023635 Peptide deformylase THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 285 4.6E-114 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 67.002 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 PIRSF PIRSF001365 1 291 6.8E-94 T 15-10-2018 IPR002220 DapA-like GO:0016829 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 SUPERFAMILY SSF51569 2 285 1.78E-103 T 15-10-2018 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 Gene3D G3DSA:3.20.20.70 2 292 5.0E-111 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.1E-107 T 15-10-2018 IPR002220 DapA-like GO:0016829 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 15-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 15-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 4.0E-33 T 15-10-2018 IPR002220 DapA-like GO:0016829 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 4.0E-33 T 15-10-2018 IPR002220 DapA-like GO:0016829 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 4.0E-33 T 15-10-2018 IPR002220 DapA-like GO:0016829 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 4.0E-33 T 15-10-2018 IPR002220 DapA-like GO:0016829 THII_0095 45c861e10a3b10fdfc0881b5e5a52f01 292 SMART SM01130 1 289 3.3E-143 T 15-10-2018 IPR002220 DapA-like GO:0016829 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 SUPERFAMILY SSF56112 12 263 3.83E-51 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 Gene3D G3DSA:3.30.565.10 1586 1758 1.1E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 SUPERFAMILY SSF52172 1779 1907 1.42E-35 T 15-10-2018 IPR011006 CheY-like superfamily THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 SUPERFAMILY SSF55781 1319 1494 2.84E-20 T 15-10-2018 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 Pfam PF01590 GAF domain 1333 1479 1.9E-9 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 Gene3D G3DSA:1.10.287.130 1506 1585 2.5E-24 T 15-10-2018 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 SUPERFAMILY SSF47384 1507 1586 3.73E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 Pfam PF13191 AAA ATPase domain 299 487 2.3E-43 T 15-10-2018 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 Gene3D G3DSA:3.30.450.40 1307 1505 2.6E-30 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 SMART SM00065 1333 1489 1.2E-11 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 SUPERFAMILY SSF52540 296 581 6.59E-20 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 SUPERFAMILY SSF55874 1574 1752 1.83E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 SMART SM00448 1780 1893 2.0E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 Pfam PF00072 Response regulator receiver domain 1782 1892 8.1E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 Gene3D G3DSA:1.10.510.10 14 283 5.8E-40 T 15-10-2018 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1520 1585 2.4E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 Gene3D G3DSA:3.40.50.12740 1779 1985 1.3E-40 T 15-10-2018 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 Pfam PF00069 Protein kinase domain 19 257 4.3E-34 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1632 1751 2.3E-24 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 SMART SM00387 1632 1755 2.8E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 SMART SM00388 1519 1585 4.2E-22 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1681 1695 4.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1715 1733 4.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1699 1709 4.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0500 91e6f2d8bc7d6fda6173ead635ca0cc1 1989 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1739 1752 4.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 405 521 6.1E-20 T 15-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.7E-5 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.7E-5 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 SMART SM00382 37 179 5.4E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 SUPERFAMILY SSF48019 243 362 9.52E-28 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 359 5.6E-27 T 15-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 SUPERFAMILY SSF52540 29 224 1.28E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 3.4E-129 T 15-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 Gene3D G3DSA:3.30.300.150 396 510 2.5E-16 T 15-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 Gene3D G3DSA:3.40.50.300 13 177 1.3E-102 T 15-10-2018 THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 Gene3D G3DSA:1.10.8.60 8 240 1.3E-102 T 15-10-2018 THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 Gene3D G3DSA:1.20.272.10 242 361 1.0E-39 T 15-10-2018 THII_2828 ad2b3e1ab62234822d279aa292c5de82 523 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.8E-44 T 15-10-2018 THII_1518 1437c592161789fa3c3e67e24e51bace 298 Pfam PF01963 TraB family 35 294 3.5E-61 T 15-10-2018 IPR002816 Pheromone shutdown, TraB THII_2140 673254f4512ef7691f60781415c25a4f 775 Gene3D G3DSA:1.25.40.10 102 246 1.1E-22 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2140 673254f4512ef7691f60781415c25a4f 775 SUPERFAMILY SSF48452 256 376 2.99E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2140 673254f4512ef7691f60781415c25a4f 775 SUPERFAMILY SSF48452 27 229 3.98E-25 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2140 673254f4512ef7691f60781415c25a4f 775 Pfam PF12770 CHAT domain 503 773 3.2E-61 T 15-10-2018 IPR024983 CHAT domain THII_2140 673254f4512ef7691f60781415c25a4f 775 SMART SM00028 183 216 0.048 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2140 673254f4512ef7691f60781415c25a4f 775 SMART SM00028 311 344 310.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2140 673254f4512ef7691f60781415c25a4f 775 SMART SM00028 143 176 0.072 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2140 673254f4512ef7691f60781415c25a4f 775 SMART SM00028 63 96 0.52 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2140 673254f4512ef7691f60781415c25a4f 775 SMART SM00028 25 58 32.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2140 673254f4512ef7691f60781415c25a4f 775 SMART SM00028 273 306 8.5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2140 673254f4512ef7691f60781415c25a4f 775 SMART SM00028 103 136 13.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2140 673254f4512ef7691f60781415c25a4f 775 Gene3D G3DSA:1.25.40.10 253 437 8.6E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2140 673254f4512ef7691f60781415c25a4f 775 Pfam PF13424 Tetratricopeptide repeat 27 94 1.0E-7 T 15-10-2018 THII_2140 673254f4512ef7691f60781415c25a4f 775 Pfam PF13424 Tetratricopeptide repeat 105 175 5.0E-8 T 15-10-2018 THII_2140 673254f4512ef7691f60781415c25a4f 775 Gene3D G3DSA:1.25.40.10 20 101 5.1E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3503 c5380557aee0e5a28f4dab6d4cc49700 200 SUPERFAMILY SSF52980 39 171 2.25E-15 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3503 c5380557aee0e5a28f4dab6d4cc49700 200 Pfam PF05685 Putative restriction endonuclease 40 189 3.6E-26 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3503 c5380557aee0e5a28f4dab6d4cc49700 200 Gene3D G3DSA:3.90.1570.10 26 197 4.1E-10 T 15-10-2018 THII_3096 4a4a6f63217e5b9a876cbdaa18f7d7ad 556 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 242 523 3.3E-82 T 15-10-2018 IPR013358 Pilus biogenesis, MshL THII_3096 4a4a6f63217e5b9a876cbdaa18f7d7ad 556 Gene3D G3DSA:3.55.50.30 65 145 4.1E-11 T 15-10-2018 THII_3096 4a4a6f63217e5b9a876cbdaa18f7d7ad 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 340 364 2.0E-18 T 15-10-2018 IPR001775 GspD/PilQ family THII_3096 4a4a6f63217e5b9a876cbdaa18f7d7ad 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 511 525 2.0E-18 T 15-10-2018 IPR001775 GspD/PilQ family THII_3096 4a4a6f63217e5b9a876cbdaa18f7d7ad 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 277 287 2.0E-18 T 15-10-2018 IPR001775 GspD/PilQ family THII_3096 4a4a6f63217e5b9a876cbdaa18f7d7ad 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 488 506 2.0E-18 T 15-10-2018 IPR001775 GspD/PilQ family THII_3096 4a4a6f63217e5b9a876cbdaa18f7d7ad 556 Pfam PF00263 Bacterial type II and III secretion system protein 345 524 2.1E-40 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 THII_3096 4a4a6f63217e5b9a876cbdaa18f7d7ad 556 Pfam PF07655 Secretin N-terminal domain 150 233 2.8E-9 T 15-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 THII_2700 2626d8759262a3ba6bfc6ef59ce3a14a 144 Pfam PF08334 Type II secretion system (T2SS), protein G 31 139 2.3E-35 T 15-10-2018 IPR013545 Type II secretion system protein G THII_2700 2626d8759262a3ba6bfc6ef59ce3a14a 144 SUPERFAMILY SSF54523 34 140 1.05E-30 T 15-10-2018 THII_2700 2626d8759262a3ba6bfc6ef59ce3a14a 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 140 4.9E-51 T 15-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 THII_2700 2626d8759262a3ba6bfc6ef59ce3a14a 144 Gene3D G3DSA:3.30.700.10 31 140 2.6E-31 T 15-10-2018 THII_2700 2626d8759262a3ba6bfc6ef59ce3a14a 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 5.1E-13 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 THII_2700 2626d8759262a3ba6bfc6ef59ce3a14a 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 5.1E-13 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 THII_2700 2626d8759262a3ba6bfc6ef59ce3a14a 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 28 7.1E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2700 2626d8759262a3ba6bfc6ef59ce3a14a 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2700 2626d8759262a3ba6bfc6ef59ce3a14a 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 9.7E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2169 3dbaae53299980fa16e025ea00700e9d 614 Pfam PF00072 Response regulator receiver domain 491 602 3.6E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2169 3dbaae53299980fa16e025ea00700e9d 614 SMART SM00448 489 603 1.9E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2169 3dbaae53299980fa16e025ea00700e9d 614 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 297 3.0E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2169 3dbaae53299980fa16e025ea00700e9d 614 Gene3D G3DSA:3.40.50.12740 488 614 2.3E-44 T 15-10-2018 THII_2169 3dbaae53299980fa16e025ea00700e9d 614 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 458 1.6E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2169 3dbaae53299980fa16e025ea00700e9d 614 SMART SM00388 232 297 4.0E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2169 3dbaae53299980fa16e025ea00700e9d 614 SMART SM00387 344 460 5.1E-32 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2169 3dbaae53299980fa16e025ea00700e9d 614 Gene3D G3DSA:3.30.565.10 296 462 6.1E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2169 3dbaae53299980fa16e025ea00700e9d 614 Gene3D G3DSA:1.10.287.130 210 295 1.0E-27 T 15-10-2018 THII_2169 3dbaae53299980fa16e025ea00700e9d 614 SUPERFAMILY SSF47384 219 298 1.0E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2169 3dbaae53299980fa16e025ea00700e9d 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 4.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2169 3dbaae53299980fa16e025ea00700e9d 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 4.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2169 3dbaae53299980fa16e025ea00700e9d 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 4.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2169 3dbaae53299980fa16e025ea00700e9d 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 4.0E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2169 3dbaae53299980fa16e025ea00700e9d 614 SUPERFAMILY SSF52172 487 607 7.83E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_2169 3dbaae53299980fa16e025ea00700e9d 614 SUPERFAMILY SSF55874 286 456 3.41E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2169 3dbaae53299980fa16e025ea00700e9d 614 Pfam PF12729 Four helix bundle sensory module for signal transduction 10 181 2.5E-10 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain THII_1472 c8fb3b1701687162e9f203adfb11f7f1 123 Pfam PF00085 Thioredoxin 4 102 5.7E-29 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 THII_1472 c8fb3b1701687162e9f203adfb11f7f1 123 PIRSF PIRSF000077 1 104 2.9E-29 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 THII_1472 c8fb3b1701687162e9f203adfb11f7f1 123 Gene3D G3DSA:3.40.30.10 2 118 2.6E-32 T 15-10-2018 THII_1472 c8fb3b1701687162e9f203adfb11f7f1 123 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 5.4E-31 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 THII_1472 c8fb3b1701687162e9f203adfb11f7f1 123 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 THII_1472 c8fb3b1701687162e9f203adfb11f7f1 123 PRINTS PR00421 Thioredoxin family signature 68 79 2.8E-9 T 15-10-2018 THII_1472 c8fb3b1701687162e9f203adfb11f7f1 123 PRINTS PR00421 Thioredoxin family signature 29 38 2.8E-9 T 15-10-2018 THII_1472 c8fb3b1701687162e9f203adfb11f7f1 123 PRINTS PR00421 Thioredoxin family signature 21 29 2.8E-9 T 15-10-2018 THII_1472 c8fb3b1701687162e9f203adfb11f7f1 123 SUPERFAMILY SSF52833 4 105 3.28E-35 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_1502 5f8b8063a02f614c65e17fa2f781036b 798 SUPERFAMILY SSF51126 33 308 2.04E-26 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_1502 5f8b8063a02f614c65e17fa2f781036b 798 SUPERFAMILY SSF51126 316 423 2.76E-8 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_1502 5f8b8063a02f614c65e17fa2f781036b 798 SMART SM00912 23 137 1.4E-12 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_1502 5f8b8063a02f614c65e17fa2f781036b 798 Gene3D G3DSA:2.160.20.10 564 749 5.5E-9 T 15-10-2018 IPR012334 Pectin lyase fold THII_1502 5f8b8063a02f614c65e17fa2f781036b 798 Gene3D G3DSA:2.160.20.10 19 376 1.5E-46 T 15-10-2018 IPR012334 Pectin lyase fold THII_1502 5f8b8063a02f614c65e17fa2f781036b 798 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 54 130 4.0E-19 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_1502 5f8b8063a02f614c65e17fa2f781036b 798 SUPERFAMILY SSF51126 521 661 5.96E-6 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_1502 5f8b8063a02f614c65e17fa2f781036b 798 Pfam PF05860 haemagglutination activity domain 39 131 3.3E-21 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR01159 DNA gyrase subunit B signature 771 787 1.6E-71 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.6E-71 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR01159 DNA gyrase subunit B signature 755 767 1.6E-71 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.6E-71 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR01159 DNA gyrase subunit B signature 6 16 1.6E-71 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.6E-71 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.6E-71 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.6E-71 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.6E-71 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.6E-71 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 Pfam PF01751 Toprim domain 419 531 6.8E-19 T 15-10-2018 IPR006171 TOPRIM domain THII_1214 630a280f09b65ec7a97415821f57cc1e 802 Gene3D G3DSA:3.10.20.690 592 676 1.2E-10 T 15-10-2018 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 SMART SM00387 32 176 1.5E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1214 630a280f09b65ec7a97415821f57cc1e 802 SUPERFAMILY SSF55874 6 216 7.73E-74 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1214 630a280f09b65ec7a97415821f57cc1e 802 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 173 2.6E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1214 630a280f09b65ec7a97415821f57cc1e 802 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 802 98.812 T 15-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 Gene3D G3DSA:3.30.230.10 221 392 2.6E-69 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_1214 630a280f09b65ec7a97415821f57cc1e 802 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 801 6.4E-299 T 15-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 SUPERFAMILY SSF54211 221 392 3.03E-57 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_1214 630a280f09b65ec7a97415821f57cc1e 802 Gene3D G3DSA:3.40.50.670 398 569 8.1E-74 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 Pfam PF00204 DNA gyrase B 221 390 4.1E-56 T 15-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 SUPERFAMILY SSF56719 394 793 1.46E-86 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 15-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 Gene3D G3DSA:3.40.50.670 677 801 2.1E-27 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 SMART SM00433 36 795 1.7E-259 T 15-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 730 791 4.4E-30 T 15-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR00418 DNA topoisomerase II family signature 114 128 7.5E-71 T 15-10-2018 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR00418 DNA topoisomerase II family signature 505 522 7.5E-71 T 15-10-2018 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR00418 DNA topoisomerase II family signature 420 434 7.5E-71 T 15-10-2018 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR00418 DNA topoisomerase II family signature 525 537 7.5E-71 T 15-10-2018 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR00418 DNA topoisomerase II family signature 36 51 7.5E-71 T 15-10-2018 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR00418 DNA topoisomerase II family signature 487 503 7.5E-71 T 15-10-2018 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR00418 DNA topoisomerase II family signature 734 750 7.5E-71 T 15-10-2018 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR00418 DNA topoisomerase II family signature 268 281 7.5E-71 T 15-10-2018 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 PRINTS PR00418 DNA topoisomerase II family signature 71 84 7.5E-71 T 15-10-2018 THII_1214 630a280f09b65ec7a97415821f57cc1e 802 Gene3D G3DSA:3.30.565.10 3 220 1.1E-91 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0723 50557ea802bb0ec4c642d31355b52f75 264 SUPERFAMILY SSF55831 1 264 1.27E-123 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0723 50557ea802bb0ec4c642d31355b52f75 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.1E-46 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0723 50557ea802bb0ec4c642d31355b52f75 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.1E-46 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0723 50557ea802bb0ec4c642d31355b52f75 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.1E-46 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0723 50557ea802bb0ec4c642d31355b52f75 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.1E-46 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0723 50557ea802bb0ec4c642d31355b52f75 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.1E-46 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0723 50557ea802bb0ec4c642d31355b52f75 264 Pfam PF00303 Thymidylate synthase 3 264 4.3E-121 T 15-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0723 50557ea802bb0ec4c642d31355b52f75 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 85 4.2E-39 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0723 50557ea802bb0ec4c642d31355b52f75 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 1.7E-88 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0723 50557ea802bb0ec4c642d31355b52f75 264 Gene3D G3DSA:3.30.572.10 1 264 4.1E-126 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0723 50557ea802bb0ec4c642d31355b52f75 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 15-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0723 50557ea802bb0ec4c642d31355b52f75 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 38.78 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 THII_0447 be88761965c5da6c797940ab0c668a97 116 Pfam PF10066 Uncharacterized conserved protein (DUF2304) 3 106 1.1E-27 T 15-10-2018 IPR019277 Protein of unknown function DUF2304 THII_0590 ac8c41a92384689b4de746bcb46b7c93 299 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 55 290 1.2E-33 T 15-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 THII_0590 ac8c41a92384689b4de746bcb46b7c93 299 SUPERFAMILY SSF50156 200 295 9.48E-13 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 THII_0590 ac8c41a92384689b4de746bcb46b7c93 299 Gene3D G3DSA:2.30.30.830 97 166 3.2E-11 T 15-10-2018 THII_0590 ac8c41a92384689b4de746bcb46b7c93 299 Gene3D G3DSA:2.30.42.10 197 295 3.2E-19 T 15-10-2018 THII_0590 ac8c41a92384689b4de746bcb46b7c93 299 Pfam PF11356 Type II secretion system protein C 50 165 1.7E-20 T 15-10-2018 IPR024961 Type II secretion system protein C, N-terminal THII_1476 00608d6312b531ec233ba1c43068b5ba 378 SUPERFAMILY SSF102114 50 345 2.09E-24 T 15-10-2018 THII_1476 00608d6312b531ec233ba1c43068b5ba 378 Pfam PF04055 Radical SAM superfamily 55 192 2.5E-7 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_1476 00608d6312b531ec233ba1c43068b5ba 378 Pfam PF13186 Iron-sulfur cluster-binding domain 275 343 1.4E-5 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain THII_0377 2d5a63fe97588f408cbfbd488af8ef6e 111 Gene3D G3DSA:3.30.160.250 6 97 1.6E-15 T 15-10-2018 THII_0377 2d5a63fe97588f408cbfbd488af8ef6e 111 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 17 77 3.8E-8 T 15-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system THII_0377 2d5a63fe97588f408cbfbd488af8ef6e 111 SUPERFAMILY SSF143100 9 70 1.05E-16 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like THII_1745 606d98a17cde67bb9ef52ffbe475b39c 242 SUPERFAMILY SSF53633 6 238 7.72E-68 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily THII_1745 606d98a17cde67bb9ef52ffbe475b39c 242 Gene3D G3DSA:3.40.1160.10 2 242 1.6E-72 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily THII_1745 606d98a17cde67bb9ef52ffbe475b39c 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 6 239 42.99 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 THII_1745 606d98a17cde67bb9ef52ffbe475b39c 242 Pfam PF00696 Amino acid kinase family 10 217 1.4E-27 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 THII_1745 606d98a17cde67bb9ef52ffbe475b39c 242 PIRSF PIRSF005650 4 242 1.7E-87 T 15-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 THII_1745 606d98a17cde67bb9ef52ffbe475b39c 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 8 239 1.3E-96 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 THII_0400 5ffa974df2ed094e6c5e57cd30d867bb 88 SUPERFAMILY SSF143120 18 70 2.62E-6 T 15-10-2018 IPR036165 YefM-like superfamily THII_0448 4260da6de7276c5b635fabcea81cb769 588 Pfam PF01740 STAS domain 458 557 6.3E-10 T 15-10-2018 IPR002645 STAS domain THII_0448 4260da6de7276c5b635fabcea81cb769 588 SUPERFAMILY SSF52091 456 559 1.82E-13 T 15-10-2018 IPR036513 STAS domain superfamily THII_0448 4260da6de7276c5b635fabcea81cb769 588 TIGRFAM TIGR00815 sulP: sulfate permease 20 557 3.2E-117 T 15-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 THII_0448 4260da6de7276c5b635fabcea81cb769 588 Pfam PF00916 Sulfate permease family 34 401 7.9E-97 T 15-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 THII_0448 4260da6de7276c5b635fabcea81cb769 588 Gene3D G3DSA:3.30.750.24 448 567 9.2E-18 T 15-10-2018 IPR036513 STAS domain superfamily THII_3174 efa68927f1f94c140206f50ed4a13d55 423 SUPERFAMILY SSF48695 51 225 1.68E-20 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily THII_3174 efa68927f1f94c140206f50ed4a13d55 423 Pfam PF13435 Cytochrome c554 and c-prime 55 141 3.6E-18 T 15-10-2018 IPR023155 Cytochrome c-552/4 THII_3174 efa68927f1f94c140206f50ed4a13d55 423 Gene3D G3DSA:1.10.1130.10 49 159 7.2E-11 T 15-10-2018 THII_3174 efa68927f1f94c140206f50ed4a13d55 423 SUPERFAMILY SSF48695 51 312 3.81E-7 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 Gene3D G3DSA:3.30.420.40 3 316 2.5E-128 T 15-10-2018 THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 SUPERFAMILY SSF53067 101 310 3.74E-44 T 15-10-2018 THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 15-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 SUPERFAMILY SSF53067 3 122 1.88E-29 T 15-10-2018 THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 Pfam PF00814 Glycoprotease family 24 308 4.8E-101 T 15-10-2018 IPR000905 Gcp-like domain THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.7E-51 T 15-10-2018 IPR017861 Kae1/TsaD family THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.7E-51 T 15-10-2018 IPR017861 Kae1/TsaD family THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.7E-51 T 15-10-2018 IPR017861 Kae1/TsaD family THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.7E-51 T 15-10-2018 IPR017861 Kae1/TsaD family THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 264 273 1.7E-51 T 15-10-2018 IPR017861 Kae1/TsaD family THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.7E-51 T 15-10-2018 IPR017861 Kae1/TsaD family THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 332 64.959 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 307 5.8E-120 T 15-10-2018 IPR017861 Kae1/TsaD family THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 Gene3D G3DSA:3.30.420.40 129 294 2.5E-128 T 15-10-2018 THII_0667 ec97f83e164493f23cb81c416dbc5ca3 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 314 2.7E-135 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 THII_2966 0d2b73b6307476fbdb23270b7eea0d92 257 SUPERFAMILY SSF56219 1 254 9.03E-79 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_2966 0d2b73b6307476fbdb23270b7eea0d92 257 Gene3D G3DSA:3.60.10.10 1 255 8.6E-86 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_2966 0d2b73b6307476fbdb23270b7eea0d92 257 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 15-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 THII_2966 0d2b73b6307476fbdb23270b7eea0d92 257 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 251 9.6E-75 T 15-10-2018 THII_2966 0d2b73b6307476fbdb23270b7eea0d92 257 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 246 6.1E-20 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase THII_2966 0d2b73b6307476fbdb23270b7eea0d92 257 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 1.0E-80 T 15-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 THII_3865 27ddbf45c742b97a02ff1edd99ae5cc5 179 Gene3D G3DSA:2.30.110.10 2 127 3.8E-20 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 THII_3865 27ddbf45c742b97a02ff1edd99ae5cc5 179 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 98 3.8E-11 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 THII_3865 27ddbf45c742b97a02ff1edd99ae5cc5 179 SUPERFAMILY SSF50475 7 106 3.73E-13 T 15-10-2018 THII_3459 8736f5a69c45679192e3ba87efb3817b 139 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 15-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 THII_3459 8736f5a69c45679192e3ba87efb3817b 139 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.2E-33 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3459 8736f5a69c45679192e3ba87efb3817b 139 Pfam PF01250 Ribosomal protein S6 3 90 9.7E-26 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3459 8736f5a69c45679192e3ba87efb3817b 139 SUPERFAMILY SSF54995 1 103 6.41E-35 T 15-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3459 8736f5a69c45679192e3ba87efb3817b 139 Gene3D G3DSA:3.30.70.60 1 91 6.8E-30 T 15-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 THII_3459 8736f5a69c45679192e3ba87efb3817b 139 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.233 T 15-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 Gene3D G3DSA:1.10.287.380 554 634 3.0E-23 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 Gene3D G3DSA:3.40.50.300 5 283 2.7E-67 T 15-10-2018 THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 Pfam PF00005 ABC transporter 23 189 4.1E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 Pfam PF00005 ABC transporter 341 473 2.0E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 Pfam PF16326 ABC transporter C-terminal domain 563 631 5.9E-18 T 15-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 Pfam PF12848 ABC transporter 228 307 7.7E-11 T 15-10-2018 IPR032781 ABC-transporter extension domain THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 Gene3D G3DSA:3.40.50.300 285 546 3.9E-67 T 15-10-2018 THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 SUPERFAMILY SSF52540 315 532 7.83E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 SUPERFAMILY SSF52540 8 237 2.76E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 SMART SM00382 348 518 7.2E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2697 8d57659ad6e7e77e9eb16fd9fb827d45 634 SMART SM00382 32 234 1.6E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2974 1c29e2950ef866e5581766801087a934 186 SUPERFAMILY SSF52980 25 185 6.43E-17 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2974 1c29e2950ef866e5581766801087a934 186 Gene3D G3DSA:3.90.1570.10 13 186 1.6E-13 T 15-10-2018 THII_2974 1c29e2950ef866e5581766801087a934 186 Pfam PF05685 Putative restriction endonuclease 24 175 1.5E-28 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0292 00035f5d442491066fb6a3c71203bacf 444 ProSitePatterns PS00755 Protein secY signature 1. 77 96 - T 15-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 THII_0292 00035f5d442491066fb6a3c71203bacf 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 117 140 2.3E-93 T 15-10-2018 THII_0292 00035f5d442491066fb6a3c71203bacf 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 2.3E-93 T 15-10-2018 THII_0292 00035f5d442491066fb6a3c71203bacf 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 24 42 2.3E-93 T 15-10-2018 THII_0292 00035f5d442491066fb6a3c71203bacf 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 76 96 2.3E-93 T 15-10-2018 THII_0292 00035f5d442491066fb6a3c71203bacf 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 368 386 2.3E-93 T 15-10-2018 THII_0292 00035f5d442491066fb6a3c71203bacf 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 2.3E-93 T 15-10-2018 THII_0292 00035f5d442491066fb6a3c71203bacf 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 400 418 2.3E-93 T 15-10-2018 THII_0292 00035f5d442491066fb6a3c71203bacf 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 313 335 2.3E-93 T 15-10-2018 THII_0292 00035f5d442491066fb6a3c71203bacf 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 2.3E-93 T 15-10-2018 THII_0292 00035f5d442491066fb6a3c71203bacf 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 11 431 29.601 T 15-10-2018 IPR026593 Protein translocase subunit SecY THII_0292 00035f5d442491066fb6a3c71203bacf 444 Pfam PF00344 SecY translocase 77 415 1.4E-117 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 THII_0292 00035f5d442491066fb6a3c71203bacf 444 Gene3D G3DSA:1.10.3370.10 8 427 1.2E-162 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 THII_0292 00035f5d442491066fb6a3c71203bacf 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 427 2.2E-131 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 THII_0292 00035f5d442491066fb6a3c71203bacf 444 PIRSF PIRSF004557 4 439 2.2E-122 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 THII_0292 00035f5d442491066fb6a3c71203bacf 444 SUPERFAMILY SSF103491 8 422 1.44E-131 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 Gene3D G3DSA:1.10.287.130 178 239 5.3E-34 T 15-10-2018 THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 394 1.2E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 SUPERFAMILY SSF55874 241 394 1.57E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 Gene3D G3DSA:3.30.450.20 33 159 1.3E-9 T 15-10-2018 THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 SUPERFAMILY SSF55785 35 147 6.49E-5 T 15-10-2018 IPR035965 PAS domain superfamily THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 TIGRFAM TIGR02938 nifL_nitrog: nitrogen fixation negative regulator NifL 34 392 2.7E-120 T 15-10-2018 IPR014285 Nitrogen fixation negative regulator NifL GO:0007165|GO:0009399 THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 392 2.3E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 338 2.3E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 373 2.3E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 352 2.3E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 SMART SM00387 284 395 1.7E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2555 eaae8ea9f6c56e2771f2dd7a90318734 399 Gene3D G3DSA:3.30.565.10 240 392 5.3E-34 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3604 72c3b4656f9bf06be2c4feadda288141 206 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 2 204 2.0E-63 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset THII_3604 72c3b4656f9bf06be2c4feadda288141 206 Gene3D G3DSA:3.55.50.10 25 116 6.8E-75 T 15-10-2018 THII_3604 72c3b4656f9bf06be2c4feadda288141 206 Pfam PF05954 Phage late control gene D protein (GPD) 2 206 6.4E-63 T 15-10-2018 THII_3604 72c3b4656f9bf06be2c4feadda288141 206 Gene3D G3DSA:3.30.1920.30 151 205 6.8E-75 T 15-10-2018 THII_3604 72c3b4656f9bf06be2c4feadda288141 206 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 2 206 6.2E-54 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein THII_3604 72c3b4656f9bf06be2c4feadda288141 206 SUPERFAMILY SSF69279 2 112 1.06E-45 T 15-10-2018 THII_3604 72c3b4656f9bf06be2c4feadda288141 206 Gene3D G3DSA:2.30.110.50 2 150 6.8E-75 T 15-10-2018 THII_3604 72c3b4656f9bf06be2c4feadda288141 206 SUPERFAMILY SSF69279 116 206 3.06E-9 T 15-10-2018 THII_3743 a02ab40376159fcc4babf754a776909f 254 Gene3D G3DSA:3.40.50.10090 39 172 5.4E-69 T 15-10-2018 THII_3743 a02ab40376159fcc4babf754a776909f 254 Gene3D G3DSA:3.40.50.10090 10 239 5.4E-69 T 15-10-2018 THII_3743 a02ab40376159fcc4babf754a776909f 254 SUPERFAMILY SSF69618 8 246 6.15E-50 T 15-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3743 a02ab40376159fcc4babf754a776909f 254 Pfam PF02602 Uroporphyrinogen-III synthase HemD 22 242 4.3E-41 T 15-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3493 919593366f241a16a852b8334c9b142c 233 SUPERFAMILY SSF48371 11 222 6.33E-44 T 15-10-2018 IPR016024 Armadillo-type fold THII_3493 919593366f241a16a852b8334c9b142c 233 Gene3D G3DSA:1.25.10.90 3 230 4.7E-46 T 15-10-2018 THII_3493 919593366f241a16a852b8334c9b142c 233 Pfam PF08713 DNA alkylation repair enzyme 7 222 1.6E-64 T 15-10-2018 IPR014825 DNA alkylation repair enzyme THII_0948 14be98d37473c9e2365acc6228eef4aa 320 SUPERFAMILY SSF55486 103 311 6.37E-53 T 15-10-2018 THII_0948 14be98d37473c9e2365acc6228eef4aa 320 Pfam PF06167 Glucose-regulated metallo-peptidase M90 71 310 1.7E-90 T 15-10-2018 IPR010384 MtfA family THII_0948 14be98d37473c9e2365acc6228eef4aa 320 Gene3D G3DSA:3.40.390.10 209 320 5.1E-37 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 THII_0948 14be98d37473c9e2365acc6228eef4aa 320 Gene3D G3DSA:1.10.472.150 81 206 7.0E-41 T 15-10-2018 THII_2889 fd5cdb5972f3ced4bda8a1f476216e17 245 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 216 227 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2889 fd5cdb5972f3ced4bda8a1f476216e17 245 SUPERFAMILY SSF54862 56 231 4.47E-13 T 15-10-2018 THII_2889 fd5cdb5972f3ced4bda8a1f476216e17 245 Gene3D G3DSA:3.30.70.20 53 131 1.2E-13 T 15-10-2018 THII_2889 fd5cdb5972f3ced4bda8a1f476216e17 245 Gene3D G3DSA:3.30.70.20 180 242 9.3E-10 T 15-10-2018 THII_2889 fd5cdb5972f3ced4bda8a1f476216e17 245 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 59 70 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2889 fd5cdb5972f3ced4bda8a1f476216e17 245 Pfam PF12838 4Fe-4S dicluster domain 182 228 8.3E-8 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2889 fd5cdb5972f3ced4bda8a1f476216e17 245 Pfam PF12838 4Fe-4S dicluster domain 58 113 1.8E-8 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0231 73e869a3741675172aef933d3212520e 177 SMART SM00347 45 147 3.6E-21 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 THII_0231 73e869a3741675172aef933d3212520e 177 Pfam PF01047 MarR family 52 111 9.1E-13 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 THII_0231 73e869a3741675172aef933d3212520e 177 Gene3D G3DSA:1.10.10.10 9 156 5.7E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0231 73e869a3741675172aef933d3212520e 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 1.7E-6 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 THII_0231 73e869a3741675172aef933d3212520e 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 1.7E-6 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 THII_0231 73e869a3741675172aef933d3212520e 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 1.7E-6 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 THII_0231 73e869a3741675172aef933d3212520e 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 1.7E-6 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 THII_0231 73e869a3741675172aef933d3212520e 177 SUPERFAMILY SSF46785 22 163 3.56E-30 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Gene3D G3DSA:1.10.150.20 434 507 1.3E-30 T 15-10-2018 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 665 2.6E-262 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 333 348 - T 15-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site THII_3208 9e850a5f2201a88cd2363b057f043a35 671 SMART SM00292 595 671 2.5E-14 T 15-10-2018 IPR001357 BRCT domain THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 669 2.5E-17 T 15-10-2018 IPR001357 BRCT domain THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Gene3D G3DSA:2.40.50.140 320 392 6.0E-32 T 15-10-2018 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Gene3D G3DSA:2.20.70.80 393 433 6.5E-17 T 15-10-2018 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 320 1.3E-132 T 15-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 436 3.3E-9 T 15-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Pfam PF12826 Helix-hairpin-helix motif 512 575 1.1E-25 T 15-10-2018 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 SMART SM00278 448 467 28.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 SMART SM00278 546 565 1.9 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 SMART SM00278 482 501 3.3 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 SMART SM00278 514 533 1500.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 SUPERFAMILY SSF56091 6 318 2.26E-120 T 15-10-2018 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Pfam PF14520 Helix-hairpin-helix domain 451 503 1.1E-5 T 15-10-2018 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Gene3D G3DSA:3.30.470.90 72 319 9.9E-100 T 15-10-2018 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 324 400 1.6E-34 T 15-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 SUPERFAMILY SSF52113 594 670 1.25E-20 T 15-10-2018 IPR036420 BRCT domain superfamily THII_3208 9e850a5f2201a88cd2363b057f043a35 671 SMART SM00532 6 450 2.6E-268 T 15-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Gene3D G3DSA:3.40.50.10190 588 670 3.0E-27 T 15-10-2018 IPR036420 BRCT domain superfamily THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Gene3D G3DSA:1.10.150.20 508 587 7.6E-30 T 15-10-2018 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Hamap MF_01588 DNA ligase [ligA]. 5 669 52.935 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 Gene3D G3DSA:1.10.287.610 5 71 3.5E-30 T 15-10-2018 THII_3208 9e850a5f2201a88cd2363b057f043a35 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 117 146 - T 15-10-2018 IPR018239 NAD-dependent DNA ligase, active site THII_3208 9e850a5f2201a88cd2363b057f043a35 671 SUPERFAMILY SSF50249 320 403 6.17E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_3208 9e850a5f2201a88cd2363b057f043a35 671 SUPERFAMILY SSF47781 405 585 1.07E-62 T 15-10-2018 IPR010994 RuvA domain 2-like THII_3208 9e850a5f2201a88cd2363b057f043a35 671 PIRSF PIRSF001604 1 671 6.8E-255 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 THII_0765 583c0aa43a33d1da47b6c05ac1704ccd 179 Pfam PF00691 OmpA family 78 171 5.6E-19 T 15-10-2018 IPR006665 OmpA-like domain THII_0765 583c0aa43a33d1da47b6c05ac1704ccd 179 Gene3D G3DSA:3.30.1330.60 64 178 1.2E-37 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_0765 583c0aa43a33d1da47b6c05ac1704ccd 179 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 178 29.776 T 15-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 THII_0765 583c0aa43a33d1da47b6c05ac1704ccd 179 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 76 178 4.5E-40 T 15-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 THII_0765 583c0aa43a33d1da47b6c05ac1704ccd 179 PRINTS PR01021 OMPA domain signature 123 139 3.5E-16 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_0765 583c0aa43a33d1da47b6c05ac1704ccd 179 PRINTS PR01021 OMPA domain signature 108 123 3.5E-16 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_0765 583c0aa43a33d1da47b6c05ac1704ccd 179 PRINTS PR01021 OMPA domain signature 78 100 3.5E-16 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_0765 583c0aa43a33d1da47b6c05ac1704ccd 179 SUPERFAMILY SSF103088 76 178 1.29E-34 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_0765 583c0aa43a33d1da47b6c05ac1704ccd 179 ProSitePatterns PS01068 OmpA-like domain. 110 154 - T 15-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 742 32.914 T 15-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 SUPERFAMILY SSF101904 499 740 3.79E-45 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 Gene3D G3DSA:3.90.199.10 34 482 1.2E-176 T 15-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 Gene3D G3DSA:3.30.1360.40 240 333 1.2E-176 T 15-10-2018 THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 Gene3D G3DSA:1.10.268.10 371 456 1.2E-176 T 15-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 SUPERFAMILY SSF56719 33 483 4.05E-155 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 Gene3D G3DSA:2.120.10.90 502 737 1.4E-9 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 651 693 5.8E-5 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 635 0.72 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 469 2.0E-136 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 741 0.0 T 15-10-2018 THII_2589 b2c79497b7939c6cef4464f8bf22501f 748 SMART SM00434 13 463 3.8E-226 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_2411 3bdb0a578590e08e73f343239072700c 123 SUPERFAMILY SSF46785 46 103 1.09E-5 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_3360 3c1e237981a7a79e4fa3d15605122770 134 SUPERFAMILY SSF53098 18 114 3.29E-5 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_3360 3c1e237981a7a79e4fa3d15605122770 134 Pfam PF13358 DDE superfamily endonuclease 18 108 3.4E-20 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_3360 3c1e237981a7a79e4fa3d15605122770 134 Gene3D G3DSA:3.30.420.470 8 129 7.5E-9 T 15-10-2018 THII_0822 e587687d3fda51b09fd017dd0d692e4c 244 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 11 244 2.9E-92 T 15-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase THII_0822 e587687d3fda51b09fd017dd0d692e4c 244 Pfam PF02397 Bacterial sugar transferase 50 238 1.8E-69 T 15-10-2018 IPR003362 Bacterial sugar transferase THII_3629 77981e83a7e5fb683b8ccd9ec21c5da2 270 Pfam PF03703 Bacterial PH domain 182 260 7.1E-6 T 15-10-2018 IPR005182 Domain of unknown function DUF304 THII_3629 77981e83a7e5fb683b8ccd9ec21c5da2 270 PRINTS PR00625 DnaJ domain signature 41 61 5.7E-11 T 15-10-2018 IPR001623 DnaJ domain THII_3629 77981e83a7e5fb683b8ccd9ec21c5da2 270 PRINTS PR00625 DnaJ domain signature 24 39 5.7E-11 T 15-10-2018 IPR001623 DnaJ domain THII_3629 77981e83a7e5fb683b8ccd9ec21c5da2 270 PRINTS PR00625 DnaJ domain signature 61 80 5.7E-11 T 15-10-2018 IPR001623 DnaJ domain THII_3629 77981e83a7e5fb683b8ccd9ec21c5da2 270 PRINTS PR00625 DnaJ domain signature 6 24 5.7E-11 T 15-10-2018 IPR001623 DnaJ domain THII_3629 77981e83a7e5fb683b8ccd9ec21c5da2 270 Gene3D G3DSA:1.10.287.110 1 80 8.9E-20 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_3629 77981e83a7e5fb683b8ccd9ec21c5da2 270 SMART SM00271 3 61 3.3E-11 T 15-10-2018 IPR001623 DnaJ domain THII_3629 77981e83a7e5fb683b8ccd9ec21c5da2 270 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 15-10-2018 IPR018253 DnaJ domain, conserved site THII_3629 77981e83a7e5fb683b8ccd9ec21c5da2 270 Pfam PF00226 DnaJ domain 5 66 1.8E-17 T 15-10-2018 IPR001623 DnaJ domain THII_3629 77981e83a7e5fb683b8ccd9ec21c5da2 270 SUPERFAMILY SSF46565 3 76 2.36E-17 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_2139 c067efb2023f1253b580b60a12bada23 418 PIRSF PIRSF000151 1 418 4.4E-178 T 15-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 THII_2139 c067efb2023f1253b580b60a12bada23 418 Pfam PF00171 Aldehyde dehydrogenase family 10 284 1.0E-16 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 THII_2139 c067efb2023f1253b580b60a12bada23 418 Pfam PF00171 Aldehyde dehydrogenase family 308 374 1.1E-6 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 THII_2139 c067efb2023f1253b580b60a12bada23 418 Gene3D G3DSA:3.40.605.10 13 414 1.4E-161 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 THII_2139 c067efb2023f1253b580b60a12bada23 418 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 407 8.1E-155 T 15-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 THII_2139 c067efb2023f1253b580b60a12bada23 418 SUPERFAMILY SSF53720 6 417 3.14E-119 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 THII_2139 c067efb2023f1253b580b60a12bada23 418 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 417 41.229 T 15-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 THII_2139 c067efb2023f1253b580b60a12bada23 418 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 324 346 - T 15-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 THII_2139 c067efb2023f1253b580b60a12bada23 418 Gene3D G3DSA:3.40.309.10 227 375 1.4E-161 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 SUPERFAMILY SSF56524 79 318 7.59E-60 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 SUPERFAMILY SSF81296 324 438 4.9E-31 T 15-10-2018 IPR014756 Immunoglobulin E-set THII_2320 7e798ea450590f884e1a2e91a14548b3 439 PRINTS PR00407 Eukaryotic molybdopterin domain signature 104 120 3.7E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 PRINTS PR00407 Eukaryotic molybdopterin domain signature 161 172 3.7E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 PRINTS PR00407 Eukaryotic molybdopterin domain signature 360 372 3.7E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 PRINTS PR00407 Eukaryotic molybdopterin domain signature 419 432 3.7E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 PRINTS PR00407 Eukaryotic molybdopterin domain signature 257 270 3.7E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 PRINTS PR00407 Eukaryotic molybdopterin domain signature 240 256 3.7E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 PRINTS PR00407 Eukaryotic molybdopterin domain signature 273 286 3.7E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 PRINTS PR00407 Eukaryotic molybdopterin domain signature 405 417 3.7E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 PRINTS PR00407 Eukaryotic molybdopterin domain signature 84 98 3.7E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 PRINTS PR00407 Eukaryotic molybdopterin domain signature 321 333 3.7E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 Pfam PF00174 Oxidoreductase molybdopterin binding domain 124 292 1.4E-47 T 15-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 Gene3D G3DSA:2.60.40.650 323 439 6.6E-32 T 15-10-2018 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 Gene3D G3DSA:3.90.420.10 65 318 1.2E-70 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 THII_2320 7e798ea450590f884e1a2e91a14548b3 439 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 320 438 5.7E-16 T 15-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 THII_2570 3fab3b6b53346e3d4881fa6a2c302753 192 PIRSF PIRSF006102 1 192 2.2E-59 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_2570 3fab3b6b53346e3d4881fa6a2c302753 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 3.6E-60 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_2570 3fab3b6b53346e3d4881fa6a2c302753 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 9.7E-86 T 15-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 THII_2570 3fab3b6b53346e3d4881fa6a2c302753 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 25.908 T 15-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 THII_2650 8bf12eac8deead74a5266b49c59fad37 770 SUPERFAMILY SSF55816 538 757 1.83E-22 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_2650 8bf12eac8deead74a5266b49c59fad37 770 Gene3D G3DSA:3.90.780.10 535 766 9.6E-21 T 15-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_2650 8bf12eac8deead74a5266b49c59fad37 770 SUPERFAMILY SSF56300 187 487 1.27E-41 T 15-10-2018 THII_2650 8bf12eac8deead74a5266b49c59fad37 770 Pfam PF00149 Calcineurin-like phosphoesterase 192 426 4.9E-6 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 THII_2650 8bf12eac8deead74a5266b49c59fad37 770 Gene3D G3DSA:3.60.21.10 186 511 1.7E-44 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like THII_2650 8bf12eac8deead74a5266b49c59fad37 770 Pfam PF02872 5'-nucleotidase, C-terminal domain 539 710 1.2E-18 T 15-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_2650 8bf12eac8deead74a5266b49c59fad37 770 PRINTS PR01607 Apyrase family signature 190 208 3.1E-12 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_2650 8bf12eac8deead74a5266b49c59fad37 770 PRINTS PR01607 Apyrase family signature 595 618 3.1E-12 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_2650 8bf12eac8deead74a5266b49c59fad37 770 PRINTS PR01607 Apyrase family signature 441 461 3.1E-12 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_2650 8bf12eac8deead74a5266b49c59fad37 770 PRINTS PR01607 Apyrase family signature 373 390 3.1E-12 T 15-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 THII_2699 21c3f2ea45a1c6bc6d8ed9ae4bd6463d 133 SMART SM00448 10 123 1.2E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2699 21c3f2ea45a1c6bc6d8ed9ae4bd6463d 133 SUPERFAMILY SSF52172 8 127 3.7E-27 T 15-10-2018 IPR011006 CheY-like superfamily THII_2699 21c3f2ea45a1c6bc6d8ed9ae4bd6463d 133 Pfam PF00072 Response regulator receiver domain 12 123 3.6E-16 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2699 21c3f2ea45a1c6bc6d8ed9ae4bd6463d 133 Gene3D G3DSA:3.40.50.12740 10 132 2.7E-26 T 15-10-2018 THII_0038 7e297293619b8be367abf3a9b46c1a4b 238 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 13 230 4.2E-43 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0038 7e297293619b8be367abf3a9b46c1a4b 238 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 11 238 37.96 T 15-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0038 7e297293619b8be367abf3a9b46c1a4b 238 SMART SM00934 13 233 3.5E-89 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0038 7e297293619b8be367abf3a9b46c1a4b 238 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 232 1.5E-56 T 15-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_0038 7e297293619b8be367abf3a9b46c1a4b 238 Gene3D G3DSA:3.20.20.70 12 238 1.7E-80 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0038 7e297293619b8be367abf3a9b46c1a4b 238 SUPERFAMILY SSF51366 11 236 8.12E-71 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 THII_0038 7e297293619b8be367abf3a9b46c1a4b 238 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 65 78 - T 15-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_2036 a779c08803db3d5cf8ca6c5b387d5b04 103 SUPERFAMILY SSF81301 7 96 5.38E-14 T 15-10-2018 THII_2036 a779c08803db3d5cf8ca6c5b387d5b04 103 Pfam PF01909 Nucleotidyltransferase domain 9 84 1.4E-7 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 THII_2036 a779c08803db3d5cf8ca6c5b387d5b04 103 Gene3D G3DSA:3.30.460.10 1 100 8.7E-26 T 15-10-2018 THII_2832 c7f80fa02ac67f5819bb103834ef93b4 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 48 3.1E-8 T 15-10-2018 THII_2832 c7f80fa02ac67f5819bb103834ef93b4 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 60 2.9E-12 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_2832 c7f80fa02ac67f5819bb103834ef93b4 84 SUPERFAMILY SSF143120 1 53 2.62E-11 T 15-10-2018 IPR036165 YefM-like superfamily THII_2832 c7f80fa02ac67f5819bb103834ef93b4 84 Gene3D G3DSA:3.40.1620.40 1 53 1.2E-5 T 15-10-2018 THII_3539 7e7872cb10297286a401cdb2fe4ca12c 950 Gene3D G3DSA:2.160.20.10 23 131 5.0E-18 T 15-10-2018 IPR012334 Pectin lyase fold THII_3539 7e7872cb10297286a401cdb2fe4ca12c 950 SUPERFAMILY SSF51126 41 677 5.61E-34 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_3539 7e7872cb10297286a401cdb2fe4ca12c 950 SMART SM00710 605 626 2200.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_3539 7e7872cb10297286a401cdb2fe4ca12c 950 SMART SM00710 661 686 6400.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_3539 7e7872cb10297286a401cdb2fe4ca12c 950 SMART SM00710 579 601 48.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_3539 7e7872cb10297286a401cdb2fe4ca12c 950 SMART SM00710 635 657 170.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_3539 7e7872cb10297286a401cdb2fe4ca12c 950 SMART SM00710 363 384 6500.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_3539 7e7872cb10297286a401cdb2fe4ca12c 950 SMART SM00710 434 463 8400.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_3539 7e7872cb10297286a401cdb2fe4ca12c 950 SMART SM00710 504 531 2100.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_3539 7e7872cb10297286a401cdb2fe4ca12c 950 SMART SM00710 464 486 630.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_3539 7e7872cb10297286a401cdb2fe4ca12c 950 Gene3D G3DSA:2.160.20.10 313 781 7.0E-20 T 15-10-2018 IPR012334 Pectin lyase fold THII_0503 ae2580a86776ab902f22b1ceda1de373 348 SUPERFAMILY SSF143631 26 332 3.27E-74 T 15-10-2018 IPR003374 ApbE-like superfamily THII_0503 ae2580a86776ab902f22b1ceda1de373 348 Pfam PF02424 ApbE family 33 312 3.4E-67 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 THII_0503 ae2580a86776ab902f22b1ceda1de373 348 PIRSF PIRSF006268 1 337 2.0E-78 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 THII_0503 ae2580a86776ab902f22b1ceda1de373 348 Gene3D G3DSA:3.10.520.20 19 340 6.3E-83 T 15-10-2018 THII_3540 f42af5009ad3ddca6a35079f05abc873 140 SUPERFAMILY SSF56784 3 125 6.03E-15 T 15-10-2018 IPR036412 HAD-like superfamily THII_3540 f42af5009ad3ddca6a35079f05abc873 140 Pfam PF03031 NLI interacting factor-like phosphatase 8 134 9.5E-10 T 15-10-2018 IPR004274 FCP1 homology domain THII_3540 f42af5009ad3ddca6a35079f05abc873 140 Gene3D G3DSA:3.40.50.1000 1 139 3.0E-12 T 15-10-2018 IPR023214 HAD superfamily THII_0962 645699c66017eebcbdcdab34cbc04ea5 498 Pfam PF04851 Type III restriction enzyme, res subunit 94 231 2.6E-20 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 THII_0962 645699c66017eebcbdcdab34cbc04ea5 498 Pfam PF00271 Helicase conserved C-terminal domain 367 469 1.7E-14 T 15-10-2018 IPR001650 Helicase, C-terminal THII_0962 645699c66017eebcbdcdab34cbc04ea5 498 SMART SM00487 91 253 1.4E-18 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_0962 645699c66017eebcbdcdab34cbc04ea5 498 SUPERFAMILY SSF52540 135 491 3.45E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0962 645699c66017eebcbdcdab34cbc04ea5 498 SMART SM00490 390 470 3.3E-11 T 15-10-2018 IPR001650 Helicase, C-terminal THII_0962 645699c66017eebcbdcdab34cbc04ea5 498 Gene3D G3DSA:3.40.50.300 84 250 8.4E-39 T 15-10-2018 THII_0383 f73c57dfa0c911a849b8b0f00fd2fa10 243 SUPERFAMILY SSF52540 4 220 2.45E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0383 f73c57dfa0c911a849b8b0f00fd2fa10 243 SMART SM00382 32 201 8.8E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0383 f73c57dfa0c911a849b8b0f00fd2fa10 243 Pfam PF00005 ABC transporter 23 151 8.4E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_0383 f73c57dfa0c911a849b8b0f00fd2fa10 243 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_0383 f73c57dfa0c911a849b8b0f00fd2fa10 243 Gene3D G3DSA:3.40.50.300 2 240 8.9E-56 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 Gene3D G3DSA:3.80.10.10 153 251 1.9E-30 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 Gene3D G3DSA:3.80.10.10 252 357 2.5E-21 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SUPERFAMILY SSF49265 361 439 1.54E-13 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 PRINTS PR01217 Proline rich extensin signature 516 533 8.1E-12 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 PRINTS PR01217 Proline rich extensin signature 473 494 8.1E-12 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 PRINTS PR01217 Proline rich extensin signature 461 473 8.1E-12 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 PRINTS PR01217 Proline rich extensin signature 494 510 8.1E-12 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 Gene3D G3DSA:2.60.40.10 831 937 1.1E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00365 67 89 20.0 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00365 232 254 69.0 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00365 255 277 2.5 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00365 113 135 390.0 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00365 278 300 160.0 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00060 359 442 3.8E-8 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 PRINTS PR00019 Leucine-rich repeat signature 255 268 1.1E-5 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 PRINTS PR00019 Leucine-rich repeat signature 235 248 1.1E-5 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 Pfam PF00560 Leucine Rich Repeat 163 182 0.41 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SUPERFAMILY SSF52058 26 347 5.03E-59 T 15-10-2018 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 Pfam PF00041 Fibronectin type III domain 361 437 3.4E-11 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00369 209 232 200.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00369 255 278 21.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00369 113 136 100.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00369 323 346 54.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00369 67 90 100.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 SMART SM00369 185 208 67.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 Gene3D G3DSA:2.60.40.10 358 461 4.2E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2672 b81570c1e7f1cb4f3574d6666703d235 1047 Gene3D G3DSA:3.80.10.10 2 152 5.8E-30 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 PRINTS PR01032 Gene IV protein signature 378 401 4.5E-10 T 15-10-2018 THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 PRINTS PR01032 Gene IV protein signature 547 569 4.5E-10 T 15-10-2018 THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 PRINTS PR01032 Gene IV protein signature 494 522 4.5E-10 T 15-10-2018 THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 PRINTS PR00811 Bacterial general secretion pathway protein D signature 431 441 1.6E-35 T 15-10-2018 IPR001775 GspD/PilQ family THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 PRINTS PR00811 Bacterial general secretion pathway protein D signature 531 549 1.6E-35 T 15-10-2018 IPR001775 GspD/PilQ family THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 PRINTS PR00811 Bacterial general secretion pathway protein D signature 396 420 1.6E-35 T 15-10-2018 IPR001775 GspD/PilQ family THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 PRINTS PR00811 Bacterial general secretion pathway protein D signature 310 320 1.6E-35 T 15-10-2018 IPR001775 GspD/PilQ family THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 PRINTS PR00811 Bacterial general secretion pathway protein D signature 554 568 1.6E-35 T 15-10-2018 IPR001775 GspD/PilQ family THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 Gene3D G3DSA:3.30.1370.120 230 308 1.7E-18 T 15-10-2018 IPR038591 NolW-like superfamily THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 Gene3D G3DSA:3.30.1370.120 1 150 1.2E-56 T 15-10-2018 IPR038591 NolW-like superfamily THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 Gene3D G3DSA:3.30.1370.120 154 224 8.5E-18 T 15-10-2018 IPR038591 NolW-like superfamily THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 Pfam PF00263 Bacterial type II and III secretion system protein 400 567 9.1E-50 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 2 571 7.5E-170 T 15-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 Pfam PF03958 Bacterial type II/III secretion system short domain 92 149 9.7E-10 T 15-10-2018 IPR005644 NolW-like THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 Pfam PF03958 Bacterial type II/III secretion system short domain 232 310 2.4E-19 T 15-10-2018 IPR005644 NolW-like THII_0589 0f29ea5d67dbb0f4eb8b3f13f8edc2a4 635 Pfam PF03958 Bacterial type II/III secretion system short domain 156 226 5.3E-11 T 15-10-2018 IPR005644 NolW-like THII_3582 fd3d67b498cbcbf1186b538cf48ad584 343 Gene3D G3DSA:3.30.160.60 291 327 6.7E-9 T 15-10-2018 THII_3582 fd3d67b498cbcbf1186b538cf48ad584 343 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 318 6.7E-83 T 15-10-2018 IPR003770 Endolytic murein transglycosylase THII_3582 fd3d67b498cbcbf1186b538cf48ad584 343 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 1 321 32.013 T 15-10-2018 IPR003770 Endolytic murein transglycosylase THII_3582 fd3d67b498cbcbf1186b538cf48ad584 343 Pfam PF02618 YceG-like family 30 315 1.2E-77 T 15-10-2018 IPR003770 Endolytic murein transglycosylase THII_3156 d0bdb1adbc095fcff9dbe42dacaaf6ef 343 SUPERFAMILY SSF48576 10 323 1.44E-62 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily THII_3156 d0bdb1adbc095fcff9dbe42dacaaf6ef 343 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 156 171 - T 15-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 THII_3156 d0bdb1adbc095fcff9dbe42dacaaf6ef 343 Pfam PF00494 Squalene/phytoene synthase 18 308 9.0E-54 T 15-10-2018 THII_3156 d0bdb1adbc095fcff9dbe42dacaaf6ef 343 Gene3D G3DSA:1.10.600.10 8 340 1.3E-97 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily THII_2306 7f7f13d5dd2fd60a3def8fd58f5fcd50 190 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 179 34.512 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 THII_2306 7f7f13d5dd2fd60a3def8fd58f5fcd50 190 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 108 118 - T 15-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 THII_2306 7f7f13d5dd2fd60a3def8fd58f5fcd50 190 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 186 2.9E-60 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 THII_2306 7f7f13d5dd2fd60a3def8fd58f5fcd50 190 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 15-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 THII_2306 7f7f13d5dd2fd60a3def8fd58f5fcd50 190 Gene3D G3DSA:3.40.50.1470 1 190 1.3E-64 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 THII_2306 7f7f13d5dd2fd60a3def8fd58f5fcd50 190 Pfam PF01195 Peptidyl-tRNA hydrolase 5 185 3.6E-55 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 THII_2306 7f7f13d5dd2fd60a3def8fd58f5fcd50 190 SUPERFAMILY SSF53178 3 186 1.12E-64 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 THII_0304 2629aa1c42d63f8ee598fa8a4f30816f 67 Gene3D G3DSA:1.10.287.310 1 61 4.2E-24 T 15-10-2018 THII_0304 2629aa1c42d63f8ee598fa8a4f30816f 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.2E-17 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0304 2629aa1c42d63f8ee598fa8a4f30816f 67 SUPERFAMILY SSF46561 1 63 6.67E-20 T 15-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0304 2629aa1c42d63f8ee598fa8a4f30816f 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.769 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0304 2629aa1c42d63f8ee598fa8a4f30816f 67 Pfam PF00831 Ribosomal L29 protein 4 60 9.4E-20 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0017 f85c6c54b8fb49705e7c9d45c54a4b84 1008 Gene3D G3DSA:3.60.10.10 564 873 6.8E-35 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_0017 f85c6c54b8fb49705e7c9d45c54a4b84 1008 Pfam PF13205 Bacterial Ig-like domain 199 299 6.0E-12 T 15-10-2018 IPR032812 SbsA, Ig-like domain THII_0017 f85c6c54b8fb49705e7c9d45c54a4b84 1008 Pfam PF00932 Lamin Tail Domain 22 132 6.1E-12 T 15-10-2018 IPR001322 Lamin tail domain THII_0017 f85c6c54b8fb49705e7c9d45c54a4b84 1008 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 567 866 1.7E-6 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase THII_0017 f85c6c54b8fb49705e7c9d45c54a4b84 1008 SUPERFAMILY SSF56219 564 871 7.07E-34 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_0687 e1ecf228a27ce6aec124bd0bf2c854b5 370 Pfam PF06580 Histidine kinase 173 251 4.0E-24 T 15-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 THII_0687 e1ecf228a27ce6aec124bd0bf2c854b5 370 SUPERFAMILY SSF55874 228 318 8.53E-6 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0687 e1ecf228a27ce6aec124bd0bf2c854b5 370 Gene3D G3DSA:3.30.565.10 226 359 1.8E-7 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 Gene3D G3DSA:3.30.565.10 220 368 3.4E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 SMART SM00387 260 368 5.3E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 Pfam PF00072 Response regulator receiver domain 11 121 1.4E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 SMART SM00388 147 217 5.6E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 SUPERFAMILY SSF55874 215 367 1.07E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 SMART SM00448 8 121 3.7E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 Pfam PF00512 His Kinase A (phospho-acceptor) domain 148 212 6.2E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 SUPERFAMILY SSF52172 6 141 9.96E-38 T 15-10-2018 IPR011006 CheY-like superfamily THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 Gene3D G3DSA:3.40.50.2300 2 137 1.0E-35 T 15-10-2018 THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 Gene3D G3DSA:1.10.287.130 138 218 1.2E-11 T 15-10-2018 THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 1.3E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 326 1.3E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 367 1.3E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 348 1.3E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 SUPERFAMILY SSF47384 133 212 9.42E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1849 6c59a6b8d4bf605e0001be567041ef85 368 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 264 367 7.8E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0129 b0937160d396fd04a30eac4f7aafe273 325 PIRSF PIRSF002849 2 325 5.0E-129 T 15-10-2018 THII_0129 b0937160d396fd04a30eac4f7aafe273 325 Gene3D G3DSA:1.10.8.300 213 321 3.3E-30 T 15-10-2018 THII_0129 b0937160d396fd04a30eac4f7aafe273 325 Gene3D G3DSA:3.40.50.300 10 212 3.2E-51 T 15-10-2018 THII_0129 b0937160d396fd04a30eac4f7aafe273 325 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 47 177 5.7E-63 T 15-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 THII_0129 b0937160d396fd04a30eac4f7aafe273 325 SUPERFAMILY SSF52540 10 300 3.39E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 Gene3D G3DSA:3.90.930.12 1 82 1.2E-27 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.7E-34 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.7E-34 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.7E-34 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.86 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 PIRSF PIRSF002162 1 177 5.8E-49 T 15-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 Gene3D G3DSA:3.90.930.12 83 177 6.2E-40 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 15-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.4E-74 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 SUPERFAMILY SSF56053 83 177 1.76E-36 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 Pfam PF00347 Ribosomal protein L6 12 82 2.3E-15 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 Pfam PF00347 Ribosomal protein L6 90 164 1.3E-21 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0297 d8ad944f34e93e23ba6aa6a0889c578e 177 SUPERFAMILY SSF56053 1 82 4.73E-22 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0016 061fbf3a069514dc4b4bf68fe544f5bf 540 Gene3D G3DSA:2.60.40.10 436 535 1.2E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3849 a7286e70ed3495102fd713d8d3a42a8b 166 SUPERFAMILY SSF54523 22 107 1.49E-10 T 15-10-2018 THII_3849 a7286e70ed3495102fd713d8d3a42a8b 166 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3849 a7286e70ed3495102fd713d8d3a42a8b 166 Pfam PF07963 Prokaryotic N-terminal methylation motif 20 41 3.2E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3849 a7286e70ed3495102fd713d8d3a42a8b 166 Gene3D G3DSA:3.30.700.10 22 155 6.0E-8 T 15-10-2018 THII_3849 a7286e70ed3495102fd713d8d3a42a8b 166 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 41 2.8E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_1314 97b7c975a17b7d60c8a314d2c262bf13 226 SUPERFAMILY SSF52540 5 224 1.43E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1314 97b7c975a17b7d60c8a314d2c262bf13 226 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 1.6E-98 T 15-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 THII_1314 97b7c975a17b7d60c8a314d2c262bf13 226 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_1314 97b7c975a17b7d60c8a314d2c262bf13 226 Gene3D G3DSA:3.40.50.300 3 226 2.3E-63 T 15-10-2018 THII_1314 97b7c975a17b7d60c8a314d2c262bf13 226 SMART SM00382 34 225 3.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1314 97b7c975a17b7d60c8a314d2c262bf13 226 Pfam PF00005 ABC transporter 25 173 7.9E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_3292 adcbe8fd115f8399ea951f6f8f6c483f 332 Gene3D G3DSA:2.130.10.10 24 180 2.9E-7 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3292 adcbe8fd115f8399ea951f6f8f6c483f 332 SUPERFAMILY SSF110296 15 175 4.18E-14 T 15-10-2018 THII_1672 f1dc50d7203006ed75dca1b09003dac4 152 Pfam PF01724 Domain of unknown function DUF29 6 143 1.4E-52 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1672 f1dc50d7203006ed75dca1b09003dac4 152 Gene3D G3DSA:1.20.1220.20 1 151 1.0E-29 T 15-10-2018 THII_1822 9424ab31a54af43b0bd344c88c4177b4 970 SUPERFAMILY SSF52200 4 147 1.44E-14 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_1822 9424ab31a54af43b0bd344c88c4177b4 970 Gene3D G3DSA:3.40.50.300 160 339 6.4E-10 T 15-10-2018 THII_1822 9424ab31a54af43b0bd344c88c4177b4 970 PRINTS PR00364 Disease resistance protein signature 198 213 4.3E-6 T 15-10-2018 THII_1822 9424ab31a54af43b0bd344c88c4177b4 970 PRINTS PR00364 Disease resistance protein signature 380 394 4.3E-6 T 15-10-2018 THII_1822 9424ab31a54af43b0bd344c88c4177b4 970 PRINTS PR00364 Disease resistance protein signature 278 292 4.3E-6 T 15-10-2018 THII_1822 9424ab31a54af43b0bd344c88c4177b4 970 SUPERFAMILY SSF52540 168 401 8.72E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1822 9424ab31a54af43b0bd344c88c4177b4 970 SUPERFAMILY SSF48452 773 948 2.25E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1822 9424ab31a54af43b0bd344c88c4177b4 970 Pfam PF13676 TIR domain 7 109 7.5E-14 T 15-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 THII_1822 9424ab31a54af43b0bd344c88c4177b4 970 Gene3D G3DSA:3.40.50.10140 3 153 2.9E-14 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_1822 9424ab31a54af43b0bd344c88c4177b4 970 Gene3D G3DSA:1.25.40.10 659 883 6.1E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0927 a8682caf877717da750b3f0653e07056 483 Gene3D G3DSA:3.40.720.10 28 481 1.7E-130 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 THII_0927 a8682caf877717da750b3f0653e07056 483 SUPERFAMILY SSF53649 42 474 7.2E-105 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 THII_0927 a8682caf877717da750b3f0653e07056 483 ProSitePatterns PS00523 Sulfatases signature 1. 88 100 - T 15-10-2018 IPR024607 Sulfatase, conserved site THII_0927 a8682caf877717da750b3f0653e07056 483 Pfam PF00884 Sulfatase 42 372 1.1E-60 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 THII_0927 a8682caf877717da750b3f0653e07056 483 Pfam PF16347 Domain of unknown function (DUF4976) 378 474 8.7E-8 T 15-10-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 THII_1896 c05557e4ad428375432b60f02592fc15 317 SUPERFAMILY SSF53850 37 299 1.74E-77 T 15-10-2018 THII_1896 c05557e4ad428375432b60f02592fc15 317 Gene3D G3DSA:3.40.190.10 39 296 5.0E-99 T 15-10-2018 THII_1896 c05557e4ad428375432b60f02592fc15 317 Gene3D G3DSA:3.40.190.100 119 231 5.0E-99 T 15-10-2018 THII_1896 c05557e4ad428375432b60f02592fc15 317 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 38 287 3.3E-64 T 15-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 THII_2439 1adba887909b440527390219dfdb41c0 691 PRINTS PR00625 DnaJ domain signature 41 61 2.0E-17 T 15-10-2018 IPR001623 DnaJ domain THII_2439 1adba887909b440527390219dfdb41c0 691 PRINTS PR00625 DnaJ domain signature 25 40 2.0E-17 T 15-10-2018 IPR001623 DnaJ domain THII_2439 1adba887909b440527390219dfdb41c0 691 PRINTS PR00625 DnaJ domain signature 7 25 2.0E-17 T 15-10-2018 IPR001623 DnaJ domain THII_2439 1adba887909b440527390219dfdb41c0 691 Pfam PF00226 DnaJ domain 5 65 3.4E-22 T 15-10-2018 IPR001623 DnaJ domain THII_2439 1adba887909b440527390219dfdb41c0 691 SMART SM00271 4 61 2.3E-24 T 15-10-2018 IPR001623 DnaJ domain THII_2439 1adba887909b440527390219dfdb41c0 691 SUPERFAMILY SSF46565 1 72 9.29E-25 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_2439 1adba887909b440527390219dfdb41c0 691 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 15-10-2018 IPR018253 DnaJ domain, conserved site THII_2439 1adba887909b440527390219dfdb41c0 691 Gene3D G3DSA:1.10.287.110 2 98 2.3E-25 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_3268 bcbc88e01016512b65b055a99c6fe316 315 SUPERFAMILY SSF54523 9 81 6.75E-5 T 15-10-2018 THII_3268 bcbc88e01016512b65b055a99c6fe316 315 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 29 1.4E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3268 bcbc88e01016512b65b055a99c6fe316 315 Pfam PF16074 Type IV Pilus-assembly protein W 187 312 9.9E-14 T 15-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 THII_3268 bcbc88e01016512b65b055a99c6fe316 315 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 28 6.5E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2269 12feced8200cf222dae834d9c1093ca7 95 Gene3D G3DSA:3.40.50.1010 4 95 1.1E-19 T 15-10-2018 THII_2269 12feced8200cf222dae834d9c1093ca7 95 SUPERFAMILY SSF88723 9 94 4.77E-15 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2269 12feced8200cf222dae834d9c1093ca7 95 Pfam PF01850 PIN domain 20 81 1.2E-5 T 15-10-2018 IPR002716 PIN domain THII_0543 ce1da1b13cc086693b60d0b0e4f7d725 477 Pfam PF04317 YcjX-like family, DUF463 34 477 1.2E-171 T 15-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein THII_0543 ce1da1b13cc086693b60d0b0e4f7d725 477 PIRSF PIRSF019381 8 477 1.5E-179 T 15-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein THII_1974 9397858cfa28f86dd285462d13c9c768 302 PRINTS PR01021 OMPA domain signature 194 216 6.0E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_1974 9397858cfa28f86dd285462d13c9c768 302 PRINTS PR01021 OMPA domain signature 224 239 6.0E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_1974 9397858cfa28f86dd285462d13c9c768 302 PRINTS PR01021 OMPA domain signature 239 255 6.0E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_1974 9397858cfa28f86dd285462d13c9c768 302 Pfam PF02412 Thrombospondin type 3 repeat 110 129 0.0016 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_1974 9397858cfa28f86dd285462d13c9c768 302 Pfam PF02412 Thrombospondin type 3 repeat 76 92 0.027 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_1974 9397858cfa28f86dd285462d13c9c768 302 Pfam PF02412 Thrombospondin type 3 repeat 143 163 0.0014 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_1974 9397858cfa28f86dd285462d13c9c768 302 SUPERFAMILY SSF103647 57 131 6.02E-10 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_1974 9397858cfa28f86dd285462d13c9c768 302 Gene3D G3DSA:3.30.1330.60 180 299 3.9E-26 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_1974 9397858cfa28f86dd285462d13c9c768 302 Pfam PF00691 OmpA family 193 275 1.6E-14 T 15-10-2018 IPR006665 OmpA-like domain THII_1974 9397858cfa28f86dd285462d13c9c768 302 SUPERFAMILY SSF103647 142 178 5.36E-8 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_1974 9397858cfa28f86dd285462d13c9c768 302 SUPERFAMILY SSF103088 182 296 1.7E-22 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_2022 43619f4903c289e7be81bf0bf7a250b8 366 Pfam PF13699 Domain of unknown function (DUF4157) 65 141 5.4E-32 T 15-10-2018 IPR025295 Domain of unknown function DUF4157 THII_0772 5807ceb825f51007a26adf0ae30bd2f8 658 Pfam PF11992 Domain of unknown function (DUF3488) 17 329 1.3E-103 T 15-10-2018 IPR021878 Protein of unknown function DUF3488 THII_0772 5807ceb825f51007a26adf0ae30bd2f8 658 SUPERFAMILY SSF54001 279 608 1.4E-63 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily THII_0772 5807ceb825f51007a26adf0ae30bd2f8 658 SMART SM00460 404 475 4.6E-25 T 15-10-2018 IPR002931 Transglutaminase-like THII_0772 5807ceb825f51007a26adf0ae30bd2f8 658 Pfam PF13559 Domain of unknown function (DUF4129) 589 656 7.6E-9 T 15-10-2018 IPR025403 Domain of unknown function DUF4129 THII_0772 5807ceb825f51007a26adf0ae30bd2f8 658 Pfam PF01841 Transglutaminase-like superfamily 359 473 4.1E-23 T 15-10-2018 IPR002931 Transglutaminase-like THII_0772 5807ceb825f51007a26adf0ae30bd2f8 658 Gene3D G3DSA:3.10.620.30 341 496 1.5E-23 T 15-10-2018 THII_0798 189cd714f41ed6889f3c6438b35a23c2 738 Pfam PF13807 G-rich domain on putative tyrosine kinase 394 468 7.1E-12 T 15-10-2018 IPR032807 Tyrosine kinase, G-rich domain THII_0798 189cd714f41ed6889f3c6438b35a23c2 738 Gene3D G3DSA:3.40.50.300 463 735 1.6E-76 T 15-10-2018 THII_0798 189cd714f41ed6889f3c6438b35a23c2 738 SUPERFAMILY SSF52540 540 720 7.09E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0798 189cd714f41ed6889f3c6438b35a23c2 738 Pfam PF13614 AAA domain 552 681 4.1E-10 T 15-10-2018 IPR025669 AAA domain THII_0798 189cd714f41ed6889f3c6438b35a23c2 738 Pfam PF02706 Chain length determinant protein 19 111 6.2E-13 T 15-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 THII_0798 189cd714f41ed6889f3c6438b35a23c2 738 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 521 725 5.9E-48 T 15-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 THII_3053 c2e1ad8bf2a3a09b05320ad7f7cf8672 3124 SMART SM00237 2309 2413 2.9E-13 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_3053 c2e1ad8bf2a3a09b05320ad7f7cf8672 3124 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 553 594 1.7E-6 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_3053 c2e1ad8bf2a3a09b05320ad7f7cf8672 3124 Gene3D G3DSA:2.60.40.2030 2324 2435 4.2E-26 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_3053 c2e1ad8bf2a3a09b05320ad7f7cf8672 3124 Pfam PF01345 Domain of unknown function DUF11 551 658 3.2E-6 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_3053 c2e1ad8bf2a3a09b05320ad7f7cf8672 3124 Pfam PF03160 Calx-beta domain 2325 2412 4.2E-14 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_3053 c2e1ad8bf2a3a09b05320ad7f7cf8672 3124 SUPERFAMILY SSF141072 2324 2436 4.32E-27 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_3305 0e33f0fecb8cfad5ea9160c50c91df3a 285 Gene3D G3DSA:3.40.50.150 53 215 7.7E-11 T 15-10-2018 THII_3305 0e33f0fecb8cfad5ea9160c50c91df3a 285 SUPERFAMILY SSF53335 64 179 3.8E-13 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3305 0e33f0fecb8cfad5ea9160c50c91df3a 285 Pfam PF13847 Methyltransferase domain 66 153 3.9E-7 T 15-10-2018 IPR025714 Methyltransferase domain THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SUPERFAMILY SSF49313 1573 1670 2.43E-7 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 Gene3D G3DSA:2.60.40.10 1053 1139 7.0E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 Gene3D G3DSA:2.60.40.10 837 921 6.1E-14 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 Gene3D G3DSA:2.60.40.10 924 1011 4.8E-14 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 Gene3D G3DSA:2.60.40.10 1142 1226 1.4E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 Pfam PF13205 Bacterial Ig-like domain 725 829 1.0E-10 T 15-10-2018 IPR032812 SbsA, Ig-like domain THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 Gene3D G3DSA:2.60.40.60 1576 1672 1.7E-5 T 15-10-2018 THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SUPERFAMILY SSF51126 389 714 3.3E-29 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 Gene3D G3DSA:2.60.40.10 295 386 1.9E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00060 1055 1128 1.9E-6 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00060 837 911 2.4E-8 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00060 925 1000 2.4E-8 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00060 1144 1217 5.7E-8 T 15-10-2018 IPR003961 Fibronectin type III GO:0005515 THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 Gene3D G3DSA:2.60.40.60 1367 1447 1.1E-8 T 15-10-2018 THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00710 497 526 1000.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00710 171 193 600.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00710 560 581 4600.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00710 754 776 8100.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00710 472 496 1700.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00710 99 124 590.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00710 128 149 22.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00710 1622 1653 7100.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SMART SM00710 380 405 4600.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SUPERFAMILY SSF51126 9 293 7.44E-32 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SUPERFAMILY SSF49313 1362 1443 2.0E-8 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 Pfam PF13229 Right handed beta helix region 96 229 8.2E-7 T 15-10-2018 IPR039448 Right handed beta helix domain THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SUPERFAMILY SSF49265 836 1008 1.03E-18 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 Gene3D G3DSA:2.160.20.10 387 716 1.3E-7 T 15-10-2018 IPR012334 Pectin lyase fold THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 Gene3D G3DSA:2.160.20.10 13 237 1.6E-5 T 15-10-2018 IPR012334 Pectin lyase fold THII_0745 46ab6ab25053adef68b09ba55cda0697 1904 SUPERFAMILY SSF49265 1055 1219 9.58E-23 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_2206 b1f2b2bf37c0d4ec6a75951125ae0006 387 SUPERFAMILY SSF56645 3 223 6.28E-61 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 THII_2206 b1f2b2bf37c0d4ec6a75951125ae0006 387 Gene3D G3DSA:1.10.540.10 1 112 3.3E-25 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 THII_2206 b1f2b2bf37c0d4ec6a75951125ae0006 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 222 365 5.9E-44 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 THII_2206 b1f2b2bf37c0d4ec6a75951125ae0006 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 114 204 3.9E-20 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 THII_2206 b1f2b2bf37c0d4ec6a75951125ae0006 387 Gene3D G3DSA:2.40.110.10 113 216 2.0E-30 T 15-10-2018 THII_2206 b1f2b2bf37c0d4ec6a75951125ae0006 387 SUPERFAMILY SSF47203 222 365 4.19E-47 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 THII_2206 b1f2b2bf37c0d4ec6a75951125ae0006 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 110 2.9E-21 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 THII_2206 b1f2b2bf37c0d4ec6a75951125ae0006 387 Gene3D G3DSA:1.20.140.10 219 382 1.0E-46 T 15-10-2018 THII_0681 bc01620ad6dc26b5f534bd72c478d997 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 266 7.3E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 THII_0681 bc01620ad6dc26b5f534bd72c478d997 268 SUPERFAMILY SSF161098 60 248 1.44E-23 T 15-10-2018 IPR035906 MetI-like superfamily THII_0681 bc01620ad6dc26b5f534bd72c478d997 268 Gene3D G3DSA:1.10.3720.10 56 264 6.3E-19 T 15-10-2018 IPR035906 MetI-like superfamily THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 457 1.6E-177 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 SUPERFAMILY SSF52374 2 312 7.24E-102 T 15-10-2018 THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 Gene3D G3DSA:3.40.50.620 1 305 1.5E-136 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 SUPERFAMILY SSF47323 316 457 3.27E-37 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 Pfam PF09190 DALR domain 341 402 3.8E-20 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 SMART SM00840 341 402 2.9E-24 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.118 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.6E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.6E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.6E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.6E-30 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 2.8E-133 T 15-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 THII_2971 75ced0fd2087d034d6757f7d37d937d1 459 Gene3D G3DSA:1.20.120.640 306 458 5.2E-46 T 15-10-2018 THII_0421 e0449cee64d947703d0acd0809796445 550 Gene3D G3DSA:1.10.3210.10 207 317 7.6E-20 T 15-10-2018 THII_0421 e0449cee64d947703d0acd0809796445 550 Gene3D G3DSA:1.10.3210.10 332 527 9.7E-31 T 15-10-2018 THII_0421 e0449cee64d947703d0acd0809796445 550 Pfam PF13487 HD domain 403 466 2.2E-21 T 15-10-2018 THII_0421 e0449cee64d947703d0acd0809796445 550 SMART SM00065 31 206 1.5E-15 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_0421 e0449cee64d947703d0acd0809796445 550 Pfam PF01590 GAF domain 33 196 6.3E-14 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_0421 e0449cee64d947703d0acd0809796445 550 Pfam PF01966 HD domain 229 300 1.3E-5 T 15-10-2018 IPR006674 HD domain THII_0421 e0449cee64d947703d0acd0809796445 550 SUPERFAMILY SSF55781 15 208 1.96E-23 T 15-10-2018 THII_0421 e0449cee64d947703d0acd0809796445 550 SUPERFAMILY SSF109604 218 515 3.33E-19 T 15-10-2018 THII_0421 e0449cee64d947703d0acd0809796445 550 Gene3D G3DSA:3.30.450.40 2 206 1.0E-34 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_0421 e0449cee64d947703d0acd0809796445 550 SMART SM00471 223 486 0.0014 T 15-10-2018 IPR003607 HD/PDEase domain THII_1193 542cec79025bde25dfb678ec981bd22c 350 Pfam PF10023 Putative aminopeptidase 21 342 2.9E-127 T 15-10-2018 IPR014553 Predicted aminopeptidase THII_1193 542cec79025bde25dfb678ec981bd22c 350 PIRSF PIRSF029285 1 349 2.3E-133 T 15-10-2018 IPR014553 Predicted aminopeptidase THII_3680 09e1f39e305ba9864e52a4085fa4afcf 840 SUPERFAMILY SSF48452 40 183 8.13E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3680 09e1f39e305ba9864e52a4085fa4afcf 840 SUPERFAMILY SSF48452 154 384 1.87E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3680 09e1f39e305ba9864e52a4085fa4afcf 840 Gene3D G3DSA:1.25.40.10 244 472 1.5E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3680 09e1f39e305ba9864e52a4085fa4afcf 840 Gene3D G3DSA:1.25.40.10 37 219 2.2E-17 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3680 09e1f39e305ba9864e52a4085fa4afcf 840 Pfam PF12770 CHAT domain 567 838 2.3E-65 T 15-10-2018 IPR024983 CHAT domain THII_3680 09e1f39e305ba9864e52a4085fa4afcf 840 SMART SM00028 35 68 170.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3680 09e1f39e305ba9864e52a4085fa4afcf 840 SMART SM00028 72 105 31.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3680 09e1f39e305ba9864e52a4085fa4afcf 840 SMART SM00028 316 349 180.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3680 09e1f39e305ba9864e52a4085fa4afcf 840 SMART SM00028 153 186 47.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3281 07cba4fa957c5d7d4d7ca32103a214b7 95 Gene3D G3DSA:3.30.1070.10 21 84 2.7E-25 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 THII_3281 07cba4fa957c5d7d4d7ca32103a214b7 95 Pfam PF03776 Septum formation topological specificity factor MinE 15 86 8.3E-22 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 THII_3281 07cba4fa957c5d7d4d7ca32103a214b7 95 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 87 5.1E-26 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 THII_3281 07cba4fa957c5d7d4d7ca32103a214b7 95 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 90 17.542 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 THII_3281 07cba4fa957c5d7d4d7ca32103a214b7 95 SUPERFAMILY SSF55229 38 88 4.71E-13 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 41 287 2.7E-66 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1972 2223 5.2E-78 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 773 1010 7.1E-79 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Gene3D G3DSA:3.40.47.10 775 1363 1.1E-235 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Gene3D G3DSA:3.40.50.150 2705 2851 2.0E-22 T 15-10-2018 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SUPERFAMILY SSF53901 772 1188 4.25E-93 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SUPERFAMILY SSF53901 1970 2402 1.18E-87 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Gene3D G3DSA:3.40.50.720 1387 1814 1.2E-135 T 15-10-2018 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Gene3D G3DSA:1.10.1200.10 659 726 4.6E-12 T 15-10-2018 IPR036736 ACP-like superfamily THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Gene3D G3DSA:1.10.1200.10 1836 1913 2.0E-12 T 15-10-2018 IPR036736 ACP-like superfamily THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SUPERFAMILY SSF47336 656 785 1.27E-14 T 15-10-2018 IPR036736 ACP-like superfamily THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF13649 Methyltransferase domain 2720 2815 5.6E-14 T 15-10-2018 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SUPERFAMILY SSF53335 2717 2920 4.56E-24 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Gene3D G3DSA:3.30.70.3050 1255 1353 1.1E-235 T 15-10-2018 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Gene3D G3DSA:3.30.70.3050 2465 2563 5.1E-249 T 15-10-2018 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 ProSitePatterns PS00012 Phosphopantetheine attachment site. 684 699 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SMART SM00825 Beta-ketoacyl synthase 775 1193 5.5E-188 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SMART SM00825 Beta-ketoacyl synthase 43 472 1.3E-108 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SMART SM00825 Beta-ketoacyl synthase 1973 2407 7.0E-185 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Gene3D G3DSA:3.40.47.10 1973 2574 5.1E-249 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SUPERFAMILY SSF47336 1838 1911 4.71E-9 T 15-10-2018 IPR036736 ACP-like superfamily THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF08659 KR domain 1568 1757 4.0E-56 T 15-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SMART SM00823 Phosphopantetheine attachment site 1840 1910 7.9E-4 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SMART SM00823 Phosphopantetheine attachment site 658 729 2.3E-5 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SUPERFAMILY SSF51735 1568 1783 7.27E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF00550 Phosphopantetheine attachment site 1843 1906 5.0E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF00550 Phosphopantetheine attachment site 661 725 1.6E-13 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 423 523 1.4E-10 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1139 1228 2.0E-10 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2353 2472 5.3E-15 T 15-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1019 1135 2.7E-39 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 295 419 3.4E-22 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2232 2349 1.3E-40 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Gene3D G3DSA:3.30.70.3290 481 597 3.4E-172 T 15-10-2018 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 Gene3D G3DSA:3.40.47.10 43 613 3.4E-172 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SUPERFAMILY SSF53901 38 412 3.9E-63 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2208 45b08a41b70bc3b8d748463a7506b660 2925 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1568 1758 1.0E-46 T 15-10-2018 THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 Gene3D G3DSA:3.40.50.300 414 588 2.8E-48 T 15-10-2018 THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 SUPERFAMILY SSF46600 609 656 7.72E-13 T 15-10-2018 IPR036876 UVR domain superfamily THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 Pfam PF02151 UvrB/uvrC motif 622 653 2.4E-11 T 15-10-2018 IPR001943 UVR domain GO:0005515 THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 Gene3D G3DSA:3.40.50.300 1 234 2.8E-74 T 15-10-2018 THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 SMART SM00487 9 425 2.4E-29 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 Pfam PF00271 Helicase conserved C-terminal domain 441 543 8.1E-17 T 15-10-2018 IPR001650 Helicase, C-terminal THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 Gene3D G3DSA:3.40.50.300 261 413 1.8E-51 T 15-10-2018 THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 653 0.0 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 Pfam PF12344 Ultra-violet resistance protein B 551 592 1.2E-18 T 15-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 SUPERFAMILY SSF52540 33 582 7.12E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 SUPERFAMILY SSF52540 5 414 2.34E-137 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 SMART SM00490 459 545 1.5E-19 T 15-10-2018 IPR001650 Helicase, C-terminal THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 Pfam PF04851 Type III restriction enzyme, res subunit 12 87 1.7E-10 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 656 42.647 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 THII_3761 47739b89b2c1f190b86e80957bfe5f81 660 Gene3D G3DSA:4.10.860.10 604 660 1.5E-17 T 15-10-2018 THII_3894 010f4da8061966236fa23f004a59a964 162 Pfam PF04612 Type II secretion system (T2SS), protein M 2 157 5.6E-33 T 15-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 THII_3894 010f4da8061966236fa23f004a59a964 162 SUPERFAMILY SSF103054 81 157 9.29E-13 T 15-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily THII_3894 010f4da8061966236fa23f004a59a964 162 Gene3D G3DSA:3.30.1360.100 81 162 1.8E-12 T 15-10-2018 THII_3894 010f4da8061966236fa23f004a59a964 162 PIRSF PIRSF006291 1 160 2.2E-28 T 15-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 THII_1575 70baaec858c6a8d9c3cbbfefeed2081c 413 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 146 209 7.3E-10 T 15-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 THII_1575 70baaec858c6a8d9c3cbbfefeed2081c 413 Pfam PF01743 Poly A polymerase head domain 3 122 2.7E-17 T 15-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 THII_1575 70baaec858c6a8d9c3cbbfefeed2081c 413 Hamap MF_01262 CCA-adding enzyme [cca]. 1 398 41.839 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 THII_1575 70baaec858c6a8d9c3cbbfefeed2081c 413 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 404 51.742 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 THII_1575 70baaec858c6a8d9c3cbbfefeed2081c 413 SUPERFAMILY SSF81891 120 358 1.44E-52 T 15-10-2018 THII_1575 70baaec858c6a8d9c3cbbfefeed2081c 413 SUPERFAMILY SSF81301 1 118 7.19E-31 T 15-10-2018 THII_1575 70baaec858c6a8d9c3cbbfefeed2081c 413 Pfam PF01966 HD domain 227 320 1.4E-8 T 15-10-2018 IPR006674 HD domain THII_1575 70baaec858c6a8d9c3cbbfefeed2081c 413 Gene3D G3DSA:3.30.460.10 1 122 1.2E-28 T 15-10-2018 THII_1575 70baaec858c6a8d9c3cbbfefeed2081c 413 PIRSF PIRSF000813 1 405 1.7E-187 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 THII_1575 70baaec858c6a8d9c3cbbfefeed2081c 413 Gene3D G3DSA:1.10.3090.10 123 408 1.6E-39 T 15-10-2018 THII_2426 0c87779f3b2db4bd975738dbdcdd2f9b 412 SUPERFAMILY SSF103190 235 319 4.71E-11 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily THII_2426 0c87779f3b2db4bd975738dbdcdd2f9b 412 SUPERFAMILY SSF103190 39 236 2.51E-40 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily THII_2426 0c87779f3b2db4bd975738dbdcdd2f9b 412 SUPERFAMILY SSF158472 353 401 1.31E-8 T 15-10-2018 THII_2426 0c87779f3b2db4bd975738dbdcdd2f9b 412 Gene3D G3DSA:3.30.450.20 103 236 1.9E-38 T 15-10-2018 THII_2426 0c87779f3b2db4bd975738dbdcdd2f9b 412 Gene3D G3DSA:1.20.1480.50 313 410 3.7E-18 T 15-10-2018 THII_2426 0c87779f3b2db4bd975738dbdcdd2f9b 412 SMART SM00304 351 404 5.8E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2426 0c87779f3b2db4bd975738dbdcdd2f9b 412 Pfam PF02743 Cache domain 36 312 2.6E-13 T 15-10-2018 IPR033479 Double Cache domain 1 THII_2426 0c87779f3b2db4bd975738dbdcdd2f9b 412 Pfam PF00672 HAMP domain 353 396 7.2E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3271 6a285b5a6bb4bf4971502326989a90b2 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3271 6a285b5a6bb4bf4971502326989a90b2 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 32 3.0E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3271 6a285b5a6bb4bf4971502326989a90b2 155 Gene3D G3DSA:3.30.700.10 12 154 4.3E-21 T 15-10-2018 THII_3271 6a285b5a6bb4bf4971502326989a90b2 155 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 33 141 7.5E-17 T 15-10-2018 IPR031982 Type IV minor pilin ComP THII_3271 6a285b5a6bb4bf4971502326989a90b2 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 3.5E-8 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 THII_3271 6a285b5a6bb4bf4971502326989a90b2 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 3.5E-8 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 THII_3271 6a285b5a6bb4bf4971502326989a90b2 155 SUPERFAMILY SSF54523 12 125 1.2E-21 T 15-10-2018 THII_3271 6a285b5a6bb4bf4971502326989a90b2 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 3.0E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 1749 1847 1.9E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 1514 1609 7.5E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 952 1054 1.8E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 1406 1512 2.6E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 1172 1266 8.2E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 634 737 4.6E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 522 621 2.2E-12 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 851 945 8.3E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 286 395 4.8E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 748 848 2.4E-12 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 1055 1165 8.9E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SUPERFAMILY SSF49373 1176 1247 1.04E-9 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Pfam PF09134 Invasin, domain 3 751 848 1.5E-7 T 15-10-2018 IPR015217 Invasin, domain 3 THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SUPERFAMILY SSF49373 966 1039 3.4E-9 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SUPERFAMILY SSF49373 748 846 7.26E-13 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Gene3D G3DSA:2.60.40.10 1282 1388 3.3E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SUPERFAMILY SSF49373 850 942 8.37E-11 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 Pfam PF02369 Bacterial Ig-like domain (group 1) 533 609 1.9E-8 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SUPERFAMILY SSF49373 294 389 6.8E-5 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SUPERFAMILY SSF49373 1059 1165 1.71E-10 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SUPERFAMILY SSF49373 1421 1507 1.23E-7 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SUPERFAMILY SSF49373 1527 1603 7.06E-9 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SUPERFAMILY SSF49373 1286 1376 8.11E-6 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SUPERFAMILY SSF49373 528 609 8.24E-14 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SUPERFAMILY SSF49373 647 736 1.02E-9 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SMART SM00634 407 505 0.77 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SMART SM00634 1522 1608 0.0067 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SMART SM00634 957 1045 0.24 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SMART SM00634 1061 1158 0.21 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SMART SM00634 855 946 0.11 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SMART SM00634 1176 1265 0.24 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SMART SM00634 528 620 8.5E-14 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SMART SM00634 643 730 0.033 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3934 75dba8157227e820b0aa44b3a9babbad 2030 SMART SM00634 751 841 9.6E-4 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_0805 d3fce8d5381db4d377b4a8867a034b4a 213 Gene3D G3DSA:3.40.50.880 1 213 2.2E-70 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_0805 d3fce8d5381db4d377b4a8867a034b4a 213 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 212 3.2E-61 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 THII_0805 d3fce8d5381db4d377b4a8867a034b4a 213 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 213 34.418 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 THII_0805 d3fce8d5381db4d377b4a8867a034b4a 213 PIRSF PIRSF000495 2 213 4.8E-65 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 THII_0805 d3fce8d5381db4d377b4a8867a034b4a 213 SUPERFAMILY SSF52317 2 213 4.26E-52 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_0805 d3fce8d5381db4d377b4a8867a034b4a 213 Pfam PF00117 Glutamine amidotransferase class-I 6 211 4.1E-20 T 15-10-2018 IPR017926 Glutamine amidotransferase THII_2479 b5c63abdc49131306bc143aac1c2500c 591 Pfam PF08239 Bacterial SH3 domain 303 360 1.9E-8 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type THII_2479 b5c63abdc49131306bc143aac1c2500c 591 Gene3D G3DSA:2.30.30.40 285 365 1.5E-9 T 15-10-2018 THII_3880 cce3e6a691bd6bdb993c50f4c2708760 170 Gene3D G3DSA:2.40.30.60 1 93 5.5E-30 T 15-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 THII_3880 cce3e6a691bd6bdb993c50f4c2708760 170 SUPERFAMILY SSF50447 7 93 2.61E-19 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_3880 cce3e6a691bd6bdb993c50f4c2708760 170 SUPERFAMILY SSF50346 99 167 7.85E-17 T 15-10-2018 IPR011033 PRC-barrel-like superfamily THII_3880 cce3e6a691bd6bdb993c50f4c2708760 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 7 166 7.2E-45 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 THII_3880 cce3e6a691bd6bdb993c50f4c2708760 170 Pfam PF01782 RimM N-terminal domain 9 90 2.5E-18 T 15-10-2018 IPR002676 RimM, N-terminal GO:0006364 THII_3880 cce3e6a691bd6bdb993c50f4c2708760 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 6 168 21.319 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 THII_3880 cce3e6a691bd6bdb993c50f4c2708760 170 Pfam PF05239 PRC-barrel domain 96 162 4.8E-6 T 15-10-2018 IPR027275 PRC-barrel domain THII_3880 cce3e6a691bd6bdb993c50f4c2708760 170 Gene3D G3DSA:2.30.30.240 94 170 8.0E-25 T 15-10-2018 THII_2572 504b77b2b12e141eea50493a10764a47 507 Gene3D G3DSA:3.40.50.300 185 367 6.3E-67 T 15-10-2018 THII_2572 504b77b2b12e141eea50493a10764a47 507 SUPERFAMILY SSF46689 408 502 1.79E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_2572 504b77b2b12e141eea50493a10764a47 507 Gene3D G3DSA:1.10.10.60 452 507 2.7E-11 T 15-10-2018 THII_2572 504b77b2b12e141eea50493a10764a47 507 Gene3D G3DSA:3.30.450.40 5 174 3.1E-38 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_2572 504b77b2b12e141eea50493a10764a47 507 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 483 2.2E-9 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2572 504b77b2b12e141eea50493a10764a47 507 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 483 503 2.2E-9 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2572 504b77b2b12e141eea50493a10764a47 507 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 220 233 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_2572 504b77b2b12e141eea50493a10764a47 507 SMART SM00065 27 174 4.0E-16 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_2572 504b77b2b12e141eea50493a10764a47 507 SUPERFAMILY SSF55781 3 160 8.94E-22 T 15-10-2018 THII_2572 504b77b2b12e141eea50493a10764a47 507 Pfam PF02954 Bacterial regulatory protein, Fis family 464 498 2.6E-12 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2572 504b77b2b12e141eea50493a10764a47 507 Gene3D G3DSA:1.10.8.60 368 438 1.8E-22 T 15-10-2018 THII_2572 504b77b2b12e141eea50493a10764a47 507 SUPERFAMILY SSF52540 195 436 1.81E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2572 504b77b2b12e141eea50493a10764a47 507 Pfam PF00158 Sigma-54 interaction domain 196 362 5.4E-74 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 THII_2572 504b77b2b12e141eea50493a10764a47 507 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 408 417 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site THII_2572 504b77b2b12e141eea50493a10764a47 507 TIGRFAM TIGR01817 nifA: Nif-specific regulatory protein 11 440 5.0E-183 T 15-10-2018 IPR010113 Nif-specific regulatory protein GO:0003700|GO:0006355|GO:0009399 THII_2572 504b77b2b12e141eea50493a10764a47 507 SMART SM00382 216 359 1.2E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2572 504b77b2b12e141eea50493a10764a47 507 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 282 297 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_2572 504b77b2b12e141eea50493a10764a47 507 Pfam PF13185 GAF domain 26 161 4.5E-12 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_2718 bec69329ffa3227ae7a354f699648e29 357 Gene3D G3DSA:2.40.30.10 275 357 2.6E-29 T 15-10-2018 THII_2718 bec69329ffa3227ae7a354f699648e29 357 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 354 36.644 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 THII_2718 bec69329ffa3227ae7a354f699648e29 357 Gene3D G3DSA:2.30.30.280 206 273 1.7E-27 T 15-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 THII_2718 bec69329ffa3227ae7a354f699648e29 357 Gene3D G3DSA:3.40.50.620 1 205 4.7E-87 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_2718 bec69329ffa3227ae7a354f699648e29 357 SUPERFAMILY SSF52402 2 237 2.43E-51 T 15-10-2018 THII_2718 bec69329ffa3227ae7a354f699648e29 357 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2 353 1.0E-135 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 THII_2718 bec69329ffa3227ae7a354f699648e29 357 Pfam PF03054 tRNA methyl transferase 2 353 8.9E-134 T 15-10-2018 THII_0365 dfe770bc152f602517c62131bb43ca2d 212 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 206 54.135 T 15-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 THII_0365 dfe770bc152f602517c62131bb43ca2d 212 Pfam PF01634 ATP phosphoribosyltransferase 51 202 5.8E-50 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 THII_0365 dfe770bc152f602517c62131bb43ca2d 212 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 182 8.9E-58 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 THII_0365 dfe770bc152f602517c62131bb43ca2d 212 Gene3D G3DSA:3.40.190.10 4 197 2.5E-71 T 15-10-2018 THII_0365 dfe770bc152f602517c62131bb43ca2d 212 Gene3D G3DSA:3.40.190.10 93 174 2.5E-71 T 15-10-2018 THII_0365 dfe770bc152f602517c62131bb43ca2d 212 SUPERFAMILY SSF53850 1 204 4.34E-66 T 15-10-2018 THII_0365 dfe770bc152f602517c62131bb43ca2d 212 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 15-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 THII_0623 7c35558a7cdf64b2625eacae7fcc31e7 342 Gene3D G3DSA:3.40.1030.10 82 334 6.0E-61 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 THII_0623 7c35558a7cdf64b2625eacae7fcc31e7 342 SUPERFAMILY SSF52418 88 329 8.5E-62 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 THII_0623 7c35558a7cdf64b2625eacae7fcc31e7 342 Gene3D G3DSA:1.20.970.10 11 80 4.2E-23 T 15-10-2018 THII_0623 7c35558a7cdf64b2625eacae7fcc31e7 342 Pfam PF00591 Glycosyl transferase family, a/b domain 108 324 1.7E-8 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 THII_0623 7c35558a7cdf64b2625eacae7fcc31e7 342 SUPERFAMILY SSF47648 19 79 1.7E-15 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 THII_0623 7c35558a7cdf64b2625eacae7fcc31e7 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 22 78 2.5E-15 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 THII_1807 d9147802a3fb03613b7737341b40aa69 491 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 27 472 4.2E-197 T 15-10-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 THII_1807 d9147802a3fb03613b7737341b40aa69 491 Gene3D G3DSA:3.40.50.1980 206 344 1.1E-223 T 15-10-2018 THII_1807 d9147802a3fb03613b7737341b40aa69 491 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 12 478 1.5E-262 T 15-10-2018 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 THII_1807 d9147802a3fb03613b7737341b40aa69 491 SUPERFAMILY SSF53807 7 478 3.21E-164 T 15-10-2018 THII_1807 d9147802a3fb03613b7737341b40aa69 491 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 62 466 2.6E-110 T 15-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 THII_1807 d9147802a3fb03613b7737341b40aa69 491 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 152 166 - T 15-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 THII_1807 d9147802a3fb03613b7737341b40aa69 491 Gene3D G3DSA:3.40.50.1980 63 205 1.1E-223 T 15-10-2018 THII_1807 d9147802a3fb03613b7737341b40aa69 491 Gene3D G3DSA:3.40.50.1980 27 474 1.1E-223 T 15-10-2018 THII_1807 d9147802a3fb03613b7737341b40aa69 491 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 81 88 - T 15-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 THII_1666 d40df20a622d67edf3e03ad62a9289bb 144 Pfam PF01724 Domain of unknown function DUF29 4 141 9.1E-51 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1666 d40df20a622d67edf3e03ad62a9289bb 144 Gene3D G3DSA:1.20.1220.20 1 144 4.4E-29 T 15-10-2018 THII_2872 e7c15a819607099d1ac8f2208f9c31a5 105 Pfam PF14076 Domain of unknown function (DUF4258) 18 90 1.9E-14 T 15-10-2018 IPR025354 Protein of unknown function DUF4258 THII_2838 70af319b116e17956af21fd69e7675d3 118 Gene3D G3DSA:3.40.50.2300 1 117 2.3E-27 T 15-10-2018 THII_2838 70af319b116e17956af21fd69e7675d3 118 Pfam PF00072 Response regulator receiver domain 6 114 1.7E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2838 70af319b116e17956af21fd69e7675d3 118 SMART SM00448 4 116 3.6E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2838 70af319b116e17956af21fd69e7675d3 118 SUPERFAMILY SSF52172 1 116 1.71E-26 T 15-10-2018 IPR011006 CheY-like superfamily THII_2221 d22612f19b994f7bbb390eae33aeace3 63 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 58 5.3E-11 T 15-10-2018 IPR025161 Putative transposase IS4/IS5 family THII_1477 47082ce62cdf2aefd2b2fa7de67115e1 186 Gene3D G3DSA:3.90.1570.10 6 186 1.3E-12 T 15-10-2018 THII_1477 47082ce62cdf2aefd2b2fa7de67115e1 186 Pfam PF05685 Putative restriction endonuclease 26 174 9.4E-28 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1477 47082ce62cdf2aefd2b2fa7de67115e1 186 SUPERFAMILY SSF52980 4 160 1.18E-18 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3126 226d1e0085b3c110c1d2399ad63403cb 118 Gene3D G3DSA:3.10.20.30 1 118 3.6E-30 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_3126 226d1e0085b3c110c1d2399ad63403cb 118 SUPERFAMILY SSF54292 4 117 1.33E-14 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 THII_3126 226d1e0085b3c110c1d2399ad63403cb 118 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 106 3.6E-12 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 THII_3126 226d1e0085b3c110c1d2399ad63403cb 118 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 THII_1687 c004089a53b7183078aad3dfa74d55f5 287 Pfam PF09851 Short C-terminal domain 259 284 3.1E-9 T 15-10-2018 IPR018649 SHOCT domain THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Pfam PF00072 Response regulator receiver domain 1128 1239 2.3E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SUPERFAMILY SSF47226 463 583 4.45E-26 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Pfam PF01584 CheW-like domain 973 1101 1.7E-23 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SMART SM00260 961 1102 5.6E-29 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Gene3D G3DSA:3.30.565.10 782 968 2.5E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SMART SM00073 462 559 1.8E-16 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SMART SM00073 16 113 6.8E-10 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SMART SM00073 316 412 1.8E-4 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SUPERFAMILY SSF55874 786 967 2.74E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Gene3D G3DSA:2.40.50.180 992 1057 2.3E-33 T 15-10-2018 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SMART SM00387 828 969 1.2E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Gene3D G3DSA:2.30.30.40 969 1098 2.3E-33 T 15-10-2018 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SMART SM00448 1126 1239 1.1E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SUPERFAMILY SSF50341 968 1101 4.05E-25 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SUPERFAMILY SSF47226 316 414 5.23E-16 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SMART SM01231 645 783 1.3E-8 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Gene3D G3DSA:3.40.50.12740 1126 1250 9.4E-41 T 15-10-2018 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Gene3D G3DSA:1.20.120.160 318 441 4.0E-13 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Gene3D G3DSA:1.20.120.160 16 136 1.8E-22 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SUPERFAMILY SSF52172 1127 1244 4.84E-37 T 15-10-2018 IPR011006 CheY-like superfamily THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 PRINTS PR00344 Bacterial sensor protein C-terminal signature 953 966 3.1E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 PRINTS PR00344 Bacterial sensor protein C-terminal signature 873 887 3.1E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 947 3.1E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Pfam PF01627 Hpt domain 465 564 9.4E-15 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Pfam PF01627 Hpt domain 319 405 6.1E-8 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Pfam PF01627 Hpt domain 18 111 3.0E-11 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 832 968 2.4E-11 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 Gene3D G3DSA:1.20.120.160 455 590 6.0E-27 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_1283 3b16df2065db03b88a6a2c1da5222743 1251 SUPERFAMILY SSF47226 16 129 3.79E-25 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 PRINTS PR00097 Anthranilate synthase component II signature 261 272 1.9E-6 T 15-10-2018 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 PRINTS PR00097 Anthranilate synthase component II signature 346 359 1.9E-6 T 15-10-2018 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 PRINTS PR00097 Anthranilate synthase component II signature 233 242 1.9E-6 T 15-10-2018 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 SUPERFAMILY SSF52021 4 139 6.28E-54 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 Gene3D G3DSA:3.50.30.20 2 151 7.9E-56 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 5.4E-50 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 191 205 2.2E-39 T 15-10-2018 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 230 244 2.2E-39 T 15-10-2018 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 303 314 2.2E-39 T 15-10-2018 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 278 295 2.2E-39 T 15-10-2018 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 261 277 2.2E-39 T 15-10-2018 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 372 1.5E-140 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 374 45.688 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 Gene3D G3DSA:3.40.50.880 152 373 3.8E-72 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_0709 919b9050c44201a9136bb39b88e4dfec 374 SUPERFAMILY SSF52317 185 372 1.32E-57 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_0709 919b9050c44201a9136bb39b88e4dfec 374 SMART SM01097 3 133 2.7E-81 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 233 242 1.7E-11 T 15-10-2018 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 346 359 1.7E-11 T 15-10-2018 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 261 272 1.7E-11 T 15-10-2018 THII_0709 919b9050c44201a9136bb39b88e4dfec 374 Pfam PF00117 Glutamine amidotransferase class-I 194 369 2.1E-46 T 15-10-2018 IPR017926 Glutamine amidotransferase THII_0519 cbdf3435315ebd7a951d6e274ba4c141 218 SUPERFAMILY SSF143243 10 203 2.62E-56 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0519 cbdf3435315ebd7a951d6e274ba4c141 218 Gene3D G3DSA:3.30.460.80 1 160 6.9E-41 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0519 cbdf3435315ebd7a951d6e274ba4c141 218 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 34 181 5.4E-42 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0519 cbdf3435315ebd7a951d6e274ba4c141 218 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 1 188 33.313 T 15-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0519 cbdf3435315ebd7a951d6e274ba4c141 218 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 141 162 - T 15-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0519 cbdf3435315ebd7a951d6e274ba4c141 218 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 93 179 2.3E-37 T 15-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0519 cbdf3435315ebd7a951d6e274ba4c141 218 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 108 168 3.0E-19 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0583 56f96a2bde23fb6fae22a39f13fd583b 2979 SUPERFAMILY SSF49785 48 186 5.53E-5 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily THII_0583 56f96a2bde23fb6fae22a39f13fd583b 2979 Gene3D G3DSA:2.60.40.10 326 436 4.1E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0583 56f96a2bde23fb6fae22a39f13fd583b 2979 Gene3D G3DSA:2.60.40.10 860 965 2.6E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0583 56f96a2bde23fb6fae22a39f13fd583b 2979 SUPERFAMILY SSF51126 1156 1623 5.89E-30 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0271 92639099039cd0f6c23197d88f30da64 831 SUPERFAMILY SSF50692 684 806 4.14E-36 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily THII_0271 92639099039cd0f6c23197d88f30da64 831 Pfam PF01568 Molydopterin dinucleotide binding domain 688 791 1.9E-20 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 THII_0271 92639099039cd0f6c23197d88f30da64 831 Gene3D G3DSA:2.40.40.20 663 810 1.3E-39 T 15-10-2018 THII_0271 92639099039cd0f6c23197d88f30da64 831 Gene3D G3DSA:3.40.228.10 333 406 3.7E-14 T 15-10-2018 THII_0271 92639099039cd0f6c23197d88f30da64 831 Gene3D G3DSA:3.40.50.740 31 332 2.7E-72 T 15-10-2018 THII_0271 92639099039cd0f6c23197d88f30da64 831 SUPERFAMILY SSF53706 43 689 2.62E-140 T 15-10-2018 THII_0271 92639099039cd0f6c23197d88f30da64 831 Pfam PF00384 Molybdopterin oxidoreductase 109 559 7.6E-60 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0271 92639099039cd0f6c23197d88f30da64 831 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 724 751 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 THII_0271 92639099039cd0f6c23197d88f30da64 831 Gene3D G3DSA:3.40.50.740 420 624 1.3E-32 T 15-10-2018 THII_2863 db16543c1199aac1f1a08530e1090a99 137 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 13 125 5.5E-21 T 15-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 THII_2863 db16543c1199aac1f1a08530e1090a99 137 SUPERFAMILY SSF81593 1 125 7.06E-30 T 15-10-2018 THII_2863 db16543c1199aac1f1a08530e1090a99 137 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 7 126 2.2E-26 T 15-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 THII_2863 db16543c1199aac1f1a08530e1090a99 137 Gene3D G3DSA:1.20.120.330 10 127 3.2E-37 T 15-10-2018 THII_1166 7946a53076d21049744b03fc03d0ac0b 445 SUPERFAMILY SSF46626 1 130 5.21E-6 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1166 7946a53076d21049744b03fc03d0ac0b 445 PIRSF PIRSF028099 8 445 2.8E-166 T 15-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase THII_1166 7946a53076d21049744b03fc03d0ac0b 445 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 22 445 4.4E-127 T 15-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase THII_1166 7946a53076d21049744b03fc03d0ac0b 445 Gene3D G3DSA:1.10.760.10 312 445 5.2E-8 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1166 7946a53076d21049744b03fc03d0ac0b 445 SUPERFAMILY SSF46626 311 445 6.4E-21 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 28 182 7.0E-24 T 15-10-2018 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SUPERFAMILY SSF49313 745 832 9.03E-7 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Pfam PF01650 Peptidase C13 family 1016 1140 4.2E-5 T 15-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Gene3D G3DSA:2.60.40.10 744 830 4.9E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Gene3D G3DSA:2.60.40.10 651 743 5.3E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Pfam PF03160 Calx-beta domain 1546 1633 5.6E-16 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Pfam PF03160 Calx-beta domain 1809 1895 8.9E-11 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Pfam PF03160 Calx-beta domain 1683 1778 1.0E-11 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Pfam PF03160 Calx-beta domain 1936 2025 8.8E-14 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Gene3D G3DSA:2.60.40.2030 1688 1802 3.2E-22 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Gene3D G3DSA:2.60.40.2030 1544 1656 6.3E-25 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Gene3D G3DSA:2.60.40.2030 1936 2046 2.8E-23 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SUPERFAMILY SSF141072 1688 1805 7.59E-27 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SUPERFAMILY SSF49313 652 738 1.65E-9 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SMART SM00237 1676 1779 2.0E-19 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SMART SM00237 1919 2025 1.1E-17 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SMART SM00237 1803 1903 9.5E-7 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SMART SM00237 1536 1634 1.7E-13 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SUPERFAMILY SSF141072 1937 2046 5.1E-24 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SUPERFAMILY SSF49899 10 215 1.03E-27 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SUPERFAMILY SSF141072 1815 1934 5.49E-19 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SMART SM00282 39 175 5.8E-5 T 15-10-2018 IPR001791 Laminin G domain THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Gene3D G3DSA:2.60.120.200 23 226 1.2E-31 T 15-10-2018 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Gene3D G3DSA:2.60.40.10 1314 1441 9.9E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SUPERFAMILY SSF49265 1337 1438 4.08E-5 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SUPERFAMILY SSF141072 1543 1658 5.62E-28 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Pfam PF05345 Putative Ig domain 687 726 6.9E-5 T 15-10-2018 IPR008009 Putative Ig THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 SMART SM00560 39 180 0.0033 T 15-10-2018 IPR006558 LamG-like jellyroll fold THII_0756 e6b6efa80d19579f39a64e2530ca6821 2225 Gene3D G3DSA:2.60.40.2030 1814 1926 7.7E-22 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_1031 e9665c3dc34ed0824aba29fa52cbe081 361 SUPERFAMILY SSF53659 1 358 7.04E-122 T 15-10-2018 THII_1031 e9665c3dc34ed0824aba29fa52cbe081 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 354 7.1E-137 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 THII_1031 e9665c3dc34ed0824aba29fa52cbe081 361 Gene3D G3DSA:3.40.718.10 1 358 3.9E-148 T 15-10-2018 THII_1031 e9665c3dc34ed0824aba29fa52cbe081 361 SMART SM01329 4 354 8.0E-204 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 THII_1031 e9665c3dc34ed0824aba29fa52cbe081 361 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 358 51.466 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 THII_1031 e9665c3dc34ed0824aba29fa52cbe081 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 THII_1031 e9665c3dc34ed0824aba29fa52cbe081 361 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 352 2.8E-153 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 THII_2960 8c119bd875da0addee8c388b596dfad7 621 Gene3D G3DSA:3.40.50.1100 280 610 3.1E-187 T 15-10-2018 THII_2960 8c119bd875da0addee8c388b596dfad7 621 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 233 615 1.0E-192 T 15-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_2960 8c119bd875da0addee8c388b596dfad7 621 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 228 617 52.776 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_2960 8c119bd875da0addee8c388b596dfad7 621 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 15 210 1.3E-50 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 THII_2960 8c119bd875da0addee8c388b596dfad7 621 Gene3D G3DSA:3.20.20.70 12 213 9.3E-66 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2960 8c119bd875da0addee8c388b596dfad7 621 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 13 215 40.79 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 THII_2960 8c119bd875da0addee8c388b596dfad7 621 SUPERFAMILY SSF53686 229 614 4.45E-149 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THII_2960 8c119bd875da0addee8c388b596dfad7 621 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 280 604 4.3E-46 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme THII_2960 8c119bd875da0addee8c388b596dfad7 621 SUPERFAMILY SSF51366 13 212 3.77E-62 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 THII_2960 8c119bd875da0addee8c388b596dfad7 621 Gene3D G3DSA:3.40.50.1100 236 432 3.1E-187 T 15-10-2018 THII_2960 8c119bd875da0addee8c388b596dfad7 621 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 307 321 - T 15-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_3315 d92ac0c7661741feeaabdb0da01adef7 574 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 41 66 - T 15-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 THII_3315 d92ac0c7661741feeaabdb0da01adef7 574 Gene3D G3DSA:1.10.645.10 1 559 1.2E-266 T 15-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_3315 d92ac0c7661741feeaabdb0da01adef7 574 SUPERFAMILY SSF56762 1 559 7.06E-177 T 15-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_3315 d92ac0c7661741feeaabdb0da01adef7 574 Pfam PF00374 Nickel-dependent hydrogenase 41 559 4.6E-239 T 15-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 THII_3315 d92ac0c7661741feeaabdb0da01adef7 574 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 550 559 - T 15-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 SUPERFAMILY SSF48452 26 187 2.06E-34 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 Gene3D G3DSA:1.25.40.10 130 211 4.1E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 Gene3D G3DSA:1.25.40.10 96 129 4.0E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 Pfam PF13414 TPR repeat 97 138 1.7E-10 T 15-10-2018 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 SMART SM00028 90 123 0.0029 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 SMART SM00028 124 157 5.7E-8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 SMART SM00028 56 89 1.3E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 SMART SM00028 22 55 24.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 Gene3D G3DSA:1.25.40.10 5 95 2.0E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 Pfam PF13181 Tetratricopeptide repeat 58 87 5.1E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 381 413 1.3E-4 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 SUPERFAMILY SSF53756 209 446 3.45E-24 T 15-10-2018 THII_0953 ffeb786da03fa72ef1a9105218a2e8bf 462 Gene3D G3DSA:3.40.50.2000 334 438 9.7E-7 T 15-10-2018 THII_2532 a420802f518ffad36673d980e6b7cfa7 366 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 15 150 1.3E-40 T 15-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_2532 a420802f518ffad36673d980e6b7cfa7 366 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 13 359 4.7E-108 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_2532 a420802f518ffad36673d980e6b7cfa7 366 Gene3D G3DSA:3.40.50.2000 16 353 1.3E-115 T 15-10-2018 THII_2532 a420802f518ffad36673d980e6b7cfa7 366 SUPERFAMILY SSF53756 14 361 1.36E-115 T 15-10-2018 THII_2532 a420802f518ffad36673d980e6b7cfa7 366 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 15 363 35.894 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_2532 a420802f518ffad36673d980e6b7cfa7 366 Gene3D G3DSA:3.40.50.2000 172 347 1.3E-115 T 15-10-2018 THII_2532 a420802f518ffad36673d980e6b7cfa7 366 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 193 344 2.3E-39 T 15-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 THII_0241 746442d49d029ad66566b21afffb2b5c 319 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 7 299 8.4E-49 T 15-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal THII_0241 746442d49d029ad66566b21afffb2b5c 319 SUPERFAMILY SSF55729 113 250 3.44E-7 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_1883 63ba8e27c485ab8bf0279aa4ce0f2f24 366 SUPERFAMILY SSF102114 53 322 1.75E-39 T 15-10-2018 THII_1883 63ba8e27c485ab8bf0279aa4ce0f2f24 366 Pfam PF04055 Radical SAM superfamily 87 235 1.0E-13 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_1883 63ba8e27c485ab8bf0279aa4ce0f2f24 366 PIRSF PIRSF004869 3 320 5.0E-90 T 15-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted THII_1883 63ba8e27c485ab8bf0279aa4ce0f2f24 366 Gene3D G3DSA:3.20.20.70 74 293 1.9E-33 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_1883 63ba8e27c485ab8bf0279aa4ce0f2f24 366 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 12 360 3.2E-200 T 15-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme THII_1397 bcb039289adc0306c2626d0da4c9a1f7 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 15-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_1397 bcb039289adc0306c2626d0da4c9a1f7 143 SUPERFAMILY SSF54919 1 141 3.14E-58 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 THII_1397 bcb039289adc0306c2626d0da4c9a1f7 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.46 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 THII_1397 bcb039289adc0306c2626d0da4c9a1f7 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.6E-55 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 THII_1397 bcb039289adc0306c2626d0da4c9a1f7 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.8E-38 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 THII_1397 bcb039289adc0306c2626d0da4c9a1f7 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.8E-38 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 THII_1397 bcb039289adc0306c2626d0da4c9a1f7 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.8E-38 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 THII_1397 bcb039289adc0306c2626d0da4c9a1f7 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.8E-38 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 THII_1397 bcb039289adc0306c2626d0da4c9a1f7 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.8E-38 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 THII_1397 bcb039289adc0306c2626d0da4c9a1f7 143 Gene3D G3DSA:3.30.70.141 1 141 4.6E-57 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 THII_1397 bcb039289adc0306c2626d0da4c9a1f7 143 SMART SM00562 3 140 2.5E-87 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 THII_3938 57d2f08de9ff8878adf70fac6a2a0042 209 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 190 2.4E-67 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 THII_3938 57d2f08de9ff8878adf70fac6a2a0042 209 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 187 29.971 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 THII_3938 57d2f08de9ff8878adf70fac6a2a0042 209 Pfam PF00551 Formyl transferase 7 181 2.2E-53 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_3938 57d2f08de9ff8878adf70fac6a2a0042 209 Gene3D G3DSA:3.40.50.170 1 206 1.2E-75 T 15-10-2018 THII_3938 57d2f08de9ff8878adf70fac6a2a0042 209 SUPERFAMILY SSF53328 6 194 2.88E-59 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_3938 57d2f08de9ff8878adf70fac6a2a0042 209 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 15-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_1651 e21b6587553eb79ce66ca812042ba8cc 585 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 92 115 2.4E-5 T 15-10-2018 THII_1651 e21b6587553eb79ce66ca812042ba8cc 585 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 151 173 6.9E-5 T 15-10-2018 THII_1651 e21b6587553eb79ce66ca812042ba8cc 585 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 55 82 1.7E-6 T 15-10-2018 THII_1651 e21b6587553eb79ce66ca812042ba8cc 585 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 302 326 5.1E-6 T 15-10-2018 THII_1651 e21b6587553eb79ce66ca812042ba8cc 585 SUPERFAMILY SSF50985 22 327 2.09E-33 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_1651 e21b6587553eb79ce66ca812042ba8cc 585 Gene3D G3DSA:2.130.10.30 135 338 3.7E-21 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_1651 e21b6587553eb79ce66ca812042ba8cc 585 Gene3D G3DSA:2.130.10.30 10 134 3.8E-24 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_1651 e21b6587553eb79ce66ca812042ba8cc 585 SUPERFAMILY SSF101898 377 571 2.07E-8 T 15-10-2018 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 Gene3D G3DSA:1.10.238.10 21 119 3.2E-15 T 15-10-2018 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 ProSitePatterns PS00018 EF-hand calcium-binding domain. 44 56 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 Pfam PF13202 EF hand 158 174 0.0028 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 Pfam PF13202 EF hand 127 145 0.023 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 Pfam PF13202 EF hand 38 57 0.016 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 Pfam PF13202 EF hand 96 114 2.5E-5 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 Pfam PF13202 EF hand 64 82 0.01 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 ProSitePatterns PS00018 EF-hand calcium-binding domain. 162 174 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 ProSitePatterns PS00018 EF-hand calcium-binding domain. 100 112 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 SUPERFAMILY SSF47473 62 179 4.99E-20 T 15-10-2018 IPR011992 EF-hand domain pair THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 Gene3D G3DSA:1.10.238.10 121 181 8.4E-11 T 15-10-2018 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 SMART SM00054 153 181 37.0 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 SMART SM00054 35 63 0.83 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 SMART SM00054 123 151 8.6 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 SMART SM00054 64 87 52.0 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1627 448b2ecb4bdcc0a7aa77d6346bb717e3 200 SMART SM00054 91 119 45.0 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 162 5.9E-46 T 15-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 323 2.1E-53 T 15-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 PIRSF PIRSF000114 4 335 6.3E-103 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 Gene3D G3DSA:3.40.50.720 3 190 1.1E-56 T 15-10-2018 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 SUPERFAMILY SSF51735 8 181 6.75E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 325 36.86 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 2.1E-44 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 2.1E-44 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 2.1E-44 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 2.1E-44 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 2.1E-44 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 2.1E-44 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 Gene3D G3DSA:1.10.1040.10 192 336 3.1E-53 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 THII_2596 342aa57a4681dd88dfbf203b28be23d8 336 SUPERFAMILY SSF48179 182 334 6.29E-56 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 THII_3812 62e419db2d112834ca6b29b36acadeb8 145 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 31 122 5.6E-6 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_3812 62e419db2d112834ca6b29b36acadeb8 145 Gene3D G3DSA:1.10.760.10 1 128 4.8E-9 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_3812 62e419db2d112834ca6b29b36acadeb8 145 SUPERFAMILY SSF46626 1 127 1.72E-16 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1965 caa8ee246e290e312fa3e516f7b88a57 65 Pfam PF10047 Protein of unknown function (DUF2281) 9 43 3.3E-6 T 15-10-2018 IPR018739 Domain of unknown function DUF2281 THII_1490 476069913a74ac7f68da6209cb5617b6 542 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 4.9E-256 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 THII_1490 476069913a74ac7f68da6209cb5617b6 542 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 THII_1490 476069913a74ac7f68da6209cb5617b6 542 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 THII_1490 476069913a74ac7f68da6209cb5617b6 542 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 THII_1490 476069913a74ac7f68da6209cb5617b6 542 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 THII_1490 476069913a74ac7f68da6209cb5617b6 542 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 THII_1490 476069913a74ac7f68da6209cb5617b6 542 Gene3D G3DSA:3.30.260.10 136 410 1.9E-238 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily THII_1490 476069913a74ac7f68da6209cb5617b6 542 SUPERFAMILY SSF54849 137 204 5.26E-24 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily THII_1490 476069913a74ac7f68da6209cb5617b6 542 Gene3D G3DSA:3.50.7.10 192 372 1.9E-238 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily THII_1490 476069913a74ac7f68da6209cb5617b6 542 SUPERFAMILY SSF48592 7 521 1.42E-77 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily THII_1490 476069913a74ac7f68da6209cb5617b6 542 SUPERFAMILY SSF52029 184 376 5.76E-83 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily THII_1490 476069913a74ac7f68da6209cb5617b6 542 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 1.4E-94 T 15-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 THII_1490 476069913a74ac7f68da6209cb5617b6 542 Gene3D G3DSA:1.10.560.10 8 521 1.9E-238 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily THII_1490 476069913a74ac7f68da6209cb5617b6 542 Hamap MF_00600 60 kDa chaperonin [groL]. 2 539 41.042 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 THII_1490 476069913a74ac7f68da6209cb5617b6 542 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 15-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 THII_3873 933b7aef91a95fea8f7ec56c8d43fc7e 529 Gene3D G3DSA:1.10.10.350 426 519 8.7E-19 T 15-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 THII_3873 933b7aef91a95fea8f7ec56c8d43fc7e 529 SUPERFAMILY SSF48163 330 519 4.19E-20 T 15-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 THII_3873 933b7aef91a95fea8f7ec56c8d43fc7e 529 Pfam PF01921 tRNA synthetases class I (K) 5 342 3.6E-103 T 15-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 THII_3873 933b7aef91a95fea8f7ec56c8d43fc7e 529 Gene3D G3DSA:2.30.30.300 173 226 8.1E-74 T 15-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 THII_3873 933b7aef91a95fea8f7ec56c8d43fc7e 529 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 27 517 1.9E-53 T 15-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 THII_3873 933b7aef91a95fea8f7ec56c8d43fc7e 529 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 4 520 26.055 T 15-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 THII_3873 933b7aef91a95fea8f7ec56c8d43fc7e 529 Gene3D G3DSA:3.40.50.620 20 279 8.1E-74 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3873 933b7aef91a95fea8f7ec56c8d43fc7e 529 SUPERFAMILY SSF52374 6 320 1.63E-46 T 15-10-2018 THII_3873 933b7aef91a95fea8f7ec56c8d43fc7e 529 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 33 42 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Gene3D G3DSA:1.10.132.30 642 791 8.0E-66 T 15-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Gene3D G3DSA:2.40.50.100 1028 1131 7.9E-30 T 15-10-2018 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 767 1319 3.6E-74 T 15-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 SMART SM00663 235 514 1.4E-181 T 15-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Gene3D G3DSA:1.10.150.390 1320 1384 2.2E-26 T 15-10-2018 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Gene3D G3DSA:2.40.50.100 949 1027 2.8E-22 T 15-10-2018 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Gene3D G3DSA:1.10.1790.20 1140 1318 3.3E-65 T 15-10-2018 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Gene3D G3DSA:2.40.50.100 1156 1219 3.3E-65 T 15-10-2018 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 645 1.6E-30 T 15-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.4E-88 T 15-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 14 1381 19.077 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 394 485 6.6E-27 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 6.6E-8 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Gene3D G3DSA:1.10.40.90 374 416 3.8E-22 T 15-10-2018 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1371 0.0 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Gene3D G3DSA:1.10.274.100 490 641 2.0E-42 T 15-10-2018 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 760 3.3E-19 T 15-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2732 0b208c7a2e56a8a14961a5ac67bd94f4 1400 SUPERFAMILY SSF64484 16 1368 0.0 T 15-10-2018 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Pfam PF08447 PAS fold 238 318 8.2E-11 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SUPERFAMILY SSF52172 1116 1241 1.99E-35 T 15-10-2018 IPR011006 CheY-like superfamily THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Gene3D G3DSA:3.30.450.20 208 326 1.2E-20 T 15-10-2018 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00448 1116 1229 5.1E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Pfam PF00989 PAS fold 475 582 8.0E-10 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 471 603 6.5E-18 T 15-10-2018 IPR000014 PAS domain THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 207 336 3.6E-6 T 15-10-2018 IPR000014 PAS domain THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 733 852 4.2E-20 T 15-10-2018 IPR000014 PAS domain THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 605 725 1.1E-6 T 15-10-2018 IPR000014 PAS domain THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00086 804 845 0.1 T 15-10-2018 IPR001610 PAC motif THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00086 424 463 110.0 T 15-10-2018 IPR001610 PAC motif THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00086 554 597 0.13 T 15-10-2018 IPR001610 PAC motif THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00086 288 329 0.37 T 15-10-2018 IPR001610 PAC motif THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Pfam PF00072 Response regulator receiver domain 1118 1229 4.2E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SUPERFAMILY SSF55785 460 595 1.01E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Gene3D G3DSA:3.30.450.20 471 604 2.9E-19 T 15-10-2018 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SUPERFAMILY SSF55785 326 461 1.74E-10 T 15-10-2018 IPR035965 PAS domain superfamily THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 979 1087 1.9E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Pfam PF00512 His Kinase A (phospho-acceptor) domain 865 931 4.8E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SUPERFAMILY SSF55874 920 1086 1.09E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SUPERFAMILY SSF55785 716 843 2.58E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00388 865 931 1.6E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SUPERFAMILY SSF47384 851 932 1.71E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Pfam PF13426 PAS domain 743 843 6.9E-11 T 15-10-2018 IPR000014 PAS domain THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00091 341 411 71.0 T 15-10-2018 IPR000014 PAS domain THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00091 210 282 8.4 T 15-10-2018 IPR000014 PAS domain THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00091 730 797 7.0E-8 T 15-10-2018 IPR000014 PAS domain THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00091 605 672 10.0 T 15-10-2018 IPR000014 PAS domain THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00091 475 545 5.4E-8 T 15-10-2018 IPR000014 PAS domain THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Gene3D G3DSA:1.10.287.130 845 929 2.3E-28 T 15-10-2018 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Gene3D G3DSA:3.40.50.12740 1116 1306 1.1E-41 T 15-10-2018 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SUPERFAMILY SSF55785 593 712 4.01E-12 T 15-10-2018 IPR035965 PAS domain superfamily THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Gene3D G3DSA:3.30.565.10 930 1091 1.5E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Gene3D G3DSA:3.30.450.20 606 731 7.2E-16 T 15-10-2018 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SUPERFAMILY SSF55785 195 327 2.26E-15 T 15-10-2018 IPR035965 PAS domain superfamily THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1072 1085 4.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1014 1028 4.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1032 1042 4.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1048 1066 4.9E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Pfam PF08448 PAS fold 348 464 8.2E-6 T 15-10-2018 IPR013656 PAS fold-4 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Pfam PF08448 PAS fold 614 719 8.8E-8 T 15-10-2018 IPR013656 PAS fold-4 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 SMART SM00387 978 1088 5.5E-38 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Gene3D G3DSA:3.30.450.20 732 844 6.8E-28 T 15-10-2018 THII_1540 e0d21f8fce8803ef72f04a99f2529c77 1313 Gene3D G3DSA:3.30.450.20 328 470 7.3E-14 T 15-10-2018 THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 Pfam PF13360 PQQ-like domain 75 307 1.2E-57 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 SUPERFAMILY SSF50998 27 368 4.71E-82 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 Gene3D G3DSA:2.130.10.10 17 379 7.4E-101 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 SMART SM00564 276 308 2.5 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 SMART SM00564 141 173 13.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 SMART SM00564 101 133 0.041 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 SMART SM00564 61 93 28.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 SMART SM00564 188 219 0.0015 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 SMART SM00564 318 349 19.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 SMART SM00564 239 270 0.064 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 5 380 36.56 T 15-10-2018 IPR017687 Outer membrane protein assembly factor BamB THII_3366 cb766bd3b5f7ab0fb176ea805f06a2d1 381 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 5 378 9.0E-134 T 15-10-2018 IPR017687 Outer membrane protein assembly factor BamB THII_2180 b97a94fae8b77e9f290ae7264386c483 116 Gene3D G3DSA:2.40.10.220 5 116 5.8E-41 T 15-10-2018 THII_2180 b97a94fae8b77e9f290ae7264386c483 116 Pfam PF07238 PilZ domain 13 103 4.1E-8 T 15-10-2018 IPR009875 PilZ domain GO:0035438 THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 Pfam PF00990 Diguanylate cyclase, GGDEF domain 264 422 5.6E-29 T 15-10-2018 IPR000160 GGDEF domain THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 Pfam PF08448 PAS fold 140 253 5.3E-10 T 15-10-2018 IPR013656 PAS fold-4 THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 SUPERFAMILY SSF52172 1 135 4.55E-31 T 15-10-2018 IPR011006 CheY-like superfamily THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 SUPERFAMILY SSF55785 121 249 2.28E-9 T 15-10-2018 IPR035965 PAS domain superfamily THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 SMART SM00091 133 199 0.0043 T 15-10-2018 IPR000014 PAS domain THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 Pfam PF00072 Response regulator receiver domain 3 114 1.2E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 SUPERFAMILY SSF55073 269 427 5.1E-33 T 15-10-2018 IPR029787 Nucleotide cyclase THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 Gene3D G3DSA:3.30.70.270 256 428 1.7E-37 T 15-10-2018 THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 SMART SM00448 1 115 2.1E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 Gene3D G3DSA:3.30.450.20 122 255 4.0E-10 T 15-10-2018 THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 424 7.6E-31 T 15-10-2018 IPR000160 GGDEF domain THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 Gene3D G3DSA:3.40.50.2300 1 121 1.5E-26 T 15-10-2018 THII_0061 0b6e2eb24981d733e54fbadc7cc1b570 430 SMART SM00267 252 426 3.4E-30 T 15-10-2018 IPR000160 GGDEF domain THII_1501 439e347bbdf32987d87d3bd198763989 1684 Gene3D G3DSA:3.80.10.10 40 168 2.5E-27 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1501 439e347bbdf32987d87d3bd198763989 1684 SUPERFAMILY SSF52058 40 149 2.72E-14 T 15-10-2018 THII_1501 439e347bbdf32987d87d3bd198763989 1684 Pfam PF08263 Leucine rich repeat N-terminal domain 40 78 1.7E-5 T 15-10-2018 IPR013210 Leucine-rich repeat-containing N-terminal, plant-type THII_1501 439e347bbdf32987d87d3bd198763989 1684 Gene3D G3DSA:2.60.40.10 658 762 1.7E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1501 439e347bbdf32987d87d3bd198763989 1684 Gene3D G3DSA:2.60.40.10 437 539 1.0E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3352 784f1ba4413d04b06aec302dc715489b 245 SUPERFAMILY SSF69304 61 236 7.59E-6 T 15-10-2018 THII_1246 5bfa0d16756185354e8c35bd164a40d4 673 Gene3D G3DSA:3.40.50.10320 439 657 9.1E-41 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 THII_1246 5bfa0d16756185354e8c35bd164a40d4 673 Pfam PF00534 Glycosyl transferases group 1 217 374 1.1E-27 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_1246 5bfa0d16756185354e8c35bd164a40d4 673 SUPERFAMILY SSF53756 2 394 2.39E-51 T 15-10-2018 THII_1246 5bfa0d16756185354e8c35bd164a40d4 673 Pfam PF02585 GlcNAc-PI de-N-acetylase 449 565 2.0E-22 T 15-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 THII_1246 5bfa0d16756185354e8c35bd164a40d4 673 Gene3D G3DSA:3.40.50.2000 210 378 7.8E-36 T 15-10-2018 THII_1246 5bfa0d16756185354e8c35bd164a40d4 673 SUPERFAMILY SSF102588 447 613 1.96E-38 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 THII_1246 5bfa0d16756185354e8c35bd164a40d4 673 Gene3D G3DSA:3.40.50.2000 1 198 2.3E-7 T 15-10-2018 THII_1414 426d1a09cd2794f373c311a9acb753fd 944 Gene3D G3DSA:3.40.50.1460 722 943 2.1E-37 T 15-10-2018 THII_1414 426d1a09cd2794f373c311a9acb753fd 944 SUPERFAMILY SSF52129 585 941 1.26E-57 T 15-10-2018 IPR029030 Caspase-like domain superfamily THII_1414 426d1a09cd2794f373c311a9acb753fd 944 Gene3D G3DSA:2.60.40.3800 16 215 1.9E-37 T 15-10-2018 IPR038490 Gingipain propeptide superfamily THII_1414 426d1a09cd2794f373c311a9acb753fd 944 Pfam PF08126 Propeptide_C25 30 185 5.3E-22 T 15-10-2018 IPR012600 Gingipain propeptide GO:0004197 THII_1414 426d1a09cd2794f373c311a9acb753fd 944 Gene3D G3DSA:3.40.50.10390 582 720 1.1E-15 T 15-10-2018 IPR029031 Gingipain, N-terminal superfamily THII_1414 426d1a09cd2794f373c311a9acb753fd 944 Pfam PF01364 Peptidase family C25 592 941 2.0E-79 T 15-10-2018 IPR001769 Gingipain GO:0006508|GO:0008234 THII_0764 9893711f327e8ba3315d28b13ae9fcde 233 PIRSF PIRSF006293 6 232 3.9E-77 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 THII_0764 9893711f327e8ba3315d28b13ae9fcde 233 SUPERFAMILY SSF52402 8 230 4.19E-63 T 15-10-2018 THII_0764 9893711f327e8ba3315d28b13ae9fcde 233 Gene3D G3DSA:3.40.50.620 7 226 1.7E-73 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0764 9893711f327e8ba3315d28b13ae9fcde 233 Pfam PF06508 Queuosine biosynthesis protein QueC 9 218 5.7E-77 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 THII_0764 9893711f327e8ba3315d28b13ae9fcde 233 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 8 226 53.525 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 THII_0764 9893711f327e8ba3315d28b13ae9fcde 233 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 10 213 1.1E-60 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 THII_1261 e23f9dae0bc40a7f109cbd42410918c0 106 Pfam PF13358 DDE superfamily endonuclease 10 92 4.2E-17 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_1261 e23f9dae0bc40a7f109cbd42410918c0 106 Gene3D G3DSA:3.30.420.470 1 105 1.6E-10 T 15-10-2018 THII_1361 e23f9dae0bc40a7f109cbd42410918c0 106 Pfam PF13358 DDE superfamily endonuclease 10 92 4.2E-17 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_1361 e23f9dae0bc40a7f109cbd42410918c0 106 Gene3D G3DSA:3.30.420.470 1 105 1.6E-10 T 15-10-2018 THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 SMART SM00369 178 201 20.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 SMART SM00369 131 153 330.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 SMART SM00369 85 108 64.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 SMART SM00369 154 177 52.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 SUPERFAMILY SSF52058 40 205 8.08E-32 T 15-10-2018 THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 Gene3D G3DSA:3.80.10.10 130 214 2.1E-16 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 Gene3D G3DSA:3.80.10.10 21 129 3.9E-22 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 SMART SM00365 85 107 96.0 T 15-10-2018 THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 SMART SM00365 131 153 100.0 T 15-10-2018 THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 SMART SM00365 154 180 110.0 T 15-10-2018 THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 SMART SM00365 108 130 260.0 T 15-10-2018 THII_3506 abae98c3055f7a3e09fac9c590ff0c7f 1322 Pfam PF08263 Leucine rich repeat N-terminal domain 21 61 3.1E-6 T 15-10-2018 IPR013210 Leucine-rich repeat-containing N-terminal, plant-type THII_0058 4e8de21b300d19cbcde4d43860f882d7 273 PIRSF PIRSF000193 4 269 3.9E-72 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 THII_0058 4e8de21b300d19cbcde4d43860f882d7 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 266 25.705 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 THII_0058 4e8de21b300d19cbcde4d43860f882d7 273 Gene3D G3DSA:3.40.50.720 3 163 1.1E-45 T 15-10-2018 THII_0058 4e8de21b300d19cbcde4d43860f882d7 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 7 98 2.9E-14 T 15-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal THII_0058 4e8de21b300d19cbcde4d43860f882d7 273 SUPERFAMILY SSF48179 161 269 1.87E-33 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 THII_0058 4e8de21b300d19cbcde4d43860f882d7 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 7 266 1.9E-77 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 THII_0058 4e8de21b300d19cbcde4d43860f882d7 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 264 3.4E-34 T 15-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 THII_0058 4e8de21b300d19cbcde4d43860f882d7 273 SUPERFAMILY SSF51735 7 159 4.1E-31 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0058 4e8de21b300d19cbcde4d43860f882d7 273 Gene3D G3DSA:1.10.3730.10 164 271 4.1E-39 T 15-10-2018 THII_0058 4e8de21b300d19cbcde4d43860f882d7 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 THII_2814 3663fef4df662487f1646741afd3d6e3 148 Pfam PF04355 SmpA / OmlA family 52 120 3.0E-19 T 15-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 THII_2814 3663fef4df662487f1646741afd3d6e3 148 Gene3D G3DSA:3.30.1450.10 51 136 2.0E-23 T 15-10-2018 IPR037873 BamE-like THII_2814 3663fef4df662487f1646741afd3d6e3 148 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 28 127 25.103 T 15-10-2018 IPR026592 Outer membrane protein assembly factor BamE THII_3652 e4b97f738e184b32378cdb49795ef178 520 Gene3D G3DSA:3.40.50.1460 284 518 7.2E-66 T 15-10-2018 THII_3652 e4b97f738e184b32378cdb49795ef178 520 SUPERFAMILY SSF52129 286 519 1.3E-50 T 15-10-2018 IPR029030 Caspase-like domain superfamily THII_3652 e4b97f738e184b32378cdb49795ef178 520 Pfam PF00656 Caspase domain 297 518 1.2E-33 T 15-10-2018 THII_1262 de3fbbfceed427e3dd274ddd046fddc0 88 Pfam PF01710 Transposase 1 84 2.2E-6 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_2617 de3fbbfceed427e3dd274ddd046fddc0 88 Pfam PF01710 Transposase 1 84 2.2E-6 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_2233 de3fbbfceed427e3dd274ddd046fddc0 88 Pfam PF01710 Transposase 1 84 2.2E-6 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_1605 3c702355a0b6b6350932c04bf59e7f08 725 SUPERFAMILY SSF90123 162 474 3.01E-49 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 THII_1605 3c702355a0b6b6350932c04bf59e7f08 725 Gene3D G3DSA:3.40.50.300 480 724 3.2E-77 T 15-10-2018 THII_1605 3c702355a0b6b6350932c04bf59e7f08 725 Pfam PF00664 ABC transporter transmembrane region 177 435 1.6E-19 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 THII_1605 3c702355a0b6b6350932c04bf59e7f08 725 Pfam PF03412 Peptidase C39 family 24 144 1.5E-7 T 15-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 THII_1605 3c702355a0b6b6350932c04bf59e7f08 725 SUPERFAMILY SSF52540 479 713 2.13E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1605 3c702355a0b6b6350932c04bf59e7f08 725 Gene3D G3DSA:3.90.70.10 19 146 9.4E-39 T 15-10-2018 THII_1605 3c702355a0b6b6350932c04bf59e7f08 725 Gene3D G3DSA:1.20.1560.10 162 473 8.0E-52 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 THII_1605 3c702355a0b6b6350932c04bf59e7f08 725 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 22 718 5.3E-292 T 15-10-2018 IPR017750 ATPase, type I secretion system THII_1605 3c702355a0b6b6350932c04bf59e7f08 725 Pfam PF00005 ABC transporter 506 655 1.2E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_1605 3c702355a0b6b6350932c04bf59e7f08 725 SMART SM00382 515 701 4.3E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2116 022d59611018a10efb07d52d9d14dd1c 164 Pfam PF05685 Putative restriction endonuclease 19 147 4.0E-17 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2116 022d59611018a10efb07d52d9d14dd1c 164 Gene3D G3DSA:3.90.1570.10 2 164 5.9E-23 T 15-10-2018 THII_2116 022d59611018a10efb07d52d9d14dd1c 164 SUPERFAMILY SSF52980 26 163 2.79E-18 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1898 23ab1fd59f0e0c4be65c6cb1c405c89c 394 Pfam PF00005 ABC transporter 45 191 2.1E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_1898 23ab1fd59f0e0c4be65c6cb1c405c89c 394 SUPERFAMILY SSF52540 43 268 4.82E-75 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1898 23ab1fd59f0e0c4be65c6cb1c405c89c 394 SMART SM00382 52 249 1.7E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1898 23ab1fd59f0e0c4be65c6cb1c405c89c 394 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 390 3.4E-130 T 15-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 THII_1898 23ab1fd59f0e0c4be65c6cb1c405c89c 394 Gene3D G3DSA:3.10.580.10 279 391 7.9E-12 T 15-10-2018 THII_1898 23ab1fd59f0e0c4be65c6cb1c405c89c 394 Gene3D G3DSA:3.40.50.300 31 268 2.4E-69 T 15-10-2018 THII_1898 23ab1fd59f0e0c4be65c6cb1c405c89c 394 SUPERFAMILY SSF54631 273 389 3.42E-15 T 15-10-2018 THII_1898 23ab1fd59f0e0c4be65c6cb1c405c89c 394 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_1898 23ab1fd59f0e0c4be65c6cb1c405c89c 394 Pfam PF00571 CBS domain 339 389 0.0032 T 15-10-2018 IPR000644 CBS domain THII_1269 c265f38fbaf2ab0a267b509ba6592978 224 Gene3D G3DSA:3.30.420.40 3 218 2.4E-71 T 15-10-2018 THII_1269 c265f38fbaf2ab0a267b509ba6592978 224 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 218 1.1E-59 T 15-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 THII_1269 c265f38fbaf2ab0a267b509ba6592978 224 Gene3D G3DSA:3.30.420.40 94 187 2.4E-71 T 15-10-2018 THII_1269 c265f38fbaf2ab0a267b509ba6592978 224 SUPERFAMILY SSF53067 110 216 4.27E-23 T 15-10-2018 THII_1269 c265f38fbaf2ab0a267b509ba6592978 224 Pfam PF00814 Glycoprotease family 29 152 3.8E-28 T 15-10-2018 IPR000905 Gcp-like domain THII_1269 c265f38fbaf2ab0a267b509ba6592978 224 SUPERFAMILY SSF53067 3 106 2.2E-27 T 15-10-2018 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 SUPERFAMILY SSF64484 12 1391 0.0 T 15-10-2018 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1096 1108 - T 15-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Pfam PF04563 RNA polymerase beta subunit 26 511 2.3E-40 T 15-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Gene3D G3DSA:2.40.50.150 852 976 2.4E-43 T 15-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Pfam PF04560 RNA polymerase Rpb2, domain 7 1315 1389 8.9E-27 T 15-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Gene3D G3DSA:2.40.270.10 810 851 1.2E-7 T 15-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Gene3D G3DSA:2.40.270.10 1068 1291 1.5E-88 T 15-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Gene3D G3DSA:3.90.1100.10 655 725 1.2E-21 T 15-10-2018 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Gene3D G3DSA:3.90.1100.10 18 177 1.8E-56 T 15-10-2018 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Gene3D G3DSA:3.90.1800.10 1301 1354 8.6E-11 T 15-10-2018 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Gene3D G3DSA:2.40.50.100 726 808 2.0E-32 T 15-10-2018 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1388 0.0 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Pfam PF00562 RNA polymerase Rpb2, domain 6 730 1313 5.6E-164 T 15-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Pfam PF04565 RNA polymerase Rpb2, domain 3 525 592 1.0E-30 T 15-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Pfam PF10385 RNA polymerase beta subunit external 1 domain 603 668 2.8E-24 T 15-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Gene3D G3DSA:3.90.1110.10 334 452 1.7E-33 T 15-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Pfam PF04561 RNA polymerase Rpb2, domain 2 370 466 2.1E-14 T 15-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 223 3.6E-8 T 15-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Gene3D G3DSA:3.90.1100.10 453 637 7.5E-70 T 15-10-2018 THII_2731 91a60b9e32866addfe091ec5e07073be 1392 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1391 12.507 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0792 0b10cc49fb57ce7cca6f1a163bdb8d9c 128 Pfam PF01381 Helix-turn-helix 7 61 4.8E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_0792 0b10cc49fb57ce7cca6f1a163bdb8d9c 128 SUPERFAMILY SSF47413 2 66 9.98E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_0792 0b10cc49fb57ce7cca6f1a163bdb8d9c 128 SMART SM00530 6 61 2.5E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_0792 0b10cc49fb57ce7cca6f1a163bdb8d9c 128 ProDom PD740661 HI1458 EAG0009 55 127 0.01 T 15-10-2018 THII_0792 0b10cc49fb57ce7cca6f1a163bdb8d9c 128 Gene3D G3DSA:1.10.260.40 1 127 2.8E-17 T 15-10-2018 THII_1455 fd9413beadf944b64a61ec79fe2b752c 527 Gene3D G3DSA:3.40.50.2300 73 205 1.4E-12 T 15-10-2018 THII_1455 fd9413beadf944b64a61ec79fe2b752c 527 SUPERFAMILY SSF48452 483 523 5.38E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1455 fd9413beadf944b64a61ec79fe2b752c 527 SUPERFAMILY SSF55073 282 466 1.1E-56 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1455 fd9413beadf944b64a61ec79fe2b752c 527 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 287 462 1.5E-33 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_1455 fd9413beadf944b64a61ec79fe2b752c 527 SUPERFAMILY SSF52172 81 216 1.21E-11 T 15-10-2018 IPR011006 CheY-like superfamily THII_1455 fd9413beadf944b64a61ec79fe2b752c 527 Gene3D G3DSA:3.30.70.1230 279 479 7.2E-58 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1455 fd9413beadf944b64a61ec79fe2b752c 527 Pfam PF00072 Response regulator receiver domain 84 192 1.2E-7 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1455 fd9413beadf944b64a61ec79fe2b752c 527 SMART SM00044 223 446 5.6E-15 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_3675 871f03110ddb8358f24c6ec298be7db3 358 Gene3D G3DSA:3.40.50.11750 17 250 5.1E-96 T 15-10-2018 THII_3675 871f03110ddb8358f24c6ec298be7db3 358 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 10 353 3.0E-106 T 15-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 THII_3675 871f03110ddb8358f24c6ec298be7db3 358 Gene3D G3DSA:3.40.50.11740 52 284 5.1E-96 T 15-10-2018 THII_3675 871f03110ddb8358f24c6ec298be7db3 358 PIRSF PIRSF005622 2 357 8.5E-117 T 15-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 THII_3675 871f03110ddb8358f24c6ec298be7db3 358 Pfam PF01924 Hydrogenase formation hypA family 7 354 3.2E-121 T 15-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 THII_3675 871f03110ddb8358f24c6ec298be7db3 358 Gene3D G3DSA:1.10.10.2140 308 357 1.2E-21 T 15-10-2018 THII_2890 c2742aff18e239bdafea47c7560333cf 326 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 63 318 1.9E-71 T 15-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family THII_2890 c2742aff18e239bdafea47c7560333cf 326 SUPERFAMILY SSF54862 131 317 6.03E-13 T 15-10-2018 THII_2890 c2742aff18e239bdafea47c7560333cf 326 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 300 311 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2890 c2742aff18e239bdafea47c7560333cf 326 Gene3D G3DSA:3.30.70.20 260 318 3.3E-5 T 15-10-2018 THII_2890 c2742aff18e239bdafea47c7560333cf 326 Pfam PF12801 4Fe-4S binding domain 120 161 2.3E-10 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2890 c2742aff18e239bdafea47c7560333cf 326 Pfam PF12801 4Fe-4S binding domain 181 193 390.0 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2890 c2742aff18e239bdafea47c7560333cf 326 Pfam PF12801 4Fe-4S binding domain 216 250 0.0032 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2891 f89efa4d103131f44329c0761f6aada1 282 SUPERFAMILY SSF52540 2 216 1.38E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2891 f89efa4d103131f44329c0761f6aada1 282 Pfam PF00005 ABC transporter 17 156 5.6E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2891 f89efa4d103131f44329c0761f6aada1 282 SMART SM00382 26 204 6.0E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2891 f89efa4d103131f44329c0761f6aada1 282 Gene3D G3DSA:3.40.50.300 1 230 1.9E-51 T 15-10-2018 THII_2891 f89efa4d103131f44329c0761f6aada1 282 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_2238 68a06b25d214956f1fe88344ccaf70ea 778 SUPERFAMILY SSF56059 13 284 6.95E-62 T 15-10-2018 THII_2238 68a06b25d214956f1fe88344ccaf70ea 778 Gene3D G3DSA:3.30.1490.20 1 144 2.5E-26 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 THII_2238 68a06b25d214956f1fe88344ccaf70ea 778 SUPERFAMILY SSF52009 670 775 4.84E-28 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 THII_2238 68a06b25d214956f1fe88344ccaf70ea 778 Gene3D G3DSA:3.30.470.20 145 243 2.7E-20 T 15-10-2018 THII_2238 68a06b25d214956f1fe88344ccaf70ea 778 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 208 249 1.2E-7 T 15-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 THII_2238 68a06b25d214956f1fe88344ccaf70ea 778 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 55 193 1.3E-32 T 15-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 THII_2238 68a06b25d214956f1fe88344ccaf70ea 778 Gene3D G3DSA:3.50.30.10 673 777 1.8E-32 T 15-10-2018 THII_2238 68a06b25d214956f1fe88344ccaf70ea 778 Pfam PF00391 PEP-utilising enzyme, mobile domain 701 772 5.0E-22 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 THII_1885 abc17b7246a6c27fc860f138bdce70d0 143 Gene3D G3DSA:3.60.21.10 5 87 1.2E-9 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like THII_1885 abc17b7246a6c27fc860f138bdce70d0 143 SUPERFAMILY SSF56300 14 88 1.86E-12 T 15-10-2018 THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 Pfam PF12796 Ankyrin repeats (3 copies) 35 122 3.5E-13 T 15-10-2018 IPR020683 Ankyrin repeat-containing domain THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 Pfam PF12796 Ankyrin repeats (3 copies) 131 223 2.3E-18 T 15-10-2018 IPR020683 Ankyrin repeat-containing domain THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 Pfam PF12796 Ankyrin repeats (3 copies) 230 313 7.5E-14 T 15-10-2018 IPR020683 Ankyrin repeat-containing domain THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 SUPERFAMILY SSF48403 32 312 4.51E-74 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 SMART SM00248 258 287 6.1E-5 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 SMART SM00248 159 188 0.055 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 SMART SM00248 192 221 2.3E-5 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 SMART SM00248 27 56 210.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 SMART SM00248 225 254 0.039 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 SMART SM00248 60 89 1.7E-5 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 SMART SM00248 93 122 0.75 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 SMART SM00248 126 155 0.22 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 Gene3D G3DSA:1.25.40.20 162 227 1.7E-22 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 Gene3D G3DSA:1.25.40.20 228 329 3.9E-30 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 Gene3D G3DSA:1.25.40.20 20 161 1.5E-37 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 PRINTS PR01415 Ankyrin repeat signature 208 222 4.2E-7 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_1693 4884c9a13f96ad3923d58cb4fa310876 329 PRINTS PR01415 Ankyrin repeat signature 61 76 4.2E-7 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_0670 c4dff1e725e924d408148fbf1dfaf2f6 234 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 9 227 2.8E-89 T 15-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 THII_0670 c4dff1e725e924d408148fbf1dfaf2f6 234 Pfam PF13489 Methyltransferase domain 50 201 1.0E-21 T 15-10-2018 THII_0670 c4dff1e725e924d408148fbf1dfaf2f6 234 SUPERFAMILY SSF53335 13 229 2.66E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0670 c4dff1e725e924d408148fbf1dfaf2f6 234 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 233 37.775 T 15-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 THII_0670 c4dff1e725e924d408148fbf1dfaf2f6 234 Gene3D G3DSA:3.40.50.150 9 233 8.5E-74 T 15-10-2018 THII_0299 18ff7866b95c0aa1239ce61b2b68bbb0 101 Gene3D G3DSA:4.10.830.10 39 101 1.3E-20 T 15-10-2018 THII_0299 18ff7866b95c0aa1239ce61b2b68bbb0 101 SUPERFAMILY SSF57716 2 101 8.55E-34 T 15-10-2018 THII_0299 18ff7866b95c0aa1239ce61b2b68bbb0 101 Pfam PF00253 Ribosomal protein S14p/S29e 49 100 7.0E-24 T 15-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0299 18ff7866b95c0aa1239ce61b2b68bbb0 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.305 T 15-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 14 772 24.334 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 37 772 2.4E-264 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Pfam PF07244 Surface antigen variable number repeat 189 276 6.7E-17 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Pfam PF07244 Surface antigen variable number repeat 106 185 9.8E-11 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Pfam PF07244 Surface antigen variable number repeat 360 434 2.4E-14 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Pfam PF07244 Surface antigen variable number repeat 279 357 2.6E-12 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Gene3D G3DSA:3.10.20.310 105 186 3.6E-17 T 15-10-2018 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Gene3D G3DSA:3.10.20.310 188 277 2.1E-23 T 15-10-2018 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Gene3D G3DSA:3.10.20.310 359 434 1.2E-23 T 15-10-2018 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 PIRSF PIRSF006076 3 772 5.3E-249 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Gene3D G3DSA:2.40.160.50 436 772 8.5E-110 T 15-10-2018 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Pfam PF01103 Surface antigen 461 772 1.1E-73 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Gene3D G3DSA:3.10.20.310 31 104 6.0E-19 T 15-10-2018 THII_1739 41b27c7387324ce77f39c73542cf0e6b 772 Gene3D G3DSA:3.10.20.310 278 358 4.6E-20 T 15-10-2018 THII_3213 10145b689cdf385351a2768b4090c70a 770 Gene3D G3DSA:3.30.420.360 395 747 8.1E-108 T 15-10-2018 THII_3213 10145b689cdf385351a2768b4090c70a 770 Pfam PF07503 HypF finger 164 196 1.9E-14 T 15-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 THII_3213 10145b689cdf385351a2768b4090c70a 770 Pfam PF07503 HypF finger 114 147 2.1E-16 T 15-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 THII_3213 10145b689cdf385351a2768b4090c70a 770 Gene3D G3DSA:3.30.420.350 493 736 8.1E-108 T 15-10-2018 THII_3213 10145b689cdf385351a2768b4090c70a 770 SUPERFAMILY SSF54975 9 96 4.58E-21 T 15-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 THII_3213 10145b689cdf385351a2768b4090c70a 770 Gene3D G3DSA:3.30.110.120 259 381 2.9E-141 T 15-10-2018 THII_3213 10145b689cdf385351a2768b4090c70a 770 PIRSF PIRSF006256 7 760 9.2E-254 T 15-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 THII_3213 10145b689cdf385351a2768b4090c70a 770 SUPERFAMILY SSF55821 181 399 1.5E-43 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THII_3213 10145b689cdf385351a2768b4090c70a 770 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 16 748 8.8E-221 T 15-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 THII_3213 10145b689cdf385351a2768b4090c70a 770 Pfam PF01300 Telomere recombination 215 394 1.0E-47 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 THII_3213 10145b689cdf385351a2768b4090c70a 770 Gene3D G3DSA:3.90.870.50 15 372 2.9E-141 T 15-10-2018 THII_3213 10145b689cdf385351a2768b4090c70a 770 ProSitePatterns PS00150 Acylphosphatase signature 1. 16 26 - T 15-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 THII_3213 10145b689cdf385351a2768b4090c70a 770 Pfam PF00708 Acylphosphatase 13 95 3.7E-16 T 15-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 THII_1235 8c52dbaeebd23fc011251d2e463d707a 407 Gene3D G3DSA:3.20.20.300 51 407 2.2E-108 T 15-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 THII_1235 8c52dbaeebd23fc011251d2e463d707a 407 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 64 399 4.8E-82 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 THII_1235 8c52dbaeebd23fc011251d2e463d707a 407 SUPERFAMILY SSF51445 58 405 6.53E-87 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily THII_1976 01b72c505f4f8c651c1c0afc3c8024e1 193 Pfam PF07700 Haem-NO-binding 2 161 3.8E-35 T 15-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 THII_1976 01b72c505f4f8c651c1c0afc3c8024e1 193 Gene3D G3DSA:3.90.1520.10 1 179 9.6E-45 T 15-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 THII_1976 01b72c505f4f8c651c1c0afc3c8024e1 193 SUPERFAMILY SSF111126 1 167 6.8E-36 T 15-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily THII_3654 4f8227f55d9735b44e295f99753a3622 344 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 251 332 9.0E-11 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain THII_3654 4f8227f55d9735b44e295f99753a3622 344 PIRSF PIRSF037420 1 343 7.4E-56 T 15-10-2018 IPR017200 Coenzyme PQQ synthesis protein E THII_3654 4f8227f55d9735b44e295f99753a3622 344 Pfam PF13394 4Fe-4S single cluster domain 18 110 1.5E-7 T 15-10-2018 THII_3654 4f8227f55d9735b44e295f99753a3622 344 Pfam PF13186 Iron-sulfur cluster-binding domain 251 310 6.8E-7 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain THII_3654 4f8227f55d9735b44e295f99753a3622 344 SUPERFAMILY SSF102114 12 319 6.54E-62 T 15-10-2018 THII_3654 4f8227f55d9735b44e295f99753a3622 344 Gene3D G3DSA:3.20.20.70 9 300 2.3E-49 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3654 4f8227f55d9735b44e295f99753a3622 344 Pfam PF04055 Radical SAM superfamily 17 179 3.9E-18 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_0634 008195a8f18ad216c2fabe652411d76e 1199 SUPERFAMILY SSF52980 913 1198 2.95E-71 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0634 008195a8f18ad216c2fabe652411d76e 1199 Pfam PF00580 UvrD/REP helicase N-terminal domain 16 441 1.7E-63 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 THII_0634 008195a8f18ad216c2fabe652411d76e 1199 Gene3D G3DSA:3.40.50.300 450 853 1.1E-123 T 15-10-2018 THII_0634 008195a8f18ad216c2fabe652411d76e 1199 Pfam PF13361 UvrD-like helicase C-terminal domain 446 639 4.6E-9 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 THII_0634 008195a8f18ad216c2fabe652411d76e 1199 Gene3D G3DSA:3.40.50.300 11 440 1.2E-132 T 15-10-2018 THII_0634 008195a8f18ad216c2fabe652411d76e 1199 Gene3D G3DSA:1.10.3170.10 150 354 1.2E-132 T 15-10-2018 THII_0634 008195a8f18ad216c2fabe652411d76e 1199 Gene3D G3DSA:3.90.320.10 902 1199 2.9E-87 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal THII_0634 008195a8f18ad216c2fabe652411d76e 1199 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 9 1198 21.756 T 15-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 THII_0634 008195a8f18ad216c2fabe652411d76e 1199 Gene3D G3DSA:1.10.486.10 596 741 1.1E-123 T 15-10-2018 THII_0634 008195a8f18ad216c2fabe652411d76e 1199 Pfam PF13361 UvrD-like helicase C-terminal domain 733 835 2.6E-15 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 THII_0634 008195a8f18ad216c2fabe652411d76e 1199 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 11 1195 0.0 T 15-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 THII_0634 008195a8f18ad216c2fabe652411d76e 1199 SUPERFAMILY SSF52540 17 839 3.78E-110 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3700 1ee037f0821973ab34f1e6105e8e55a3 491 PRINTS PR00095 Anthranilate synthase component I signature 337 350 8.9E-25 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 THII_3700 1ee037f0821973ab34f1e6105e8e55a3 491 PRINTS PR00095 Anthranilate synthase component I signature 417 431 8.9E-25 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 THII_3700 1ee037f0821973ab34f1e6105e8e55a3 491 PRINTS PR00095 Anthranilate synthase component I signature 432 446 8.9E-25 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 THII_3700 1ee037f0821973ab34f1e6105e8e55a3 491 PRINTS PR00095 Anthranilate synthase component I signature 323 336 8.9E-25 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 THII_3700 1ee037f0821973ab34f1e6105e8e55a3 491 Pfam PF00425 chorismate binding enzyme 222 475 5.4E-98 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal THII_3700 1ee037f0821973ab34f1e6105e8e55a3 491 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 169 4.7E-36 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 THII_3700 1ee037f0821973ab34f1e6105e8e55a3 491 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 483 1.0E-174 T 15-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 THII_3700 1ee037f0821973ab34f1e6105e8e55a3 491 Gene3D G3DSA:3.60.120.10 2 489 8.1E-182 T 15-10-2018 IPR005801 ADC synthase GO:0009058 THII_3700 1ee037f0821973ab34f1e6105e8e55a3 491 SUPERFAMILY SSF56322 14 483 1.96E-161 T 15-10-2018 IPR005801 ADC synthase GO:0009058 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 SUPERFAMILY SSF81606 1288 1500 6.41E-7 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 SUPERFAMILY SSF55874 909 1083 1.11E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07495 Y_Y_Y domain 733 796 8.9E-17 T 15-10-2018 IPR011123 Two component regulator three Y THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Gene3D G3DSA:3.40.50.2300 1114 1243 2.1E-37 T 15-10-2018 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Gene3D G3DSA:3.30.565.10 921 1078 2.3E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 SMART SM00387 966 1079 3.6E-39 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 SUPERFAMILY SSF63829 273 463 3.6E-14 T 15-10-2018 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1022 1032 8.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1039 1057 8.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1004 1018 8.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1063 1076 8.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 SUPERFAMILY SSF63829 44 273 7.85E-19 T 15-10-2018 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Gene3D G3DSA:2.130.10.10 265 361 1.6E-25 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Gene3D G3DSA:2.130.10.10 362 677 2.6E-102 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Gene3D G3DSA:2.130.10.10 121 264 9.8E-45 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Gene3D G3DSA:1.10.287.130 819 918 2.4E-23 T 15-10-2018 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Gene3D G3DSA:2.60.40.10 678 809 1.7E-49 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 SMART SM00448 1121 1235 2.9E-44 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF00072 Response regulator receiver domain 1123 1236 1.1E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Gene3D G3DSA:2.130.10.10 25 120 6.1E-39 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 128 151 6.4E-7 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 176 199 3.1E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 81 104 4.4E-5 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 226 245 9.9E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 509 531 0.0056 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 36 58 8.6E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 270 293 0.0025 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 556 579 7.9E-5 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 414 437 2.8E-5 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 462 484 0.0039 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 318 341 0.016 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 367 389 0.0013 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07494 Two component regulator propeller 600 622 0.017 T 15-10-2018 IPR011110 Two component regulator propeller THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Gene3D G3DSA:3.60.40.10 1244 1502 2.6E-54 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF00512 His Kinase A (phospho-acceptor) domain 853 918 6.3E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 SUPERFAMILY SSF52172 1114 1255 1.71E-42 T 15-10-2018 IPR011006 CheY-like superfamily THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 SMART SM00388 852 920 2.2E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 SMART SM00331 1275 1501 4.6E-51 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 SUPERFAMILY SSF47384 841 920 3.34E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 967 1077 6.5E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 SUPERFAMILY SSF63829 419 643 1.99E-14 T 15-10-2018 THII_3682 aa774f630d3c3ec89298a740e360c2b7 1502 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 1301 1500 8.5E-37 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_0560 c176939a691c3cf22787f0256c68814c 1002 Gene3D G3DSA:3.30.70.100 885 971 9.4E-6 T 15-10-2018 THII_0560 c176939a691c3cf22787f0256c68814c 1002 Gene3D G3DSA:3.40.50.2300 33 376 3.6E-75 T 15-10-2018 THII_0560 c176939a691c3cf22787f0256c68814c 1002 Pfam PF13458 Periplasmic binding protein 29 388 1.0E-40 T 15-10-2018 IPR028081 Leucine-binding protein domain THII_0560 c176939a691c3cf22787f0256c68814c 1002 Pfam PF00924 Mechanosensitive ion channel 767 966 3.2E-31 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 THII_0560 c176939a691c3cf22787f0256c68814c 1002 Gene3D G3DSA:2.30.30.60 824 874 9.6E-9 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily THII_0560 c176939a691c3cf22787f0256c68814c 1002 SUPERFAMILY SSF53822 27 394 3.53E-62 T 15-10-2018 IPR028082 Periplasmic binding protein-like I THII_0560 c176939a691c3cf22787f0256c68814c 1002 SUPERFAMILY SSF82689 879 978 2.48E-10 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 THII_0560 c176939a691c3cf22787f0256c68814c 1002 SUPERFAMILY SSF50182 810 874 1.21E-13 T 15-10-2018 IPR010920 LSM domain superfamily THII_0560 c176939a691c3cf22787f0256c68814c 1002 Gene3D G3DSA:3.40.50.2300 146 296 3.6E-75 T 15-10-2018 THII_1457 871fe0d3fbd4654e8f0f14949322a4b1 177 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 17 88 9.8E-8 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 THII_1457 871fe0d3fbd4654e8f0f14949322a4b1 177 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 15 169 7.6E-29 T 15-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 THII_1457 871fe0d3fbd4654e8f0f14949322a4b1 177 SUPERFAMILY SSF53254 15 155 3.43E-17 T 15-10-2018 IPR029033 Histidine phosphatase superfamily THII_1457 871fe0d3fbd4654e8f0f14949322a4b1 177 Gene3D G3DSA:3.40.50.1240 16 176 6.3E-32 T 15-10-2018 IPR029033 Histidine phosphatase superfamily THII_3407 3691b52659ff73e2ae424ac2df655522 161 Pfam PF01814 Hemerythrin HHE cation binding domain 41 151 7.5E-11 T 15-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 THII_3407 3691b52659ff73e2ae424ac2df655522 161 ProSitePatterns PS00550 Hemerythrin family signature. 85 108 - T 15-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 THII_3407 3691b52659ff73e2ae424ac2df655522 161 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 33 154 9.6E-27 T 15-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 THII_3407 3691b52659ff73e2ae424ac2df655522 161 Gene3D G3DSA:1.20.120.50 29 161 7.0E-34 T 15-10-2018 IPR035938 Hemerythrin-like superfamily THII_3407 3691b52659ff73e2ae424ac2df655522 161 SUPERFAMILY SSF47188 29 155 4.84E-29 T 15-10-2018 IPR035938 Hemerythrin-like superfamily THII_2666 eafb575d379111027dcf34dc335d2b4a 276 Pfam PF01710 Transposase 1 116 1.5E-16 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_2666 eafb575d379111027dcf34dc335d2b4a 276 Pfam PF13358 DDE superfamily endonuclease 133 269 4.5E-31 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_2666 eafb575d379111027dcf34dc335d2b4a 276 SUPERFAMILY SSF46689 3 85 1.19E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_2666 eafb575d379111027dcf34dc335d2b4a 276 Gene3D G3DSA:3.30.420.470 87 273 1.6E-15 T 15-10-2018 THII_0468 d4a674cda0a41c3899d0fe53c45dc095 247 Gene3D G3DSA:3.90.1570.10 23 150 1.6E-7 T 15-10-2018 THII_0468 d4a674cda0a41c3899d0fe53c45dc095 247 SUPERFAMILY SSF52980 23 167 2.36E-17 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0468 d4a674cda0a41c3899d0fe53c45dc095 247 Pfam PF05685 Putative restriction endonuclease 24 181 1.0E-24 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Gene3D G3DSA:2.130.10.10 58 154 1.3E-15 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 SMART SM00320 351 391 220.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 SMART SM00320 296 342 19.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 SMART SM00320 1151 1190 220.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 SMART SM00320 1197 1243 180.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 SMART SM00320 47 85 2.1 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 SMART SM00320 1404 1453 110.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 SMART SM00320 1310 1346 22.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Pfam PF10282 Lactonase, 7-bladed beta-propeller 1323 1469 2.8E-17 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Pfam PF10282 Lactonase, 7-bladed beta-propeller 262 412 7.9E-10 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Pfam PF10282 Lactonase, 7-bladed beta-propeller 1170 1305 4.6E-14 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Pfam PF10282 Lactonase, 7-bladed beta-propeller 117 247 1.8E-14 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Gene3D G3DSA:2.60.40.10 780 880 4.9E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 SUPERFAMILY SSF75011 1212 1512 2.55E-35 T 15-10-2018 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 531 571 3.1E-7 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 403 444 8.1E-9 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 658 700 6.9E-9 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1523 1566 9.5E-11 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1641 1680 1.8E-8 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1027 1061 1.3E-7 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 909 947 1.2E-5 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Pfam PF01345 Domain of unknown function DUF11 1023 1115 2.9E-7 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Pfam PF01345 Domain of unknown function DUF11 406 493 1.1E-8 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Pfam PF01345 Domain of unknown function DUF11 908 982 1.0E-6 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Pfam PF01345 Domain of unknown function DUF11 1648 1728 1.4E-7 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Pfam PF01345 Domain of unknown function DUF11 536 628 2.2E-6 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Pfam PF01345 Domain of unknown function DUF11 659 736 4.4E-10 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Pfam PF01345 Domain of unknown function DUF11 1521 1600 5.0E-13 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 SUPERFAMILY SSF69318 2141 2428 1.94E-6 T 15-10-2018 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 SUPERFAMILY SSF50969 60 397 2.82E-27 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Gene3D G3DSA:2.130.10.10 1314 1472 4.4E-30 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Gene3D G3DSA:2.130.10.10 1133 1313 2.5E-23 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Gene3D G3DSA:2.130.10.10 155 251 7.1E-13 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 Gene3D G3DSA:2.130.10.10 252 420 2.3E-21 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0260 6d6ff40ff08f5b518e3a0dc381b9abfe 2432 SUPERFAMILY SSF50956 1115 1263 1.09E-8 T 15-10-2018 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 402 421 - T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 Pfam PF04552 Sigma-54, DNA binding domain 356 513 5.3E-70 T 15-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 493 500 - T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 1.6E-12 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 512 2.1E-151 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 PIRSF PIRSF000774 1 515 9.2E-155 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 Gene3D G3DSA:1.10.10.60 455 512 1.5E-23 T 15-10-2018 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 PRINTS PR00045 Sigma-54 factor signature 488 506 7.9E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 PRINTS PR00045 Sigma-54 factor signature 414 426 7.9E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 PRINTS PR00045 Sigma-54 factor signature 430 441 7.9E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 PRINTS PR00045 Sigma-54 factor signature 224 241 7.9E-31 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 Pfam PF04963 Sigma-54 factor, core binding domain 151 341 1.8E-64 T 15-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 THII_1254 22b748dd8c0e44a0e5a6004ea5f702e1 515 Gene3D G3DSA:1.10.10.1330 154 282 2.4E-26 T 15-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily THII_0247 fea1f258d5683ff1af76a71fba97aa49 336 SUPERFAMILY SSF103190 137 274 8.63E-5 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily THII_0247 fea1f258d5683ff1af76a71fba97aa49 336 Gene3D G3DSA:3.30.450.20 116 271 2.1E-5 T 15-10-2018 THII_0882 47da0f3f924ed9095b775d4d0381a27c 289 Pfam PF00892 EamA-like transporter family 147 280 1.5E-21 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 THII_0882 47da0f3f924ed9095b775d4d0381a27c 289 Pfam PF00892 EamA-like transporter family 7 135 9.7E-12 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 THII_0882 47da0f3f924ed9095b775d4d0381a27c 289 SUPERFAMILY SSF103481 183 285 5.75E-14 T 15-10-2018 THII_0882 47da0f3f924ed9095b775d4d0381a27c 289 SUPERFAMILY SSF103481 39 136 1.7E-11 T 15-10-2018 THII_0257 12ead0ac9a264289c008283eef957e8a 469 SUPERFAMILY SSF54368 3 100 5.89E-35 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 THII_0257 12ead0ac9a264289c008283eef957e8a 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 15-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 THII_0257 12ead0ac9a264289c008283eef957e8a 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 15-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 THII_0257 12ead0ac9a264289c008283eef957e8a 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.4E-29 T 15-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 THII_0257 12ead0ac9a264289c008283eef957e8a 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 2.0E-133 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 THII_0257 12ead0ac9a264289c008283eef957e8a 469 SMART SM01230 102 379 1.0E-143 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 THII_0257 12ead0ac9a264289c008283eef957e8a 469 Gene3D G3DSA:3.30.590.10 105 457 2.6E-142 T 15-10-2018 THII_0257 12ead0ac9a264289c008283eef957e8a 469 SUPERFAMILY SSF55931 102 468 1.47E-135 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 THII_0257 12ead0ac9a264289c008283eef957e8a 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 15-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 THII_0257 12ead0ac9a264289c008283eef957e8a 469 Gene3D G3DSA:3.10.20.70 2 104 2.2E-38 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 THII_0257 12ead0ac9a264289c008283eef957e8a 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 5.2E-199 T 15-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 Gene3D G3DSA:3.30.70.3400 225 435 1.2E-45 T 15-10-2018 THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 611 46.918 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 343 591 7.4E-77 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 Pfam PF13721 SecD export protein N-terminal TM region 1 102 4.2E-32 T 15-10-2018 IPR027398 SecD export protein N-terminal TM domain THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 597 1.2E-139 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 SUPERFAMILY SSF82866 408 603 1.83E-42 T 15-10-2018 THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 Pfam PF02355 Protein export membrane protein 430 599 2.4E-20 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 Gene3D G3DSA:3.30.1360.200 283 429 1.2E-45 T 15-10-2018 THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 Pfam PF07549 SecD/SecF GG Motif 120 140 2.8E-5 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 1.7E-6 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 PRINTS PR00702 Acriflavin resistance protein family signature 575 598 1.7E-6 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_1209 b4d1801437e08eff784acb6599ed1ec7 612 PRINTS PR00702 Acriflavin resistance protein family signature 500 524 1.7E-6 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 THII_2448 54e4805c3aa680043f76f64f366e945e 244 Gene3D G3DSA:3.40.50.150 40 228 1.8E-17 T 15-10-2018 THII_2448 54e4805c3aa680043f76f64f366e945e 244 SUPERFAMILY SSF53335 60 203 7.78E-13 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2448 54e4805c3aa680043f76f64f366e945e 244 Pfam PF13578 Methyltransferase domain 69 196 5.7E-12 T 15-10-2018 THII_3144 960b74f06c7c9f872b682992a74efaba 439 SUPERFAMILY SSF53850 75 262 4.02E-13 T 15-10-2018 THII_3144 960b74f06c7c9f872b682992a74efaba 439 Gene3D G3DSA:3.40.190.10 180 406 2.3E-17 T 15-10-2018 THII_0915 358083ce0d8dccb744bcbbbe0c5737bf 547 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 38 157 4.5E-21 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0915 358083ce0d8dccb744bcbbbe0c5737bf 547 SUPERFAMILY SSF143243 7 205 3.27E-33 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0915 358083ce0d8dccb744bcbbbe0c5737bf 547 Pfam PF00374 Nickel-dependent hydrogenase 229 295 1.2E-7 T 15-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 THII_0915 358083ce0d8dccb744bcbbbe0c5737bf 547 Gene3D G3DSA:1.10.645.20 192 546 5.2E-107 T 15-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0915 358083ce0d8dccb744bcbbbe0c5737bf 547 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 304 469 9.7E-35 T 15-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0915 358083ce0d8dccb744bcbbbe0c5737bf 547 SUPERFAMILY SSF56762 201 546 3.01E-96 T 15-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0915 358083ce0d8dccb744bcbbbe0c5737bf 547 Gene3D G3DSA:3.30.460.80 62 135 5.6E-13 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0915 358083ce0d8dccb744bcbbbe0c5737bf 547 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 157 4.0E-13 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0707 9a914f06302568140e704d341218ef55 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 THII_0707 9a914f06302568140e704d341218ef55 158 Gene3D G3DSA:1.10.287.180 1 75 1.0E-30 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 THII_0707 9a914f06302568140e704d341218ef55 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 2.8E-30 T 15-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 THII_0707 9a914f06302568140e704d341218ef55 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.2E-29 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 THII_0707 9a914f06302568140e704d341218ef55 158 PIRSF PIRSF006092 1 158 5.1E-51 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 THII_0707 9a914f06302568140e704d341218ef55 158 SUPERFAMILY SSF46557 3 78 7.59E-28 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 THII_0707 9a914f06302568140e704d341218ef55 158 Gene3D G3DSA:3.10.50.30 76 158 2.2E-31 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 THII_0707 9a914f06302568140e704d341218ef55 158 SUPERFAMILY SSF54534 83 157 3.79E-24 T 15-10-2018 THII_0707 9a914f06302568140e704d341218ef55 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.91 T 15-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 THII_0707 9a914f06302568140e704d341218ef55 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 THII_0707 9a914f06302568140e704d341218ef55 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.3E-56 T 15-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 THII_3885 d94c259f2080ed9caf8737c6c45bfda4 355 PIRSF PIRSF035009 1 355 2.5E-138 T 15-10-2018 IPR017035 Uncharacterised conserved protein UCP035009, HsdR, All3000-type THII_3885 d94c259f2080ed9caf8737c6c45bfda4 355 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 24 124 6.9E-12 T 15-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain THII_0045 3409f9e0765b2f32b814f0320429b917 72 Gene3D G3DSA:3.30.160.250 1 67 1.1E-6 T 15-10-2018 THII_0045 3409f9e0765b2f32b814f0320429b917 72 SUPERFAMILY SSF143100 1 58 4.19E-12 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like THII_1794 a4bf2ed9d0519603b81502e73a2a43ec 509 Pfam PF00795 Carbon-nitrogen hydrolase 229 463 1.0E-31 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 THII_1794 a4bf2ed9d0519603b81502e73a2a43ec 509 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 66 454 8.9E-99 T 15-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 THII_1794 a4bf2ed9d0519603b81502e73a2a43ec 509 SUPERFAMILY SSF56317 225 484 8.76E-37 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily THII_1794 a4bf2ed9d0519603b81502e73a2a43ec 509 Gene3D G3DSA:3.60.110.10 247 471 6.8E-16 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily THII_1794 a4bf2ed9d0519603b81502e73a2a43ec 509 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 12 492 23.247 T 15-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 THII_1840 c22c3625d271f7ec083bd3ba1a0eb7f2 188 Pfam PF09419 Mitochondrial PGP phosphatase 29 141 8.0E-8 T 15-10-2018 IPR027706 Mitochondrial PGP phosphatase KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 THII_1840 c22c3625d271f7ec083bd3ba1a0eb7f2 188 SUPERFAMILY SSF56784 28 154 1.09E-11 T 15-10-2018 IPR036412 HAD-like superfamily THII_1840 c22c3625d271f7ec083bd3ba1a0eb7f2 188 Gene3D G3DSA:3.40.50.1000 27 170 3.4E-9 T 15-10-2018 IPR023214 HAD superfamily THII_1453 45067f7d5186dcadd6ae90ea3c5d0758 361 SUPERFAMILY SSF51556 5 359 6.31E-74 T 15-10-2018 IPR032466 Metal-dependent hydrolase THII_1453 45067f7d5186dcadd6ae90ea3c5d0758 361 Gene3D G3DSA:3.20.20.140 3 358 7.0E-88 T 15-10-2018 THII_1453 45067f7d5186dcadd6ae90ea3c5d0758 361 Pfam PF04909 Amidohydrolase 9 359 2.0E-28 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 THII_2618 6b87660e664e242da537d880f4c6e031 106 Pfam PF13358 DDE superfamily endonuclease 10 92 3.8E-17 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_2618 6b87660e664e242da537d880f4c6e031 106 Gene3D G3DSA:3.30.420.470 1 105 1.2E-10 T 15-10-2018 THII_0886 a6950b8fdf7922334cf7bc2f2b5a2060 159 Gene3D G3DSA:3.50.30.40 1 159 4.5E-62 T 15-10-2018 THII_0886 a6950b8fdf7922334cf7bc2f2b5a2060 159 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 3.3E-64 T 15-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 THII_0886 a6950b8fdf7922334cf7bc2f2b5a2060 159 SUPERFAMILY SSF89562 3 155 1.83E-46 T 15-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily THII_0886 a6950b8fdf7922334cf7bc2f2b5a2060 159 Pfam PF03737 Aldolase/RraA 5 153 8.6E-41 T 15-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SUPERFAMILY SSF55785 910 1028 6.6E-12 T 15-10-2018 IPR035965 PAS domain superfamily THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:3.30.565.10 526 693 6.9E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00388 1467 1526 1.3 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00388 457 525 1.4E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Pfam PF00072 Response regulator receiver domain 771 884 3.8E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:3.30.565.10 1551 1706 8.6E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:1.10.287.130 445 525 7.5E-21 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Pfam PF00512 His Kinase A (phospho-acceptor) domain 458 522 2.8E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Pfam PF13426 PAS domain 1330 1430 2.0E-8 T 15-10-2018 IPR000014 PAS domain THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 571 690 9.8E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1598 1704 6.1E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 7.4E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 632 7.4E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 646 7.4E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 7.4E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:3.30.450.20 901 1032 1.9E-16 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:3.30.450.20 1188 1312 1.2E-20 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:3.30.450.20 221 259 1.4E-19 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:3.30.450.20 1313 1427 1.6E-29 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Pfam PF00672 HAMP domain 390 439 1.6E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SUPERFAMILY SSF55874 514 693 6.55E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:3.30.450.20 164 220 1.4E-19 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00304 390 442 1.3E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SUPERFAMILY SSF55785 1080 1187 2.79E-14 T 15-10-2018 IPR035965 PAS domain superfamily THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Pfam PF08448 PAS fold 1204 1313 1.6E-13 T 15-10-2018 IPR013656 PAS fold-4 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Pfam PF08448 PAS fold 911 1027 8.7E-7 T 15-10-2018 IPR013656 PAS fold-4 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:1.10.287.130 1444 1545 3.7E-20 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Pfam PF08447 PAS fold 1108 1178 4.0E-10 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:3.30.450.20 1065 1136 1.0E-12 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1201 1318 2.1E-16 T 15-10-2018 IPR000014 PAS domain THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1325 1438 2.3E-17 T 15-10-2018 IPR000014 PAS domain THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1116 1192 5.3E-6 T 15-10-2018 IPR000014 PAS domain THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 902 1031 5.3E-10 T 15-10-2018 IPR000014 PAS domain THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:2.10.70.100 1139 1187 1.4E-13 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Pfam PF02743 Cache domain 50 353 1.8E-24 T 15-10-2018 IPR033479 Double Cache domain 1 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:1.20.1480.50 362 444 5.6E-13 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00387 570 692 2.7E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00387 1593 1705 2.4E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SUPERFAMILY SSF55785 1330 1440 3.29E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SUPERFAMILY SSF47384 440 521 4.71E-19 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SUPERFAMILY SSF52172 768 900 2.7E-37 T 15-10-2018 IPR011006 CheY-like superfamily THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00086 983 1025 0.012 T 15-10-2018 IPR001610 PAC motif THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00086 1269 1311 230.0 T 15-10-2018 IPR001610 PAC motif THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00086 1391 1431 33.0 T 15-10-2018 IPR001610 PAC motif THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00086 1143 1185 0.032 T 15-10-2018 IPR001610 PAC motif THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 Gene3D G3DSA:3.40.50.2300 768 900 1.2E-34 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SUPERFAMILY SSF55785 1182 1308 7.68E-22 T 15-10-2018 IPR035965 PAS domain superfamily THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SUPERFAMILY SSF158472 390 441 9.55E-10 T 15-10-2018 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SUPERFAMILY SSF55874 1552 1704 2.23E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00448 769 883 1.5E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00091 1319 1385 7.2E-6 T 15-10-2018 IPR000014 PAS domain THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00091 1197 1264 6.6E-7 T 15-10-2018 IPR000014 PAS domain THII_0443 69663b3b0cab5ab8c1d9273f07a1788d 1717 SMART SM00091 905 975 0.0069 T 15-10-2018 IPR000014 PAS domain THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 SUPERFAMILY SSF55681 108 587 3.87E-109 T 15-10-2018 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 Gene3D G3DSA:3.30.930.10 117 585 5.9E-198 T 15-10-2018 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 Gene3D G3DSA:2.40.50.140 1 106 1.2E-35 T 15-10-2018 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 2.7E-254 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 1.6E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 1.6E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 1.6E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 1.6E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 561 1.7E-108 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 Gene3D G3DSA:3.30.1360.30 273 423 5.9E-198 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 SUPERFAMILY SSF50249 1 105 6.86E-33 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 SUPERFAMILY SSF55261 291 422 1.26E-42 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 9.4E-19 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 587 34.219 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 THII_1438 690ef6e4845632599b99ff71d0e8eda3 594 Pfam PF02938 GAD domain 309 409 2.0E-28 T 15-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 THII_1153 e5475d2e116a4f471d96069dc356695a 508 SUPERFAMILY SSF55154 1 210 1.8E-41 T 15-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 THII_1153 e5475d2e116a4f471d96069dc356695a 508 Pfam PF01928 CYTH domain 4 198 8.1E-26 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 THII_1153 e5475d2e116a4f471d96069dc356695a 508 Gene3D G3DSA:1.40.20.10 208 505 1.9E-68 T 15-10-2018 IPR038186 CHAD domain superfamily THII_1153 e5475d2e116a4f471d96069dc356695a 508 SMART SM01118 2 204 2.6E-38 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 THII_1153 e5475d2e116a4f471d96069dc356695a 508 SMART SM00880 229 493 5.7E-43 T 15-10-2018 IPR007899 CHAD domain THII_1153 e5475d2e116a4f471d96069dc356695a 508 Gene3D G3DSA:2.40.320.10 2 199 4.0E-34 T 15-10-2018 THII_1153 e5475d2e116a4f471d96069dc356695a 508 Pfam PF05235 CHAD domain 230 458 8.3E-49 T 15-10-2018 IPR007899 CHAD domain THII_0754 6418ee7ce97ef3278869aad3eb53bca6 691 Pfam PF03030 Inorganic H+ pyrophosphatase 18 685 4.8E-268 T 15-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 THII_0754 6418ee7ce97ef3278869aad3eb53bca6 691 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 5 690 25.617 T 15-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 THII_0754 6418ee7ce97ef3278869aad3eb53bca6 691 PIRSF PIRSF001265 2 690 1.6E-263 T 15-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 THII_0754 6418ee7ce97ef3278869aad3eb53bca6 691 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 10 689 2.4E-266 T 15-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 THII_2480 de75a76f819415f39402f6f932befb13 360 PIRSF PIRSF038945 2 357 1.0E-161 T 15-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 THII_2480 de75a76f819415f39402f6f932befb13 360 Gene3D G3DSA:3.40.50.1100 66 162 2.7E-124 T 15-10-2018 THII_2480 de75a76f819415f39402f6f932befb13 360 Gene3D G3DSA:3.40.50.1100 14 330 2.7E-124 T 15-10-2018 THII_2480 de75a76f819415f39402f6f932befb13 360 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 58 71 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 THII_2480 de75a76f819415f39402f6f932befb13 360 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 28 324 2.8E-70 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme THII_2480 de75a76f819415f39402f6f932befb13 360 SUPERFAMILY SSF53686 10 356 3.54E-106 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THII_2480 de75a76f819415f39402f6f932befb13 360 TIGRFAM TIGR00260 thrC: threonine synthase 13 331 9.3E-97 T 15-10-2018 IPR004450 Threonine synthase-like THII_1045 6528b73f12a0a4b94b644a0ad5fbec45 138 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 19 4.7E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_1045 6528b73f12a0a4b94b644a0ad5fbec45 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_1045 6528b73f12a0a4b94b644a0ad5fbec45 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 19 2.6E-4 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3715 8108ab2cc8ec588e6898718ef3ed6e69 368 ProSitePatterns PS00534 Ferrochelatase signature. 207 225 - T 15-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 THII_3715 8108ab2cc8ec588e6898718ef3ed6e69 368 SUPERFAMILY SSF53800 17 349 4.58E-107 T 15-10-2018 THII_3715 8108ab2cc8ec588e6898718ef3ed6e69 368 Gene3D G3DSA:3.40.50.1400 20 337 6.1E-100 T 15-10-2018 THII_3715 8108ab2cc8ec588e6898718ef3ed6e69 368 Gene3D G3DSA:3.40.50.1400 181 319 6.1E-100 T 15-10-2018 THII_3715 8108ab2cc8ec588e6898718ef3ed6e69 368 Pfam PF00762 Ferrochelatase 20 337 1.7E-112 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 THII_3715 8108ab2cc8ec588e6898718ef3ed6e69 368 Hamap MF_00323 Ferrochelatase [hemH]. 17 338 37.229 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 THII_3715 8108ab2cc8ec588e6898718ef3ed6e69 368 TIGRFAM TIGR00109 hemH: ferrochelatase 18 338 5.9E-97 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 6.8E-143 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 SUPERFAMILY SSF52540 151 333 4.14E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 9.8E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 9.8E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 9.8E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 9.8E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 Gene3D G3DSA:3.40.50.300 159 335 6.7E-51 T 15-10-2018 THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 Pfam PF01018 GTP1/OBG 4 157 2.4E-60 T 15-10-2018 IPR006169 GTP1/OBG domain THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 Hamap MF_01454 GTPase Obg [obg]. 2 332 47.781 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 SUPERFAMILY SSF82051 2 157 1.7E-57 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 PIRSF PIRSF002401 1 335 1.4E-135 T 15-10-2018 IPR035101 GTP-binding protein, Obg-type THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 15-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 Pfam PF01926 50S ribosome-binding GTPase 161 283 1.1E-23 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2918 3176f9f52cf9c345bf669db68d6e307c 335 Gene3D G3DSA:2.70.210.12 1 158 8.5E-61 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 PRINTS PR00463 E-class P450 group I signature 40 59 2.0E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 PRINTS PR00463 E-class P450 group I signature 259 276 2.0E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 PRINTS PR00463 E-class P450 group I signature 279 305 2.0E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 PRINTS PR00463 E-class P450 group I signature 361 385 2.0E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 PRINTS PR00463 E-class P450 group I signature 406 429 2.0E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 PRINTS PR00463 E-class P450 group I signature 321 339 2.0E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 PRINTS PR00463 E-class P450 group I signature 396 406 2.0E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 PRINTS PR00385 P450 superfamily signature 397 406 7.4E-10 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 PRINTS PR00385 P450 superfamily signature 322 333 7.4E-10 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 PRINTS PR00385 P450 superfamily signature 406 417 7.4E-10 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 PRINTS PR00385 P450 superfamily signature 270 287 7.4E-10 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 Pfam PF00067 Cytochrome P450 14 433 4.0E-94 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 Gene3D G3DSA:1.10.630.10 12 458 1.8E-127 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 399 408 - T 15-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 THII_0230 4ba92e73f2e267917ffa1ecbde58d7ad 458 SUPERFAMILY SSF48264 4 458 7.33E-118 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 THII_2545 9b512c7d57e8e234ff84f3f1fea45221 166 Gene3D G3DSA:2.160.10.10 65 166 5.8E-27 T 15-10-2018 THII_2545 9b512c7d57e8e234ff84f3f1fea45221 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 121 149 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 THII_2545 9b512c7d57e8e234ff84f3f1fea45221 166 SUPERFAMILY SSF51161 12 163 1.83E-34 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_2545 9b512c7d57e8e234ff84f3f1fea45221 166 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 112 146 9.3E-6 T 15-10-2018 IPR001451 Hexapeptide repeat THII_2545 9b512c7d57e8e234ff84f3f1fea45221 166 PIRSF PIRSF000441 2 166 7.6E-49 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 THII_1945 27739c41b1e5a83feb06af44e198af78 176 Pfam PF01797 Transposase IS200 like 26 131 1.3E-4 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_1945 27739c41b1e5a83feb06af44e198af78 176 SUPERFAMILY SSF143422 1 139 6.67E-29 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_1945 27739c41b1e5a83feb06af44e198af78 176 Gene3D G3DSA:3.30.70.1290 1 175 5.3E-46 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_1945 27739c41b1e5a83feb06af44e198af78 176 SMART SM01321 9 133 8.7E-30 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 Gene3D G3DSA:3.40.140.20 207 363 1.5E-57 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 454 1.2E-120 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 PIRSF PIRSF000414 1 523 2.1E-225 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 Pfam PF02142 MGS-like domain 16 128 4.2E-26 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 Gene3D G3DSA:3.40.140.20 386 523 5.0E-62 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 SUPERFAMILY SSF52335 4 193 4.71E-67 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 Gene3D G3DSA:3.40.50.1380 1 195 4.4E-83 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 SMART SM00851 16 129 2.5E-55 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 523 1.8E-239 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 4 523 45.149 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 SUPERFAMILY SSF53927 211 523 6.12E-132 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 THII_1633 8d5cac667e239b7772b9d25e12ff660a 523 SMART SM00798 134 455 1.9E-210 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 THII_3744 ad86e199850d2419631e406cb4cade85 945 Gene3D G3DSA:3.30.190.20 130 241 2.4E-239 T 15-10-2018 THII_3744 ad86e199850d2419631e406cb4cade85 945 Gene3D G3DSA:3.40.50.300 620 939 4.1E-141 T 15-10-2018 THII_3744 ad86e199850d2419631e406cb4cade85 945 ProSitePatterns PS00211 ABC transporters family signature. 833 847 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_3744 ad86e199850d2419631e406cb4cade85 945 SUPERFAMILY SSF52540 616 912 9.41E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3744 ad86e199850d2419631e406cb4cade85 945 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_3744 ad86e199850d2419631e406cb4cade85 945 Gene3D G3DSA:1.20.1580.10 695 833 4.1E-141 T 15-10-2018 THII_3744 ad86e199850d2419631e406cb4cade85 945 Gene3D G3DSA:1.20.1580.10 90 496 2.4E-239 T 15-10-2018 THII_3744 ad86e199850d2419631e406cb4cade85 945 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 943 22.432 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 THII_3744 ad86e199850d2419631e406cb4cade85 945 Gene3D G3DSA:3.40.50.300 6 598 2.4E-239 T 15-10-2018 THII_3744 ad86e199850d2419631e406cb4cade85 945 Gene3D G3DSA:1.10.8.280 292 407 2.4E-239 T 15-10-2018 THII_3744 ad86e199850d2419631e406cb4cade85 945 SUPERFAMILY SSF52540 1 573 8.95E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3744 ad86e199850d2419631e406cb4cade85 945 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 928 0.0 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 THII_3299 5dc621392e5873e854d13ebd617a6b93 181 Pfam PF01923 Cobalamin adenosyltransferase 4 167 2.2E-49 T 15-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 THII_3299 5dc621392e5873e854d13ebd617a6b93 181 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 6 174 4.7E-45 T 15-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 THII_3299 5dc621392e5873e854d13ebd617a6b93 181 SUPERFAMILY SSF89028 4 175 4.51E-43 T 15-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 THII_3299 5dc621392e5873e854d13ebd617a6b93 181 Gene3D G3DSA:1.20.1200.10 13 179 4.6E-49 T 15-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 THII_3299 5dc621392e5873e854d13ebd617a6b93 181 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 10 153 8.0E-23 T 15-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 THII_1813 d63503ae695290c9936ed0331cf41ed8 469 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 38 443 2.5E-109 T 15-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 THII_1813 d63503ae695290c9936ed0331cf41ed8 469 SUPERFAMILY SSF53807 7 455 1.49E-136 T 15-10-2018 THII_1813 d63503ae695290c9936ed0331cf41ed8 469 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 123 137 - T 15-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 THII_1813 d63503ae695290c9936ed0331cf41ed8 469 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 4 457 2.6E-212 T 15-10-2018 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0009399|GO:0065003 THII_1813 d63503ae695290c9936ed0331cf41ed8 469 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 56 63 - T 15-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 THII_1813 d63503ae695290c9936ed0331cf41ed8 469 Gene3D G3DSA:3.40.50.12380 179 451 8.3E-118 T 15-10-2018 THII_1813 d63503ae695290c9936ed0331cf41ed8 469 Gene3D G3DSA:3.40.50.1980 25 178 4.6E-52 T 15-10-2018 THII_2103 ec28304db100ad98eba03ad931842390 294 SUPERFAMILY SSF109998 27 161 1.14E-13 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily THII_2103 ec28304db100ad98eba03ad931842390 294 Pfam PF00639 PPIC-type PPIASE domain 146 224 1.6E-21 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 THII_2103 ec28304db100ad98eba03ad931842390 294 Gene3D G3DSA:3.10.50.40 127 270 4.9E-30 T 15-10-2018 THII_2103 ec28304db100ad98eba03ad931842390 294 SUPERFAMILY SSF54534 131 224 7.85E-26 T 15-10-2018 THII_3195 6c91391d50dd0a4158d50bd5934c231b 259 Gene3D G3DSA:3.40.50.720 1 237 3.0E-21 T 15-10-2018 THII_3195 6c91391d50dd0a4158d50bd5934c231b 259 SUPERFAMILY SSF51735 1 225 9.46E-22 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3195 6c91391d50dd0a4158d50bd5934c231b 259 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 73 1.3E-5 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 THII_3081 81d7e1d8fa028d3ad3845ff6974fddd5 265 Gene3D G3DSA:3.20.20.70 2 264 8.1E-121 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3081 81d7e1d8fa028d3ad3845ff6974fddd5 265 Hamap MF_00443 Thiazole synthase [thiG]. 10 265 42.985 T 15-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 THII_3081 81d7e1d8fa028d3ad3845ff6974fddd5 265 SUPERFAMILY SSF110399 10 250 1.16E-89 T 15-10-2018 THII_3081 81d7e1d8fa028d3ad3845ff6974fddd5 265 Pfam PF05690 Thiazole biosynthesis protein ThiG 13 259 1.4E-111 T 15-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 THII_1175 291b3ad41e15c318556c74237dd8b47c 150 Pfam PF17384 RimP C-terminal SH3 domain 85 149 7.0E-14 T 15-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal THII_1175 291b3ad41e15c318556c74237dd8b47c 150 Gene3D G3DSA:3.30.300.70 2 79 3.5E-23 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily THII_1175 291b3ad41e15c318556c74237dd8b47c 150 SUPERFAMILY SSF75420 4 82 3.27E-22 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily THII_1175 291b3ad41e15c318556c74237dd8b47c 150 SUPERFAMILY SSF74942 83 149 3.01E-15 T 15-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily THII_1175 291b3ad41e15c318556c74237dd8b47c 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 4 150 24.152 T 15-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 THII_1175 291b3ad41e15c318556c74237dd8b47c 150 Pfam PF02576 RimP N-terminal domain 11 82 3.5E-24 T 15-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal THII_3198 b9fae2d5850e87307f267778eab9ad71 498 SUPERFAMILY SSF53383 151 496 1.32E-94 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_3198 b9fae2d5850e87307f267778eab9ad71 498 Gene3D G3DSA:3.40.640.10 146 375 7.9E-75 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_3198 b9fae2d5850e87307f267778eab9ad71 498 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 156 493 2.0E-99 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_3198 b9fae2d5850e87307f267778eab9ad71 498 Gene3D G3DSA:3.90.1150.10 379 497 8.8E-32 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_3692 59a3f034deeebc4a1fa219b00f4bba6f 330 SUPERFAMILY SSF52518 23 304 3.44E-76 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_3692 59a3f034deeebc4a1fa219b00f4bba6f 330 Gene3D G3DSA:3.40.50.970 9 96 3.6E-17 T 15-10-2018 THII_3692 59a3f034deeebc4a1fa219b00f4bba6f 330 Gene3D G3DSA:3.40.50.970 97 306 2.7E-64 T 15-10-2018 THII_3692 59a3f034deeebc4a1fa219b00f4bba6f 330 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 55 216 4.9E-25 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 THII_1178 867ea87b901bd5e23fce84a837e091f7 120 Pfam PF02033 Ribosome-binding factor A 7 109 6.4E-30 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 THII_1178 867ea87b901bd5e23fce84a837e091f7 120 SUPERFAMILY SSF89919 3 113 3.14E-32 T 15-10-2018 IPR023799 Ribosome-binding factor A domain superfamily THII_1178 867ea87b901bd5e23fce84a837e091f7 120 Gene3D G3DSA:3.30.300.20 1 104 5.6E-34 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta THII_1178 867ea87b901bd5e23fce84a837e091f7 120 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 1.0E-19 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 THII_1178 867ea87b901bd5e23fce84a837e091f7 120 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 15-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 THII_1178 867ea87b901bd5e23fce84a837e091f7 120 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 110 24.13 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 THII_1178 867ea87b901bd5e23fce84a837e091f7 120 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 115 8.6E-34 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 THII_0018 9a416a50256c9add7e4a8c6b78f1426b 350 SUPERFAMILY SSF53187 64 346 1.72E-48 T 15-10-2018 THII_0018 9a416a50256c9add7e4a8c6b78f1426b 350 Pfam PF04389 Peptidase family M28 118 337 1.0E-26 T 15-10-2018 IPR007484 Peptidase M28 THII_0018 9a416a50256c9add7e4a8c6b78f1426b 350 Gene3D G3DSA:3.40.630.10 61 349 8.3E-59 T 15-10-2018 THII_1646 71ff84a71419077e0ac7293c3705dc21 375 Pfam PF01565 FAD binding domain 40 167 4.8E-16 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 THII_1646 71ff84a71419077e0ac7293c3705dc21 375 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 230 33.511 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_1646 71ff84a71419077e0ac7293c3705dc21 375 SUPERFAMILY SSF56176 20 198 2.24E-33 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 THII_1646 71ff84a71419077e0ac7293c3705dc21 375 Gene3D G3DSA:3.30.43.10 2 89 2.7E-12 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 THII_1646 71ff84a71419077e0ac7293c3705dc21 375 Gene3D G3DSA:3.30.465.10 93 221 2.6E-34 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_0879 19b87ba9c23ea791063692aae3dc0fca 390 Pfam PF01061 ABC-2 type transporter 157 311 1.1E-13 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 THII_3851 a1345ed875ec3256ece5217f2dac5008 144 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 15-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 THII_3851 a1345ed875ec3256ece5217f2dac5008 144 Gene3D G3DSA:3.90.1180.10 1 141 5.7E-61 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 THII_3851 a1345ed875ec3256ece5217f2dac5008 144 PIRSF PIRSF002181 1 140 5.8E-51 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 THII_3851 a1345ed875ec3256ece5217f2dac5008 144 Pfam PF00572 Ribosomal protein L13 15 137 1.7E-55 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 THII_3851 a1345ed875ec3256ece5217f2dac5008 144 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 139 9.1E-63 T 15-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3851 a1345ed875ec3256ece5217f2dac5008 144 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 139 28.533 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 THII_3851 a1345ed875ec3256ece5217f2dac5008 144 SUPERFAMILY SSF52161 1 138 4.06E-59 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 THII_3354 4bfcd0757c08a9aeba3defe8acf6bed1 216 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 99 110 - T 15-10-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 THII_3354 4bfcd0757c08a9aeba3defe8acf6bed1 216 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 60 67 - T 15-10-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 THII_3354 4bfcd0757c08a9aeba3defe8acf6bed1 216 SUPERFAMILY SSF55895 25 200 2.88E-33 T 15-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 THII_3354 4bfcd0757c08a9aeba3defe8acf6bed1 216 Gene3D G3DSA:3.90.730.10 18 215 8.2E-32 T 15-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 THII_3354 4bfcd0757c08a9aeba3defe8acf6bed1 216 Pfam PF00445 Ribonuclease T2 family 29 130 4.1E-15 T 15-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 THII_1487 a851d14b4b7fa4f2578af68a296fdbf5 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 7.4E-23 T 15-10-2018 IPR010035 ThiS, thiamine-biosynthesis THII_1487 a851d14b4b7fa4f2578af68a296fdbf5 69 SUPERFAMILY SSF54285 3 65 9.32E-18 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THII_1487 a851d14b4b7fa4f2578af68a296fdbf5 69 Gene3D G3DSA:3.10.20.30 1 66 1.7E-21 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_1487 a851d14b4b7fa4f2578af68a296fdbf5 69 Pfam PF02597 ThiS family 5 66 2.7E-13 T 15-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 THII_3316 5f8e9e7a5463d500679070d903a7bddd 292 Pfam PF08241 Methyltransferase domain 54 151 9.6E-23 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 THII_3316 5f8e9e7a5463d500679070d903a7bddd 292 SUPERFAMILY SSF53335 15 219 9.04E-40 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3316 5f8e9e7a5463d500679070d903a7bddd 292 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 9 269 32.686 T 15-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 THII_3316 5f8e9e7a5463d500679070d903a7bddd 292 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 17 268 3.6E-72 T 15-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 THII_3316 5f8e9e7a5463d500679070d903a7bddd 292 Gene3D G3DSA:3.40.50.150 7 264 4.0E-36 T 15-10-2018 THII_0996 6c9ed7f91bb98698b326b011ed72f810 342 SUPERFAMILY SSF53901 181 317 5.56E-9 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_0996 6c9ed7f91bb98698b326b011ed72f810 342 Gene3D G3DSA:3.40.47.10 109 321 1.4E-7 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_0996 6c9ed7f91bb98698b326b011ed72f810 342 SUPERFAMILY SSF53901 120 198 8.79E-6 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2078 84d5950e26ee001638caa2ff302ae784 630 Pfam PF02705 K+ potassium transporter 19 551 2.0E-217 T 15-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 THII_2078 84d5950e26ee001638caa2ff302ae784 630 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 10 630 35.354 T 15-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup THII_0178 560b743d9cb5dd34eae1cfe0a996750c 256 PRINTS PR00721 Stomatin signature 72 93 1.1E-61 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_0178 560b743d9cb5dd34eae1cfe0a996750c 256 PRINTS PR00721 Stomatin signature 127 150 1.1E-61 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_0178 560b743d9cb5dd34eae1cfe0a996750c 256 PRINTS PR00721 Stomatin signature 151 169 1.1E-61 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_0178 560b743d9cb5dd34eae1cfe0a996750c 256 PRINTS PR00721 Stomatin signature 170 191 1.1E-61 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_0178 560b743d9cb5dd34eae1cfe0a996750c 256 PRINTS PR00721 Stomatin signature 195 218 1.1E-61 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_0178 560b743d9cb5dd34eae1cfe0a996750c 256 PRINTS PR00721 Stomatin signature 25 47 1.1E-61 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_0178 560b743d9cb5dd34eae1cfe0a996750c 256 PRINTS PR00721 Stomatin signature 107 124 1.1E-61 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_0178 560b743d9cb5dd34eae1cfe0a996750c 256 Pfam PF01145 SPFH domain / Band 7 family 23 191 1.3E-32 T 15-10-2018 IPR001107 Band 7 domain THII_0178 560b743d9cb5dd34eae1cfe0a996750c 256 SMART SM00244 18 175 3.9E-57 T 15-10-2018 IPR001107 Band 7 domain THII_0178 560b743d9cb5dd34eae1cfe0a996750c 256 Gene3D G3DSA:3.30.479.30 46 177 2.4E-46 T 15-10-2018 THII_0178 560b743d9cb5dd34eae1cfe0a996750c 256 SUPERFAMILY SSF117892 49 182 1.96E-42 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily THII_1675 38bb07d117fe228dd6945b3c7c2bce4d 290 SMART SM00887 45 279 4.4E-7 T 15-10-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 THII_1675 38bb07d117fe228dd6945b3c7c2bce4d 290 Gene3D G3DSA:2.60.40.1190 167 289 6.1E-24 T 15-10-2018 THII_1675 38bb07d117fe228dd6945b3c7c2bce4d 290 Gene3D G3DSA:2.60.40.1190 30 166 9.5E-25 T 15-10-2018 THII_1675 38bb07d117fe228dd6945b3c7c2bce4d 290 Pfam PF09459 Ethylbenzene dehydrogenase 47 278 2.2E-21 T 15-10-2018 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 THII_2868 e39da02e692e5c63166c123cf546b024 315 Gene3D G3DSA:3.40.50.1460 65 313 3.8E-34 T 15-10-2018 THII_2868 e39da02e692e5c63166c123cf546b024 315 SUPERFAMILY SSF52129 98 305 5.06E-13 T 15-10-2018 IPR029030 Caspase-like domain superfamily THII_2868 e39da02e692e5c63166c123cf546b024 315 Pfam PF00656 Caspase domain 72 312 2.3E-20 T 15-10-2018 THII_3624 efdd293d5cded8c1c12b634b834d52f3 338 Pfam PF00591 Glycosyl transferase family, a/b domain 74 324 6.0E-102 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 THII_3624 efdd293d5cded8c1c12b634b834d52f3 338 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 64 1.9E-18 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 THII_3624 efdd293d5cded8c1c12b634b834d52f3 338 Gene3D G3DSA:1.20.970.10 1 70 4.0E-28 T 15-10-2018 THII_3624 efdd293d5cded8c1c12b634b834d52f3 338 Gene3D G3DSA:3.40.1030.10 71 338 3.1E-107 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 THII_3624 efdd293d5cded8c1c12b634b834d52f3 338 SUPERFAMILY SSF52418 74 337 2.62E-97 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 THII_3624 efdd293d5cded8c1c12b634b834d52f3 338 SUPERFAMILY SSF47648 1 69 2.75E-20 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 THII_3624 efdd293d5cded8c1c12b634b834d52f3 338 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 333 4.3E-130 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 THII_3624 efdd293d5cded8c1c12b634b834d52f3 338 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 334 37.982 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 THII_3086 b640bf9bbf4d8e143051583755b9a052 115 Pfam PF03206 Nitrogen fixation protein NifW 7 100 9.3E-33 T 15-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 THII_3086 b640bf9bbf4d8e143051583755b9a052 115 Hamap MF_00529 Nitrogenase-stabilizing/protective protein NifW [nifW]. 4 106 21.073 T 15-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 THII_3086 b640bf9bbf4d8e143051583755b9a052 115 PIRSF PIRSF005790 1 108 6.2E-33 T 15-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 THII_0963 6bc071c2340cff5bcf8677a632ca4698 136 Pfam PF00042 Globin 4 96 1.3E-10 T 15-10-2018 IPR000971 Globin GO:0020037 THII_0963 6bc071c2340cff5bcf8677a632ca4698 136 Gene3D G3DSA:1.10.490.10 2 124 1.2E-26 T 15-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 THII_0963 6bc071c2340cff5bcf8677a632ca4698 136 SUPERFAMILY SSF46458 4 121 5.49E-26 T 15-10-2018 IPR009050 Globin-like superfamily THII_2011 a6fa94c1d9565f81286f16047e2eda40 954 Pfam PF09684 Phage tail protein (Tail_P2_I) 228 298 4.4E-5 T 15-10-2018 IPR006521 Tail protein I THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 Gene3D G3DSA:3.40.50.2300 103 233 9.0E-13 T 15-10-2018 THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 SUPERFAMILY SSF52172 104 274 1.41E-11 T 15-10-2018 IPR011006 CheY-like superfamily THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 Gene3D G3DSA:1.10.287.130 242 349 1.3E-16 T 15-10-2018 THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 1.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 1.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 1.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 Pfam PF00072 Response regulator receiver domain 107 217 1.0E-6 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 SUPERFAMILY SSF55874 341 507 3.14E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 Gene3D G3DSA:3.30.565.10 353 511 3.7E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 SUPERFAMILY SSF47384 263 352 4.51E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 SMART SM00387 397 509 9.0E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 Pfam PF00512 His Kinase A (phospho-acceptor) domain 279 349 1.2E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 SMART SM00388 278 351 5.1E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 SMART SM00448 105 227 0.0093 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3792 55b5703b0955b3dd7282ada2e27895d2 518 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 508 1.0E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2510 ea62323a38e90e3b41d70dc16cf77538 398 SUPERFAMILY SSF117892 104 222 6.02E-5 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily THII_2510 ea62323a38e90e3b41d70dc16cf77538 398 Pfam PF01145 SPFH domain / Band 7 family 35 241 1.3E-15 T 15-10-2018 IPR001107 Band 7 domain THII_3693 cda1ca5e32380845509f06c8a49d5903 390 Gene3D G3DSA:3.40.50.920 253 377 8.8E-24 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_3693 cda1ca5e32380845509f06c8a49d5903 390 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 14 231 5.6E-74 T 15-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 THII_3693 cda1ca5e32380845509f06c8a49d5903 390 SUPERFAMILY SSF52518 4 244 5.43E-69 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_3693 cda1ca5e32380845509f06c8a49d5903 390 SUPERFAMILY SSF52922 253 368 4.71E-20 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_3693 cda1ca5e32380845509f06c8a49d5903 390 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 258 356 2.9E-16 T 15-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II THII_3693 cda1ca5e32380845509f06c8a49d5903 390 Gene3D G3DSA:3.40.50.970 1 246 7.3E-98 T 15-10-2018 THII_3234 3755046c75bd86ed8467c9c12ddbc641 348 Pfam PF13614 AAA domain 6 197 7.0E-25 T 15-10-2018 IPR025669 AAA domain THII_3234 3755046c75bd86ed8467c9c12ddbc641 348 SUPERFAMILY SSF52540 6 197 3.26E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3234 3755046c75bd86ed8467c9c12ddbc641 348 Gene3D G3DSA:3.40.50.300 6 297 2.5E-58 T 15-10-2018 THII_0027 09c1b94adf49375ab6202117a58929a3 940 Gene3D G3DSA:2.20.25.90 40 111 9.7E-21 T 15-10-2018 THII_0027 09c1b94adf49375ab6202117a58929a3 940 Gene3D G3DSA:3.40.228.10 186 501 1.1E-53 T 15-10-2018 THII_0027 09c1b94adf49375ab6202117a58929a3 940 Pfam PF01568 Molydopterin dinucleotide binding domain 821 930 1.5E-9 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 THII_0027 09c1b94adf49375ab6202117a58929a3 940 SUPERFAMILY SSF50692 818 940 7.01E-13 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily THII_0027 09c1b94adf49375ab6202117a58929a3 940 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 597 614 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 THII_0027 09c1b94adf49375ab6202117a58929a3 940 Pfam PF00384 Molybdopterin oxidoreductase 109 654 4.3E-41 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0027 09c1b94adf49375ab6202117a58929a3 940 SMART SM00926 47 106 2.3E-13 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0027 09c1b94adf49375ab6202117a58929a3 940 SUPERFAMILY SSF53706 45 650 5.23E-111 T 15-10-2018 THII_0027 09c1b94adf49375ab6202117a58929a3 940 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 51 105 6.0E-10 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0027 09c1b94adf49375ab6202117a58929a3 940 Gene3D G3DSA:2.40.40.20 798 940 2.1E-27 T 15-10-2018 THII_0027 09c1b94adf49375ab6202117a58929a3 940 Gene3D G3DSA:3.40.50.740 512 696 5.7E-17 T 15-10-2018 THII_1247 7345752f286523b7f4edd7c6a2934d4d 337 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 71 146 3.9E-15 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1247 7345752f286523b7f4edd7c6a2934d4d 337 Gene3D G3DSA:1.10.760.10 71 150 1.5E-31 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1247 7345752f286523b7f4edd7c6a2934d4d 337 PRINTS PR00607 Class IE cytochrome C signature 93 103 1.2E-12 T 15-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 THII_1247 7345752f286523b7f4edd7c6a2934d4d 337 PRINTS PR00607 Class IE cytochrome C signature 136 147 1.2E-12 T 15-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 THII_1247 7345752f286523b7f4edd7c6a2934d4d 337 PRINTS PR00607 Class IE cytochrome C signature 121 133 1.2E-12 T 15-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 THII_1247 7345752f286523b7f4edd7c6a2934d4d 337 PRINTS PR00607 Class IE cytochrome C signature 82 93 1.2E-12 T 15-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 THII_1247 7345752f286523b7f4edd7c6a2934d4d 337 SUPERFAMILY SSF46626 72 148 1.98E-18 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0639 03e0f3a7f16a1d9e1b522f9748422bd7 256 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 63 235 8.7E-45 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 THII_0639 03e0f3a7f16a1d9e1b522f9748422bd7 256 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 64 230 5.8E-59 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 THII_3166 80d8d80313fc504ae77f76cbee82fec4 160 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 5 144 33.411 T 15-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 THII_3166 80d8d80313fc504ae77f76cbee82fec4 160 Pfam PF03100 CcmE 8 134 3.7E-47 T 15-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 THII_3166 80d8d80313fc504ae77f76cbee82fec4 160 SUPERFAMILY SSF82093 33 140 2.09E-42 T 15-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 THII_3166 80d8d80313fc504ae77f76cbee82fec4 160 Gene3D G3DSA:2.40.50.140 33 140 3.8E-41 T 15-10-2018 THII_0806 154814d88905bf9dcc946f7c2b624222 409 Gene3D G3DSA:3.30.9.50 82 273 1.1E-101 T 15-10-2018 THII_0806 154814d88905bf9dcc946f7c2b624222 409 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 8 394 1.7E-135 T 15-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 THII_0806 154814d88905bf9dcc946f7c2b624222 409 Gene3D G3DSA:3.50.50.60 8 341 1.1E-101 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0806 154814d88905bf9dcc946f7c2b624222 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 15-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 THII_0806 154814d88905bf9dcc946f7c2b624222 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 394 2.9E-132 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 THII_0806 154814d88905bf9dcc946f7c2b624222 409 Pfam PF01494 FAD binding domain 8 318 1.6E-30 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 THII_0806 154814d88905bf9dcc946f7c2b624222 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 8.3E-17 T 15-10-2018 THII_0806 154814d88905bf9dcc946f7c2b624222 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 8.3E-17 T 15-10-2018 THII_0806 154814d88905bf9dcc946f7c2b624222 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 8.3E-17 T 15-10-2018 THII_0806 154814d88905bf9dcc946f7c2b624222 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 8.3E-17 T 15-10-2018 THII_0806 154814d88905bf9dcc946f7c2b624222 409 SUPERFAMILY SSF51905 7 400 5.01E-56 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3956 3e57c6ed3529b05a1d1e5a8abfd717ad 230 SUPERFAMILY SSF53098 24 216 5.23E-6 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_2529 175f543e61b517441cab5130aa127dee 307 Gene3D G3DSA:1.10.8.300 200 306 3.0E-25 T 15-10-2018 THII_2529 175f543e61b517441cab5130aa127dee 307 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 39 169 1.2E-63 T 15-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 THII_2529 175f543e61b517441cab5130aa127dee 307 PIRSF PIRSF002849 1 307 8.9E-124 T 15-10-2018 THII_2529 175f543e61b517441cab5130aa127dee 307 SUPERFAMILY SSF52540 8 283 5.76E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2529 175f543e61b517441cab5130aa127dee 307 Gene3D G3DSA:3.40.50.300 20 185 1.1E-42 T 15-10-2018 THII_0588 2638796883e038e37abf64e117e44651 292 Gene3D G3DSA:3.40.190.100 116 223 2.3E-105 T 15-10-2018 THII_0588 2638796883e038e37abf64e117e44651 292 Gene3D G3DSA:3.40.190.10 36 288 2.3E-105 T 15-10-2018 THII_0588 2638796883e038e37abf64e117e44651 292 SUPERFAMILY SSF53850 31 289 4.4E-84 T 15-10-2018 THII_0588 2638796883e038e37abf64e117e44651 292 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 279 3.4E-69 T 15-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 THII_3623 d3dad0c35ee263abd0341e17da4cc3ad 282 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 23 282 36.527 T 15-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 THII_3623 d3dad0c35ee263abd0341e17da4cc3ad 282 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 76 94 - T 15-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 THII_3623 d3dad0c35ee263abd0341e17da4cc3ad 282 Pfam PF00218 Indole-3-glycerol phosphate synthase 25 278 2.3E-97 T 15-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 THII_3623 d3dad0c35ee263abd0341e17da4cc3ad 282 Gene3D G3DSA:3.20.20.70 17 282 1.6E-108 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3623 d3dad0c35ee263abd0341e17da4cc3ad 282 SUPERFAMILY SSF51366 32 281 7.18E-91 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 THII_2624 82ed716355832d9606bf6884b5f03db6 888 SMART SM00912 14 137 1.5E-12 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_2624 82ed716355832d9606bf6884b5f03db6 888 Gene3D G3DSA:2.160.20.10 23 445 4.1E-55 T 15-10-2018 IPR012334 Pectin lyase fold THII_2624 82ed716355832d9606bf6884b5f03db6 888 SUPERFAMILY SSF51126 369 501 5.65E-10 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_2624 82ed716355832d9606bf6884b5f03db6 888 SUPERFAMILY SSF51126 34 368 1.88E-40 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_2624 82ed716355832d9606bf6884b5f03db6 888 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 54 131 1.6E-18 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_2624 82ed716355832d9606bf6884b5f03db6 888 SUPERFAMILY SSF51126 578 738 4.24E-6 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_2624 82ed716355832d9606bf6884b5f03db6 888 Pfam PF05860 haemagglutination activity domain 21 132 5.0E-22 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 SUPERFAMILY SSF50677 226 413 1.99E-52 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 Gene3D G3DSA:1.10.730.10 595 749 2.0E-50 T 15-10-2018 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 Pfam PF08264 Anticodon-binding domain of tRNA 653 775 2.5E-19 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.5E-54 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 7.5E-54 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.5E-54 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.5E-54 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 7.5E-54 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 7.5E-54 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.5E-54 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 812 0.0 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 402 1.6E-74 T 15-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 Gene3D G3DSA:3.90.740.10 228 413 1.6E-266 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 SUPERFAMILY SSF52374 4 622 1.86E-150 T 15-10-2018 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 Gene3D G3DSA:3.40.50.620 34 570 1.6E-266 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 415 613 3.5E-23 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 4.1E-28 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 SUPERFAMILY SSF47323 617 812 2.24E-39 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 Gene3D G3DSA:3.10.20.590 751 813 1.6E-20 T 15-10-2018 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 Gene3D G3DSA:2.30.210.10 571 583 1.6E-266 T 15-10-2018 THII_1852 020acc8d2b2d54a93cbfaa66485565fe 813 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 812 23.64 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 THII_2755 942123ecbbebd3d9adeebc078d68ae92 153 Pfam PF01029 NusB family 17 140 2.2E-33 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 THII_2755 942123ecbbebd3d9adeebc078d68ae92 153 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 13 144 21.083 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 THII_2755 942123ecbbebd3d9adeebc078d68ae92 153 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 15 141 1.8E-42 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 THII_2755 942123ecbbebd3d9adeebc078d68ae92 153 Gene3D G3DSA:1.10.940.10 9 148 1.2E-45 T 15-10-2018 IPR035926 NusB-like superfamily THII_2755 942123ecbbebd3d9adeebc078d68ae92 153 SUPERFAMILY SSF48013 13 141 4.58E-41 T 15-10-2018 IPR035926 NusB-like superfamily THII_0491 b764883dac7093dd5f70b2107ca1238e 231 Pfam PF02630 SCO1/SenC 59 193 9.4E-37 T 15-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0491 b764883dac7093dd5f70b2107ca1238e 231 SUPERFAMILY SSF52833 55 218 5.61E-46 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_0491 b764883dac7093dd5f70b2107ca1238e 231 Gene3D G3DSA:3.40.30.10 49 219 4.6E-49 T 15-10-2018 THII_1249 a624d6a4a4dabb4263d188687098e7e7 508 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 44 57 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 THII_1249 a624d6a4a4dabb4263d188687098e7e7 508 SUPERFAMILY SSF55021 412 505 2.52E-27 T 15-10-2018 THII_1249 a624d6a4a4dabb4263d188687098e7e7 508 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 7 505 3.9E-247 T 15-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 THII_1249 a624d6a4a4dabb4263d188687098e7e7 508 SUPERFAMILY SSF53686 7 355 1.11E-102 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THII_1249 a624d6a4a4dabb4263d188687098e7e7 508 Gene3D G3DSA:3.40.50.1100 52 148 6.4E-137 T 15-10-2018 THII_1249 a624d6a4a4dabb4263d188687098e7e7 508 Gene3D G3DSA:3.40.1020.10 330 506 8.3E-73 T 15-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 THII_1249 a624d6a4a4dabb4263d188687098e7e7 508 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 308 3.4E-80 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme THII_1249 a624d6a4a4dabb4263d188687098e7e7 508 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 321 411 3.6E-24 T 15-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 THII_1249 a624d6a4a4dabb4263d188687098e7e7 508 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 423 505 1.9E-25 T 15-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 THII_1249 a624d6a4a4dabb4263d188687098e7e7 508 Gene3D G3DSA:3.40.50.1100 16 319 6.4E-137 T 15-10-2018 THII_3789 f7639ae527cc666077da4414f32ab8c5 248 Gene3D G3DSA:1.25.40.10 1 228 1.0E-39 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3789 f7639ae527cc666077da4414f32ab8c5 248 SUPERFAMILY SSF48452 11 216 6.5E-34 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3789 f7639ae527cc666077da4414f32ab8c5 248 SMART SM00028 186 219 24.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3789 f7639ae527cc666077da4414f32ab8c5 248 SMART SM00028 44 77 7.7E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3789 f7639ae527cc666077da4414f32ab8c5 248 SMART SM00028 78 111 0.25 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3789 f7639ae527cc666077da4414f32ab8c5 248 SMART SM00028 113 146 10.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3789 f7639ae527cc666077da4414f32ab8c5 248 SMART SM00028 10 43 6.1E-7 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3789 f7639ae527cc666077da4414f32ab8c5 248 Pfam PF13432 Tetratricopeptide repeat 16 71 2.4E-8 T 15-10-2018 THII_3510 086978a596f80cd7780b9c748191f9f8 280 Gene3D G3DSA:3.20.10.10 118 278 1.6E-53 T 15-10-2018 THII_3510 086978a596f80cd7780b9c748191f9f8 280 Gene3D G3DSA:3.30.470.10 1 116 1.4E-39 T 15-10-2018 THII_3510 086978a596f80cd7780b9c748191f9f8 280 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 3 271 2.4E-83 T 15-10-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 THII_3510 086978a596f80cd7780b9c748191f9f8 280 Pfam PF01063 Amino-transferase class IV 29 246 1.0E-47 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 THII_3510 086978a596f80cd7780b9c748191f9f8 280 SUPERFAMILY SSF56752 1 272 1.57E-80 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 THII_0557 c503b9620e8304efb41417ece0d826eb 61 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 2 52 6.2E-16 T 15-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 THII_0557 c503b9620e8304efb41417ece0d826eb 61 SUPERFAMILY SSF54786 2 59 2.0E-16 T 15-10-2018 THII_0557 c503b9620e8304efb41417ece0d826eb 61 Gene3D G3DSA:3.30.920.30 1 60 2.4E-20 T 15-10-2018 IPR038570 HicA superfamily THII_1319 4176144cd00bd835076d6510b527314e 600 Pfam PF04348 LppC putative lipoprotein 56 593 7.2E-109 T 15-10-2018 IPR007443 Penicillin-binding protein activator LpoA THII_1319 4176144cd00bd835076d6510b527314e 600 Gene3D G3DSA:1.25.40.650 162 266 1.3E-11 T 15-10-2018 THII_1319 4176144cd00bd835076d6510b527314e 600 Gene3D G3DSA:3.40.50.2300 276 586 9.7E-88 T 15-10-2018 THII_1319 4176144cd00bd835076d6510b527314e 600 Gene3D G3DSA:3.40.50.2300 380 587 9.7E-88 T 15-10-2018 THII_1319 4176144cd00bd835076d6510b527314e 600 Gene3D G3DSA:1.25.40.10 36 160 1.4E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1319 4176144cd00bd835076d6510b527314e 600 SUPERFAMILY SSF53822 273 595 5.1E-65 T 15-10-2018 IPR028082 Periplasmic binding protein-like I THII_2662 fe31f240e8366de0419061ec2d65b2b0 135 Pfam PF01850 PIN domain 3 123 6.6E-12 T 15-10-2018 IPR002716 PIN domain THII_2662 fe31f240e8366de0419061ec2d65b2b0 135 SUPERFAMILY SSF88723 2 132 1.49E-33 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2662 fe31f240e8366de0419061ec2d65b2b0 135 Gene3D G3DSA:3.40.50.1010 1 132 3.8E-30 T 15-10-2018 THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.2E-30 T 15-10-2018 IPR032305 GTP-binding protein, middle domain THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 Pfam PF13167 GTP-binding GTPase N-terminal 26 112 3.9E-30 T 15-10-2018 IPR025121 GTPase HflX, N-terminal THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 SUPERFAMILY SSF54980 363 419 2.81E-8 T 15-10-2018 IPR035647 EF-G domain III/V-like THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 Gene3D G3DSA:3.40.50.300 197 368 2.2E-39 T 15-10-2018 THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 Hamap MF_00900 GTPase HflX [hflX]. 27 389 46.998 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 SUPERFAMILY SSF52540 198 367 1.08E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 Gene3D G3DSA:3.40.50.11060 20 138 3.7E-36 T 15-10-2018 THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.3E-21 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 PIRSF PIRSF006809 3 417 7.6E-147 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 2.7E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.7E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.7E-10 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 198 352 8.5E-12 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_2391 b8fd12fdd1f629f564ff0703d7fd632e 433 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 358 1.4E-150 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 THII_3308 4a34a55f6e147dad73b49b4711710463 161 SUPERFAMILY SSF55729 6 133 6.52E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_3308 4a34a55f6e147dad73b49b4711710463 161 Pfam PF00583 Acetyltransferase (GNAT) family 42 125 4.3E-11 T 15-10-2018 IPR000182 GNAT domain THII_3308 4a34a55f6e147dad73b49b4711710463 161 Gene3D G3DSA:3.40.630.30 9 143 1.8E-19 T 15-10-2018 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Gene3D G3DSA:3.90.199.10 33 519 6.6E-220 T 15-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Gene3D G3DSA:2.120.10.90 529 838 1.2E-127 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Gene3D G3DSA:3.30.1360.40 236 331 6.6E-220 T 15-10-2018 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 SUPERFAMILY SSF101904 531 843 4.19E-109 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 837 0.0 T 15-10-2018 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 SMART SM00434 11 497 4.3E-278 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 SUPERFAMILY SSF56719 30 520 3.53E-175 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Gene3D G3DSA:1.10.268.10 368 491 6.6E-220 T 15-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 500 1.2E-151 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 1.6E-7 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 586 635 8.5E-10 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 791 837 2.7E-12 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 787 2.2E-13 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 1.4E-12 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 536 582 4.3E-8 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 THII_0603 3a7518089c5489a668c905d8b4bb4a54 845 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 5 839 24.099 T 15-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 THII_1881 d27af1b8185131871c6aeb3aab7e7f3f 201 Pfam PF01871 AMMECR1 16 186 1.0E-46 T 15-10-2018 IPR002733 AMMECR1 domain THII_1881 d27af1b8185131871c6aeb3aab7e7f3f 201 Gene3D G3DSA:3.30.700.20 12 189 2.1E-50 T 15-10-2018 IPR027485 AMMECR1, N-terminal THII_1881 d27af1b8185131871c6aeb3aab7e7f3f 201 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 13 186 8.0E-61 T 15-10-2018 IPR027623 AmmeMemoRadiSam system protein A THII_1881 d27af1b8185131871c6aeb3aab7e7f3f 201 SUPERFAMILY SSF143447 3 191 2.22E-55 T 15-10-2018 IPR036071 AMMECR1 domain superfamily THII_1881 d27af1b8185131871c6aeb3aab7e7f3f 201 Gene3D G3DSA:3.30.1490.150 115 187 2.1E-50 T 15-10-2018 THII_1881 d27af1b8185131871c6aeb3aab7e7f3f 201 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 5 193 4.1E-32 T 15-10-2018 IPR023473 AMMECR1 THII_1950 55d35ce734c27177908eefc8b2271fba 330 Gene3D G3DSA:3.40.190.10 21 112 3.5E-7 T 15-10-2018 THII_1950 55d35ce734c27177908eefc8b2271fba 330 Gene3D G3DSA:3.40.190.10 126 323 9.4E-19 T 15-10-2018 THII_1950 55d35ce734c27177908eefc8b2271fba 330 SUPERFAMILY SSF53850 25 239 3.37E-24 T 15-10-2018 THII_1950 55d35ce734c27177908eefc8b2271fba 330 Pfam PF09084 NMT1/THI5 like 37 237 1.3E-13 T 15-10-2018 IPR015168 SsuA/THI5-like THII_0981 2ccaa54e26d78f1b43ffe2e053048b51 86 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 1.5E-16 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_0981 2ccaa54e26d78f1b43ffe2e053048b51 86 SUPERFAMILY SSF143120 1 75 9.59E-19 T 15-10-2018 IPR036165 YefM-like superfamily THII_0981 2ccaa54e26d78f1b43ffe2e053048b51 86 Gene3D G3DSA:1.10.1220.170 41 86 1.4E-15 T 15-10-2018 THII_0981 2ccaa54e26d78f1b43ffe2e053048b51 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 56 5.4E-8 T 15-10-2018 THII_0981 2ccaa54e26d78f1b43ffe2e053048b51 86 Gene3D G3DSA:3.40.1620.10 1 40 3.1E-11 T 15-10-2018 THII_2032 763265f69db016405e109c40283ad5f1 119 Gene3D G3DSA:2.30.30.110 1 119 1.8E-25 T 15-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor THII_2032 763265f69db016405e109c40283ad5f1 119 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 115 5.7E-20 T 15-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 THII_2032 763265f69db016405e109c40283ad5f1 119 SUPERFAMILY SSF50118 4 118 2.62E-23 T 15-10-2018 THII_1388 741dce49122e03ea005fce4dfc9a8787 161 SUPERFAMILY SSF52821 9 129 5.24E-29 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily THII_1388 741dce49122e03ea005fce4dfc9a8787 161 Gene3D G3DSA:3.40.250.10 1 130 1.1E-26 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily THII_1388 741dce49122e03ea005fce4dfc9a8787 161 Pfam PF00581 Rhodanese-like domain 27 119 2.9E-14 T 15-10-2018 IPR001763 Rhodanese-like domain THII_1388 741dce49122e03ea005fce4dfc9a8787 161 SMART SM00450 19 124 3.9E-22 T 15-10-2018 IPR001763 Rhodanese-like domain THII_1513 75509301d6ed8a505d045db905a0b057 234 Gene3D G3DSA:3.40.50.1000 4 218 6.1E-67 T 15-10-2018 IPR023214 HAD superfamily THII_1513 75509301d6ed8a505d045db905a0b057 234 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 191 5.3E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_1513 75509301d6ed8a505d045db905a0b057 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 186 199 4.7E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_1513 75509301d6ed8a505d045db905a0b057 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 4.7E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_1513 75509301d6ed8a505d045db905a0b057 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 4.7E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_1513 75509301d6ed8a505d045db905a0b057 234 Gene3D G3DSA:1.20.120.1600 17 100 6.1E-67 T 15-10-2018 THII_1513 75509301d6ed8a505d045db905a0b057 234 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 197 9.3E-12 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_1513 75509301d6ed8a505d045db905a0b057 234 SUPERFAMILY SSF56784 2 225 5.7E-47 T 15-10-2018 IPR036412 HAD-like superfamily THII_1513 75509301d6ed8a505d045db905a0b057 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 197 1.5E-19 T 15-10-2018 THII_2803 de7cf0885d72d03c74b5677732b73609 380 Pfam PF11890 Domain of unknown function (DUF3410) 289 374 1.5E-17 T 15-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 THII_2803 de7cf0885d72d03c74b5677732b73609 380 Gene3D G3DSA:3.40.50.720 2 274 4.3E-112 T 15-10-2018 THII_2803 de7cf0885d72d03c74b5677732b73609 380 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 360 44.24 T 15-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 THII_2803 de7cf0885d72d03c74b5677732b73609 380 Gene3D G3DSA:3.40.50.720 92 256 4.3E-112 T 15-10-2018 THII_2803 de7cf0885d72d03c74b5677732b73609 380 SUPERFAMILY SSF52283 16 130 2.34E-15 T 15-10-2018 THII_2803 de7cf0885d72d03c74b5677732b73609 380 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 31 278 1.3E-14 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 THII_2803 de7cf0885d72d03c74b5677732b73609 380 SUPERFAMILY SSF51735 95 256 1.67E-31 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2803 de7cf0885d72d03c74b5677732b73609 380 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 255 2.2E-34 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 THII_2803 de7cf0885d72d03c74b5677732b73609 380 Gene3D G3DSA:3.30.1370.170 292 380 1.1E-17 T 15-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 THII_1146 91765af8ba3088545cca5da3c746e498 212 Gene3D G3DSA:1.10.1660.10 6 51 3.0E-8 T 15-10-2018 THII_1146 91765af8ba3088545cca5da3c746e498 212 ProSitePatterns PS00397 Site-specific recombinases active site. 64 72 - T 15-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 THII_1146 91765af8ba3088545cca5da3c746e498 212 Pfam PF00376 MerR family regulatory protein 8 42 2.0E-10 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 THII_1146 91765af8ba3088545cca5da3c746e498 212 Gene3D G3DSA:3.40.50.1390 57 158 1.1E-19 T 15-10-2018 THII_1146 91765af8ba3088545cca5da3c746e498 212 SUPERFAMILY SSF53041 59 191 3.4E-18 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 THII_1146 91765af8ba3088545cca5da3c746e498 212 SMART SM00857 61 199 2.2E-14 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 THII_1146 91765af8ba3088545cca5da3c746e498 212 Pfam PF00239 Resolvase, N terminal domain 62 186 3.6E-16 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 THII_1146 91765af8ba3088545cca5da3c746e498 212 SUPERFAMILY SSF46955 8 85 4.76E-8 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily THII_1835 f83cfe876fc4386185f757d8882dd868 87 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 66 6.4E-12 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_1835 f83cfe876fc4386185f757d8882dd868 87 SUPERFAMILY SSF143120 1 70 9.94E-15 T 15-10-2018 IPR036165 YefM-like superfamily THII_1835 f83cfe876fc4386185f757d8882dd868 87 Gene3D G3DSA:3.40.1620.40 4 67 5.0E-21 T 15-10-2018 THII_3882 2423ceea3c7bea22a459b622438995a5 125 SUPERFAMILY SSF50104 1 119 9.13E-49 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily THII_3882 2423ceea3c7bea22a459b622438995a5 125 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.302 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3882 2423ceea3c7bea22a459b622438995a5 125 Pfam PF01245 Ribosomal protein L19 3 113 1.7E-49 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3882 2423ceea3c7bea22a459b622438995a5 125 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.1E-49 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3882 2423ceea3c7bea22a459b622438995a5 125 Gene3D G3DSA:2.30.30.790 8 116 2.7E-16 T 15-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3882 2423ceea3c7bea22a459b622438995a5 125 PIRSF PIRSF002191 1 125 2.3E-51 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3882 2423ceea3c7bea22a459b622438995a5 125 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 15-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_3882 2423ceea3c7bea22a459b622438995a5 125 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.4E-40 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3882 2423ceea3c7bea22a459b622438995a5 125 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.4E-40 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3882 2423ceea3c7bea22a459b622438995a5 125 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.4E-40 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0334 fb62fd3eaa59a6b67314b3544bec1bb8 147 SUPERFAMILY SSF46626 52 144 1.1E-20 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0334 fb62fd3eaa59a6b67314b3544bec1bb8 147 Gene3D G3DSA:1.10.760.10 2 147 7.4E-43 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0334 fb62fd3eaa59a6b67314b3544bec1bb8 147 Pfam PF00034 Cytochrome c 52 132 1.3E-11 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_3707 99d4a16629e3afdd5c595c74d22843d7 545 SUPERFAMILY SSF52402 175 449 1.44E-20 T 15-10-2018 THII_3707 99d4a16629e3afdd5c595c74d22843d7 545 Gene3D G3DSA:3.40.50.620 180 321 3.0E-15 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3707 99d4a16629e3afdd5c595c74d22843d7 545 SUPERFAMILY SSF56235 48 175 1.74E-9 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_3707 99d4a16629e3afdd5c595c74d22843d7 545 Pfam PF00733 Asparagine synthase 215 497 7.4E-10 T 15-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 THII_3707 99d4a16629e3afdd5c595c74d22843d7 545 Gene3D G3DSA:3.60.20.10 48 177 9.6E-7 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_2493 4ec0431848404a01db874c041cd2fdb7 597 Gene3D G3DSA:2.40.30.10 186 285 8.1E-32 T 15-10-2018 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 Gene3D G3DSA:3.30.70.2570 479 553 3.6E-34 T 15-10-2018 IPR038363 LepA, C-terminal domain superfamily THII_2493 4ec0431848404a01db874c041cd2fdb7 597 SUPERFAMILY SSF54980 292 370 1.29E-18 T 15-10-2018 IPR035647 EF-G domain III/V-like THII_2493 4ec0431848404a01db874c041cd2fdb7 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 296.546 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 174 1.9E-17 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.4E-10 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 Gene3D G3DSA:3.40.50.300 1 185 2.6E-70 T 15-10-2018 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 2.3E-50 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 Gene3D G3DSA:3.30.70.870 286 367 2.8E-35 T 15-10-2018 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 SUPERFAMILY SSF54980 400 493 2.25E-22 T 15-10-2018 IPR035647 EF-G domain III/V-like THII_2493 4ec0431848404a01db874c041cd2fdb7 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 2.3E-50 T 15-10-2018 IPR013842 GTP-binding protein LepA, C-terminal THII_2493 4ec0431848404a01db874c041cd2fdb7 597 TIGRFAM TIGR01393 lepA: elongation factor 4 3 594 3.3E-294 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 SUPERFAMILY SSF50447 165 288 2.08E-30 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_2493 4ec0431848404a01db874c041cd2fdb7 597 SUPERFAMILY SSF52540 2 205 1.16E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2493 4ec0431848404a01db874c041cd2fdb7 597 Gene3D G3DSA:3.30.70.3380 368 478 8.3E-38 T 15-10-2018 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 8.6E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 8.6E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 8.6E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 8.6E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 8.6E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2493 4ec0431848404a01db874c041cd2fdb7 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site THII_2493 4ec0431848404a01db874c041cd2fdb7 597 Pfam PF00679 Elongation factor G C-terminus 399 484 4.3E-18 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like THII_1346 927eb695ad99f8a033d4714d01777abf 291 Gene3D G3DSA:3.90.550.10 1 291 1.1E-82 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1346 927eb695ad99f8a033d4714d01777abf 291 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.3E-151 T 15-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 THII_1346 927eb695ad99f8a033d4714d01777abf 291 SUPERFAMILY SSF53448 1 287 4.98E-90 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1346 927eb695ad99f8a033d4714d01777abf 291 Pfam PF00483 Nucleotidyl transferase 2 238 1.5E-67 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 THII_1914 1b287dc73dc00452858b5df145a3abe8 308 Pfam PF00850 Histone deacetylase domain 20 304 2.3E-81 T 15-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 THII_1914 1b287dc73dc00452858b5df145a3abe8 308 Gene3D G3DSA:3.40.800.20 1 307 5.5E-117 T 15-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 THII_1914 1b287dc73dc00452858b5df145a3abe8 308 SUPERFAMILY SSF52768 1 306 2.21E-101 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily THII_1914 1b287dc73dc00452858b5df145a3abe8 308 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 4.8E-17 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 THII_1914 1b287dc73dc00452858b5df145a3abe8 308 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 4.8E-17 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 THII_1914 1b287dc73dc00452858b5df145a3abe8 308 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 4.8E-17 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 THII_3421 75a88b01cce2c6f373d7f455226980ee 362 Gene3D G3DSA:1.20.1090.10 171 359 6.6E-67 T 15-10-2018 THII_3421 75a88b01cce2c6f373d7f455226980ee 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 347 5.5E-120 T 15-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 THII_3421 75a88b01cce2c6f373d7f455226980ee 362 PIRSF PIRSF001455 3 356 2.7E-110 T 15-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 THII_3421 75a88b01cce2c6f373d7f455226980ee 362 Pfam PF01761 3-dehydroquinate synthase 65 323 1.1E-111 T 15-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 THII_3421 75a88b01cce2c6f373d7f455226980ee 362 Gene3D G3DSA:3.40.50.1970 1 170 3.4E-68 T 15-10-2018 THII_3421 75a88b01cce2c6f373d7f455226980ee 362 SUPERFAMILY SSF56796 3 354 9.29E-116 T 15-10-2018 THII_3421 75a88b01cce2c6f373d7f455226980ee 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 70.125 T 15-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 THII_3473 b0c0018d08efe47640b321277214bdb1 142 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 19 141 29.546 T 15-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 THII_3473 b0c0018d08efe47640b321277214bdb1 142 SUPERFAMILY SSF57716 102 140 4.13E-10 T 15-10-2018 THII_3473 b0c0018d08efe47640b321277214bdb1 142 Gene3D G3DSA:1.20.120.910 10 141 3.0E-38 T 15-10-2018 THII_3473 b0c0018d08efe47640b321277214bdb1 142 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 23 132 3.7E-49 T 15-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 THII_3473 b0c0018d08efe47640b321277214bdb1 142 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 100 134 5.5E-12 T 15-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 THII_3473 b0c0018d08efe47640b321277214bdb1 142 SUPERFAMILY SSF109635 7 100 2.48E-35 T 15-10-2018 IPR037187 DksA, N-terminal domain superfamily THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PIRSF PIRSF000350 1 454 7.9E-54 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 445 8.4E-16 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 Gene3D G3DSA:3.50.50.60 6 322 1.2E-74 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 Gene3D G3DSA:3.30.390.30 338 455 3.5E-32 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 SUPERFAMILY SSF55424 339 450 1.08E-18 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 316 6.0E-40 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 Gene3D G3DSA:3.50.50.60 144 261 1.2E-74 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 Gene3D G3DSA:1.10.287.990 36 106 1.2E-74 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 4.0E-18 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 4.0E-18 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.0E-18 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 4.0E-18 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 4.0E-18 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 SUPERFAMILY SSF51905 1 328 2.11E-35 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 2.1E-37 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 2.1E-37 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 2.1E-37 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 440 2.1E-37 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 2.1E-37 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.1E-37 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.1E-37 T 15-10-2018 THII_3258 c032c1bd9cf403ad08cf12cf22d43fbc 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 2.1E-37 T 15-10-2018 THII_3724 ac1dab403efb0f3f69037de9c370f025 349 SUPERFAMILY SSF51395 5 337 8.79E-100 T 15-10-2018 THII_3724 ac1dab403efb0f3f69037de9c370f025 349 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 339 49.818 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 THII_3724 ac1dab403efb0f3f69037de9c370f025 349 Gene3D G3DSA:3.20.20.70 5 338 9.7E-132 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3724 ac1dab403efb0f3f69037de9c370f025 349 PIRSF PIRSF000164 21 346 7.2E-95 T 15-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 THII_3724 ac1dab403efb0f3f69037de9c370f025 349 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 295 315 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 THII_3724 ac1dab403efb0f3f69037de9c370f025 349 Pfam PF01180 Dihydroorotate dehydrogenase 51 336 4.8E-89 T 15-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 THII_3724 ac1dab403efb0f3f69037de9c370f025 349 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 338 1.4E-125 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 THII_3724 ac1dab403efb0f3f69037de9c370f025 349 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 83 102 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 THII_3861 a7454f57ad789f7edbca4eac5a65a781 220 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 114 142 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 THII_3861 a7454f57ad789f7edbca4eac5a65a781 220 Gene3D G3DSA:1.10.530.10 89 219 2.1E-43 T 15-10-2018 THII_3861 a7454f57ad789f7edbca4eac5a65a781 220 SUPERFAMILY SSF53955 89 214 2.44E-44 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_3861 a7454f57ad789f7edbca4eac5a65a781 220 Pfam PF01464 Transglycosylase SLT domain 96 192 7.9E-30 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 THII_0066 cef9de31ea49a7a53015588a06ee1b84 143 Pfam PF01880 Desulfoferrodoxin 50 139 2.9E-8 T 15-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 THII_0066 cef9de31ea49a7a53015588a06ee1b84 143 Gene3D G3DSA:2.60.40.730 30 140 2.2E-13 T 15-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 THII_0066 cef9de31ea49a7a53015588a06ee1b84 143 SUPERFAMILY SSF49367 42 143 6.15E-11 T 15-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 THII_2262 30d5864dae53aa9ba6fbace70b88fb60 401 Gene3D G3DSA:1.20.81.30 52 169 7.6E-24 T 15-10-2018 THII_2262 30d5864dae53aa9ba6fbace70b88fb60 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 365 379 6.9E-18 T 15-10-2018 IPR003004 GspF/PilC family THII_2262 30d5864dae53aa9ba6fbace70b88fb60 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 63 75 6.9E-18 T 15-10-2018 IPR003004 GspF/PilC family THII_2262 30d5864dae53aa9ba6fbace70b88fb60 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 381 400 6.9E-18 T 15-10-2018 IPR003004 GspF/PilC family THII_2262 30d5864dae53aa9ba6fbace70b88fb60 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 162 190 6.9E-18 T 15-10-2018 IPR003004 GspF/PilC family THII_2262 30d5864dae53aa9ba6fbace70b88fb60 401 Gene3D G3DSA:1.20.81.30 254 364 2.3E-23 T 15-10-2018 THII_2262 30d5864dae53aa9ba6fbace70b88fb60 401 Pfam PF00482 Type II secretion system (T2SS), protein F 68 190 1.4E-24 T 15-10-2018 IPR018076 Type II secretion system F domain THII_2262 30d5864dae53aa9ba6fbace70b88fb60 401 Pfam PF00482 Type II secretion system (T2SS), protein F 270 390 7.0E-25 T 15-10-2018 IPR018076 Type II secretion system F domain THII_2133 0cbadba0e14c65d29e835b1358a0b65d 453 SUPERFAMILY SSF51905 14 404 6.88E-27 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2133 0cbadba0e14c65d29e835b1358a0b65d 453 Gene3D G3DSA:3.50.50.60 12 397 5.9E-25 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 SUPERFAMILY SSF142019 5 240 1.44E-81 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 168 183 - T 15-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 48 220 3.1E-43 T 15-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 SUPERFAMILY SSF140490 326 421 9.68E-37 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 SMART SM00928 330 375 1.0E-23 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 Gene3D G3DSA:3.10.20.600 233 327 5.0E-37 T 15-10-2018 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 343 354 - T 15-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 SUPERFAMILY SSF142984 242 325 8.63E-28 T 15-10-2018 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 7 416 5.0E-196 T 15-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 332 413 4.6E-31 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 Gene3D G3DSA:1.20.1440.230 328 423 4.3E-34 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 Gene3D G3DSA:3.40.50.11540 52 232 1.5E-78 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0527 84b536ee8d21dc3a284386b3c0ce0c6d 423 Pfam PF10531 SLBB domain 244 292 2.0E-15 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_3533 7759940eccb459b16e364a10c12ff659 226 Pfam PF04298 Putative neutral zinc metallopeptidase 2 224 3.9E-64 T 15-10-2018 IPR007395 Putative neutral zinc metallopeptidase THII_1689 4ddb32c8d581e74ca4cf0c9914c6a09f 401 Pfam PF00092 von Willebrand factor type A domain 29 199 5.2E-17 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_1689 4ddb32c8d581e74ca4cf0c9914c6a09f 401 SMART SM00327 27 206 6.4E-21 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_1689 4ddb32c8d581e74ca4cf0c9914c6a09f 401 Gene3D G3DSA:3.40.50.410 29 205 2.0E-32 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_1689 4ddb32c8d581e74ca4cf0c9914c6a09f 401 SUPERFAMILY SSF53300 27 206 1.48E-32 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Gene3D G3DSA:1.25.10.10 137 293 2.0E-29 T 15-10-2018 IPR011989 Armadillo-like helical THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Gene3D G3DSA:1.25.10.10 536 689 7.7E-35 T 15-10-2018 IPR011989 Armadillo-like helical THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Pfam PF03130 PBS lyase HEAT-like repeat 458 481 0.0016 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SUPERFAMILY SSF48371 148 351 7.33E-31 T 15-10-2018 IPR016024 Armadillo-type fold THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SUPERFAMILY SSF48371 444 903 1.76E-40 T 15-10-2018 IPR016024 Armadillo-type fold THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Gene3D G3DSA:3.30.450.20 6 125 1.8E-16 T 15-10-2018 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SUPERFAMILY SSF55785 9 129 1.9E-8 T 15-10-2018 IPR035965 PAS domain superfamily THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Pfam PF13646 HEAT repeats 599 685 1.8E-15 T 15-10-2018 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Pfam PF13646 HEAT repeats 724 801 4.6E-10 T 15-10-2018 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Pfam PF13646 HEAT repeats 818 898 3.1E-10 T 15-10-2018 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Pfam PF13646 HEAT repeats 211 280 2.5E-12 T 15-10-2018 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Pfam PF13646 HEAT repeats 506 589 1.1E-16 T 15-10-2018 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Gene3D G3DSA:1.25.10.10 294 364 4.0E-7 T 15-10-2018 IPR011989 Armadillo-like helical THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Gene3D G3DSA:1.25.10.10 372 535 9.1E-24 T 15-10-2018 IPR011989 Armadillo-like helical THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Gene3D G3DSA:1.25.10.10 763 905 4.2E-16 T 15-10-2018 IPR011989 Armadillo-like helical THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 Gene3D G3DSA:1.25.10.110 690 762 3.7E-7 T 15-10-2018 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 797 826 800.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 610 639 0.1 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 517 546 28.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 674 703 32.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 859 888 150.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 486 515 130.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 736 765 40.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 455 484 0.0054 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 253 282 1.5 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 642 671 0.0089 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 314 343 62.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 828 857 0.21 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 284 313 110.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 548 577 850.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 222 251 0.0011 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 705 734 8.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 159 188 340.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 579 608 28.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00567 E-Z type HEAT repeats 425 453 500.0 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00185 228 268 84.0 T 15-10-2018 IPR000225 Armadillo GO:0005515 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00185 290 329 180.0 T 15-10-2018 IPR000225 Armadillo GO:0005515 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00185 492 532 19.0 T 15-10-2018 IPR000225 Armadillo GO:0005515 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00185 428 470 510.0 T 15-10-2018 IPR000225 Armadillo GO:0005515 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00185 162 207 75.0 T 15-10-2018 IPR000225 Armadillo GO:0005515 THII_0551 f6e34928fa0e813fae3f3584d0f3d984 907 SMART SM00185 680 720 93.0 T 15-10-2018 IPR000225 Armadillo GO:0005515 THII_0854 c76cfa789817e277cb1ead114666580b 713 Pfam PF00263 Bacterial type II and III secretion system protein 510 678 6.1E-45 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 THII_0854 c76cfa789817e277cb1ead114666580b 713 Gene3D G3DSA:3.30.1370.120 373 442 4.7E-6 T 15-10-2018 IPR038591 NolW-like superfamily THII_0854 c76cfa789817e277cb1ead114666580b 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 505 529 5.3E-20 T 15-10-2018 IPR001775 GspD/PilQ family THII_0854 c76cfa789817e277cb1ead114666580b 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 642 660 5.3E-20 T 15-10-2018 IPR001775 GspD/PilQ family THII_0854 c76cfa789817e277cb1ead114666580b 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 444 454 5.3E-20 T 15-10-2018 IPR001775 GspD/PilQ family THII_0854 c76cfa789817e277cb1ead114666580b 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 540 550 5.3E-20 T 15-10-2018 IPR001775 GspD/PilQ family THII_0854 c76cfa789817e277cb1ead114666580b 713 PRINTS PR00811 Bacterial general secretion pathway protein D signature 665 679 5.3E-20 T 15-10-2018 IPR001775 GspD/PilQ family THII_0854 c76cfa789817e277cb1ead114666580b 713 Gene3D G3DSA:3.30.1370.120 114 280 9.4E-11 T 15-10-2018 IPR038591 NolW-like superfamily THII_0854 c76cfa789817e277cb1ead114666580b 713 Pfam PF03958 Bacterial type II/III secretion system short domain 376 444 3.6E-7 T 15-10-2018 IPR005644 NolW-like THII_3059 f2072b69d78289701f65313a585b4ceb 360 Pfam PF00266 Aminotransferase class-V 4 348 2.9E-59 T 15-10-2018 IPR000192 Aminotransferase class V domain THII_3059 f2072b69d78289701f65313a585b4ceb 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THII_3059 f2072b69d78289701f65313a585b4ceb 360 SUPERFAMILY SSF53383 1 358 1.96E-121 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_3059 f2072b69d78289701f65313a585b4ceb 360 Gene3D G3DSA:3.90.1150.10 257 360 2.5E-41 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_3059 f2072b69d78289701f65313a585b4ceb 360 Gene3D G3DSA:3.40.640.10 17 256 2.6E-92 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_3059 f2072b69d78289701f65313a585b4ceb 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 52.024 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 THII_3059 f2072b69d78289701f65313a585b4ceb 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 1.5E-159 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 THII_3059 f2072b69d78289701f65313a585b4ceb 360 PIRSF PIRSF000525 1 360 8.6E-157 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 THII_3363 d678e90ced6aa1e1d9a2f93cdbf312ee 145 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 THII_3363 d678e90ced6aa1e1d9a2f93cdbf312ee 145 Gene3D G3DSA:3.40.140.10 1 145 1.4E-58 T 15-10-2018 THII_3363 d678e90ced6aa1e1d9a2f93cdbf312ee 145 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 142 46.908 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 THII_3363 d678e90ced6aa1e1d9a2f93cdbf312ee 145 Pfam PF14437 MafB19-like deaminase 1 141 7.9E-31 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 THII_3363 d678e90ced6aa1e1d9a2f93cdbf312ee 145 SUPERFAMILY SSF53927 1 142 3.68E-52 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 THII_1598 3f97a9026524d433ef8e7bbe91819f07 181 Pfam PF00227 Proteasome subunit 5 175 1.9E-23 T 15-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 THII_1598 3f97a9026524d433ef8e7bbe91819f07 181 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 42.073 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 THII_1598 3f97a9026524d433ef8e7bbe91819f07 181 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 1.5E-87 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 THII_1598 3f97a9026524d433ef8e7bbe91819f07 181 SUPERFAMILY SSF56235 3 177 2.44E-59 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_1598 3f97a9026524d433ef8e7bbe91819f07 181 PIRSF PIRSF039093 1 180 1.0E-90 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 THII_1598 3f97a9026524d433ef8e7bbe91819f07 181 Gene3D G3DSA:3.60.20.10 2 178 7.9E-69 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_1837 42ffa600038f854ba9752d463c0a61c5 344 SUPERFAMILY SSF111337 5 338 1.7E-129 T 15-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 THII_1837 42ffa600038f854ba9752d463c0a61c5 344 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 339 45.561 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 THII_1837 42ffa600038f854ba9752d463c0a61c5 344 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 338 4.1E-129 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 THII_1837 42ffa600038f854ba9752d463c0a61c5 344 Gene3D G3DSA:3.40.1780.10 14 338 1.1E-115 T 15-10-2018 THII_1837 42ffa600038f854ba9752d463c0a61c5 344 Pfam PF02547 Queuosine biosynthesis protein 4 338 1.9E-129 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 THII_1837 42ffa600038f854ba9752d463c0a61c5 344 Gene3D G3DSA:2.40.10.240 64 161 1.1E-115 T 15-10-2018 THII_0592 80ff7fe709d89ee388287aec0ac74635 599 SUPERFAMILY SSF52096 302 547 4.98E-33 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_0592 80ff7fe709d89ee388287aec0ac74635 599 Pfam PF00378 Enoyl-CoA hydratase/isomerase 346 525 5.6E-21 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 THII_0592 80ff7fe709d89ee388287aec0ac74635 599 SUPERFAMILY SSF50486 175 257 2.55E-7 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 THII_0592 80ff7fe709d89ee388287aec0ac74635 599 Gene3D G3DSA:3.40.50.12230 14 274 7.2E-23 T 15-10-2018 THII_0592 80ff7fe709d89ee388287aec0ac74635 599 Gene3D G3DSA:3.90.226.10 304 552 2.5E-29 T 15-10-2018 THII_0592 80ff7fe709d89ee388287aec0ac74635 599 Pfam PF02911 Formyl transferase, C-terminal domain 175 258 5.3E-7 T 15-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_0592 80ff7fe709d89ee388287aec0ac74635 599 PIRSF PIRSF006787 1 591 2.8E-221 T 15-10-2018 IPR009188 [NiFe]-hydrogenase maturation factor, HypX/HoxX type THII_0592 80ff7fe709d89ee388287aec0ac74635 599 SUPERFAMILY SSF53328 11 156 1.83E-23 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_0592 80ff7fe709d89ee388287aec0ac74635 599 Pfam PF00551 Formyl transferase 34 115 9.7E-6 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_3030 ca11e2f661c4cbb3634427e14d375f45 82 Pfam PF13711 Domain of unknown function (DUF4160) 9 71 2.1E-21 T 15-10-2018 IPR025427 Protein of unknown function DUF4160 THII_0674 0614b24749178fdd94654d311ce1bea3 526 Pfam PF13193 AMP-binding enzyme C-terminal domain 436 512 4.9E-11 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain THII_0674 0614b24749178fdd94654d311ce1bea3 526 SUPERFAMILY SSF56801 4 523 1.26E-126 T 15-10-2018 THII_0674 0614b24749178fdd94654d311ce1bea3 526 Pfam PF00501 AMP-binding enzyme 12 427 8.5E-91 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 THII_0674 0614b24749178fdd94654d311ce1bea3 526 Gene3D G3DSA:3.40.50.12780 2 420 8.0E-96 T 15-10-2018 THII_0674 0614b24749178fdd94654d311ce1bea3 526 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 15-10-2018 IPR020845 AMP-binding, conserved site THII_0674 0614b24749178fdd94654d311ce1bea3 526 Gene3D G3DSA:3.30.300.30 422 523 1.9E-17 T 15-10-2018 THII_1889 91519ce3eac359d2e1135dafe1f04513 378 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 212 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THII_1889 91519ce3eac359d2e1135dafe1f04513 378 SUPERFAMILY SSF53383 12 376 9.35E-107 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_1889 91519ce3eac359d2e1135dafe1f04513 378 Gene3D G3DSA:3.40.640.10 25 273 3.5E-145 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_1889 91519ce3eac359d2e1135dafe1f04513 378 Pfam PF00266 Aminotransferase class-V 16 343 3.3E-40 T 15-10-2018 IPR000192 Aminotransferase class V domain THII_1889 91519ce3eac359d2e1135dafe1f04513 378 PIRSF PIRSF000524 8 378 2.9E-119 T 15-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 THII_1889 91519ce3eac359d2e1135dafe1f04513 378 Gene3D G3DSA:3.90.1150.10 12 372 3.5E-145 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_3514 3c423aea03d84313e09c4bfe2a93b77a 364 Pfam PF01098 Cell cycle protein 16 360 3.1E-109 T 15-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_3514 3c423aea03d84313e09c4bfe2a93b77a 364 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 14 360 7.3E-130 T 15-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_3514 3c423aea03d84313e09c4bfe2a93b77a 364 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 8 362 27.732 T 15-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_3514 3c423aea03d84313e09c4bfe2a93b77a 364 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 317 341 - T 15-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_3485 329e5e1463c3b292d70e4a85b9295974 735 SUPERFAMILY SSF56601 278 630 7.24E-81 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like THII_3485 329e5e1463c3b292d70e4a85b9295974 735 Gene3D G3DSA:1.10.3810.10 56 250 6.4E-45 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_3485 329e5e1463c3b292d70e4a85b9295974 735 Gene3D G3DSA:3.40.710.10 251 624 1.3E-76 T 15-10-2018 THII_3485 329e5e1463c3b292d70e4a85b9295974 735 SUPERFAMILY SSF53955 53 260 9.56E-50 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_3485 329e5e1463c3b292d70e4a85b9295974 735 Pfam PF00905 Penicillin binding protein transpeptidase domain 310 546 1.0E-18 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 THII_3485 329e5e1463c3b292d70e4a85b9295974 735 Pfam PF00912 Transglycosylase 65 219 2.7E-42 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_2102 24af1f122a77eeccdf0924bbbf5c2468 376 Pfam PF07687 Peptidase dimerisation domain 176 279 3.4E-21 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain THII_2102 24af1f122a77eeccdf0924bbbf5c2468 376 Gene3D G3DSA:3.30.70.360 180 293 4.7E-123 T 15-10-2018 THII_2102 24af1f122a77eeccdf0924bbbf5c2468 376 Pfam PF01546 Peptidase family M20/M25/M40 64 372 1.8E-39 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 THII_2102 24af1f122a77eeccdf0924bbbf5c2468 376 Gene3D G3DSA:3.40.630.10 9 363 4.7E-123 T 15-10-2018 THII_2102 24af1f122a77eeccdf0924bbbf5c2468 376 SUPERFAMILY SSF53187 5 375 1.91E-60 T 15-10-2018 THII_2102 24af1f122a77eeccdf0924bbbf5c2468 376 SUPERFAMILY SSF55031 180 288 2.09E-25 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain THII_2102 24af1f122a77eeccdf0924bbbf5c2468 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 376 51.203 T 15-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 THII_2102 24af1f122a77eeccdf0924bbbf5c2468 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 374 5.0E-163 T 15-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 Gene3D G3DSA:3.30.470.20 247 344 3.2E-38 T 15-10-2018 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 451 462 - T 15-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 Gene3D G3DSA:1.20.80.30 112 199 8.0E-92 T 15-10-2018 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 Gene3D G3DSA:3.30.1490.20 11 246 8.0E-92 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 SUPERFAMILY SSF56059 2 381 2.0E-132 T 15-10-2018 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 Gene3D G3DSA:1.10.189.10 348 530 4.2E-74 T 15-10-2018 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 SUPERFAMILY SSF51621 512 915 1.93E-110 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 PIRSF PIRSF000853 2 923 0.0 T 15-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 Gene3D G3DSA:3.50.30.10 386 510 4.2E-74 T 15-10-2018 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 4 916 0.0 T 15-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 Pfam PF00391 PEP-utilising enzyme, mobile domain 423 504 9.6E-26 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 521 915 1.0E-86 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 293 2.2E-41 T 15-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 305 359 5.5E-8 T 15-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 THII_2622 418db67cfa7a4a5ad64be9e7d5976f56 924 SUPERFAMILY SSF52009 392 513 1.83E-35 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 THII_2875 be6d4b976fca811a56556d41ef9a4384 581 Gene3D G3DSA:1.10.760.10 56 155 4.8E-34 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2875 be6d4b976fca811a56556d41ef9a4384 581 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 74 147 8.3E-10 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_2875 be6d4b976fca811a56556d41ef9a4384 581 Pfam PF02239 Cytochrome D1 heme domain 184 576 9.2E-155 T 15-10-2018 THII_2875 be6d4b976fca811a56556d41ef9a4384 581 Gene3D G3DSA:2.140.10.20 156 581 7.4E-204 T 15-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily THII_2875 be6d4b976fca811a56556d41ef9a4384 581 SUPERFAMILY SSF46626 53 172 1.98E-21 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2875 be6d4b976fca811a56556d41ef9a4384 581 SUPERFAMILY SSF51004 156 581 1.7E-129 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily THII_0225 341878f2bd74d247774cc53f20653c26 734 Pfam PF13538 UvrD-like helicase C-terminal domain 600 649 1.4E-8 T 15-10-2018 IPR027785 UvrD-like helicase C-terminal domain THII_0225 341878f2bd74d247774cc53f20653c26 734 Gene3D G3DSA:3.40.50.300 482 672 9.5E-20 T 15-10-2018 THII_0225 341878f2bd74d247774cc53f20653c26 734 SUPERFAMILY SSF52540 215 655 9.91E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0225 341878f2bd74d247774cc53f20653c26 734 Gene3D G3DSA:3.40.50.300 212 413 2.2E-18 T 15-10-2018 THII_1330 045fa9fd82b468929724eee17ad272eb 198 Pfam PF01725 Ham1 family 4 190 8.2E-57 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 THII_1330 045fa9fd82b468929724eee17ad272eb 198 Gene3D G3DSA:3.90.950.10 1 198 4.2E-78 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like THII_1330 045fa9fd82b468929724eee17ad272eb 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 192 6.0E-57 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 THII_1330 045fa9fd82b468929724eee17ad272eb 198 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 49.829 T 15-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 THII_1330 045fa9fd82b468929724eee17ad272eb 198 SUPERFAMILY SSF52972 3 193 8.9E-71 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like THII_1816 ee95ca9a5b9f2df9ca86fdaef4a43a81 141 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 12 124 9.6E-21 T 15-10-2018 THII_1816 ee95ca9a5b9f2df9ca86fdaef4a43a81 141 PIRSF PIRSF004923 1 136 1.1E-20 T 15-10-2018 IPR026268 Protein RseC THII_0733 de97f038151b7478d34fc4a3bf88d2b2 386 Gene3D G3DSA:3.20.20.370 134 381 1.9E-26 T 15-10-2018 THII_0733 de97f038151b7478d34fc4a3bf88d2b2 386 Pfam PF01522 Polysaccharide deacetylase 146 237 1.2E-5 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 THII_0733 de97f038151b7478d34fc4a3bf88d2b2 386 SUPERFAMILY SSF88713 142 377 2.78E-25 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 THII_3767 59a91c7fc4ee37bb5080f8e07f539e1b 203 SUPERFAMILY SSF52141 13 200 9.48E-57 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_3767 59a91c7fc4ee37bb5080f8e07f539e1b 203 SMART SM00986 37 194 3.5E-29 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_3767 59a91c7fc4ee37bb5080f8e07f539e1b 203 SMART SM00987 37 194 3.5E-29 T 15-10-2018 THII_3767 59a91c7fc4ee37bb5080f8e07f539e1b 203 Pfam PF03167 Uracil DNA glycosylase superfamily 41 191 7.3E-23 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_3767 59a91c7fc4ee37bb5080f8e07f539e1b 203 Gene3D G3DSA:3.40.470.10 9 203 1.8E-71 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_0973 5566e7b7d45040d74cd17dcd5a78705f 260 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 83 243 4.5E-48 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 THII_0973 5566e7b7d45040d74cd17dcd5a78705f 260 Pfam PF00849 RNA pseudouridylate synthase 79 208 3.2E-12 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_0973 5566e7b7d45040d74cd17dcd5a78705f 260 Gene3D G3DSA:3.30.70.580 81 238 4.5E-45 T 15-10-2018 THII_0973 5566e7b7d45040d74cd17dcd5a78705f 260 Pfam PF01479 S4 domain 16 60 2.1E-12 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0973 5566e7b7d45040d74cd17dcd5a78705f 260 Gene3D G3DSA:3.10.290.10 11 69 3.4E-18 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 THII_0973 5566e7b7d45040d74cd17dcd5a78705f 260 SMART SM00363 15 76 3.0E-6 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0973 5566e7b7d45040d74cd17dcd5a78705f 260 SUPERFAMILY SSF55120 78 244 1.32E-38 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 THII_0973 5566e7b7d45040d74cd17dcd5a78705f 260 Gene3D G3DSA:3.30.70.1560 141 231 4.5E-45 T 15-10-2018 THII_0973 5566e7b7d45040d74cd17dcd5a78705f 260 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 117 131 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 THII_0973 5566e7b7d45040d74cd17dcd5a78705f 260 SUPERFAMILY SSF55174 15 107 3.09E-12 T 15-10-2018 THII_3430 300ea29a8f56868eaeeed66b15be7925 217 Gene3D G3DSA:3.40.50.1000 8 206 4.6E-51 T 15-10-2018 IPR023214 HAD superfamily THII_3430 300ea29a8f56868eaeeed66b15be7925 217 Gene3D G3DSA:1.10.150.240 20 85 4.6E-51 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THII_3430 300ea29a8f56868eaeeed66b15be7925 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 82 178 1.4E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3430 300ea29a8f56868eaeeed66b15be7925 217 SUPERFAMILY SSF56784 3 214 5.93E-55 T 15-10-2018 IPR036412 HAD-like superfamily THII_3430 300ea29a8f56868eaeeed66b15be7925 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 183 8.8E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3430 300ea29a8f56868eaeeed66b15be7925 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 185 5.3E-34 T 15-10-2018 THII_3577 1566e190681caa3ee000f0c568f8ed6f 593 SUPERFAMILY SSF56235 1 226 8.58E-63 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_3577 1566e190681caa3ee000f0c568f8ed6f 593 SUPERFAMILY SSF52402 236 565 2.93E-68 T 15-10-2018 THII_3577 1566e190681caa3ee000f0c568f8ed6f 593 Pfam PF13537 Glutamine amidotransferase domain 47 167 4.2E-45 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain THII_3577 1566e190681caa3ee000f0c568f8ed6f 593 Gene3D G3DSA:3.60.20.10 9 188 1.9E-61 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_3577 1566e190681caa3ee000f0c568f8ed6f 593 Pfam PF00733 Asparagine synthase 246 588 9.3E-81 T 15-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 THII_3577 1566e190681caa3ee000f0c568f8ed6f 593 PIRSF PIRSF001589 1 593 2.1E-195 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 THII_3577 1566e190681caa3ee000f0c568f8ed6f 593 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 521 7.9E-133 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 THII_3577 1566e190681caa3ee000f0c568f8ed6f 593 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 589 2.8E-284 T 15-10-2018 IPR017535 Asparagine synthase family amidotransferase THII_0608 4838d6cbacfec11ad568b70c29552e37 160 Pfam PF05685 Putative restriction endonuclease 10 129 3.7E-13 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0608 4838d6cbacfec11ad568b70c29552e37 160 Gene3D G3DSA:3.90.1570.10 4 147 3.1E-15 T 15-10-2018 THII_0608 4838d6cbacfec11ad568b70c29552e37 160 SUPERFAMILY SSF52980 15 149 9.12E-16 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2051 c807c7e1d32b150756acfa25b120be76 270 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 4 252 37.219 T 15-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 THII_2051 c807c7e1d32b150756acfa25b120be76 270 SUPERFAMILY SSF53335 5 252 2.41E-66 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2051 c807c7e1d32b150756acfa25b120be76 270 Pfam PF04445 Putative SAM-dependent methyltransferase 36 250 1.4E-87 T 15-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 THII_2051 c807c7e1d32b150756acfa25b120be76 270 Gene3D G3DSA:3.40.50.150 61 256 4.5E-74 T 15-10-2018 THII_0675 e1b5ce9690ab9209f45233de7c34bb0b 203 SUPERFAMILY SSF55729 21 178 9.14E-8 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_0675 e1b5ce9690ab9209f45233de7c34bb0b 203 Gene3D G3DSA:3.40.630.30 10 173 4.3E-6 T 15-10-2018 THII_0291 d101b385e69d66d71e3a1e003a4d5892 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.738 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0291 d101b385e69d66d71e3a1e003a4d5892 118 Gene3D G3DSA:4.10.910.10 72 118 2.6E-26 T 15-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0291 d101b385e69d66d71e3a1e003a4d5892 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.0E-52 T 15-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0291 d101b385e69d66d71e3a1e003a4d5892 118 SUPERFAMILY SSF46946 2 114 4.12E-44 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 THII_0291 d101b385e69d66d71e3a1e003a4d5892 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.1E-29 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0291 d101b385e69d66d71e3a1e003a4d5892 118 Gene3D G3DSA:1.10.8.50 1 71 6.2E-27 T 15-10-2018 THII_0291 d101b385e69d66d71e3a1e003a4d5892 118 PIRSF PIRSF002134 1 118 3.4E-41 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0291 d101b385e69d66d71e3a1e003a4d5892 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 15-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_3495 bf66215c647efad5698fc58a35d523c3 159 SUPERFAMILY SSF52980 11 135 6.43E-16 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3495 bf66215c647efad5698fc58a35d523c3 159 Pfam PF05685 Putative restriction endonuclease 13 139 6.4E-13 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3495 bf66215c647efad5698fc58a35d523c3 159 Gene3D G3DSA:3.90.1570.10 3 150 1.2E-15 T 15-10-2018 THII_3822 42ebef999015cc103f77708c6096e85d 345 SMART SM00859 3 141 8.9E-62 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 THII_3822 42ebef999015cc103f77708c6096e85d 345 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 141 2.1E-37 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 THII_3822 42ebef999015cc103f77708c6096e85d 345 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 345 1.5E-131 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 THII_3822 42ebef999015cc103f77708c6096e85d 345 Gene3D G3DSA:3.40.50.720 3 331 5.7E-129 T 15-10-2018 THII_3822 42ebef999015cc103f77708c6096e85d 345 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 339 43.055 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 THII_3822 42ebef999015cc103f77708c6096e85d 345 SUPERFAMILY SSF51735 2 176 1.25E-56 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3822 42ebef999015cc103f77708c6096e85d 345 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 15-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 THII_3822 42ebef999015cc103f77708c6096e85d 345 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 160 316 1.1E-17 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 THII_3822 42ebef999015cc103f77708c6096e85d 345 SUPERFAMILY SSF55347 149 313 7.63E-53 T 15-10-2018 THII_3822 42ebef999015cc103f77708c6096e85d 345 Gene3D G3DSA:3.30.360.10 147 313 5.7E-129 T 15-10-2018 THII_3781 e38fba362745acf7d51a743f61796736 465 Gene3D G3DSA:3.30.750.44 51 344 7.5E-96 T 15-10-2018 THII_3781 e38fba362745acf7d51a743f61796736 465 SUPERFAMILY SSF52096 40 381 2.82E-84 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_3781 e38fba362745acf7d51a743f61796736 465 Pfam PF03572 Peptidase family S41 203 367 1.8E-58 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 THII_3781 e38fba362745acf7d51a743f61796736 465 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 57 378 1.7E-107 T 15-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 THII_3781 e38fba362745acf7d51a743f61796736 465 SUPERFAMILY SSF50156 93 186 1.78E-20 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 THII_3781 e38fba362745acf7d51a743f61796736 465 Pfam PF13180 PDZ domain 104 183 4.6E-13 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_3781 e38fba362745acf7d51a743f61796736 465 SMART SM00245 177 369 1.8E-72 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 THII_3781 e38fba362745acf7d51a743f61796736 465 Gene3D G3DSA:3.90.226.10 192 366 7.5E-96 T 15-10-2018 THII_3781 e38fba362745acf7d51a743f61796736 465 SMART SM00228 104 175 5.6E-17 T 15-10-2018 IPR001478 PDZ domain GO:0005515 THII_3781 e38fba362745acf7d51a743f61796736 465 Gene3D G3DSA:2.30.42.10 104 191 7.5E-96 T 15-10-2018 THII_2884 709bf4579d692cb65a6e40ef57de7600 762 Gene3D G3DSA:2.130.10.10 49 523 6.2E-178 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2884 709bf4579d692cb65a6e40ef57de7600 762 TIGRFAM TIGR04246 nitrous_NosZ_Gp: nitrous-oxide reductase, Sec-dependent 46 642 1.1E-263 T 15-10-2018 IPR026468 Nitrous-oxide reductase, Sec-dependent THII_2884 709bf4579d692cb65a6e40ef57de7600 762 SUPERFAMILY SSF49503 523 642 7.25E-24 T 15-10-2018 IPR008972 Cupredoxin THII_2884 709bf4579d692cb65a6e40ef57de7600 762 SUPERFAMILY SSF50974 49 515 5.89E-86 T 15-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 THII_2884 709bf4579d692cb65a6e40ef57de7600 762 Gene3D G3DSA:2.60.40.420 524 641 5.7E-29 T 15-10-2018 IPR008972 Cupredoxin THII_2884 709bf4579d692cb65a6e40ef57de7600 762 Pfam PF13473 Cupredoxin-like domain 555 639 3.8E-7 T 15-10-2018 IPR028096 EfeO-type cupredoxin-like domain THII_0322 22e7297983d4de778bf6e0bbf59b94d1 479 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site THII_0322 22e7297983d4de778bf6e0bbf59b94d1 479 Pfam PF00474 Sodium:solute symporter family 33 429 2.2E-109 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 THII_0322 22e7297983d4de778bf6e0bbf59b94d1 479 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 429 4.6E-100 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 THII_0322 22e7297983d4de778bf6e0bbf59b94d1 479 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 4 471 5.2E-203 T 15-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 THII_0322 22e7297983d4de778bf6e0bbf59b94d1 479 Gene3D G3DSA:1.20.1730.10 21 474 1.8E-88 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily THII_3013 72ebfb6bd0f68d184011096f08621fd2 79 Pfam PF01710 Transposase 3 67 8.2E-15 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_3898 6963678356228a6b6ac5f829fededfcb 145 SUPERFAMILY SSF82784 1 136 1.7E-38 T 15-10-2018 IPR036102 OsmC/Ohr superfamily THII_3898 6963678356228a6b6ac5f829fededfcb 145 Pfam PF02566 OsmC-like protein 34 129 4.5E-19 T 15-10-2018 IPR003718 OsmC/Ohr family THII_3898 6963678356228a6b6ac5f829fededfcb 145 Gene3D G3DSA:3.30.300.20 39 138 2.9E-32 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta THII_3898 6963678356228a6b6ac5f829fededfcb 145 Gene3D G3DSA:2.20.25.10 1 31 2.8E-7 T 15-10-2018 THII_2395 ab84ef757d469a4e38b5d8f38a2d598d 415 Pfam PF13393 Histidyl-tRNA synthetase 203 339 1.4E-36 T 15-10-2018 THII_2395 ab84ef757d469a4e38b5d8f38a2d598d 415 Pfam PF13393 Histidyl-tRNA synthetase 12 182 1.1E-67 T 15-10-2018 THII_2395 ab84ef757d469a4e38b5d8f38a2d598d 415 Gene3D G3DSA:3.30.930.10 5 346 1.3E-64 T 15-10-2018 THII_2395 ab84ef757d469a4e38b5d8f38a2d598d 415 SUPERFAMILY SSF55681 7 345 1.47E-50 T 15-10-2018 THII_2395 ab84ef757d469a4e38b5d8f38a2d598d 415 PIRSF PIRSF001549 6 405 5.0E-42 T 15-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 THII_2395 ab84ef757d469a4e38b5d8f38a2d598d 415 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 397 29.13 T 15-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 THII_3634 f6b57c4311b5532dccd230b2d0a9f029 611 Pfam PF13522 Glutamine amidotransferase domain 65 192 1.9E-21 T 15-10-2018 THII_3634 f6b57c4311b5532dccd230b2d0a9f029 611 Gene3D G3DSA:3.40.50.10490 252 610 1.4E-144 T 15-10-2018 THII_3634 f6b57c4311b5532dccd230b2d0a9f029 611 SUPERFAMILY SSF56235 2 234 1.72E-72 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_3634 f6b57c4311b5532dccd230b2d0a9f029 611 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 611 1.0E-255 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 THII_3634 f6b57c4311b5532dccd230b2d0a9f029 611 SUPERFAMILY SSF53697 247 611 1.3E-107 T 15-10-2018 THII_3634 f6b57c4311b5532dccd230b2d0a9f029 611 Pfam PF01380 SIS domain 464 593 2.3E-24 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 THII_3634 f6b57c4311b5532dccd230b2d0a9f029 611 Pfam PF01380 SIS domain 296 419 2.0E-29 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 THII_3634 f6b57c4311b5532dccd230b2d0a9f029 611 Gene3D G3DSA:3.60.20.10 2 243 3.1E-79 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_3634 f6b57c4311b5532dccd230b2d0a9f029 611 Gene3D G3DSA:3.40.50.10490 449 596 1.4E-144 T 15-10-2018 THII_3634 f6b57c4311b5532dccd230b2d0a9f029 611 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 611 39.984 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 THII_0215 754f2ba25528cd148ddbbebaa2bdc7f1 391 PIRSF PIRSF000355 40 391 4.5E-86 T 15-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0215 754f2ba25528cd148ddbbebaa2bdc7f1 391 SUPERFAMILY SSF47240 61 388 8.79E-71 T 15-10-2018 IPR009078 Ferritin-like superfamily THII_0215 754f2ba25528cd148ddbbebaa2bdc7f1 391 Pfam PF00268 Ribonucleotide reductase, small chain 74 358 4.9E-60 T 15-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0215 754f2ba25528cd148ddbbebaa2bdc7f1 391 Gene3D G3DSA:1.10.620.20 68 384 6.2E-83 T 15-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 THII_0392 8c11f50a8008ea0a32577364831b0649 118 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 4.8E-35 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 THII_0392 8c11f50a8008ea0a32577364831b0649 118 Pfam PF02152 Dihydroneopterin aldolase 4 113 4.8E-35 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 THII_0392 8c11f50a8008ea0a32577364831b0649 118 SMART SM00905 4 114 5.1E-46 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 THII_0392 8c11f50a8008ea0a32577364831b0649 118 Gene3D G3DSA:3.30.1130.10 1 118 6.9E-43 T 15-10-2018 THII_0392 8c11f50a8008ea0a32577364831b0649 118 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 3.8E-27 T 15-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 THII_0392 8c11f50a8008ea0a32577364831b0649 118 SUPERFAMILY SSF55620 1 115 2.22E-37 T 15-10-2018 THII_0048 251172bbdf8d6a918236aaf26cad40bf 256 PIRSF PIRSF005902 1 256 1.4E-68 T 15-10-2018 IPR001130 TatD family GO:0016788 THII_0048 251172bbdf8d6a918236aaf26cad40bf 256 SUPERFAMILY SSF51556 4 254 1.55E-79 T 15-10-2018 IPR032466 Metal-dependent hydrolase THII_0048 251172bbdf8d6a918236aaf26cad40bf 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 4 253 2.9E-62 T 15-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 THII_0048 251172bbdf8d6a918236aaf26cad40bf 256 Pfam PF01026 TatD related DNase 5 253 5.6E-66 T 15-10-2018 IPR001130 TatD family GO:0016788 THII_0048 251172bbdf8d6a918236aaf26cad40bf 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 THII_0048 251172bbdf8d6a918236aaf26cad40bf 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 THII_0048 251172bbdf8d6a918236aaf26cad40bf 256 Gene3D G3DSA:3.20.20.140 1 255 1.4E-81 T 15-10-2018 THII_3756 1dd16f9cc3d9f1a7625ca849b682dd38 288 Gene3D G3DSA:3.30.420.470 89 282 1.8E-15 T 15-10-2018 THII_3756 1dd16f9cc3d9f1a7625ca849b682dd38 288 Pfam PF01710 Transposase 1 116 1.7E-16 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_3756 1dd16f9cc3d9f1a7625ca849b682dd38 288 SUPERFAMILY SSF46689 3 85 1.25E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3756 1dd16f9cc3d9f1a7625ca849b682dd38 288 Pfam PF13358 DDE superfamily endonuclease 133 270 8.2E-31 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_3756 1dd16f9cc3d9f1a7625ca849b682dd38 288 SUPERFAMILY SSF53098 189 279 6.07E-5 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_1531 ebd02c628c471fe1a15cc51199d2bab5 344 Gene3D G3DSA:1.10.10.10 261 339 9.4E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1531 ebd02c628c471fe1a15cc51199d2bab5 344 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 239 1.1E-116 T 15-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 THII_1531 ebd02c628c471fe1a15cc51199d2bab5 344 Gene3D G3DSA:3.40.50.300 22 185 5.9E-36 T 15-10-2018 THII_1531 ebd02c628c471fe1a15cc51199d2bab5 344 SUPERFAMILY SSF46785 261 332 5.83E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_1531 ebd02c628c471fe1a15cc51199d2bab5 344 Gene3D G3DSA:1.10.8.60 186 260 5.7E-31 T 15-10-2018 THII_1531 ebd02c628c471fe1a15cc51199d2bab5 344 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 2.1E-144 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 THII_1531 ebd02c628c471fe1a15cc51199d2bab5 344 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 332 4.0E-28 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 THII_1531 ebd02c628c471fe1a15cc51199d2bab5 344 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 344 173.628 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 THII_1531 ebd02c628c471fe1a15cc51199d2bab5 344 SMART SM00382 55 182 7.6E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1531 ebd02c628c471fe1a15cc51199d2bab5 344 SUPERFAMILY SSF52540 24 256 1.16E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1531 ebd02c628c471fe1a15cc51199d2bab5 344 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 9.4E-33 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 THII_1663 1db6e3550ac0be3c2d903d0f5077bb32 319 Pfam PF00005 ABC transporter 17 160 6.6E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_1663 1db6e3550ac0be3c2d903d0f5077bb32 319 Gene3D G3DSA:3.40.50.300 1 239 1.9E-66 T 15-10-2018 THII_1663 1db6e3550ac0be3c2d903d0f5077bb32 319 SUPERFAMILY SSF52540 2 224 6.99E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1663 1db6e3550ac0be3c2d903d0f5077bb32 319 SMART SM00382 26 216 6.9E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 SUPERFAMILY SSF52922 533 663 6.94E-44 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 662 0.0 T 15-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 Gene3D G3DSA:3.40.50.920 538 663 5.6E-43 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 2.7E-15 T 15-10-2018 IPR033248 Transketolase, C-terminal domain THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 SUPERFAMILY SSF52518 5 329 2.65E-121 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 5.4E-169 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 Gene3D G3DSA:3.40.50.970 3 326 7.0E-134 T 15-10-2018 THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 SMART SM00861 355 525 3.1E-67 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 SUPERFAMILY SSF52518 337 526 6.8E-68 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 Gene3D G3DSA:3.40.50.970 327 537 1.9E-81 T 15-10-2018 THII_0785 3c7091c0f076b2050941bf1f3a86b907 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 525 1.6E-46 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain THII_0834 3684a8d2b3eea25ee28e6c73388f5d8c 417 Gene3D G3DSA:1.10.3860.10 1 409 3.6E-136 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 THII_0834 3684a8d2b3eea25ee28e6c73388f5d8c 417 SUPERFAMILY SSF118215 6 403 2.48E-118 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 THII_0834 3684a8d2b3eea25ee28e6c73388f5d8c 417 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 6.4E-55 T 15-10-2018 THII_0834 3684a8d2b3eea25ee28e6c73388f5d8c 417 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 6.4E-55 T 15-10-2018 THII_0834 3684a8d2b3eea25ee28e6c73388f5d8c 417 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 6.4E-55 T 15-10-2018 THII_0834 3684a8d2b3eea25ee28e6c73388f5d8c 417 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 6.4E-55 T 15-10-2018 THII_0834 3684a8d2b3eea25ee28e6c73388f5d8c 417 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 6.4E-55 T 15-10-2018 THII_0834 3684a8d2b3eea25ee28e6c73388f5d8c 417 PRINTS PR00173 Glutamate-aspartate symporter signature 227 246 6.4E-55 T 15-10-2018 THII_0834 3684a8d2b3eea25ee28e6c73388f5d8c 417 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 6.4E-55 T 15-10-2018 THII_0834 3684a8d2b3eea25ee28e6c73388f5d8c 417 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 6.4E-55 T 15-10-2018 THII_0834 3684a8d2b3eea25ee28e6c73388f5d8c 417 Pfam PF00375 Sodium:dicarboxylate symporter family 6 401 2.1E-127 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 THII_1747 4d748d49335e2f68cc8189590ce04063 269 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 3.4E-100 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1747 4d748d49335e2f68cc8189590ce04063 269 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.109 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1747 4d748d49335e2f68cc8189590ce04063 269 Gene3D G3DSA:1.10.287.610 103 150 2.2E-88 T 15-10-2018 THII_1747 4d748d49335e2f68cc8189590ce04063 269 Pfam PF00318 Ribosomal protein S2 9 224 1.2E-93 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1747 4d748d49335e2f68cc8189590ce04063 269 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 15-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 THII_1747 4d748d49335e2f68cc8189590ce04063 269 SUPERFAMILY SSF52313 6 230 9.42E-94 T 15-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily THII_1747 4d748d49335e2f68cc8189590ce04063 269 Gene3D G3DSA:3.40.50.10490 8 219 2.2E-88 T 15-10-2018 THII_1747 4d748d49335e2f68cc8189590ce04063 269 PRINTS PR00395 Ribosomal protein S2 signature 196 210 5.1E-36 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1747 4d748d49335e2f68cc8189590ce04063 269 PRINTS PR00395 Ribosomal protein S2 signature 6 24 5.1E-36 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1747 4d748d49335e2f68cc8189590ce04063 269 PRINTS PR00395 Ribosomal protein S2 signature 37 46 5.1E-36 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1747 4d748d49335e2f68cc8189590ce04063 269 PRINTS PR00395 Ribosomal protein S2 signature 158 175 5.1E-36 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1747 4d748d49335e2f68cc8189590ce04063 269 PRINTS PR00395 Ribosomal protein S2 signature 175 186 5.1E-36 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1747 4d748d49335e2f68cc8189590ce04063 269 PRINTS PR00395 Ribosomal protein S2 signature 87 104 5.1E-36 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 Gene3D G3DSA:1.10.1670.10 11 203 4.5E-76 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 PIRSF PIRSF001435 1 211 2.2E-51 T 15-10-2018 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 SMART SM00478 38 185 6.1E-54 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 SMART SM00525 186 206 0.0013 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 15-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.154 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 163 2.1E-21 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.1E-82 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.5E-5 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 Pfam PF00633 Helix-hairpin-helix motif 101 127 8.4E-6 T 15-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 Gene3D G3DSA:1.10.340.30 21 132 4.5E-76 T 15-10-2018 THII_2415 aeb1178c5f48525c683e3ba5ffaf29fe 218 SUPERFAMILY SSF48150 3 207 3.77E-71 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 THII_2551 9b86434ee38d18f5dc3608902cd18bff 267 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 62 249 7.1E-33 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 THII_2551 9b86434ee38d18f5dc3608902cd18bff 267 Pfam PF02592 Putative vitamin uptake transporter 69 242 1.2E-40 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 THII_2551 9b86434ee38d18f5dc3608902cd18bff 267 Hamap MF_02088 Probable queuosine precursor transporter. 15 255 16.402 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 THII_0641 2c3b270b5226161e0c5d3495aacf3d26 246 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 231 18.348 T 15-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 THII_0641 2c3b270b5226161e0c5d3495aacf3d26 246 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 50 229 6.3E-37 T 15-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 THII_0641 2c3b270b5226161e0c5d3495aacf3d26 246 SUPERFAMILY SSF64383 99 235 3.01E-33 T 15-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 THII_0641 2c3b270b5226161e0c5d3495aacf3d26 246 Gene3D G3DSA:3.30.1400.10 97 237 1.3E-40 T 15-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 THII_0641 2c3b270b5226161e0c5d3495aacf3d26 246 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 101 229 1.0E-22 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 THII_0641 2c3b270b5226161e0c5d3495aacf3d26 246 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 101 228 1.0E-34 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 THII_0641 2c3b270b5226161e0c5d3495aacf3d26 246 SMART SM00771 98 229 1.2E-34 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 THII_0862 cf96583d711999d502f809b31ced4117 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 9.1E-86 T 15-10-2018 THII_0862 cf96583d711999d502f809b31ced4117 260 Gene3D G3DSA:3.40.50.720 7 203 1.3E-30 T 15-10-2018 THII_0862 cf96583d711999d502f809b31ced4117 260 SUPERFAMILY SSF51735 6 255 1.44E-63 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0862 cf96583d711999d502f809b31ced4117 260 Gene3D G3DSA:1.10.8.400 204 259 3.4E-23 T 15-10-2018 THII_0862 cf96583d711999d502f809b31ced4117 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.2E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0862 cf96583d711999d502f809b31ced4117 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.2E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0862 cf96583d711999d502f809b31ced4117 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.2E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0862 cf96583d711999d502f809b31ced4117 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.2E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0862 cf96583d711999d502f809b31ced4117 260 PIRSF PIRSF000094 1 260 1.9E-117 T 15-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 SMART SM00448 5 118 7.4E-43 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 SMART SM00052 313 563 6.5E-120 T 15-10-2018 IPR001633 EAL domain THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 Gene3D G3DSA:3.20.20.450 316 571 4.5E-101 T 15-10-2018 IPR035919 EAL domain superfamily THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 Gene3D G3DSA:3.40.50.2300 2 136 5.0E-40 T 15-10-2018 THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 SUPERFAMILY SSF52172 4 133 7.26E-43 T 15-10-2018 IPR011006 CheY-like superfamily THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 SUPERFAMILY SSF141868 318 571 7.98E-90 T 15-10-2018 IPR035919 EAL domain superfamily THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 302 2.8E-37 T 15-10-2018 IPR000160 GGDEF domain THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 Gene3D G3DSA:3.30.70.270 137 315 1.1E-56 T 15-10-2018 THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 Pfam PF00563 EAL domain 319 558 7.5E-75 T 15-10-2018 IPR001633 EAL domain THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 SMART SM00267 130 303 8.2E-56 T 15-10-2018 IPR000160 GGDEF domain THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 SUPERFAMILY SSF55073 146 304 5.1E-43 T 15-10-2018 IPR029787 Nucleotide cyclase THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 Pfam PF00072 Response regulator receiver domain 7 119 6.4E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0877 688a6b502220de346b4a7bf5a64e87a0 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 141 298 2.3E-44 T 15-10-2018 IPR000160 GGDEF domain THII_1110 0999f394eac4e91b866b61e1aeb85eb6 404 SUPERFAMILY SSF52540 7 370 1.4E-29 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1110 0999f394eac4e91b866b61e1aeb85eb6 404 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 29 351 3.7E-32 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_1110 0999f394eac4e91b866b61e1aeb85eb6 404 Gene3D G3DSA:3.40.50.300 6 372 1.3E-30 T 15-10-2018 THII_1110 0999f394eac4e91b866b61e1aeb85eb6 404 PIRSF PIRSF029347 5 383 1.9E-33 T 15-10-2018 IPR014555 RecF-like THII_1051 7c378bdef90fdf444b4b2ea68980852c 138 SUPERFAMILY SSF53335 3 111 1.25E-31 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1051 7c378bdef90fdf444b4b2ea68980852c 138 Gene3D G3DSA:3.40.50.150 23 115 1.3E-33 T 15-10-2018 THII_1051 7c378bdef90fdf444b4b2ea68980852c 138 Pfam PF13649 Methyltransferase domain 44 112 3.2E-21 T 15-10-2018 THII_3148 c060cc99a1d39ad233a89b695415b710 100 Pfam PF01381 Helix-turn-helix 14 67 4.3E-10 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_3148 c060cc99a1d39ad233a89b695415b710 100 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 82 6.5E-29 T 15-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 THII_3148 c060cc99a1d39ad233a89b695415b710 100 SMART SM00530 13 68 3.6E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_3148 c060cc99a1d39ad233a89b695415b710 100 Gene3D G3DSA:1.10.260.40 2 98 1.5E-28 T 15-10-2018 THII_3148 c060cc99a1d39ad233a89b695415b710 100 SUPERFAMILY SSF47413 9 91 3.67E-25 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_2799 11d2b73f3d7b2817dfab237c1d9c267b 584 Pfam PF16861 Carbamoyltransferase C-terminus 413 583 7.3E-68 T 15-10-2018 IPR031730 Carbamoyltransferase, C-terminal THII_2799 11d2b73f3d7b2817dfab237c1d9c267b 584 Gene3D G3DSA:3.30.420.40 33 358 2.4E-72 T 15-10-2018 THII_2799 11d2b73f3d7b2817dfab237c1d9c267b 584 SUPERFAMILY SSF53067 33 360 5.18E-6 T 15-10-2018 THII_2799 11d2b73f3d7b2817dfab237c1d9c267b 584 Gene3D G3DSA:3.90.870.20 373 582 2.1E-78 T 15-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily THII_2799 11d2b73f3d7b2817dfab237c1d9c267b 584 Gene3D G3DSA:3.30.420.350 154 352 2.4E-72 T 15-10-2018 THII_2799 11d2b73f3d7b2817dfab237c1d9c267b 584 Pfam PF02543 Carbamoyltransferase N-terminus 33 357 7.8E-45 T 15-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 THII_3252 62ba590f3819ac7954c97411826d5f88 425 Gene3D G3DSA:1.25.40.10 189 279 2.8E-21 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3252 62ba590f3819ac7954c97411826d5f88 425 SMART SM00028 155 188 0.0074 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3252 62ba590f3819ac7954c97411826d5f88 425 SMART SM00028 227 260 410.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3252 62ba590f3819ac7954c97411826d5f88 425 SUPERFAMILY SSF48452 152 261 1.41E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3252 62ba590f3819ac7954c97411826d5f88 425 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 5 114 2.9E-25 T 15-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI THII_3252 62ba590f3819ac7954c97411826d5f88 425 Pfam PF13432 Tetratricopeptide repeat 216 260 0.0016 T 15-10-2018 THII_3252 62ba590f3819ac7954c97411826d5f88 425 Pfam PF13432 Tetratricopeptide repeat 136 182 7.1E-6 T 15-10-2018 THII_3252 62ba590f3819ac7954c97411826d5f88 425 Gene3D G3DSA:1.25.40.10 44 188 9.6E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2489 1620555db93721f481ff44ba1da7a02c 534 SUPERFAMILY SSF56425 235 350 1.64E-42 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_2489 1620555db93721f481ff44ba1da7a02c 534 PIRSF PIRSF000171 1 258 1.2E-22 T 15-10-2018 THII_2489 1620555db93721f481ff44ba1da7a02c 534 PIRSF PIRSF000171 330 530 1.6E-11 T 15-10-2018 THII_2489 1620555db93721f481ff44ba1da7a02c 534 Gene3D G3DSA:3.90.700.10 245 355 3.3E-156 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_2489 1620555db93721f481ff44ba1da7a02c 534 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 9.4E-9 T 15-10-2018 THII_2489 1620555db93721f481ff44ba1da7a02c 534 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 352 374 9.4E-9 T 15-10-2018 THII_2489 1620555db93721f481ff44ba1da7a02c 534 SUPERFAMILY SSF51905 3 445 7.78E-74 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2489 1620555db93721f481ff44ba1da7a02c 534 Pfam PF00890 FAD binding domain 8 389 1.2E-100 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_2489 1620555db93721f481ff44ba1da7a02c 534 Gene3D G3DSA:1.20.58.100 422 534 7.4E-42 T 15-10-2018 THII_2489 1620555db93721f481ff44ba1da7a02c 534 Pfam PF02910 Fumarate reductase flavoprotein C-term 438 518 3.9E-13 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_2489 1620555db93721f481ff44ba1da7a02c 534 SUPERFAMILY SSF46977 422 519 8.63E-31 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_2489 1620555db93721f481ff44ba1da7a02c 534 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 6 517 1.7E-198 T 15-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 THII_2489 1620555db93721f481ff44ba1da7a02c 534 Gene3D G3DSA:3.50.50.60 8 399 3.3E-156 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1356 7ee8f3ad39250fe61704873be736a616 64 Pfam PF13175 AAA ATPase domain 1 48 2.3E-9 T 15-10-2018 THII_1356 7ee8f3ad39250fe61704873be736a616 64 Gene3D G3DSA:3.40.50.300 1 60 1.6E-10 T 15-10-2018 THII_1356 7ee8f3ad39250fe61704873be736a616 64 SUPERFAMILY SSF52540 1 47 6.92E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1316 fac7f8ee7f4a9361505f3d0fc4e80aa2 413 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 226 404 4.2E-70 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_1316 fac7f8ee7f4a9361505f3d0fc4e80aa2 413 ProSitePatterns PS00452 Guanylate cyclase signature. 337 360 - T 15-10-2018 IPR018297 Adenylyl cyclase class-4/guanylyl cyclase, conserved site GO:0009190|GO:0016849|GO:0035556 THII_1316 fac7f8ee7f4a9361505f3d0fc4e80aa2 413 SMART SM00044 197 394 2.6E-82 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_1316 fac7f8ee7f4a9361505f3d0fc4e80aa2 413 Gene3D G3DSA:3.30.70.1230 222 407 5.2E-81 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1316 fac7f8ee7f4a9361505f3d0fc4e80aa2 413 SUPERFAMILY SSF55073 219 403 1.44E-70 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SMART SM00387 942 1054 2.6E-34 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SUPERFAMILY SSF158472 321 368 6.8E-8 T 15-10-2018 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SUPERFAMILY SSF52172 1074 1193 7.97E-38 T 15-10-2018 IPR011006 CheY-like superfamily THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Pfam PF00072 Response regulator receiver domain 1078 1189 3.7E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Gene3D G3DSA:1.20.1480.50 281 377 8.9E-10 T 15-10-2018 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Pfam PF13426 PAS domain 681 782 1.2E-17 T 15-10-2018 IPR000014 PAS domain THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SUPERFAMILY SSF55785 530 659 7.41E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 943 1052 2.0E-24 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Gene3D G3DSA:3.30.450.20 47 193 6.2E-13 T 15-10-2018 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SMART SM00086 619 661 0.21 T 15-10-2018 IPR001610 PAC motif THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SMART SM00086 741 783 8.0E-8 T 15-10-2018 IPR001610 PAC motif THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Gene3D G3DSA:1.10.287.130 817 896 1.2E-26 T 15-10-2018 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SMART SM00304 318 370 1.9E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Gene3D G3DSA:3.40.50.12740 1076 1198 1.1E-39 T 15-10-2018 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Pfam PF02743 Cache domain 34 280 9.3E-16 T 15-10-2018 IPR033479 Double Cache domain 1 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 997 1007 1.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 979 993 1.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1038 1051 1.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1014 1032 1.5E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SUPERFAMILY SSF55874 885 1052 5.24E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Gene3D G3DSA:3.30.450.20 533 667 1.0E-25 T 15-10-2018 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Pfam PF00512 His Kinase A (phospho-acceptor) domain 828 896 8.8E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Pfam PF00672 HAMP domain 321 366 4.0E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SMART SM00448 1076 1189 3.4E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Gene3D G3DSA:3.30.450.20 668 816 1.4E-40 T 15-10-2018 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 666 790 4.8E-26 T 15-10-2018 IPR000014 PAS domain THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 541 668 1.6E-21 T 15-10-2018 IPR000014 PAS domain THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SUPERFAMILY SSF47384 814 896 2.75E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Pfam PF00989 PAS fold 546 658 1.6E-14 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SUPERFAMILY SSF55785 677 780 7.09E-30 T 15-10-2018 IPR035965 PAS domain superfamily THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SMART SM00091 669 735 2.7E-7 T 15-10-2018 IPR000014 PAS domain THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SMART SM00091 545 612 5.8E-11 T 15-10-2018 IPR000014 PAS domain THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 SMART SM00388 828 896 1.7E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1131 91e402ccfa9bcd0fda903cc69932b03a 1199 Gene3D G3DSA:3.30.565.10 897 1055 2.7E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2911 0dd40753871938858d3aaab0775ecc60 437 SMART SM00997 198 357 1.1E-112 T 15-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 THII_2911 0dd40753871938858d3aaab0775ecc60 437 SMART SM00996 12 436 0.0 T 15-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 THII_2911 0dd40753871938858d3aaab0775ecc60 437 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 220 236 - T 15-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 THII_2911 0dd40753871938858d3aaab0775ecc60 437 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 429 1.1E-197 T 15-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 THII_2911 0dd40753871938858d3aaab0775ecc60 437 SUPERFAMILY SSF51735 198 357 1.32E-79 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2911 0dd40753871938858d3aaab0775ecc60 437 PIRSF PIRSF001109 3 437 1.8E-200 T 15-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 THII_2911 0dd40753871938858d3aaab0775ecc60 437 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 198 357 9.4E-82 T 15-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 THII_2911 0dd40753871938858d3aaab0775ecc60 437 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 429 49.624 T 15-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 THII_2911 0dd40753871938858d3aaab0775ecc60 437 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 15-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 THII_2911 0dd40753871938858d3aaab0775ecc60 437 Gene3D G3DSA:3.40.50.720 204 353 2.5E-76 T 15-10-2018 THII_2911 0dd40753871938858d3aaab0775ecc60 437 Gene3D G3DSA:3.40.50.1480 354 437 1.5E-40 T 15-10-2018 THII_2911 0dd40753871938858d3aaab0775ecc60 437 Gene3D G3DSA:3.40.50.1480 10 203 2.3E-96 T 15-10-2018 THII_2911 0dd40753871938858d3aaab0775ecc60 437 SUPERFAMILY SSF52283 11 437 4.7E-122 T 15-10-2018 THII_2911 0dd40753871938858d3aaab0775ecc60 437 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 148 7.4E-73 T 15-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 THII_1930 fa67ff945af35d45172120365ebbb205 505 SMART SM00044 156 356 1.3E-29 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_1930 fa67ff945af35d45172120365ebbb205 505 Gene3D G3DSA:3.40.50.2300 14 160 1.8E-30 T 15-10-2018 THII_1930 fa67ff945af35d45172120365ebbb205 505 SUPERFAMILY SSF55073 190 375 3.14E-59 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1930 fa67ff945af35d45172120365ebbb205 505 SMART SM00448 24 138 2.6E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1930 fa67ff945af35d45172120365ebbb205 505 SUPERFAMILY SSF52172 18 151 6.55E-29 T 15-10-2018 IPR011006 CheY-like superfamily THII_1930 fa67ff945af35d45172120365ebbb205 505 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 194 374 1.7E-36 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_1930 fa67ff945af35d45172120365ebbb205 505 Pfam PF00072 Response regulator receiver domain 26 138 2.6E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1930 fa67ff945af35d45172120365ebbb205 505 Gene3D G3DSA:3.30.70.1230 186 389 2.4E-71 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 SUPERFAMILY SSF52425 3 180 4.06E-56 T 15-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 SUPERFAMILY SSF48173 196 466 2.35E-102 T 15-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 Gene3D G3DSA:1.25.40.80 131 284 2.0E-90 T 15-10-2018 THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 Gene3D G3DSA:3.40.50.620 5 201 2.0E-90 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 15-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 Pfam PF03441 FAD binding domain of DNA photolyase 273 463 5.4E-78 T 15-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 PRINTS PR00147 DNA photolyase signature 343 361 5.0E-22 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 PRINTS PR00147 DNA photolyase signature 140 156 5.0E-22 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 PRINTS PR00147 DNA photolyase signature 382 396 5.0E-22 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 PRINTS PR00147 DNA photolyase signature 323 339 5.0E-22 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 Pfam PF00875 DNA photolyase 4 164 2.9E-49 T 15-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 THII_1915 c17beb0cd64e25b5d35c241ba2799d74 467 Gene3D G3DSA:1.10.579.10 292 467 9.7E-72 T 15-10-2018 THII_3153 f24b4b68d86199ded0c433a8bb488d3e 254 Pfam PF01435 Peptidase family M48 82 251 2.8E-25 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 THII_3153 f24b4b68d86199ded0c433a8bb488d3e 254 Gene3D G3DSA:3.30.2010.10 69 153 6.8E-10 T 15-10-2018 THII_2548 d8aec810c53817bafd2afc5abdb2219e 170 Pfam PF06629 MltA-interacting protein MipA 3 134 2.7E-19 T 15-10-2018 IPR010583 MltA-interacting MipA THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.7E-44 T 15-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 SMART SM00878 336 441 3.0E-61 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.0E-81 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 SUPERFAMILY SSF56059 83 344 1.2E-68 T 15-10-2018 THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 Gene3D G3DSA:3.30.470.20 87 433 2.9E-152 T 15-10-2018 THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 Gene3D G3DSA:3.40.50.20 1 85 1.0E-33 T 15-10-2018 THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 3.9E-233 T 15-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 SUPERFAMILY SSF52440 1 113 3.24E-46 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 Gene3D G3DSA:3.30.1490.20 131 203 2.9E-152 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 SUPERFAMILY SSF51246 331 444 9.42E-43 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 THII_3222 63787a9fac16c6bf4d056a52a74cff2f 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.0E-37 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 THII_1351 0f293072b86b1857f80e9a9f632f64ef 589 Gene3D G3DSA:2.40.30.170 445 456 3.0E-10 T 15-10-2018 THII_1351 0f293072b86b1857f80e9a9f632f64ef 589 Gene3D G3DSA:2.40.420.20 517 588 1.1E-11 T 15-10-2018 THII_1351 0f293072b86b1857f80e9a9f632f64ef 589 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 299 457 4.2E-9 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THII_1351 0f293072b86b1857f80e9a9f632f64ef 589 Gene3D G3DSA:2.40.50.100 311 444 3.0E-10 T 15-10-2018 THII_1351 0f293072b86b1857f80e9a9f632f64ef 589 Gene3D G3DSA:1.10.287.470 345 399 3.0E-10 T 15-10-2018 THII_2153 e59eda1076b6b75247adffdc32741399 141 Gene3D G3DSA:1.20.120.50 5 141 1.9E-41 T 15-10-2018 IPR035938 Hemerythrin-like superfamily THII_2153 e59eda1076b6b75247adffdc32741399 141 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 11 135 8.1E-38 T 15-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 THII_2153 e59eda1076b6b75247adffdc32741399 141 Pfam PF01814 Hemerythrin HHE cation binding domain 20 131 3.8E-10 T 15-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 THII_2153 e59eda1076b6b75247adffdc32741399 141 ProSitePatterns PS00550 Hemerythrin family signature. 64 87 - T 15-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 THII_2153 e59eda1076b6b75247adffdc32741399 141 SUPERFAMILY SSF47188 5 135 1.2E-35 T 15-10-2018 IPR035938 Hemerythrin-like superfamily THII_3946 e42f90b7d5c8ce19c703d7c1f50b1c59 1085 SUPERFAMILY SSF58104 800 1081 1.57E-68 T 15-10-2018 THII_3946 e42f90b7d5c8ce19c703d7c1f50b1c59 1085 SMART SM00283 833 1080 6.4E-80 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_3946 e42f90b7d5c8ce19c703d7c1f50b1c59 1085 Gene3D G3DSA:1.10.287.950 783 1082 5.8E-80 T 15-10-2018 THII_3946 e42f90b7d5c8ce19c703d7c1f50b1c59 1085 SMART SM00304 689 741 4.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3946 e42f90b7d5c8ce19c703d7c1f50b1c59 1085 SMART SM00304 588 650 0.25 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3946 e42f90b7d5c8ce19c703d7c1f50b1c59 1085 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 892 1048 1.2E-51 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_3946 e42f90b7d5c8ce19c703d7c1f50b1c59 1085 Gene3D G3DSA:1.20.120.1530 581 714 2.7E-6 T 15-10-2018 THII_3946 e42f90b7d5c8ce19c703d7c1f50b1c59 1085 Pfam PF02743 Cache domain 73 336 1.9E-19 T 15-10-2018 IPR033479 Double Cache domain 1 THII_3946 e42f90b7d5c8ce19c703d7c1f50b1c59 1085 Gene3D G3DSA:3.30.450.20 426 567 1.7E-5 T 15-10-2018 THII_3946 e42f90b7d5c8ce19c703d7c1f50b1c59 1085 Gene3D G3DSA:3.30.450.20 215 352 4.6E-5 T 15-10-2018 THII_1621 ba7ef50d0e10d9e6262f4ccb7b3f35a2 132 SUPERFAMILY SSF103084 8 93 2.22E-10 T 15-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 THII_1621 ba7ef50d0e10d9e6262f4ccb7b3f35a2 132 Pfam PF05866 Endodeoxyribonuclease RusA 18 89 7.2E-7 T 15-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 THII_1995 40cad34cf400ed81daa480e57ffd3191 247 Pfam PF01609 Transposase DDE domain 72 162 1.7E-5 T 15-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 THII_2840 14849634b57321332b6e3910964c8e2a 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 THII_2840 14849634b57321332b6e3910964c8e2a 360 Pfam PF00472 RF-1 domain 214 323 1.3E-41 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 THII_2840 14849634b57321332b6e3910964c8e2a 360 Gene3D G3DSA:3.30.70.1660 114 344 3.7E-97 T 15-10-2018 THII_2840 14849634b57321332b6e3910964c8e2a 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 2.7E-165 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 THII_2840 14849634b57321332b6e3910964c8e2a 360 SUPERFAMILY SSF75620 12 354 2.09E-132 T 15-10-2018 THII_2840 14849634b57321332b6e3910964c8e2a 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.791 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 THII_2840 14849634b57321332b6e3910964c8e2a 360 SMART SM00937 65 180 3.6E-61 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 THII_2840 14849634b57321332b6e3910964c8e2a 360 Gene3D G3DSA:3.30.160.20 212 299 3.7E-97 T 15-10-2018 THII_2840 14849634b57321332b6e3910964c8e2a 360 Pfam PF03462 PCRF domain 13 205 8.0E-71 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 THII_3054 ec3fee71358a816c199651adc261d17b 1666 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 542 594 8.1E-8 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_3054 ec3fee71358a816c199651adc261d17b 1666 Pfam PF01345 Domain of unknown function DUF11 540 643 7.8E-8 T 15-10-2018 IPR001434 Domain of unknown function DUF11 THII_1341 eaf5cf5c88d35b2de86ee7e6368e9ee4 280 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 15 232 2.0E-66 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 THII_1341 eaf5cf5c88d35b2de86ee7e6368e9ee4 280 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 160 188 3.9E-44 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 THII_1341 eaf5cf5c88d35b2de86ee7e6368e9ee4 280 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 13 40 3.9E-44 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 THII_1341 eaf5cf5c88d35b2de86ee7e6368e9ee4 280 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 91 109 3.9E-44 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 THII_1341 eaf5cf5c88d35b2de86ee7e6368e9ee4 280 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 109 135 3.9E-44 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 THII_1341 eaf5cf5c88d35b2de86ee7e6368e9ee4 280 ProSitePatterns PS01218 TatC family signature. 160 179 - T 15-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site THII_1341 eaf5cf5c88d35b2de86ee7e6368e9ee4 280 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 245 15.661 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 THII_1341 eaf5cf5c88d35b2de86ee7e6368e9ee4 280 Pfam PF00902 Sec-independent protein translocase protein (TatC) 16 227 1.6E-60 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 THII_3068 2d94d2f62f6d2ce69ba1109212f11551 444 SUPERFAMILY SSF116878 121 444 1.7E-47 T 15-10-2018 THII_3068 2d94d2f62f6d2ce69ba1109212f11551 444 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 120 2.6E-36 T 15-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 THII_3068 2d94d2f62f6d2ce69ba1109212f11551 444 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 444 1.6E-103 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 THII_3068 2d94d2f62f6d2ce69ba1109212f11551 444 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 335 1.3E-21 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_3068 2d94d2f62f6d2ce69ba1109212f11551 444 Gene3D G3DSA:1.20.120.430 122 444 1.6E-101 T 15-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 THII_3068 2d94d2f62f6d2ce69ba1109212f11551 444 Gene3D G3DSA:3.30.1360.120 1 121 4.5E-40 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 THII_3068 2d94d2f62f6d2ce69ba1109212f11551 444 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 444 32.76 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 THII_3068 2d94d2f62f6d2ce69ba1109212f11551 444 Pfam PF12631 MnmE helical domain 123 441 1.1E-57 T 15-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 THII_3068 2d94d2f62f6d2ce69ba1109212f11551 444 Pfam PF01926 50S ribosome-binding GTPase 218 317 3.9E-22 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_3068 2d94d2f62f6d2ce69ba1109212f11551 444 Gene3D G3DSA:3.40.50.300 217 373 1.6E-101 T 15-10-2018 THII_3068 2d94d2f62f6d2ce69ba1109212f11551 444 SUPERFAMILY SSF52540 72 363 6.9E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3491 341259a4aa79e3475468ff5e944b73b1 486 SUPERFAMILY SSF53756 6 485 2.29E-121 T 15-10-2018 THII_3491 341259a4aa79e3475468ff5e944b73b1 486 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 44.687 T 15-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 THII_3491 341259a4aa79e3475468ff5e944b73b1 486 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 483 2.2E-174 T 15-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 THII_3491 341259a4aa79e3475468ff5e944b73b1 486 Pfam PF00534 Glycosyl transferases group 1 297 446 8.7E-15 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_3491 341259a4aa79e3475468ff5e944b73b1 486 Gene3D G3DSA:3.40.50.2000 256 467 2.1E-180 T 15-10-2018 THII_3491 341259a4aa79e3475468ff5e944b73b1 486 Pfam PF08323 Starch synthase catalytic domain 7 242 5.2E-68 T 15-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 THII_3491 341259a4aa79e3475468ff5e944b73b1 486 Gene3D G3DSA:3.40.50.2000 8 481 2.1E-180 T 15-10-2018 THII_3312 60e00f88a10695de94da0f0683878ee9 119 SMART SM00961 18 115 3.8E-50 T 15-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_3312 60e00f88a10695de94da0f0683878ee9 119 SUPERFAMILY SSF55239 12 115 1.23E-42 T 15-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_3312 60e00f88a10695de94da0f0683878ee9 119 Gene3D G3DSA:3.30.190.10 1 116 6.4E-45 T 15-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_3312 60e00f88a10695de94da0f0683878ee9 119 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 19 114 1.6E-40 T 15-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_1127 b2d888e5291694f41b9d0b3826da283d 642 Pfam PF13672 Protein phosphatase 2C 282 524 7.6E-33 T 15-10-2018 THII_1127 b2d888e5291694f41b9d0b3826da283d 642 Gene3D G3DSA:3.60.40.10 273 512 2.1E-5 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_1711 69e6080783448391f0e1da4d2a620826 217 Gene3D G3DSA:3.40.50.150 40 209 8.6E-41 T 15-10-2018 THII_1711 69e6080783448391f0e1da4d2a620826 217 SUPERFAMILY SSF53335 22 201 5.63E-40 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1711 69e6080783448391f0e1da4d2a620826 217 Pfam PF13489 Methyltransferase domain 42 195 1.3E-23 T 15-10-2018 THII_2326 fc27ab729b6710fe8abdf1dc200a481a 273 Gene3D G3DSA:1.20.120.1760 15 162 2.4E-14 T 15-10-2018 THII_2326 fc27ab729b6710fe8abdf1dc200a481a 273 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 61 83 - T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 THII_2326 fc27ab729b6710fe8abdf1dc200a481a 273 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 27 194 1.9E-35 T 15-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 THII_2326 fc27ab729b6710fe8abdf1dc200a481a 273 Pfam PF01066 CDP-alcohol phosphatidyltransferase 20 83 6.4E-14 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 THII_2048 ef2dc6651b5e1e8693de1cc82d376f54 354 SUPERFAMILY SSF50494 10 265 4.71E-76 T 15-10-2018 IPR009003 Peptidase S1, PA clan THII_2048 ef2dc6651b5e1e8693de1cc82d376f54 354 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 211 223 1.1E-17 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 THII_2048 ef2dc6651b5e1e8693de1cc82d376f54 354 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 65 80 1.1E-17 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 THII_2048 ef2dc6651b5e1e8693de1cc82d376f54 354 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 120 134 1.1E-17 T 15-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 THII_2048 ef2dc6651b5e1e8693de1cc82d376f54 354 Gene3D G3DSA:2.40.10.10 28 267 1.8E-71 T 15-10-2018 THII_2048 ef2dc6651b5e1e8693de1cc82d376f54 354 Pfam PF00089 Trypsin 34 262 1.4E-60 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 THII_2048 ef2dc6651b5e1e8693de1cc82d376f54 354 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 212 223 - T 15-10-2018 IPR033116 Serine proteases, trypsin family, serine active site THII_2048 ef2dc6651b5e1e8693de1cc82d376f54 354 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 75 80 - T 15-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 THII_2048 ef2dc6651b5e1e8693de1cc82d376f54 354 SMART SM00020 33 262 4.2E-83 T 15-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 THII_3899 18f9f2e38d22f1641cecef48606eea02 272 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 272 157.544 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 THII_3899 18f9f2e38d22f1641cecef48606eea02 272 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 9 269 2.1E-139 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 THII_3899 18f9f2e38d22f1641cecef48606eea02 272 SUPERFAMILY SSF56276 48 181 1.61E-23 T 15-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 THII_3899 18f9f2e38d22f1641cecef48606eea02 272 PIRSF PIRSF001356 4 271 3.2E-137 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 THII_3899 18f9f2e38d22f1641cecef48606eea02 272 Pfam PF02675 S-adenosylmethionine decarboxylase 44 177 9.7E-30 T 15-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 THII_3899 18f9f2e38d22f1641cecef48606eea02 272 Gene3D G3DSA:3.60.90.10 111 193 5.7E-7 T 15-10-2018 THII_1463 69644f34095c14035422da7b2f3f0125 1177 Pfam PF00924 Mechanosensitive ion channel 959 1158 9.6E-53 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 THII_1463 69644f34095c14035422da7b2f3f0125 1177 SUPERFAMILY SSF82861 916 999 3.53E-11 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 THII_1463 69644f34095c14035422da7b2f3f0125 1177 SUPERFAMILY SSF82689 1071 1169 3.27E-25 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 THII_1463 69644f34095c14035422da7b2f3f0125 1177 Gene3D G3DSA:3.30.70.100 1070 1163 4.8E-22 T 15-10-2018 THII_1463 69644f34095c14035422da7b2f3f0125 1177 Gene3D G3DSA:2.30.30.60 1016 1066 1.2E-10 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily THII_1463 69644f34095c14035422da7b2f3f0125 1177 SUPERFAMILY SSF50182 1001 1067 1.08E-15 T 15-10-2018 IPR010920 LSM domain superfamily THII_2131 d3cb54207aa41dd62077fb26e61d488e 258 Pfam PF05685 Putative restriction endonuclease 24 200 2.1E-17 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3391 f18962764a944a5055791ee76fb48c9c 280 SUPERFAMILY SSF51735 6 252 2.57E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3391 f18962764a944a5055791ee76fb48c9c 280 Gene3D G3DSA:3.40.50.720 7 268 5.6E-57 T 15-10-2018 THII_3391 f18962764a944a5055791ee76fb48c9c 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.1E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3391 f18962764a944a5055791ee76fb48c9c 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 9.1E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3391 f18962764a944a5055791ee76fb48c9c 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 9.1E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3391 f18962764a944a5055791ee76fb48c9c 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 9.1E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3391 f18962764a944a5055791ee76fb48c9c 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 9.1E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3391 f18962764a944a5055791ee76fb48c9c 280 Pfam PF00106 short chain dehydrogenase 8 190 1.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3391 f18962764a944a5055791ee76fb48c9c 280 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 THII_0512 798c4d6c4f50a5eca6d8ba773c847c7e 211 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 202 24.385 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0512 798c4d6c4f50a5eca6d8ba773c847c7e 211 SUPERFAMILY SSF75625 2 209 2.09E-72 T 15-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0512 798c4d6c4f50a5eca6d8ba773c847c7e 211 Gene3D G3DSA:3.30.70.980 49 199 3.5E-50 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0512 798c4d6c4f50a5eca6d8ba773c847c7e 211 Gene3D G3DSA:1.10.10.200 1 43 1.9E-15 T 15-10-2018 IPR017856 Integrase-like, N-terminal THII_0512 798c4d6c4f50a5eca6d8ba773c847c7e 211 Gene3D G3DSA:3.30.70.980 93 168 3.5E-50 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0512 798c4d6c4f50a5eca6d8ba773c847c7e 211 Pfam PF01709 Transcriptional regulator 3 200 5.6E-72 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0512 798c4d6c4f50a5eca6d8ba773c847c7e 211 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 200 4.1E-73 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1233 76854a1795ac93317ef419380c77eced 355 TIGRFAM TIGR01836 PHA_synth_III_C: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 6 354 2.7E-168 T 15-10-2018 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit GO:0016746|GO:0042619 THII_1233 76854a1795ac93317ef419380c77eced 355 SUPERFAMILY SSF53474 51 352 2.41E-36 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1233 76854a1795ac93317ef419380c77eced 355 Pfam PF00561 alpha/beta hydrolase fold 68 334 3.1E-29 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_1664 399fd514dc6ed66f997b95daaaa26f03 617 SUPERFAMILY SSF52540 377 615 3.37E-80 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1664 399fd514dc6ed66f997b95daaaa26f03 617 SMART SM00382 406 607 1.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1664 399fd514dc6ed66f997b95daaaa26f03 617 Gene3D G3DSA:1.20.1560.10 32 360 4.7E-51 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 THII_1664 399fd514dc6ed66f997b95daaaa26f03 617 Gene3D G3DSA:3.40.50.300 373 617 1.0E-82 T 15-10-2018 THII_1664 399fd514dc6ed66f997b95daaaa26f03 617 Pfam PF00664 ABC transporter transmembrane region 46 334 5.4E-28 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 THII_1664 399fd514dc6ed66f997b95daaaa26f03 617 SUPERFAMILY SSF90123 34 359 1.05E-51 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 THII_1664 399fd514dc6ed66f997b95daaaa26f03 617 ProSitePatterns PS00211 ABC transporters family signature. 517 531 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_1664 399fd514dc6ed66f997b95daaaa26f03 617 Pfam PF00005 ABC transporter 397 545 1.6E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_3613 a1f7489776c66e594969987f684565c2 218 Gene3D G3DSA:3.40.50.150 30 215 4.0E-59 T 15-10-2018 THII_3613 a1f7489776c66e594969987f684565c2 218 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.216 T 15-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 THII_3613 a1f7489776c66e594969987f684565c2 218 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.1E-55 T 15-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 THII_3613 a1f7489776c66e594969987f684565c2 218 PIRSF PIRSF005461 1 217 6.8E-76 T 15-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 THII_3613 a1f7489776c66e594969987f684565c2 218 SUPERFAMILY SSF53335 30 208 1.25E-37 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2673 e6c3f7b664f1ac87a036bc191e8046eb 823 SUPERFAMILY SSF53187 351 789 4.72E-67 T 15-10-2018 THII_2673 e6c3f7b664f1ac87a036bc191e8046eb 823 SUPERFAMILY SSF75011 63 288 4.58E-6 T 15-10-2018 THII_2673 e6c3f7b664f1ac87a036bc191e8046eb 823 Gene3D G3DSA:3.50.30.30 410 559 4.0E-80 T 15-10-2018 THII_2673 e6c3f7b664f1ac87a036bc191e8046eb 823 Pfam PF02225 PA domain 455 543 3.9E-13 T 15-10-2018 IPR003137 PA domain THII_2673 e6c3f7b664f1ac87a036bc191e8046eb 823 Gene3D G3DSA:3.40.630.10 371 777 4.0E-80 T 15-10-2018 THII_2673 e6c3f7b664f1ac87a036bc191e8046eb 823 Pfam PF04389 Peptidase family M28 569 783 6.3E-46 T 15-10-2018 IPR007484 Peptidase M28 THII_2673 e6c3f7b664f1ac87a036bc191e8046eb 823 SUPERFAMILY SSF52025 424 537 3.92E-13 T 15-10-2018 THII_1846 70d2f5e4885b6320127e7e9ee2112439 819 SUPERFAMILY SSF51206 695 804 1.19E-25 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like THII_1846 70d2f5e4885b6320127e7e9ee2112439 819 Pfam PF00027 Cyclic nucleotide-binding domain 722 804 1.5E-14 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_1846 70d2f5e4885b6320127e7e9ee2112439 819 Gene3D G3DSA:2.60.120.10 688 817 6.2E-27 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_1846 70d2f5e4885b6320127e7e9ee2112439 819 SMART SM00100 703 818 6.5E-13 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_1846 70d2f5e4885b6320127e7e9ee2112439 819 Pfam PF00999 Sodium/hydrogen exchanger family 15 402 7.8E-57 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 THII_2508 3e1cd6642186b8fb1f56a865a6df024c 113 Pfam PF02754 Cysteine-rich domain 3 61 1.3E-10 T 15-10-2018 IPR004017 Cysteine-rich domain THII_2049 7e45b38aaa4178dc1b7331e0ac3d9a38 1716 SMART SM00490 1034 1133 7.1E-12 T 15-10-2018 IPR001650 Helicase, C-terminal THII_2049 7e45b38aaa4178dc1b7331e0ac3d9a38 1716 SUPERFAMILY SSF52540 155 1149 9.25E-29 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2049 7e45b38aaa4178dc1b7331e0ac3d9a38 1716 Gene3D G3DSA:3.40.50.300 1027 1146 4.4E-16 T 15-10-2018 THII_2049 7e45b38aaa4178dc1b7331e0ac3d9a38 1716 Pfam PF00271 Helicase conserved C-terminal domain 1068 1131 5.0E-9 T 15-10-2018 IPR001650 Helicase, C-terminal THII_2049 7e45b38aaa4178dc1b7331e0ac3d9a38 1716 Pfam PF09369 Domain of unknown function (DUF1998) 1610 1691 5.0E-6 T 15-10-2018 IPR018973 DEAD/DEAH-box helicase, putative THII_2049 7e45b38aaa4178dc1b7331e0ac3d9a38 1716 SMART SM00487 95 345 1.7E-20 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_2049 7e45b38aaa4178dc1b7331e0ac3d9a38 1716 Pfam PF00270 DEAD/DEAH box helicase 120 311 1.4E-17 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 THII_0205 8d051f18db7637c251f2a2d67bbfcbdc 230 SUPERFAMILY SSF52980 17 197 2.14E-31 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0205 8d051f18db7637c251f2a2d67bbfcbdc 230 Pfam PF05685 Putative restriction endonuclease 28 194 9.9E-31 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0205 8d051f18db7637c251f2a2d67bbfcbdc 230 Gene3D G3DSA:3.90.1570.10 21 199 2.9E-14 T 15-10-2018 THII_2352 d63be1ebc706a89d0df1e8ee75f36030 288 Gene3D G3DSA:3.20.20.70 121 267 5.3E-118 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2352 d63be1ebc706a89d0df1e8ee75f36030 288 PIRSF PIRSF006250 5 280 6.2E-106 T 15-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 THII_2352 d63be1ebc706a89d0df1e8ee75f36030 288 SUPERFAMILY SSF54675 7 111 1.35E-33 T 15-10-2018 THII_2352 d63be1ebc706a89d0df1e8ee75f36030 288 Gene3D G3DSA:3.90.1170.20 8 276 5.3E-118 T 15-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 THII_2352 d63be1ebc706a89d0df1e8ee75f36030 288 SUPERFAMILY SSF51690 113 277 1.14E-60 T 15-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 THII_2352 d63be1ebc706a89d0df1e8ee75f36030 288 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 23 110 1.3E-28 T 15-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 THII_2352 d63be1ebc706a89d0df1e8ee75f36030 288 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 277 1.1E-101 T 15-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 THII_2352 d63be1ebc706a89d0df1e8ee75f36030 288 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 113 276 3.2E-60 T 15-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 THII_1595 e5befa8672aef66ad41858556666d819 249 Pfam PF01209 ubiE/COQ5 methyltransferase family 21 248 6.1E-91 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 THII_1595 e5befa8672aef66ad41858556666d819 249 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 248 3.5E-82 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 THII_1595 e5befa8672aef66ad41858556666d819 249 Gene3D G3DSA:3.40.50.150 31 249 4.4E-70 T 15-10-2018 THII_1595 e5befa8672aef66ad41858556666d819 249 SUPERFAMILY SSF53335 17 247 3.86E-47 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1595 e5befa8672aef66ad41858556666d819 249 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 248 37.605 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 THII_1595 e5befa8672aef66ad41858556666d819 249 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 15-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 THII_0968 8da0737e88315cf95f395fbd5639da14 695 Pfam PF00072 Response regulator receiver domain 430 538 1.6E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0968 8da0737e88315cf95f395fbd5639da14 695 Pfam PF00072 Response regulator receiver domain 551 662 1.6E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0968 8da0737e88315cf95f395fbd5639da14 695 Pfam PF00072 Response regulator receiver domain 8 120 4.7E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0968 8da0737e88315cf95f395fbd5639da14 695 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 291 402 1.8E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0968 8da0737e88315cf95f395fbd5639da14 695 Gene3D G3DSA:3.40.50.2300 547 688 4.4E-30 T 15-10-2018 THII_0968 8da0737e88315cf95f395fbd5639da14 695 SUPERFAMILY SSF55874 231 402 7.6E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0968 8da0737e88315cf95f395fbd5639da14 695 Gene3D G3DSA:1.10.287.130 138 240 9.3E-29 T 15-10-2018 THII_0968 8da0737e88315cf95f395fbd5639da14 695 Gene3D G3DSA:3.40.50.12740 427 546 1.9E-33 T 15-10-2018 THII_0968 8da0737e88315cf95f395fbd5639da14 695 SUPERFAMILY SSF52172 550 682 2.85E-27 T 15-10-2018 IPR011006 CheY-like superfamily THII_0968 8da0737e88315cf95f395fbd5639da14 695 SUPERFAMILY SSF47384 159 244 1.08E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0968 8da0737e88315cf95f395fbd5639da14 695 Gene3D G3DSA:3.30.565.10 241 407 4.0E-50 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0968 8da0737e88315cf95f395fbd5639da14 695 SUPERFAMILY SSF52172 430 541 1.57E-31 T 15-10-2018 IPR011006 CheY-like superfamily THII_0968 8da0737e88315cf95f395fbd5639da14 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 382 1.4E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0968 8da0737e88315cf95f395fbd5639da14 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 357 1.4E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0968 8da0737e88315cf95f395fbd5639da14 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 343 1.4E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0968 8da0737e88315cf95f395fbd5639da14 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 401 1.4E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0968 8da0737e88315cf95f395fbd5639da14 695 SMART SM00448 549 663 1.5E-18 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0968 8da0737e88315cf95f395fbd5639da14 695 SMART SM00448 6 119 5.3E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0968 8da0737e88315cf95f395fbd5639da14 695 SMART SM00448 428 538 2.2E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0968 8da0737e88315cf95f395fbd5639da14 695 Pfam PF00512 His Kinase A (phospho-acceptor) domain 174 242 7.6E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0968 8da0737e88315cf95f395fbd5639da14 695 SUPERFAMILY SSF52172 4 150 6.97E-40 T 15-10-2018 IPR011006 CheY-like superfamily THII_0968 8da0737e88315cf95f395fbd5639da14 695 SMART SM00387 288 404 6.8E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0968 8da0737e88315cf95f395fbd5639da14 695 SMART SM00388 174 242 9.0E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0968 8da0737e88315cf95f395fbd5639da14 695 Gene3D G3DSA:3.40.50.2300 2 137 1.7E-38 T 15-10-2018 THII_1948 db939bfb25c980cde0a748812169aab5 140 Pfam PF09413 Putative prokaryotic signal transducing protein 5 68 6.2E-6 T 15-10-2018 IPR018551 Domain of unknown function DUF2007 THII_0873 6768077ff961f204b0f11435b3896449 505 Pfam PF13676 TIR domain 30 121 5.2E-8 T 15-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 THII_0873 6768077ff961f204b0f11435b3896449 505 SUPERFAMILY SSF52200 7 142 1.03E-13 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_0873 6768077ff961f204b0f11435b3896449 505 Gene3D G3DSA:3.40.50.10140 5 147 4.1E-17 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_1076 034dd1e9e2b8d3d79888d10937064fbc 112 Gene3D G3DSA:2.160.10.10 1 110 8.3E-21 T 15-10-2018 THII_1076 034dd1e9e2b8d3d79888d10937064fbc 112 SUPERFAMILY SSF51161 36 99 1.37E-18 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 SMART SM00363 337 399 2.0E-4 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 48.332 T 15-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 SUPERFAMILY SSF55174 321 398 2.75E-18 T 15-10-2018 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 Pfam PF01479 S4 domain 341 373 3.2E-6 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 Pfam PF00579 tRNA synthetases class I (W and Y) 32 317 2.2E-79 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 2.7E-26 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.7E-26 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.7E-26 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 2.7E-26 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 Gene3D G3DSA:3.10.290.10 325 398 2.8E-22 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 Gene3D G3DSA:3.40.50.620 5 217 1.3E-72 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 Gene3D G3DSA:1.10.240.10 222 324 1.2E-19 T 15-10-2018 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 398 4.6E-125 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 THII_1029 2f811a14c18fd73d1319dcf750f0e789 402 SUPERFAMILY SSF52374 4 316 2.28E-96 T 15-10-2018 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 3.2E-26 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 3.2E-26 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.2E-26 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.2E-26 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.2E-26 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 Gene3D G3DSA:3.40.50.620 2 314 4.8E-136 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1876 ce0314d576a13756bd53b1719b8b3935 469 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.636 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 305 5.8E-110 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 SUPERFAMILY SSF48163 299 461 3.01E-42 T 15-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 SUPERFAMILY SSF52374 3 298 5.36E-113 T 15-10-2018 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 Gene3D G3DSA:1.10.10.350 366 467 3.0E-25 T 15-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 THII_1876 ce0314d576a13756bd53b1719b8b3935 469 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 461 2.5E-188 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 THII_3905 8b7d8b040a84ae4f442eeb2220117391 332 Gene3D G3DSA:3.30.930.10 72 270 8.0E-51 T 15-10-2018 THII_3905 8b7d8b040a84ae4f442eeb2220117391 332 SUPERFAMILY SSF50037 297 330 7.32E-5 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal THII_3905 8b7d8b040a84ae4f442eeb2220117391 332 Pfam PF03099 Biotin/lipoate A/B protein ligase family 87 207 7.4E-11 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 THII_3905 8b7d8b040a84ae4f442eeb2220117391 332 SUPERFAMILY SSF55681 74 268 6.13E-46 T 15-10-2018 THII_3905 8b7d8b040a84ae4f442eeb2220117391 332 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 327 6.3E-46 T 15-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 THII_3905 8b7d8b040a84ae4f442eeb2220117391 332 Gene3D G3DSA:2.30.30.100 285 332 2.0E-6 T 15-10-2018 THII_3905 8b7d8b040a84ae4f442eeb2220117391 332 Gene3D G3DSA:1.10.10.10 2 59 3.2E-5 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1103 4525effa4b9b82ca3da7769a38353db1 172 SMART SM01321 8 126 8.6E-36 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_1103 4525effa4b9b82ca3da7769a38353db1 172 Pfam PF01797 Transposase IS200 like 12 124 1.5E-8 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_1103 4525effa4b9b82ca3da7769a38353db1 172 Gene3D G3DSA:3.30.70.1290 1 169 3.0E-44 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_1103 4525effa4b9b82ca3da7769a38353db1 172 SUPERFAMILY SSF143422 1 132 1.31E-32 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_3706 c3a56954164c97bec405dadd5b65ee5d 90 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 9.3E-25 T 15-10-2018 IPR000504 RNA recognition motif domain GO:0003676 THII_3706 c3a56954164c97bec405dadd5b65ee5d 90 Gene3D G3DSA:3.30.70.330 1 90 9.5E-32 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily THII_3706 c3a56954164c97bec405dadd5b65ee5d 90 SMART SM00360 2 75 8.7E-29 T 15-10-2018 IPR000504 RNA recognition motif domain GO:0003676 THII_3706 c3a56954164c97bec405dadd5b65ee5d 90 SUPERFAMILY SSF54928 2 89 9.81E-33 T 15-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 THII_0509 3929ce6cc3126dcd0b5788ad17d0bd55 843 Pfam PF02384 N-6 DNA Methylase 224 455 5.1E-18 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 THII_0509 3929ce6cc3126dcd0b5788ad17d0bd55 843 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 376 400 6.4E-20 T 15-10-2018 THII_0509 3929ce6cc3126dcd0b5788ad17d0bd55 843 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 225 239 6.4E-20 T 15-10-2018 THII_0509 3929ce6cc3126dcd0b5788ad17d0bd55 843 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 157 173 6.4E-20 T 15-10-2018 THII_0509 3929ce6cc3126dcd0b5788ad17d0bd55 843 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 342 354 6.4E-20 T 15-10-2018 THII_0509 3929ce6cc3126dcd0b5788ad17d0bd55 843 Pfam PF12950 TaqI-like C-terminal specificity domain 553 713 1.9E-20 T 15-10-2018 IPR025931 TaqI-like C-terminal specificity domain THII_0509 3929ce6cc3126dcd0b5788ad17d0bd55 843 SUPERFAMILY SSF53335 21 457 7.29E-68 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0509 3929ce6cc3126dcd0b5788ad17d0bd55 843 Gene3D G3DSA:3.40.50.150 120 508 1.9E-59 T 15-10-2018 THII_0509 3929ce6cc3126dcd0b5788ad17d0bd55 843 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 345 351 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 THII_3769 e9175a82e85967d672bdd2db71f16eb6 237 Gene3D G3DSA:1.10.287.950 65 205 5.0E-6 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 681 697 - T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_1782 ca1143467271751b743694fdd52326f1 830 Gene3D G3DSA:3.30.390.30 315 395 4.8E-7 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 THII_1782 ca1143467271751b743694fdd52326f1 830 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 624 5.8E-13 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_1782 ca1143467271751b743694fdd52326f1 830 Gene3D G3DSA:3.50.50.60 109 243 2.2E-89 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1782 ca1143467271751b743694fdd52326f1 830 SUPERFAMILY SSF55124 517 643 3.27E-25 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_1782 ca1143467271751b743694fdd52326f1 830 Gene3D G3DSA:3.90.480.10 547 637 1.4E-5 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 5.4E-11 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 5.4E-11 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 5.4E-11 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 5.4E-11 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 PRINTS PR00397 Sirohaem Fe-binding site signature 681 699 1.8E-6 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_1782 ca1143467271751b743694fdd52326f1 830 PRINTS PR00397 Sirohaem Fe-binding site signature 638 656 1.8E-6 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_1782 ca1143467271751b743694fdd52326f1 830 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 768 1.3E-26 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 THII_1782 ca1143467271751b743694fdd52326f1 830 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 279 1.3E-54 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_1782 ca1143467271751b743694fdd52326f1 830 SUPERFAMILY SSF51905 3 189 5.73E-41 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1782 ca1143467271751b743694fdd52326f1 830 Gene3D G3DSA:3.50.50.60 6 279 2.2E-89 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1782 ca1143467271751b743694fdd52326f1 830 PIRSF PIRSF037149 1 829 0.0 T 15-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 THII_1782 ca1143467271751b743694fdd52326f1 830 SUPERFAMILY SSF51905 147 305 8.49E-28 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1782 ca1143467271751b743694fdd52326f1 830 Gene3D G3DSA:3.30.413.10 638 791 2.3E-37 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 5 784 1.2E-288 T 15-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 THII_1782 ca1143467271751b743694fdd52326f1 830 Pfam PF04324 BFD-like [2Fe-2S] binding domain 486 535 4.6E-13 T 15-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain THII_1782 ca1143467271751b743694fdd52326f1 830 Pfam PF04324 BFD-like [2Fe-2S] binding domain 422 470 2.6E-13 T 15-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain THII_1782 ca1143467271751b743694fdd52326f1 830 SUPERFAMILY SSF56014 635 788 1.16E-51 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 Gene3D G3DSA:1.10.10.1100 421 476 1.8E-8 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 2.4E-19 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 2.4E-19 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.4E-19 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.4E-19 T 15-10-2018 THII_1782 ca1143467271751b743694fdd52326f1 830 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 2.4E-19 T 15-10-2018 THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.6E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.6E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.6E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.6E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.6E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.6E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 SUPERFAMILY SSF51735 10 248 6.14E-69 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 Gene3D G3DSA:3.40.50.720 3 250 3.6E-68 T 15-10-2018 THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 246 4.4E-49 T 15-10-2018 THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.6E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.6E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_0394 a1baf71bdfd58b0516ecf8c25d58af1e 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 2.6E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2109 8718848adfcea84536b5ec39c3450bde 274 Gene3D G3DSA:3.40.50.300 9 257 1.0E-62 T 15-10-2018 THII_2109 8718848adfcea84536b5ec39c3450bde 274 SMART SM00382 36 231 8.8E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2109 8718848adfcea84536b5ec39c3450bde 274 SUPERFAMILY SSF52540 10 239 4.69E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2109 8718848adfcea84536b5ec39c3450bde 274 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_2109 8718848adfcea84536b5ec39c3450bde 274 Pfam PF00005 ABC transporter 28 175 1.1E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2436 f9fb10d3b2286755afcf27f120d49954 139 SUPERFAMILY SSF52980 1 138 9.65E-18 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2436 f9fb10d3b2286755afcf27f120d49954 139 Gene3D G3DSA:3.90.1570.10 1 139 2.2E-22 T 15-10-2018 THII_2436 f9fb10d3b2286755afcf27f120d49954 139 Pfam PF05685 Putative restriction endonuclease 2 112 6.0E-15 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 235 487 1.7E-67 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 15 213 4.5E-47 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 Pfam PF01256 Carbohydrate kinase 251 485 8.2E-60 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 228 497 21.81 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 433 443 - T 15-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 PIRSF PIRSF017184 8 496 1.3E-136 T 15-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 Pfam PF03853 YjeF-related protein N-terminus 33 192 1.1E-42 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 SUPERFAMILY SSF53613 225 491 2.73E-74 T 15-10-2018 IPR029056 Ribokinase-like THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 12 213 25.914 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 SUPERFAMILY SSF64153 9 250 3.27E-65 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 Gene3D G3DSA:3.40.1190.20 226 495 1.2E-83 T 15-10-2018 IPR029056 Ribokinase-like THII_3660 6acb51dee44d40211d9ee23b2dc221fa 499 Gene3D G3DSA:3.40.50.10260 8 220 7.4E-65 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 SMART SM00388 363 431 3.1E-25 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 SMART SM00387 477 622 2.8E-36 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 Pfam PF00512 His Kinase A (phospho-acceptor) domain 364 431 1.5E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 Gene3D G3DSA:1.10.287.130 347 432 1.4E-27 T 15-10-2018 THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 SUPERFAMILY SSF47384 351 433 2.35E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 1.3E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 619 1.3E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 575 1.3E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 561 1.3E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 Pfam PF05228 CHASE4 domain 48 197 4.4E-32 T 15-10-2018 IPR007892 CHASE4 THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 Gene3D G3DSA:3.30.565.10 433 626 3.3E-53 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 620 2.9E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3648 5499c4472c611ad8a9dc61c864d1c43b 659 SUPERFAMILY SSF55874 420 624 1.94E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0903 8aa8c5cde03047b6ee418d24fc97e0ba 496 Gene3D G3DSA:3.50.80.20 103 189 3.8E-19 T 15-10-2018 THII_0903 8aa8c5cde03047b6ee418d24fc97e0ba 496 Gene3D G3DSA:3.40.710.10 36 102 1.4E-5 T 15-10-2018 THII_0903 8aa8c5cde03047b6ee418d24fc97e0ba 496 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 38 477 4.2E-99 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_0903 8aa8c5cde03047b6ee418d24fc97e0ba 496 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 62 461 2.3E-91 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_0903 8aa8c5cde03047b6ee418d24fc97e0ba 496 SUPERFAMILY SSF56601 44 484 4.43E-87 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like THII_0903 8aa8c5cde03047b6ee418d24fc97e0ba 496 Gene3D G3DSA:3.40.710.10 272 484 3.7E-53 T 15-10-2018 THII_0903 8aa8c5cde03047b6ee418d24fc97e0ba 496 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 375 389 3.2E-25 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_0903 8aa8c5cde03047b6ee418d24fc97e0ba 496 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 3.2E-25 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_0903 8aa8c5cde03047b6ee418d24fc97e0ba 496 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 438 451 3.2E-25 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_0903 8aa8c5cde03047b6ee418d24fc97e0ba 496 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 302 324 3.2E-25 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_0903 8aa8c5cde03047b6ee418d24fc97e0ba 496 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 74 93 3.2E-25 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_3080 70d7ad8cf2805a029b8fd2ab3c570d80 663 Pfam PF02540 NAD synthase 320 593 5.3E-31 T 15-10-2018 IPR022310 NAD/GMP synthase THII_3080 70d7ad8cf2805a029b8fd2ab3c570d80 663 SUPERFAMILY SSF56317 1 270 4.71E-39 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily THII_3080 70d7ad8cf2805a029b8fd2ab3c570d80 663 SUPERFAMILY SSF52402 305 625 7.33E-58 T 15-10-2018 THII_3080 70d7ad8cf2805a029b8fd2ab3c570d80 663 Gene3D G3DSA:3.40.50.620 311 659 8.2E-115 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3080 70d7ad8cf2805a029b8fd2ab3c570d80 663 Pfam PF00795 Carbon-nitrogen hydrolase 5 262 4.4E-17 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 THII_3080 70d7ad8cf2805a029b8fd2ab3c570d80 663 Gene3D G3DSA:3.60.110.10 1 275 2.9E-71 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily THII_3080 70d7ad8cf2805a029b8fd2ab3c570d80 663 TIGRFAM TIGR00552 nadE: NAD+ synthetase 324 618 7.2E-25 T 15-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 THII_3080 70d7ad8cf2805a029b8fd2ab3c570d80 663 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 644 26.14 T 15-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 THII_3080 70d7ad8cf2805a029b8fd2ab3c570d80 663 PIRSF PIRSF006630 1 644 1.8E-142 T 15-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 THII_2925 b97e0f9c8608d4a9ec0e480e518b6bb1 89 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 89 1.8E-21 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family THII_2925 b97e0f9c8608d4a9ec0e480e518b6bb1 89 PIRSF PIRSF006156 2 89 1.5E-23 T 15-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin THII_2925 b97e0f9c8608d4a9ec0e480e518b6bb1 89 SUPERFAMILY SSF143011 1 89 2.35E-23 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2925 b97e0f9c8608d4a9ec0e480e518b6bb1 89 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 4 89 7.5E-29 T 15-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin THII_2925 b97e0f9c8608d4a9ec0e480e518b6bb1 89 Gene3D G3DSA:3.30.2310.20 2 89 9.2E-31 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_3169 fc5243742ee2f7a503a82093e73bf477 885 Gene3D G3DSA:1.10.287.950 572 874 1.3E-78 T 15-10-2018 THII_3169 fc5243742ee2f7a503a82093e73bf477 885 Gene3D G3DSA:3.30.450.20 408 528 2.0E-32 T 15-10-2018 THII_3169 fc5243742ee2f7a503a82093e73bf477 885 Pfam PF08376 Nitrate and nitrite sensing 58 297 2.0E-34 T 15-10-2018 IPR013587 Nitrate/nitrite sensing protein THII_3169 fc5243742ee2f7a503a82093e73bf477 885 SUPERFAMILY SSF58104 592 873 4.71E-65 T 15-10-2018 THII_3169 fc5243742ee2f7a503a82093e73bf477 885 Gene3D G3DSA:1.20.1480.50 296 395 3.3E-10 T 15-10-2018 THII_3169 fc5243742ee2f7a503a82093e73bf477 885 SMART SM00304 572 624 0.16 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3169 fc5243742ee2f7a503a82093e73bf477 885 SMART SM00304 336 388 1.8E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3169 fc5243742ee2f7a503a82093e73bf477 885 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 684 840 7.3E-49 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_3169 fc5243742ee2f7a503a82093e73bf477 885 SUPERFAMILY SSF158472 338 386 1.22E-7 T 15-10-2018 THII_3169 fc5243742ee2f7a503a82093e73bf477 885 SMART SM00283 625 872 8.5E-82 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 SMART SM00304 299 351 4.0E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 SUPERFAMILY SSF158472 299 348 2.09E-8 T 15-10-2018 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 Gene3D G3DSA:1.10.287.130 480 559 4.8E-11 T 15-10-2018 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 Gene3D G3DSA:3.30.565.10 561 709 5.9E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2580 fea5c7519e1649cb1fb295005a34105a 713 Pfam PF00512 His Kinase A (phospho-acceptor) domain 492 558 1.2E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 Gene3D G3DSA:3.30.450.20 355 479 2.0E-10 T 15-10-2018 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 SMART SM00387 599 707 4.7E-33 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2580 fea5c7519e1649cb1fb295005a34105a 713 SUPERFAMILY SSF55874 557 705 1.83E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2580 fea5c7519e1649cb1fb295005a34105a 713 Pfam PF00672 HAMP domain 299 346 3.0E-8 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 Gene3D G3DSA:1.20.1480.50 270 354 4.1E-11 T 15-10-2018 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 668 1.7E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 654 1.7E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 687 1.7E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 PIRSF PIRSF037532 2 709 1.2E-197 T 15-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator THII_2580 fea5c7519e1649cb1fb295005a34105a 713 SUPERFAMILY SSF55785 357 480 1.56E-7 T 15-10-2018 IPR035965 PAS domain superfamily THII_2580 fea5c7519e1649cb1fb295005a34105a 713 SMART SM00388 490 562 4.9E-5 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 SUPERFAMILY SSF47384 486 559 2.55E-10 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2580 fea5c7519e1649cb1fb295005a34105a 713 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 600 706 9.9E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1012 a128b0e6bc8ed2687f7af82e8103e03c 172 Gene3D G3DSA:2.30.110.20 3 172 4.9E-46 T 15-10-2018 IPR036624 Hcp1-like superfamily THII_1012 a128b0e6bc8ed2687f7af82e8103e03c 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 155 2.2E-24 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp THII_1012 a128b0e6bc8ed2687f7af82e8103e03c 172 SUPERFAMILY SSF141452 2 170 6.15E-39 T 15-10-2018 IPR036624 Hcp1-like superfamily THII_1012 a128b0e6bc8ed2687f7af82e8103e03c 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 1.0E-33 T 15-10-2018 IPR008514 Type VI secretion system effector, Hcp THII_2424 16ae374c2c5096ec6ec04853f5b002bf 266 SUPERFAMILY SSF52540 26 223 1.85E-31 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2424 16ae374c2c5096ec6ec04853f5b002bf 266 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 181 264 6.2E-32 T 15-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal THII_2424 16ae374c2c5096ec6ec04853f5b002bf 266 Gene3D G3DSA:3.40.50.300 19 186 1.3E-30 T 15-10-2018 THII_2424 16ae374c2c5096ec6ec04853f5b002bf 266 Pfam PF07728 AAA domain (dynein-related subfamily) 34 168 6.2E-31 T 15-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 THII_3912 afbfcb1db95ceee9fb8399c6cf37f3e3 306 PIRSF PIRSF026649 7 302 7.3E-99 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 THII_3912 afbfcb1db95ceee9fb8399c6cf37f3e3 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 1 302 40.929 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 THII_3912 afbfcb1db95ceee9fb8399c6cf37f3e3 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 302 1.5E-98 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 THII_3912 afbfcb1db95ceee9fb8399c6cf37f3e3 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 292 6.4E-75 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 THII_2081 484542d34c5a255011ed7a37acf63d57 326 Gene3D G3DSA:3.30.470.20 116 297 1.3E-113 T 15-10-2018 THII_2081 484542d34c5a255011ed7a37acf63d57 326 Hamap MF_00162 Glutathione synthetase [gshB]. 1 318 167.997 T 15-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 THII_2081 484542d34c5a255011ed7a37acf63d57 326 TIGRFAM TIGR01380 glut_syn: glutathione synthase 4 314 6.9E-136 T 15-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 THII_2081 484542d34c5a255011ed7a37acf63d57 326 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 121 1.3E-46 T 15-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 THII_2081 484542d34c5a255011ed7a37acf63d57 326 SUPERFAMILY SSF52440 3 123 1.01E-45 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily THII_2081 484542d34c5a255011ed7a37acf63d57 326 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 298 3.6E-75 T 15-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 THII_2081 484542d34c5a255011ed7a37acf63d57 326 Gene3D G3DSA:3.40.50.20 8 115 1.3E-113 T 15-10-2018 THII_2081 484542d34c5a255011ed7a37acf63d57 326 SUPERFAMILY SSF56059 124 314 1.45E-53 T 15-10-2018 THII_2081 484542d34c5a255011ed7a37acf63d57 326 Gene3D G3DSA:3.30.1490.20 138 202 1.3E-113 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 THII_1717 f7278b4bd24eec103b72959ec7239c42 334 SUPERFAMILY SSF50129 1 152 7.76E-34 T 15-10-2018 IPR011032 GroES-like superfamily THII_1717 f7278b4bd24eec103b72959ec7239c42 334 Gene3D G3DSA:3.90.180.10 10 327 1.0E-98 T 15-10-2018 THII_1717 f7278b4bd24eec103b72959ec7239c42 334 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 147 168 - T 15-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 THII_1717 f7278b4bd24eec103b72959ec7239c42 334 SMART SM00829 10 331 1.7E-44 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 THII_1717 f7278b4bd24eec103b72959ec7239c42 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 88 1.8E-8 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 THII_1717 f7278b4bd24eec103b72959ec7239c42 334 Pfam PF13602 Zinc-binding dehydrogenase 190 331 2.3E-33 T 15-10-2018 THII_1717 f7278b4bd24eec103b72959ec7239c42 334 SUPERFAMILY SSF51735 119 243 1.21E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1717 f7278b4bd24eec103b72959ec7239c42 334 Gene3D G3DSA:3.40.50.720 130 277 1.0E-98 T 15-10-2018 THII_3419 d005bf0c374149dacc2c47248f87759d 360 Gene3D G3DSA:2.60.120.200 29 247 4.6E-39 T 15-10-2018 THII_3419 d005bf0c374149dacc2c47248f87759d 360 SUPERFAMILY SSF49899 28 248 2.05E-38 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily THII_3419 d005bf0c374149dacc2c47248f87759d 360 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 81 242 4.3E-23 T 15-10-2018 THII_0220 90080c96b144e7d9b6c2a8442e371f08 424 Gene3D G3DSA:3.40.50.450 42 314 3.4E-31 T 15-10-2018 THII_0220 90080c96b144e7d9b6c2a8442e371f08 424 SUPERFAMILY SSF102405 117 279 7.33E-18 T 15-10-2018 THII_0220 90080c96b144e7d9b6c2a8442e371f08 424 Pfam PF02481 DNA recombination-mediator protein A 96 297 2.0E-28 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 THII_1291 cd4af6be905f73d9a9348587e5a1fb14 127 SMART SM00960 11 101 0.0014 T 15-10-2018 IPR004942 Roadblock/LAMTOR2 domain THII_1291 cd4af6be905f73d9a9348587e5a1fb14 127 Gene3D G3DSA:3.30.450.30 1 127 2.7E-20 T 15-10-2018 THII_1291 cd4af6be905f73d9a9348587e5a1fb14 127 SUPERFAMILY SSF103196 6 125 1.53E-16 T 15-10-2018 THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 SUPERFAMILY SSF51126 13 686 1.28E-26 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 SUPERFAMILY SSF49785 618 757 2.21E-7 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 Gene3D G3DSA:2.160.20.10 20 122 1.5E-5 T 15-10-2018 IPR012334 Pectin lyase fold THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 Gene3D G3DSA:2.60.120.260 615 757 9.4E-12 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 Gene3D G3DSA:2.160.20.10 358 583 1.5E-16 T 15-10-2018 IPR012334 Pectin lyase fold THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 488 526 2.1E-5 T 15-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 Pfam PF13229 Right handed beta helix region 396 570 7.6E-14 T 15-10-2018 IPR039448 Right handed beta helix domain THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 SMART SM00710 305 326 590.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 SMART SM00710 282 304 1500.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 SMART SM00710 415 442 190.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 SMART SM00710 511 544 3300.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 SMART SM00710 327 349 4800.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 SMART SM00710 356 381 4100.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 SMART SM00710 392 414 7100.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0665 af74a5ca01ff606ba4e4a019b146927f 1948 SMART SM00710 488 510 3.2 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_3183 580799a4828f764e679517e183fb3cca 544 Gene3D G3DSA:3.80.10.10 33 190 2.0E-44 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3183 580799a4828f764e679517e183fb3cca 544 Gene3D G3DSA:2.130.10.10 346 544 1.6E-8 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3183 580799a4828f764e679517e183fb3cca 544 SMART SM00365 198 219 120.0 T 15-10-2018 THII_3183 580799a4828f764e679517e183fb3cca 544 SMART SM00365 126 152 150.0 T 15-10-2018 THII_3183 580799a4828f764e679517e183fb3cca 544 SMART SM00365 102 123 420.0 T 15-10-2018 THII_3183 580799a4828f764e679517e183fb3cca 544 SMART SM00365 222 248 32.0 T 15-10-2018 THII_3183 580799a4828f764e679517e183fb3cca 544 SUPERFAMILY SSF52058 41 296 5.87E-57 T 15-10-2018 THII_3183 580799a4828f764e679517e183fb3cca 544 Pfam PF13855 Leucine rich repeat 152 211 2.8E-9 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_3183 580799a4828f764e679517e183fb3cca 544 SMART SM00369 222 246 53.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3183 580799a4828f764e679517e183fb3cca 544 SMART SM00369 174 197 9.7 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3183 580799a4828f764e679517e183fb3cca 544 SMART SM00369 198 221 14.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3183 580799a4828f764e679517e183fb3cca 544 SMART SM00369 271 292 410.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3183 580799a4828f764e679517e183fb3cca 544 SMART SM00369 150 173 43.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3183 580799a4828f764e679517e183fb3cca 544 SMART SM00369 102 125 38.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3183 580799a4828f764e679517e183fb3cca 544 SMART SM00369 126 149 30.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3183 580799a4828f764e679517e183fb3cca 544 Gene3D G3DSA:3.80.10.10 191 313 8.1E-29 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3183 580799a4828f764e679517e183fb3cca 544 Pfam PF00560 Leucine Rich Repeat 104 126 0.22 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_3183 580799a4828f764e679517e183fb3cca 544 Pfam PF00560 Leucine Rich Repeat 128 150 0.33 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_3183 580799a4828f764e679517e183fb3cca 544 SUPERFAMILY SSF50969 327 542 2.28E-21 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 4.7E-160 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.4E-39 T 15-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 Gene3D G3DSA:3.40.50.300 4 278 1.1E-152 T 15-10-2018 THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 PIRSF PIRSF006641 1 363 1.9E-157 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.997 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 SUPERFAMILY SSF52540 3 301 1.96E-88 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 5.4E-23 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.1E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.1E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.1E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.1E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 SUPERFAMILY SSF81271 279 360 2.83E-36 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 Gene3D G3DSA:3.10.20.30 48 361 1.1E-152 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_2305 dbcb6b0ca02b5580d40ea6ad51a41a87 363 Gene3D G3DSA:1.10.150.300 113 200 1.1E-152 T 15-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 THII_0773 c3768dfbaf5fff0a7c1c68dac2a62eb0 328 Pfam PF01882 Protein of unknown function DUF58 221 299 1.1E-13 T 15-10-2018 IPR002881 Domain of unknown function DUF58 THII_1252 b0b329bd42e911fbce77ce47b3a9f3a8 154 Gene3D G3DSA:3.40.930.10 1 151 3.0E-48 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 THII_1252 b0b329bd42e911fbce77ce47b3a9f3a8 154 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 147 1.3E-43 T 15-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 THII_1252 b0b329bd42e911fbce77ce47b3a9f3a8 154 SUPERFAMILY SSF55804 1 149 2.22E-39 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 THII_1252 b0b329bd42e911fbce77ce47b3a9f3a8 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 2.5E-34 T 15-10-2018 IPR002178 PTS EIIA type-2 domain THII_1252 b0b329bd42e911fbce77ce47b3a9f3a8 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 15-10-2018 IPR002178 PTS EIIA type-2 domain THII_1551 adae87ecfb95904485b39ab1645ec86c 282 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 280 9.0E-39 T 15-10-2018 IPR010106 Recombination-promoting nuclease RpnA THII_1551 adae87ecfb95904485b39ab1645ec86c 282 Pfam PF12784 PD-(D/E)XK nuclease family transposase 7 233 4.2E-67 T 15-10-2018 THII_2928 d903bea2a8cab4f49890dad0161d4caa 271 SMART SM00100 12 130 1.6E-11 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_2928 d903bea2a8cab4f49890dad0161d4caa 271 Pfam PF00027 Cyclic nucleotide-binding domain 31 116 1.9E-16 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_2928 d903bea2a8cab4f49890dad0161d4caa 271 SUPERFAMILY SSF51206 6 141 1.28E-28 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like THII_2928 d903bea2a8cab4f49890dad0161d4caa 271 Gene3D G3DSA:2.60.120.10 3 146 8.2E-28 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_2928 d903bea2a8cab4f49890dad0161d4caa 271 Pfam PF06210 Protein of unknown function (DUF1003) 170 266 1.3E-33 T 15-10-2018 IPR010406 Protein of unknown function DUF1003 THII_1925 0e2c7d8189bfb6163559b80c742eaa02 152 SMART SM00260 1 138 2.9E-10 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1925 0e2c7d8189bfb6163559b80c742eaa02 152 Gene3D G3DSA:2.40.50.180 21 133 1.6E-20 T 15-10-2018 THII_1925 0e2c7d8189bfb6163559b80c742eaa02 152 Pfam PF01584 CheW-like domain 3 140 2.3E-24 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1925 0e2c7d8189bfb6163559b80c742eaa02 152 SUPERFAMILY SSF50341 3 142 1.83E-26 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_1925 0e2c7d8189bfb6163559b80c742eaa02 152 Gene3D G3DSA:2.30.30.40 4 132 1.6E-20 T 15-10-2018 THII_1924 7607eaaeaaee46bc7b58257705ac941a 561 SMART SM00283 291 559 1.2E-38 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_1924 7607eaaeaaee46bc7b58257705ac941a 561 SUPERFAMILY SSF58104 269 560 1.83E-56 T 15-10-2018 THII_1924 7607eaaeaaee46bc7b58257705ac941a 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 524 4.7E-34 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_1924 7607eaaeaaee46bc7b58257705ac941a 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 7.6E-16 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_1924 7607eaaeaaee46bc7b58257705ac941a 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 423 7.6E-16 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_1924 7607eaaeaaee46bc7b58257705ac941a 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 344 7.6E-16 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_1924 7607eaaeaaee46bc7b58257705ac941a 561 Gene3D G3DSA:1.10.287.950 238 561 5.6E-59 T 15-10-2018 THII_0695 3164a9e77bbfb7dc45b9873dd06ccd0e 208 SUPERFAMILY SSF52507 5 201 1.23E-53 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 THII_0695 3164a9e77bbfb7dc45b9873dd06ccd0e 208 Pfam PF02441 Flavoprotein 5 180 3.6E-23 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 THII_0695 3164a9e77bbfb7dc45b9873dd06ccd0e 208 Gene3D G3DSA:3.40.50.1950 2 205 1.4E-75 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 THII_0695 3164a9e77bbfb7dc45b9873dd06ccd0e 208 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 4 201 33.965 T 15-10-2018 IPR004507 Flavin prenyltransferase UbiX-like THII_0695 3164a9e77bbfb7dc45b9873dd06ccd0e 208 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 199 1.7E-59 T 15-10-2018 IPR004507 Flavin prenyltransferase UbiX-like THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 Gene3D G3DSA:3.40.50.12740 744 874 2.4E-30 T 15-10-2018 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 Gene3D G3DSA:3.40.50.12740 624 743 9.7E-40 T 15-10-2018 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 Gene3D G3DSA:1.10.287.130 346 436 9.6E-22 T 15-10-2018 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 SMART SM00448 743 857 1.1E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 SMART SM00448 623 733 6.3E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 251 353 1.6E-10 T 15-10-2018 IPR000014 PAS domain THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 Gene3D G3DSA:3.30.450.20 224 345 1.7E-15 T 15-10-2018 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 Pfam PF00072 Response regulator receiver domain 626 733 7.0E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 Pfam PF00072 Response regulator receiver domain 745 857 1.9E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 SUPERFAMILY SSF52172 745 861 1.42E-29 T 15-10-2018 IPR011006 CheY-like superfamily THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 SMART SM00388 370 438 4.8E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 SUPERFAMILY SSF52172 625 737 6.97E-34 T 15-10-2018 IPR011006 CheY-like superfamily THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 597 3.2E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 SUPERFAMILY SSF47384 354 440 6.28E-19 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 Pfam PF08447 PAS fold 260 337 2.6E-6 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 SMART SM00387 484 599 2.3E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 596 1.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 1.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 577 1.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 1.1E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 40 139 9.8E-16 T 15-10-2018 IPR033414 Periplasmic sensor domain THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 Pfam PF00512 His Kinase A (phospho-acceptor) domain 370 436 2.5E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 Gene3D G3DSA:3.30.565.10 437 600 8.0E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 SUPERFAMILY SSF55874 428 597 1.44E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3614 211e4405a7deb6fe2fef2fdc51331f70 876 SUPERFAMILY SSF55785 225 348 6.46E-15 T 15-10-2018 IPR035965 PAS domain superfamily THII_1077 d3aa796e18fb608d06f240637a46a779 284 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 12 283 7.3E-32 T 15-10-2018 IPR010106 Recombination-promoting nuclease RpnA THII_1077 d3aa796e18fb608d06f240637a46a779 284 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 240 1.3E-75 T 15-10-2018 THII_1275 d7734c0b9e51b08e93a3c98b3056c25b 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 252 5.3E-55 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 THII_1275 d7734c0b9e51b08e93a3c98b3056c25b 323 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 322 7.4E-133 T 15-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 THII_1275 d7734c0b9e51b08e93a3c98b3056c25b 323 Gene3D G3DSA:3.40.50.720 4 252 6.8E-126 T 15-10-2018 THII_1275 d7734c0b9e51b08e93a3c98b3056c25b 323 Gene3D G3DSA:3.90.25.10 173 306 6.8E-126 T 15-10-2018 THII_1275 d7734c0b9e51b08e93a3c98b3056c25b 323 SUPERFAMILY SSF51735 1 320 3.66E-92 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0780 66aced87fd8e63aca4e071702b23f5de 335 Pfam PF02881 SRP54-type protein, helical bundle domain 42 107 2.2E-10 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 THII_0780 66aced87fd8e63aca4e071702b23f5de 335 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 55 327 7.1E-109 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 THII_0780 66aced87fd8e63aca4e071702b23f5de 335 SMART SM00962 127 328 3.0E-116 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 THII_0780 66aced87fd8e63aca4e071702b23f5de 335 Pfam PF00448 SRP54-type protein, GTPase domain 127 327 2.8E-76 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 THII_0780 66aced87fd8e63aca4e071702b23f5de 335 SUPERFAMILY SSF52540 123 328 5.06E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0780 66aced87fd8e63aca4e071702b23f5de 335 SMART SM00382 126 317 1.6E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0780 66aced87fd8e63aca4e071702b23f5de 335 Gene3D G3DSA:1.20.120.140 28 326 5.4E-113 T 15-10-2018 THII_0780 66aced87fd8e63aca4e071702b23f5de 335 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 301 314 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 THII_0780 66aced87fd8e63aca4e071702b23f5de 335 SMART SM00963 30 111 7.4E-22 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 THII_0780 66aced87fd8e63aca4e071702b23f5de 335 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 54 328 59.832 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 THII_0780 66aced87fd8e63aca4e071702b23f5de 335 SUPERFAMILY SSF47364 25 105 1.05E-19 T 15-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 THII_0780 66aced87fd8e63aca4e071702b23f5de 335 Gene3D G3DSA:3.40.50.300 127 316 5.4E-113 T 15-10-2018 THII_3580 434bf7dac520fd063b44818bf2e3f792 286 Pfam PF01040 UbiA prenyltransferase family 24 268 8.1E-65 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 THII_3580 434bf7dac520fd063b44818bf2e3f792 286 Gene3D G3DSA:1.20.120.1780 166 285 1.4E-13 T 15-10-2018 THII_3580 434bf7dac520fd063b44818bf2e3f792 286 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 30.194 T 15-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 THII_3580 434bf7dac520fd063b44818bf2e3f792 286 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 63 85 - T 15-10-2018 IPR030470 UbiA prenyltransferase conserved site THII_3580 434bf7dac520fd063b44818bf2e3f792 286 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 2.1E-104 T 15-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 THII_3580 434bf7dac520fd063b44818bf2e3f792 286 Gene3D G3DSA:1.10.357.140 20 165 6.1E-43 T 15-10-2018 THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 SMART SM00267 302 475 8.8E-67 T 15-10-2018 IPR000160 GGDEF domain THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 Gene3D G3DSA:3.30.450.40 140 310 1.4E-18 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 309 475 1.0E-59 T 15-10-2018 IPR000160 GGDEF domain THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 Gene3D G3DSA:3.30.70.270 311 475 7.9E-59 T 15-10-2018 THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 2 129 1.2E-10 T 15-10-2018 IPR000014 PAS domain THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 Gene3D G3DSA:3.30.450.20 1 136 1.8E-17 T 15-10-2018 THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 SUPERFAMILY SSF55073 318 474 1.65E-49 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 SMART SM00091 2 68 8.7E-6 T 15-10-2018 IPR000014 PAS domain THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 SMART SM00065 165 310 4.1E-8 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 SUPERFAMILY SSF55781 145 307 4.58E-16 T 15-10-2018 THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 Pfam PF08448 PAS fold 9 123 2.6E-14 T 15-10-2018 IPR013656 PAS fold-4 THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 SUPERFAMILY SSF55785 2 120 3.14E-11 T 15-10-2018 IPR035965 PAS domain superfamily THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 Pfam PF00990 Diguanylate cyclase, GGDEF domain 314 471 2.4E-53 T 15-10-2018 IPR000160 GGDEF domain THII_2053 d6e6e423262de9489f1f301e41bf8df6 476 Pfam PF13185 GAF domain 223 300 1.6E-8 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 524 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 548 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 567 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 510 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 SUPERFAMILY SSF47384 322 404 6.08E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 SUPERFAMILY SSF53850 47 267 9.42E-50 T 15-10-2018 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 Gene3D G3DSA:3.40.190.10 49 264 4.5E-56 T 15-10-2018 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 Gene3D G3DSA:1.10.287.130 302 401 1.2E-28 T 15-10-2018 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 Pfam PF00512 His Kinase A (phospho-acceptor) domain 338 403 1.5E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 Gene3D G3DSA:3.40.50.12740 595 776 8.8E-41 T 15-10-2018 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 Pfam PF00072 Response regulator receiver domain 597 706 1.8E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 SMART SM00388 337 403 1.5E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 Gene3D G3DSA:3.40.190.10 131 226 4.5E-56 T 15-10-2018 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 SUPERFAMILY SSF52172 596 754 1.07E-36 T 15-10-2018 IPR011006 CheY-like superfamily THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 451 568 2.6E-24 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 SMART SM00448 595 708 2.8E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 Gene3D G3DSA:3.30.565.10 402 575 6.2E-50 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 SUPERFAMILY SSF55874 392 571 1.15E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 SMART SM00062 46 268 4.1E-39 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 SMART SM00387 450 570 7.6E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3835 6ca68179529e096f1de9e53d8e1eb982 806 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 266 6.7E-45 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_0488 2ef95c89c9284f317990de83cecfc0d5 401 Pfam PF12704 MacB-like periplasmic core domain 22 234 1.3E-6 T 15-10-2018 IPR025857 MacB-like periplasmic core domain THII_0488 2ef95c89c9284f317990de83cecfc0d5 401 Pfam PF02687 FtsX-like permease family 293 378 1.9E-10 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 THII_0688 609404229382bb885e12b0f85723dd8a 301 SUPERFAMILY SSF54001 54 272 1.47E-46 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily THII_0688 609404229382bb885e12b0f85723dd8a 301 SMART SM00460 177 247 1.3E-21 T 15-10-2018 IPR002931 Transglutaminase-like THII_0688 609404229382bb885e12b0f85723dd8a 301 Gene3D G3DSA:3.10.620.30 82 280 2.1E-49 T 15-10-2018 THII_0688 609404229382bb885e12b0f85723dd8a 301 Pfam PF01841 Transglutaminase-like superfamily 144 245 2.9E-23 T 15-10-2018 IPR002931 Transglutaminase-like THII_0688 609404229382bb885e12b0f85723dd8a 301 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 82 3.5E-25 T 15-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal THII_1602 573aeb1bc6c607372e235534c0b703a9 294 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 1.1E-86 T 15-10-2018 THII_1602 573aeb1bc6c607372e235534c0b703a9 294 SUPERFAMILY SSF53335 73 291 2.39E-37 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1602 573aeb1bc6c607372e235534c0b703a9 294 Gene3D G3DSA:3.40.50.150 103 293 9.1E-54 T 15-10-2018 THII_1602 573aeb1bc6c607372e235534c0b703a9 294 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 30.041 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 THII_1602 573aeb1bc6c607372e235534c0b703a9 294 PIRSF PIRSF000401 1 294 4.0E-81 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 THII_1602 573aeb1bc6c607372e235534c0b703a9 294 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 4.9E-78 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 THII_3937 02bd7733dfadc6dc0196d2c895588759 349 SUPERFAMILY SSF56042 174 344 5.98E-61 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily THII_3937 02bd7733dfadc6dc0196d2c895588759 349 Pfam PF02769 AIR synthase related protein, C-terminal domain 179 343 7.0E-38 T 15-10-2018 IPR010918 PurM-like, C-terminal domain THII_3937 02bd7733dfadc6dc0196d2c895588759 349 Gene3D G3DSA:3.90.650.10 174 346 4.6E-71 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily THII_3937 02bd7733dfadc6dc0196d2c895588759 349 Gene3D G3DSA:3.30.1330.10 8 173 8.9E-67 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily THII_3937 02bd7733dfadc6dc0196d2c895588759 349 Pfam PF00586 AIR synthase related protein, N-terminal domain 62 167 6.8E-14 T 15-10-2018 IPR016188 PurM-like, N-terminal domain THII_3937 02bd7733dfadc6dc0196d2c895588759 349 SUPERFAMILY SSF55326 9 173 1.03E-51 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily THII_3937 02bd7733dfadc6dc0196d2c895588759 349 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 9 346 47.064 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_3937 02bd7733dfadc6dc0196d2c895588759 349 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 9 337 1.8E-139 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 SUPERFAMILY SSF50465 300 395 9.5E-37 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 SUPERFAMILY SSF50447 205 303 6.65E-31 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 6.6E-34 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.5E-16 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 Gene3D G3DSA:3.40.50.300 1 205 9.1E-69 T 15-10-2018 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 Gene3D G3DSA:2.40.30.10 208 336 6.5E-54 T 15-10-2018 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 4.8E-228 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 7.2E-58 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.1E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.1E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.1E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.1E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.1E-23 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 SUPERFAMILY SSF52540 6 221 7.0E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 Gene3D G3DSA:2.40.30.10 340 395 3.9E-29 T 15-10-2018 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.138 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site THII_2724 751904ff2f03bbc7a4c663ffde6108fb 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 3.7E-15 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_0734 0f559c5c1531dd3bf19772a284475723 320 SUPERFAMILY SSF53448 3 259 1.88E-25 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0734 0f559c5c1531dd3bf19772a284475723 320 Gene3D G3DSA:3.90.550.10 2 229 2.2E-21 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0734 0f559c5c1531dd3bf19772a284475723 320 Pfam PF00535 Glycosyl transferase family 2 7 169 1.4E-21 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_1084 bfada8273d7d5827ccca722ab4f48025 132 Gene3D G3DSA:1.20.120.330 1 132 1.0E-46 T 15-10-2018 THII_1084 bfada8273d7d5827ccca722ab4f48025 132 SUPERFAMILY SSF81593 2 127 2.9E-37 T 15-10-2018 THII_1084 bfada8273d7d5827ccca722ab4f48025 132 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 3 129 5.8E-41 T 15-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 THII_1084 bfada8273d7d5827ccca722ab4f48025 132 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 5 129 1.0E-29 T 15-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 THII_1865 8e614c0f69bffafe689aa75efb615137 520 Gene3D G3DSA:3.40.50.200 85 378 5.4E-78 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_1865 8e614c0f69bffafe689aa75efb615137 520 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 128 139 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site THII_1865 8e614c0f69bffafe689aa75efb615137 520 SUPERFAMILY SSF52743 106 376 8.38E-75 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_1865 8e614c0f69bffafe689aa75efb615137 520 PRINTS PR00723 Subtilisin serine protease family (S8) signature 123 142 4.8E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_1865 8e614c0f69bffafe689aa75efb615137 520 PRINTS PR00723 Subtilisin serine protease family (S8) signature 163 176 4.8E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_1865 8e614c0f69bffafe689aa75efb615137 520 PRINTS PR00723 Subtilisin serine protease family (S8) signature 320 336 4.8E-16 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_1865 8e614c0f69bffafe689aa75efb615137 520 Pfam PF00082 Subtilase family 123 372 8.0E-34 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 THII_0906 f747bed86f9b8d8ddb0b57079e9af0ab 336 SMART SM00382 121 253 2.2E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0906 f747bed86f9b8d8ddb0b57079e9af0ab 336 Gene3D G3DSA:1.10.8.60 253 332 1.5E-10 T 15-10-2018 THII_0906 f747bed86f9b8d8ddb0b57079e9af0ab 336 SUPERFAMILY SSF52540 84 321 2.16E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0906 f747bed86f9b8d8ddb0b57079e9af0ab 336 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 125 250 1.9E-28 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_0906 f747bed86f9b8d8ddb0b57079e9af0ab 336 Gene3D G3DSA:3.40.50.300 80 252 4.0E-37 T 15-10-2018 THII_1565 f445c0529954cb10fdc939d202a00284 78 Pfam PF00830 Ribosomal L28 family 3 61 7.3E-27 T 15-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1565 f445c0529954cb10fdc939d202a00284 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.984 T 15-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1565 f445c0529954cb10fdc939d202a00284 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 5.7E-28 T 15-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1565 f445c0529954cb10fdc939d202a00284 78 Gene3D G3DSA:2.30.170.40 2 78 1.5E-32 T 15-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1565 f445c0529954cb10fdc939d202a00284 78 SUPERFAMILY SSF143800 2 77 1.31E-30 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1783 220347ee4db283536166c3deb2e1fd97 455 TIGRFAM TIGR00886 2A0108: nitrite transporter 21 385 9.4E-95 T 15-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 THII_1783 220347ee4db283536166c3deb2e1fd97 455 Gene3D G3DSA:1.20.1250.20 227 435 1.1E-32 T 15-10-2018 THII_1783 220347ee4db283536166c3deb2e1fd97 455 SUPERFAMILY SSF103473 16 428 7.59E-54 T 15-10-2018 IPR036259 MFS transporter superfamily THII_1783 220347ee4db283536166c3deb2e1fd97 455 Gene3D G3DSA:1.20.1250.20 14 206 1.8E-35 T 15-10-2018 THII_1783 220347ee4db283536166c3deb2e1fd97 455 Pfam PF07690 Major Facilitator Superfamily 27 388 7.4E-26 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 THII_3803 591e34e94f49fb3756716003ee41ba03 502 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 38 222 4.6E-10 T 15-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 THII_3803 591e34e94f49fb3756716003ee41ba03 502 TIGRFAM TIGR03183 DNA_S_dndC: putative sulfurtransferase DndC 23 463 4.2E-203 T 15-10-2018 IPR017598 Sulphur transferase DndC, putative THII_3803 591e34e94f49fb3756716003ee41ba03 502 SUPERFAMILY SSF52402 14 225 3.14E-25 T 15-10-2018 THII_3803 591e34e94f49fb3756716003ee41ba03 502 Gene3D G3DSA:3.40.50.620 3 228 1.7E-37 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1405 370d0d7c5c48ab60a4c7e3647e3c2522 78 SMART SM00704 9 45 5.7E-9 T 15-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 THII_1405 370d0d7c5c48ab60a4c7e3647e3c2522 78 SMART SM00704 46 77 0.15 T 15-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 THII_1405 370d0d7c5c48ab60a4c7e3647e3c2522 78 Gene3D G3DSA:3.40.5.90 1 78 8.4E-30 T 15-10-2018 THII_1405 370d0d7c5c48ab60a4c7e3647e3c2522 78 Pfam PF09360 Iron-binding zinc finger CDGSH type 15 39 6.5E-10 T 15-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 THII_0441 5212241926882a044292bca5c30671ed 392 Pfam PF00691 OmpA family 293 369 2.9E-10 T 15-10-2018 IPR006665 OmpA-like domain THII_0441 5212241926882a044292bca5c30671ed 392 Gene3D G3DSA:3.30.1330.60 289 390 2.2E-14 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_0441 5212241926882a044292bca5c30671ed 392 SUPERFAMILY SSF103088 293 389 4.19E-15 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_0150 a1f9c6f818f0b4ee92e723abac4ac8d9 87 SUPERFAMILY SSF54862 4 76 1.23E-19 T 15-10-2018 THII_0150 a1f9c6f818f0b4ee92e723abac4ac8d9 87 Pfam PF00037 4Fe-4S binding domain 4 25 2.5E-6 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0150 a1f9c6f818f0b4ee92e723abac4ac8d9 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0150 a1f9c6f818f0b4ee92e723abac4ac8d9 87 Gene3D G3DSA:3.30.70.20 2 83 2.0E-33 T 15-10-2018 THII_3152 4974ba9dd14635f9aee0bbdb49345837 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 85 209 7.0E-9 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 THII_3152 4974ba9dd14635f9aee0bbdb49345837 297 SUPERFAMILY SSF51735 11 286 9.72E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3152 4974ba9dd14635f9aee0bbdb49345837 297 Gene3D G3DSA:3.40.50.720 12 290 3.4E-34 T 15-10-2018 THII_0795 c2646c47f375a79fb7ae0d5e0ace5a50 314 Pfam PF04055 Radical SAM superfamily 22 186 2.5E-14 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_0795 c2646c47f375a79fb7ae0d5e0ace5a50 314 SMART SM00729 15 228 0.0012 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_0795 c2646c47f375a79fb7ae0d5e0ace5a50 314 SUPERFAMILY SSF102114 25 220 4.05E-21 T 15-10-2018 THII_0795 c2646c47f375a79fb7ae0d5e0ace5a50 314 Gene3D G3DSA:3.20.20.70 19 242 2.4E-19 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2742 3ceafdb0d7919e7b648a35a6d8be661d 67 Gene3D G3DSA:1.10.10.10 7 55 1.3E-10 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2742 3ceafdb0d7919e7b648a35a6d8be661d 67 Pfam PF04255 Protein of unknown function (DUF433) 8 51 3.7E-13 T 15-10-2018 IPR007367 Protein of unknown function DUF433 THII_2742 3ceafdb0d7919e7b648a35a6d8be661d 67 SUPERFAMILY SSF46689 3 52 1.42E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_2597 7b2ed8fdb70315ed090cb81f68ce5f56 159 SUPERFAMILY SSF54611 5 146 1.33E-47 T 15-10-2018 IPR035958 SecB-like superfamily THII_2597 7b2ed8fdb70315ed090cb81f68ce5f56 159 Gene3D G3DSA:3.10.420.10 7 157 3.5E-55 T 15-10-2018 IPR035958 SecB-like superfamily THII_2597 7b2ed8fdb70315ed090cb81f68ce5f56 159 Pfam PF02556 Preprotein translocase subunit SecB 11 148 6.1E-53 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 THII_2597 7b2ed8fdb70315ed090cb81f68ce5f56 159 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 13 145 1.0E-48 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 THII_2597 7b2ed8fdb70315ed090cb81f68ce5f56 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 78 98 9.4E-31 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 THII_2597 7b2ed8fdb70315ed090cb81f68ce5f56 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 128 146 9.4E-31 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 THII_2597 7b2ed8fdb70315ed090cb81f68ce5f56 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 18 35 9.4E-31 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 THII_2597 7b2ed8fdb70315ed090cb81f68ce5f56 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 102 124 9.4E-31 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 THII_2597 7b2ed8fdb70315ed090cb81f68ce5f56 159 Hamap MF_00821 Protein-export protein SecB [secB]. 1 150 30.177 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 THII_3203 ae58e8f5a6ff65af11284b8c9288791f 134 Gene3D G3DSA:2.60.120.10 3 134 4.1E-54 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_3203 ae58e8f5a6ff65af11284b8c9288791f 134 Pfam PF05523 WxcM-like, C-terminal 5 132 1.2E-57 T 15-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 THII_3203 ae58e8f5a6ff65af11284b8c9288791f 134 SUPERFAMILY SSF51182 5 132 4.45E-45 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 SMART SM00304 308 360 0.011 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 SMART SM00304 361 405 44.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 SMART SM00304 216 269 1.1E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 Gene3D G3DSA:1.10.287.950 353 655 2.6E-53 T 15-10-2018 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 4.1E-15 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 531 4.1E-15 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 4.1E-15 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 581 610 4.1E-15 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 SUPERFAMILY SSF58104 373 654 1.26E-44 T 15-10-2018 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 Pfam PF00672 HAMP domain 216 265 6.1E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 Gene3D G3DSA:1.20.1480.50 178 274 2.9E-14 T 15-10-2018 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 SMART SM00283 406 653 1.8E-31 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 466 638 2.7E-24 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 SUPERFAMILY SSF158472 216 268 2.35E-9 T 15-10-2018 THII_2188 5fae09e5763e3b8f41f0a4914c64a07e 655 Pfam PF12729 Four helix bundle sensory module for signal transduction 11 188 1.7E-27 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain THII_2834 f8bd172d8cb586c9402a63a68290a676 117 Pfam PF03061 Thioesterase superfamily 15 89 2.1E-13 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 THII_2834 f8bd172d8cb586c9402a63a68290a676 117 SUPERFAMILY SSF54637 3 117 1.79E-30 T 15-10-2018 IPR029069 HotDog domain superfamily THII_2834 f8bd172d8cb586c9402a63a68290a676 117 Gene3D G3DSA:3.10.129.10 1 117 1.5E-30 T 15-10-2018 THII_1787 cb75c13336609998f6f65671537a26c2 811 SUPERFAMILY SSF51126 371 510 3.45E-7 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_1787 cb75c13336609998f6f65671537a26c2 811 Gene3D G3DSA:2.160.20.10 565 731 2.5E-10 T 15-10-2018 IPR012334 Pectin lyase fold THII_1787 cb75c13336609998f6f65671537a26c2 811 Gene3D G3DSA:2.160.20.10 39 456 7.5E-56 T 15-10-2018 IPR012334 Pectin lyase fold THII_1787 cb75c13336609998f6f65671537a26c2 811 SMART SM00912 30 136 2.4E-13 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_1787 cb75c13336609998f6f65671537a26c2 811 Pfam PF05860 haemagglutination activity domain 21 133 4.3E-24 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_1787 cb75c13336609998f6f65671537a26c2 811 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 53 130 1.4E-20 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_1787 cb75c13336609998f6f65671537a26c2 811 SUPERFAMILY SSF51126 464 564 9.73E-6 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_1787 cb75c13336609998f6f65671537a26c2 811 SUPERFAMILY SSF51126 34 370 4.08E-39 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0894 c4ae00df9bd7a307b69ffa4ea12072b4 265 Pfam PF12784 PD-(D/E)XK nuclease family transposase 39 198 9.4E-7 T 15-10-2018 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 Pfam PF06827 Zinc finger found in FPG and IleRS 900 926 9.5E-6 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.402 T 15-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 Pfam PF08264 Anticodon-binding domain of tRNA 692 844 1.5E-23 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 Gene3D G3DSA:1.10.730.20 647 929 1.5E-88 T 15-10-2018 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 SUPERFAMILY SSF52374 4 654 3.42E-137 T 15-10-2018 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 647 6.5E-212 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 SUPERFAMILY SSF50677 204 410 3.98E-55 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 845 9.1E-283 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 Gene3D G3DSA:3.90.740.10 195 415 1.5E-237 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 SUPERFAMILY SSF47323 659 928 7.85E-70 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 2.3E-33 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.3E-33 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 533 546 2.3E-33 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 2.3E-33 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 408 423 2.3E-33 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 THII_1379 d598327c54d0bd6f9f09fff191d8f7b6 938 Gene3D G3DSA:3.40.50.620 25 636 1.5E-237 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1724 d069d45e2e6fc5e9f2a533adb767dbfc 133 Gene3D G3DSA:1.25.40.10 38 129 2.2E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0811 8c0ab7ccf5afbe02ea580964ac1c5ed2 135 Pfam PF12844 Helix-turn-helix domain 5 63 6.2E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_0811 8c0ab7ccf5afbe02ea580964ac1c5ed2 135 SMART SM00530 6 61 6.2E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_0811 8c0ab7ccf5afbe02ea580964ac1c5ed2 135 Gene3D G3DSA:1.10.260.40 1 121 1.2E-15 T 15-10-2018 THII_0811 8c0ab7ccf5afbe02ea580964ac1c5ed2 135 SUPERFAMILY SSF47413 1 67 2.42E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_2910 d0ddfde22c58561838d32f6ce2ca7ce8 291 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 284 40.4 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 THII_2910 d0ddfde22c58561838d32f6ce2ca7ce8 291 Pfam PF03668 P-loop ATPase protein family 1 283 6.0E-96 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 THII_2910 d0ddfde22c58561838d32f6ce2ca7ce8 291 SUPERFAMILY SSF52540 1 150 2.3E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2910 d0ddfde22c58561838d32f6ce2ca7ce8 291 PIRSF PIRSF005052 1 287 3.0E-109 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 THII_1138 d5ca5db3aecdf962ffda3a04e584b01c 310 Gene3D G3DSA:3.20.20.70 49 304 9.2E-37 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_1138 d5ca5db3aecdf962ffda3a04e584b01c 310 Pfam PF13186 Iron-sulfur cluster-binding domain 227 294 3.5E-10 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain THII_1138 d5ca5db3aecdf962ffda3a04e584b01c 310 SUPERFAMILY SSF102114 54 295 2.55E-17 T 15-10-2018 THII_1613 7ef03240aa54c35af9a58979d9fd7448 78 Gene3D G3DSA:1.10.10.10 8 77 1.4E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1613 7ef03240aa54c35af9a58979d9fd7448 78 Pfam PF04255 Protein of unknown function (DUF433) 9 64 1.9E-27 T 15-10-2018 IPR007367 Protein of unknown function DUF433 THII_1613 7ef03240aa54c35af9a58979d9fd7448 78 SUPERFAMILY SSF46689 5 75 7.88E-25 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 TIGRFAM TIGR01807 CM_P2: chorismate mutase 7 82 7.2E-24 T 15-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 Gene3D G3DSA:3.40.190.10 96 266 4.6E-60 T 15-10-2018 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 PIRSF PIRSF001500 1 361 2.6E-142 T 15-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 Pfam PF01842 ACT domain 280 343 2.7E-11 T 15-10-2018 IPR002912 ACT domain THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 Gene3D G3DSA:3.40.190.10 174 258 4.6E-60 T 15-10-2018 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 SUPERFAMILY SSF53850 93 276 1.52E-59 T 15-10-2018 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 Gene3D G3DSA:3.30.70.260 271 360 2.0E-30 T 15-10-2018 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 Pfam PF01817 Chorismate mutase type II 11 90 7.3E-21 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 SUPERFAMILY SSF48600 3 91 7.63E-20 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 Gene3D G3DSA:1.20.59.10 7 93 3.9E-28 T 15-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 Pfam PF00800 Prephenate dehydratase 94 270 5.4E-65 T 15-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 SMART SM00830 11 92 1.4E-27 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 306 313 - T 15-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 THII_3387 58c1ca294fcfc5c4ee5160e4808b9e23 361 SUPERFAMILY SSF55021 263 359 1.73E-30 T 15-10-2018 THII_2425 89c86e511c9c27525114988e09d83b20 560 Gene3D G3DSA:3.50.30.80 381 530 2.1E-55 T 15-10-2018 THII_2425 89c86e511c9c27525114988e09d83b20 560 SUPERFAMILY SSF52016 382 559 1.57E-58 T 15-10-2018 THII_2425 89c86e511c9c27525114988e09d83b20 560 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 125 135 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 THII_2425 89c86e511c9c27525114988e09d83b20 560 SUPERFAMILY SSF143975 4 380 3.14E-138 T 15-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 THII_2425 89c86e511c9c27525114988e09d83b20 560 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 7 559 42.904 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 THII_2425 89c86e511c9c27525114988e09d83b20 560 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 21 559 2.9E-229 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 THII_2425 89c86e511c9c27525114988e09d83b20 560 Pfam PF00920 Dehydratase family 37 556 9.1E-223 T 15-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 THII_2425 89c86e511c9c27525114988e09d83b20 560 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 467 478 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 THII_0747 1b21e7dd1934e4cc5524f6f2c39e8a57 187 Pfam PF03602 Conserved hypothetical protein 95 5 177 5.4E-55 T 15-10-2018 THII_0747 1b21e7dd1934e4cc5524f6f2c39e8a57 187 SUPERFAMILY SSF53335 5 177 1.67E-48 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0747 1b21e7dd1934e4cc5524f6f2c39e8a57 187 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 182 6.7E-52 T 15-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 THII_0747 1b21e7dd1934e4cc5524f6f2c39e8a57 187 Gene3D G3DSA:3.40.50.150 1 187 1.4E-57 T 15-10-2018 THII_0747 1b21e7dd1934e4cc5524f6f2c39e8a57 187 PIRSF PIRSF004553 4 185 4.8E-50 T 15-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 THII_3280 589512210bdc01dbac04a61f2def1e8d 268 Pfam PF13614 AAA domain 3 168 3.7E-20 T 15-10-2018 IPR025669 AAA domain THII_3280 589512210bdc01dbac04a61f2def1e8d 268 Gene3D G3DSA:3.40.50.300 1 259 9.6E-71 T 15-10-2018 THII_3280 589512210bdc01dbac04a61f2def1e8d 268 SUPERFAMILY SSF52540 2 253 3.82E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3280 589512210bdc01dbac04a61f2def1e8d 268 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 6.4E-107 T 15-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 THII_3280 589512210bdc01dbac04a61f2def1e8d 268 PIRSF PIRSF003092 1 268 4.0E-90 T 15-10-2018 IPR025501 ATP binding protein MinD THII_0352 23558e5dfbc621e08767a44bb290eeb0 226 SUPERFAMILY SSF52980 24 183 8.04E-10 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0352 23558e5dfbc621e08767a44bb290eeb0 226 Pfam PF05685 Putative restriction endonuclease 29 200 4.2E-20 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3528 cf632779c1b5cf96f14cb89b7002dfa5 363 Hamap MF_02040 Iron-sulfur cluster carrier protein. 93 341 37.961 T 15-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein THII_3528 cf632779c1b5cf96f14cb89b7002dfa5 363 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 98 340 1.1E-104 T 15-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 THII_3528 cf632779c1b5cf96f14cb89b7002dfa5 363 SUPERFAMILY SSF117916 4 86 1.73E-15 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily THII_3528 cf632779c1b5cf96f14cb89b7002dfa5 363 Gene3D G3DSA:3.30.300.130 4 89 7.4E-11 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily THII_3528 cf632779c1b5cf96f14cb89b7002dfa5 363 ProSitePatterns PS01215 Mrp family signature. 204 220 - T 15-10-2018 IPR000808 Mrp, conserved site GO:0005524 THII_3528 cf632779c1b5cf96f14cb89b7002dfa5 363 Pfam PF01883 Iron-sulfur cluster assembly protein 7 77 4.4E-16 T 15-10-2018 IPR002744 MIP18 family-like THII_3528 cf632779c1b5cf96f14cb89b7002dfa5 363 SUPERFAMILY SSF52540 100 346 3.74E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3528 cf632779c1b5cf96f14cb89b7002dfa5 363 Gene3D G3DSA:3.40.50.300 90 339 7.7E-86 T 15-10-2018 THII_2318 d5abd07efec412e7de82190621f0806a 236 SUPERFAMILY SSF52980 8 148 2.25E-18 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2318 d5abd07efec412e7de82190621f0806a 236 Gene3D G3DSA:3.90.1570.10 19 164 4.6E-7 T 15-10-2018 THII_2318 d5abd07efec412e7de82190621f0806a 236 Pfam PF05685 Putative restriction endonuclease 8 168 1.9E-19 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2481 e028558e15980ce017edae975abfa276 139 Pfam PF02501 Type II secretion system (T2SS), protein I 48 126 2.5E-27 T 15-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 THII_2481 e028558e15980ce017edae975abfa276 139 SUPERFAMILY SSF54523 47 127 6.67E-25 T 15-10-2018 THII_2481 e028558e15980ce017edae975abfa276 139 Gene3D G3DSA:3.30.1300.30 41 127 3.5E-28 T 15-10-2018 THII_2481 e028558e15980ce017edae975abfa276 139 TIGRFAM TIGR01707 gspI: type II secretion system protein I 14 112 1.1E-27 T 15-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 THII_2481 e028558e15980ce017edae975abfa276 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 34 2.6E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2481 e028558e15980ce017edae975abfa276 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 1.2E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2481 e028558e15980ce017edae975abfa276 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 Pfam PF01330 RuvA N terminal domain 1 62 1.4E-19 T 15-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.0E-15 T 15-10-2018 THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 SMART SM00278 108 127 0.024 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 SMART SM00278 73 92 0.39 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 Gene3D G3DSA:1.10.8.10 153 198 1.9E-20 T 15-10-2018 THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 Pfam PF07499 RuvA, C-terminal domain 154 196 1.1E-13 T 15-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 Gene3D G3DSA:2.40.50.140 1 66 3.1E-25 T 15-10-2018 THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 SUPERFAMILY SSF50249 1 63 1.2E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 Gene3D G3DSA:1.10.150.20 67 140 7.8E-26 T 15-10-2018 THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 198 30.512 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 197 1.7E-55 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 SUPERFAMILY SSF46929 155 196 4.45E-10 T 15-10-2018 IPR036267 RuvA, C-terminal domain superfamily THII_0514 9c7a08d7c6b6e81719d4d15e84e9ce1b 198 SUPERFAMILY SSF47781 67 137 2.72E-22 T 15-10-2018 IPR010994 RuvA domain 2-like THII_2725 c6e3f6ac48c31364e54d3e4d8553a1e5 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 122 1.5E-15 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 THII_2725 c6e3f6ac48c31364e54d3e4d8553a1e5 126 PRINTS PR01650 Bacterial translocase SecE signature 43 64 5.2E-20 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 THII_2725 c6e3f6ac48c31364e54d3e4d8553a1e5 126 PRINTS PR01650 Bacterial translocase SecE signature 88 108 5.2E-20 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 THII_2725 c6e3f6ac48c31364e54d3e4d8553a1e5 126 PRINTS PR01650 Bacterial translocase SecE signature 108 124 5.2E-20 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 THII_2725 c6e3f6ac48c31364e54d3e4d8553a1e5 126 PRINTS PR01650 Bacterial translocase SecE signature 64 84 5.2E-20 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 THII_2725 c6e3f6ac48c31364e54d3e4d8553a1e5 126 Gene3D G3DSA:1.20.5.1030 65 122 4.2E-15 T 15-10-2018 IPR038379 SecE superfamily THII_2725 c6e3f6ac48c31364e54d3e4d8553a1e5 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 70 98 - T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 THII_2725 c6e3f6ac48c31364e54d3e4d8553a1e5 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 69 121 1.6E-17 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 THII_2725 c6e3f6ac48c31364e54d3e4d8553a1e5 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 62 120 10.89 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 Gene3D G3DSA:3.10.350.10 595 659 6.0E-16 T 15-10-2018 IPR036779 LysM domain superfamily THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 Gene3D G3DSA:3.10.350.10 531 591 2.3E-15 T 15-10-2018 IPR036779 LysM domain superfamily THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 Pfam PF01476 LysM domain 608 650 1.3E-11 T 15-10-2018 IPR018392 LysM domain THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 Pfam PF01476 LysM domain 541 584 5.4E-12 T 15-10-2018 IPR018392 LysM domain THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 Gene3D G3DSA:1.10.530.10 272 427 8.1E-31 T 15-10-2018 THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 SUPERFAMILY SSF54106 539 584 7.32E-10 T 15-10-2018 THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 SUPERFAMILY SSF54106 607 650 3.79E-10 T 15-10-2018 THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 Pfam PF01464 Transglycosylase SLT domain 285 391 2.2E-24 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 298 326 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 SUPERFAMILY SSF53955 277 427 1.46E-39 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 SMART SM00257 607 650 4.8E-13 T 15-10-2018 IPR018392 LysM domain THII_0940 cc1adb8d76bb6442b7f746f1a5a89e31 666 SMART SM00257 540 584 1.4E-12 T 15-10-2018 IPR018392 LysM domain THII_0429 0e705a89f6145cd10b0f7764daeee827 1042 Gene3D G3DSA:2.60.40.2030 693 814 6.0E-28 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0429 0e705a89f6145cd10b0f7764daeee827 1042 SMART SM00237 686 786 6.4E-21 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0429 0e705a89f6145cd10b0f7764daeee827 1042 Pfam PF03160 Calx-beta domain 698 785 2.1E-20 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0429 0e705a89f6145cd10b0f7764daeee827 1042 SUPERFAMILY SSF141072 697 813 2.49E-27 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_3499 f396086130423c7861867d801f5ee912 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 885 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 THII_3499 f396086130423c7861867d801f5ee912 886 Gene3D G3DSA:3.40.50.970 469 702 1.9E-110 T 15-10-2018 THII_3499 f396086130423c7861867d801f5ee912 886 SUPERFAMILY SSF52518 55 463 8.6E-144 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_3499 f396086130423c7861867d801f5ee912 886 Gene3D G3DSA:3.40.50.920 703 886 6.6E-74 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_3499 f396086130423c7861867d801f5ee912 886 Gene3D G3DSA:3.40.50.970 54 468 1.2E-135 T 15-10-2018 THII_3499 f396086130423c7861867d801f5ee912 886 SUPERFAMILY SSF52518 470 697 1.4E-98 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_3499 f396086130423c7861867d801f5ee912 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 111 291 5.6E-8 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 THII_3499 f396086130423c7861867d801f5ee912 886 PIRSF PIRSF000156 1 886 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 THII_3499 f396086130423c7861867d801f5ee912 886 SUPERFAMILY SSF52922 698 885 8.03E-60 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 Gene3D G3DSA:3.50.50.60 6 278 7.7E-81 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 6.9E-14 T 15-10-2018 THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 6.9E-14 T 15-10-2018 THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 6.9E-14 T 15-10-2018 THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 169 6.9E-14 T 15-10-2018 THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 Gene3D G3DSA:3.50.50.60 107 242 7.7E-81 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 5.7E-22 T 15-10-2018 THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.7E-22 T 15-10-2018 THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 5.7E-22 T 15-10-2018 THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 5.7E-22 T 15-10-2018 THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 5.7E-22 T 15-10-2018 THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 SUPERFAMILY SSF51905 2 303 8.1E-36 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 277 4.7E-51 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_3133 3d4b171594ef9a561392ed5ae78ff631 387 Gene3D G3DSA:3.30.390.120 314 378 1.4E-25 T 15-10-2018 THII_1964 594e13261379a65d8194bec3f76cf9cb 137 SUPERFAMILY SSF88723 1 120 3.08E-18 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_1964 594e13261379a65d8194bec3f76cf9cb 137 Pfam PF01850 PIN domain 6 122 2.8E-12 T 15-10-2018 IPR002716 PIN domain THII_1964 594e13261379a65d8194bec3f76cf9cb 137 Gene3D G3DSA:3.40.50.1010 5 132 3.5E-11 T 15-10-2018 THII_3694 0abc3178db2f05324ba609637e50efd6 193 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 1 178 2.0E-55 T 15-10-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 THII_3694 0abc3178db2f05324ba609637e50efd6 193 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 10 175 3.0E-36 T 15-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 THII_3694 0abc3178db2f05324ba609637e50efd6 193 SUPERFAMILY SSF53323 1 179 1.57E-42 T 15-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 THII_3694 0abc3178db2f05324ba609637e50efd6 193 Gene3D G3DSA:3.40.920.10 1 180 3.9E-56 T 15-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 THII_3685 0493031bbed2db22661d55f3a9030607 156 Gene3D G3DSA:1.20.1220.20 1 156 6.8E-32 T 15-10-2018 THII_3685 0493031bbed2db22661d55f3a9030607 156 Pfam PF01724 Domain of unknown function DUF29 7 152 7.9E-51 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2316 37245393587d046cadac03901da492f7 469 Pfam PF04055 Radical SAM superfamily 188 349 2.5E-20 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_2316 37245393587d046cadac03901da492f7 469 SMART SM00729 182 384 9.2E-27 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_2316 37245393587d046cadac03901da492f7 469 Gene3D G3DSA:3.80.30.20 182 393 1.1E-31 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe THII_2316 37245393587d046cadac03901da492f7 469 SUPERFAMILY SSF52242 21 126 1.41E-8 T 15-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 THII_2316 37245393587d046cadac03901da492f7 469 Pfam PF02310 B12 binding domain 13 122 5.8E-20 T 15-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 THII_2316 37245393587d046cadac03901da492f7 469 SUPERFAMILY SSF102114 155 382 8.76E-44 T 15-10-2018 THII_2316 37245393587d046cadac03901da492f7 469 Gene3D G3DSA:3.40.50.280 18 133 5.3E-11 T 15-10-2018 THII_1578 bab8ef6db586b53ad86cd4350543d195 110 SUPERFAMILY SSF81296 12 107 2.38E-29 T 15-10-2018 IPR014756 Immunoglobulin E-set THII_1578 bab8ef6db586b53ad86cd4350543d195 110 Gene3D G3DSA:2.60.40.10 3 109 3.0E-34 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1578 bab8ef6db586b53ad86cd4350543d195 110 Pfam PF08770 Sulphur oxidation protein SoxZ 15 104 1.7E-37 T 15-10-2018 IPR014880 Sulphur oxidation protein SoxZ THII_1578 bab8ef6db586b53ad86cd4350543d195 110 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 11 107 1.2E-39 T 15-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ THII_2775 e78d53bc51c9a2f61d5e70b744cd995e 236 SUPERFAMILY SSF117892 2 128 4.45E-16 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily THII_2775 e78d53bc51c9a2f61d5e70b744cd995e 236 PRINTS PR00679 Prohibitin signature 142 158 6.0E-6 T 15-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 THII_2775 e78d53bc51c9a2f61d5e70b744cd995e 236 PRINTS PR00679 Prohibitin signature 119 142 6.0E-6 T 15-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 THII_2775 e78d53bc51c9a2f61d5e70b744cd995e 236 PRINTS PR00679 Prohibitin signature 48 66 6.0E-6 T 15-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 THII_2775 e78d53bc51c9a2f61d5e70b744cd995e 236 PRINTS PR00679 Prohibitin signature 25 44 6.0E-6 T 15-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 THII_2775 e78d53bc51c9a2f61d5e70b744cd995e 236 Pfam PF01145 SPFH domain / Band 7 family 1 146 6.0E-15 T 15-10-2018 IPR001107 Band 7 domain THII_3735 37f66dc948c1f781f4c19440b2b53c3b 475 Gene3D G3DSA:2.130.10.10 181 343 1.2E-11 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3735 37f66dc948c1f781f4c19440b2b53c3b 475 SUPERFAMILY SSF110296 133 357 5.23E-27 T 15-10-2018 THII_3735 37f66dc948c1f781f4c19440b2b53c3b 475 Pfam PF14870 Photosynthesis system II assembly factor YCF48 67 353 6.2E-9 T 15-10-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain THII_3735 37f66dc948c1f781f4c19440b2b53c3b 475 SUPERFAMILY SSF110296 28 153 6.02E-14 T 15-10-2018 THII_3735 37f66dc948c1f781f4c19440b2b53c3b 475 Gene3D G3DSA:2.130.10.10 24 154 4.1E-7 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0918 b5c4a4578fc93a119e6e17438462b08f 393 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 245 344 1.1E-17 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_0918 b5c4a4578fc93a119e6e17438462b08f 393 Pfam PF13175 AAA ATPase domain 4 57 2.8E-9 T 15-10-2018 THII_0918 b5c4a4578fc93a119e6e17438462b08f 393 PIRSF PIRSF029347 3 380 7.0E-31 T 15-10-2018 IPR014555 RecF-like THII_0918 b5c4a4578fc93a119e6e17438462b08f 393 SUPERFAMILY SSF52540 1 362 1.82E-19 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0918 b5c4a4578fc93a119e6e17438462b08f 393 Gene3D G3DSA:3.40.50.300 174 376 2.4E-5 T 15-10-2018 THII_0918 b5c4a4578fc93a119e6e17438462b08f 393 Gene3D G3DSA:3.40.50.300 2 130 8.2E-11 T 15-10-2018 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 Gene3D G3DSA:3.40.50.12740 794 919 8.3E-47 T 15-10-2018 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 Gene3D G3DSA:3.30.450.20 258 389 1.8E-40 T 15-10-2018 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 Gene3D G3DSA:3.30.565.10 608 769 7.0E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SMART SM00086 336 378 1.5E-6 T 15-10-2018 IPR001610 PAC motif THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SMART SM00086 458 500 2.4E-4 T 15-10-2018 IPR001610 PAC motif THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SMART SM00091 263 330 4.9E-4 T 15-10-2018 IPR000014 PAS domain THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SMART SM00091 386 452 3.1E-11 T 15-10-2018 IPR000014 PAS domain THII_3413 ea1a2a09a5219412fd754106265c6d70 920 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 653 765 4.1E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SUPERFAMILY SSF47384 525 607 4.32E-24 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 Gene3D G3DSA:1.10.287.130 524 607 2.4E-27 T 15-10-2018 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 Gene3D G3DSA:3.30.450.20 390 523 1.2E-29 T 15-10-2018 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SUPERFAMILY SSF55785 275 387 8.38E-26 T 15-10-2018 IPR035965 PAS domain superfamily THII_3413 ea1a2a09a5219412fd754106265c6d70 920 Pfam PF00072 Response regulator receiver domain 797 908 4.7E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 Pfam PF00512 His Kinase A (phospho-acceptor) domain 539 606 8.7E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 750 763 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 705 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 719 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 726 744 2.0E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SMART SM00448 795 908 2.5E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SMART SM00387 652 766 2.1E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SUPERFAMILY SSF52172 788 913 8.68E-40 T 15-10-2018 IPR011006 CheY-like superfamily THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SUPERFAMILY SSF55874 595 764 1.96E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3413 ea1a2a09a5219412fd754106265c6d70 920 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 390 507 7.1E-22 T 15-10-2018 IPR000014 PAS domain THII_3413 ea1a2a09a5219412fd754106265c6d70 920 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 263 385 3.7E-21 T 15-10-2018 IPR000014 PAS domain THII_3413 ea1a2a09a5219412fd754106265c6d70 920 Pfam PF13426 PAS domain 397 499 5.1E-16 T 15-10-2018 IPR000014 PAS domain THII_3413 ea1a2a09a5219412fd754106265c6d70 920 Pfam PF13426 PAS domain 274 377 9.2E-21 T 15-10-2018 IPR000014 PAS domain THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SMART SM00388 538 606 4.2E-26 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3413 ea1a2a09a5219412fd754106265c6d70 920 SUPERFAMILY SSF55785 375 498 1.34E-26 T 15-10-2018 IPR035965 PAS domain superfamily THII_2504 23c4a6febe0e27ff4e0b37c248f574ef 583 Pfam PF12770 CHAT domain 45 302 1.5E-26 T 15-10-2018 IPR024983 CHAT domain THII_2504 23c4a6febe0e27ff4e0b37c248f574ef 583 SUPERFAMILY SSF52540 355 547 1.89E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2504 23c4a6febe0e27ff4e0b37c248f574ef 583 Gene3D G3DSA:3.40.50.300 355 505 6.6E-10 T 15-10-2018 THII_1024 8c6a12c111d4ecdc4a77583e9476f33a 73 Gene3D G3DSA:2.10.260.10 1 44 1.3E-11 T 15-10-2018 THII_1024 8c6a12c111d4ecdc4a77583e9476f33a 73 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 2 42 1.0E-6 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 THII_1024 8c6a12c111d4ecdc4a77583e9476f33a 73 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 2 41 3.2E-13 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 THII_1024 8c6a12c111d4ecdc4a77583e9476f33a 73 SMART SM00966 1 46 9.4E-10 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 THII_1024 8c6a12c111d4ecdc4a77583e9476f33a 73 SUPERFAMILY SSF89447 1 43 2.27E-11 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily THII_2308 6f4a07737cf0b85c563d31ebe65648ac 311 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 2 117 1.6E-47 T 15-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 THII_2308 6f4a07737cf0b85c563d31ebe65648ac 311 SMART SM01400 1 117 1.1E-72 T 15-10-2018 THII_2308 6f4a07737cf0b85c563d31ebe65648ac 311 Gene3D G3DSA:3.40.50.2020 3 298 2.2E-126 T 15-10-2018 THII_2308 6f4a07737cf0b85c563d31ebe65648ac 311 Gene3D G3DSA:3.40.50.2020 144 286 2.2E-126 T 15-10-2018 THII_2308 6f4a07737cf0b85c563d31ebe65648ac 311 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 310 47.023 T 15-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 THII_2308 6f4a07737cf0b85c563d31ebe65648ac 311 SUPERFAMILY SSF53271 65 300 1.09E-61 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like THII_2308 6f4a07737cf0b85c563d31ebe65648ac 311 Pfam PF14572 Phosphoribosyl synthetase-associated domain 196 309 1.9E-28 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 THII_2308 6f4a07737cf0b85c563d31ebe65648ac 311 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 15-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 THII_2308 6f4a07737cf0b85c563d31ebe65648ac 311 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 309 5.2E-119 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 Gene3D G3DSA:3.40.50.970 312 484 1.3E-63 T 15-10-2018 THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 SUPERFAMILY SSF52922 486 615 7.72E-33 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 ProSitePatterns PS00802 Transketolase signature 2. 420 436 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 Pfam PF02780 Transketolase, C-terminal domain 490 606 2.1E-24 T 15-10-2018 IPR033248 Transketolase, C-terminal domain THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 6 277 1.8E-125 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 SUPERFAMILY SSF52518 286 473 5.89E-58 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 Pfam PF02779 Transketolase, pyrimidine binding domain 315 473 1.2E-36 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 5 615 46.119 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 SUPERFAMILY SSF52518 3 344 1.46E-79 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 614 5.9E-275 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 ProSitePatterns PS00801 Transketolase signature 1. 31 50 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 SMART SM00861 314 478 5.9E-64 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain THII_1465 b9e750c009513ebeece3e6fa6bf206d7 623 Gene3D G3DSA:3.40.50.920 490 615 3.9E-41 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_2360 52702046a1865df49dea939a91f8f298 757 SMART SM00382 208 353 5.8E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2360 52702046a1865df49dea939a91f8f298 757 SMART SM00382 489 656 6.0E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2360 52702046a1865df49dea939a91f8f298 757 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 THII_2360 52702046a1865df49dea939a91f8f298 757 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 THII_2360 52702046a1865df49dea939a91f8f298 757 Gene3D G3DSA:1.10.1780.10 1 142 7.1E-44 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 THII_2360 52702046a1865df49dea939a91f8f298 757 Gene3D G3DSA:3.40.50.300 441 653 2.0E-79 T 15-10-2018 THII_2360 52702046a1865df49dea939a91f8f298 757 Gene3D G3DSA:1.10.8.60 655 754 2.1E-29 T 15-10-2018 THII_2360 52702046a1865df49dea939a91f8f298 757 SUPERFAMILY SSF52540 169 429 8.99E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2360 52702046a1865df49dea939a91f8f298 757 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 15-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 THII_2360 52702046a1865df49dea939a91f8f298 757 Gene3D G3DSA:1.10.8.60 358 440 4.9E-34 T 15-10-2018 THII_2360 52702046a1865df49dea939a91f8f298 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 1.1E-37 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_2360 52702046a1865df49dea939a91f8f298 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 1.1E-37 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_2360 52702046a1865df49dea939a91f8f298 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 1.1E-37 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_2360 52702046a1865df49dea939a91f8f298 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 1.1E-37 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_2360 52702046a1865df49dea939a91f8f298 757 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 649 5.2E-47 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_2360 52702046a1865df49dea939a91f8f298 757 SUPERFAMILY SSF52540 439 746 5.02E-80 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2360 52702046a1865df49dea939a91f8f298 757 Gene3D G3DSA:3.40.50.300 168 357 1.1E-63 T 15-10-2018 THII_2360 52702046a1865df49dea939a91f8f298 757 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.3E-13 T 15-10-2018 IPR004176 Clp, N-terminal THII_2360 52702046a1865df49dea939a91f8f298 757 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 1.2E-11 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_2360 52702046a1865df49dea939a91f8f298 757 SUPERFAMILY SSF81923 1 141 2.35E-59 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 THII_2360 52702046a1865df49dea939a91f8f298 757 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 2.0E-24 T 15-10-2018 IPR019489 Clp ATPase, C-terminal THII_2360 52702046a1865df49dea939a91f8f298 757 SMART SM01086 655 744 2.7E-35 T 15-10-2018 IPR019489 Clp ATPase, C-terminal THII_1932 dbb2ca4d77c366cb9431eb781a5bb691 245 SUPERFAMILY SSF53335 17 211 7.26E-19 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1932 dbb2ca4d77c366cb9431eb781a5bb691 245 Pfam PF13578 Methyltransferase domain 47 165 3.6E-10 T 15-10-2018 THII_1932 dbb2ca4d77c366cb9431eb781a5bb691 245 Gene3D G3DSA:3.40.50.150 10 204 1.7E-20 T 15-10-2018 THII_3380 94c3553e72d4a3d38717b8ad2a29ab19 126 Pfam PF01850 PIN domain 4 111 3.7E-9 T 15-10-2018 IPR002716 PIN domain THII_3380 94c3553e72d4a3d38717b8ad2a29ab19 126 Gene3D G3DSA:3.40.50.1010 3 120 1.1E-18 T 15-10-2018 THII_3380 94c3553e72d4a3d38717b8ad2a29ab19 126 SUPERFAMILY SSF88723 4 115 5.33E-14 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_1701 967f93f89a8773775a76aca0373031e9 310 Pfam PF00535 Glycosyl transferase family 2 12 140 2.4E-26 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_1701 967f93f89a8773775a76aca0373031e9 310 Gene3D G3DSA:3.90.550.10 1 261 2.4E-44 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1701 967f93f89a8773775a76aca0373031e9 310 SUPERFAMILY SSF53448 9 249 4.5E-45 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0303 abbd4c24a50603c9c6bf9546ea9aec63 91 Pfam PF00366 Ribosomal protein S17 16 82 1.6E-33 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0303 abbd4c24a50603c9c6bf9546ea9aec63 91 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 12 81 9.4E-35 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0303 abbd4c24a50603c9c6bf9546ea9aec63 91 SUPERFAMILY SSF50249 12 88 1.84E-32 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0303 abbd4c24a50603c9c6bf9546ea9aec63 91 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 12 81 5.0E-24 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0303 abbd4c24a50603c9c6bf9546ea9aec63 91 Gene3D G3DSA:2.40.50.140 8 90 1.7E-35 T 15-10-2018 THII_0303 abbd4c24a50603c9c6bf9546ea9aec63 91 PRINTS PR00973 Ribosomal protein S17 family signature 72 79 1.2E-12 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0303 abbd4c24a50603c9c6bf9546ea9aec63 91 PRINTS PR00973 Ribosomal protein S17 family signature 62 72 1.2E-12 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0303 abbd4c24a50603c9c6bf9546ea9aec63 91 PRINTS PR00973 Ribosomal protein S17 family signature 30 53 1.2E-12 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0303 abbd4c24a50603c9c6bf9546ea9aec63 91 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 11 86 23.2 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0313 8690fc47be9e8b1b718d0d265a43eb60 103 Gene3D G3DSA:3.30.70.600 1 103 8.9E-38 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily THII_0313 8690fc47be9e8b1b718d0d265a43eb60 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.4E-19 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0313 8690fc47be9e8b1b718d0d265a43eb60 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.4E-19 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0313 8690fc47be9e8b1b718d0d265a43eb60 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.4E-19 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0313 8690fc47be9e8b1b718d0d265a43eb60 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.1E-35 T 15-10-2018 IPR027486 Ribosomal protein S10 domain THII_0313 8690fc47be9e8b1b718d0d265a43eb60 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.7E-46 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0313 8690fc47be9e8b1b718d0d265a43eb60 103 SMART SM01403 7 101 6.7E-57 T 15-10-2018 IPR027486 Ribosomal protein S10 domain THII_0313 8690fc47be9e8b1b718d0d265a43eb60 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 15-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0313 8690fc47be9e8b1b718d0d265a43eb60 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.679 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0313 8690fc47be9e8b1b718d0d265a43eb60 103 SUPERFAMILY SSF54999 5 102 5.62E-37 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily THII_3904 423594394d115a105c1b56068761252c 252 Gene3D G3DSA:3.30.420.490 120 240 9.2E-73 T 15-10-2018 THII_3904 423594394d115a105c1b56068761252c 252 SUPERFAMILY SSF53067 1 115 1.68E-26 T 15-10-2018 THII_3904 423594394d115a105c1b56068761252c 252 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 252 20.003 T 15-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 THII_3904 423594394d115a105c1b56068761252c 252 Gene3D G3DSA:3.30.420.40 3 245 9.2E-73 T 15-10-2018 THII_3904 423594394d115a105c1b56068761252c 252 SUPERFAMILY SSF53067 120 249 8.09E-31 T 15-10-2018 THII_3904 423594394d115a105c1b56068761252c 252 Pfam PF03309 Type III pantothenate kinase 3 204 1.4E-51 T 15-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 THII_3904 423594394d115a105c1b56068761252c 252 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 248 7.6E-37 T 15-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 THII_2446 8ac94c7d2011909ddf573f1b890ec777 795 SMART SM00283 499 746 1.7E-97 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_2446 8ac94c7d2011909ddf573f1b890ec777 795 SMART SM00304 210 262 5.7E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2446 8ac94c7d2011909ddf573f1b890ec777 795 SMART SM00304 446 498 1.9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2446 8ac94c7d2011909ddf573f1b890ec777 795 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 182 5.1E-22 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain THII_2446 8ac94c7d2011909ddf573f1b890ec777 795 SUPERFAMILY SSF158472 214 261 1.31E-6 T 15-10-2018 THII_2446 8ac94c7d2011909ddf573f1b890ec777 795 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 558 714 1.4E-53 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_2446 8ac94c7d2011909ddf573f1b890ec777 795 Gene3D G3DSA:1.10.287.950 447 748 1.3E-86 T 15-10-2018 THII_2446 8ac94c7d2011909ddf573f1b890ec777 795 SUPERFAMILY SSF58104 466 747 1.22E-74 T 15-10-2018 THII_2446 8ac94c7d2011909ddf573f1b890ec777 795 Gene3D G3DSA:1.20.1480.50 166 268 3.0E-10 T 15-10-2018 THII_2446 8ac94c7d2011909ddf573f1b890ec777 795 Gene3D G3DSA:3.30.450.20 283 402 1.2E-34 T 15-10-2018 THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 Pfam PF01739 CheR methyltransferase, SAM binding domain 67 240 1.5E-42 T 15-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 SUPERFAMILY SSF53335 66 250 1.91E-40 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 SMART SM00028 358 391 1.4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 SMART SM00028 324 357 61.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 Gene3D G3DSA:3.40.50.150 65 254 1.5E-49 T 15-10-2018 THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 PRINTS PR00996 Glutamate methyltransferase family signature 199 213 4.7E-22 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 PRINTS PR00996 Glutamate methyltransferase family signature 129 145 4.7E-22 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 PRINTS PR00996 Glutamate methyltransferase family signature 59 71 4.7E-22 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 PRINTS PR00996 Glutamate methyltransferase family signature 218 241 4.7E-22 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 PRINTS PR00996 Glutamate methyltransferase family signature 96 116 4.7E-22 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 Gene3D G3DSA:1.25.40.10 311 424 3.7E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 SUPERFAMILY SSF48452 322 421 1.41E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1926 20bb90b3d63571b8baad44c3cdae9ef3 425 SMART SM00138 4 258 7.5E-40 T 15-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 THII_0452 8c17b57c428926d60064ecdf05808d41 533 Pfam PF13308 YARHG domain 456 533 2.4E-24 T 15-10-2018 IPR025582 YARHG domain THII_0452 8c17b57c428926d60064ecdf05808d41 533 SMART SM00287 37 100 8.0E-7 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type THII_0452 8c17b57c428926d60064ecdf05808d41 533 Pfam PF08239 Bacterial SH3 domain 46 97 1.5E-11 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type THII_0452 8c17b57c428926d60064ecdf05808d41 533 Gene3D G3DSA:1.20.58.1690 454 532 8.9E-21 T 15-10-2018 IPR038434 YARHG domain superfamily THII_0452 8c17b57c428926d60064ecdf05808d41 533 SMART SM00028 152 185 2.2 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0452 8c17b57c428926d60064ecdf05808d41 533 SMART SM00028 115 148 17.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0452 8c17b57c428926d60064ecdf05808d41 533 SUPERFAMILY SSF52129 190 428 2.54E-44 T 15-10-2018 IPR029030 Caspase-like domain superfamily THII_0452 8c17b57c428926d60064ecdf05808d41 533 SUPERFAMILY SSF48452 96 190 2.33E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0452 8c17b57c428926d60064ecdf05808d41 533 Gene3D G3DSA:1.25.40.10 97 195 4.6E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0452 8c17b57c428926d60064ecdf05808d41 533 SMART SM01324 452 533 7.1E-20 T 15-10-2018 IPR025582 YARHG domain THII_0452 8c17b57c428926d60064ecdf05808d41 533 Gene3D G3DSA:2.30.30.40 26 96 8.4E-16 T 15-10-2018 THII_0452 8c17b57c428926d60064ecdf05808d41 533 Pfam PF00656 Caspase domain 208 426 4.1E-29 T 15-10-2018 THII_0452 8c17b57c428926d60064ecdf05808d41 533 Gene3D G3DSA:3.40.50.1460 196 434 7.2E-66 T 15-10-2018 THII_1626 6abf56c07b5daefda59f4036168d46e4 166 Pfam PF14358 Domain of unknown function (DUF4405) 14 63 9.4E-10 T 15-10-2018 IPR025517 Domain of unknown function DUF4405 THII_0659 2dcdf9aa5847e16262bb620e4a09b97d 383 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 200 214 - T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_0659 2dcdf9aa5847e16262bb620e4a09b97d 383 Gene3D G3DSA:3.40.50.300 108 362 1.0E-82 T 15-10-2018 THII_0659 2dcdf9aa5847e16262bb620e4a09b97d 383 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 10 350 4.3E-129 T 15-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 THII_0659 2dcdf9aa5847e16262bb620e4a09b97d 383 Gene3D G3DSA:3.30.450.90 2 107 3.4E-27 T 15-10-2018 THII_0659 2dcdf9aa5847e16262bb620e4a09b97d 383 Pfam PF00437 Type II/IV secretion system protein 77 277 3.5E-36 T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_0659 2dcdf9aa5847e16262bb620e4a09b97d 383 SUPERFAMILY SSF52540 9 342 1.93E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1381 9d68d8bba1c08f2e8422a298aa9ab78c 406 Gene3D G3DSA:3.10.20.340 277 406 3.0E-41 T 15-10-2018 THII_1381 9d68d8bba1c08f2e8422a298aa9ab78c 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 25 406 6.0E-128 T 15-10-2018 THII_1381 9d68d8bba1c08f2e8422a298aa9ab78c 406 SUPERFAMILY SSF56266 15 403 3.66E-134 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 THII_1381 9d68d8bba1c08f2e8422a298aa9ab78c 406 Gene3D G3DSA:3.60.70.12 11 276 1.5E-89 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 THII_1381 9d68d8bba1c08f2e8422a298aa9ab78c 406 Pfam PF01960 ArgJ family 20 406 2.5E-140 T 15-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 THII_1381 9d68d8bba1c08f2e8422a298aa9ab78c 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 141.874 T 15-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 THII_1381 9d68d8bba1c08f2e8422a298aa9ab78c 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 16 406 3.7E-117 T 15-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 THII_3848 d92aa985cf4fca22ea616566ba34b0d1 391 Pfam PF01610 Transposase 270 386 2.9E-12 T 15-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain THII_3848 d92aa985cf4fca22ea616566ba34b0d1 391 Pfam PF00487 Fatty acid desaturase 10 212 4.1E-12 T 15-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 THII_1329 f687a8c08ee4660b77bad5c3da32bd52 171 Pfam PF00436 Single-strand binding protein family 6 110 5.1E-38 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 THII_1329 f687a8c08ee4660b77bad5c3da32bd52 171 Hamap MF_00984 Single-stranded DNA-binding protein. 6 114 36.645 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 THII_1329 f687a8c08ee4660b77bad5c3da32bd52 171 Gene3D G3DSA:2.40.50.140 2 125 1.8E-45 T 15-10-2018 THII_1329 f687a8c08ee4660b77bad5c3da32bd52 171 SUPERFAMILY SSF50249 4 171 2.84E-58 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_1329 f687a8c08ee4660b77bad5c3da32bd52 171 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 4 171 2.2E-50 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 THII_3712 a0b9ebf4ba630d9920b7546a34259065 505 Gene3D G3DSA:1.10.3210.10 314 505 1.1E-64 T 15-10-2018 THII_3712 a0b9ebf4ba630d9920b7546a34259065 505 SUPERFAMILY SSF53067 17 137 2.76E-35 T 15-10-2018 THII_3712 a0b9ebf4ba630d9920b7546a34259065 505 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 310 1.6E-96 T 15-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 THII_3712 a0b9ebf4ba630d9920b7546a34259065 505 SUPERFAMILY SSF53067 142 312 3.97E-44 T 15-10-2018 THII_3712 a0b9ebf4ba630d9920b7546a34259065 505 Gene3D G3DSA:3.30.420.150 121 299 4.7E-86 T 15-10-2018 THII_3712 a0b9ebf4ba630d9920b7546a34259065 505 Gene3D G3DSA:3.30.420.40 18 307 4.7E-86 T 15-10-2018 THII_3712 a0b9ebf4ba630d9920b7546a34259065 505 PIRSF PIRSF001267 7 505 2.2E-191 T 15-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 THII_3712 a0b9ebf4ba630d9920b7546a34259065 505 Pfam PF02541 Ppx/GppA phosphatase family 30 311 1.0E-75 T 15-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 THII_3712 a0b9ebf4ba630d9920b7546a34259065 505 SUPERFAMILY SSF109604 317 503 1.26E-49 T 15-10-2018 THII_1197 977cedd0736fa4b5efad814f00e345bf 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 331 425 7.6E-25 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 THII_1197 977cedd0736fa4b5efad814f00e345bf 491 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 490 34.254 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 THII_1197 977cedd0736fa4b5efad814f00e345bf 491 Gene3D G3DSA:3.90.190.20 337 491 1.9E-56 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_1197 977cedd0736fa4b5efad814f00e345bf 491 SUPERFAMILY SSF53623 101 327 9.96E-75 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_1197 977cedd0736fa4b5efad814f00e345bf 491 Gene3D G3DSA:3.40.1190.10 101 334 2.0E-81 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_1197 977cedd0736fa4b5efad814f00e345bf 491 Pfam PF01225 Mur ligase family, catalytic domain 21 98 1.9E-8 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 THII_1197 977cedd0736fa4b5efad814f00e345bf 491 Pfam PF08245 Mur ligase middle domain 110 310 4.6E-52 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 THII_1197 977cedd0736fa4b5efad814f00e345bf 491 Gene3D G3DSA:3.40.1390.10 2 100 2.0E-21 T 15-10-2018 THII_1197 977cedd0736fa4b5efad814f00e345bf 491 SUPERFAMILY SSF53244 331 490 4.43E-46 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_1197 977cedd0736fa4b5efad814f00e345bf 491 SUPERFAMILY SSF63418 1 99 9.81E-18 T 15-10-2018 IPR035911 MurE/MurF, N-terminal THII_1197 977cedd0736fa4b5efad814f00e345bf 491 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 20 490 1.8E-157 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 PIRSF PIRSF001174 6 783 0.0 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 360 497 5.2E-18 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 TIGRFAM TIGR00763 lon: endopeptidase La 20 778 6.3E-304 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 Gene3D G3DSA:3.30.230.10 593 780 1.3E-81 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 Gene3D G3DSA:1.10.8.60 499 592 4.6E-33 T 15-10-2018 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 681 700 3.0E-54 T 15-10-2018 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 603 619 3.0E-54 T 15-10-2018 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 711 730 3.0E-54 T 15-10-2018 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 734 752 3.0E-54 T 15-10-2018 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 364 383 3.0E-54 T 15-10-2018 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 SMART SM00382 356 500 1.9E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 Hamap MF_01973 Lon protease [lon]. 19 780 72.19 T 15-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 SUPERFAMILY SSF54211 603 778 1.56E-58 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 Gene3D G3DSA:1.20.58.1480 128 253 1.6E-45 T 15-10-2018 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 Gene3D G3DSA:2.30.130.40 2 125 1.9E-33 T 15-10-2018 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 18 209 5.9E-40 T 15-10-2018 IPR003111 Lon, substrate-binding domain THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 SMART SM00464 18 210 1.5E-74 T 15-10-2018 IPR003111 Lon, substrate-binding domain THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 SUPERFAMILY SSF88697 18 209 1.29E-49 T 15-10-2018 IPR015947 PUA-like superfamily THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 SUPERFAMILY SSF52540 323 596 1.15E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 578 780 8.1E-99 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 THII_0145 e629fbe7a7415f774b8a9c2fc5bbf937 810 Gene3D G3DSA:3.40.50.300 321 498 3.9E-62 T 15-10-2018 THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 SUPERFAMILY SSF50447 716 798 5.82E-22 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 Gene3D G3DSA:2.40.30.10 945 1042 2.1E-32 T 15-10-2018 THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 462 1043 5.6E-259 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 Pfam PF03144 Elongation factor Tu domain 2 964 1029 4.4E-7 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 Pfam PF11987 Translation-initiation factor 2 828 933 3.1E-35 T 15-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 67 105 2.2E-15 T 15-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 Pfam PF00009 Elongation factor Tu GTP binding domain 547 704 4.6E-33 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 Gene3D G3DSA:3.40.50.10050 838 944 6.4E-36 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 545 701 8.7E-30 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 1041 17.159 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 467 517 4.0E-15 T 15-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 Gene3D G3DSA:3.40.50.300 541 714 3.0E-69 T 15-10-2018 THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 SUPERFAMILY SSF52156 821 950 1.7E-35 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 SUPERFAMILY SSF52540 543 710 2.28E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 SUPERFAMILY SSF46955 3 51 4.39E-9 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 SUPERFAMILY SSF50447 945 1041 2.55E-33 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 Gene3D G3DSA:3.30.56.50 2 51 4.2E-12 T 15-10-2018 THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 Gene3D G3DSA:2.40.30.10 715 833 3.3E-37 T 15-10-2018 THII_1177 2e299dfad78c3acc0540f06c20fb79fd 1043 ProSitePatterns PS01176 Initiation factor 2 signature. 994 1016 - T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 THII_3058 dbba4e250b600aca20059f9cb530829b 481 Gene3D G3DSA:3.50.50.60 251 404 2.3E-38 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3058 dbba4e250b600aca20059f9cb530829b 481 Gene3D G3DSA:3.40.50.720 142 250 6.7E-19 T 15-10-2018 THII_3058 dbba4e250b600aca20059f9cb530829b 481 SUPERFAMILY SSF46548 2 154 8.89E-39 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_3058 dbba4e250b600aca20059f9cb530829b 481 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.9E-24 T 15-10-2018 THII_3058 dbba4e250b600aca20059f9cb530829b 481 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 3.9E-24 T 15-10-2018 THII_3058 dbba4e250b600aca20059f9cb530829b 481 PRINTS PR00419 Adrenodoxin reductase family signature 210 220 3.9E-24 T 15-10-2018 THII_3058 dbba4e250b600aca20059f9cb530829b 481 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 3.9E-24 T 15-10-2018 THII_3058 dbba4e250b600aca20059f9cb530829b 481 Gene3D G3DSA:1.10.1060.10 9 141 1.5E-22 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_3058 dbba4e250b600aca20059f9cb530829b 481 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 130 5.9E-23 T 15-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 THII_3058 dbba4e250b600aca20059f9cb530829b 481 SUPERFAMILY SSF51971 143 405 1.17E-65 T 15-10-2018 THII_3058 dbba4e250b600aca20059f9cb530829b 481 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 479 3.2E-223 T 15-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 THII_3058 dbba4e250b600aca20059f9cb530829b 481 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 461 7.4E-25 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_3058 dbba4e250b600aca20059f9cb530829b 481 SUPERFAMILY SSF51971 389 474 1.53E-9 T 15-10-2018 THII_2307 198effb4100c4d73016ea7523ee6f88d 209 Pfam PF01386 Ribosomal L25p family 6 93 2.0E-27 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 THII_2307 198effb4100c4d73016ea7523ee6f88d 209 SUPERFAMILY SSF50715 4 198 2.44E-54 T 15-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 THII_2307 198effb4100c4d73016ea7523ee6f88d 209 Gene3D G3DSA:2.40.240.10 4 96 2.8E-33 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 THII_2307 198effb4100c4d73016ea7523ee6f88d 209 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 190 29.579 T 15-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 THII_2307 198effb4100c4d73016ea7523ee6f88d 209 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 96 24.594 T 15-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 THII_2307 198effb4100c4d73016ea7523ee6f88d 209 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 105 192 2.7E-27 T 15-10-2018 IPR020057 Ribosomal protein L25, beta domain THII_2307 198effb4100c4d73016ea7523ee6f88d 209 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 96 3.0E-23 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 THII_2307 198effb4100c4d73016ea7523ee6f88d 209 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 173 1.3E-44 T 15-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 THII_2307 198effb4100c4d73016ea7523ee6f88d 209 Gene3D G3DSA:2.170.120.20 100 198 1.8E-23 T 15-10-2018 IPR037121 Ribosomal protein L25, C-terminal THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 8.0E-16 T 15-10-2018 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 572 8.0E-16 T 15-10-2018 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 576 588 8.0E-16 T 15-10-2018 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 212 226 8.0E-16 T 15-10-2018 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 Pfam PF00122 E1-E2 ATPase 164 302 6.6E-32 T 15-10-2018 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 Gene3D G3DSA:2.70.150.20 156 265 3.7E-29 T 15-10-2018 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 355 361 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 Pfam PF00702 haloacid dehalogenase-like hydrolase 349 566 4.2E-39 T 15-10-2018 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 Gene3D G3DSA:3.40.1110.10 364 485 1.5E-75 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 113 653 2.7E-124 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 136 630 1.1E-62 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 SUPERFAMILY SSF81653 165 260 4.32E-26 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 SUPERFAMILY SSF56784 351 643 9.9E-38 T 15-10-2018 IPR036412 HAD-like superfamily THII_2793 ce1a16fd319539d35f2e29563b2d54ed 665 Gene3D G3DSA:3.40.50.1000 335 603 1.5E-75 T 15-10-2018 IPR023214 HAD superfamily THII_2598 799d1d2a8e484eb9714841182e063311 148 Gene3D G3DSA:3.40.250.10 44 146 9.8E-30 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily THII_2598 799d1d2a8e484eb9714841182e063311 148 Pfam PF00581 Rhodanese-like domain 42 134 5.9E-18 T 15-10-2018 IPR001763 Rhodanese-like domain THII_2598 799d1d2a8e484eb9714841182e063311 148 SUPERFAMILY SSF52821 21 142 2.62E-33 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily THII_2598 799d1d2a8e484eb9714841182e063311 148 SMART SM00450 40 137 6.9E-27 T 15-10-2018 IPR001763 Rhodanese-like domain THII_1804 753d1659309bea2a516e3b149dd829d8 732 SMART SM00487 198 395 4.1E-18 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_1804 753d1659309bea2a516e3b149dd829d8 732 Gene3D G3DSA:1.10.8.630 1 114 4.4E-31 T 15-10-2018 THII_1804 753d1659309bea2a516e3b149dd829d8 732 Gene3D G3DSA:3.40.50.300 189 381 3.1E-71 T 15-10-2018 THII_1804 753d1659309bea2a516e3b149dd829d8 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 5 731 24.175 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 THII_1804 753d1659309bea2a516e3b149dd829d8 732 SMART SM00490 494 591 4.3E-6 T 15-10-2018 IPR001650 Helicase, C-terminal THII_1804 753d1659309bea2a516e3b149dd829d8 732 SUPERFAMILY SSF52540 178 383 6.6E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1804 753d1659309bea2a516e3b149dd829d8 732 TIGRFAM TIGR00595 priA: primosomal protein N' 224 728 2.0E-187 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 THII_1804 753d1659309bea2a516e3b149dd829d8 732 Pfam PF00271 Helicase conserved C-terminal domain 485 590 6.8E-7 T 15-10-2018 IPR001650 Helicase, C-terminal THII_1804 753d1659309bea2a516e3b149dd829d8 732 SUPERFAMILY SSF52540 460 617 2.66E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1804 753d1659309bea2a516e3b149dd829d8 732 Pfam PF04851 Type III restriction enzyme, res subunit 201 362 5.3E-14 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 THII_0712 d69a0d424f4b5ab571d80fa839ce68e7 395 SUPERFAMILY SSF53383 2 387 1.67E-125 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_0712 d69a0d424f4b5ab571d80fa839ce68e7 395 Gene3D G3DSA:3.90.1150.10 13 378 1.5E-138 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_0712 d69a0d424f4b5ab571d80fa839ce68e7 395 Gene3D G3DSA:3.40.640.10 48 294 1.5E-138 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_0712 d69a0d424f4b5ab571d80fa839ce68e7 395 PIRSF PIRSF000521 3 150 1.4E-9 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 THII_0712 d69a0d424f4b5ab571d80fa839ce68e7 395 PIRSF PIRSF000521 162 388 9.7E-31 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 THII_0712 d69a0d424f4b5ab571d80fa839ce68e7 395 Pfam PF00202 Aminotransferase class-III 11 384 3.3E-113 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 THII_0712 d69a0d424f4b5ab571d80fa839ce68e7 395 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 4 388 68.33 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 THII_0712 d69a0d424f4b5ab571d80fa839ce68e7 395 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 385 9.4E-140 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 THII_0712 d69a0d424f4b5ab571d80fa839ce68e7 395 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 212 249 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 THII_0714 af4d213f16494afcd4659a703f31f9a1 261 SUPERFAMILY SSF53067 1 243 2.76E-37 T 15-10-2018 THII_0714 af4d213f16494afcd4659a703f31f9a1 261 Pfam PF00480 ROK family 4 159 9.7E-21 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 THII_0714 af4d213f16494afcd4659a703f31f9a1 261 Gene3D G3DSA:3.30.420.40 1 104 5.6E-22 T 15-10-2018 THII_0714 af4d213f16494afcd4659a703f31f9a1 261 Gene3D G3DSA:3.30.420.40 105 245 2.4E-38 T 15-10-2018 THII_3588 3594a1dfe659b7dffe07eb26e8b76024 369 Pfam PF02504 Fatty acid synthesis protein 5 324 1.2E-107 T 15-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 THII_3588 3594a1dfe659b7dffe07eb26e8b76024 369 PIRSF PIRSF002465 3 339 5.9E-129 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 THII_3588 3594a1dfe659b7dffe07eb26e8b76024 369 Gene3D G3DSA:3.40.718.10 3 345 1.8E-128 T 15-10-2018 THII_3588 3594a1dfe659b7dffe07eb26e8b76024 369 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 151.419 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 THII_3588 3594a1dfe659b7dffe07eb26e8b76024 369 SUPERFAMILY SSF53659 4 335 4.93E-107 T 15-10-2018 THII_3588 3594a1dfe659b7dffe07eb26e8b76024 369 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 338 1.1E-116 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 THII_0132 603ab398b71dc4475d4538231aa36443 295 Pfam PF01925 Sulfite exporter TauE/SafE 2 286 1.0E-34 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 THII_1137 e98aed211f4f229e0adee58e38e03e19 213 Pfam PF05685 Putative restriction endonuclease 27 186 1.3E-15 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1137 e98aed211f4f229e0adee58e38e03e19 213 SUPERFAMILY SSF52980 22 167 6.97E-5 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1039 68b37fe21a0d0aa082b6ffe0c7010214 387 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 13 367 5.1E-125 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 THII_1039 68b37fe21a0d0aa082b6ffe0c7010214 387 Gene3D G3DSA:3.30.470.20 182 377 1.4E-76 T 15-10-2018 THII_1039 68b37fe21a0d0aa082b6ffe0c7010214 387 SUPERFAMILY SSF51246 308 379 7.85E-13 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 THII_1039 68b37fe21a0d0aa082b6ffe0c7010214 387 Pfam PF02222 ATP-grasp domain 118 283 3.6E-51 T 15-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type THII_1039 68b37fe21a0d0aa082b6ffe0c7010214 387 SUPERFAMILY SSF52440 10 106 1.08E-26 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily THII_1039 68b37fe21a0d0aa082b6ffe0c7010214 387 Gene3D G3DSA:3.40.50.20 1 113 4.3E-39 T 15-10-2018 THII_1039 68b37fe21a0d0aa082b6ffe0c7010214 387 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 12 364 40.89 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 THII_1039 68b37fe21a0d0aa082b6ffe0c7010214 387 SUPERFAMILY SSF56059 109 301 3.16E-54 T 15-10-2018 THII_1039 68b37fe21a0d0aa082b6ffe0c7010214 387 Gene3D G3DSA:3.30.1490.20 114 181 3.3E-15 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 THII_3255 185fc9c7992a33a520562ac83186b244 213 Gene3D G3DSA:2.130.10.10 62 191 4.5E-10 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3255 185fc9c7992a33a520562ac83186b244 213 SUPERFAMILY SSF63829 101 176 4.36E-8 T 15-10-2018 THII_2523 e7ad698eb85674759f8f503bbb27b547 158 Pfam PF02508 Rnf-Nqr subunit, membrane protein 59 135 4.6E-12 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_2523 e7ad698eb85674759f8f503bbb27b547 158 Pfam PF02508 Rnf-Nqr subunit, membrane protein 1 59 1.7E-16 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_2523 e7ad698eb85674759f8f503bbb27b547 158 PIRSF PIRSF006102 1 62 4.2E-20 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_2523 e7ad698eb85674759f8f503bbb27b547 158 PIRSF PIRSF006102 58 153 6.1E-20 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_0852 bf87960da27bc49dd0773e0c55394c3e 410 Pfam PF00033 Cytochrome b/b6/petB 28 215 7.2E-66 T 15-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 THII_0852 bf87960da27bc49dd0773e0c55394c3e 410 SUPERFAMILY SSF81342 16 286 6.28E-94 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 THII_0852 bf87960da27bc49dd0773e0c55394c3e 410 SUPERFAMILY SSF81648 287 403 1.49E-32 T 15-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 THII_0852 bf87960da27bc49dd0773e0c55394c3e 410 Gene3D G3DSA:1.20.810.10 3 410 1.3E-150 T 15-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 THII_0852 bf87960da27bc49dd0773e0c55394c3e 410 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 284 386 1.1E-41 T 15-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 THII_0852 bf87960da27bc49dd0773e0c55394c3e 410 PIRSF PIRSF038885 2 410 1.2E-159 T 15-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 THII_3159 3f0466000773431159854f757426f59f 1341 Gene3D G3DSA:2.60.40.60 1114 1204 5.2E-6 T 15-10-2018 THII_3159 3f0466000773431159854f757426f59f 1341 SUPERFAMILY SSF49313 1120 1206 1.26E-6 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_3159 3f0466000773431159854f757426f59f 1341 Gene3D G3DSA:2.60.40.10 291 397 4.0E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3159 3f0466000773431159854f757426f59f 1341 Gene3D G3DSA:2.60.40.10 169 274 2.1E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3159 3f0466000773431159854f757426f59f 1341 Gene3D G3DSA:2.60.40.10 43 148 3.1E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3159 3f0466000773431159854f757426f59f 1341 Gene3D G3DSA:2.60.40.10 424 529 8.1E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1259 401775bf87ee45030553631bb727e3bc 330 Pfam PF01380 SIS domain 46 178 5.4E-30 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 THII_1259 401775bf87ee45030553631bb727e3bc 330 Pfam PF00571 CBS domain 209 264 6.8E-5 T 15-10-2018 IPR000644 CBS domain THII_1259 401775bf87ee45030553631bb727e3bc 330 Pfam PF00571 CBS domain 275 327 2.7E-5 T 15-10-2018 IPR000644 CBS domain THII_1259 401775bf87ee45030553631bb727e3bc 330 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 51 320 5.4E-106 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 THII_1259 401775bf87ee45030553631bb727e3bc 330 SMART SM00116 281 329 27.0 T 15-10-2018 IPR000644 CBS domain THII_1259 401775bf87ee45030553631bb727e3bc 330 SMART SM00116 216 264 0.06 T 15-10-2018 IPR000644 CBS domain THII_1259 401775bf87ee45030553631bb727e3bc 330 PIRSF PIRSF004692 1 330 5.8E-130 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 THII_1259 401775bf87ee45030553631bb727e3bc 330 Gene3D G3DSA:3.10.580.10 202 327 9.0E-43 T 15-10-2018 THII_1259 401775bf87ee45030553631bb727e3bc 330 Gene3D G3DSA:3.40.50.10490 11 201 1.6E-63 T 15-10-2018 THII_1259 401775bf87ee45030553631bb727e3bc 330 SUPERFAMILY SSF53697 20 328 2.67E-66 T 15-10-2018 THII_3702 c0646a2e3765ee9b15ced89b8684b753 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 THII_3702 c0646a2e3765ee9b15ced89b8684b753 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.7E-90 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 THII_3702 c0646a2e3765ee9b15ced89b8684b753 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 8.4E-97 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 THII_3702 c0646a2e3765ee9b15ced89b8684b753 223 Gene3D G3DSA:3.20.20.70 5 222 3.4E-82 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3702 c0646a2e3765ee9b15ced89b8684b753 223 PIRSF PIRSF001461 1 223 6.7E-102 T 15-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 THII_3702 c0646a2e3765ee9b15ced89b8684b753 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 THII_3702 c0646a2e3765ee9b15ced89b8684b753 223 SUPERFAMILY SSF51366 4 217 1.41E-74 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 THII_0010 7fbca07d8d283f2c42e4c59703a2e4f9 662 Gene3D G3DSA:2.130.10.130 211 419 2.6E-5 T 15-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 THII_0010 7fbca07d8d283f2c42e4c59703a2e4f9 662 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 142 204 1.1E-6 T 15-10-2018 THII_0010 7fbca07d8d283f2c42e4c59703a2e4f9 662 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 281 355 2.4E-10 T 15-10-2018 THII_0010 7fbca07d8d283f2c42e4c59703a2e4f9 662 Pfam PF07593 ASPIC and UnbV 563 623 6.8E-10 T 15-10-2018 IPR011519 ASPIC/UnbV THII_0010 7fbca07d8d283f2c42e4c59703a2e4f9 662 SUPERFAMILY SSF69318 64 523 5.62E-58 T 15-10-2018 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 637 7.8E-130 T 15-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 4.1E-58 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 4.1E-58 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 4.1E-58 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 630 643 4.1E-58 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 4.1E-58 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 4.1E-58 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 4.1E-58 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-93 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.1E-93 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.1E-93 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.1E-93 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.1E-93 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.1E-93 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.1E-93 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.1E-93 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 640 1.1E-239 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 THII_3165 5a92874c7f9a8f71713ddbe4077a022e 661 Pfam PF01578 Cytochrome C assembly protein 89 295 7.5E-55 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 THII_2514 5f9c90cd51c0f76f1ca5105be0fc1558 424 SUPERFAMILY SSF52540 4 353 3.08E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2514 5f9c90cd51c0f76f1ca5105be0fc1558 424 Gene3D G3DSA:3.40.50.300 3 359 2.9E-25 T 15-10-2018 THII_2514 5f9c90cd51c0f76f1ca5105be0fc1558 424 PIRSF PIRSF029347 3 384 4.3E-26 T 15-10-2018 IPR014555 RecF-like THII_2514 5f9c90cd51c0f76f1ca5105be0fc1558 424 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 21 350 1.3E-31 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_3810 7673b7bf92405b5ef7495e28cd4f7d3b 164 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 100 117 7.7E-8 T 15-10-2018 THII_3810 7673b7bf92405b5ef7495e28cd4f7d3b 164 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 118 137 7.7E-8 T 15-10-2018 THII_3810 7673b7bf92405b5ef7495e28cd4f7d3b 164 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 138 158 7.7E-8 T 15-10-2018 THII_3810 7673b7bf92405b5ef7495e28cd4f7d3b 164 Gene3D G3DSA:3.30.1330.60 28 160 5.3E-43 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_3810 7673b7bf92405b5ef7495e28cd4f7d3b 164 Pfam PF00691 OmpA family 54 149 6.7E-26 T 15-10-2018 IPR006665 OmpA-like domain THII_3810 7673b7bf92405b5ef7495e28cd4f7d3b 164 SUPERFAMILY SSF103088 29 155 3.27E-38 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_3810 7673b7bf92405b5ef7495e28cd4f7d3b 164 PRINTS PR01021 OMPA domain signature 85 100 1.4E-14 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_3810 7673b7bf92405b5ef7495e28cd4f7d3b 164 PRINTS PR01021 OMPA domain signature 55 77 1.4E-14 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_3810 7673b7bf92405b5ef7495e28cd4f7d3b 164 PRINTS PR01021 OMPA domain signature 100 116 1.4E-14 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_2788 830089f3bf0ef6266edcecba3b3ae821 296 SUPERFAMILY SSF51735 124 267 6.22E-16 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2788 830089f3bf0ef6266edcecba3b3ae821 296 Gene3D G3DSA:3.40.50.720 128 267 2.8E-43 T 15-10-2018 THII_2788 830089f3bf0ef6266edcecba3b3ae821 296 Gene3D G3DSA:3.90.180.10 17 127 2.8E-43 T 15-10-2018 THII_2788 830089f3bf0ef6266edcecba3b3ae821 296 SUPERFAMILY SSF50129 10 140 7.61E-23 T 15-10-2018 IPR011032 GroES-like superfamily THII_0075 81f56a9cb998f50f2f6d8fb7f24ab9eb 175 Gene3D G3DSA:3.40.30.10 22 174 5.8E-41 T 15-10-2018 THII_0075 81f56a9cb998f50f2f6d8fb7f24ab9eb 175 Pfam PF08534 Redoxin 36 157 8.6E-16 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 THII_0075 81f56a9cb998f50f2f6d8fb7f24ab9eb 175 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 5 170 3.8E-51 T 15-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 THII_0075 81f56a9cb998f50f2f6d8fb7f24ab9eb 175 SUPERFAMILY SSF52833 39 171 7.5E-34 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_3921 a5d5990ce34bd2a7c3441aa4bd879fe7 711 Pfam PF01370 NAD dependent epimerase/dehydratase family 382 607 7.8E-32 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 THII_3921 a5d5990ce34bd2a7c3441aa4bd879fe7 711 SUPERFAMILY SSF51735 2 155 1.55E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3921 a5d5990ce34bd2a7c3441aa4bd879fe7 711 SUPERFAMILY SSF51735 376 700 2.2E-61 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3921 a5d5990ce34bd2a7c3441aa4bd879fe7 711 Gene3D G3DSA:3.30.360.10 130 280 2.0E-42 T 15-10-2018 THII_3921 a5d5990ce34bd2a7c3441aa4bd879fe7 711 Gene3D G3DSA:3.40.50.720 9 291 2.0E-42 T 15-10-2018 THII_3921 a5d5990ce34bd2a7c3441aa4bd879fe7 711 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 125 6.5E-22 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 THII_3921 a5d5990ce34bd2a7c3441aa4bd879fe7 711 Gene3D G3DSA:3.40.50.720 373 705 5.9E-68 T 15-10-2018 THII_0767 5e4f93f2a44e1a0330622410b7f28c60 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 356 5.4E-67 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 THII_0767 5e4f93f2a44e1a0330622410b7f28c60 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 3 356 3.1E-120 T 15-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 THII_2982 e365c07b6905d84257319b2247691bab 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 86 3.0E-22 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_2982 e365c07b6905d84257319b2247691bab 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.852 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_2982 e365c07b6905d84257319b2247691bab 89 Pfam PF01649 Ribosomal protein S20 2 83 1.3E-27 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_2982 e365c07b6905d84257319b2247691bab 89 SUPERFAMILY SSF46992 3 86 6.93E-30 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_2982 e365c07b6905d84257319b2247691bab 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 84 4.9E-25 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_2982 e365c07b6905d84257319b2247691bab 89 Gene3D G3DSA:1.20.58.110 1 86 2.5E-27 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0572 4e2ea68c69f6c08e3847d4e01b3375b2 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 9.5E-18 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_0572 4e2ea68c69f6c08e3847d4e01b3375b2 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 55 1.1E-6 T 15-10-2018 THII_0572 4e2ea68c69f6c08e3847d4e01b3375b2 84 SUPERFAMILY SSF143120 1 81 1.57E-21 T 15-10-2018 IPR036165 YefM-like superfamily THII_0572 4e2ea68c69f6c08e3847d4e01b3375b2 84 Gene3D G3DSA:3.40.1620.40 3 68 2.4E-24 T 15-10-2018 THII_0341 34aac1b62775541d19269d4276e60282 114 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 35 109 9.5E-17 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0341 34aac1b62775541d19269d4276e60282 114 PRINTS PR00607 Class IE cytochrome C signature 44 55 1.8E-8 T 15-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 THII_0341 34aac1b62775541d19269d4276e60282 114 PRINTS PR00607 Class IE cytochrome C signature 84 96 1.8E-8 T 15-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 THII_0341 34aac1b62775541d19269d4276e60282 114 PRINTS PR00607 Class IE cytochrome C signature 99 110 1.8E-8 T 15-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 THII_0341 34aac1b62775541d19269d4276e60282 114 Gene3D G3DSA:1.10.760.10 32 112 6.0E-32 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0341 34aac1b62775541d19269d4276e60282 114 SUPERFAMILY SSF46626 33 111 1.41E-18 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1456 2f135ec5d2c02c2b8cb718dac3b81470 113 Pfam PF04342 Putative member of DMT superfamily (DUF486) 10 111 2.9E-44 T 15-10-2018 IPR007437 Protein of unknown function DUF486 THII_1456 2f135ec5d2c02c2b8cb718dac3b81470 113 PIRSF PIRSF021239 1 113 1.2E-51 T 15-10-2018 IPR007437 Protein of unknown function DUF486 THII_3087 5d010f7df0f61d80003f23ff474d9c6c 170 SUPERFAMILY SSF48452 35 147 1.71E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3087 5d010f7df0f61d80003f23ff474d9c6c 170 Gene3D G3DSA:1.25.40.10 23 157 6.1E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2969 63a35b341bf004722fbf4947233ca1f2 722 SUPERFAMILY SSF55874 541 713 3.67E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2969 63a35b341bf004722fbf4947233ca1f2 722 Gene3D G3DSA:1.10.287.130 386 550 1.3E-24 T 15-10-2018 THII_2969 63a35b341bf004722fbf4947233ca1f2 722 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 601 711 2.4E-24 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2969 63a35b341bf004722fbf4947233ca1f2 722 Pfam PF02743 Cache domain 42 315 3.1E-15 T 15-10-2018 IPR033479 Double Cache domain 1 THII_2969 63a35b341bf004722fbf4947233ca1f2 722 SMART SM00387 598 713 7.2E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2969 63a35b341bf004722fbf4947233ca1f2 722 SMART SM00388 484 552 1.2E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2969 63a35b341bf004722fbf4947233ca1f2 722 SUPERFAMILY SSF47384 472 553 1.24E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2969 63a35b341bf004722fbf4947233ca1f2 722 Gene3D G3DSA:3.30.450.20 37 223 7.1E-17 T 15-10-2018 THII_2969 63a35b341bf004722fbf4947233ca1f2 722 Gene3D G3DSA:3.30.565.10 552 715 2.0E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2969 63a35b341bf004722fbf4947233ca1f2 722 Pfam PF00512 His Kinase A (phospho-acceptor) domain 484 551 5.5E-17 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2969 63a35b341bf004722fbf4947233ca1f2 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 652 5.7E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2969 63a35b341bf004722fbf4947233ca1f2 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 710 5.7E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2969 63a35b341bf004722fbf4947233ca1f2 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 673 691 5.7E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2969 63a35b341bf004722fbf4947233ca1f2 722 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 666 5.7E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0294 51fd1ef3e61cd124cab8e17cb1c4457c 60 SUPERFAMILY SSF55129 3 60 2.62E-21 T 15-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily THII_0294 51fd1ef3e61cd124cab8e17cb1c4457c 60 Gene3D G3DSA:3.30.1390.20 1 59 3.4E-26 T 15-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily THII_0294 51fd1ef3e61cd124cab8e17cb1c4457c 60 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 3.2E-19 T 15-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain THII_0294 51fd1ef3e61cd124cab8e17cb1c4457c 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 59 21.685 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0294 51fd1ef3e61cd124cab8e17cb1c4457c 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.3E-24 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0294 51fd1ef3e61cd124cab8e17cb1c4457c 60 PIRSF PIRSF002211 1 60 1.6E-28 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1392 d932dbb02e16fac95903460c1520a268 350 Gene3D G3DSA:1.10.3720.10 106 336 1.4E-18 T 15-10-2018 IPR035906 MetI-like superfamily THII_1392 d932dbb02e16fac95903460c1520a268 350 SUPERFAMILY SSF161098 113 332 2.09E-12 T 15-10-2018 IPR035906 MetI-like superfamily THII_1392 d932dbb02e16fac95903460c1520a268 350 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 343 2.5E-34 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 THII_1583 ee5c4a578ee5435cb4777fd80e06828a 459 SMART SM00044 163 365 5.0E-10 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_1583 ee5c4a578ee5435cb4777fd80e06828a 459 Gene3D G3DSA:3.40.50.2300 31 161 1.1E-12 T 15-10-2018 THII_1583 ee5c4a578ee5435cb4777fd80e06828a 459 SUPERFAMILY SSF48452 405 450 1.37E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1583 ee5c4a578ee5435cb4777fd80e06828a 459 SMART SM00448 29 151 0.0089 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1583 ee5c4a578ee5435cb4777fd80e06828a 459 Gene3D G3DSA:3.30.70.1230 198 394 4.6E-55 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1583 ee5c4a578ee5435cb4777fd80e06828a 459 SUPERFAMILY SSF52172 29 156 5.69E-11 T 15-10-2018 IPR011006 CheY-like superfamily THII_1583 ee5c4a578ee5435cb4777fd80e06828a 459 Pfam PF00072 Response regulator receiver domain 31 141 4.7E-7 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1583 ee5c4a578ee5435cb4777fd80e06828a 459 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 206 380 1.9E-33 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_1583 ee5c4a578ee5435cb4777fd80e06828a 459 SUPERFAMILY SSF55073 201 385 1.21E-53 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2515 6571c2936f83646a49585f7384946530 607 SMART SM00327 372 554 5.7E-9 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_2515 6571c2936f83646a49585f7384946530 607 Pfam PF00092 von Willebrand factor type A domain 374 522 8.2E-10 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_2515 6571c2936f83646a49585f7384946530 607 Gene3D G3DSA:3.40.50.410 367 547 1.5E-15 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_2515 6571c2936f83646a49585f7384946530 607 SUPERFAMILY SSF53300 373 544 2.23E-18 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_2085 3d63bac6f6ffbc22347c6ea68da973a7 121 SUPERFAMILY SSF52172 5 120 2.99E-32 T 15-10-2018 IPR011006 CheY-like superfamily THII_2085 3d63bac6f6ffbc22347c6ea68da973a7 121 Gene3D G3DSA:3.40.50.12740 4 121 6.0E-36 T 15-10-2018 THII_2085 3d63bac6f6ffbc22347c6ea68da973a7 121 Pfam PF00072 Response regulator receiver domain 6 118 4.5E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2085 3d63bac6f6ffbc22347c6ea68da973a7 121 SMART SM00448 4 117 1.9E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0250 efd6edd4351bb2dcb7296c8152e29b95 175 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 9 167 1.6E-13 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 THII_0250 efd6edd4351bb2dcb7296c8152e29b95 175 SUPERFAMILY SSF101327 4 169 2.35E-32 T 15-10-2018 IPR036255 YgfB-like superfamily THII_0250 efd6edd4351bb2dcb7296c8152e29b95 175 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 170 1.1E-31 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 THII_0250 efd6edd4351bb2dcb7296c8152e29b95 175 Gene3D G3DSA:1.20.120.740 1 174 9.6E-50 T 15-10-2018 THII_1566 b4dd40d913f2d8c1624320c922ef8254 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 68 108 1.5E-4 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1566 b4dd40d913f2d8c1624320c922ef8254 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 151 3.6E-8 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1566 b4dd40d913f2d8c1624320c922ef8254 258 Gene3D G3DSA:1.10.3130.10 1 66 4.9E-21 T 15-10-2018 THII_1566 b4dd40d913f2d8c1624320c922ef8254 258 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 THII_1566 b4dd40d913f2d8c1624320c922ef8254 258 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 1.3E-75 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 THII_1566 b4dd40d913f2d8c1624320c922ef8254 258 SUPERFAMILY SSF51161 2 170 8.32E-56 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_1566 b4dd40d913f2d8c1624320c922ef8254 258 Gene3D G3DSA:2.160.10.10 67 190 5.9E-38 T 15-10-2018 THII_3736 691e1c7fa8b5e69532bebd47cb9dc6a4 210 SUPERFAMILY SSF53254 8 207 1.44E-68 T 15-10-2018 IPR029033 Histidine phosphatase superfamily THII_3736 691e1c7fa8b5e69532bebd47cb9dc6a4 210 PIRSF PIRSF000709 4 178 9.0E-20 T 15-10-2018 THII_3736 691e1c7fa8b5e69532bebd47cb9dc6a4 210 Gene3D G3DSA:3.40.50.1240 7 210 1.2E-66 T 15-10-2018 IPR029033 Histidine phosphatase superfamily THII_3736 691e1c7fa8b5e69532bebd47cb9dc6a4 210 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 10 202 4.3E-68 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 THII_3736 691e1c7fa8b5e69532bebd47cb9dc6a4 210 SMART SM00855 9 163 1.1E-23 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 THII_3736 691e1c7fa8b5e69532bebd47cb9dc6a4 210 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 12 21 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 THII_1891 761bd3764a38219b5fb58eb7416c8795 161 Pfam PF13801 Heavy-metal resistance 16 140 2.6E-22 T 15-10-2018 IPR025961 Heavy-metal resistance protein THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 Gene3D G3DSA:3.40.50.620 208 406 5.7E-77 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 3.2E-5 T 15-10-2018 THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 3.2E-5 T 15-10-2018 THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 3.2E-5 T 15-10-2018 THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 Pfam PF02540 NAD synthase 215 321 6.9E-8 T 15-10-2018 IPR022310 NAD/GMP synthase THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 SUPERFAMILY SSF54810 406 526 2.48E-51 T 15-10-2018 THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 Gene3D G3DSA:3.30.300.10 407 526 1.2E-51 T 15-10-2018 THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 Pfam PF00958 GMP synthase C terminal domain 434 525 2.2E-43 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 SUPERFAMILY SSF52402 193 447 4.41E-61 T 15-10-2018 THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 Pfam PF00117 Glutamine amidotransferase class-I 11 199 8.5E-33 T 15-10-2018 IPR017926 Glutamine amidotransferase THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 204 3.4E-71 T 15-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 526 3.1E-148 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 SUPERFAMILY SSF52317 5 237 1.15E-51 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 Gene3D G3DSA:3.40.50.880 8 206 3.6E-50 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_3737 e8f08ebdd9cac84e5d7d75888346167a 526 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 526 54.414 T 15-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 THII_3554 5f3de0f37cc1c1f93273ed50342f89fe 89 SMART SM00899 12 83 1.7E-13 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 THII_3554 5f3de0f37cc1c1f93273ed50342f89fe 89 Pfam PF04023 FeoA domain 13 81 2.0E-15 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 THII_3554 5f3de0f37cc1c1f93273ed50342f89fe 89 SUPERFAMILY SSF50037 15 82 8.01E-12 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal THII_3554 5f3de0f37cc1c1f93273ed50342f89fe 89 Gene3D G3DSA:2.30.30.90 11 88 4.2E-16 T 15-10-2018 IPR038157 Ferrous iron transporter, core domain THII_2181 1f4ef700b6b8795bc37d136db92ea72d 251 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 251 9.7E-84 T 15-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 THII_2181 1f4ef700b6b8795bc37d136db92ea72d 251 SUPERFAMILY SSF51556 2 251 7.72E-81 T 15-10-2018 IPR032466 Metal-dependent hydrolase THII_2181 1f4ef700b6b8795bc37d136db92ea72d 251 Gene3D G3DSA:3.20.20.140 1 251 5.6E-86 T 15-10-2018 THII_2181 1f4ef700b6b8795bc37d136db92ea72d 251 PIRSF PIRSF005902 1 251 9.1E-75 T 15-10-2018 IPR001130 TatD family GO:0016788 THII_2181 1f4ef700b6b8795bc37d136db92ea72d 251 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 THII_2181 1f4ef700b6b8795bc37d136db92ea72d 251 Pfam PF01026 TatD related DNase 3 251 1.1E-73 T 15-10-2018 IPR001130 TatD family GO:0016788 THII_2215 14f6c76247e6c8249e9d8c81d3af0a1c 761 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 279 4.3E-103 T 15-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 THII_2215 14f6c76247e6c8249e9d8c81d3af0a1c 761 SUPERFAMILY SSF55048 122 189 4.19E-14 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding THII_2215 14f6c76247e6c8249e9d8c81d3af0a1c 761 Gene3D G3DSA:3.30.70.250 121 188 7.2E-92 T 15-10-2018 THII_2215 14f6c76247e6c8249e9d8c81d3af0a1c 761 SUPERFAMILY SSF51395 306 576 4.39E-19 T 15-10-2018 THII_2215 14f6c76247e6c8249e9d8c81d3af0a1c 761 Pfam PF00698 Acyl transferase domain 3 286 4.0E-39 T 15-10-2018 IPR014043 Acyl transferase THII_2215 14f6c76247e6c8249e9d8c81d3af0a1c 761 TIGRFAM TIGR02814 pfaD_fam: PfaD family protein 313 754 5.4E-212 T 15-10-2018 IPR014179 PfaD family protein KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 THII_2215 14f6c76247e6c8249e9d8c81d3af0a1c 761 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 341 1.4E-26 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain THII_2215 14f6c76247e6c8249e9d8c81d3af0a1c 761 SUPERFAMILY SSF52151 2 287 1.73E-59 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_2215 14f6c76247e6c8249e9d8c81d3af0a1c 761 Gene3D G3DSA:3.40.366.10 4 276 7.2E-92 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 THII_2215 14f6c76247e6c8249e9d8c81d3af0a1c 761 Gene3D G3DSA:3.20.20.70 320 675 1.2E-43 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0980 19bd513184b1c57bf24873bf3f0d5650 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 369 5.2E-162 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 THII_0980 19bd513184b1c57bf24873bf3f0d5650 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 365 54.351 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 THII_0980 19bd513184b1c57bf24873bf3f0d5650 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 368 7.5E-155 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 THII_0980 19bd513184b1c57bf24873bf3f0d5650 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 362 1.1E-87 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 THII_0980 19bd513184b1c57bf24873bf3f0d5650 376 Gene3D G3DSA:3.20.20.105 1 370 3.8E-161 T 15-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 THII_0980 19bd513184b1c57bf24873bf3f0d5650 376 SUPERFAMILY SSF51713 3 364 1.03E-155 T 15-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 THII_0578 7a5578c9fe4022268a1e5fdd20e3762b 405 SMART SM00825 Beta-ketoacyl synthase 4 405 7.7E-12 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THII_0578 7a5578c9fe4022268a1e5fdd20e3762b 405 Gene3D G3DSA:3.40.47.10 1 252 1.0E-62 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_0578 7a5578c9fe4022268a1e5fdd20e3762b 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 2.0E-28 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal THII_0578 7a5578c9fe4022268a1e5fdd20e3762b 405 SUPERFAMILY SSF53901 212 401 2.11E-58 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_0578 7a5578c9fe4022268a1e5fdd20e3762b 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 5.2E-42 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal THII_0578 7a5578c9fe4022268a1e5fdd20e3762b 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site THII_0578 7a5578c9fe4022268a1e5fdd20e3762b 405 SUPERFAMILY SSF53901 2 251 3.68E-62 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_0578 7a5578c9fe4022268a1e5fdd20e3762b 405 Gene3D G3DSA:3.40.47.10 258 403 9.2E-46 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 SUPERFAMILY SSF52172 2 134 2.99E-43 T 15-10-2018 IPR011006 CheY-like superfamily THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 Pfam PF00072 Response regulator receiver domain 2 113 8.4E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 Gene3D G3DSA:3.30.565.10 204 359 1.2E-50 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 Gene3D G3DSA:1.10.287.130 144 203 1.2E-50 T 15-10-2018 THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 252 361 3.1E-24 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 302 1.9E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 340 1.9E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 359 1.9E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 Gene3D G3DSA:3.40.50.2300 1 142 7.4E-42 T 15-10-2018 THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 SMART SM00448 1 113 4.8E-41 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 SMART SM00387 251 362 1.9E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 SUPERFAMILY SSF47384 125 207 2.35E-8 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0775 937d49f0d75840a5ad8144a52ec4d4aa 364 SUPERFAMILY SSF55874 196 360 1.44E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1507 b1470629c800137d2e1f546774f8cd7b 122 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 9 122 9.6E-27 T 15-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 THII_1507 b1470629c800137d2e1f546774f8cd7b 122 Gene3D G3DSA:1.20.120.330 7 122 1.0E-37 T 15-10-2018 THII_1507 b1470629c800137d2e1f546774f8cd7b 122 SUPERFAMILY SSF81593 6 121 6.67E-31 T 15-10-2018 THII_1507 b1470629c800137d2e1f546774f8cd7b 122 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 9 122 5.0E-26 T 15-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 THII_3037 3b658085d51fb4c85c225cab76c22012 265 SMART SM00332 1 249 4.3E-19 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3037 3b658085d51fb4c85c225cab76c22012 265 Gene3D G3DSA:3.60.40.10 1 251 4.9E-66 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3037 3b658085d51fb4c85c225cab76c22012 265 SUPERFAMILY SSF81606 1 250 5.89E-62 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3037 3b658085d51fb4c85c225cab76c22012 265 SMART SM00331 9 251 1.6E-29 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3037 3b658085d51fb4c85c225cab76c22012 265 Pfam PF13672 Protein phosphatase 2C 15 226 5.1E-17 T 15-10-2018 THII_2763 d21f47814c20be0c8ba03f2071af0c08 67 PRINTS PR00050 Cold shock protein signature 40 58 2.5E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 THII_2763 d21f47814c20be0c8ba03f2071af0c08 67 PRINTS PR00050 Cold shock protein signature 4 19 2.5E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 THII_2763 d21f47814c20be0c8ba03f2071af0c08 67 PRINTS PR00050 Cold shock protein signature 25 34 2.5E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 THII_2763 d21f47814c20be0c8ba03f2071af0c08 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 15-10-2018 IPR019844 Cold-shock conserved site THII_2763 d21f47814c20be0c8ba03f2071af0c08 67 SMART SM00357 3 67 2.1E-26 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 THII_2763 d21f47814c20be0c8ba03f2071af0c08 67 Gene3D G3DSA:2.40.50.140 1 64 1.8E-28 T 15-10-2018 THII_2763 d21f47814c20be0c8ba03f2071af0c08 67 SUPERFAMILY SSF50249 1 65 2.01E-24 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_2763 d21f47814c20be0c8ba03f2071af0c08 67 PIRSF PIRSF002599 1 66 3.5E-23 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 THII_2763 d21f47814c20be0c8ba03f2071af0c08 67 Pfam PF00313 'Cold-shock' DNA-binding domain 2 63 1.4E-29 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 THII_3218 dd8f7f28fbfdbc1447340a5bd7ddafca 138 Gene3D G3DSA:3.40.50.1010 1 134 3.8E-24 T 15-10-2018 THII_3218 dd8f7f28fbfdbc1447340a5bd7ddafca 138 Pfam PF01850 PIN domain 2 121 5.1E-11 T 15-10-2018 IPR002716 PIN domain THII_3218 dd8f7f28fbfdbc1447340a5bd7ddafca 138 SUPERFAMILY SSF88723 1 129 8.97E-22 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_3033 8928412811ec587a861574ecc12bec69 442 SUPERFAMILY SSF47384 191 271 1.35E-18 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3033 8928412811ec587a861574ecc12bec69 442 Gene3D G3DSA:1.10.287.130 198 274 2.8E-22 T 15-10-2018 THII_3033 8928412811ec587a861574ecc12bec69 442 Pfam PF11808 Domain of unknown function (DUF3329) 5 90 1.5E-24 T 15-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 THII_3033 8928412811ec587a861574ecc12bec69 442 SMART SM00388 204 271 4.4E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3033 8928412811ec587a861574ecc12bec69 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 427 3.6E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3033 8928412811ec587a861574ecc12bec69 442 SUPERFAMILY SSF55785 89 162 2.33E-5 T 15-10-2018 IPR035965 PAS domain superfamily THII_3033 8928412811ec587a861574ecc12bec69 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 270 1.2E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3033 8928412811ec587a861574ecc12bec69 442 SMART SM00387 316 428 5.6E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3033 8928412811ec587a861574ecc12bec69 442 SUPERFAMILY SSF55874 260 430 8.25E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3033 8928412811ec587a861574ecc12bec69 442 SMART SM00091 97 164 0.0063 T 15-10-2018 IPR000014 PAS domain THII_3033 8928412811ec587a861574ecc12bec69 442 Gene3D G3DSA:3.30.450.20 101 197 8.9E-6 T 15-10-2018 THII_3033 8928412811ec587a861574ecc12bec69 442 Gene3D G3DSA:3.30.565.10 280 437 5.5E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3033 8928412811ec587a861574ecc12bec69 442 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 4.6E-133 T 15-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 THII_3033 8928412811ec587a861574ecc12bec69 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 1.1E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3033 8928412811ec587a861574ecc12bec69 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 1.1E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3033 8928412811ec587a861574ecc12bec69 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.1E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3033 8928412811ec587a861574ecc12bec69 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.1E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3910 e050cc92137be3df09bdb1946252d012 538 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 509 532 3.9E-5 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 THII_3910 e050cc92137be3df09bdb1946252d012 538 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 264 3.3E-6 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 THII_3910 e050cc92137be3df09bdb1946252d012 538 Gene3D G3DSA:3.40.50.300 295 537 4.2E-67 T 15-10-2018 THII_3910 e050cc92137be3df09bdb1946252d012 538 SUPERFAMILY SSF52540 279 529 1.77E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3910 e050cc92137be3df09bdb1946252d012 538 Pfam PF00005 ABC transporter 307 458 2.3E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_3910 e050cc92137be3df09bdb1946252d012 538 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_3910 e050cc92137be3df09bdb1946252d012 538 SMART SM00382 315 507 4.8E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3910 e050cc92137be3df09bdb1946252d012 538 SMART SM00382 35 236 1.4E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3910 e050cc92137be3df09bdb1946252d012 538 Gene3D G3DSA:3.40.50.300 3 293 1.0E-80 T 15-10-2018 THII_3910 e050cc92137be3df09bdb1946252d012 538 Pfam PF00005 ABC transporter 27 185 2.4E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_3910 e050cc92137be3df09bdb1946252d012 538 SUPERFAMILY SSF52540 5 257 4.99E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3910 e050cc92137be3df09bdb1946252d012 538 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_1510 3fa6a3ab80872f490c88fcee7efea568 483 SUPERFAMILY SSF56059 35 471 7.74E-64 T 15-10-2018 THII_1510 3fa6a3ab80872f490c88fcee7efea568 483 Gene3D G3DSA:3.30.1490.270 353 413 1.8E-25 T 15-10-2018 THII_1510 3fa6a3ab80872f490c88fcee7efea568 483 PIRSF PIRSF005522 1 483 4.1E-222 T 15-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 THII_1510 3fa6a3ab80872f490c88fcee7efea568 483 Pfam PF14403 Circularly permuted ATP-grasp type 2 80 456 6.0E-161 T 15-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 THII_1510 3fa6a3ab80872f490c88fcee7efea568 483 Gene3D G3DSA:3.40.50.11290 219 316 1.1E-38 T 15-10-2018 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 Pfam PF06723 MreB/Mbl protein 11 337 7.5E-148 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 Gene3D G3DSA:3.90.640.10 189 262 1.6E-127 T 15-10-2018 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 SUPERFAMILY SSF53067 9 151 1.94E-37 T 15-10-2018 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 338 2.4E-160 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 71 94 1.6E-64 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 51 69 1.6E-64 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 1.6E-64 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 1.6E-64 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 1.6E-64 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 Gene3D G3DSA:3.30.420.40 14 330 1.6E-127 T 15-10-2018 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 Gene3D G3DSA:3.30.420.40 157 320 1.6E-127 T 15-10-2018 THII_3518 5e2c6d677b1a58f9a649f26c19974cba 348 SUPERFAMILY SSF53067 153 335 1.56E-46 T 15-10-2018 THII_3263 1d2dc7c9af19f84f761fa559671be800 258 Pfam PF02613 Nitrate reductase delta subunit 63 185 3.7E-22 T 15-10-2018 IPR020945 DMSO/Nitrate reductase chaperone THII_3263 1d2dc7c9af19f84f761fa559671be800 258 Gene3D G3DSA:1.10.3480.10 27 223 7.0E-37 T 15-10-2018 THII_3263 1d2dc7c9af19f84f761fa559671be800 258 SUPERFAMILY SSF89155 56 221 1.7E-30 T 15-10-2018 IPR036411 TorD-like superfamily THII_1568 2a0077b643efeef1cfc02775eeddf705 295 Gene3D G3DSA:3.20.20.70 1 295 1.7E-70 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_1568 2a0077b643efeef1cfc02775eeddf705 295 Pfam PF04055 Radical SAM superfamily 5 143 3.0E-19 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_1568 2a0077b643efeef1cfc02775eeddf705 295 SUPERFAMILY SSF102114 3 242 3.27E-57 T 15-10-2018 THII_1568 2a0077b643efeef1cfc02775eeddf705 295 Pfam PF06463 Molybdenum Cofactor Synthesis C 149 277 3.6E-38 T 15-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_1568 2a0077b643efeef1cfc02775eeddf705 295 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 295 3.5E-92 T 15-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 THII_3288 1bb9fdb84aae4c5db6c52ebfbd23034d 153 PIRSF PIRSF029256 1 153 3.3E-64 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 THII_3288 1bb9fdb84aae4c5db6c52ebfbd23034d 153 SUPERFAMILY SSF75217 2 150 8.5E-46 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases THII_3288 1bb9fdb84aae4c5db6c52ebfbd23034d 153 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 3 150 4.7E-58 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 THII_3288 1bb9fdb84aae4c5db6c52ebfbd23034d 153 Pfam PF00588 SpoU rRNA Methylase family 2 142 5.6E-35 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 THII_3288 1bb9fdb84aae4c5db6c52ebfbd23034d 153 Gene3D G3DSA:3.40.1280.10 1 153 2.8E-64 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THII_3288 1bb9fdb84aae4c5db6c52ebfbd23034d 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.513 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 450 2.4E-14 T 15-10-2018 IPR000014 PAS domain THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 Gene3D G3DSA:3.30.70.270 443 615 2.0E-53 T 15-10-2018 THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 Pfam PF00990 Diguanylate cyclase, GGDEF domain 454 610 1.4E-41 T 15-10-2018 IPR000160 GGDEF domain THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 SMART SM00267 443 615 4.3E-53 T 15-10-2018 IPR000160 GGDEF domain THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 SMART SM00091 326 392 1.4E-6 T 15-10-2018 IPR000014 PAS domain THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 Pfam PF05231 MASE1 28 314 1.1E-25 T 15-10-2018 IPR007895 MASE1 THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 Pfam PF00563 EAL domain 636 871 4.9E-61 T 15-10-2018 IPR001633 EAL domain THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 SUPERFAMILY SSF55785 313 441 2.62E-18 T 15-10-2018 IPR035965 PAS domain superfamily THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 Gene3D G3DSA:3.20.20.450 618 874 5.1E-79 T 15-10-2018 IPR035919 EAL domain superfamily THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 450 614 4.1E-42 T 15-10-2018 IPR000160 GGDEF domain THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 SMART SM00052 628 875 4.6E-58 T 15-10-2018 IPR001633 EAL domain THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 SUPERFAMILY SSF141868 634 871 5.75E-69 T 15-10-2018 IPR035919 EAL domain superfamily THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 Gene3D G3DSA:3.30.450.20 334 441 5.4E-23 T 15-10-2018 THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 SUPERFAMILY SSF55073 459 614 3.14E-45 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2963 4dd0a488adbf73cc397d0072d8ef5771 875 Pfam PF00989 PAS fold 331 440 4.5E-12 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_0295 9d2415ac9ede3660f2e0d461e01d6ad7 169 ProSitePatterns PS00585 Ribosomal protein S5 signature. 31 63 - T 15-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site THII_0295 9d2415ac9ede3660f2e0d461e01d6ad7 169 Pfam PF03719 Ribosomal protein S5, C-terminal domain 90 160 3.4E-28 T 15-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 THII_0295 9d2415ac9ede3660f2e0d461e01d6ad7 169 Gene3D G3DSA:3.30.160.20 5 75 2.4E-30 T 15-10-2018 THII_0295 9d2415ac9ede3660f2e0d461e01d6ad7 169 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 166 34.262 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 THII_0295 9d2415ac9ede3660f2e0d461e01d6ad7 169 Gene3D G3DSA:3.30.230.10 77 169 9.6E-35 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_0295 9d2415ac9ede3660f2e0d461e01d6ad7 169 Pfam PF00333 Ribosomal protein S5, N-terminal domain 15 78 1.2E-28 T 15-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 THII_0295 9d2415ac9ede3660f2e0d461e01d6ad7 169 SUPERFAMILY SSF54768 11 79 3.03E-23 T 15-10-2018 THII_0295 9d2415ac9ede3660f2e0d461e01d6ad7 169 SUPERFAMILY SSF54211 83 162 1.64E-25 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_0295 9d2415ac9ede3660f2e0d461e01d6ad7 169 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 166 2.4E-65 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 THII_1114 83376f0a4996b4d86b40d9069d40d09f 172 SUPERFAMILY SSF53335 32 153 4.82E-16 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1114 83376f0a4996b4d86b40d9069d40d09f 172 Pfam PF08241 Methyltransferase domain 87 135 1.6E-7 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 THII_1114 83376f0a4996b4d86b40d9069d40d09f 172 Gene3D G3DSA:3.40.50.150 29 165 3.4E-13 T 15-10-2018 THII_1212 d6baa0885f8c070dee8a8e243ba3e024 296 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 294 1.1E-141 T 15-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 THII_1212 d6baa0885f8c070dee8a8e243ba3e024 296 SUPERFAMILY SSF53686 3 294 2.75E-91 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THII_1212 d6baa0885f8c070dee8a8e243ba3e024 296 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 283 8.8E-65 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme THII_1212 d6baa0885f8c070dee8a8e243ba3e024 296 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 15-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 THII_1212 d6baa0885f8c070dee8a8e243ba3e024 296 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 294 2.4E-120 T 15-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 THII_1212 d6baa0885f8c070dee8a8e243ba3e024 296 Gene3D G3DSA:3.40.50.1100 10 290 1.9E-107 T 15-10-2018 THII_1212 d6baa0885f8c070dee8a8e243ba3e024 296 Gene3D G3DSA:3.40.50.1100 37 142 1.9E-107 T 15-10-2018 THII_0857 4145bc1f4c983599030248045186b208 183 SUPERFAMILY SSF54523 31 162 1.02E-12 T 15-10-2018 THII_0857 4145bc1f4c983599030248045186b208 183 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 28 170 2.1E-14 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 THII_0857 4145bc1f4c983599030248045186b208 183 Gene3D G3DSA:3.30.700.10 31 173 6.0E-9 T 15-10-2018 THII_0857 4145bc1f4c983599030248045186b208 183 Pfam PF07963 Prokaryotic N-terminal methylation motif 28 50 4.7E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0857 4145bc1f4c983599030248045186b208 183 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 28 51 1.5E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0857 4145bc1f4c983599030248045186b208 183 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 29 49 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0426 9bf1ad438bebf82b28004def93d89916 183 SMART SM00318 45 167 8.4E-27 T 15-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 THII_0426 9bf1ad438bebf82b28004def93d89916 183 ProSitePatterns PS01284 Thermonuclease family signature 2. 112 122 - T 15-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 THII_0426 9bf1ad438bebf82b28004def93d89916 183 Pfam PF00565 Staphylococcal nuclease homologue 72 167 1.5E-21 T 15-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 THII_0426 9bf1ad438bebf82b28004def93d89916 183 SUPERFAMILY SSF50199 46 168 2.22E-33 T 15-10-2018 THII_0426 9bf1ad438bebf82b28004def93d89916 183 Gene3D G3DSA:2.40.50.90 42 172 1.0E-30 T 15-10-2018 IPR035437 SNase-like, OB-fold superfamily THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 1.3E-129 T 15-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 Gene3D G3DSA:3.40.50.720 4 328 1.1E-148 T 15-10-2018 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 SMART SM00846 3 155 1.1E-93 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 5.1E-40 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 5.1E-40 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 5.1E-40 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 5.1E-40 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 5.1E-40 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 SUPERFAMILY SSF51735 1 182 3.62E-64 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 Gene3D G3DSA:3.30.360.10 154 318 1.1E-148 T 15-10-2018 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 PIRSF PIRSF000149 1 337 1.7E-135 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 SUPERFAMILY SSF55347 155 317 8.04E-70 T 15-10-2018 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 2.9E-63 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 106 4.9E-38 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0784 c6b743acc5fe2b0fde0340d011ba027a 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 15-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_0152 6989d1724376e5f853e9117e8271d765 341 Gene3D G3DSA:3.20.20.70 5 339 1.4E-147 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0152 6989d1724376e5f853e9117e8271d765 341 PIRSF PIRSF001415 5 338 7.9E-149 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 THII_0152 6989d1724376e5f853e9117e8271d765 341 Pfam PF00490 Delta-aminolevulinic acid dehydratase 15 333 1.8E-142 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 THII_0152 6989d1724376e5f853e9117e8271d765 341 SUPERFAMILY SSF51569 9 336 2.78E-143 T 15-10-2018 THII_0152 6989d1724376e5f853e9117e8271d765 341 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 254 266 - T 15-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 THII_0152 6989d1724376e5f853e9117e8271d765 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 162 181 1.2E-56 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 THII_0152 6989d1724376e5f853e9117e8271d765 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 309 328 1.2E-56 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 THII_0152 6989d1724376e5f853e9117e8271d765 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 279 294 1.2E-56 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 THII_0152 6989d1724376e5f853e9117e8271d765 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 254 270 1.2E-56 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 THII_0152 6989d1724376e5f853e9117e8271d765 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 131 145 1.2E-56 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 THII_0152 6989d1724376e5f853e9117e8271d765 341 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 200 219 1.2E-56 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 THII_0152 6989d1724376e5f853e9117e8271d765 341 SMART SM01004 11 335 1.7E-239 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 THII_1952 57a84476ef39b19eac3e2be320508721 449 Gene3D G3DSA:3.40.50.150 15 128 2.4E-9 T 15-10-2018 THII_1952 57a84476ef39b19eac3e2be320508721 449 SUPERFAMILY SSF53335 266 416 2.29E-13 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1952 57a84476ef39b19eac3e2be320508721 449 SUPERFAMILY SSF53335 30 111 5.75E-7 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0983 b8bdeeacdffcf8c5ae40f5018a3734d2 76 Pfam PF01206 Sulfurtransferase TusA 7 75 1.2E-23 T 15-10-2018 IPR001455 TusA-like domain THII_0983 b8bdeeacdffcf8c5ae40f5018a3734d2 76 Gene3D G3DSA:3.30.110.40 1 76 8.8E-30 T 15-10-2018 IPR036868 TusA-like domain superfamily THII_0983 b8bdeeacdffcf8c5ae40f5018a3734d2 76 SUPERFAMILY SSF64307 3 75 2.09E-24 T 15-10-2018 IPR036868 TusA-like domain superfamily THII_0983 b8bdeeacdffcf8c5ae40f5018a3734d2 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 8 32 - T 15-10-2018 IPR001455 TusA-like domain THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 Gene3D G3DSA:3.40.50.300 173 348 6.2E-49 T 15-10-2018 THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 SUPERFAMILY SSF52540 4 165 1.87E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 180 200 2.4E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 250 268 2.4E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 433 3.8E-167 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 354 433 3.7E-29 T 15-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 343 3.5E-29 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 158 1.8E-18 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 Hamap MF_00195 GTPase Der [der]. 2 436 36.243 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 Gene3D G3DSA:3.40.50.300 5 163 6.1E-36 T 15-10-2018 THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 SUPERFAMILY SSF52540 137 440 2.97E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.6E-23 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 Pfam PF01926 50S ribosome-binding GTPase 179 297 1.6E-23 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 Gene3D G3DSA:3.30.300.20 353 435 3.4E-25 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta THII_2258 1af38c45818ad4ec403fcf5b125829f2 464 PIRSF PIRSF006485 1 441 3.6E-165 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 THII_2123 2535a21fa99e985e5b65576791761cdc 1149 Pfam PF07690 Major Facilitator Superfamily 53 379 2.2E-17 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 THII_2123 2535a21fa99e985e5b65576791761cdc 1149 SMART SM00563 449 560 4.7E-22 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 THII_2123 2535a21fa99e985e5b65576791761cdc 1149 Pfam PF00501 AMP-binding enzyme 629 1049 1.1E-78 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 THII_2123 2535a21fa99e985e5b65576791761cdc 1149 ProSitePatterns PS00455 Putative AMP-binding domain signature. 793 804 - T 15-10-2018 IPR020845 AMP-binding, conserved site THII_2123 2535a21fa99e985e5b65576791761cdc 1149 SUPERFAMILY SSF103473 11 418 2.75E-31 T 15-10-2018 IPR036259 MFS transporter superfamily THII_2123 2535a21fa99e985e5b65576791761cdc 1149 Gene3D G3DSA:3.40.50.12780 612 1049 5.7E-87 T 15-10-2018 THII_2123 2535a21fa99e985e5b65576791761cdc 1149 SUPERFAMILY SSF69593 404 595 4.32E-25 T 15-10-2018 THII_2123 2535a21fa99e985e5b65576791761cdc 1149 Gene3D G3DSA:1.20.1250.20 9 418 7.3E-31 T 15-10-2018 THII_2123 2535a21fa99e985e5b65576791761cdc 1149 SUPERFAMILY SSF56801 622 1148 9.55E-105 T 15-10-2018 THII_2123 2535a21fa99e985e5b65576791761cdc 1149 Pfam PF01553 Acyltransferase 434 556 6.8E-19 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 THII_2123 2535a21fa99e985e5b65576791761cdc 1149 Gene3D G3DSA:3.30.300.30 1051 1148 1.4E-8 T 15-10-2018 THII_3551 069997909aecfd01d11876bd7cab9a1d 76 SUPERFAMILY SSF46785 2 73 1.28E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_3551 069997909aecfd01d11876bd7cab9a1d 76 Pfam PF09012 FeoC like transcriptional regulator 2 70 3.1E-21 T 15-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC THII_0114 79ba4a0281bc31c329bedc2ad619297b 354 SUPERFAMILY SSF117892 57 179 2.62E-11 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily THII_0114 79ba4a0281bc31c329bedc2ad619297b 354 Gene3D G3DSA:3.30.479.30 56 179 1.0E-7 T 15-10-2018 THII_0114 79ba4a0281bc31c329bedc2ad619297b 354 Pfam PF01145 SPFH domain / Band 7 family 12 191 3.9E-15 T 15-10-2018 IPR001107 Band 7 domain THII_2450 6761b3b0b5b62c807bd455e57285658d 472 Pfam PF13183 4Fe-4S dicluster domain 311 378 4.0E-8 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2450 6761b3b0b5b62c807bd455e57285658d 472 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 17 455 4.4E-142 T 15-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 THII_2450 6761b3b0b5b62c807bd455e57285658d 472 Pfam PF02589 LUD domain 69 296 4.5E-54 T 15-10-2018 IPR003741 LUD domain THII_2450 6761b3b0b5b62c807bd455e57285658d 472 SUPERFAMILY SSF46548 273 395 2.54E-17 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_2450 6761b3b0b5b62c807bd455e57285658d 472 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 314 325 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2450 6761b3b0b5b62c807bd455e57285658d 472 Gene3D G3DSA:3.40.50.10420 121 297 6.4E-17 T 15-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily THII_2450 6761b3b0b5b62c807bd455e57285658d 472 Pfam PF11870 Domain of unknown function (DUF3390) 389 470 1.1E-8 T 15-10-2018 IPR024569 4Fe-4S binding protein, C-terminal THII_2450 6761b3b0b5b62c807bd455e57285658d 472 SUPERFAMILY SSF100950 62 297 5.86E-43 T 15-10-2018 IPR037171 NagB/RpiA transferase-like THII_0702 dc5400f59894a86fb73be3bed022922e 414 Gene3D G3DSA:3.40.50.300 101 258 2.3E-12 T 15-10-2018 THII_0702 dc5400f59894a86fb73be3bed022922e 414 Pfam PF13191 AAA ATPase domain 107 224 1.4E-8 T 15-10-2018 THII_0702 dc5400f59894a86fb73be3bed022922e 414 SUPERFAMILY SSF52540 106 341 2.33E-20 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3928 d1a83b95205f7c7aeeb1d5a7b09b56f6 357 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 11 354 1.5E-95 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM THII_3928 d1a83b95205f7c7aeeb1d5a7b09b56f6 357 PIRSF PIRSF019169 1 355 5.8E-103 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM THII_3928 d1a83b95205f7c7aeeb1d5a7b09b56f6 357 Gene3D G3DSA:3.30.1490.300 89 148 3.4E-74 T 15-10-2018 THII_3928 d1a83b95205f7c7aeeb1d5a7b09b56f6 357 SUPERFAMILY SSF53067 192 352 3.42E-21 T 15-10-2018 THII_3928 d1a83b95205f7c7aeeb1d5a7b09b56f6 357 Gene3D G3DSA:3.30.420.40 12 352 3.4E-74 T 15-10-2018 THII_3928 d1a83b95205f7c7aeeb1d5a7b09b56f6 357 Gene3D G3DSA:3.30.420.40 187 318 3.4E-74 T 15-10-2018 THII_3928 d1a83b95205f7c7aeeb1d5a7b09b56f6 357 Pfam PF11104 Type IV pilus assembly protein PilM; 13 354 5.0E-118 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM THII_3928 d1a83b95205f7c7aeeb1d5a7b09b56f6 357 SUPERFAMILY SSF53067 61 176 1.08E-6 T 15-10-2018 THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 Gene3D G3DSA:2.60.120.380 267 366 5.6E-8 T 15-10-2018 THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 SUPERFAMILY SSF49299 666 755 2.88E-16 T 15-10-2018 IPR035986 PKD domain superfamily THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 Pfam PF00801 PKD domain 601 656 2.4E-10 T 15-10-2018 IPR000601 PKD domain THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 Pfam PF00801 PKD domain 388 447 7.8E-11 T 15-10-2018 IPR000601 PKD domain THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 Pfam PF00801 PKD domain 691 740 1.1E-7 T 15-10-2018 IPR000601 PKD domain THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 SUPERFAMILY SSF49299 338 453 7.06E-16 T 15-10-2018 IPR035986 PKD domain superfamily THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 285 350 4.9E-6 T 15-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 Gene3D G3DSA:2.60.40.10 367 458 6.1E-17 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 Gene3D G3DSA:2.60.40.10 601 659 1.2E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 Gene3D G3DSA:2.60.120.380 479 576 2.1E-5 T 15-10-2018 THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 Gene3D G3DSA:2.60.40.10 668 760 5.2E-16 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 SUPERFAMILY SSF49299 600 664 1.2E-10 T 15-10-2018 IPR035986 PKD domain superfamily THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 SMART SM00089 584 667 8.4E-8 T 15-10-2018 IPR022409 PKD/Chitinase domain THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 SMART SM00089 377 550 5.9E-10 T 15-10-2018 IPR022409 PKD/Chitinase domain THII_3283 428b15f1ec7cf5e991a0570c481d8780 1028 SMART SM00089 678 756 1.0E-7 T 15-10-2018 IPR022409 PKD/Chitinase domain THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 2.6E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.6E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 2.6E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 425 536 7.3E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 SMART SM00388 304 376 1.9E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 61 116 1.7E-6 T 15-10-2018 IPR033414 Periplasmic sensor domain THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 Gene3D G3DSA:1.10.287.130 291 376 3.2E-17 T 15-10-2018 THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 305 376 4.3E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 SUPERFAMILY SSF47384 291 377 2.94E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 SMART SM00387 424 537 1.1E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 Gene3D G3DSA:3.30.565.10 377 540 4.1E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3345 9c86cec69d258de8ae86d4d026ca5607 566 SUPERFAMILY SSF55874 366 536 4.58E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0579 d498607bdfff1ae8ec70b4fd9130c69f 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 50.747 T 15-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 THII_0579 d498607bdfff1ae8ec70b4fd9130c69f 171 Pfam PF07977 FabA-like domain 28 158 5.5E-49 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 THII_0579 d498607bdfff1ae8ec70b4fd9130c69f 171 Gene3D G3DSA:3.10.129.10 1 171 1.9E-65 T 15-10-2018 THII_0579 d498607bdfff1ae8ec70b4fd9130c69f 171 SUPERFAMILY SSF54637 3 168 3.08E-56 T 15-10-2018 IPR029069 HotDog domain superfamily THII_0579 d498607bdfff1ae8ec70b4fd9130c69f 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 3.3E-93 T 15-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 THII_1715 f5c22562c6dc14c2da72a8c9d99a5b6f 252 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 251 39.678 T 15-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 THII_1715 f5c22562c6dc14c2da72a8c9d99a5b6f 252 SUPERFAMILY SSF64167 1 250 1.44E-83 T 15-10-2018 THII_1715 f5c22562c6dc14c2da72a8c9d99a5b6f 252 Gene3D G3DSA:3.40.1210.10 1 252 4.9E-94 T 15-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 THII_1715 f5c22562c6dc14c2da72a8c9d99a5b6f 252 Pfam PF01975 Survival protein SurE 3 185 4.9E-59 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 THII_1715 f5c22562c6dc14c2da72a8c9d99a5b6f 252 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 236 1.0E-68 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 THII_2199 f1c1012eb44f16ac909e5c8160bfb539 222 Pfam PF03400 IS1 transposase 90 215 4.2E-20 T 15-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 Pfam PF04607 Region found in RelA / SpoT proteins 245 350 4.6E-25 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 SUPERFAMILY SSF109604 15 199 1.05E-66 T 15-10-2018 THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 Gene3D G3DSA:3.30.70.260 655 734 1.4E-12 T 15-10-2018 THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 SUPERFAMILY SSF81271 399 471 4.19E-21 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 SUPERFAMILY SSF55021 657 732 2.86E-6 T 15-10-2018 THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 SMART SM00471 50 162 2.2E-7 T 15-10-2018 IPR003607 HD/PDEase domain THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 Gene3D G3DSA:1.10.3210.10 9 199 5.2E-72 T 15-10-2018 THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 Pfam PF13328 HD domain 35 184 8.6E-47 T 15-10-2018 IPR003607 HD/PDEase domain THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 35 729 1.1E-215 T 15-10-2018 IPR004811 RelA/SpoT family GO:0015969 THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 SUPERFAMILY SSF81301 190 416 5.07E-47 T 15-10-2018 THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 Pfam PF13291 ACT domain 655 731 1.0E-12 T 15-10-2018 IPR002912 ACT domain THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 Gene3D G3DSA:3.30.460.10 202 342 3.1E-38 T 15-10-2018 THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 SMART SM00954 244 362 3.0E-38 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 Gene3D G3DSA:3.10.20.30 405 480 1.4E-28 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_0249 673e37818f3b5ce1d3c7b99061be62af 734 Pfam PF02824 TGS domain 412 471 4.6E-19 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 THII_0534 7155d2689b80713c24a3886eae840c24 535 Gene3D G3DSA:1.20.1220.12 413 534 5.2E-47 T 15-10-2018 THII_0534 7155d2689b80713c24a3886eae840c24 535 Gene3D G3DSA:3.20.20.360 8 412 6.4E-194 T 15-10-2018 THII_0534 7155d2689b80713c24a3886eae840c24 535 PIRSF PIRSF001363 6 535 1.7E-253 T 15-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 THII_0534 7155d2689b80713c24a3886eae840c24 535 ProSitePatterns PS00510 Malate synthase signature. 268 283 - T 15-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 THII_0534 7155d2689b80713c24a3886eae840c24 535 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 26 534 2.7E-246 T 15-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 THII_0534 7155d2689b80713c24a3886eae840c24 535 Pfam PF01274 Malate synthase 14 534 1.1E-212 T 15-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 THII_0534 7155d2689b80713c24a3886eae840c24 535 SUPERFAMILY SSF51645 12 534 4.05E-200 T 15-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 THII_2567 9f3f677cd9af81a7a9e73718ce3236c9 353 Pfam PF03116 NQR2, RnfD, RnfE family 6 343 1.4E-106 T 15-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 THII_2567 9f3f677cd9af81a7a9e73718ce3236c9 353 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 7 344 6.0E-112 T 15-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 THII_2567 9f3f677cd9af81a7a9e73718ce3236c9 353 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 2 345 25.786 T 15-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 THII_3881 f7d0dd4bda56e8c7bba15f80975adea8 248 Gene3D G3DSA:1.10.1270.20 166 248 3.5E-33 T 15-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 THII_3881 f7d0dd4bda56e8c7bba15f80975adea8 248 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 248 104.617 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 THII_3881 f7d0dd4bda56e8c7bba15f80975adea8 248 SUPERFAMILY SSF75217 1 244 4.58E-95 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases THII_3881 f7d0dd4bda56e8c7bba15f80975adea8 248 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 4.9E-93 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 THII_3881 f7d0dd4bda56e8c7bba15f80975adea8 248 PIRSF PIRSF000386 1 246 7.4E-93 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 THII_3881 f7d0dd4bda56e8c7bba15f80975adea8 248 Gene3D G3DSA:3.40.1280.10 1 165 1.8E-61 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THII_3881 f7d0dd4bda56e8c7bba15f80975adea8 248 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 219 2.2E-61 T 15-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 THII_3347 5167eab50c041607ac1e4443fcd61768 1179 SUPERFAMILY SSF50182 831 895 1.41E-13 T 15-10-2018 IPR010920 LSM domain superfamily THII_3347 5167eab50c041607ac1e4443fcd61768 1179 SMART SM00100 1020 1138 9.3E-22 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_3347 5167eab50c041607ac1e4443fcd61768 1179 Gene3D G3DSA:3.40.50.2300 156 307 3.2E-70 T 15-10-2018 THII_3347 5167eab50c041607ac1e4443fcd61768 1179 SUPERFAMILY SSF82689 899 997 2.75E-13 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 THII_3347 5167eab50c041607ac1e4443fcd61768 1179 SUPERFAMILY SSF53822 30 406 3.16E-55 T 15-10-2018 IPR028082 Periplasmic binding protein-like I THII_3347 5167eab50c041607ac1e4443fcd61768 1179 Gene3D G3DSA:2.30.30.60 845 895 8.2E-7 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily THII_3347 5167eab50c041607ac1e4443fcd61768 1179 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 1088 1105 - T 15-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site THII_3347 5167eab50c041607ac1e4443fcd61768 1179 SUPERFAMILY SSF51206 1014 1149 1.19E-32 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like THII_3347 5167eab50c041607ac1e4443fcd61768 1179 Gene3D G3DSA:3.30.70.100 907 989 1.8E-6 T 15-10-2018 THII_3347 5167eab50c041607ac1e4443fcd61768 1179 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 1047 1063 - T 15-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site THII_3347 5167eab50c041607ac1e4443fcd61768 1179 Pfam PF00027 Cyclic nucleotide-binding domain 1038 1125 3.5E-23 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_3347 5167eab50c041607ac1e4443fcd61768 1179 Pfam PF13458 Periplasmic binding protein 31 402 6.1E-36 T 15-10-2018 IPR028081 Leucine-binding protein domain THII_3347 5167eab50c041607ac1e4443fcd61768 1179 Gene3D G3DSA:2.60.120.10 990 1152 1.8E-34 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_3347 5167eab50c041607ac1e4443fcd61768 1179 Gene3D G3DSA:3.40.50.2300 52 383 3.2E-70 T 15-10-2018 THII_3347 5167eab50c041607ac1e4443fcd61768 1179 Pfam PF00924 Mechanosensitive ion channel 788 985 3.2E-31 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 THII_0912 772ce3a3fb35c8fd2f5cf73e3f8abc61 71 SUPERFAMILY SSF52980 8 71 1.72E-7 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0912 772ce3a3fb35c8fd2f5cf73e3f8abc61 71 Pfam PF05685 Putative restriction endonuclease 9 67 5.6E-9 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 Pfam PF17191 RecG wedge domain 10 166 1.3E-17 T 15-10-2018 IPR033454 RecG, wedge domain THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 SMART SM00487 259 453 8.3E-29 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 22 655 7.6E-225 T 15-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 SUPERFAMILY SSF50249 2 168 1.42E-32 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 SUPERFAMILY SSF52540 173 447 4.99E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 SUPERFAMILY SSF52540 284 646 2.08E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 Gene3D G3DSA:3.40.50.300 202 444 8.2E-85 T 15-10-2018 THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 Pfam PF00270 DEAD/DEAH box helicase 266 402 8.8E-16 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 Gene3D G3DSA:2.40.50.140 41 134 3.6E-12 T 15-10-2018 THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 Pfam PF00271 Helicase conserved C-terminal domain 473 582 1.0E-18 T 15-10-2018 IPR001650 Helicase, C-terminal THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 Gene3D G3DSA:3.40.50.300 451 624 9.0E-55 T 15-10-2018 THII_1537 beea1bd223be360c134aef2dfa65f1e2 687 SMART SM00490 499 583 1.5E-21 T 15-10-2018 IPR001650 Helicase, C-terminal THII_3162 1d96b3e41245e64917014a0e43c4992d 293 Gene3D G3DSA:3.30.470.20 106 249 2.6E-59 T 15-10-2018 THII_3162 1d96b3e41245e64917014a0e43c4992d 293 Gene3D G3DSA:3.30.200.20 4 104 6.3E-31 T 15-10-2018 THII_3162 1d96b3e41245e64917014a0e43c4992d 293 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 293 24.625 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 THII_3162 1d96b3e41245e64917014a0e43c4992d 293 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 16 292 6.7E-78 T 15-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 THII_3162 1d96b3e41245e64917014a0e43c4992d 293 Pfam PF01259 SAICAR synthetase 16 268 7.2E-98 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 THII_3162 1d96b3e41245e64917014a0e43c4992d 293 SUPERFAMILY SSF56104 6 291 1.37E-98 T 15-10-2018 THII_3162 1d96b3e41245e64917014a0e43c4992d 293 ProSitePatterns PS01058 SAICAR synthetase signature 2. 205 213 - T 15-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 Gene3D G3DSA:3.10.350.10 296 367 4.3E-12 T 15-10-2018 IPR036779 LysM domain superfamily THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 Gene3D G3DSA:3.10.350.10 369 428 1.5E-12 T 15-10-2018 IPR036779 LysM domain superfamily THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 Gene3D G3DSA:3.10.350.10 221 289 4.0E-14 T 15-10-2018 IPR036779 LysM domain superfamily THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 Gene3D G3DSA:3.10.350.10 131 195 2.1E-14 T 15-10-2018 IPR036779 LysM domain superfamily THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 Gene3D G3DSA:3.10.350.10 43 110 2.4E-15 T 15-10-2018 IPR036779 LysM domain superfamily THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 SUPERFAMILY SSF54106 312 355 5.23E-9 T 15-10-2018 THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 SUPERFAMILY SSF54106 57 101 1.09E-10 T 15-10-2018 THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 SUPERFAMILY SSF54106 143 187 1.16E-10 T 15-10-2018 THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 SUPERFAMILY SSF54106 232 276 1.15E-10 T 15-10-2018 THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 SUPERFAMILY SSF54106 382 425 2.49E-9 T 15-10-2018 THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 SMART SM00257 312 356 2.4E-9 T 15-10-2018 IPR018392 LysM domain THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 SMART SM00257 382 426 2.0E-9 T 15-10-2018 IPR018392 LysM domain THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 SMART SM00257 143 187 3.2E-11 T 15-10-2018 IPR018392 LysM domain THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 SMART SM00257 58 102 1.5E-10 T 15-10-2018 IPR018392 LysM domain THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 SMART SM00257 232 276 1.2E-11 T 15-10-2018 IPR018392 LysM domain THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 Pfam PF01476 LysM domain 59 101 1.8E-11 T 15-10-2018 IPR018392 LysM domain THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 Pfam PF01476 LysM domain 313 355 3.6E-9 T 15-10-2018 IPR018392 LysM domain THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 Pfam PF01476 LysM domain 383 425 1.9E-11 T 15-10-2018 IPR018392 LysM domain THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 Pfam PF01476 LysM domain 144 186 1.5E-13 T 15-10-2018 IPR018392 LysM domain THII_2647 560fe38ca4462aaa8dd8ab5e3a794688 428 Pfam PF01476 LysM domain 233 275 1.1E-11 T 15-10-2018 IPR018392 LysM domain THII_2682 ee8e8ea9cbc47d3c0b2d3d052b620ef0 765 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 455 478 2.4E-4 T 15-10-2018 IPR030934 Intein C-terminal splicing region THII_2682 ee8e8ea9cbc47d3c0b2d3d052b620ef0 765 SUPERFAMILY SSF51998 31 290 1.65E-69 T 15-10-2018 THII_2682 ee8e8ea9cbc47d3c0b2d3d052b620ef0 765 SUPERFAMILY SSF51998 459 752 5.8E-79 T 15-10-2018 THII_2682 ee8e8ea9cbc47d3c0b2d3d052b620ef0 765 SUPERFAMILY SSF51294 289 478 1.44E-22 T 15-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_2682 ee8e8ea9cbc47d3c0b2d3d052b620ef0 765 SMART SM00306 287 405 0.0069 T 15-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_2682 ee8e8ea9cbc47d3c0b2d3d052b620ef0 765 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 31 289 1.3E-79 T 15-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 THII_2682 ee8e8ea9cbc47d3c0b2d3d052b620ef0 765 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 470 751 9.5E-83 T 15-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 THII_2682 ee8e8ea9cbc47d3c0b2d3d052b620ef0 765 Gene3D G3DSA:3.20.70.20 44 383 4.4E-35 T 15-10-2018 THII_2682 ee8e8ea9cbc47d3c0b2d3d052b620ef0 765 Gene3D G3DSA:3.20.70.20 452 762 1.3E-65 T 15-10-2018 THII_0345 aab5f14e5eb295fc7a686744f29af726 195 Pfam PF05685 Putative restriction endonuclease 31 190 9.1E-29 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0345 aab5f14e5eb295fc7a686744f29af726 195 SUPERFAMILY SSF52980 19 194 1.45E-36 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0345 aab5f14e5eb295fc7a686744f29af726 195 Gene3D G3DSA:3.90.1570.10 11 194 2.3E-42 T 15-10-2018 THII_0643 232acb9fb07a164f599da83ffdba74ef 664 Gene3D G3DSA:3.10.170.10 206 369 2.1E-40 T 15-10-2018 THII_0643 232acb9fb07a164f599da83ffdba74ef 664 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 368 513 9.9E-29 T 15-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 THII_0643 232acb9fb07a164f599da83ffdba74ef 664 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 54 100 3.3E-10 T 15-10-2018 IPR011096 FTP domain THII_0643 232acb9fb07a164f599da83ffdba74ef 664 SUPERFAMILY SSF55486 228 517 5.31E-59 T 15-10-2018 THII_0643 232acb9fb07a164f599da83ffdba74ef 664 Gene3D G3DSA:1.10.390.10 370 524 2.4E-40 T 15-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily THII_0643 232acb9fb07a164f599da83ffdba74ef 664 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 228 365 2.3E-21 T 15-10-2018 IPR013856 Peptidase M4 domain GO:0004222 THII_0643 232acb9fb07a164f599da83ffdba74ef 664 Gene3D G3DSA:3.10.450.490 20 110 1.4E-8 T 15-10-2018 THII_0643 232acb9fb07a164f599da83ffdba74ef 664 Gene3D G3DSA:3.10.450.40 112 203 3.6E-16 T 15-10-2018 THII_0643 232acb9fb07a164f599da83ffdba74ef 664 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 444 460 2.2E-18 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 THII_0643 232acb9fb07a164f599da83ffdba74ef 664 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 322 342 2.2E-18 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 THII_0643 232acb9fb07a164f599da83ffdba74ef 664 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 377 388 2.2E-18 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 THII_0643 232acb9fb07a164f599da83ffdba74ef 664 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 356 372 2.2E-18 T 15-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 THII_3745 6da18a980a5aadd64f50ef6e5104fc37 322 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 5.2E-13 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 THII_3745 6da18a980a5aadd64f50ef6e5104fc37 322 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 5.2E-13 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 THII_3745 6da18a980a5aadd64f50ef6e5104fc37 322 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 5.2E-13 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 THII_3745 6da18a980a5aadd64f50ef6e5104fc37 322 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 312 1.9E-107 T 15-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 THII_3745 6da18a980a5aadd64f50ef6e5104fc37 322 PIRSF PIRSF006431 1 316 3.0E-120 T 15-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 THII_3745 6da18a980a5aadd64f50ef6e5104fc37 322 Gene3D G3DSA:3.40.50.1820 1 313 3.5E-94 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_3745 6da18a980a5aadd64f50ef6e5104fc37 322 SUPERFAMILY SSF53474 1 298 2.28E-56 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_3745 6da18a980a5aadd64f50ef6e5104fc37 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 2.9E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_3745 6da18a980a5aadd64f50ef6e5104fc37 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 2.9E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_3745 6da18a980a5aadd64f50ef6e5104fc37 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 2.9E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_3745 6da18a980a5aadd64f50ef6e5104fc37 322 Pfam PF00561 alpha/beta hydrolase fold 36 298 1.5E-30 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_0416 4ba033e1da0cd34dbf82429176beebfe 333 PIRSF PIRSF004911 2 333 9.0E-109 T 15-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase THII_0416 4ba033e1da0cd34dbf82429176beebfe 333 SUPERFAMILY SSF102114 106 320 4.32E-22 T 15-10-2018 THII_0416 4ba033e1da0cd34dbf82429176beebfe 333 Pfam PF13353 4Fe-4S single cluster domain 113 178 3.2E-5 T 15-10-2018 THII_0416 4ba033e1da0cd34dbf82429176beebfe 333 Gene3D G3DSA:3.20.20.70 51 331 1.4E-81 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0416 4ba033e1da0cd34dbf82429176beebfe 333 TIGRFAM TIGR00238 TIGR00238: KamA family protein 14 325 3.2E-96 T 15-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase THII_0416 4ba033e1da0cd34dbf82429176beebfe 333 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 332 2.4E-131 T 15-10-2018 IPR022462 Lysine-2,3-aminomutase-like THII_2711 e00e018eec07f44171c6e48b01127117 243 SUPERFAMILY SSF51064 178 231 4.05E-17 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 THII_2711 e00e018eec07f44171c6e48b01127117 243 PRINTS PR00773 GrpE protein signature 100 116 1.6E-21 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 THII_2711 e00e018eec07f44171c6e48b01127117 243 PRINTS PR00773 GrpE protein signature 183 198 1.6E-21 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 THII_2711 e00e018eec07f44171c6e48b01127117 243 PRINTS PR00773 GrpE protein signature 128 143 1.6E-21 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 THII_2711 e00e018eec07f44171c6e48b01127117 243 PRINTS PR00773 GrpE protein signature 210 229 1.6E-21 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 THII_2711 e00e018eec07f44171c6e48b01127117 243 SUPERFAMILY SSF58014 77 174 2.09E-21 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 THII_2711 e00e018eec07f44171c6e48b01127117 243 Pfam PF01025 GrpE 68 231 7.5E-45 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 THII_2711 e00e018eec07f44171c6e48b01127117 243 Gene3D G3DSA:3.90.20.20 49 174 5.0E-24 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 THII_2711 e00e018eec07f44171c6e48b01127117 243 Hamap MF_01151 Protein GrpE [grpE]. 31 231 18.452 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 THII_2711 e00e018eec07f44171c6e48b01127117 243 ProSitePatterns PS01071 grpE protein signature. 186 229 - T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 THII_2711 e00e018eec07f44171c6e48b01127117 243 Gene3D G3DSA:2.30.22.10 176 231 4.6E-20 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 THII_1285 312ad22201a75e3d53794e5afb350f36 674 Gene3D G3DSA:1.10.287.950 363 670 2.4E-60 T 15-10-2018 THII_1285 312ad22201a75e3d53794e5afb350f36 674 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 440 624 2.2E-42 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_1285 312ad22201a75e3d53794e5afb350f36 674 SMART SM00283 396 657 2.4E-82 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_1285 312ad22201a75e3d53794e5afb350f36 674 SUPERFAMILY SSF58104 357 658 1.48E-65 T 15-10-2018 THII_1445 d46409c328d7b1e086bef3983823a2c0 483 Pfam PF00171 Aldehyde dehydrogenase family 19 477 5.2E-172 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 THII_1445 d46409c328d7b1e086bef3983823a2c0 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 5.4E-219 T 15-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 THII_1445 d46409c328d7b1e086bef3983823a2c0 483 SUPERFAMILY SSF53720 5 481 8.12E-173 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 THII_1445 d46409c328d7b1e086bef3983823a2c0 483 Gene3D G3DSA:3.40.605.10 20 472 6.2E-185 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 THII_1445 d46409c328d7b1e086bef3983823a2c0 483 Gene3D G3DSA:3.40.309.10 261 450 6.2E-185 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 THII_1445 d46409c328d7b1e086bef3983823a2c0 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 THII_1445 d46409c328d7b1e086bef3983823a2c0 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 THII_0721 bacca277dd8645ad18cd3f4f19fa4ddb 456 Pfam PF09913 Predicted membrane protein (DUF2142) 16 410 9.6E-78 T 15-10-2018 IPR018674 Protein of unknown function DUF2142, membrane THII_2385 38ab04240d8c55319cede97e74b3acd8 131 SUPERFAMILY SSF88723 1 121 1.23E-17 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2385 38ab04240d8c55319cede97e74b3acd8 131 Pfam PF01850 PIN domain 4 119 2.3E-12 T 15-10-2018 IPR002716 PIN domain THII_2385 38ab04240d8c55319cede97e74b3acd8 131 Gene3D G3DSA:3.40.50.1010 1 124 2.9E-8 T 15-10-2018 THII_1407 7dac0e62b1c89251cc69042d45d92450 552 Pfam PF07510 Protein of unknown function (DUF1524) 405 541 2.4E-29 T 15-10-2018 IPR011089 Domain of unknown function DUF1524 THII_1407 7dac0e62b1c89251cc69042d45d92450 552 Pfam PF03235 Protein of unknown function DUF262 8 219 1.7E-40 T 15-10-2018 IPR004919 Domain of unknown function DUF262 THII_0951 85c2702d3e739cf5ac816777c4ed19bf 129 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 5 109 30.462 T 15-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 THII_0951 85c2702d3e739cf5ac816777c4ed19bf 129 Gene3D G3DSA:3.10.20.400 2 96 2.4E-37 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 THII_0951 85c2702d3e739cf5ac816777c4ed19bf 129 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 108 2.0E-21 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 THII_0951 85c2702d3e739cf5ac816777c4ed19bf 129 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 105 6.9E-34 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 THII_0951 85c2702d3e739cf5ac816777c4ed19bf 129 SUPERFAMILY SSF141734 2 121 1.11E-47 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 THII_0859 6b6e9872f6a40a52760dacf4c70c88f3 218 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0859 6b6e9872f6a40a52760dacf4c70c88f3 218 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 2.6E-4 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0859 6b6e9872f6a40a52760dacf4c70c88f3 218 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 3.0E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 SUPERFAMILY SSF52058 74 233 1.02E-16 T 15-10-2018 THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 SUPERFAMILY SSF52058 207 490 1.02E-41 T 15-10-2018 THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 SMART SM00364 265 285 46.0 T 15-10-2018 THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 SMART SM00364 164 184 50.0 T 15-10-2018 THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 SMART SM00364 358 378 2.3 T 15-10-2018 THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 SMART SM00364 219 239 210.0 T 15-10-2018 THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 SMART SM00364 404 424 440.0 T 15-10-2018 THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 Pfam PF12799 Leucine Rich repeats (2 copies) 267 305 3.1E-6 T 15-10-2018 IPR025875 Leucine rich repeat 4 THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 Gene3D G3DSA:3.80.10.10 161 284 9.6E-17 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 Gene3D G3DSA:3.80.10.10 48 160 3.5E-17 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 PRINTS PR00019 Leucine-rich repeat signature 268 281 8.3E-5 T 15-10-2018 THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 PRINTS PR00019 Leucine-rich repeat signature 472 485 8.3E-5 T 15-10-2018 THII_1682 4a8e5ec2b2e1639492d29ae003bdf6fd 508 Gene3D G3DSA:3.80.10.10 285 498 6.3E-36 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_1248 82f45bc9f01f65ace19a39bd20224814 160 Pfam PF11143 Protein of unknown function (DUF2919) 4 154 2.8E-14 T 15-10-2018 IPR021318 Protein of unknown function DUF2919 THII_2112 77025e1da0808ec3c4d3d6a609028afb 138 Gene3D G3DSA:3.30.420.270 65 133 1.4E-11 T 15-10-2018 THII_2112 77025e1da0808ec3c4d3d6a609028afb 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 137 3.8E-34 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 THII_3020 3910a8fd3a2da13f88704b53b72a5d7a 448 Pfam PF00989 PAS fold 96 212 1.8E-7 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_3020 3910a8fd3a2da13f88704b53b72a5d7a 448 SUPERFAMILY SSF55073 272 432 2.67E-45 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3020 3910a8fd3a2da13f88704b53b72a5d7a 448 SUPERFAMILY SSF55785 88 213 5.23E-10 T 15-10-2018 IPR035965 PAS domain superfamily THII_3020 3910a8fd3a2da13f88704b53b72a5d7a 448 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 430 8.2E-49 T 15-10-2018 IPR000160 GGDEF domain THII_3020 3910a8fd3a2da13f88704b53b72a5d7a 448 SMART SM00267 256 434 3.5E-63 T 15-10-2018 IPR000160 GGDEF domain THII_3020 3910a8fd3a2da13f88704b53b72a5d7a 448 Gene3D G3DSA:3.30.450.20 82 221 5.2E-15 T 15-10-2018 THII_3020 3910a8fd3a2da13f88704b53b72a5d7a 448 Gene3D G3DSA:3.30.70.270 253 433 1.4E-55 T 15-10-2018 THII_3020 3910a8fd3a2da13f88704b53b72a5d7a 448 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 263 433 2.0E-47 T 15-10-2018 IPR000160 GGDEF domain THII_2820 e29f06473e25059097d2708ca439d0a0 414 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 65 219 3.6E-11 T 15-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like THII_3610 8cfbadd072b54425dda0ed99fb767c2f 270 Pfam PF00809 Pterin binding enzyme 8 248 3.6E-87 T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3610 8cfbadd072b54425dda0ed99fb767c2f 270 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3610 8cfbadd072b54425dda0ed99fb767c2f 270 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 6 262 2.4E-101 T 15-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 THII_3610 8cfbadd072b54425dda0ed99fb767c2f 270 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3610 8cfbadd072b54425dda0ed99fb767c2f 270 SUPERFAMILY SSF51717 3 265 4.32E-101 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3610 8cfbadd072b54425dda0ed99fb767c2f 270 Gene3D G3DSA:3.20.20.20 1 267 2.1E-108 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_3194 c481353d040f968fa25031459a138e98 270 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 69 239 1.9E-33 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 THII_3194 c481353d040f968fa25031459a138e98 270 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 64 241 1.5E-25 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 THII_1390 7a7423bcc603a15dda4b672f9ae429c2 603 PIRSF PIRSF002741 9 598 2.0E-106 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 THII_1390 7a7423bcc603a15dda4b672f9ae429c2 603 Gene3D G3DSA:3.40.190.10 32 596 2.2E-236 T 15-10-2018 THII_1390 7a7423bcc603a15dda4b672f9ae429c2 603 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 97 509 6.6E-76 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain THII_1390 7a7423bcc603a15dda4b672f9ae429c2 603 SUPERFAMILY SSF53850 48 598 5.43E-116 T 15-10-2018 THII_1390 7a7423bcc603a15dda4b672f9ae429c2 603 Gene3D G3DSA:3.10.105.10 310 572 2.2E-236 T 15-10-2018 THII_1258 cf043ee029bcd9ab27548c2738ca2f47 178 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 11 163 1.2E-52 T 15-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 THII_1258 cf043ee029bcd9ab27548c2738ca2f47 178 SUPERFAMILY SSF56784 11 167 2.33E-42 T 15-10-2018 IPR036412 HAD-like superfamily THII_1258 cf043ee029bcd9ab27548c2738ca2f47 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 12 128 3.0E-16 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 THII_1258 cf043ee029bcd9ab27548c2738ca2f47 178 Pfam PF08282 haloacid dehalogenase-like hydrolase 80 149 1.6E-13 T 15-10-2018 THII_1258 cf043ee029bcd9ab27548c2738ca2f47 178 Gene3D G3DSA:3.40.50.1000 1 172 3.6E-55 T 15-10-2018 IPR023214 HAD superfamily THII_1258 cf043ee029bcd9ab27548c2738ca2f47 178 PIRSF PIRSF006118 1 173 2.6E-69 T 15-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 THII_2357 ed844afa80f3c639b3483246b717e869 1787 Pfam PF04773 FecR protein 71 172 3.5E-6 T 15-10-2018 IPR006860 FecR protein THII_2357 ed844afa80f3c639b3483246b717e869 1787 Gene3D G3DSA:2.150.10.10 1575 1721 4.7E-13 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal THII_2357 ed844afa80f3c639b3483246b717e869 1787 Gene3D G3DSA:2.60.40.10 791 880 8.1E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2357 ed844afa80f3c639b3483246b717e869 1787 SUPERFAMILY SSF49313 795 879 9.94E-5 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_2357 ed844afa80f3c639b3483246b717e869 1787 SUPERFAMILY SSF51120 1591 1684 4.71E-15 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal THII_3542 39d2ad92f6c0f53fcd0e44d355bfaae1 319 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 283 36.28 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 THII_3542 39d2ad92f6c0f53fcd0e44d355bfaae1 319 Pfam PF02401 LytB protein 3 279 8.8E-88 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 THII_3542 39d2ad92f6c0f53fcd0e44d355bfaae1 319 Gene3D G3DSA:3.40.50.11270 12 96 5.1E-106 T 15-10-2018 THII_3542 39d2ad92f6c0f53fcd0e44d355bfaae1 319 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 281 1.5E-96 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 THII_3542 39d2ad92f6c0f53fcd0e44d355bfaae1 319 Gene3D G3DSA:3.40.1010.20 6 279 5.1E-106 T 15-10-2018 THII_3542 39d2ad92f6c0f53fcd0e44d355bfaae1 319 Gene3D G3DSA:3.40.1010.20 97 193 5.1E-106 T 15-10-2018 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 Pfam PF00117 Glutamine amidotransferase class-I 4 191 7.7E-54 T 15-10-2018 IPR017926 Glutamine amidotransferase THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 3.2E-13 T 15-10-2018 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 3.2E-13 T 15-10-2018 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 3.2E-13 T 15-10-2018 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.6E-37 T 15-10-2018 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.6E-37 T 15-10-2018 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.6E-37 T 15-10-2018 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.6E-37 T 15-10-2018 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 PRINTS PR00097 Anthranilate synthase component II signature 169 182 5.6E-37 T 15-10-2018 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.6E-37 T 15-10-2018 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 SUPERFAMILY SSF52317 1 193 3.06E-54 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 Gene3D G3DSA:3.40.50.880 1 195 1.2E-61 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 5.7E-81 T 15-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 4.7E-5 T 15-10-2018 THII_1977 f73fbaa06f6dd7a77aa127db141712e3 205 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 4.7E-5 T 15-10-2018 THII_0760 555eb1aa4e9493ea06f194070389c8dd 478 SUPERFAMILY SSF53448 4 244 1.41E-45 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0760 555eb1aa4e9493ea06f194070389c8dd 478 Pfam PF00483 Nucleotidyl transferase 5 222 8.7E-20 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 THII_0760 555eb1aa4e9493ea06f194070389c8dd 478 Gene3D G3DSA:3.90.550.10 245 477 2.8E-38 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0760 555eb1aa4e9493ea06f194070389c8dd 478 SUPERFAMILY SSF53448 235 473 1.15E-29 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0760 555eb1aa4e9493ea06f194070389c8dd 478 Gene3D G3DSA:3.90.550.10 4 244 9.5E-47 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0760 555eb1aa4e9493ea06f194070389c8dd 478 Pfam PF00535 Glycosyl transferase family 2 251 359 1.1E-18 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_2536 fb83384f2b71e024c9f04837d120188c 273 Pfam PF03799 Cell division protein FtsQ 120 260 1.3E-15 T 15-10-2018 IPR005548 Cell division protein FtsQ/DivIB THII_2536 fb83384f2b71e024c9f04837d120188c 273 Pfam PF08478 POTRA domain, FtsQ-type 39 107 8.8E-15 T 15-10-2018 IPR013685 POTRA domain, FtsQ-type THII_2536 fb83384f2b71e024c9f04837d120188c 273 Gene3D G3DSA:3.40.50.11690 109 270 1.0E-29 T 15-10-2018 THII_2536 fb83384f2b71e024c9f04837d120188c 273 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 8 268 16.981 T 15-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 THII_2536 fb83384f2b71e024c9f04837d120188c 273 Gene3D G3DSA:3.10.20.310 37 106 6.6E-16 T 15-10-2018 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 369 6.4E-110 T 15-10-2018 IPR028053 Membrane insertase YidC, N-terminal THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 Pfam PF14849 YidC periplasmic domain 84 359 3.4E-83 T 15-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 Gene3D G3DSA:2.70.98.90 81 350 2.2E-90 T 15-10-2018 IPR038221 YidC, periplasmic domain superfamily THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 PRINTS PR01900 YidC translocation/secretion protein signature 485 500 9.6E-24 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 PRINTS PR01900 YidC translocation/secretion protein signature 504 528 9.6E-24 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 PRINTS PR01900 YidC translocation/secretion protein signature 356 372 9.6E-24 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 551 24.023 T 15-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 PRINTS PR00701 60kDa inner membrane protein signature 90 111 9.9E-78 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 PRINTS PR00701 60kDa inner membrane protein signature 432 455 9.9E-78 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 PRINTS PR00701 60kDa inner membrane protein signature 479 501 9.9E-78 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 PRINTS PR00701 60kDa inner membrane protein signature 267 282 9.9E-78 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 PRINTS PR00701 60kDa inner membrane protein signature 179 199 9.9E-78 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 PRINTS PR00701 60kDa inner membrane protein signature 2 23 9.9E-78 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 PRINTS PR00701 60kDa inner membrane protein signature 341 361 9.9E-78 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 PRINTS PR00701 60kDa inner membrane protein signature 515 538 9.9E-78 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 370 549 2.5E-68 T 15-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0727 dc0fc4daa5838f264ad7d5a2ce8e6c70 555 Pfam PF02096 60Kd inner membrane protein 371 549 3.9E-59 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 THII_0050 93952e75379a342d39fba129b9062a9d 701 Pfam PF00990 Diguanylate cyclase, GGDEF domain 268 435 2.2E-35 T 15-10-2018 IPR000160 GGDEF domain THII_0050 93952e75379a342d39fba129b9062a9d 701 Pfam PF00072 Response regulator receiver domain 8 119 9.7E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0050 93952e75379a342d39fba129b9062a9d 701 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 438 2.6E-35 T 15-10-2018 IPR000160 GGDEF domain THII_0050 93952e75379a342d39fba129b9062a9d 701 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 264 2.5E-13 T 15-10-2018 IPR000014 PAS domain THII_0050 93952e75379a342d39fba129b9062a9d 701 Gene3D G3DSA:3.30.70.270 257 439 6.4E-46 T 15-10-2018 THII_0050 93952e75379a342d39fba129b9062a9d 701 Pfam PF00563 EAL domain 466 696 1.3E-49 T 15-10-2018 IPR001633 EAL domain THII_0050 93952e75379a342d39fba129b9062a9d 701 SUPERFAMILY SSF55073 273 441 2.59E-39 T 15-10-2018 IPR029787 Nucleotide cyclase THII_0050 93952e75379a342d39fba129b9062a9d 701 Gene3D G3DSA:3.30.450.20 146 255 1.1E-23 T 15-10-2018 THII_0050 93952e75379a342d39fba129b9062a9d 701 SMART SM00448 6 119 2.6E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0050 93952e75379a342d39fba129b9062a9d 701 SUPERFAMILY SSF141868 465 699 1.57E-55 T 15-10-2018 IPR035919 EAL domain superfamily THII_0050 93952e75379a342d39fba129b9062a9d 701 SMART SM00267 257 439 8.5E-49 T 15-10-2018 IPR000160 GGDEF domain THII_0050 93952e75379a342d39fba129b9062a9d 701 SMART SM00091 137 206 0.0013 T 15-10-2018 IPR000014 PAS domain THII_0050 93952e75379a342d39fba129b9062a9d 701 Gene3D G3DSA:3.20.20.450 440 700 5.2E-64 T 15-10-2018 IPR035919 EAL domain superfamily THII_0050 93952e75379a342d39fba129b9062a9d 701 SMART SM00052 450 701 4.8E-40 T 15-10-2018 IPR001633 EAL domain THII_0050 93952e75379a342d39fba129b9062a9d 701 SUPERFAMILY SSF55785 122 255 2.09E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_0050 93952e75379a342d39fba129b9062a9d 701 Pfam PF08448 PAS fold 145 258 2.0E-11 T 15-10-2018 IPR013656 PAS fold-4 THII_0050 93952e75379a342d39fba129b9062a9d 701 Gene3D G3DSA:3.40.50.2300 2 144 5.3E-41 T 15-10-2018 THII_0050 93952e75379a342d39fba129b9062a9d 701 SUPERFAMILY SSF52172 7 137 4.27E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_0006 cfb668de5641d145a829090ecf1e79a2 93 Pfam PF03683 Uncharacterised protein family (UPF0175) 5 55 3.6E-10 T 15-10-2018 IPR005368 Uncharacterised protein family UPF0175 THII_2611 856ae3a51220e8fecb756a552d9ad881 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 15-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 THII_2611 856ae3a51220e8fecb756a552d9ad881 217 Gene3D G3DSA:3.40.50.300 1 216 8.7E-76 T 15-10-2018 THII_2611 856ae3a51220e8fecb756a552d9ad881 217 PRINTS PR00094 Adenylate kinase signature 32 46 7.8E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 THII_2611 856ae3a51220e8fecb756a552d9ad881 217 PRINTS PR00094 Adenylate kinase signature 81 97 7.8E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 THII_2611 856ae3a51220e8fecb756a552d9ad881 217 PRINTS PR00094 Adenylate kinase signature 156 171 7.8E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 THII_2611 856ae3a51220e8fecb756a552d9ad881 217 PRINTS PR00094 Adenylate kinase signature 173 187 7.8E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 THII_2611 856ae3a51220e8fecb756a552d9ad881 217 PRINTS PR00094 Adenylate kinase signature 4 17 7.8E-35 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 THII_2611 856ae3a51220e8fecb756a552d9ad881 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 189 1.9E-73 T 15-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 THII_2611 856ae3a51220e8fecb756a552d9ad881 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.3E-17 T 15-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 THII_2611 856ae3a51220e8fecb756a552d9ad881 217 SUPERFAMILY SSF52540 1 184 1.44E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2611 856ae3a51220e8fecb756a552d9ad881 217 Pfam PF00406 Adenylate kinase 5 185 1.3E-57 T 15-10-2018 THII_2611 856ae3a51220e8fecb756a552d9ad881 217 Hamap MF_00235 Adenylate kinase [adk]. 1 217 52.371 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 THII_1878 02d2e9d1baa47281d1b46219dda51a05 596 Pfam PF01103 Surface antigen 386 583 3.5E-28 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 THII_1878 02d2e9d1baa47281d1b46219dda51a05 596 Gene3D G3DSA:3.10.20.310 203 280 6.8E-23 T 15-10-2018 THII_1878 02d2e9d1baa47281d1b46219dda51a05 596 Gene3D G3DSA:3.10.20.310 30 110 2.1E-12 T 15-10-2018 THII_1878 02d2e9d1baa47281d1b46219dda51a05 596 Pfam PF07244 Surface antigen variable number repeat 203 275 2.3E-8 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 THII_1878 02d2e9d1baa47281d1b46219dda51a05 596 Pfam PF07244 Surface antigen variable number repeat 123 196 9.3E-5 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 THII_1878 02d2e9d1baa47281d1b46219dda51a05 596 Gene3D G3DSA:2.40.160.50 281 596 2.3E-93 T 15-10-2018 THII_1878 02d2e9d1baa47281d1b46219dda51a05 596 Gene3D G3DSA:3.10.20.310 115 202 9.5E-20 T 15-10-2018 THII_1878 02d2e9d1baa47281d1b46219dda51a05 596 Pfam PF17243 POTRA domain TamA domain 1 33 112 2.7E-22 T 15-10-2018 IPR035243 TamA, POTRA domain 1 THII_1733 16715b7203c7c3bdfa72dbe9fdcba9d9 163 SUPERFAMILY SSF47781 27 92 3.89E-24 T 15-10-2018 IPR010994 RuvA domain 2-like THII_1733 16715b7203c7c3bdfa72dbe9fdcba9d9 163 Pfam PF12836 Helix-hairpin-helix motif 29 88 1.3E-22 T 15-10-2018 THII_1733 16715b7203c7c3bdfa72dbe9fdcba9d9 163 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 26 89 1.5E-20 T 15-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain THII_1733 16715b7203c7c3bdfa72dbe9fdcba9d9 163 Gene3D G3DSA:1.10.150.320 23 89 1.3E-18 T 15-10-2018 THII_3135 fef7ea24933d87ea14633cf2a52034d3 115 Pfam PF13453 Transcription factor zinc-finger 2 43 2.4E-21 T 15-10-2018 IPR027392 Transcription factor zinc-finger THII_0593 6d0f1be30227b3a9d5272f342f52b574 282 SUPERFAMILY SSF53335 8 271 4.04E-80 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0593 6d0f1be30227b3a9d5272f342f52b574 282 Gene3D G3DSA:3.40.50.150 1 282 1.9E-101 T 15-10-2018 THII_0593 6d0f1be30227b3a9d5272f342f52b574 282 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 267 38.419 T 15-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 THII_0593 6d0f1be30227b3a9d5272f342f52b574 282 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 280 3.1E-86 T 15-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 Pfam PF13424 Tetratricopeptide repeat 67 132 2.7E-8 T 15-10-2018 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 SUPERFAMILY SSF103642 1 23 8.01E-7 T 15-10-2018 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 Gene3D G3DSA:3.40.50.2000 394 567 3.8E-40 T 15-10-2018 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 Gene3D G3DSA:1.25.40.10 36 153 4.8E-27 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 SMART SM00028 67 100 1.7E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 SMART SM00028 33 66 58.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 SMART SM00028 101 134 8.4E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 SUPERFAMILY SSF53756 235 564 1.57E-10 T 15-10-2018 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 Pfam PF02810 SEC-C motif 5 23 4.0E-8 T 15-10-2018 IPR004027 SEC-C motif THII_0041 fcc52f2955372a5b396caf44719a7c66 589 Gene3D G3DSA:3.40.50.11380 234 393 6.6E-42 T 15-10-2018 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 SUPERFAMILY SSF48452 38 144 1.32E-23 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 Pfam PF13844 Glycosyl transferase family 41 234 376 1.4E-7 T 15-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 THII_0041 fcc52f2955372a5b396caf44719a7c66 589 Pfam PF13844 Glycosyl transferase family 41 393 582 2.4E-12 T 15-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 THII_0433 e83ad9690144623ef6b4853c9b5496fc 129 PIRSF PIRSF000178 1 126 1.5E-39 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0433 e83ad9690144623ef6b4853c9b5496fc 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 120 4.3E-28 T 15-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0433 e83ad9690144623ef6b4853c9b5496fc 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 7 31 - T 15-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0433 e83ad9690144623ef6b4853c9b5496fc 129 SUPERFAMILY SSF81343 4 123 1.07E-33 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0433 e83ad9690144623ef6b4853c9b5496fc 129 Gene3D G3DSA:1.20.1300.10 1 126 3.6E-37 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0433 e83ad9690144623ef6b4853c9b5496fc 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 123 4.7E-35 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0433 e83ad9690144623ef6b4853c9b5496fc 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 82 95 - T 15-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_1592 e65bf7283fccb5c1d4a25083596bbe98 554 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 4 550 52.279 T 15-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 THII_1592 e65bf7283fccb5c1d4a25083596bbe98 554 Pfam PF03109 ABC1 family 114 230 8.7E-36 T 15-10-2018 IPR004147 UbiB domain THII_1592 e65bf7283fccb5c1d4a25083596bbe98 554 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 445 4.9E-173 T 15-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 THII_1592 e65bf7283fccb5c1d4a25083596bbe98 554 SUPERFAMILY SSF56112 95 437 2.63E-48 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 ProSitePatterns PS00018 EF-hand calcium-binding domain. 76 88 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 SMART SM00054 72 95 48.0 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 SMART SM00054 43 71 1.7 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 SMART SM00054 136 164 3.4 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 SUPERFAMILY SSF47473 44 185 2.61E-20 T 15-10-2018 IPR011992 EF-hand domain pair THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 Pfam PF13833 EF-hand domain pair 71 91 0.018 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 ProSitePatterns PS00018 EF-hand calcium-binding domain. 168 180 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 Pfam PF13202 EF hand 47 66 0.0047 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 Pfam PF13202 EF hand 140 158 3.5E-4 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 Pfam PF13202 EF hand 163 183 0.0011 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 Gene3D G3DSA:1.10.238.10 135 186 2.5E-11 T 15-10-2018 THII_1894 2fcf2f86dd924ecc6f7401645ade6913 188 Gene3D G3DSA:1.10.238.10 41 97 1.8E-9 T 15-10-2018 THII_2547 ffd6ff1fa2ed4a47180c814e316c7f2c 348 Gene3D G3DSA:3.40.33.10 14 178 1.6E-17 T 15-10-2018 IPR035940 CAP superfamily THII_2547 ffd6ff1fa2ed4a47180c814e316c7f2c 348 SUPERFAMILY SSF55797 46 146 3.14E-5 T 15-10-2018 IPR035940 CAP superfamily THII_2547 ffd6ff1fa2ed4a47180c814e316c7f2c 348 Pfam PF00188 Cysteine-rich secretory protein family 51 171 1.6E-6 T 15-10-2018 IPR014044 CAP domain THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 SUPERFAMILY SSF63829 444 636 2.75E-7 T 15-10-2018 THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Gene3D G3DSA:3.40.50.1460 831 937 6.5E-8 T 15-10-2018 THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Gene3D G3DSA:2.130.10.10 77 178 6.6E-11 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Gene3D G3DSA:2.130.10.10 319 503 5.3E-34 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Gene3D G3DSA:2.130.10.10 640 805 2.7E-18 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Gene3D G3DSA:2.130.10.10 181 318 2.7E-25 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 SUPERFAMILY SSF63829 102 370 9.92E-7 T 15-10-2018 THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Gene3D G3DSA:2.60.40.10 1010 1123 3.9E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF01650 Peptidase C13 family 847 936 2.9E-10 T 15-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF07494 Two component regulator propeller 612 634 0.0077 T 15-10-2018 IPR011110 Two component regulator propeller THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF07494 Two component regulator propeller 700 721 0.0013 T 15-10-2018 IPR011110 Two component regulator propeller THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF07494 Two component regulator propeller 293 315 4.1E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF07494 Two component regulator propeller 346 369 0.002 T 15-10-2018 IPR011110 Two component regulator propeller THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF07494 Two component regulator propeller 389 412 2.2E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF07494 Two component regulator propeller 249 270 9.5E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF07494 Two component regulator propeller 476 499 0.01 T 15-10-2018 IPR011110 Two component regulator propeller THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF07494 Two component regulator propeller 151 171 0.015 T 15-10-2018 IPR011110 Two component regulator propeller THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF07494 Two component regulator propeller 655 677 5.0E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF07494 Two component regulator propeller 207 228 0.001 T 15-10-2018 IPR011110 Two component regulator propeller THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Pfam PF07494 Two component regulator propeller 432 455 6.5E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 SUPERFAMILY SSF63829 100 172 1.77E-6 T 15-10-2018 THII_1573 a799422a2fb91e94fbf31d6a23c3c306 1245 Gene3D G3DSA:2.130.10.10 505 639 6.4E-21 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0327 5476743656d0664cf8d3325cc45eab8d 325 SUPERFAMILY SSF51261 173 286 2.56E-27 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_0327 5476743656d0664cf8d3325cc45eab8d 325 Pfam PF01551 Peptidase family M23 188 282 3.1E-20 T 15-10-2018 IPR016047 Peptidase M23 THII_0327 5476743656d0664cf8d3325cc45eab8d 325 Gene3D G3DSA:2.70.70.10 175 295 5.8E-27 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_1331 c438b9eac297798fb7b4b6c7fe4ea1b5 237 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 214 7.7E-66 T 15-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1331 c438b9eac297798fb7b4b6c7fe4ea1b5 237 SMART SM00479 2 175 2.1E-45 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_1331 c438b9eac297798fb7b4b6c7fe4ea1b5 237 SUPERFAMILY SSF53098 1 175 4.11E-55 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_1331 c438b9eac297798fb7b4b6c7fe4ea1b5 237 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 232 1.7E-94 T 15-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 THII_1331 c438b9eac297798fb7b4b6c7fe4ea1b5 237 Gene3D G3DSA:3.30.420.10 1 180 6.6E-57 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 THII_1331 c438b9eac297798fb7b4b6c7fe4ea1b5 237 Pfam PF00929 Exonuclease 4 166 1.1E-36 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_1322 75e529161d48d1e0cc0ea38e04b64033 227 SUPERFAMILY SSF53955 44 222 1.77E-19 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_1322 75e529161d48d1e0cc0ea38e04b64033 227 Gene3D G3DSA:1.10.530.10 34 226 3.0E-39 T 15-10-2018 THII_0618 e0591fb6d9941786174ae35fe1f47ad8 495 SUPERFAMILY SSF46548 69 173 6.98E-14 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_0618 e0591fb6d9941786174ae35fe1f47ad8 495 Pfam PF13183 4Fe-4S dicluster domain 74 159 7.0E-10 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0618 e0591fb6d9941786174ae35fe1f47ad8 495 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0861 399b91419a30e2f34479d075974361c1 124 SUPERFAMILY SSF141371 3 91 2.94E-7 T 15-10-2018 THII_0861 399b91419a30e2f34479d075974361c1 124 Gene3D G3DSA:2.40.10.220 3 114 1.1E-5 T 15-10-2018 THII_0861 399b91419a30e2f34479d075974361c1 124 Pfam PF07238 PilZ domain 7 95 3.3E-8 T 15-10-2018 IPR009875 PilZ domain GO:0035438 THII_0370 4641309cf7f498fa8dc467a40e7cf020 271 SUPERFAMILY SSF52980 56 263 3.22E-9 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3458 abf7c9320d2d55f9dd01c258a2564ed9 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.908 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3458 abf7c9320d2d55f9dd01c258a2564ed9 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 8.2E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3458 abf7c9320d2d55f9dd01c258a2564ed9 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 8.2E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3458 abf7c9320d2d55f9dd01c258a2564ed9 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 8.2E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3458 abf7c9320d2d55f9dd01c258a2564ed9 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 8.2E-18 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3458 abf7c9320d2d55f9dd01c258a2564ed9 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 71 1.6E-36 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3458 abf7c9320d2d55f9dd01c258a2564ed9 75 Gene3D G3DSA:4.10.640.10 1 74 5.1E-27 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3458 abf7c9320d2d55f9dd01c258a2564ed9 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 15-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3458 abf7c9320d2d55f9dd01c258a2564ed9 75 Pfam PF01084 Ribosomal protein S18 18 68 6.4E-25 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3458 abf7c9320d2d55f9dd01c258a2564ed9 75 SUPERFAMILY SSF46911 3 73 1.15E-28 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3458 abf7c9320d2d55f9dd01c258a2564ed9 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 72 8.0E-20 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2812 6732bb4fd6408c30662bd945068b27ed 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 2.9E-26 T 15-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 THII_2812 6732bb4fd6408c30662bd945068b27ed 145 SUPERFAMILY SSF55961 3 143 1.28E-30 T 15-10-2018 THII_2812 6732bb4fd6408c30662bd945068b27ed 145 Gene3D G3DSA:3.30.530.20 2 144 6.6E-39 T 15-10-2018 IPR023393 START-like domain superfamily THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 ProSitePatterns PS60002 Phosphoketolase signature 1. 154 160 - T 15-10-2018 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 SUPERFAMILY SSF52518 392 606 2.35E-17 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 SUPERFAMILY SSF52518 14 375 1.57E-58 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 414 589 3.8E-80 T 15-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 SUPERFAMILY SSF52922 612 752 2.51E-9 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 Gene3D G3DSA:3.40.50.970 4 392 1.3E-165 T 15-10-2018 THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 Pfam PF09364 XFP N-terminal domain 20 391 1.6E-157 T 15-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 ProSitePatterns PS60003 Phosphoketolase signature 2. 167 185 - T 15-10-2018 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 PIRSF PIRSF017245 4 806 0.0 T 15-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 Pfam PF09363 XFP C-terminal domain 600 805 5.5E-81 T 15-10-2018 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 Gene3D G3DSA:3.40.50.920 620 806 7.4E-71 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_3192 e88bdb28eea005ad1ab2a7eee2f5917e 806 Gene3D G3DSA:3.40.50.970 400 619 2.0E-96 T 15-10-2018 THII_2584 f8c9df1050ba4d05fe663dcb2a271574 324 Gene3D G3DSA:1.10.287.460 31 135 3.1E-33 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 THII_2584 f8c9df1050ba4d05fe663dcb2a271574 324 SUPERFAMILY SSF54534 40 239 1.85E-64 T 15-10-2018 THII_2584 f8c9df1050ba4d05fe663dcb2a271574 324 Gene3D G3DSA:3.10.50.40 136 241 2.9E-43 T 15-10-2018 THII_2584 f8c9df1050ba4d05fe663dcb2a271574 324 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 148 237 1.0E-29 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain THII_2584 f8c9df1050ba4d05fe663dcb2a271574 324 PRINTS PR01730 Macrophage infectivity potentiator signature 53 65 1.1E-8 T 15-10-2018 IPR008104 Macrophage infectivity potentiator GO:0003755|GO:0016020 THII_2584 f8c9df1050ba4d05fe663dcb2a271574 324 PRINTS PR01730 Macrophage infectivity potentiator signature 83 97 1.1E-8 T 15-10-2018 IPR008104 Macrophage infectivity potentiator GO:0003755|GO:0016020 THII_2584 f8c9df1050ba4d05fe663dcb2a271574 324 PRINTS PR01730 Macrophage infectivity potentiator signature 34 48 1.1E-8 T 15-10-2018 IPR008104 Macrophage infectivity potentiator GO:0003755|GO:0016020 THII_2584 f8c9df1050ba4d05fe663dcb2a271574 324 PRINTS PR01730 Macrophage infectivity potentiator signature 101 120 1.1E-8 T 15-10-2018 IPR008104 Macrophage infectivity potentiator GO:0003755|GO:0016020 THII_2584 f8c9df1050ba4d05fe663dcb2a271574 324 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 27 141 2.7E-33 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 THII_0285 0fa5754b4a1633634b26ecf7ee20ac2c 365 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 338 3.1E-161 T 15-10-2018 IPR016040 NAD(P)-binding domain THII_0285 0fa5754b4a1633634b26ecf7ee20ac2c 365 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 5 348 57.271 T 15-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 THII_0285 0fa5754b4a1633634b26ecf7ee20ac2c 365 Gene3D G3DSA:3.40.50.720 7 329 2.9E-171 T 15-10-2018 THII_0285 0fa5754b4a1633634b26ecf7ee20ac2c 365 SUPERFAMILY SSF51735 5 344 2.39E-86 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0285 0fa5754b4a1633634b26ecf7ee20ac2c 365 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 5 345 8.0E-185 T 15-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 THII_0285 0fa5754b4a1633634b26ecf7ee20ac2c 365 Gene3D G3DSA:3.90.25.10 195 343 2.9E-171 T 15-10-2018 THII_2965 9e8f53b43c2e1a69e549d5efe79999b1 122 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 120 4.7E-32 T 15-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein THII_2965 9e8f53b43c2e1a69e549d5efe79999b1 122 SUPERFAMILY SSF64076 1 121 1.09E-35 T 15-10-2018 IPR036748 MTH938-like superfamily THII_2965 9e8f53b43c2e1a69e549d5efe79999b1 122 Gene3D G3DSA:3.40.1230.10 1 122 1.7E-37 T 15-10-2018 IPR036748 MTH938-like superfamily THII_0467 56dd5a091fc2f20bbb12562963bc1031 240 Pfam PF05685 Putative restriction endonuclease 24 181 1.5E-24 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0467 56dd5a091fc2f20bbb12562963bc1031 240 Gene3D G3DSA:3.90.1570.10 24 150 6.6E-8 T 15-10-2018 THII_0467 56dd5a091fc2f20bbb12562963bc1031 240 SUPERFAMILY SSF52980 23 165 5.36E-19 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3002 dd1252d9d4bdea97044dda6f26328968 86 SUPERFAMILY SSF143120 1 80 4.58E-21 T 15-10-2018 IPR036165 YefM-like superfamily THII_3002 dd1252d9d4bdea97044dda6f26328968 86 Gene3D G3DSA:3.40.1620.10 1 40 7.3E-12 T 15-10-2018 THII_3002 dd1252d9d4bdea97044dda6f26328968 86 Gene3D G3DSA:1.10.1220.170 41 85 3.2E-9 T 15-10-2018 THII_3002 dd1252d9d4bdea97044dda6f26328968 86 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 70 1.8E-17 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_3002 dd1252d9d4bdea97044dda6f26328968 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 8 56 1.4E-8 T 15-10-2018 THII_1408 973df61f853320d2c77622721b620986 157 Pfam PF05685 Putative restriction endonuclease 14 137 8.6E-16 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1408 973df61f853320d2c77622721b620986 157 Gene3D G3DSA:3.90.1570.10 3 146 1.0E-19 T 15-10-2018 THII_1408 973df61f853320d2c77622721b620986 157 SUPERFAMILY SSF52980 12 134 2.36E-19 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2841 3752eb6b51d7cebdfda0c106ba5275b8 419 Gene3D G3DSA:3.40.50.720 160 311 9.7E-43 T 15-10-2018 THII_2841 3752eb6b51d7cebdfda0c106ba5275b8 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 415 3.2E-21 T 15-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 THII_2841 3752eb6b51d7cebdfda0c106ba5275b8 419 SUPERFAMILY SSF69075 315 416 4.58E-22 T 15-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 THII_2841 3752eb6b51d7cebdfda0c106ba5275b8 419 PIRSF PIRSF000445 1 419 9.1E-151 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 THII_2841 3752eb6b51d7cebdfda0c106ba5275b8 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.472 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 THII_2841 3752eb6b51d7cebdfda0c106ba5275b8 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 9.0E-50 T 15-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 THII_2841 3752eb6b51d7cebdfda0c106ba5275b8 419 SUPERFAMILY SSF69742 1 156 1.44E-47 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 THII_2841 3752eb6b51d7cebdfda0c106ba5275b8 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 8.3E-47 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase THII_2841 3752eb6b51d7cebdfda0c106ba5275b8 419 Gene3D G3DSA:3.30.460.30 1 156 1.7E-56 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 THII_2841 3752eb6b51d7cebdfda0c106ba5275b8 419 SUPERFAMILY SSF51735 161 313 4.63E-34 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2841 3752eb6b51d7cebdfda0c106ba5275b8 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 414 4.9E-136 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 690 708 9.9E-32 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 723 737 9.9E-32 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 661 679 9.9E-32 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 616 634 9.9E-32 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 226 357 1.3E-8 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 317 329 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 SUPERFAMILY SSF52540 561 841 1.74E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 Gene3D G3DSA:3.40.50.300 173 365 1.6E-60 T 15-10-2018 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 Gene3D G3DSA:1.10.8.60 780 877 6.3E-12 T 15-10-2018 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 863 0.0 T 15-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 773 2.5E-38 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 SMART SM00382 612 753 4.8E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 SMART SM00382 221 366 2.7E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 Gene3D G3DSA:3.40.50.300 367 559 2.2E-48 T 15-10-2018 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 Gene3D G3DSA:1.10.1780.10 1 160 9.4E-38 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 SUPERFAMILY SSF81923 12 132 2.22E-16 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 780 850 3.5E-13 T 15-10-2018 IPR019489 Clp ATPase, C-terminal THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 Gene3D G3DSA:3.40.50.300 565 778 5.3E-65 T 15-10-2018 THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 SUPERFAMILY SSF52540 181 510 7.29E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1016 62cf77df8d5fb43de4fa6a8b87ad0ea7 909 SMART SM01086 780 873 2.1E-10 T 15-10-2018 IPR019489 Clp ATPase, C-terminal THII_2353 230937a07bd1071a4a1152c9910e2435 645 Gene3D G3DSA:3.30.70.1230 443 645 1.7E-62 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2353 230937a07bd1071a4a1152c9910e2435 645 SUPERFAMILY SSF55073 447 644 1.18E-53 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2353 230937a07bd1071a4a1152c9910e2435 645 SMART SM01080 38 350 3.2E-38 T 15-10-2018 IPR007890 CHASE2 THII_2353 230937a07bd1071a4a1152c9910e2435 645 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 452 639 2.7E-34 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_2353 230937a07bd1071a4a1152c9910e2435 645 SMART SM00044 407 625 1.2E-18 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_2353 230937a07bd1071a4a1152c9910e2435 645 Pfam PF05226 CHASE2 domain 25 347 1.3E-46 T 15-10-2018 IPR007890 CHASE2 THII_2164 c108f4aa342ec7f3be75cd63e491e010 198 Pfam PF04060 Putative Fe-S cluster 43 75 2.5E-14 T 15-10-2018 IPR007202 4Fe-4S domain GO:0051536 THII_2164 c108f4aa342ec7f3be75cd63e491e010 198 Gene3D G3DSA:3.30.70.20 84 178 1.0E-19 T 15-10-2018 THII_2164 c108f4aa342ec7f3be75cd63e491e010 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 179 3.3E-74 T 15-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 THII_2164 c108f4aa342ec7f3be75cd63e491e010 198 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 3 167 23.905 T 15-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 THII_2164 c108f4aa342ec7f3be75cd63e491e010 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2164 c108f4aa342ec7f3be75cd63e491e010 198 Gene3D G3DSA:1.10.15.40 37 83 2.9E-8 T 15-10-2018 THII_2164 c108f4aa342ec7f3be75cd63e491e010 198 PIRSF PIRSF005784 2 186 1.6E-77 T 15-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 THII_2164 c108f4aa342ec7f3be75cd63e491e010 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 115 126 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2164 c108f4aa342ec7f3be75cd63e491e010 198 SUPERFAMILY SSF54862 37 174 1.1E-26 T 15-10-2018 THII_2164 c108f4aa342ec7f3be75cd63e491e010 198 Pfam PF14697 4Fe-4S dicluster domain 108 162 7.2E-17 T 15-10-2018 THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 SUPERFAMILY SSF103088 181 293 5.89E-22 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 Pfam PF02412 Thrombospondin type 3 repeat 142 162 6.7E-4 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 Pfam PF02412 Thrombospondin type 3 repeat 109 128 0.001 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 Pfam PF02412 Thrombospondin type 3 repeat 75 91 0.027 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 Pfam PF00691 OmpA family 189 273 5.8E-16 T 15-10-2018 IPR006665 OmpA-like domain THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 Gene3D G3DSA:3.30.1330.60 172 300 8.7E-28 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 SUPERFAMILY SSF103647 141 174 3.14E-8 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 Gene3D G3DSA:4.10.1080.10 44 140 5.6E-5 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 PRINTS PR01021 OMPA domain signature 190 212 7.3E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 PRINTS PR01021 OMPA domain signature 220 235 7.3E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 PRINTS PR01021 OMPA domain signature 235 251 7.3E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_1973 5abc47d69f3d4d17344c7cbc7b3559a9 300 SUPERFAMILY SSF103647 56 130 3.92E-10 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SUPERFAMILY SSF48452 512 719 4.93E-29 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SUPERFAMILY SSF48452 37 231 4.27E-29 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Pfam PF13424 Tetratricopeptide repeat 373 439 1.0E-10 T 15-10-2018 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Pfam PF13424 Tetratricopeptide repeat 87 153 7.4E-12 T 15-10-2018 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Pfam PF13424 Tetratricopeptide repeat 610 676 5.4E-10 T 15-10-2018 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Pfam PF13424 Tetratricopeptide repeat 764 836 1.6E-10 T 15-10-2018 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Pfam PF13176 Tetratricopeptide repeat 688 719 0.0063 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Pfam PF13374 Tetratricopeptide repeat 162 195 0.017 T 15-10-2018 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Pfam PF13374 Tetratricopeptide repeat 525 556 0.0077 T 15-10-2018 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SUPERFAMILY SSF48452 288 481 2.34E-28 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Gene3D G3DSA:1.25.40.10 373 496 1.0E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Pfam PF13181 Tetratricopeptide repeat 450 482 0.12 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Pfam PF13181 Tetratricopeptide repeat 331 360 0.018 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 645 678 0.057 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 288 321 2.6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 82 115 0.035 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 605 638 0.0067 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 202 235 0.065 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 525 558 5.5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 122 155 0.047 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 685 718 52.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 725 758 17.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 162 195 0.98 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 448 482 110.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 249 282 20.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 368 401 1.1 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 408 441 0.47 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 328 361 5.5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 565 598 0.55 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 42 75 0.06 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 765 798 0.05 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SMART SM00028 805 838 8.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 SUPERFAMILY SSF48452 703 843 2.06E-21 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Gene3D G3DSA:1.25.40.10 24 237 1.0E-41 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Gene3D G3DSA:1.25.40.10 606 724 4.3E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Gene3D G3DSA:1.25.40.10 725 855 7.3E-22 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Gene3D G3DSA:1.25.40.10 508 605 7.2E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2297 f72d19e3aa0134d0eb2312b82cf9ec3c 856 Gene3D G3DSA:1.25.40.10 238 372 6.4E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3453 847af9b7fca4609989ca95d424dd556d 462 Pfam PF14239 RRXRR protein 3 188 1.3E-65 T 15-10-2018 IPR025938 RRXRR domain THII_3453 847af9b7fca4609989ca95d424dd556d 462 Pfam PF14279 HNH endonuclease 207 251 5.6E-14 T 15-10-2018 IPR029471 HNH endonuclease 5 THII_3453 847af9b7fca4609989ca95d424dd556d 462 Gene3D G3DSA:3.30.40.60 173 301 2.4E-16 T 15-10-2018 THII_3453 847af9b7fca4609989ca95d424dd556d 462 SMART SM00507 194 245 5.5E-12 T 15-10-2018 IPR003615 HNH nuclease THII_0305 084526666560ac775a502bcad63b5b32 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.491 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0305 084526666560ac775a502bcad63b5b32 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.0E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0305 084526666560ac775a502bcad63b5b32 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.0E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0305 084526666560ac775a502bcad63b5b32 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.0E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0305 084526666560ac775a502bcad63b5b32 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.0E-40 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0305 084526666560ac775a502bcad63b5b32 137 Gene3D G3DSA:3.90.1170.10 1 137 4.2E-57 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 THII_0305 084526666560ac775a502bcad63b5b32 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.4E-49 T 15-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 THII_0305 084526666560ac775a502bcad63b5b32 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.3E-60 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0305 084526666560ac775a502bcad63b5b32 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 15-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0305 084526666560ac775a502bcad63b5b32 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 15-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0305 084526666560ac775a502bcad63b5b32 137 SUPERFAMILY SSF54686 1 134 1.44E-55 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 THII_3416 cce3003857b8f2f49b2f96ade9378829 808 Gene3D G3DSA:3.30.450.20 390 507 2.0E-29 T 15-10-2018 THII_3416 cce3003857b8f2f49b2f96ade9378829 808 Pfam PF00989 PAS fold 264 373 5.4E-13 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_3416 cce3003857b8f2f49b2f96ade9378829 808 SUPERFAMILY SSF55781 517 685 2.86E-6 T 15-10-2018 THII_3416 cce3003857b8f2f49b2f96ade9378829 808 Gene3D G3DSA:3.30.450.20 255 389 5.6E-17 T 15-10-2018 THII_3416 cce3003857b8f2f49b2f96ade9378829 808 SUPERFAMILY SSF55785 679 726 4.19E-5 T 15-10-2018 IPR035965 PAS domain superfamily THII_3416 cce3003857b8f2f49b2f96ade9378829 808 SUPERFAMILY SSF55785 244 374 1.34E-18 T 15-10-2018 IPR035965 PAS domain superfamily THII_3416 cce3003857b8f2f49b2f96ade9378829 808 SUPERFAMILY SSF55785 393 505 2.79E-27 T 15-10-2018 IPR035965 PAS domain superfamily THII_3416 cce3003857b8f2f49b2f96ade9378829 808 Gene3D G3DSA:3.30.450.20 118 245 2.3E-21 T 15-10-2018 THII_3416 cce3003857b8f2f49b2f96ade9378829 808 SMART SM00086 460 502 5.0E-7 T 15-10-2018 IPR001610 PAC motif THII_3416 cce3003857b8f2f49b2f96ade9378829 808 SMART SM00086 334 376 9.6E-5 T 15-10-2018 IPR001610 PAC motif THII_3416 cce3003857b8f2f49b2f96ade9378829 808 SUPERFAMILY SSF55785 118 228 1.54E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_3416 cce3003857b8f2f49b2f96ade9378829 808 Pfam PF08447 PAS fold 158 227 4.4E-10 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_3416 cce3003857b8f2f49b2f96ade9378829 808 Pfam PF08447 PAS fold 411 493 3.4E-20 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_3416 cce3003857b8f2f49b2f96ade9378829 808 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 386 509 1.8E-22 T 15-10-2018 IPR000014 PAS domain THII_3416 cce3003857b8f2f49b2f96ade9378829 808 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 381 3.8E-15 T 15-10-2018 IPR000014 PAS domain THII_3416 cce3003857b8f2f49b2f96ade9378829 808 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 253 1.5E-22 T 15-10-2018 IPR000014 PAS domain THII_3416 cce3003857b8f2f49b2f96ade9378829 808 SMART SM00091 388 454 2.4E-12 T 15-10-2018 IPR000014 PAS domain THII_3416 cce3003857b8f2f49b2f96ade9378829 808 SMART SM00091 693 760 15.0 T 15-10-2018 IPR000014 PAS domain THII_3416 cce3003857b8f2f49b2f96ade9378829 808 SMART SM00091 131 198 9.9E-10 T 15-10-2018 IPR000014 PAS domain THII_3416 cce3003857b8f2f49b2f96ade9378829 808 SMART SM00091 259 327 2.7E-8 T 15-10-2018 IPR000014 PAS domain THII_3416 cce3003857b8f2f49b2f96ade9378829 808 Gene3D G3DSA:3.30.450.40 511 695 2.5E-7 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_2693 176021ee34a46743a748e4e1867db6cc 340 Gene3D G3DSA:3.30.70.270 143 339 4.4E-47 T 15-10-2018 THII_2693 176021ee34a46743a748e4e1867db6cc 340 SUPERFAMILY SSF55073 161 338 1.18E-36 T 15-10-2018 IPR029787 Nucleotide cyclase THII_2693 176021ee34a46743a748e4e1867db6cc 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 288 5.9E-37 T 15-10-2018 IPR000160 GGDEF domain THII_2693 176021ee34a46743a748e4e1867db6cc 340 SUPERFAMILY SSF55781 3 138 7.06E-7 T 15-10-2018 THII_2693 176021ee34a46743a748e4e1867db6cc 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 157 288 2.0E-36 T 15-10-2018 IPR000160 GGDEF domain THII_2693 176021ee34a46743a748e4e1867db6cc 340 SMART SM00267 145 339 4.7E-46 T 15-10-2018 IPR000160 GGDEF domain THII_2693 176021ee34a46743a748e4e1867db6cc 340 Gene3D G3DSA:3.30.450.40 1 139 2.5E-5 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_1286 6a745286053a0d12e95722d1e911e5c3 182 Pfam PF01584 CheW-like domain 40 174 1.8E-24 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1286 6a745286053a0d12e95722d1e911e5c3 182 SUPERFAMILY SSF50341 36 175 5.49E-27 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_1286 6a745286053a0d12e95722d1e911e5c3 182 Gene3D G3DSA:2.30.30.40 42 165 1.9E-19 T 15-10-2018 THII_1286 6a745286053a0d12e95722d1e911e5c3 182 Gene3D G3DSA:2.40.50.180 57 124 1.9E-19 T 15-10-2018 THII_1286 6a745286053a0d12e95722d1e911e5c3 182 SMART SM00260 34 172 3.6E-17 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 SUPERFAMILY SSF47384 455 538 1.0E-11 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 Gene3D G3DSA:1.10.287.130 413 534 1.4E-12 T 15-10-2018 THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 587 695 3.3E-10 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 TIGRFAM TIGR03785 marine_sort_HK: proteobacterial dedicated sortase system histidine kinase 4 695 4.7E-229 T 15-10-2018 IPR022510 Sortase system, histidine kinase THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 Gene3D G3DSA:2.60.40.1190 73 260 5.1E-12 T 15-10-2018 THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 SUPERFAMILY SSF49344 73 240 6.28E-10 T 15-10-2018 THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 SUPERFAMILY SSF55874 532 699 4.58E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 Pfam PF00512 His Kinase A (phospho-acceptor) domain 475 539 4.0E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 SMART SM00388 471 540 2.2E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 Pfam PF06452 Carbohydrate family 9 binding domain-like 127 251 2.0E-5 T 15-10-2018 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6717|MetaCyc: PWY-6784 THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 SMART SM00387 584 698 1.1E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2407 8fc3685db7ab73695be8162c2c20bb6f 705 Gene3D G3DSA:3.30.565.10 535 696 9.7E-27 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1691 711a95cf483efb18d99a89c6d4efad62 433 SUPERFAMILY SSF51905 146 288 1.36E-37 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1691 711a95cf483efb18d99a89c6d4efad62 433 Gene3D G3DSA:3.50.50.60 35 351 1.8E-115 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1691 711a95cf483efb18d99a89c6d4efad62 433 SUPERFAMILY SSF55424 364 433 1.1E-20 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 THII_1691 711a95cf483efb18d99a89c6d4efad62 433 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 34 151 8.0E-13 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_1691 711a95cf483efb18d99a89c6d4efad62 433 Gene3D G3DSA:3.90.760.10 362 433 5.2E-29 T 15-10-2018 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 THII_1691 711a95cf483efb18d99a89c6d4efad62 433 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 364 432 3.9E-27 T 15-10-2018 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 THII_1691 711a95cf483efb18d99a89c6d4efad62 433 Gene3D G3DSA:3.50.50.60 148 288 1.8E-115 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1691 711a95cf483efb18d99a89c6d4efad62 433 SUPERFAMILY SSF51905 34 183 5.56E-29 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2937 9d62bb2b928284f6ba933454993f561a 178 Gene3D G3DSA:1.10.520.20 2 106 1.3E-30 T 15-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2937 9d62bb2b928284f6ba933454993f561a 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 8.2E-48 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2937 9d62bb2b928284f6ba933454993f561a 178 SUPERFAMILY SSF47928 3 106 2.62E-23 T 15-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2937 9d62bb2b928284f6ba933454993f561a 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 17.47 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2937 9d62bb2b928284f6ba933454993f561a 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 9.2E-26 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2937 9d62bb2b928284f6ba933454993f561a 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 9.2E-26 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2937 9d62bb2b928284f6ba933454993f561a 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 9.2E-26 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2937 9d62bb2b928284f6ba933454993f561a 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 9.2E-26 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2937 9d62bb2b928284f6ba933454993f561a 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 9.2E-26 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2937 9d62bb2b928284f6ba933454993f561a 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 176 1.0E-41 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_1528 80d13dbf83eb96220361ca1815533f90 139 Gene3D G3DSA:3.30.420.270 59 128 4.5E-16 T 15-10-2018 THII_1528 80d13dbf83eb96220361ca1815533f90 139 TIGRFAM TIGR02801 tolR: protein TolR 11 135 3.4E-41 T 15-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 THII_1528 80d13dbf83eb96220361ca1815533f90 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 136 5.4E-27 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 THII_1528 80d13dbf83eb96220361ca1815533f90 139 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 4 135 26.711 T 15-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 THII_1162 c8cdc29a5e8a1f9495a33b2c1e454515 139 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 60 138 1.3E-18 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 THII_1162 c8cdc29a5e8a1f9495a33b2c1e454515 139 SUPERFAMILY SSF74653 34 139 1.44E-21 T 15-10-2018 THII_1162 c8cdc29a5e8a1f9495a33b2c1e454515 139 Gene3D G3DSA:3.30.1150.10 15 139 1.1E-27 T 15-10-2018 THII_1162 c8cdc29a5e8a1f9495a33b2c1e454515 139 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 61 139 6.3E-19 T 15-10-2018 IPR006260 TonB/TolA, C-terminal THII_2367 bc3258d0c68546fd3e57f4d58c1b7ace 222 Pfam PF00483 Nucleotidyl transferase 3 127 9.3E-18 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 THII_2367 bc3258d0c68546fd3e57f4d58c1b7ace 222 SUPERFAMILY SSF53448 1 219 4.06E-51 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2367 bc3258d0c68546fd3e57f4d58c1b7ace 222 Gene3D G3DSA:3.90.550.10 1 222 8.7E-58 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3927 73688546093c7b81687f00cba0ad9e4f 884 Pfam PF17092 Penicillin-binding protein OB-like domain 324 475 8.7E-21 T 15-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_3927 73688546093c7b81687f00cba0ad9e4f 884 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 72 787 4.6E-191 T 15-10-2018 THII_3927 73688546093c7b81687f00cba0ad9e4f 884 SUPERFAMILY SSF53955 50 262 1.86E-77 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_3927 73688546093c7b81687f00cba0ad9e4f 884 Gene3D G3DSA:3.40.710.10 258 327 1.9E-9 T 15-10-2018 THII_3927 73688546093c7b81687f00cba0ad9e4f 884 Gene3D G3DSA:2.40.50.140 328 425 8.2E-21 T 15-10-2018 THII_3927 73688546093c7b81687f00cba0ad9e4f 884 Pfam PF00912 Transglycosylase 64 236 9.1E-65 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_3927 73688546093c7b81687f00cba0ad9e4f 884 Gene3D G3DSA:3.40.710.10 426 855 4.7E-110 T 15-10-2018 THII_3927 73688546093c7b81687f00cba0ad9e4f 884 Gene3D G3DSA:1.10.3810.10 56 253 4.3E-78 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_3927 73688546093c7b81687f00cba0ad9e4f 884 Pfam PF00905 Penicillin binding protein transpeptidase domain 477 648 9.9E-27 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 THII_3927 73688546093c7b81687f00cba0ad9e4f 884 SUPERFAMILY SSF56601 218 800 3.62E-126 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like THII_1593 0131b53d3699e9c8cf458584732eb678 200 SUPERFAMILY SSF55718 28 117 5.1E-5 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily THII_1593 0131b53d3699e9c8cf458584732eb678 200 Pfam PF02036 SCP-2 sterol transfer family 14 110 1.2E-11 T 15-10-2018 IPR003033 SCP2 sterol-binding domain THII_2279 9365376f72d3b9e73890fb472d5f3219 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2279 9365376f72d3b9e73890fb472d5f3219 209 Gene3D G3DSA:1.10.1060.10 4 109 4.2E-7 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_2279 9365376f72d3b9e73890fb472d5f3219 209 Pfam PF13534 4Fe-4S dicluster domain 33 92 1.1E-8 T 15-10-2018 THII_2279 9365376f72d3b9e73890fb472d5f3219 209 SUPERFAMILY SSF46548 28 105 6.1E-14 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_3770 972d1ab5f9b99c4f6af0490e626c05f8 336 Pfam PF01734 Patatin-like phospholipase 7 208 1.6E-13 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 THII_3770 972d1ab5f9b99c4f6af0490e626c05f8 336 SUPERFAMILY SSF52151 2 238 3.14E-29 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_3770 972d1ab5f9b99c4f6af0490e626c05f8 336 Gene3D G3DSA:3.40.1090.10 1 332 1.3E-40 T 15-10-2018 THII_3266 f72a46d964bbde89a88d3a4546277012 181 Gene3D G3DSA:3.55.40.10 29 173 3.5E-12 T 15-10-2018 THII_3266 f72a46d964bbde89a88d3a4546277012 181 SUPERFAMILY SSF54523 7 152 1.02E-11 T 15-10-2018 THII_3266 f72a46d964bbde89a88d3a4546277012 181 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 9.0E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3266 f72a46d964bbde89a88d3a4546277012 181 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.4E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3266 f72a46d964bbde89a88d3a4546277012 181 ProSitePatterns PS00018 EF-hand calcium-binding domain. 84 96 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site THII_3173 cc27d24e2fbcb6dc974638324765596f 257 Gene3D G3DSA:3.40.50.300 4 252 7.2E-63 T 15-10-2018 THII_3173 cc27d24e2fbcb6dc974638324765596f 257 SUPERFAMILY SSF52540 6 236 9.63E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3173 cc27d24e2fbcb6dc974638324765596f 257 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_3173 cc27d24e2fbcb6dc974638324765596f 257 SMART SM00382 31 229 3.4E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3173 cc27d24e2fbcb6dc974638324765596f 257 Pfam PF00005 ABC transporter 23 172 7.9E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2141 0d9056ef6d73d8ccb2bdf116ac1cd5e3 375 SUPERFAMILY SSF51971 1 372 2.65E-46 T 15-10-2018 THII_2141 0d9056ef6d73d8ccb2bdf116ac1cd5e3 375 Pfam PF03275 UDP-galactopyranose mutase 153 354 1.5E-68 T 15-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 THII_2141 0d9056ef6d73d8ccb2bdf116ac1cd5e3 375 Gene3D G3DSA:3.40.50.720 156 283 1.3E-26 T 15-10-2018 THII_2141 0d9056ef6d73d8ccb2bdf116ac1cd5e3 375 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 3 373 4.5E-122 T 15-10-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 THII_2141 0d9056ef6d73d8ccb2bdf116ac1cd5e3 375 SUPERFAMILY SSF54373 252 320 4.51E-17 T 15-10-2018 THII_2141 0d9056ef6d73d8ccb2bdf116ac1cd5e3 375 Gene3D G3DSA:3.40.50.720 1 91 5.7E-33 T 15-10-2018 THII_2141 0d9056ef6d73d8ccb2bdf116ac1cd5e3 375 Gene3D G3DSA:3.40.50.720 284 375 5.9E-18 T 15-10-2018 THII_2141 0d9056ef6d73d8ccb2bdf116ac1cd5e3 375 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 74 7.1E-16 T 15-10-2018 THII_3916 207a9ed2db585e9fa58da9c27abdbb44 371 Gene3D G3DSA:3.90.550.10 6 268 3.3E-26 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3916 207a9ed2db585e9fa58da9c27abdbb44 371 Pfam PF00535 Glycosyl transferase family 2 12 144 1.5E-15 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_3916 207a9ed2db585e9fa58da9c27abdbb44 371 SUPERFAMILY SSF53448 12 306 1.97E-29 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1049 1a29ec85fe336b5f92bcc76a3562ddd8 962 SUPERFAMILY SSF52129 601 958 1.15E-56 T 15-10-2018 IPR029030 Caspase-like domain superfamily THII_1049 1a29ec85fe336b5f92bcc76a3562ddd8 962 Pfam PF08126 Propeptide_C25 23 197 4.1E-20 T 15-10-2018 IPR012600 Gingipain propeptide GO:0004197 THII_1049 1a29ec85fe336b5f92bcc76a3562ddd8 962 Gene3D G3DSA:3.40.50.1460 737 960 9.8E-35 T 15-10-2018 THII_1049 1a29ec85fe336b5f92bcc76a3562ddd8 962 Gene3D G3DSA:2.60.40.3800 16 221 1.0E-37 T 15-10-2018 IPR038490 Gingipain propeptide superfamily THII_1049 1a29ec85fe336b5f92bcc76a3562ddd8 962 Pfam PF01364 Peptidase family C25 605 958 3.6E-75 T 15-10-2018 IPR001769 Gingipain GO:0006508|GO:0008234 THII_1049 1a29ec85fe336b5f92bcc76a3562ddd8 962 Gene3D G3DSA:3.40.50.10390 596 735 6.4E-15 T 15-10-2018 IPR029031 Gingipain, N-terminal superfamily THII_2745 51a0422ae32b61a328785719c25faf1a 1113 Gene3D G3DSA:3.40.50.300 70 239 5.3E-10 T 15-10-2018 THII_2745 51a0422ae32b61a328785719c25faf1a 1113 SUPERFAMILY SSF52540 81 326 4.89E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2405 765d323f7ba8f5be480be8fc208b423f 193 TIGRFAM TIGR01076 sortase_fam: sortase 67 188 1.1E-14 T 15-10-2018 IPR005754 Sortase family THII_2405 765d323f7ba8f5be480be8fc208b423f 193 SUPERFAMILY SSF63817 56 189 4.84E-23 T 15-10-2018 IPR023365 Sortase domain superfamily THII_2405 765d323f7ba8f5be480be8fc208b423f 193 Gene3D G3DSA:2.40.260.10 36 192 5.1E-24 T 15-10-2018 IPR023365 Sortase domain superfamily THII_2405 765d323f7ba8f5be480be8fc208b423f 193 Pfam PF04203 Sortase family 68 187 1.6E-19 T 15-10-2018 IPR005754 Sortase family THII_2556 15c2f845d469b810b9707cea381d787b 510 SMART SM00065 29 176 6.1E-25 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_2556 15c2f845d469b810b9707cea381d787b 510 SMART SM00382 219 362 3.1E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2556 15c2f845d469b810b9707cea381d787b 510 Pfam PF13185 GAF domain 28 165 7.9E-15 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_2556 15c2f845d469b810b9707cea381d787b 510 SUPERFAMILY SSF52540 198 437 6.88E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2556 15c2f845d469b810b9707cea381d787b 510 Gene3D G3DSA:3.30.450.40 10 178 3.0E-37 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_2556 15c2f845d469b810b9707cea381d787b 510 Pfam PF02954 Bacterial regulatory protein, Fis family 467 501 6.5E-11 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2556 15c2f845d469b810b9707cea381d787b 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 285 300 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_2556 15c2f845d469b810b9707cea381d787b 510 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 469 486 9.2E-8 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2556 15c2f845d469b810b9707cea381d787b 510 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 486 506 9.2E-8 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2556 15c2f845d469b810b9707cea381d787b 510 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 411 420 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site THII_2556 15c2f845d469b810b9707cea381d787b 510 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 223 236 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_2556 15c2f845d469b810b9707cea381d787b 510 Pfam PF00158 Sigma-54 interaction domain 199 365 3.2E-73 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 THII_2556 15c2f845d469b810b9707cea381d787b 510 Gene3D G3DSA:3.40.50.300 187 369 4.2E-67 T 15-10-2018 THII_2556 15c2f845d469b810b9707cea381d787b 510 Gene3D G3DSA:1.10.10.60 461 509 1.4E-9 T 15-10-2018 THII_2556 15c2f845d469b810b9707cea381d787b 510 TIGRFAM TIGR01817 nifA: Nif-specific regulatory protein 12 441 9.4E-182 T 15-10-2018 IPR010113 Nif-specific regulatory protein GO:0003700|GO:0006355|GO:0009399 THII_2556 15c2f845d469b810b9707cea381d787b 510 Gene3D G3DSA:1.10.8.60 370 447 5.8E-23 T 15-10-2018 THII_2556 15c2f845d469b810b9707cea381d787b 510 SUPERFAMILY SSF55781 12 171 2.18E-20 T 15-10-2018 THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 Gene3D G3DSA:3.40.50.200 1194 1474 6.3E-14 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SUPERFAMILY SSF51126 421 583 1.55E-12 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 Pfam PF00801 PKD domain 1022 1078 5.0E-13 T 15-10-2018 IPR000601 PKD domain THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SUPERFAMILY SSF52743 1214 1404 2.09E-12 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SMART SM00710 356 381 4500.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SMART SM00710 282 304 7500.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SMART SM00710 511 533 2400.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SMART SM00710 305 326 8.1 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SMART SM00710 327 349 4500.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SMART SM00710 420 442 830.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SMART SM00710 392 414 3700.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SMART SM00710 488 509 18.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 Gene3D G3DSA:2.60.40.10 1014 1092 1.7E-16 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 Pfam PF13229 Right handed beta helix region 396 570 1.7E-14 T 15-10-2018 IPR039448 Right handed beta helix domain THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SUPERFAMILY SSF49299 1024 1091 2.35E-16 T 15-10-2018 IPR035986 PKD domain superfamily THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 Gene3D G3DSA:2.60.120.260 617 758 6.4E-14 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SMART SM00089 1010 1094 3.4E-12 T 15-10-2018 IPR022409 PKD/Chitinase domain THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SUPERFAMILY SSF51126 13 471 3.32E-22 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_2659 815d4f526dab5868d3c0948bebe37b09 1616 SUPERFAMILY SSF49785 620 758 1.45E-10 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily THII_3801 003ca82c7bb09e3f8b345b7d95be1505 657 TIGRFAM TIGR03185 DNA_S_dndD: DNA sulfur modification protein DndD 1 654 4.3E-180 T 15-10-2018 IPR017599 DNA sulphur modification protein DndD THII_3801 003ca82c7bb09e3f8b345b7d95be1505 657 Pfam PF13555 P-loop containing region of AAA domain 5 57 1.2E-6 T 15-10-2018 THII_3801 003ca82c7bb09e3f8b345b7d95be1505 657 SUPERFAMILY SSF52540 1 620 4.83E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3801 003ca82c7bb09e3f8b345b7d95be1505 657 Gene3D G3DSA:3.40.50.300 1 310 5.1E-21 T 15-10-2018 THII_3801 003ca82c7bb09e3f8b345b7d95be1505 657 Gene3D G3DSA:3.40.50.300 377 631 7.0E-14 T 15-10-2018 THII_1957 e24dfefb13536e161b92ce972396a535 717 Gene3D G3DSA:3.30.980.40 327 425 1.8E-6 T 15-10-2018 THII_1957 e24dfefb13536e161b92ce972396a535 717 Pfam PF01580 FtsK/SpoIIIE family 429 630 2.6E-38 T 15-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 THII_1957 e24dfefb13536e161b92ce972396a535 717 Gene3D G3DSA:3.40.50.300 426 714 6.0E-88 T 15-10-2018 THII_1957 e24dfefb13536e161b92ce972396a535 717 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 24 196 5.3E-38 T 15-10-2018 IPR025199 DNA translocase FtsK, 4TM region THII_1957 e24dfefb13536e161b92ce972396a535 717 SUPERFAMILY SSF52540 428 700 1.17E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1884 f0f81abe28a91436550a809cf72c79d7 849 Gene3D G3DSA:1.10.287.130 359 456 8.3E-31 T 15-10-2018 THII_1884 f0f81abe28a91436550a809cf72c79d7 849 SUPERFAMILY SSF55874 447 623 5.37E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1884 f0f81abe28a91436550a809cf72c79d7 849 SUPERFAMILY SSF52172 647 768 2.13E-32 T 15-10-2018 IPR011006 CheY-like superfamily THII_1884 f0f81abe28a91436550a809cf72c79d7 849 Gene3D G3DSA:3.40.50.12740 648 835 1.0E-33 T 15-10-2018 THII_1884 f0f81abe28a91436550a809cf72c79d7 849 Gene3D G3DSA:3.30.565.10 457 625 2.8E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1884 f0f81abe28a91436550a809cf72c79d7 849 SUPERFAMILY SSF47384 379 459 1.86E-24 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1884 f0f81abe28a91436550a809cf72c79d7 849 Pfam PF00072 Response regulator receiver domain 651 762 7.8E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1884 f0f81abe28a91436550a809cf72c79d7 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 5.2E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1884 f0f81abe28a91436550a809cf72c79d7 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 619 5.2E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1884 f0f81abe28a91436550a809cf72c79d7 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 577 5.2E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1884 f0f81abe28a91436550a809cf72c79d7 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 563 5.2E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1884 f0f81abe28a91436550a809cf72c79d7 849 SMART SM00387 513 622 1.7E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1884 f0f81abe28a91436550a809cf72c79d7 849 SMART SM00448 649 762 1.2E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1884 f0f81abe28a91436550a809cf72c79d7 849 Pfam PF00512 His Kinase A (phospho-acceptor) domain 392 458 1.6E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1884 f0f81abe28a91436550a809cf72c79d7 849 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 514 621 4.2E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1884 f0f81abe28a91436550a809cf72c79d7 849 SMART SM00388 392 458 2.0E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1779 19a9a5ca050245e13be41cc321d59d74 329 SUPERFAMILY SSF55486 42 220 9.23E-20 T 15-10-2018 THII_1779 19a9a5ca050245e13be41cc321d59d74 329 Gene3D G3DSA:3.40.390.10 41 222 8.8E-21 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 THII_1779 19a9a5ca050245e13be41cc321d59d74 329 SMART SM00235 41 221 0.004 T 15-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 THII_1779 19a9a5ca050245e13be41cc321d59d74 329 Pfam PF01400 Astacin (Peptidase family M12A) 148 171 5.0E-5 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 THII_0743 f5126378a9f3b6f7f84d9409eec8eef3 372 Gene3D G3DSA:3.30.360.10 129 289 8.7E-87 T 15-10-2018 THII_0743 f5126378a9f3b6f7f84d9409eec8eef3 372 Gene3D G3DSA:3.40.50.720 7 322 8.7E-87 T 15-10-2018 THII_0743 f5126378a9f3b6f7f84d9409eec8eef3 372 SUPERFAMILY SSF55347 131 314 2.83E-20 T 15-10-2018 THII_0743 f5126378a9f3b6f7f84d9409eec8eef3 372 SUPERFAMILY SSF51735 3 152 1.13E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0743 f5126378a9f3b6f7f84d9409eec8eef3 372 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 124 2.5E-24 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 THII_2341 f284b823335c900c6afd03efcc1be6c0 271 SUPERFAMILY SSF53613 5 258 1.1E-62 T 15-10-2018 IPR029056 Ribokinase-like THII_2341 f284b823335c900c6afd03efcc1be6c0 271 Pfam PF08543 Phosphomethylpyrimidine kinase 16 251 3.6E-66 T 15-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 THII_2341 f284b823335c900c6afd03efcc1be6c0 271 Gene3D G3DSA:3.40.1190.20 1 269 4.8E-72 T 15-10-2018 IPR029056 Ribokinase-like THII_1128 37fc44f7b7aeece3bc0fcc193b058a45 480 Gene3D G3DSA:1.10.510.10 128 329 2.2E-14 T 15-10-2018 THII_1128 37fc44f7b7aeece3bc0fcc193b058a45 480 SUPERFAMILY SSF56112 23 261 1.91E-19 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_1128 37fc44f7b7aeece3bc0fcc193b058a45 480 SMART SM00220 19 331 0.0024 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_1128 37fc44f7b7aeece3bc0fcc193b058a45 480 Pfam PF00069 Protein kinase domain 152 284 7.7E-11 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 THII_0293 4e090f6c8b446533d5fed43e1c29e7bb 145 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 15-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0293 4e090f6c8b446533d5fed43e1c29e7bb 145 Gene3D G3DSA:3.100.10.10 67 145 1.9E-13 T 15-10-2018 THII_0293 4e090f6c8b446533d5fed43e1c29e7bb 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.228 T 15-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 THII_0293 4e090f6c8b446533d5fed43e1c29e7bb 145 SUPERFAMILY SSF52080 4 144 2.62E-43 T 15-10-2018 IPR036227 Ribosomal L18e/L15P superfamily THII_0293 4e090f6c8b446533d5fed43e1c29e7bb 145 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 144 3.3E-47 T 15-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0293 4e090f6c8b446533d5fed43e1c29e7bb 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 8.6E-29 T 15-10-2018 IPR021131 Ribosomal protein L18e/L15P THII_3544 d3f080ac600e80c0d5b079d8ec88859f 114 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 19.373 T 15-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 THII_3544 d3f080ac600e80c0d5b079d8ec88859f 114 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 8.4E-28 T 15-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 THII_3544 d3f080ac600e80c0d5b079d8ec88859f 114 Gene3D G3DSA:3.30.2320.80 1 114 9.5E-29 T 15-10-2018 THII_3544 d3f080ac600e80c0d5b079d8ec88859f 114 PIRSF PIRSF004761 1 114 9.9E-26 T 15-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 THII_3544 d3f080ac600e80c0d5b079d8ec88859f 114 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 15-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site THII_0657 a8f7d29ac1dfb5603bbff52de4d32c6e 294 SUPERFAMILY SSF53850 92 283 1.32E-13 T 15-10-2018 THII_0657 a8f7d29ac1dfb5603bbff52de4d32c6e 294 SUPERFAMILY SSF46785 1 82 2.14E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_0657 a8f7d29ac1dfb5603bbff52de4d32c6e 294 Pfam PF03466 LysR substrate binding domain 92 275 1.7E-9 T 15-10-2018 IPR005119 LysR, substrate-binding THII_0657 a8f7d29ac1dfb5603bbff52de4d32c6e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_0657 a8f7d29ac1dfb5603bbff52de4d32c6e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_0657 a8f7d29ac1dfb5603bbff52de4d32c6e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_0657 a8f7d29ac1dfb5603bbff52de4d32c6e 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.4E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_0657 a8f7d29ac1dfb5603bbff52de4d32c6e 294 Gene3D G3DSA:3.40.190.290 92 283 3.5E-6 T 15-10-2018 THII_0657 a8f7d29ac1dfb5603bbff52de4d32c6e 294 Gene3D G3DSA:1.10.10.10 1 91 9.9E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2979 14e511db31f771c88b3616a0b70546bd 366 Pfam PF13439 Glycosyltransferase Family 4 59 184 5.9E-8 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 THII_2979 14e511db31f771c88b3616a0b70546bd 366 Pfam PF00534 Glycosyl transferases group 1 188 326 2.6E-25 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_2979 14e511db31f771c88b3616a0b70546bd 366 SUPERFAMILY SSF53756 8 353 1.3E-49 T 15-10-2018 THII_2979 14e511db31f771c88b3616a0b70546bd 366 Gene3D G3DSA:3.40.50.2000 170 341 7.4E-35 T 15-10-2018 THII_2764 39ec1665d2e670129b166c93c5ab1157 479 Gene3D G3DSA:1.10.45.10 412 452 7.6E-7 T 15-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 THII_2764 39ec1665d2e670129b166c93c5ab1157 479 Gene3D G3DSA:3.30.70.2190 211 324 5.2E-6 T 15-10-2018 THII_2764 39ec1665d2e670129b166c93c5ab1157 479 Gene3D G3DSA:3.30.43.10 1 88 3.7E-20 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 THII_2764 39ec1665d2e670129b166c93c5ab1157 479 Pfam PF01565 FAD binding domain 36 174 3.2E-38 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 THII_2764 39ec1665d2e670129b166c93c5ab1157 479 SUPERFAMILY SSF55103 184 454 5.89E-72 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 THII_2764 39ec1665d2e670129b166c93c5ab1157 479 Gene3D G3DSA:3.30.70.2740 330 411 5.7E-8 T 15-10-2018 THII_2764 39ec1665d2e670129b166c93c5ab1157 479 Pfam PF02913 FAD linked oxidases, C-terminal domain 210 450 3.1E-66 T 15-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 THII_2764 39ec1665d2e670129b166c93c5ab1157 479 Gene3D G3DSA:3.30.465.10 90 210 1.6E-32 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_2764 39ec1665d2e670129b166c93c5ab1157 479 SUPERFAMILY SSF56176 2 211 4.35E-63 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 THII_1541 e4cbcfe6dee78c05722346f7063036d7 321 SUPERFAMILY SSF55073 158 318 7.46E-50 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1541 e4cbcfe6dee78c05722346f7063036d7 321 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 314 7.1E-54 T 15-10-2018 IPR000160 GGDEF domain THII_1541 e4cbcfe6dee78c05722346f7063036d7 321 Pfam PF00072 Response regulator receiver domain 12 123 3.0E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1541 e4cbcfe6dee78c05722346f7063036d7 321 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 149 317 6.6E-52 T 15-10-2018 IPR000160 GGDEF domain THII_1541 e4cbcfe6dee78c05722346f7063036d7 321 SUPERFAMILY SSF52172 8 153 1.57E-44 T 15-10-2018 IPR011006 CheY-like superfamily THII_1541 e4cbcfe6dee78c05722346f7063036d7 321 Gene3D G3DSA:3.40.50.2300 2 141 1.7E-41 T 15-10-2018 THII_1541 e4cbcfe6dee78c05722346f7063036d7 321 SMART SM00448 9 122 7.9E-43 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1541 e4cbcfe6dee78c05722346f7063036d7 321 Gene3D G3DSA:3.30.70.270 142 317 1.1E-59 T 15-10-2018 THII_1541 e4cbcfe6dee78c05722346f7063036d7 321 SMART SM00267 142 318 3.1E-74 T 15-10-2018 IPR000160 GGDEF domain THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 Gene3D G3DSA:3.40.50.300 136 317 1.6E-60 T 15-10-2018 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 SMART SM00448 4 114 8.5E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 Gene3D G3DSA:1.10.8.60 318 399 6.8E-22 T 15-10-2018 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 Pfam PF00158 Sigma-54 interaction domain 147 313 1.1E-65 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 Gene3D G3DSA:3.40.50.2300 2 135 3.8E-30 T 15-10-2018 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 Pfam PF00072 Response regulator receiver domain 7 112 4.6E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 Gene3D G3DSA:1.10.10.60 434 491 4.4E-13 T 15-10-2018 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 SUPERFAMILY SSF52172 6 191 7.83E-38 T 15-10-2018 IPR011006 CheY-like superfamily THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 Pfam PF02954 Bacterial regulatory protein, Fis family 450 490 6.9E-14 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 473 493 8.5E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 456 473 8.5E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 SMART SM00382 167 295 1.2E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 SUPERFAMILY SSF46689 362 490 1.97E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 SUPERFAMILY SSF52540 147 389 6.62E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2752 2505339e47a93ed70cc700aaee9f79d4 498 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site THII_1975 47a1552ee9f4b3aa1080081251c37300 2085 Gene3D G3DSA:2.60.40.60 1779 1878 4.5E-7 T 15-10-2018 THII_1975 47a1552ee9f4b3aa1080081251c37300 2085 SUPERFAMILY SSF51126 7 344 2.08E-26 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_1975 47a1552ee9f4b3aa1080081251c37300 2085 SUPERFAMILY SSF49313 1782 1873 3.57E-7 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_1975 47a1552ee9f4b3aa1080081251c37300 2085 SMART SM00112 1589 1665 0.2 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 THII_1975 47a1552ee9f4b3aa1080081251c37300 2085 SMART SM00112 1805 1881 0.03 T 15-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 THII_1975 47a1552ee9f4b3aa1080081251c37300 2085 Gene3D G3DSA:2.60.40.60 1564 1659 2.0E-5 T 15-10-2018 THII_1975 47a1552ee9f4b3aa1080081251c37300 2085 Gene3D G3DSA:2.60.40.10 972 1075 6.5E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1975 47a1552ee9f4b3aa1080081251c37300 2085 SUPERFAMILY SSF49313 1574 1659 8.28E-6 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 THII_1975 47a1552ee9f4b3aa1080081251c37300 2085 SUPERFAMILY SSF51126 339 514 1.38E-9 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0062 ad5a89df90e2c9b0a896878b403565c8 723 SUPERFAMILY SSF52151 15 300 1.6E-55 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_0062 ad5a89df90e2c9b0a896878b403565c8 723 Gene3D G3DSA:3.10.20.310 327 401 1.4E-5 T 15-10-2018 THII_0062 ad5a89df90e2c9b0a896878b403565c8 723 Pfam PF01734 Patatin-like phospholipase 21 210 1.9E-29 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 THII_0062 ad5a89df90e2c9b0a896878b403565c8 723 Gene3D G3DSA:3.40.1090.10 3 115 6.9E-28 T 15-10-2018 THII_0062 ad5a89df90e2c9b0a896878b403565c8 723 Gene3D G3DSA:3.40.1090.10 121 262 3.8E-21 T 15-10-2018 THII_0062 ad5a89df90e2c9b0a896878b403565c8 723 Gene3D G3DSA:2.40.160.50 443 708 9.1E-17 T 15-10-2018 THII_0062 ad5a89df90e2c9b0a896878b403565c8 723 Pfam PF01103 Surface antigen 388 637 3.9E-14 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 THII_2433 586d8e116b3dd19a8d0ae4629feea998 446 ProSitePatterns PS01219 Ammonium transporters signature. 199 224 - T 15-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 THII_2433 586d8e116b3dd19a8d0ae4629feea998 446 Pfam PF00909 Ammonium Transporter Family 37 444 8.0E-123 T 15-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 THII_2433 586d8e116b3dd19a8d0ae4629feea998 446 Gene3D G3DSA:1.10.3430.10 20 446 1.6E-141 T 15-10-2018 IPR029020 Ammonium/urea transporter THII_2433 586d8e116b3dd19a8d0ae4629feea998 446 SUPERFAMILY SSF111352 32 425 9.29E-131 T 15-10-2018 THII_2433 586d8e116b3dd19a8d0ae4629feea998 446 TIGRFAM TIGR00836 amt: ammonium transporter 35 444 5.6E-140 T 15-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 THII_2404 be689da2911fc2002fc00c208383410c 425 Pfam PF06097 Bacterial protein of unknown function (DUF945) 7 418 6.8E-45 T 15-10-2018 IPR010352 Protein of unknown function DUF945 THII_3328 78ce4edfe019b2207359aa1df14bf5bb 246 ProSitePatterns PS00018 EF-hand calcium-binding domain. 172 184 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site THII_3328 78ce4edfe019b2207359aa1df14bf5bb 246 SUPERFAMILY SSF47473 106 202 5.58E-14 T 15-10-2018 IPR011992 EF-hand domain pair THII_3328 78ce4edfe019b2207359aa1df14bf5bb 246 ProSitePatterns PS00018 EF-hand calcium-binding domain. 133 145 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site THII_3328 78ce4edfe019b2207359aa1df14bf5bb 246 Pfam PF13202 EF hand 167 184 9.3E-5 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_3328 78ce4edfe019b2207359aa1df14bf5bb 246 Pfam PF13202 EF hand 107 123 4.6E-4 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_3328 78ce4edfe019b2207359aa1df14bf5bb 246 Pfam PF13202 EF hand 128 146 0.011 T 15-10-2018 IPR002048 EF-hand domain GO:0005509 THII_3328 78ce4edfe019b2207359aa1df14bf5bb 246 ProSitePatterns PS00018 EF-hand calcium-binding domain. 109 121 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site THII_3328 78ce4edfe019b2207359aa1df14bf5bb 246 Gene3D G3DSA:1.10.238.10 165 222 4.3E-6 T 15-10-2018 THII_3328 78ce4edfe019b2207359aa1df14bf5bb 246 Gene3D G3DSA:1.10.238.10 96 156 1.2E-9 T 15-10-2018 THII_3034 4844543c325bc35e987e9be794f4ebaa 230 Gene3D G3DSA:1.10.10.10 131 229 1.9E-36 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3034 4844543c325bc35e987e9be794f4ebaa 230 SMART SM00862 151 226 2.0E-26 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_3034 4844543c325bc35e987e9be794f4ebaa 230 Pfam PF00072 Response regulator receiver domain 6 118 6.7E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3034 4844543c325bc35e987e9be794f4ebaa 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 2.0E-26 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_3034 4844543c325bc35e987e9be794f4ebaa 230 Gene3D G3DSA:3.40.50.2300 2 130 4.5E-41 T 15-10-2018 THII_3034 4844543c325bc35e987e9be794f4ebaa 230 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 227 3.8E-107 T 15-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 THII_3034 4844543c325bc35e987e9be794f4ebaa 230 SUPERFAMILY SSF52172 2 134 4.27E-45 T 15-10-2018 IPR011006 CheY-like superfamily THII_3034 4844543c325bc35e987e9be794f4ebaa 230 SMART SM00448 4 117 3.2E-47 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3034 4844543c325bc35e987e9be794f4ebaa 230 SUPERFAMILY SSF46894 127 227 2.34E-31 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 THII_0868 c11058a5f4ea2223b2de3442f99aef04 146 SUPERFAMILY SSF52788 4 139 1.83E-38 T 15-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily THII_0868 c11058a5f4ea2223b2de3442f99aef04 146 Gene3D G3DSA:3.40.50.2300 1 141 9.8E-46 T 15-10-2018 THII_0868 c11058a5f4ea2223b2de3442f99aef04 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 137 7.5E-16 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I THII_0868 c11058a5f4ea2223b2de3442f99aef04 146 SMART SM00226 4 140 3.0E-38 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I THII_0184 b1fc90b48547af56c4e37fa26dd58229 342 Gene3D G3DSA:3.30.420.40 2 320 1.2E-109 T 15-10-2018 THII_0184 b1fc90b48547af56c4e37fa26dd58229 342 Gene3D G3DSA:3.40.367.20 101 309 1.2E-109 T 15-10-2018 THII_0184 b1fc90b48547af56c4e37fa26dd58229 342 Pfam PF02685 Glucokinase 3 322 2.2E-102 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 THII_0184 b1fc90b48547af56c4e37fa26dd58229 342 SUPERFAMILY SSF53067 1 324 7.26E-52 T 15-10-2018 THII_0184 b1fc90b48547af56c4e37fa26dd58229 342 Hamap MF_00524 Glucokinase [glk]. 1 326 32.069 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 THII_0184 b1fc90b48547af56c4e37fa26dd58229 342 TIGRFAM TIGR00749 glk: glucokinase 3 319 8.4E-85 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 THII_1768 3cca7c263bdac542f1057ca06540337e 87 SUPERFAMILY SSF64307 3 72 1.44E-5 T 15-10-2018 IPR036868 TusA-like domain superfamily THII_1768 3cca7c263bdac542f1057ca06540337e 87 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 7 72 1.2E-12 T 15-10-2018 IPR018720 Domain of unknown function DUF2249 THII_3001 f5981932a8966dcf1690625e8b07df5a 84 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 9.4E-40 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_3001 f5981932a8966dcf1690625e8b07df5a 84 SUPERFAMILY SSF143011 1 83 3.66E-29 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_3001 f5981932a8966dcf1690625e8b07df5a 84 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 3.9E-37 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_3001 f5981932a8966dcf1690625e8b07df5a 84 Gene3D G3DSA:3.30.2310.20 1 84 4.1E-40 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 230 819 3.7E-148 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 SUPERFAMILY SSF81653 330 416 7.19E-23 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 286 804 3.7E-81 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 SUPERFAMILY SSF56784 514 817 3.93E-51 T 15-10-2018 IPR036412 HAD-like superfamily THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 Gene3D G3DSA:2.70.150.20 302 421 1.4E-33 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 517 523 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 SUPERFAMILY SSF81665 278 779 9.42E-12 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 Gene3D G3DSA:3.40.1110.10 526 649 3.2E-74 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 5 88 2.9E-25 T 15-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 Gene3D G3DSA:3.30.70.100 87 160 4.7E-15 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 Pfam PF00403 Heavy-metal-associated domain 99 156 4.7E-10 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 248 819 5.6E-168 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 Gene3D G3DSA:3.40.50.1000 496 769 3.2E-74 T 15-10-2018 IPR023214 HAD superfamily THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 Pfam PF00702 haloacid dehalogenase-like hydrolase 514 730 1.8E-33 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 ProSitePatterns PS01229 Hypothetical cof family signature 2. 717 739 - T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 Pfam PF00122 E1-E2 ATPase 314 494 1.0E-48 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 SUPERFAMILY SSF55008 90 163 1.7E-18 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 515 529 6.3E-23 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 674 6.3E-23 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 367 381 6.3E-23 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 736 6.3E-23 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 740 752 6.3E-23 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 PRINTS PR00943 Copper-transporting ATPase signature 138 158 1.5E-5 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 PRINTS PR00943 Copper-transporting ATPase signature 440 454 1.5E-5 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 PRINTS PR00943 Copper-transporting ATPase signature 694 711 1.5E-5 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 PRINTS PR00943 Copper-transporting ATPase signature 283 302 1.5E-5 T 15-10-2018 THII_3595 24a8a42e818f2fc2bcd8a96f57e2f5cf 845 PRINTS PR00943 Copper-transporting ATPase signature 303 321 1.5E-5 T 15-10-2018 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 844 858 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0872 00bf6e838da6b13db389286eb5a70195 1206 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 800 814 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 816 857 2.9E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 985 1024 2.6E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 1026 1065 0.0083 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 647 686 1.8E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 1070 1109 0.0088 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 860 897 0.054 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 689 727 7.1E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 901 937 79.0 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 605 644 0.014 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 732 771 1.8E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 774 813 1.3E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 1112 1151 4.1E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SMART SM00320 940 980 0.0084 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SUPERFAMILY SSF50978 607 938 1.92E-77 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Gene3D G3DSA:2.130.10.10 1029 1205 7.8E-30 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Pfam PF00400 WD domain, G-beta repeat 742 771 8.4E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Pfam PF00400 WD domain, G-beta repeat 817 857 5.1E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Pfam PF00400 WD domain, G-beta repeat 700 727 0.0013 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Pfam PF00400 WD domain, G-beta repeat 1114 1151 0.038 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Pfam PF00400 WD domain, G-beta repeat 655 686 0.0077 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Pfam PF00400 WD domain, G-beta repeat 950 979 0.013 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Pfam PF00400 WD domain, G-beta repeat 608 644 0.16 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Pfam PF00400 WD domain, G-beta repeat 776 813 9.9E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Pfam PF00400 WD domain, G-beta repeat 988 1018 5.0E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SUPERFAMILY SSF52540 15 272 5.23E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Gene3D G3DSA:3.40.50.300 13 190 1.2E-5 T 15-10-2018 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1052 1066 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Gene3D G3DSA:2.130.10.10 592 738 2.6E-34 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Gene3D G3DSA:2.130.10.10 838 948 3.7E-21 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 714 728 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Gene3D G3DSA:2.130.10.10 739 837 6.1E-31 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 Gene3D G3DSA:2.130.10.10 949 1028 2.1E-19 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 PRINTS PR00320 G protein beta WD-40 repeat signature 844 858 2.8E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_0872 00bf6e838da6b13db389286eb5a70195 1206 PRINTS PR00320 G protein beta WD-40 repeat signature 800 814 2.8E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_0872 00bf6e838da6b13db389286eb5a70195 1206 PRINTS PR00320 G protein beta WD-40 repeat signature 758 772 2.8E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_0872 00bf6e838da6b13db389286eb5a70195 1206 SUPERFAMILY SSF50978 914 1199 2.38E-53 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_0872 00bf6e838da6b13db389286eb5a70195 1206 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1138 1152 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0872 00bf6e838da6b13db389286eb5a70195 1206 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 758 772 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 Pfam PF13424 Tetratricopeptide repeat 129 201 9.1E-8 T 15-10-2018 THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 Pfam PF12770 CHAT domain 481 752 5.0E-65 T 15-10-2018 IPR024983 CHAT domain THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 Gene3D G3DSA:1.25.40.10 91 258 1.8E-18 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 SUPERFAMILY SSF48452 38 222 4.55E-21 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 SMART SM00028 264 297 30.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 SMART SM00028 90 123 350.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 SMART SM00028 50 83 0.82 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 SMART SM00028 130 163 0.12 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 SMART SM00028 302 335 250.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 SMART SM00028 170 203 76.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 Gene3D G3DSA:1.25.40.10 264 336 5.6E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 SUPERFAMILY SSF48452 246 368 7.59E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0131 f05b4fe18809cb6c7edcd17c43cbf6f0 754 Gene3D G3DSA:1.25.40.10 19 90 1.3E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1399 8fc2de9b406a58a7e0c469b2edcad836 251 SMART SM00028 174 207 57.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1399 8fc2de9b406a58a7e0c469b2edcad836 251 SMART SM00028 104 137 220.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1399 8fc2de9b406a58a7e0c469b2edcad836 251 SMART SM00028 140 173 0.4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1399 8fc2de9b406a58a7e0c469b2edcad836 251 SMART SM00028 70 103 1.7E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1399 8fc2de9b406a58a7e0c469b2edcad836 251 SMART SM00028 36 69 0.085 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1399 8fc2de9b406a58a7e0c469b2edcad836 251 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 239 3.1E-73 T 15-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW THII_1399 8fc2de9b406a58a7e0c469b2edcad836 251 SUPERFAMILY SSF48452 42 216 1.67E-25 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1399 8fc2de9b406a58a7e0c469b2edcad836 251 Gene3D G3DSA:1.25.40.10 32 249 2.3E-50 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1399 8fc2de9b406a58a7e0c469b2edcad836 251 Pfam PF13432 Tetratricopeptide repeat 40 104 1.5E-8 T 15-10-2018 THII_1399 8fc2de9b406a58a7e0c469b2edcad836 251 Pfam PF14559 Tetratricopeptide repeat 151 208 1.1E-5 T 15-10-2018 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Gene3D G3DSA:3.40.50.11380 350 705 2.1E-110 T 15-10-2018 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Gene3D G3DSA:3.40.50.2000 518 698 2.1E-110 T 15-10-2018 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 SUPERFAMILY SSF48452 121 320 1.8E-55 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Pfam PF13181 Tetratricopeptide repeat 39 66 0.0072 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Pfam PF13431 Tetratricopeptide repeat 197 221 1.7E-5 T 15-10-2018 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Pfam PF13414 TPR repeat 147 188 3.5E-15 T 15-10-2018 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Pfam PF13414 TPR repeat 84 119 1.6E-8 T 15-10-2018 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Gene3D G3DSA:1.25.40.10 4 109 1.4E-24 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Gene3D G3DSA:1.25.40.10 149 179 7.5E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Gene3D G3DSA:1.25.40.10 110 148 6.2E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 SUPERFAMILY SSF48452 6 175 1.67E-39 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Gene3D G3DSA:1.25.40.10 248 329 2.8E-17 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Pfam PF13844 Glycosyl transferase family 41 529 716 3.0E-19 T 15-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Pfam PF13844 Glycosyl transferase family 41 363 502 2.1E-29 T 15-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 SMART SM00028 38 71 0.32 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 SMART SM00028 4 37 0.45 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 SMART SM00028 174 207 1.1E-9 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 SMART SM00028 140 173 2.8E-9 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 SMART SM00028 208 241 0.0022 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 SMART SM00028 242 275 0.001 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 SMART SM00028 276 309 0.0012 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 SMART SM00028 72 105 1.1E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 SMART SM00028 106 139 3.6E-5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Pfam PF13432 Tetratricopeptide repeat 248 309 0.0025 T 15-10-2018 THII_2701 2cb46f2df4d042b8d98db981ab193348 724 Gene3D G3DSA:1.25.40.10 180 247 1.0E-19 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3552 b1353145d08f67b5a2c5cdf544b9fc50 778 Gene3D G3DSA:3.40.50.300 5 178 3.6E-48 T 15-10-2018 THII_3552 b1353145d08f67b5a2c5cdf544b9fc50 778 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 162 1.6E-15 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_3552 b1353145d08f67b5a2c5cdf544b9fc50 778 Pfam PF07664 Ferrous iron transport protein B C terminus 463 515 2.9E-22 T 15-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 THII_3552 b1353145d08f67b5a2c5cdf544b9fc50 778 Pfam PF07670 Nucleoside recognition 360 450 1.6E-14 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 THII_3552 b1353145d08f67b5a2c5cdf544b9fc50 778 Pfam PF07670 Nucleoside recognition 521 705 5.2E-34 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 THII_3552 b1353145d08f67b5a2c5cdf544b9fc50 778 Pfam PF02421 Ferrous iron transport protein B 6 162 2.3E-64 T 15-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 THII_3552 b1353145d08f67b5a2c5cdf544b9fc50 778 SUPERFAMILY SSF52540 5 170 2.55E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3552 b1353145d08f67b5a2c5cdf544b9fc50 778 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 702 1.2E-193 T 15-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 THII_3552 b1353145d08f67b5a2c5cdf544b9fc50 778 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.0E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_3552 b1353145d08f67b5a2c5cdf544b9fc50 778 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 2.0E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_1460 09d683102ac28d7e530151c08deb2a6b 445 Pfam PF05193 Peptidase M16 inactive domain 193 368 1.3E-32 T 15-10-2018 IPR007863 Peptidase M16, C-terminal THII_1460 09d683102ac28d7e530151c08deb2a6b 445 Gene3D G3DSA:3.30.830.10 246 438 1.2E-52 T 15-10-2018 THII_1460 09d683102ac28d7e530151c08deb2a6b 445 Pfam PF00675 Insulinase (Peptidase family M16) 46 181 4.9E-12 T 15-10-2018 IPR011765 Peptidase M16, N-terminal THII_1460 09d683102ac28d7e530151c08deb2a6b 445 Gene3D G3DSA:3.30.830.10 30 240 1.3E-51 T 15-10-2018 THII_1460 09d683102ac28d7e530151c08deb2a6b 445 SUPERFAMILY SSF63411 26 233 7.03E-48 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 THII_1460 09d683102ac28d7e530151c08deb2a6b 445 SUPERFAMILY SSF63411 254 439 8.29E-46 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 THII_1725 373fa434162eca98592b07e688caa293 238 Pfam PF06051 Domain of Unknown Function (DUF928) 57 237 4.1E-37 T 15-10-2018 IPR010328 Protein of unknown function DUF928 THII_3297 50575dc3f4e0fe2af0d7128167021dc1 75 Gene3D G3DSA:3.40.1620.40 3 68 4.7E-23 T 15-10-2018 THII_3297 50575dc3f4e0fe2af0d7128167021dc1 75 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 2.2E-16 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_3297 50575dc3f4e0fe2af0d7128167021dc1 75 SUPERFAMILY SSF143120 1 68 1.06E-16 T 15-10-2018 IPR036165 YefM-like superfamily THII_3806 e904c8a170cf2839cf488cdcd58a9d6b 420 Gene3D G3DSA:1.20.1530.20 2 281 4.9E-59 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily THII_3806 e904c8a170cf2839cf488cdcd58a9d6b 420 Gene3D G3DSA:1.20.1530.20 290 420 3.3E-34 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily THII_3806 e904c8a170cf2839cf488cdcd58a9d6b 420 Pfam PF00999 Sodium/hydrogen exchanger family 9 272 1.3E-45 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 THII_3806 e904c8a170cf2839cf488cdcd58a9d6b 420 Pfam PF00999 Sodium/hydrogen exchanger family 299 418 3.0E-22 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 THII_1546 a9f44c53f54f1001e3f502f2a852b83a 677 SUPERFAMILY SSF55486 1 674 1.04E-203 T 15-10-2018 THII_1546 a9f44c53f54f1001e3f502f2a852b83a 677 Pfam PF01432 Peptidase family M3 223 674 4.6E-157 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 THII_1546 a9f44c53f54f1001e3f502f2a852b83a 677 Gene3D G3DSA:1.10.1370.10 140 607 2.2E-269 T 15-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 THII_1546 a9f44c53f54f1001e3f502f2a852b83a 677 Gene3D G3DSA:1.10.1370.40 13 672 2.2E-269 T 15-10-2018 THII_3038 db41ce50c48e4dee637af9cc53c0e3ba 268 Pfam PF13672 Protein phosphatase 2C 17 213 1.3E-16 T 15-10-2018 THII_3038 db41ce50c48e4dee637af9cc53c0e3ba 268 Gene3D G3DSA:3.60.40.10 1 251 1.9E-69 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3038 db41ce50c48e4dee637af9cc53c0e3ba 268 SMART SM00331 9 251 1.6E-35 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3038 db41ce50c48e4dee637af9cc53c0e3ba 268 SUPERFAMILY SSF81606 3 250 7.59E-66 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3038 db41ce50c48e4dee637af9cc53c0e3ba 268 SMART SM00332 1 249 2.3E-23 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_2330 0aa1ce5939dfc4f27bbacac164479359 447 Pfam PF13175 AAA ATPase domain 2 363 1.5E-21 T 15-10-2018 THII_2330 0aa1ce5939dfc4f27bbacac164479359 447 SUPERFAMILY SSF52540 3 373 5.13E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1482 633224a74dc430b0a1fb2ac27ec7b5a4 341 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 23 337 1.0E-52 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 THII_1482 633224a74dc430b0a1fb2ac27ec7b5a4 341 Gene3D G3DSA:2.40.420.20 25 324 1.4E-47 T 15-10-2018 THII_1482 633224a74dc430b0a1fb2ac27ec7b5a4 341 Gene3D G3DSA:2.40.30.170 35 265 1.4E-47 T 15-10-2018 THII_1482 633224a74dc430b0a1fb2ac27ec7b5a4 341 Gene3D G3DSA:2.40.50.100 47 187 1.4E-47 T 15-10-2018 THII_1482 633224a74dc430b0a1fb2ac27ec7b5a4 341 Gene3D G3DSA:1.10.287.470 81 152 1.4E-47 T 15-10-2018 THII_1482 633224a74dc430b0a1fb2ac27ec7b5a4 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 252 9.5E-16 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THII_1482 633224a74dc430b0a1fb2ac27ec7b5a4 341 SUPERFAMILY SSF111369 36 254 4.18E-22 T 15-10-2018 THII_0101 570aac2c487110a07509bfc5bc9042b3 221 SMART SM00986 52 211 1.5E-29 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_0101 570aac2c487110a07509bfc5bc9042b3 221 SMART SM00987 52 211 1.5E-29 T 15-10-2018 THII_0101 570aac2c487110a07509bfc5bc9042b3 221 SUPERFAMILY SSF52141 6 221 1.5E-90 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_0101 570aac2c487110a07509bfc5bc9042b3 221 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 8 221 37.858 T 15-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_0101 570aac2c487110a07509bfc5bc9042b3 221 Gene3D G3DSA:3.40.470.10 1 221 9.1E-100 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_0101 570aac2c487110a07509bfc5bc9042b3 221 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 60 69 - T 15-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_0101 570aac2c487110a07509bfc5bc9042b3 221 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 9 215 7.2E-86 T 15-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_0101 570aac2c487110a07509bfc5bc9042b3 221 Pfam PF03167 Uracil DNA glycosylase superfamily 57 210 6.6E-27 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_3489 b457c2d93c9a7c549bc9e7b507dc15a9 360 Gene3D G3DSA:3.40.50.2000 168 313 1.4E-32 T 15-10-2018 THII_3489 b457c2d93c9a7c549bc9e7b507dc15a9 360 SUPERFAMILY SSF53756 6 360 2.2E-62 T 15-10-2018 THII_3489 b457c2d93c9a7c549bc9e7b507dc15a9 360 Gene3D G3DSA:3.40.50.2000 1 155 2.1E-26 T 15-10-2018 THII_3489 b457c2d93c9a7c549bc9e7b507dc15a9 360 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 122 294 2.1E-26 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 THII_1927 a32acc9c7d101b0061c130090d355682 225 Gene3D G3DSA:2.30.30.40 79 211 1.3E-14 T 15-10-2018 THII_1927 a32acc9c7d101b0061c130090d355682 225 Gene3D G3DSA:2.40.50.180 96 212 1.3E-14 T 15-10-2018 THII_1927 a32acc9c7d101b0061c130090d355682 225 Pfam PF01584 CheW-like domain 78 219 1.3E-20 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1927 a32acc9c7d101b0061c130090d355682 225 SMART SM00260 68 217 4.0E-4 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1927 a32acc9c7d101b0061c130090d355682 225 SUPERFAMILY SSF50341 73 219 1.11E-21 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_1563 de56a4aa970663dd4730d199a2f82ddb 165 SUPERFAMILY SSF55083 3 157 9.02E-52 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 THII_1563 de56a4aa970663dd4730d199a2f82ddb 165 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 90 101 - T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 THII_1563 de56a4aa970663dd4730d199a2f82ddb 165 Gene3D G3DSA:3.30.70.560 3 160 1.0E-51 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 THII_1563 de56a4aa970663dd4730d199a2f82ddb 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 135 1.7E-35 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 THII_1563 de56a4aa970663dd4730d199a2f82ddb 165 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 135 4.6E-40 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 THII_1538 575237f5576435b90afd95f85fe73d70 129 Pfam PF03625 Domain of unknown function DUF302 34 97 1.6E-22 T 15-10-2018 IPR005180 Domain of unknown function DUF302 THII_1538 575237f5576435b90afd95f85fe73d70 129 PIRSF PIRSF021774 1 129 5.3E-38 T 15-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 THII_1538 575237f5576435b90afd95f85fe73d70 129 SUPERFAMILY SSF103247 1 125 1.26E-34 T 15-10-2018 IPR035923 TT1751-like domain superfamily THII_1538 575237f5576435b90afd95f85fe73d70 129 Gene3D G3DSA:3.30.310.70 2 127 3.7E-40 T 15-10-2018 IPR035923 TT1751-like domain superfamily THII_0032 2b484a6e059140ee139a7c1dddda5d07 443 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 426 2.5E-119 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 THII_0032 2b484a6e059140ee139a7c1dddda5d07 443 Gene3D G3DSA:3.65.10.10 20 426 2.1E-157 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 THII_0032 2b484a6e059140ee139a7c1dddda5d07 443 ProSitePatterns PS00885 EPSP synthase signature 2. 347 365 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 THII_0032 2b484a6e059140ee139a7c1dddda5d07 443 SUPERFAMILY SSF55205 10 433 1.8E-128 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 THII_0032 2b484a6e059140ee139a7c1dddda5d07 443 Gene3D G3DSA:3.65.10.10 28 237 2.1E-157 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 THII_0032 2b484a6e059140ee139a7c1dddda5d07 443 PIRSF PIRSF000505 6 439 1.2E-118 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 THII_0032 2b484a6e059140ee139a7c1dddda5d07 443 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 16 435 32.827 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 THII_0032 2b484a6e059140ee139a7c1dddda5d07 443 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 20 432 4.3E-127 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 THII_0032 2b484a6e059140ee139a7c1dddda5d07 443 ProSitePatterns PS00104 EPSP synthase signature 1. 95 109 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 THII_2681 b1881c19926ede2d6dca0b5cf027d835 142 Pfam PF09828 Chromate resistance exported protein 3 136 1.4E-50 T 15-10-2018 IPR018634 Chromate resistance exported protein THII_3344 b8c7609a3e18eef8504d23c32de282e6 261 Pfam PF01435 Peptidase family M48 59 239 4.0E-38 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 THII_3344 b8c7609a3e18eef8504d23c32de282e6 261 Gene3D G3DSA:3.30.2010.10 46 136 9.3E-6 T 15-10-2018 THII_3240 3124898e7ec3c81f16f0416b228634da 2805 SUPERFAMILY SSF48208 2276 2800 7.29E-95 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 THII_3240 3124898e7ec3c81f16f0416b228634da 2805 Gene3D G3DSA:1.50.10.10 2310 2722 3.2E-196 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 THII_3240 3124898e7ec3c81f16f0416b228634da 2805 Gene3D G3DSA:1.50.10.140 1278 1480 1.2E-8 T 15-10-2018 THII_3240 3124898e7ec3c81f16f0416b228634da 2805 Gene3D G3DSA:2.70.98.40 2005 2302 8.3E-95 T 15-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily THII_3240 3124898e7ec3c81f16f0416b228634da 2805 Gene3D G3DSA:2.70.98.40 1507 1805 1.4E-93 T 15-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily THII_3240 3124898e7ec3c81f16f0416b228634da 2805 Gene3D G3DSA:1.50.10.140 925 1069 4.9E-19 T 15-10-2018 THII_3240 3124898e7ec3c81f16f0416b228634da 2805 SUPERFAMILY SSF74650 1506 1774 1.88E-83 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 THII_3240 3124898e7ec3c81f16f0416b228634da 2805 SMART SM01068 1497 1557 6.5E-24 T 15-10-2018 IPR009342 Putative carbohydrate binding domain THII_3240 3124898e7ec3c81f16f0416b228634da 2805 SMART SM01068 2003 2068 1.2E-31 T 15-10-2018 IPR009342 Putative carbohydrate binding domain THII_3240 3124898e7ec3c81f16f0416b228634da 2805 SUPERFAMILY SSF74650 2003 2267 3.04E-85 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 THII_3240 3124898e7ec3c81f16f0416b228634da 2805 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2296 2722 1.1E-122 T 15-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain THII_3240 3124898e7ec3c81f16f0416b228634da 2805 Gene3D G3DSA:2.60.420.10 2306 2777 3.2E-196 T 15-10-2018 THII_3240 3124898e7ec3c81f16f0416b228634da 2805 Pfam PF10091 Putative glucoamylase 1273 1454 1.6E-15 T 15-10-2018 IPR019282 Domain of unknown function DUF2329 THII_3240 3124898e7ec3c81f16f0416b228634da 2805 Pfam PF06165 Glycosyltransferase family 36 1518 1771 5.6E-82 T 15-10-2018 IPR010383 Glycosyl hydrolase 94 THII_3240 3124898e7ec3c81f16f0416b228634da 2805 Pfam PF06165 Glycosyltransferase family 36 2026 2265 1.1E-76 T 15-10-2018 IPR010383 Glycosyl hydrolase 94 THII_3778 f498bf38e33f84f7ff69f7c09b8e8e6d 715 PRINTS PR00723 Subtilisin serine protease family (S8) signature 189 208 6.8E-15 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_3778 f498bf38e33f84f7ff69f7c09b8e8e6d 715 PRINTS PR00723 Subtilisin serine protease family (S8) signature 440 456 6.8E-15 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_3778 f498bf38e33f84f7ff69f7c09b8e8e6d 715 PRINTS PR00723 Subtilisin serine protease family (S8) signature 251 264 6.8E-15 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related THII_3778 f498bf38e33f84f7ff69f7c09b8e8e6d 715 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 441 451 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site THII_3778 f498bf38e33f84f7ff69f7c09b8e8e6d 715 Gene3D G3DSA:3.40.50.200 170 492 1.8E-66 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_3778 f498bf38e33f84f7ff69f7c09b8e8e6d 715 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 194 205 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site THII_3778 f498bf38e33f84f7ff69f7c09b8e8e6d 715 SUPERFAMILY SSF52743 173 484 1.7E-59 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 THII_3778 f498bf38e33f84f7ff69f7c09b8e8e6d 715 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 255 265 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site THII_3778 f498bf38e33f84f7ff69f7c09b8e8e6d 715 Pfam PF00082 Subtilase family 189 482 1.3E-33 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 THII_0233 1b019619abf37c66c18c02b7b120438b 431 SUPERFAMILY SSF51971 22 387 3.53E-37 T 15-10-2018 THII_0233 1b019619abf37c66c18c02b7b120438b 431 Gene3D G3DSA:3.50.50.60 29 388 1.3E-66 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0233 1b019619abf37c66c18c02b7b120438b 431 Gene3D G3DSA:3.30.9.10 119 348 1.3E-66 T 15-10-2018 THII_0233 1b019619abf37c66c18c02b7b120438b 431 Pfam PF01266 FAD dependent oxidoreductase 27 388 2.2E-56 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 THII_3300 2d7fb57261a26f5b020d7ec7e83950d3 401 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 400 5.9E-143 T 15-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 THII_3300 2d7fb57261a26f5b020d7ec7e83950d3 401 Gene3D G3DSA:1.20.81.30 253 363 1.8E-28 T 15-10-2018 THII_3300 2d7fb57261a26f5b020d7ec7e83950d3 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 63 75 1.0E-32 T 15-10-2018 IPR003004 GspF/PilC family THII_3300 2d7fb57261a26f5b020d7ec7e83950d3 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 162 190 1.0E-32 T 15-10-2018 IPR003004 GspF/PilC family THII_3300 2d7fb57261a26f5b020d7ec7e83950d3 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 381 400 1.0E-32 T 15-10-2018 IPR003004 GspF/PilC family THII_3300 2d7fb57261a26f5b020d7ec7e83950d3 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 365 379 1.0E-32 T 15-10-2018 IPR003004 GspF/PilC family THII_3300 2d7fb57261a26f5b020d7ec7e83950d3 401 Pfam PF00482 Type II secretion system (T2SS), protein F 68 190 8.1E-27 T 15-10-2018 IPR018076 Type II secretion system F domain THII_3300 2d7fb57261a26f5b020d7ec7e83950d3 401 Pfam PF00482 Type II secretion system (T2SS), protein F 270 392 6.3E-30 T 15-10-2018 IPR018076 Type II secretion system F domain THII_3300 2d7fb57261a26f5b020d7ec7e83950d3 401 Gene3D G3DSA:1.20.81.30 55 167 3.7E-24 T 15-10-2018 THII_0256 75c5985c1de2dfae5bf5133bb934afea 864 Pfam PF11897 Protein of unknown function (DUF3417) 14 122 3.5E-29 T 15-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 THII_0256 75c5985c1de2dfae5bf5133bb934afea 864 Gene3D G3DSA:3.40.50.2000 117 178 2.2E-9 T 15-10-2018 THII_0256 75c5985c1de2dfae5bf5133bb934afea 864 Gene3D G3DSA:3.40.50.2000 268 420 4.0E-11 T 15-10-2018 THII_0256 75c5985c1de2dfae5bf5133bb934afea 864 SUPERFAMILY SSF53756 11 746 6.22E-185 T 15-10-2018 THII_0256 75c5985c1de2dfae5bf5133bb934afea 864 Gene3D G3DSA:3.40.50.2000 421 723 1.4E-35 T 15-10-2018 THII_0256 75c5985c1de2dfae5bf5133bb934afea 864 PIRSF PIRSF000460 2 795 4.4E-233 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 THII_0256 75c5985c1de2dfae5bf5133bb934afea 864 Pfam PF00343 Carbohydrate phosphorylase 273 624 1.5E-17 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 THII_0256 75c5985c1de2dfae5bf5133bb934afea 864 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 109 712 2.1E-233 T 15-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 THII_0104 54070b3748e7982741f730c3121b74a6 306 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 6.2E-135 T 15-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 THII_0104 54070b3748e7982741f730c3121b74a6 306 Gene3D G3DSA:3.20.10.10 130 295 2.0E-54 T 15-10-2018 THII_0104 54070b3748e7982741f730c3121b74a6 306 Gene3D G3DSA:3.30.470.10 2 129 1.9E-41 T 15-10-2018 THII_0104 54070b3748e7982741f730c3121b74a6 306 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 15-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 THII_0104 54070b3748e7982741f730c3121b74a6 306 SUPERFAMILY SSF56752 2 303 1.96E-102 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 THII_0104 54070b3748e7982741f730c3121b74a6 306 Pfam PF01063 Amino-transferase class IV 36 266 1.2E-52 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 THII_2094 8e48fc68d3fb75207625d9ac659a2fb5 268 Pfam PF05685 Putative restriction endonuclease 22 200 2.8E-22 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0402 90e9fe34635ce4b28063f31d1b942363 210 Pfam PF03080 Neprosin 5 201 2.9E-58 T 15-10-2018 IPR004314 Neprosin THII_1412 1ecfa634f96e0b8afa8319caed0df5c0 154 Gene3D G3DSA:1.10.10.10 7 52 3.9E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1412 1ecfa634f96e0b8afa8319caed0df5c0 154 Gene3D G3DSA:1.10.10.10 101 151 8.6E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1412 1ecfa634f96e0b8afa8319caed0df5c0 154 Pfam PF02631 RecX family 31 148 2.5E-33 T 15-10-2018 IPR003783 Regulatory protein RecX GO:0006282 THII_1412 1ecfa634f96e0b8afa8319caed0df5c0 154 Hamap MF_01114 Regulatory protein RecX [recX]. 2 153 14.438 T 15-10-2018 IPR003783 Regulatory protein RecX GO:0006282 THII_1412 1ecfa634f96e0b8afa8319caed0df5c0 154 Gene3D G3DSA:1.10.10.10 56 97 1.1E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0308 8b6eac7dd54351d9a716f1bf104c233c 91 PIRSF PIRSF002144 1 91 4.7E-32 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0308 8b6eac7dd54351d9a716f1bf104c233c 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.319 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0308 8b6eac7dd54351d9a716f1bf104c233c 91 SUPERFAMILY SSF54570 3 84 1.07E-34 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0308 8b6eac7dd54351d9a716f1bf104c233c 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 5.3E-44 T 15-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 THII_0308 8b6eac7dd54351d9a716f1bf104c233c 91 Gene3D G3DSA:3.30.860.10 1 91 5.3E-41 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0308 8b6eac7dd54351d9a716f1bf104c233c 91 Pfam PF00203 Ribosomal protein S19 3 83 1.7E-35 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0308 8b6eac7dd54351d9a716f1bf104c233c 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.7E-22 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0308 8b6eac7dd54351d9a716f1bf104c233c 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.7E-22 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0308 8b6eac7dd54351d9a716f1bf104c233c 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.7E-22 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0308 8b6eac7dd54351d9a716f1bf104c233c 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 15-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_2420 ce0b0b2723ec6a23c3c9c5621ab7ac72 90 Gene3D G3DSA:3.30.2310.20 1 87 9.9E-34 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2420 ce0b0b2723ec6a23c3c9c5621ab7ac72 90 SUPERFAMILY SSF143011 4 86 3.14E-23 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2420 ce0b0b2723ec6a23c3c9c5621ab7ac72 90 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 6 87 1.4E-31 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_2420 ce0b0b2723ec6a23c3c9c5621ab7ac72 90 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 7 87 1.2E-30 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_0537 14128566486f406816ce075b52ab2a62 376 Gene3D G3DSA:3.90.1150.10 13 367 8.5E-104 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_0537 14128566486f406816ce075b52ab2a62 376 SUPERFAMILY SSF53383 7 373 3.42E-81 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_0537 14128566486f406816ce075b52ab2a62 376 Gene3D G3DSA:3.40.640.10 27 285 8.5E-104 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_0537 14128566486f406816ce075b52ab2a62 376 Pfam PF00266 Aminotransferase class-V 16 350 3.3E-61 T 15-10-2018 IPR000192 Aminotransferase class V domain THII_0717 0fd4784f256b4e0a0e8f07fc90bbd59f 1103 Gene3D G3DSA:3.90.550.10 817 1054 5.4E-48 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0717 0fd4784f256b4e0a0e8f07fc90bbd59f 1103 Gene3D G3DSA:3.40.50.300 2 243 1.1E-12 T 15-10-2018 THII_0717 0fd4784f256b4e0a0e8f07fc90bbd59f 1103 SUPERFAMILY SSF53448 562 773 4.78E-47 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0717 0fd4784f256b4e0a0e8f07fc90bbd59f 1103 Pfam PF13469 Sulfotransferase family 3 189 9.1E-8 T 15-10-2018 THII_0717 0fd4784f256b4e0a0e8f07fc90bbd59f 1103 Pfam PF00535 Glycosyl transferase family 2 565 724 1.7E-24 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0717 0fd4784f256b4e0a0e8f07fc90bbd59f 1103 Pfam PF00535 Glycosyl transferase family 2 826 1000 7.5E-23 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0717 0fd4784f256b4e0a0e8f07fc90bbd59f 1103 Gene3D G3DSA:3.90.550.10 488 809 6.3E-64 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0717 0fd4784f256b4e0a0e8f07fc90bbd59f 1103 SUPERFAMILY SSF53448 809 1075 2.06E-50 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0717 0fd4784f256b4e0a0e8f07fc90bbd59f 1103 SUPERFAMILY SSF52540 2 208 2.91E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0930 3d9e7bcc50b94bc868670d54090fe777 688 Gene3D G3DSA:2.60.40.10 459 549 5.7E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0930 3d9e7bcc50b94bc868670d54090fe777 688 SMART SM00089 375 460 0.0013 T 15-10-2018 IPR022409 PKD/Chitinase domain THII_0930 3d9e7bcc50b94bc868670d54090fe777 688 SMART SM00089 465 549 7.1E-7 T 15-10-2018 IPR022409 PKD/Chitinase domain THII_0930 3d9e7bcc50b94bc868670d54090fe777 688 Gene3D G3DSA:2.60.40.10 367 458 3.0E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0930 3d9e7bcc50b94bc868670d54090fe777 688 SUPERFAMILY SSF64182 13 316 2.75E-9 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily THII_0930 3d9e7bcc50b94bc868670d54090fe777 688 SUPERFAMILY SSF49299 376 458 2.09E-8 T 15-10-2018 IPR035986 PKD domain superfamily THII_0930 3d9e7bcc50b94bc868670d54090fe777 688 SUPERFAMILY SSF49299 462 548 1.7E-13 T 15-10-2018 IPR035986 PKD domain superfamily THII_2853 ac5cd3b2faa73c5fb98e570acec87436 146 SUPERFAMILY SSF52980 1 146 6.97E-14 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2853 ac5cd3b2faa73c5fb98e570acec87436 146 Gene3D G3DSA:3.90.1570.10 1 146 2.5E-10 T 15-10-2018 THII_2853 ac5cd3b2faa73c5fb98e570acec87436 146 Pfam PF05685 Putative restriction endonuclease 1 136 1.9E-24 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0799 96acc459ff98ba846fade93ede857a7e 425 Pfam PF10531 SLBB domain 201 249 4.3E-10 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0799 96acc459ff98ba846fade93ede857a7e 425 Pfam PF10531 SLBB domain 349 395 1.7E-10 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0799 96acc459ff98ba846fade93ede857a7e 425 Pfam PF10531 SLBB domain 276 319 7.3E-12 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0799 96acc459ff98ba846fade93ede857a7e 425 Pfam PF02563 Polysaccharide biosynthesis/export protein 124 196 4.7E-17 T 15-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 THII_0799 96acc459ff98ba846fade93ede857a7e 425 Gene3D G3DSA:3.10.560.10 347 422 1.1E-13 T 15-10-2018 THII_0799 96acc459ff98ba846fade93ede857a7e 425 Gene3D G3DSA:3.10.560.10 272 346 9.6E-14 T 15-10-2018 THII_0799 96acc459ff98ba846fade93ede857a7e 425 Gene3D G3DSA:3.10.560.10 187 271 2.3E-14 T 15-10-2018 THII_3051 1bf0dfb306bfe5d1be2ea13c61ddd5b2 1003 SUPERFAMILY SSF53335 486 698 4.58E-35 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3051 1bf0dfb306bfe5d1be2ea13c61ddd5b2 1003 Pfam PF01564 Spermine/spermidine synthase domain 536 685 1.3E-18 T 15-10-2018 THII_3051 1bf0dfb306bfe5d1be2ea13c61ddd5b2 1003 Gene3D G3DSA:3.40.50.150 533 729 4.6E-36 T 15-10-2018 THII_3051 1bf0dfb306bfe5d1be2ea13c61ddd5b2 1003 Gene3D G3DSA:1.20.1250.20 122 355 9.0E-6 T 15-10-2018 THII_3051 1bf0dfb306bfe5d1be2ea13c61ddd5b2 1003 SUPERFAMILY SSF103473 13 329 9.59E-8 T 15-10-2018 IPR036259 MFS transporter superfamily THII_3507 6ec8dee61901ad3e51109d31b8c5956c 1941 SUPERFAMILY SSF50985 133 442 2.62E-12 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_3507 6ec8dee61901ad3e51109d31b8c5956c 1941 Gene3D G3DSA:2.130.10.30 73 372 1.2E-13 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_3507 6ec8dee61901ad3e51109d31b8c5956c 1941 Gene3D G3DSA:2.60.40.10 964 1073 1.7E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0867 d170a1f04dce0c42cb1e3c2f17a24033 76 SUPERFAMILY SSF52833 2 76 3.29E-19 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_0867 d170a1f04dce0c42cb1e3c2f17a24033 76 Pfam PF13192 Thioredoxin domain 3 76 1.5E-26 T 15-10-2018 IPR012336 Thioredoxin-like fold THII_0867 d170a1f04dce0c42cb1e3c2f17a24033 76 PIRSF PIRSF037031 1 76 1.7E-29 T 15-10-2018 IPR005243 Redox-active disulphide protein 2 THII_0867 d170a1f04dce0c42cb1e3c2f17a24033 76 Gene3D G3DSA:3.40.30.10 1 76 2.1E-28 T 15-10-2018 THII_2152 a7a113e8a6a1f64705b0084f76529ac7 426 Gene3D G3DSA:3.40.50.2000 234 405 2.2E-94 T 15-10-2018 THII_2152 a7a113e8a6a1f64705b0084f76529ac7 426 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 134 1.2E-10 T 15-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 THII_2152 a7a113e8a6a1f64705b0084f76529ac7 426 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 260 406 9.8E-10 T 15-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 THII_2152 a7a113e8a6a1f64705b0084f76529ac7 426 Gene3D G3DSA:3.40.50.2000 4 233 2.2E-94 T 15-10-2018 THII_2152 a7a113e8a6a1f64705b0084f76529ac7 426 SUPERFAMILY SSF53756 1 422 2.34E-78 T 15-10-2018 THII_3879 5e6e4bf45003f73837a4b5f958327588 118 Pfam PF00886 Ribosomal protein S16 8 69 2.6E-23 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3879 5e6e4bf45003f73837a4b5f958327588 118 Gene3D G3DSA:3.30.1320.10 1 104 2.0E-30 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3879 5e6e4bf45003f73837a4b5f958327588 118 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 4.5E-28 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3879 5e6e4bf45003f73837a4b5f958327588 118 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 79 23.914 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3879 5e6e4bf45003f73837a4b5f958327588 118 SUPERFAMILY SSF54565 1 81 7.85E-28 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3879 5e6e4bf45003f73837a4b5f958327588 118 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 15-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_1536 2816380f16486186c47c7cf5fe7aa276 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 15-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 THII_1536 2816380f16486186c47c7cf5fe7aa276 128 Gene3D G3DSA:3.30.1330.40 1 127 4.1E-51 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 THII_1536 2816380f16486186c47c7cf5fe7aa276 128 SUPERFAMILY SSF55298 1 127 1.88E-46 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 THII_1536 2816380f16486186c47c7cf5fe7aa276 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 125 7.8E-51 T 15-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 THII_1536 2816380f16486186c47c7cf5fe7aa276 128 Pfam PF01042 Endoribonuclease L-PSP 10 125 6.7E-42 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 THII_0984 fbc5ac479d014f5518075f6fa3e7a308 155 SUPERFAMILY SSF75169 4 153 1.09E-18 T 15-10-2018 IPR027396 DsrEFH-like THII_0984 fbc5ac479d014f5518075f6fa3e7a308 155 Gene3D G3DSA:3.40.1260.10 1 155 3.5E-40 T 15-10-2018 IPR027396 DsrEFH-like THII_0984 fbc5ac479d014f5518075f6fa3e7a308 155 Pfam PF13686 DsrE/DsrF/DrsH-like family 3 153 1.2E-54 T 15-10-2018 IPR032836 DsrE2-like family THII_0952 5286894c648c5430d080f27d7d710c65 322 Gene3D G3DSA:3.40.50.720 125 247 7.1E-80 T 15-10-2018 THII_0952 5286894c648c5430d080f27d7d710c65 322 SUPERFAMILY SSF53223 9 110 2.88E-28 T 15-10-2018 THII_0952 5286894c648c5430d080f27d7d710c65 322 Gene3D G3DSA:3.40.50.10860 13 268 7.1E-80 T 15-10-2018 THII_0952 5286894c648c5430d080f27d7d710c65 322 Pfam PF07896 Protein of unknown function (DUF1674) 293 322 3.2E-14 T 15-10-2018 IPR012875 Protein of unknown function DUF1674 THII_0952 5286894c648c5430d080f27d7d710c65 322 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 11 281 1.6E-83 T 15-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 THII_0952 5286894c648c5430d080f27d7d710c65 322 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 13 97 4.3E-24 T 15-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 THII_0952 5286894c648c5430d080f27d7d710c65 322 SUPERFAMILY SSF51735 111 279 1.08E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0952 5286894c648c5430d080f27d7d710c65 322 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 122 202 8.6E-9 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase THII_0952 5286894c648c5430d080f27d7d710c65 322 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 8 280 31.567 T 15-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 THII_2776 18efbbe6846ca524221662769a09da0c 135 Gene3D G3DSA:3.20.20.70 1 135 3.1E-43 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2776 18efbbe6846ca524221662769a09da0c 135 SUPERFAMILY SSF102114 1 130 1.22E-15 T 15-10-2018 THII_1297 14fc9752a23e01e3b36d4cf41cef365a 394 Gene3D G3DSA:3.90.1150.10 262 394 9.3E-53 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_1297 14fc9752a23e01e3b36d4cf41cef365a 394 Gene3D G3DSA:3.40.640.10 6 258 7.7E-89 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_1297 14fc9752a23e01e3b36d4cf41cef365a 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 392 2.0E-143 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 THII_1297 14fc9752a23e01e3b36d4cf41cef365a 394 PIRSF PIRSF001434 1 394 2.2E-134 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 THII_1297 14fc9752a23e01e3b36d4cf41cef365a 394 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 12 393 54.919 T 15-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 THII_1297 14fc9752a23e01e3b36d4cf41cef365a 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 THII_1297 14fc9752a23e01e3b36d4cf41cef365a 394 SUPERFAMILY SSF53383 32 393 1.33E-124 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_1297 14fc9752a23e01e3b36d4cf41cef365a 394 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 12 392 3.7E-176 T 15-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 THII_0060 14635a4c16e303e31e9bb2304a6f2dac 260 Pfam PF13672 Protein phosphatase 2C 15 237 1.3E-7 T 15-10-2018 THII_0060 14635a4c16e303e31e9bb2304a6f2dac 260 SUPERFAMILY SSF81606 3 222 6.54E-6 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3869 92d9382cdb2b302d1b287c78e932d10d 126 SUPERFAMILY SSF50692 1 122 1.49E-44 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily THII_3869 92d9382cdb2b302d1b287c78e932d10d 126 Pfam PF02261 Aspartate decarboxylase 1 114 4.2E-45 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 THII_3869 92d9382cdb2b302d1b287c78e932d10d 126 Gene3D G3DSA:2.40.40.20 1 126 4.4E-49 T 15-10-2018 THII_3869 92d9382cdb2b302d1b287c78e932d10d 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 2 125 2.4E-43 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 THII_3869 92d9382cdb2b302d1b287c78e932d10d 126 PIRSF PIRSF006246 1 125 4.7E-48 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 THII_3869 92d9382cdb2b302d1b287c78e932d10d 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 3.0E-42 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 THII_3869 92d9382cdb2b302d1b287c78e932d10d 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 63.034 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 THII_0316 c4f735f97c561c675f8b38974dcbc5eb 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 6.5E-69 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 THII_0316 c4f735f97c561c675f8b38974dcbc5eb 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 15-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0316 c4f735f97c561c675f8b38974dcbc5eb 156 SUPERFAMILY SSF47973 6 149 4.19E-62 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily THII_0316 c4f735f97c561c675f8b38974dcbc5eb 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.331 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 THII_0316 c4f735f97c561c675f8b38974dcbc5eb 156 PIRSF PIRSF002122 3 156 2.1E-63 T 15-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 THII_0316 c4f735f97c561c675f8b38974dcbc5eb 156 Gene3D G3DSA:1.10.455.10 2 155 3.0E-64 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily THII_0316 c4f735f97c561c675f8b38974dcbc5eb 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.2E-66 T 15-10-2018 IPR023798 Ribosomal protein S7 domain THII_0193 9354a5f5ba7f7c6160aa121ee52df825 168 Gene3D G3DSA:3.90.70.10 11 165 2.3E-17 T 15-10-2018 THII_0193 9354a5f5ba7f7c6160aa121ee52df825 168 Pfam PF13529 Peptidase_C39 like family 5 123 8.1E-10 T 15-10-2018 IPR039564 Peptidase C39-like THII_0911 02a5f561d4dcc6c41de9b6cc0dffa0d3 88 Pfam PF04325 Protein of unknown function (DUF465) 29 74 5.6E-13 T 15-10-2018 IPR007420 Protein of unknown function DUF465 THII_0911 02a5f561d4dcc6c41de9b6cc0dffa0d3 88 Gene3D G3DSA:1.20.58.660 11 86 2.5E-20 T 15-10-2018 THII_2067 42a8246c57eb229937dd39f047c1e946 296 PIRSF PIRSF026649 1 294 1.5E-80 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 THII_2067 42a8246c57eb229937dd39f047c1e946 296 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 285 8.6E-49 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 THII_1550 c5b1a1c8ec2a76d08e09a9f071b96f73 160 Gene3D G3DSA:2.60.40.10 57 139 1.5E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1550 c5b1a1c8ec2a76d08e09a9f071b96f73 160 SUPERFAMILY SSF49373 66 138 1.83E-7 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_1612 a32e15ede48df5fd5b3e183c3e8ad261 429 SUPERFAMILY SSF89260 29 140 1.96E-5 T 15-10-2018 THII_1612 a32e15ede48df5fd5b3e183c3e8ad261 429 Gene3D G3DSA:2.60.120.380 26 152 3.2E-13 T 15-10-2018 THII_1612 a32e15ede48df5fd5b3e183c3e8ad261 429 Gene3D G3DSA:2.60.120.380 155 287 3.5E-14 T 15-10-2018 THII_1612 a32e15ede48df5fd5b3e183c3e8ad261 429 SUPERFAMILY SSF89260 158 257 9.55E-10 T 15-10-2018 THII_0870 edb32e3f85272e817b3f1664a262aca3 218 Pfam PF00692 dUTPase 71 161 2.2E-12 T 15-10-2018 IPR029054 dUTPase-like THII_0870 edb32e3f85272e817b3f1664a262aca3 218 Gene3D G3DSA:2.70.40.10 4 178 2.5E-34 T 15-10-2018 IPR036157 dUTPase-like superfamily THII_0870 edb32e3f85272e817b3f1664a262aca3 218 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 6 167 2.1E-30 T 15-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 THII_0870 edb32e3f85272e817b3f1664a262aca3 218 SUPERFAMILY SSF51283 5 167 1.57E-32 T 15-10-2018 IPR036157 dUTPase-like superfamily THII_1268 5c39ae14ff098de00b73af6696a1dfc9 319 Gene3D G3DSA:3.30.930.10 2 319 3.9E-104 T 15-10-2018 THII_1268 5c39ae14ff098de00b73af6696a1dfc9 319 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 314 7.7E-123 T 15-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 THII_1268 5c39ae14ff098de00b73af6696a1dfc9 319 SUPERFAMILY SSF55681 11 317 1.56E-76 T 15-10-2018 THII_1268 5c39ae14ff098de00b73af6696a1dfc9 319 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 316 8.9E-44 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_1268 5c39ae14ff098de00b73af6696a1dfc9 319 PRINTS PR00982 Lysyl-tRNA synthetase signature 95 112 1.1E-6 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 THII_1268 5c39ae14ff098de00b73af6696a1dfc9 319 PRINTS PR00982 Lysyl-tRNA synthetase signature 30 40 1.1E-6 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 THII_1268 5c39ae14ff098de00b73af6696a1dfc9 319 PRINTS PR00982 Lysyl-tRNA synthetase signature 77 90 1.1E-6 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 THII_2787 3609b43a57c583a0f5fa66bf50f258e3 87 Gene3D G3DSA:3.40.50.1820 6 70 9.6E-8 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_2787 3609b43a57c583a0f5fa66bf50f258e3 87 SUPERFAMILY SSF53474 10 54 3.02E-6 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_2932 251a9ff605d037cdaade1268c3f4f668 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 8.1E-64 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_2932 251a9ff605d037cdaade1268c3f4f668 458 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 3.7E-18 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_2932 251a9ff605d037cdaade1268c3f4f668 458 SUPERFAMILY SSF47917 343 457 4.97E-54 T 15-10-2018 THII_2932 251a9ff605d037cdaade1268c3f4f668 458 Gene3D G3DSA:1.10.1140.10 343 458 2.3E-59 T 15-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_2932 251a9ff605d037cdaade1268c3f4f668 458 SUPERFAMILY SSF52540 75 346 5.99E-91 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2932 251a9ff605d037cdaade1268c3f4f668 458 Gene3D G3DSA:2.40.10.170 1 73 1.1E-28 T 15-10-2018 THII_2932 251a9ff605d037cdaade1268c3f4f668 458 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 457 1.4E-254 T 15-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 THII_2932 251a9ff605d037cdaade1268c3f4f668 458 SMART SM00382 140 324 5.5E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2932 251a9ff605d037cdaade1268c3f4f668 458 Gene3D G3DSA:3.40.50.300 74 342 5.0E-113 T 15-10-2018 THII_2932 251a9ff605d037cdaade1268c3f4f668 458 SUPERFAMILY SSF50615 2 73 1.02E-24 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_2932 251a9ff605d037cdaade1268c3f4f668 458 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 56.867 T 15-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 THII_2932 251a9ff605d037cdaade1268c3f4f668 458 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_2283 21d68924b821d9cb48fee66caa7e8671 94 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 10 90 2.1E-7 T 15-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system THII_3161 b5bc1953f5af7c741e052a027579bba6 736 Pfam PF04453 Organic solvent tolerance protein 290 654 1.9E-90 T 15-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 THII_3161 b5bc1953f5af7c741e052a027579bba6 736 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 6 716 18.936 T 15-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 THII_3388 cc92d42810a6e7dd32d5f4bfc5588246 279 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 8 277 5.9E-91 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 THII_3388 cc92d42810a6e7dd32d5f4bfc5588246 279 SUPERFAMILY SSF53790 6 226 1.96E-80 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 THII_3388 cc92d42810a6e7dd32d5f4bfc5588246 279 Gene3D G3DSA:3.40.1010.10 1 114 5.2E-42 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 THII_3388 cc92d42810a6e7dd32d5f4bfc5588246 279 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 7 228 36.356 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 THII_3388 cc92d42810a6e7dd32d5f4bfc5588246 279 PIRSF PIRSF005917 1 279 5.7E-101 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 THII_3388 cc92d42810a6e7dd32d5f4bfc5588246 279 Gene3D G3DSA:3.30.950.10 115 233 4.5E-43 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 THII_3388 cc92d42810a6e7dd32d5f4bfc5588246 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 206 2.1E-30 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 THII_3388 cc92d42810a6e7dd32d5f4bfc5588246 279 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 85 96 - T 15-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 THII_0971 0209cc907c5eea5d1aeee895034702d4 313 Gene3D G3DSA:3.40.50.300 23 189 7.1E-46 T 15-10-2018 THII_0971 0209cc907c5eea5d1aeee895034702d4 313 SMART SM00382 39 180 2.4E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0971 0209cc907c5eea5d1aeee895034702d4 313 SUPERFAMILY SSF52540 10 285 7.22E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0971 0209cc907c5eea5d1aeee895034702d4 313 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 42 172 2.4E-63 T 15-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 THII_0971 0209cc907c5eea5d1aeee895034702d4 313 PIRSF PIRSF002849 1 313 4.3E-125 T 15-10-2018 THII_0971 0209cc907c5eea5d1aeee895034702d4 313 Gene3D G3DSA:1.10.8.300 201 309 1.3E-29 T 15-10-2018 THII_0440 7d43cd217bf1fa9a1dcdaa2a4993ef8d 456 SUPERFAMILY SSF48452 169 375 1.65E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0440 7d43cd217bf1fa9a1dcdaa2a4993ef8d 456 Gene3D G3DSA:1.25.40.10 146 391 3.5E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0138 7aca58067afac43af07837d06fa9219b 224 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_0138 7aca58067afac43af07837d06fa9219b 224 Pfam PF00005 ABC transporter 24 173 7.1E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_0138 7aca58067afac43af07837d06fa9219b 224 Gene3D G3DSA:3.40.50.300 1 224 6.2E-66 T 15-10-2018 THII_0138 7aca58067afac43af07837d06fa9219b 224 SMART SM00382 33 222 2.4E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0138 7aca58067afac43af07837d06fa9219b 224 SUPERFAMILY SSF52540 4 222 1.36E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3310 014a77100d81e5dfb030f72abc932f24 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.4E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_3310 014a77100d81e5dfb030f72abc932f24 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.4E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_3310 014a77100d81e5dfb030f72abc932f24 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.4E-9 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_3310 014a77100d81e5dfb030f72abc932f24 308 Pfam PF03466 LysR substrate binding domain 89 293 1.2E-42 T 15-10-2018 IPR005119 LysR, substrate-binding THII_3310 014a77100d81e5dfb030f72abc932f24 308 Gene3D G3DSA:1.10.10.10 3 92 2.8E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3310 014a77100d81e5dfb030f72abc932f24 308 Gene3D G3DSA:3.40.190.10 101 288 3.5E-36 T 15-10-2018 THII_3310 014a77100d81e5dfb030f72abc932f24 308 Gene3D G3DSA:3.40.190.10 165 266 3.5E-36 T 15-10-2018 THII_3310 014a77100d81e5dfb030f72abc932f24 308 SUPERFAMILY SSF46785 1 84 2.02E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_3310 014a77100d81e5dfb030f72abc932f24 308 SUPERFAMILY SSF53850 91 298 1.36E-37 T 15-10-2018 THII_3310 014a77100d81e5dfb030f72abc932f24 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.7E-21 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_0151 7d657a22227d1560fac183dac8824edb 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 34.117 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 THII_0151 7d657a22227d1560fac183dac8824edb 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 2.6E-58 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 THII_0151 7d657a22227d1560fac183dac8824edb 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 6.7E-47 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 THII_0151 7d657a22227d1560fac183dac8824edb 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 6.7E-47 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 THII_0151 7d657a22227d1560fac183dac8824edb 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 6.7E-47 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 THII_0151 7d657a22227d1560fac183dac8824edb 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 6.7E-47 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 THII_0151 7d657a22227d1560fac183dac8824edb 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 6.7E-47 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 THII_0151 7d657a22227d1560fac183dac8824edb 159 Pfam PF01467 Cytidylyltransferase-like 6 134 2.5E-19 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 THII_0151 7d657a22227d1560fac183dac8824edb 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 62 4.0E-17 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 THII_0151 7d657a22227d1560fac183dac8824edb 159 Gene3D G3DSA:3.40.50.620 1 159 1.6E-55 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0151 7d657a22227d1560fac183dac8824edb 159 SUPERFAMILY SSF52374 3 156 1.56E-43 T 15-10-2018 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 Pfam PF13855 Leucine rich repeat 181 239 1.5E-11 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 Pfam PF13855 Leucine rich repeat 253 311 4.9E-9 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 Pfam PF13855 Leucine rich repeat 85 143 5.2E-10 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 Pfam PF00560 Leucine Rich Repeat 324 346 1.4 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 PRINTS PR00019 Leucine-rich repeat signature 205 218 8.3E-5 T 15-10-2018 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 PRINTS PR00019 Leucine-rich repeat signature 322 335 8.3E-5 T 15-10-2018 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 Gene3D G3DSA:3.80.10.10 39 198 1.4E-44 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00365 106 127 210.0 T 15-10-2018 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00365 322 348 110.0 T 15-10-2018 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00365 130 151 360.0 T 15-10-2018 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00365 274 300 300.0 T 15-10-2018 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00365 154 180 120.0 T 15-10-2018 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00365 202 228 58.0 T 15-10-2018 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 Gene3D G3DSA:3.80.10.10 204 396 5.0E-54 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SUPERFAMILY SSF52047 81 369 1.65E-64 T 15-10-2018 THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00369 250 273 100.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00369 130 153 17.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00369 226 249 16.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00369 298 321 18.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00369 178 201 18.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00369 274 297 100.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00369 106 129 59.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00369 154 177 270.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00369 346 369 6.2 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00369 322 345 150.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SMART SM00369 202 222 180.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0924 ba01dc1876aa64f7cabed2f7c6a38542 644 SUPERFAMILY SSF50969 423 622 4.55E-17 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like THII_1836 a74f3960bd5d16b7fa3a8c099b7e9f5a 87 Gene3D G3DSA:3.30.2310.20 1 85 4.6E-32 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1836 a74f3960bd5d16b7fa3a8c099b7e9f5a 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 7 85 2.9E-32 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_1836 a74f3960bd5d16b7fa3a8c099b7e9f5a 87 SUPERFAMILY SSF143011 4 84 2.49E-25 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1836 a74f3960bd5d16b7fa3a8c099b7e9f5a 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 7 85 2.3E-31 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_3691 fd8120c7a933c5bceb8fbcf02c7650a0 81 Gene3D G3DSA:1.20.58.720 6 80 4.1E-6 T 15-10-2018 THII_3691 fd8120c7a933c5bceb8fbcf02c7650a0 81 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 10 54 5.6E-11 T 15-10-2018 IPR022453 Zinc finger, MqsA-type THII_1206 49b9a579b5ef7f135432560e608580df 372 SMART SM01204 218 359 6.6E-33 T 15-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 THII_1206 49b9a579b5ef7f135432560e608580df 372 PIRSF PIRSF018953 1 372 1.5E-54 T 15-10-2018 IPR016741 Uncharacterised conserved protein UCP018953 THII_1206 49b9a579b5ef7f135432560e608580df 372 Pfam PF10442 FIST C domain 218 358 7.6E-25 T 15-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 THII_1206 49b9a579b5ef7f135432560e608580df 372 SMART SM00897 31 217 1.5E-19 T 15-10-2018 IPR013702 FIST domain, N-terminal THII_1206 49b9a579b5ef7f135432560e608580df 372 Pfam PF08495 FIST N domain 33 216 7.6E-22 T 15-10-2018 IPR013702 FIST domain, N-terminal THII_1169 a640758bd3be488d3124f4063b267f9d 130 Gene3D G3DSA:3.40.50.1010 1 125 1.9E-18 T 15-10-2018 THII_1169 a640758bd3be488d3124f4063b267f9d 130 SUPERFAMILY SSF88723 3 127 1.68E-19 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_1169 a640758bd3be488d3124f4063b267f9d 130 Pfam PF01850 PIN domain 3 114 5.7E-8 T 15-10-2018 IPR002716 PIN domain THII_2692 dfb87673b9b623e9d954d145bb04529f 500 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 404 2.5E-59 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain THII_2692 dfb87673b9b623e9d954d145bb04529f 500 PIRSF PIRSF002741 21 500 5.4E-81 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 THII_2692 dfb87673b9b623e9d954d145bb04529f 500 Gene3D G3DSA:3.40.190.10 40 482 1.4E-100 T 15-10-2018 THII_2692 dfb87673b9b623e9d954d145bb04529f 500 SUPERFAMILY SSF53850 26 495 1.16E-104 T 15-10-2018 THII_2692 dfb87673b9b623e9d954d145bb04529f 500 Gene3D G3DSA:3.90.76.10 61 171 1.4E-100 T 15-10-2018 THII_2692 dfb87673b9b623e9d954d145bb04529f 500 Gene3D G3DSA:3.10.105.10 257 468 1.4E-100 T 15-10-2018 THII_3097 0e0d7d6cf5689e310f16a7eee2a1bd2d 80 SMART SM01234 2 69 1.1E-41 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor THII_3097 0e0d7d6cf5689e310f16a7eee2a1bd2d 80 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 23.966 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor THII_3097 0e0d7d6cf5689e310f16a7eee2a1bd2d 80 Pfam PF01809 Haemolytic domain 3 69 7.2E-30 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor THII_3097 0e0d7d6cf5689e310f16a7eee2a1bd2d 80 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 7 74 3.1E-27 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor THII_3097 0e0d7d6cf5689e310f16a7eee2a1bd2d 80 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 69 7.0E-17 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 242 256 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Gene3D G3DSA:2.130.10.10 679 749 7.6E-23 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 PRINTS PR00320 G protein beta WD-40 repeat signature 702 716 3.7E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 PRINTS PR00320 G protein beta WD-40 repeat signature 284 298 3.7E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 PRINTS PR00320 G protein beta WD-40 repeat signature 326 340 3.7E-6 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SUPERFAMILY SSF50978 558 886 5.8E-91 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Gene3D G3DSA:2.130.10.10 811 901 2.3E-29 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Gene3D G3DSA:2.130.10.10 432 512 4.3E-31 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Gene3D G3DSA:2.130.10.10 350 431 1.8E-29 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Gene3D G3DSA:2.130.10.10 750 810 2.3E-17 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 284 298 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 618 632 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Gene3D G3DSA:2.130.10.10 135 348 7.0E-49 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 326 340 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Gene3D G3DSA:2.130.10.10 513 678 2.9E-55 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 660 674 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 551 589 0.0011 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 634 673 1.2E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 216 255 1.7E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 383 422 2.1E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 509 548 9.1E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 342 380 2.3E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 676 715 3.2E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 805 844 5.0E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 847 886 2.6E-10 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 425 464 3.7E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 258 297 6.6E-12 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 592 631 1.7E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 300 339 4.8E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 467 506 6.0E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 763 802 3.1E-8 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SMART SM00320 718 760 0.68 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 849 885 2.5E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 355 379 0.049 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 677 714 1.8E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 557 588 2.2E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 301 339 3.0E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 221 254 7.4E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 605 630 0.01 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 426 463 5.0E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 807 843 1.4E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 510 548 1.9E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 260 297 4.5E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 385 421 8.6E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 765 802 1.0E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 636 672 2.5E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 Pfam PF00400 WD domain, G-beta repeat 470 506 2.4E-7 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 702 716 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_0453 19b6930497e6d3d722d73a7a76a5da69 917 SUPERFAMILY SSF50978 218 517 2.38E-94 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_2749 489bbaad33c237d0aa686fb39de97469 693 SMART SM00836 586 689 0.0016 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 THII_2749 489bbaad33c237d0aa686fb39de97469 693 Pfam PF05746 DALR anticodon binding domain 583 681 2.0E-9 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 THII_2749 489bbaad33c237d0aa686fb39de97469 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 247 262 3.5E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2749 489bbaad33c237d0aa686fb39de97469 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 3.5E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2749 489bbaad33c237d0aa686fb39de97469 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 51 63 3.5E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2749 489bbaad33c237d0aa686fb39de97469 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 319 335 3.5E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2749 489bbaad33c237d0aa686fb39de97469 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 395 414 3.5E-37 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2749 489bbaad33c237d0aa686fb39de97469 693 SUPERFAMILY SSF109604 343 491 1.53E-19 T 15-10-2018 THII_2749 489bbaad33c237d0aa686fb39de97469 693 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 552 1.0E-212 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2749 489bbaad33c237d0aa686fb39de97469 693 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 690 1.5E-248 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2749 489bbaad33c237d0aa686fb39de97469 693 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 689 26.11 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 THII_2727 e79eac052194cbbe5a53accaef5827ce 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.2E-26 T 15-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 THII_2727 e79eac052194cbbe5a53accaef5827ce 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.9E-66 T 15-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2727 e79eac052194cbbe5a53accaef5827ce 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.566 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 THII_2727 e79eac052194cbbe5a53accaef5827ce 142 Gene3D G3DSA:3.30.1550.10 2 72 1.9E-34 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily THII_2727 e79eac052194cbbe5a53accaef5827ce 142 SUPERFAMILY SSF46906 68 141 4.71E-28 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily THII_2727 e79eac052194cbbe5a53accaef5827ce 142 SUPERFAMILY SSF54747 3 73 5.49E-30 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily THII_2727 e79eac052194cbbe5a53accaef5827ce 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 15-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_2727 e79eac052194cbbe5a53accaef5827ce 142 SMART SM00649 9 141 2.1E-85 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 THII_2727 e79eac052194cbbe5a53accaef5827ce 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 9.0E-14 T 15-10-2018 THII_2727 e79eac052194cbbe5a53accaef5827ce 142 Gene3D G3DSA:1.10.10.250 73 141 1.9E-29 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily THII_2727 e79eac052194cbbe5a53accaef5827ce 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.6E-28 T 15-10-2018 IPR020784 Ribosomal protein L11, N-terminal THII_3516 70e3db2c04f0d2c883027f7723047d25 162 PIRSF PIRSF018472 1 162 4.3E-53 T 15-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type THII_3516 70e3db2c04f0d2c883027f7723047d25 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 153 5.8E-36 T 15-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 THII_3516 70e3db2c04f0d2c883027f7723047d25 162 Pfam PF04093 rod shape-determining protein MreD 6 153 3.4E-26 T 15-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 THII_2119 bd4e1619127a18e1fa9a834819c3ad62 200 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 182 1.5E-27 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase THII_2119 bd4e1619127a18e1fa9a834819c3ad62 200 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 182 4.9E-35 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase THII_2119 bd4e1619127a18e1fa9a834819c3ad62 200 PIRSF PIRSF006806 1 187 2.1E-35 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase THII_2119 bd4e1619127a18e1fa9a834819c3ad62 200 Gene3D G3DSA:3.40.50.10420 1 197 1.6E-41 T 15-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily THII_2119 bd4e1619127a18e1fa9a834819c3ad62 200 SUPERFAMILY SSF100950 1 186 1.95E-35 T 15-10-2018 IPR037171 NagB/RpiA transferase-like THII_3734 e1deca461576156d88eb502b0463ed4a 1455 SUPERFAMILY SSF55781 503 673 7.36E-20 T 15-10-2018 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 978 996 3.0E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 971 3.0E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1002 1015 3.0E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 943 957 3.0E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 SMART SM00388 779 847 6.4E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 SUPERFAMILY SSF55874 836 1016 6.68E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3734 e1deca461576156d88eb502b0463ed4a 1455 Gene3D G3DSA:3.40.50.12740 1334 1455 1.5E-41 T 15-10-2018 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 Gene3D G3DSA:3.40.50.12740 1068 1324 6.1E-38 T 15-10-2018 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 SMART SM00448 1335 1449 4.5E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 SMART SM00448 1067 1177 1.4E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 Gene3D G3DSA:3.30.450.40 518 694 1.0E-13 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_3734 e1deca461576156d88eb502b0463ed4a 1455 SUPERFAMILY SSF52172 1189 1318 1.71E-10 T 15-10-2018 IPR011006 CheY-like superfamily THII_3734 e1deca461576156d88eb502b0463ed4a 1455 Pfam PF13185 GAF domain 532 673 3.8E-12 T 15-10-2018 IPR003018 GAF domain GO:0005515 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 780 847 3.4E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 Gene3D G3DSA:3.30.565.10 846 1021 3.4E-50 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3734 e1deca461576156d88eb502b0463ed4a 1455 Gene3D G3DSA:1.10.287.130 746 845 8.5E-27 T 15-10-2018 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 SUPERFAMILY SSF52172 1066 1182 7.12E-25 T 15-10-2018 IPR011006 CheY-like superfamily THII_3734 e1deca461576156d88eb502b0463ed4a 1455 SUPERFAMILY SSF52172 1330 1453 3.56E-38 T 15-10-2018 IPR011006 CheY-like superfamily THII_3734 e1deca461576156d88eb502b0463ed4a 1455 SMART SM00387 894 1018 1.3E-38 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3734 e1deca461576156d88eb502b0463ed4a 1455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 895 1017 5.1E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3734 e1deca461576156d88eb502b0463ed4a 1455 SUPERFAMILY SSF47384 765 849 7.46E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 SMART SM01358 43 285 5.1E-9 T 15-10-2018 IPR032255 Helical bimodular sensor domain THII_3734 e1deca461576156d88eb502b0463ed4a 1455 Pfam PF00072 Response regulator receiver domain 1191 1276 5.2E-5 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 Pfam PF00072 Response regulator receiver domain 1070 1177 2.3E-17 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3734 e1deca461576156d88eb502b0463ed4a 1455 Pfam PF00072 Response regulator receiver domain 1337 1448 1.4E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1694 a1fa4771c6bf87b23d2baeeb6cabe74e 189 SUPERFAMILY SSF48695 11 179 2.1E-46 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily THII_1694 a1fa4771c6bf87b23d2baeeb6cabe74e 189 PIRSF PIRSF000013 6 188 2.0E-69 T 15-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 THII_1694 a1fa4771c6bf87b23d2baeeb6cabe74e 189 Gene3D G3DSA:1.10.3820.10 3 186 1.6E-37 T 15-10-2018 IPR038266 NapC/NirT cytochrome c superfamily THII_1694 a1fa4771c6bf87b23d2baeeb6cabe74e 189 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 178 2.5E-65 T 15-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal THII_1253 6eade3af298719d0fc278dace58bf4bb 109 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 2.1E-35 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 THII_1253 6eade3af298719d0fc278dace58bf4bb 109 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 93 3.6E-29 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 THII_1253 6eade3af298719d0fc278dace58bf4bb 109 Gene3D G3DSA:3.30.160.100 1 103 1.4E-39 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like THII_1253 6eade3af298719d0fc278dace58bf4bb 109 SUPERFAMILY SSF69754 2 103 3.4E-38 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like THII_2027 24129f5faaf3e6b497eb399ade78c5c7 167 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 12 157 7.4E-39 T 15-10-2018 IPR011747 Conserved hypothetical protein CHP02241 THII_2027 24129f5faaf3e6b497eb399ade78c5c7 167 Pfam PF06841 T4-like virus tail tube protein gp19 15 156 2.3E-40 T 15-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 THII_3089 f1e0dcb14ed0e55b109e7f5d39d119c9 371 SUPERFAMILY SSF48208 133 276 5.61E-9 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 THII_3089 f1e0dcb14ed0e55b109e7f5d39d119c9 371 Gene3D G3DSA:1.50.10.20 98 305 1.7E-6 T 15-10-2018 THII_0469 c4e80e64f348ba31ad9935db13af9696 705 Gene3D G3DSA:3.30.365.10 309 536 1.3E-65 T 15-10-2018 THII_0469 c4e80e64f348ba31ad9935db13af9696 705 SMART SM01008 207 281 9.9E-8 T 15-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead THII_0469 c4e80e64f348ba31ad9935db13af9696 705 Gene3D G3DSA:3.90.1170.50 179 253 1.5E-7 T 15-10-2018 THII_0469 c4e80e64f348ba31ad9935db13af9696 705 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 37 190 1.7E-16 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 THII_0469 c4e80e64f348ba31ad9935db13af9696 705 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 581 656 7.2E-12 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 THII_0469 c4e80e64f348ba31ad9935db13af9696 705 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 305 544 5.8E-41 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 THII_0469 c4e80e64f348ba31ad9935db13af9696 705 Gene3D G3DSA:3.30.365.10 39 178 1.2E-25 T 15-10-2018 THII_0469 c4e80e64f348ba31ad9935db13af9696 705 PIRSF PIRSF036389 1 705 1.3E-257 T 15-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related THII_0469 c4e80e64f348ba31ad9935db13af9696 705 SUPERFAMILY SSF56003 304 702 7.46E-118 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 THII_0469 c4e80e64f348ba31ad9935db13af9696 705 SUPERFAMILY SSF56003 41 240 6.98E-43 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 THII_0469 c4e80e64f348ba31ad9935db13af9696 705 Gene3D G3DSA:3.30.365.10 333 424 1.3E-65 T 15-10-2018 THII_0469 c4e80e64f348ba31ad9935db13af9696 705 Gene3D G3DSA:3.30.365.10 551 704 8.6E-37 T 15-10-2018 THII_0646 983421e20194d7018dabf31fe80164d6 426 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 23 423 6.4E-108 T 15-10-2018 THII_0646 983421e20194d7018dabf31fe80164d6 426 Gene3D G3DSA:3.20.20.140 58 368 1.6E-118 T 15-10-2018 THII_0646 983421e20194d7018dabf31fe80164d6 426 SUPERFAMILY SSF51338 1 422 6.86E-29 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 THII_0646 983421e20194d7018dabf31fe80164d6 426 Gene3D G3DSA:2.30.40.10 10 421 1.6E-118 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 THII_0646 983421e20194d7018dabf31fe80164d6 426 Pfam PF01979 Amidohydrolase family 53 421 3.2E-21 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 THII_0646 983421e20194d7018dabf31fe80164d6 426 SUPERFAMILY SSF51556 57 367 4.72E-86 T 15-10-2018 IPR032466 Metal-dependent hydrolase THII_0190 f043333e34b29ea8c5be8adae65b6714 618 Gene3D G3DSA:3.40.50.300 123 294 1.2E-20 T 15-10-2018 THII_0190 f043333e34b29ea8c5be8adae65b6714 618 Pfam PF00931 NB-ARC domain 159 425 1.5E-21 T 15-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 THII_0190 f043333e34b29ea8c5be8adae65b6714 618 SMART SM00382 171 306 2.0E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0190 f043333e34b29ea8c5be8adae65b6714 618 Gene3D G3DSA:1.10.8.430 306 391 2.7E-5 T 15-10-2018 THII_0190 f043333e34b29ea8c5be8adae65b6714 618 Gene3D G3DSA:1.25.40.370 474 580 6.3E-15 T 15-10-2018 THII_0190 f043333e34b29ea8c5be8adae65b6714 618 SUPERFAMILY SSF52540 142 398 9.55E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0190 f043333e34b29ea8c5be8adae65b6714 618 Gene3D G3DSA:1.10.10.10 392 473 2.6E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1773 b4f2de8d411c089986d98aef35fcd703 308 SUPERFAMILY SSF52374 17 177 3.94E-36 T 15-10-2018 THII_1773 b4f2de8d411c089986d98aef35fcd703 308 SMART SM00904 183 307 4.6E-54 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 THII_1773 b4f2de8d411c089986d98aef35fcd703 308 Gene3D G3DSA:2.40.30.30 188 308 3.1E-37 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 THII_1773 b4f2de8d411c089986d98aef35fcd703 308 Pfam PF06574 FAD synthetase 12 167 1.5E-56 T 15-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 THII_1773 b4f2de8d411c089986d98aef35fcd703 308 Pfam PF01687 Riboflavin kinase 184 306 1.5E-35 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 THII_1773 b4f2de8d411c089986d98aef35fcd703 308 PIRSF PIRSF004491 1 308 9.8E-105 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 THII_1773 b4f2de8d411c089986d98aef35fcd703 308 Gene3D G3DSA:3.40.50.620 1 186 1.1E-63 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_1773 b4f2de8d411c089986d98aef35fcd703 308 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 306 1.1E-101 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 THII_1773 b4f2de8d411c089986d98aef35fcd703 308 SUPERFAMILY SSF82114 174 306 1.72E-43 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 THII_0863 99df7cd7e042788165e39f3e65765d7b 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 212 1.7E-58 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 THII_0863 99df7cd7e042788165e39f3e65765d7b 218 Gene3D G3DSA:3.40.50.1360 7 209 8.1E-77 T 15-10-2018 THII_0863 99df7cd7e042788165e39f3e65765d7b 218 SUPERFAMILY SSF75445 127 198 2.49E-24 T 15-10-2018 THII_0863 99df7cd7e042788165e39f3e65765d7b 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.702 T 15-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 THII_0863 99df7cd7e042788165e39f3e65765d7b 218 Gene3D G3DSA:3.30.70.260 125 195 8.1E-77 T 15-10-2018 THII_0863 99df7cd7e042788165e39f3e65765d7b 218 SUPERFAMILY SSF100950 4 146 1.2E-44 T 15-10-2018 IPR037171 NagB/RpiA transferase-like THII_0863 99df7cd7e042788165e39f3e65765d7b 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 2.0E-67 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 THII_1152 0ddf12d2396f855e7d8bb3a3646ff422 237 Pfam PF01553 Acyltransferase 60 179 2.6E-16 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 THII_1152 0ddf12d2396f855e7d8bb3a3646ff422 237 SUPERFAMILY SSF69593 6 232 3.01E-34 T 15-10-2018 THII_1152 0ddf12d2396f855e7d8bb3a3646ff422 237 SMART SM00563 72 186 1.6E-24 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 THII_0348 d43bcf263b424468f793b949cb50b1c5 365 Pfam PF03969 AFG1-like ATPase 2 359 2.5E-123 T 15-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 THII_0348 d43bcf263b424468f793b949cb50b1c5 365 Gene3D G3DSA:3.40.50.300 44 205 1.5E-20 T 15-10-2018 THII_0348 d43bcf263b424468f793b949cb50b1c5 365 SUPERFAMILY SSF52540 57 183 7.41E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3227 96e17f577561d2e4b53ce666361c073e 205 SUPERFAMILY SSF48498 88 197 1.84E-7 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily THII_3227 96e17f577561d2e4b53ce666361c073e 205 SUPERFAMILY SSF46689 9 87 4.74E-19 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3227 96e17f577561d2e4b53ce666361c073e 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.6E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 THII_3227 96e17f577561d2e4b53ce666361c073e 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.6E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 THII_3227 96e17f577561d2e4b53ce666361c073e 205 Gene3D G3DSA:1.10.357.10 8 204 5.4E-36 T 15-10-2018 THII_3227 96e17f577561d2e4b53ce666361c073e 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 9.9E-16 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 THII_1938 83877ae9882dbe09d08fe77cbed4a7a2 846 Pfam PF05860 haemagglutination activity domain 48 133 3.4E-24 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_1938 83877ae9882dbe09d08fe77cbed4a7a2 846 SUPERFAMILY SSF51126 478 630 6.91E-8 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_1938 83877ae9882dbe09d08fe77cbed4a7a2 846 SUPERFAMILY SSF51126 335 510 1.73E-10 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_1938 83877ae9882dbe09d08fe77cbed4a7a2 846 Gene3D G3DSA:2.160.20.10 544 733 8.0E-13 T 15-10-2018 IPR012334 Pectin lyase fold THII_1938 83877ae9882dbe09d08fe77cbed4a7a2 846 Gene3D G3DSA:2.160.20.10 43 408 4.5E-52 T 15-10-2018 IPR012334 Pectin lyase fold THII_1938 83877ae9882dbe09d08fe77cbed4a7a2 846 SUPERFAMILY SSF51126 45 373 8.32E-40 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_1938 83877ae9882dbe09d08fe77cbed4a7a2 846 SMART SM00912 32 138 1.9E-11 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_1938 83877ae9882dbe09d08fe77cbed4a7a2 846 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 55 132 6.4E-20 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_1376 7aabff15db859b39d1d412120f4b227f 487 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 335 343 - T 15-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 ProSitePatterns PS00438 Catalase proximal active site signature. 45 61 - T 15-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 PIRSF PIRSF038928 1 481 6.9E-225 T 15-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 Pfam PF00199 Catalase 9 390 1.3E-191 T 15-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 PRINTS PR00067 Catalase signature 106 123 1.4E-72 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 PRINTS PR00067 Catalase signature 85 103 1.4E-72 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 PRINTS PR00067 Catalase signature 22 45 1.4E-72 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 PRINTS PR00067 Catalase signature 290 317 1.4E-72 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 PRINTS PR00067 Catalase signature 125 143 1.4E-72 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 PRINTS PR00067 Catalase signature 322 348 1.4E-72 T 15-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 SMART SM01060 9 393 5.8E-290 T 15-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 Gene3D G3DSA:2.40.180.10 4 487 1.5E-230 T 15-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 THII_1376 7aabff15db859b39d1d412120f4b227f 487 SUPERFAMILY SSF56634 2 484 4.19E-213 T 15-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_1376 7aabff15db859b39d1d412120f4b227f 487 Pfam PF06628 Catalase-related immune-responsive 416 478 3.1E-20 T 15-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 THII_0842 bca32a7cb89e7a0674c7fd2cf6e2ce32 1177 Pfam PF00176 SNF2 family N-terminal domain 725 991 1.5E-62 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 THII_0842 bca32a7cb89e7a0674c7fd2cf6e2ce32 1177 SUPERFAMILY SSF52540 920 1168 6.02E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0842 bca32a7cb89e7a0674c7fd2cf6e2ce32 1177 SMART SM00487 704 888 7.2E-38 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_0842 bca32a7cb89e7a0674c7fd2cf6e2ce32 1177 SMART SM00490 1034 1114 2.4E-23 T 15-10-2018 IPR001650 Helicase, C-terminal THII_0842 bca32a7cb89e7a0674c7fd2cf6e2ce32 1177 Gene3D G3DSA:3.40.50.10810 709 920 5.9E-69 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily THII_0842 bca32a7cb89e7a0674c7fd2cf6e2ce32 1177 SUPERFAMILY SSF52540 677 919 1.38E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0842 bca32a7cb89e7a0674c7fd2cf6e2ce32 1177 Gene3D G3DSA:1.20.120.850 941 1164 1.1E-81 T 15-10-2018 THII_0842 bca32a7cb89e7a0674c7fd2cf6e2ce32 1177 Pfam PF00271 Helicase conserved C-terminal domain 1005 1114 1.9E-18 T 15-10-2018 IPR001650 Helicase, C-terminal THII_0842 bca32a7cb89e7a0674c7fd2cf6e2ce32 1177 Gene3D G3DSA:3.40.50.300 926 1128 1.1E-81 T 15-10-2018 THII_2991 e799a0e46b7fa574e8fc85d3396c576b 244 Pfam PF01841 Transglutaminase-like superfamily 62 163 3.9E-5 T 15-10-2018 IPR002931 Transglutaminase-like THII_2991 e799a0e46b7fa574e8fc85d3396c576b 244 SUPERFAMILY SSF54001 56 166 1.37E-10 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily THII_2991 e799a0e46b7fa574e8fc85d3396c576b 244 Gene3D G3DSA:3.10.620.30 45 175 9.2E-12 T 15-10-2018 THII_0978 87c43efbb465921df5cbc35297d00fd0 712 SMART SM00706 328 366 72.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_0978 87c43efbb465921df5cbc35297d00fd0 712 SMART SM00706 53 91 21.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_0978 87c43efbb465921df5cbc35297d00fd0 712 SMART SM00706 132 170 22.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_0978 87c43efbb465921df5cbc35297d00fd0 712 SMART SM00706 250 288 180.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_0978 87c43efbb465921df5cbc35297d00fd0 712 SMART SM00706 210 249 110.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_0978 87c43efbb465921df5cbc35297d00fd0 712 SMART SM00706 171 209 230.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_0978 87c43efbb465921df5cbc35297d00fd0 712 SMART SM00706 14 52 160.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_0978 87c43efbb465921df5cbc35297d00fd0 712 SUPERFAMILY SSF89372 150 373 5.1E-7 T 15-10-2018 THII_1112 bcaec2b41a00c372debce5ddb3c26edb 479 Pfam PF13847 Methyltransferase domain 51 153 1.8E-17 T 15-10-2018 IPR025714 Methyltransferase domain THII_1112 bcaec2b41a00c372debce5ddb3c26edb 479 SUPERFAMILY SSF53448 244 479 7.29E-47 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1112 bcaec2b41a00c372debce5ddb3c26edb 479 SUPERFAMILY SSF53335 17 204 6.14E-31 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1112 bcaec2b41a00c372debce5ddb3c26edb 479 Gene3D G3DSA:3.40.50.150 27 196 8.8E-30 T 15-10-2018 THII_1112 bcaec2b41a00c372debce5ddb3c26edb 479 Gene3D G3DSA:3.90.550.10 227 474 1.2E-32 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1112 bcaec2b41a00c372debce5ddb3c26edb 479 Pfam PF00535 Glycosyl transferase family 2 245 366 2.1E-17 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_1325 eed705d593723b4b5fb839f949efdbdb 286 Hamap MF_00188 Protease HtpX [htpX]. 1 283 24.28 T 15-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 THII_1325 eed705d593723b4b5fb839f949efdbdb 286 Gene3D G3DSA:3.30.2010.10 62 155 1.5E-33 T 15-10-2018 THII_1325 eed705d593723b4b5fb839f949efdbdb 286 Pfam PF01435 Peptidase family M48 75 282 2.1E-39 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 THII_0428 f13a57745427eba06f98966f806f8b11 247 Pfam PF07788 PD-(D/E)XK nuclease superfamily 167 236 1.8E-26 T 15-10-2018 IPR012431 PD-(D/E)XK nuclease THII_0428 f13a57745427eba06f98966f806f8b11 247 Pfam PF12644 Protein of unknown function (DUF3782) 89 166 1.3E-22 T 15-10-2018 IPR024271 Protein of unknown function DUF3782 THII_0428 f13a57745427eba06f98966f806f8b11 247 SUPERFAMILY SSF52980 38 238 2.52E-6 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0267 c45d9e845092f8781b337d9c53c17629 617 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 283 391 9.1E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0267 c45d9e845092f8781b337d9c53c17629 617 Pfam PF00072 Response regulator receiver domain 11 122 3.0E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0267 c45d9e845092f8781b337d9c53c17629 617 Pfam PF00072 Response regulator receiver domain 422 530 4.8E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0267 c45d9e845092f8781b337d9c53c17629 617 SUPERFAMILY SSF52172 10 158 4.7E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_0267 c45d9e845092f8781b337d9c53c17629 617 Gene3D G3DSA:1.10.287.130 155 235 1.3E-27 T 15-10-2018 THII_0267 c45d9e845092f8781b337d9c53c17629 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 332 1.3E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0267 c45d9e845092f8781b337d9c53c17629 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 370 1.3E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0267 c45d9e845092f8781b337d9c53c17629 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 346 1.3E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0267 c45d9e845092f8781b337d9c53c17629 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 389 1.3E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0267 c45d9e845092f8781b337d9c53c17629 617 SUPERFAMILY SSF52172 419 543 6.4E-34 T 15-10-2018 IPR011006 CheY-like superfamily THII_0267 c45d9e845092f8781b337d9c53c17629 617 Gene3D G3DSA:3.30.565.10 236 394 4.4E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0267 c45d9e845092f8781b337d9c53c17629 617 SMART SM00388 169 235 1.3E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0267 c45d9e845092f8781b337d9c53c17629 617 SMART SM00448 9 122 3.2E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0267 c45d9e845092f8781b337d9c53c17629 617 SMART SM00448 420 533 2.8E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0267 c45d9e845092f8781b337d9c53c17629 617 Pfam PF00512 His Kinase A (phospho-acceptor) domain 169 235 2.4E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0267 c45d9e845092f8781b337d9c53c17629 617 SMART SM00387 282 392 3.5E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0267 c45d9e845092f8781b337d9c53c17629 617 Gene3D G3DSA:3.40.50.2300 7 148 9.0E-35 T 15-10-2018 THII_0267 c45d9e845092f8781b337d9c53c17629 617 SUPERFAMILY SSF55874 224 391 1.7E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0267 c45d9e845092f8781b337d9c53c17629 617 SUPERFAMILY SSF47384 152 236 2.55E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0267 c45d9e845092f8781b337d9c53c17629 617 Gene3D G3DSA:3.40.50.12740 420 584 5.6E-38 T 15-10-2018 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 255 281 3.4E-77 T 15-10-2018 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 3.4E-77 T 15-10-2018 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 3.4E-77 T 15-10-2018 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 3.4E-77 T 15-10-2018 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 187 210 3.4E-77 T 15-10-2018 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 213 230 3.4E-77 T 15-10-2018 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 283 296 3.4E-77 T 15-10-2018 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 231 249 3.4E-77 T 15-10-2018 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 158 182 3.4E-77 T 15-10-2018 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 SUPERFAMILY SSF56770 48 308 7.33E-85 T 15-10-2018 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 226 305 1.8E-32 T 15-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal THII_2459 59e47db6a75483cf6b62664bf61f1694 365 Gene3D G3DSA:4.10.480.10 228 339 4.2E-40 T 15-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily THII_2459 59e47db6a75483cf6b62664bf61f1694 365 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 45 5.0E-5 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_2459 59e47db6a75483cf6b62664bf61f1694 365 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 206 1.7E-31 T 15-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 Gene3D G3DSA:3.40.50.700 46 225 2.1E-64 T 15-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily THII_2459 59e47db6a75483cf6b62664bf61f1694 365 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 6 308 5.3E-130 T 15-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 THII_2459 59e47db6a75483cf6b62664bf61f1694 365 PIRSF PIRSF000310 6 353 3.1E-134 T 15-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 THII_1910 bfca824189b5ded41b563ed126ae332f 103 Pfam PF07883 Cupin domain 34 96 9.2E-12 T 15-10-2018 IPR013096 Cupin 2, conserved barrel THII_1910 bfca824189b5ded41b563ed126ae332f 103 Gene3D G3DSA:2.60.120.10 11 100 1.3E-13 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_1910 bfca824189b5ded41b563ed126ae332f 103 SUPERFAMILY SSF51182 26 99 1.04E-17 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily THII_2429 1aaa17ce0ff15ca0e7d9ac6ffcc172b5 158 Hamap MF_00598 Protein Smg [smg]. 5 158 27.493 T 15-10-2018 IPR007456 Smg THII_2429 1aaa17ce0ff15ca0e7d9ac6ffcc172b5 158 Pfam PF04361 Protein of unknown function (DUF494) 5 158 2.0E-51 T 15-10-2018 IPR007456 Smg THII_1046 7247930eee5ac8331b7bb8de4a9d4c79 171 Gene3D G3DSA:3.40.220.10 1 171 9.2E-70 T 15-10-2018 THII_1046 7247930eee5ac8331b7bb8de4a9d4c79 171 SUPERFAMILY SSF52949 4 167 3.87E-59 T 15-10-2018 THII_1046 7247930eee5ac8331b7bb8de4a9d4c79 171 SMART SM00506 4 133 1.1E-45 T 15-10-2018 IPR002589 Macro domain THII_1046 7247930eee5ac8331b7bb8de4a9d4c79 171 Pfam PF01661 Macro domain 21 133 7.7E-42 T 15-10-2018 IPR002589 Macro domain THII_2301 58eb1a94cf36036487b64f9088e22e4f 325 Pfam PF00535 Glycosyl transferase family 2 9 170 9.7E-35 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_2301 58eb1a94cf36036487b64f9088e22e4f 325 SUPERFAMILY SSF53448 7 264 9.14E-50 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2301 58eb1a94cf36036487b64f9088e22e4f 325 Gene3D G3DSA:3.90.550.10 3 235 1.2E-41 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3438 3c1edd865668b2a2a5b30356bef68cba 150 Gene3D G3DSA:1.25.40.10 4 149 7.8E-40 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3438 3c1edd865668b2a2a5b30356bef68cba 150 SUPERFAMILY SSF81901 19 148 1.57E-34 T 15-10-2018 THII_3438 3c1edd865668b2a2a5b30356bef68cba 150 SMART SM00671 82 117 1.0E-7 T 15-10-2018 IPR006597 Sel1-like repeat THII_3438 3c1edd865668b2a2a5b30356bef68cba 150 SMART SM00671 118 150 0.001 T 15-10-2018 IPR006597 Sel1-like repeat THII_3438 3c1edd865668b2a2a5b30356bef68cba 150 SMART SM00671 46 81 7.8E-9 T 15-10-2018 IPR006597 Sel1-like repeat THII_3438 3c1edd865668b2a2a5b30356bef68cba 150 Pfam PF08238 Sel1 repeat 46 80 8.1E-9 T 15-10-2018 IPR006597 Sel1-like repeat THII_3438 3c1edd865668b2a2a5b30356bef68cba 150 Pfam PF08238 Sel1 repeat 84 116 1.3E-8 T 15-10-2018 IPR006597 Sel1-like repeat THII_3438 3c1edd865668b2a2a5b30356bef68cba 150 Pfam PF08238 Sel1 repeat 120 148 2.7E-5 T 15-10-2018 IPR006597 Sel1-like repeat THII_0520 e83f506a429ce21d60a85457d57b34d3 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 4.8E-184 T 15-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0520 e83f506a429ce21d60a85457d57b34d3 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 49.954 T 15-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0520 e83f506a429ce21d60a85457d57b34d3 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 15-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0520 e83f506a429ce21d60a85457d57b34d3 417 Gene3D G3DSA:1.10.645.20 4 417 2.4E-174 T 15-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0520 e83f506a429ce21d60a85457d57b34d3 417 SUPERFAMILY SSF56762 16 417 9.55E-138 T 15-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0520 e83f506a429ce21d60a85457d57b34d3 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 2.1E-125 T 15-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0179 fc1802e34586316da445007b050d48bd 461 Pfam PF01957 NfeD-like C-terminal, partner-binding 316 451 4.9E-33 T 15-10-2018 IPR002810 NfeD-like, C-terminal domain THII_0179 fc1802e34586316da445007b050d48bd 461 Gene3D G3DSA:3.90.226.10 19 268 5.5E-64 T 15-10-2018 THII_0179 fc1802e34586316da445007b050d48bd 461 Gene3D G3DSA:2.40.50.140 392 461 7.5E-15 T 15-10-2018 THII_0179 fc1802e34586316da445007b050d48bd 461 SUPERFAMILY SSF141322 392 453 4.45E-12 T 15-10-2018 THII_0179 fc1802e34586316da445007b050d48bd 461 SUPERFAMILY SSF52096 11 216 2.14E-30 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_2409 9dbc8e6bcc8c43150dbdf0f3c056caaa 568 Gene3D G3DSA:2.160.20.10 65 430 6.8E-9 T 15-10-2018 IPR012334 Pectin lyase fold THII_2409 9dbc8e6bcc8c43150dbdf0f3c056caaa 568 SUPERFAMILY SSF51126 14 431 4.93E-30 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0153 893bb74eeef0243da79686ef21545f97 426 SMART SM00255 9 178 3.3E-7 T 15-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 THII_0153 893bb74eeef0243da79686ef21545f97 426 SUPERFAMILY SSF52200 4 144 2.09E-19 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_0153 893bb74eeef0243da79686ef21545f97 426 Pfam PF13676 TIR domain 12 122 4.5E-10 T 15-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 THII_0153 893bb74eeef0243da79686ef21545f97 426 Gene3D G3DSA:3.40.50.10140 5 183 2.1E-20 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_2881 3bdee0036b4852d6e14c66be25bad08b 165 Gene3D G3DSA:3.30.70.3460 36 165 2.2E-37 T 15-10-2018 THII_2881 3bdee0036b4852d6e14c66be25bad08b 165 SUPERFAMILY SSF46785 10 74 1.18E-6 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_2881 3bdee0036b4852d6e14c66be25bad08b 165 ProSitePatterns PS00519 AsnC-type HTH domain signature. 32 58 - T 15-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site THII_2881 3bdee0036b4852d6e14c66be25bad08b 165 Pfam PF13404 AsnC-type helix-turn-helix domain 11 54 1.5E-9 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 THII_2881 3bdee0036b4852d6e14c66be25bad08b 165 SMART SM00344 11 125 6.3E-4 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 THII_1596 2b4ecbaeaf25ee72a225f82d14f05f29 125 Pfam PF06155 Protein of unknown function (DUF971) 11 95 2.6E-31 T 15-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 THII_1596 2b4ecbaeaf25ee72a225f82d14f05f29 125 Gene3D G3DSA:3.30.2020.30 2 100 3.9E-29 T 15-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 THII_0830 7af561f714db4534cd42e16fe96a7c42 280 Gene3D G3DSA:3.90.550.10 1 268 1.0E-46 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0830 7af561f714db4534cd42e16fe96a7c42 280 SUPERFAMILY SSF53448 2 274 3.46E-40 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0830 7af561f714db4534cd42e16fe96a7c42 280 Pfam PF00535 Glycosyl transferase family 2 5 153 1.4E-20 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0830 7af561f714db4534cd42e16fe96a7c42 280 Pfam PF02709 N-terminal domain of galactosyltransferase 193 254 9.5E-13 T 15-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 THII_3553 fa8fa0c4a9dec8d2a942acbc4887816f 79 Gene3D G3DSA:2.30.30.90 4 79 7.3E-28 T 15-10-2018 IPR038157 Ferrous iron transporter, core domain THII_3553 fa8fa0c4a9dec8d2a942acbc4887816f 79 SMART SM00899 3 76 2.5E-20 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 THII_3553 fa8fa0c4a9dec8d2a942acbc4887816f 79 Pfam PF04023 FeoA domain 4 75 1.9E-15 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 THII_3553 fa8fa0c4a9dec8d2a942acbc4887816f 79 SUPERFAMILY SSF50037 7 77 2.27E-19 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 Pfam PF00963 Cohesin domain 1240 1328 3.4E-6 T 15-10-2018 IPR002102 Cellulosome anchoring protein, cohesin domain GO:0000272|GO:0030246 THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 SUPERFAMILY SSF49384 1240 1336 4.71E-9 T 15-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 Gene3D G3DSA:2.60.40.10 363 448 1.0E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 Gene3D G3DSA:2.40.10.500 258 362 3.2E-14 T 15-10-2018 THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 Pfam PF01436 NHL repeat 219 245 1.2E-4 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 Pfam PF00801 PKD domain 479 531 1.1E-6 T 15-10-2018 IPR000601 PKD domain THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 SUPERFAMILY SSF63829 51 300 1.18E-24 T 15-10-2018 THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 Gene3D G3DSA:2.120.10.30 20 143 2.7E-24 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 Gene3D G3DSA:2.120.10.30 151 247 2.5E-25 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 SUPERFAMILY SSF49384 559 659 1.52E-8 T 15-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 SUPERFAMILY SSF49384 914 990 6.28E-5 T 15-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 Gene3D G3DSA:2.60.40.680 561 679 4.0E-9 T 15-10-2018 THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 Gene3D G3DSA:2.60.40.680 1235 1353 3.3E-11 T 15-10-2018 THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 Gene3D G3DSA:2.60.40.680 907 993 1.1E-6 T 15-10-2018 THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 SMART SM00089 371 451 1.9 T 15-10-2018 IPR022409 PKD/Chitinase domain THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 SMART SM00089 459 544 2.2E-12 T 15-10-2018 IPR022409 PKD/Chitinase domain THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 SUPERFAMILY SSF49299 455 545 1.57E-18 T 15-10-2018 IPR035986 PKD domain superfamily THII_2544 b9a90f5c5d9c5ce0df6df1de6f979171 1551 Gene3D G3DSA:2.60.40.10 449 542 1.2E-19 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1800 e55e79ad3505d699cbea54d5b70e17dc 318 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 304 6.0E-86 T 15-10-2018 IPR011862 Phosphate binding protein GO:0042301 THII_1800 e55e79ad3505d699cbea54d5b70e17dc 318 Pfam PF12849 PBP superfamily domain 33 290 8.2E-33 T 15-10-2018 IPR024370 PBP domain THII_1800 e55e79ad3505d699cbea54d5b70e17dc 318 Gene3D G3DSA:3.40.190.10 35 306 2.0E-114 T 15-10-2018 THII_1800 e55e79ad3505d699cbea54d5b70e17dc 318 Gene3D G3DSA:3.40.190.10 120 263 2.0E-114 T 15-10-2018 THII_1800 e55e79ad3505d699cbea54d5b70e17dc 318 SUPERFAMILY SSF53850 34 317 8.58E-72 T 15-10-2018 THII_2627 f40c3a7ce9b6f1fa3afeef1f37ccd275 148 Gene3D G3DSA:1.20.1220.20 3 146 1.3E-30 T 15-10-2018 THII_2627 f40c3a7ce9b6f1fa3afeef1f37ccd275 148 Pfam PF01724 Domain of unknown function DUF29 7 143 3.6E-49 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2463 055da0ddd3fed56fc674ce2bb4915d5f 475 SUPERFAMILY SSF50956 140 467 1.7E-83 T 15-10-2018 THII_2463 055da0ddd3fed56fc674ce2bb4915d5f 475 Pfam PF02333 Phytase 131 469 1.7E-107 T 15-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 THII_2463 055da0ddd3fed56fc674ce2bb4915d5f 475 Gene3D G3DSA:2.120.10.30 135 474 3.5E-135 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_1984 72628cd7281e6e8b4be492197107d771 121 Pfam PF00072 Response regulator receiver domain 6 118 2.3E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1984 72628cd7281e6e8b4be492197107d771 121 SUPERFAMILY SSF52172 5 120 1.71E-33 T 15-10-2018 IPR011006 CheY-like superfamily THII_1984 72628cd7281e6e8b4be492197107d771 121 SMART SM00448 4 117 6.0E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1984 72628cd7281e6e8b4be492197107d771 121 Gene3D G3DSA:3.40.50.12740 4 121 9.6E-37 T 15-10-2018 THII_3378 0942f951b74526b0cfd18f4ac1b11154 496 Pfam PF01436 NHL repeat 98 125 4.0E-9 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_3378 0942f951b74526b0cfd18f4ac1b11154 496 Pfam PF01436 NHL repeat 193 220 1.8E-10 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_3378 0942f951b74526b0cfd18f4ac1b11154 496 Pfam PF01436 NHL repeat 288 315 4.1E-8 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_3378 0942f951b74526b0cfd18f4ac1b11154 496 Pfam PF01436 NHL repeat 51 77 1.9E-4 T 15-10-2018 IPR001258 NHL repeat GO:0005515 THII_3378 0942f951b74526b0cfd18f4ac1b11154 496 Gene3D G3DSA:2.120.10.30 26 140 8.3E-34 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_3378 0942f951b74526b0cfd18f4ac1b11154 496 Gene3D G3DSA:2.120.10.30 141 236 4.5E-31 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_3378 0942f951b74526b0cfd18f4ac1b11154 496 Gene3D G3DSA:2.120.10.30 237 388 3.2E-28 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_3378 0942f951b74526b0cfd18f4ac1b11154 496 SUPERFAMILY SSF101898 48 315 2.07E-47 T 15-10-2018 THII_3102 13c17b442ef4f373bdd81c735178618c 425 Gene3D G3DSA:3.30.465.10 343 418 7.2E-24 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_3102 13c17b442ef4f373bdd81c735178618c 425 Pfam PF01595 Domain of unknown function DUF21 15 184 1.8E-49 T 15-10-2018 IPR002550 CNNM, transmembrane domain THII_3102 13c17b442ef4f373bdd81c735178618c 425 Pfam PF00571 CBS domain 206 263 0.0041 T 15-10-2018 IPR000644 CBS domain THII_3102 13c17b442ef4f373bdd81c735178618c 425 Pfam PF00571 CBS domain 278 327 2.2E-4 T 15-10-2018 IPR000644 CBS domain THII_3102 13c17b442ef4f373bdd81c735178618c 425 Gene3D G3DSA:3.10.580.10 187 342 4.0E-46 T 15-10-2018 THII_3102 13c17b442ef4f373bdd81c735178618c 425 SMART SM01091 342 420 1.7E-20 T 15-10-2018 IPR005170 Transporter-associated domain THII_3102 13c17b442ef4f373bdd81c735178618c 425 SUPERFAMILY SSF56176 339 420 2.07E-19 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 THII_3102 13c17b442ef4f373bdd81c735178618c 425 SUPERFAMILY SSF54631 201 345 9.98E-29 T 15-10-2018 THII_3102 13c17b442ef4f373bdd81c735178618c 425 Pfam PF03471 Transporter associated domain 344 419 1.7E-15 T 15-10-2018 IPR005170 Transporter-associated domain THII_2080 3990140f4b7a9172349319acff061620 666 Pfam PF13432 Tetratricopeptide repeat 300 361 0.012 T 15-10-2018 THII_2080 3990140f4b7a9172349319acff061620 666 Gene3D G3DSA:1.25.40.10 366 431 1.1E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 Gene3D G3DSA:1.25.40.10 432 499 5.1E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 Pfam PF13414 TPR repeat 369 410 1.9E-9 T 15-10-2018 THII_2080 3990140f4b7a9172349319acff061620 666 Pfam PF13414 TPR repeat 576 615 2.9E-7 T 15-10-2018 THII_2080 3990140f4b7a9172349319acff061620 666 SUPERFAMILY SSF48452 504 636 8.07E-19 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 Gene3D G3DSA:1.25.40.10 170 365 9.6E-26 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 463 496 1.1E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 362 395 2.9E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 535 568 18.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 328 361 0.012 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 226 259 0.94 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 569 602 2.2 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 603 636 2.7 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 396 428 6.4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 260 293 21.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 294 327 100.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 429 462 0.0044 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SMART SM00028 497 530 350.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 Gene3D G3DSA:1.25.40.10 500 661 7.4E-21 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 SUPERFAMILY SSF48452 228 529 8.43E-52 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2080 3990140f4b7a9172349319acff061620 666 Pfam PF07719 Tetratricopeptide repeat 465 496 9.6E-7 T 15-10-2018 IPR013105 Tetratricopeptide repeat 2 THII_2313 340a7a8c4266a82703dd1eccdfe50821 458 SUPERFAMILY SSF52540 246 438 3.59E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2313 340a7a8c4266a82703dd1eccdfe50821 458 SUPERFAMILY SSF88723 6 155 9.02E-12 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2313 340a7a8c4266a82703dd1eccdfe50821 458 Gene3D G3DSA:3.40.50.300 245 457 7.2E-65 T 15-10-2018 THII_2313 340a7a8c4266a82703dd1eccdfe50821 458 Pfam PF02562 PhoH-like protein 247 450 1.0E-54 T 15-10-2018 IPR003714 PhoH-like protein GO:0005524 THII_2313 340a7a8c4266a82703dd1eccdfe50821 458 Gene3D G3DSA:3.40.50.1010 1 153 3.3E-23 T 15-10-2018 THII_2313 340a7a8c4266a82703dd1eccdfe50821 458 SMART SM00670 4 139 5.4E-11 T 15-10-2018 IPR002716 PIN domain THII_2313 340a7a8c4266a82703dd1eccdfe50821 458 Pfam PF13638 PIN domain 6 151 6.5E-39 T 15-10-2018 IPR002716 PIN domain THII_3690 93bdf341e274553f810480709d4d77c5 565 Gene3D G3DSA:3.30.70.20 485 565 1.1E-8 T 15-10-2018 THII_3690 93bdf341e274553f810480709d4d77c5 565 SUPERFAMILY SSF51971 130 379 7.18E-47 T 15-10-2018 THII_3690 93bdf341e274553f810480709d4d77c5 565 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 130 429 1.4E-28 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_3690 93bdf341e274553f810480709d4d77c5 565 Gene3D G3DSA:1.10.1060.10 32 128 5.8E-23 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_3690 93bdf341e274553f810480709d4d77c5 565 SUPERFAMILY SSF46548 36 139 5.75E-19 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_3690 93bdf341e274553f810480709d4d77c5 565 SUPERFAMILY SSF54862 30 563 4.6E-15 T 15-10-2018 THII_3690 93bdf341e274553f810480709d4d77c5 565 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 37 116 1.2E-17 T 15-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 THII_3690 93bdf341e274553f810480709d4d77c5 565 PRINTS PR00419 Adrenodoxin reductase family signature 196 206 2.1E-20 T 15-10-2018 THII_3690 93bdf341e274553f810480709d4d77c5 565 PRINTS PR00419 Adrenodoxin reductase family signature 130 152 2.1E-20 T 15-10-2018 THII_3690 93bdf341e274553f810480709d4d77c5 565 PRINTS PR00419 Adrenodoxin reductase family signature 262 276 2.1E-20 T 15-10-2018 THII_3690 93bdf341e274553f810480709d4d77c5 565 PRINTS PR00419 Adrenodoxin reductase family signature 153 166 2.1E-20 T 15-10-2018 THII_3690 93bdf341e274553f810480709d4d77c5 565 PRINTS PR00419 Adrenodoxin reductase family signature 304 317 2.1E-20 T 15-10-2018 THII_3690 93bdf341e274553f810480709d4d77c5 565 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 544 555 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_3690 93bdf341e274553f810480709d4d77c5 565 Gene3D G3DSA:3.50.50.60 129 250 2.0E-27 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3690 93bdf341e274553f810480709d4d77c5 565 Gene3D G3DSA:3.50.50.60 258 455 3.8E-19 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3690 93bdf341e274553f810480709d4d77c5 565 Pfam PF00037 4Fe-4S binding domain 537 560 7.7E-6 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_1354 f47e3d0579fb3526ae17c40895047c42 280 SUPERFAMILY SSF53448 10 263 7.5E-13 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1354 f47e3d0579fb3526ae17c40895047c42 280 Gene3D G3DSA:3.90.550.20 6 155 2.9E-5 T 15-10-2018 THII_1354 f47e3d0579fb3526ae17c40895047c42 280 Pfam PF04572 Alpha 1,4-glycosyltransferase conserved region 190 277 7.4E-11 T 15-10-2018 IPR007652 Alpha 1,4-glycosyltransferase domain THII_0967 fd7ed170da18561715150af91b118b7a 214 SUPERFAMILY SSF46894 145 207 6.23E-16 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 THII_0967 fd7ed170da18561715150af91b118b7a 214 SMART SM00448 9 120 1.7E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0967 fd7ed170da18561715150af91b118b7a 214 SMART SM00421 144 201 1.6E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 THII_0967 fd7ed170da18561715150af91b118b7a 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 3.6E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 THII_0967 fd7ed170da18561715150af91b118b7a 214 Gene3D G3DSA:1.10.10.10 137 203 1.5E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0967 fd7ed170da18561715150af91b118b7a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 6.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 THII_0967 fd7ed170da18561715150af91b118b7a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 6.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 THII_0967 fd7ed170da18561715150af91b118b7a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 6.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 THII_0967 fd7ed170da18561715150af91b118b7a 214 Pfam PF00072 Response regulator receiver domain 11 120 4.6E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0967 fd7ed170da18561715150af91b118b7a 214 SUPERFAMILY SSF52172 11 162 1.57E-30 T 15-10-2018 IPR011006 CheY-like superfamily THII_0967 fd7ed170da18561715150af91b118b7a 214 Gene3D G3DSA:3.40.50.2300 4 136 6.1E-36 T 15-10-2018 THII_2358 79a4d4649957106069e8d7952da2e11f 192 SUPERFAMILY SSF52833 23 191 6.25E-34 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_2358 79a4d4649957106069e8d7952da2e11f 192 Pfam PF00578 AhpC/TSA family 26 144 1.0E-18 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 THII_2358 79a4d4649957106069e8d7952da2e11f 192 Gene3D G3DSA:3.40.30.10 20 192 5.1E-38 T 15-10-2018 THII_0199 b897a4dce655e26a5cfe24a3ec3cda4a 764 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 231 415 6.7E-24 T 15-10-2018 IPR004477 ComEC/Rec2-related protein THII_0199 b897a4dce655e26a5cfe24a3ec3cda4a 764 Pfam PF03772 Competence protein 210 482 2.9E-58 T 15-10-2018 IPR004477 ComEC/Rec2-related protein THII_0199 b897a4dce655e26a5cfe24a3ec3cda4a 764 Pfam PF13567 Domain of unknown function (DUF4131) 30 166 5.7E-27 T 15-10-2018 IPR025405 Domain of unknown function DUF4131 THII_0199 b897a4dce655e26a5cfe24a3ec3cda4a 764 SUPERFAMILY SSF56281 509 742 9.17E-47 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_0199 b897a4dce655e26a5cfe24a3ec3cda4a 764 Gene3D G3DSA:3.60.15.10 511 752 8.5E-57 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_0199 b897a4dce655e26a5cfe24a3ec3cda4a 764 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 104 736 1.3E-118 T 15-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 THII_0199 b897a4dce655e26a5cfe24a3ec3cda4a 764 Pfam PF00753 Metallo-beta-lactamase superfamily 518 703 2.8E-12 T 15-10-2018 IPR001279 Metallo-beta-lactamase THII_0199 b897a4dce655e26a5cfe24a3ec3cda4a 764 SMART SM00849 520 708 3.7E-12 T 15-10-2018 IPR001279 Metallo-beta-lactamase THII_2887 dc414404c1bf473eccc6a8ce838282a7 139 Gene3D G3DSA:1.20.120.520 2 138 4.9E-5 T 15-10-2018 THII_2887 dc414404c1bf473eccc6a8ce838282a7 139 Pfam PF01814 Hemerythrin HHE cation binding domain 4 133 9.5E-8 T 15-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 THII_0013 45b70c9292117a0ff5a20e2aaa56eaa2 488 Gene3D G3DSA:2.60.40.2030 30 144 2.6E-28 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0013 45b70c9292117a0ff5a20e2aaa56eaa2 488 Pfam PF03160 Calx-beta domain 25 113 2.2E-18 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0013 45b70c9292117a0ff5a20e2aaa56eaa2 488 SMART SM00237 21 122 5.7E-18 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_0013 45b70c9292117a0ff5a20e2aaa56eaa2 488 Gene3D G3DSA:2.60.40.10 383 487 8.8E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0013 45b70c9292117a0ff5a20e2aaa56eaa2 488 SUPERFAMILY SSF141072 29 145 1.05E-26 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_0088 d43cc00d80a2564ad962070fd9a9adf6 623 SUPERFAMILY SSF53795 231 605 4.49E-31 T 15-10-2018 THII_0088 d43cc00d80a2564ad962070fd9a9adf6 623 Pfam PF16260 Domain of unknown function (DUF4914) 8 619 0.0 T 15-10-2018 IPR032583 Protein of unknown function DUF4914 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 148 245 4.1E-28 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 132 6.2E-37 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 250 358 2.2E-25 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 SUPERFAMILY SSF53738 249 356 2.08E-35 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 386 442 6.7E-12 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 SUPERFAMILY SSF55957 364 453 1.59E-19 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 196 209 3.1E-25 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 225 240 3.1E-25 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 162 181 3.1E-25 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 3.1E-25 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 Gene3D G3DSA:3.40.120.10 164 241 1.3E-33 T 15-10-2018 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 Gene3D G3DSA:3.40.120.10 1 144 7.4E-54 T 15-10-2018 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 SUPERFAMILY SSF53738 3 137 1.57E-41 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 Gene3D G3DSA:3.30.310.50 361 454 5.3E-26 T 15-10-2018 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 Gene3D G3DSA:3.40.120.10 243 360 1.8E-44 T 15-10-2018 THII_1310 1eb9cfc3d01200d023bf98ba96789af6 454 SUPERFAMILY SSF53738 148 247 1.53E-31 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 2.5E-83 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 67 96 2.5E-83 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 2.5E-83 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 120 145 2.5E-83 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 2.5E-83 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 2.5E-83 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 5.6E-125 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 Gene3D G3DSA:3.40.50.720 1 180 1.3E-56 T 15-10-2018 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 SMART SM01350 179 469 8.9E-207 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 15-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 Gene3D G3DSA:1.20.5.320 435 482 7.6E-25 T 15-10-2018 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 172 3.8E-51 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 469 3.6E-227 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 SUPERFAMILY SSF51735 4 177 4.68E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2722 16fabbb5d5239378cd6652bd575635f7 482 SUPERFAMILY SSF48179 177 472 5.99E-124 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 Gene3D G3DSA:1.10.1040.10 181 434 4.3E-101 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 THII_2722 16fabbb5d5239378cd6652bd575635f7 482 PIRSF PIRSF000109 1 477 5.1E-233 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 THII_1420 307c0bace0601351fffca11b17c7a5eb 451 TIGRFAM TIGR01415 trpB_rel: pyridoxal-phosphate dependent TrpB-like enzyme 13 427 1.3E-191 T 15-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_1420 307c0bace0601351fffca11b17c7a5eb 451 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 21 425 39.897 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_1420 307c0bace0601351fffca11b17c7a5eb 451 SUPERFAMILY SSF53686 29 425 4.32E-111 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THII_1420 307c0bace0601351fffca11b17c7a5eb 451 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 75 412 7.2E-44 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme THII_1420 307c0bace0601351fffca11b17c7a5eb 451 Gene3D G3DSA:3.40.50.1100 14 237 2.8E-167 T 15-10-2018 THII_1420 307c0bace0601351fffca11b17c7a5eb 451 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 104 118 - T 15-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_1420 307c0bace0601351fffca11b17c7a5eb 451 PIRSF PIRSF500824 1 434 1.7E-199 T 15-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_1420 307c0bace0601351fffca11b17c7a5eb 451 PIRSF PIRSF001413 9 431 7.8E-114 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 THII_1420 307c0bace0601351fffca11b17c7a5eb 451 Gene3D G3DSA:3.40.50.1100 13 418 2.8E-167 T 15-10-2018 THII_2640 ea41f259d46f1cc4024c03b6ffe9300f 438 Gene3D G3DSA:3.40.50.2000 123 424 1.5E-55 T 15-10-2018 THII_2640 ea41f259d46f1cc4024c03b6ffe9300f 438 Pfam PF00534 Glycosyl transferases group 1 231 405 3.6E-34 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_2640 ea41f259d46f1cc4024c03b6ffe9300f 438 Gene3D G3DSA:3.40.50.2000 216 412 1.5E-55 T 15-10-2018 THII_2640 ea41f259d46f1cc4024c03b6ffe9300f 438 SUPERFAMILY SSF53756 24 427 1.78E-68 T 15-10-2018 THII_3817 901280dd9e1144760eb4df8f020fe290 102 Pfam PF04341 Protein of unknown function, DUF485 11 99 3.8E-35 T 15-10-2018 IPR007436 Protein of unknown function DUF485 THII_2019 169566de932bcc7d52f737f13f2c1ee4 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 6 86 3.1E-17 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_2019 169566de932bcc7d52f737f13f2c1ee4 87 SUPERFAMILY SSF143011 4 85 7.19E-17 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2019 169566de932bcc7d52f737f13f2c1ee4 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 6 86 2.9E-15 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_2019 169566de932bcc7d52f737f13f2c1ee4 87 Gene3D G3DSA:3.30.2310.20 1 86 6.5E-23 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2599 dc4f70930b57811eb2bad1205ccfb555 74 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 2.0E-15 T 15-10-2018 IPR021309 Protein of unknown function DUF2892 THII_0493 4e5c589f8a86256083fcb830806b9e62 146 Gene3D G3DSA:1.20.1220.20 2 146 2.6E-34 T 15-10-2018 THII_0493 4e5c589f8a86256083fcb830806b9e62 146 Pfam PF01724 Domain of unknown function DUF29 6 142 2.0E-53 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 Pfam PF00512 His Kinase A (phospho-acceptor) domain 375 442 3.0E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 Gene3D G3DSA:1.10.287.130 361 444 7.9E-14 T 15-10-2018 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 SUPERFAMILY SSF47384 361 443 1.92E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 SUPERFAMILY SSF55874 432 597 1.44E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1517 bbe035864ca482486a4e07bbc65e866b 599 SUPERFAMILY SSF55785 220 334 9.95E-9 T 15-10-2018 IPR035965 PAS domain superfamily THII_1517 bbe035864ca482486a4e07bbc65e866b 599 SMART SM00086 293 334 4.4E-5 T 15-10-2018 IPR001610 PAC motif THII_1517 bbe035864ca482486a4e07bbc65e866b 599 SMART SM00387 488 599 4.7E-20 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1517 bbe035864ca482486a4e07bbc65e866b 599 Gene3D G3DSA:3.40.50.2300 70 208 1.2E-13 T 15-10-2018 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 Gene3D G3DSA:3.30.450.20 211 360 1.8E-13 T 15-10-2018 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 Gene3D G3DSA:3.30.565.10 447 599 1.1E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1517 bbe035864ca482486a4e07bbc65e866b 599 SMART SM00448 73 195 6.0E-4 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 539 4.2E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 553 4.2E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 578 4.2E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 597 4.2E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 494 597 6.4E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1517 bbe035864ca482486a4e07bbc65e866b 599 SUPERFAMILY SSF52172 73 201 3.56E-12 T 15-10-2018 IPR011006 CheY-like superfamily THII_1517 bbe035864ca482486a4e07bbc65e866b 599 SMART SM00388 374 442 4.9E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1517 bbe035864ca482486a4e07bbc65e866b 599 Pfam PF00072 Response regulator receiver domain 75 183 6.8E-8 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3178 a27bbab08f872f11ccca036011b99ddd 119 Gene3D G3DSA:1.20.5.170 26 77 1.3E-5 T 15-10-2018 THII_1899 870ff1fb8e9ffb5feda051459fcb982f 277 SUPERFAMILY SSF53335 14 276 1.08E-52 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1899 870ff1fb8e9ffb5feda051459fcb982f 277 Gene3D G3DSA:3.40.50.150 19 277 2.7E-63 T 15-10-2018 THII_1899 870ff1fb8e9ffb5feda051459fcb982f 277 Pfam PF08241 Methyltransferase domain 70 168 4.0E-17 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 THII_3559 11157b8ceebf7b5d7547042596924936 228 Gene3D G3DSA:3.80.10.10 15 211 2.9E-36 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3559 11157b8ceebf7b5d7547042596924936 228 Pfam PF12799 Leucine Rich repeats (2 copies) 100 140 2.9E-7 T 15-10-2018 IPR025875 Leucine rich repeat 4 THII_3559 11157b8ceebf7b5d7547042596924936 228 Pfam PF12799 Leucine Rich repeats (2 copies) 144 183 3.0E-12 T 15-10-2018 IPR025875 Leucine rich repeat 4 THII_3559 11157b8ceebf7b5d7547042596924936 228 SMART SM00365 142 163 2.6 T 15-10-2018 THII_3559 11157b8ceebf7b5d7547042596924936 228 SMART SM00365 98 119 6.4 T 15-10-2018 THII_3559 11157b8ceebf7b5d7547042596924936 228 SMART SM00365 164 194 1.2 T 15-10-2018 THII_3559 11157b8ceebf7b5d7547042596924936 228 SMART SM00365 120 141 58.0 T 15-10-2018 THII_3559 11157b8ceebf7b5d7547042596924936 228 SUPERFAMILY SSF52075 84 202 3.66E-31 T 15-10-2018 THII_3559 11157b8ceebf7b5d7547042596924936 228 SMART SM00369 164 185 15.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3559 11157b8ceebf7b5d7547042596924936 228 SMART SM00369 142 163 22.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3559 11157b8ceebf7b5d7547042596924936 228 SMART SM00369 98 121 8.1 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0014 17e55c90780561b93f263045c1d18d7e 73 SUPERFAMILY SSF143120 1 47 1.29E-5 T 15-10-2018 IPR036165 YefM-like superfamily THII_2983 9fa0a7f25e6d9ea6cbfb6d195d85b656 146 Pfam PF01724 Domain of unknown function DUF29 7 143 1.3E-52 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2983 9fa0a7f25e6d9ea6cbfb6d195d85b656 146 Gene3D G3DSA:1.20.1220.20 2 146 2.2E-33 T 15-10-2018 THII_0482 8c951c903bdd344088f197ad31ff287d 544 SUPERFAMILY SSF51294 76 221 3.53E-27 T 15-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_0482 8c951c903bdd344088f197ad31ff287d 544 Pfam PF14890 Intein splicing domain 84 172 1.4E-11 T 15-10-2018 THII_0482 8c951c903bdd344088f197ad31ff287d 544 Pfam PF01139 tRNA-splicing ligase RtcB 28 544 9.3E-136 T 15-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 THII_0482 8c951c903bdd344088f197ad31ff287d 544 SUPERFAMILY SSF103365 12 544 5.23E-130 T 15-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 THII_0482 8c951c903bdd344088f197ad31ff287d 544 Gene3D G3DSA:3.90.1860.10 211 544 1.3E-94 T 15-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 THII_0482 8c951c903bdd344088f197ad31ff287d 544 Gene3D G3DSA:3.90.1860.10 2 160 1.1E-21 T 15-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 THII_0482 8c951c903bdd344088f197ad31ff287d 544 SMART SM00305 181 228 1.3E-5 T 15-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_0482 8c951c903bdd344088f197ad31ff287d 544 SMART SM00306 75 173 6.0E-5 T 15-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_0482 8c951c903bdd344088f197ad31ff287d 544 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 200 223 8.1E-7 T 15-10-2018 IPR030934 Intein C-terminal splicing region THII_0482 8c951c903bdd344088f197ad31ff287d 544 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 77 151 2.5E-8 T 15-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 THII_0638 cc9a9bc25fccf6622c44d3d45faaf1af 380 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 376 3.9E-141 T 15-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 THII_0638 cc9a9bc25fccf6622c44d3d45faaf1af 380 Gene3D G3DSA:3.40.50.2000 4 371 4.0E-138 T 15-10-2018 THII_0638 cc9a9bc25fccf6622c44d3d45faaf1af 380 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 373 2.2E-116 T 15-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 THII_0638 cc9a9bc25fccf6622c44d3d45faaf1af 380 SUPERFAMILY SSF53756 1 378 1.33E-125 T 15-10-2018 THII_0638 cc9a9bc25fccf6622c44d3d45faaf1af 380 Gene3D G3DSA:3.40.50.2000 189 361 4.0E-138 T 15-10-2018 THII_1200 9795abffb675a6c8fa310e64ba117d18 275 SUPERFAMILY SSF56317 1 268 2.22E-78 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily THII_1200 9795abffb675a6c8fa310e64ba117d18 275 Gene3D G3DSA:3.60.110.10 1 273 3.6E-89 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily THII_1200 9795abffb675a6c8fa310e64ba117d18 275 Pfam PF00795 Carbon-nitrogen hydrolase 5 259 3.0E-53 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 THII_1200 9795abffb675a6c8fa310e64ba117d18 275 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 15-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 921 1079 1.6E-43 T 15-10-2018 IPR000160 GGDEF domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 Gene3D G3DSA:3.30.450.20 180 324 3.5E-7 T 15-10-2018 THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 798 916 1.4E-20 T 15-10-2018 IPR000014 PAS domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 663 792 8.1E-13 T 15-10-2018 IPR000014 PAS domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 542 662 2.3E-15 T 15-10-2018 IPR000014 PAS domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SMART SM00052 1092 1338 3.5E-125 T 15-10-2018 IPR001633 EAL domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SMART SM00086 865 909 8.3E-5 T 15-10-2018 IPR001610 PAC motif THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SMART SM00086 613 655 30.0 T 15-10-2018 IPR001610 PAC motif THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SMART SM00086 742 785 4.8 T 15-10-2018 IPR001610 PAC motif THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 Gene3D G3DSA:3.30.450.20 664 792 2.3E-23 T 15-10-2018 THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 Gene3D G3DSA:3.30.450.20 527 663 2.9E-28 T 15-10-2018 THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SMART SM00267 909 1082 2.3E-70 T 15-10-2018 IPR000160 GGDEF domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SMART SM00091 667 735 5.3 T 15-10-2018 IPR000014 PAS domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SMART SM00091 793 859 6.1E-6 T 15-10-2018 IPR000014 PAS domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SMART SM00091 541 607 5.3E-4 T 15-10-2018 IPR000014 PAS domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SUPERFAMILY SSF55785 652 783 5.41E-19 T 15-10-2018 IPR035965 PAS domain superfamily THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SUPERFAMILY SSF55785 546 657 1.71E-22 T 15-10-2018 IPR035965 PAS domain superfamily THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 Gene3D G3DSA:3.20.20.450 1094 1346 7.2E-106 T 15-10-2018 IPR035919 EAL domain superfamily THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 Gene3D G3DSA:3.30.70.270 917 1093 6.4E-60 T 15-10-2018 THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SUPERFAMILY SSF55073 925 1082 1.33E-51 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 Pfam PF00563 EAL domain 1099 1333 7.7E-74 T 15-10-2018 IPR001633 EAL domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 Pfam PF00990 Diguanylate cyclase, GGDEF domain 921 1078 5.7E-51 T 15-10-2018 IPR000160 GGDEF domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 Pfam PF08448 PAS fold 550 657 1.5E-17 T 15-10-2018 IPR013656 PAS fold-4 THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 Pfam PF08448 PAS fold 674 786 2.2E-11 T 15-10-2018 IPR013656 PAS fold-4 THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 Pfam PF13426 PAS domain 804 907 7.1E-13 T 15-10-2018 IPR000014 PAS domain THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SUPERFAMILY SSF55785 798 907 1.17E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 SUPERFAMILY SSF141868 1098 1345 3.66E-93 T 15-10-2018 IPR035919 EAL domain superfamily THII_3889 2b42e0aa1ed47c9ac46fe1829712e317 1347 Gene3D G3DSA:3.30.450.20 793 916 2.7E-34 T 15-10-2018 THII_1512 3275f27076336768fdfbcd184806c373 486 Gene3D G3DSA:1.25.40.10 190 471 2.9E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1512 3275f27076336768fdfbcd184806c373 486 Gene3D G3DSA:3.30.2010.10 58 141 6.9E-8 T 15-10-2018 THII_1512 3275f27076336768fdfbcd184806c373 486 SUPERFAMILY SSF48452 298 445 4.38E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1512 3275f27076336768fdfbcd184806c373 486 Pfam PF01435 Peptidase family M48 63 249 8.0E-34 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 THII_1512 3275f27076336768fdfbcd184806c373 486 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 473 32.14 T 15-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 THII_3172 341337c1981e6760bba0ee019d3eae27 917 SUPERFAMILY SSF52540 128 343 1.17E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3172 341337c1981e6760bba0ee019d3eae27 917 Gene3D G3DSA:3.40.50.300 126 409 1.6E-17 T 15-10-2018 THII_0662 2dfbca403c82762311fd53f83561b8de 220 SUPERFAMILY SSF52540 19 207 7.24E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0662 2dfbca403c82762311fd53f83561b8de 220 SMART SM00382 44 219 3.1E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0662 2dfbca403c82762311fd53f83561b8de 220 Pfam PF00005 ABC transporter 36 175 3.0E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_0662 2dfbca403c82762311fd53f83561b8de 220 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_0662 2dfbca403c82762311fd53f83561b8de 220 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 20 218 2.3E-70 T 15-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 THII_0662 2dfbca403c82762311fd53f83561b8de 220 Gene3D G3DSA:3.40.50.300 11 216 1.1E-44 T 15-10-2018 THII_0246 f22d7ab4ab202bbb782322d2847ec512 387 Gene3D G3DSA:1.20.1250.20 207 386 9.9E-14 T 15-10-2018 THII_0246 f22d7ab4ab202bbb782322d2847ec512 387 SUPERFAMILY SSF103473 2 382 1.15E-30 T 15-10-2018 IPR036259 MFS transporter superfamily THII_0246 f22d7ab4ab202bbb782322d2847ec512 387 Pfam PF07690 Major Facilitator Superfamily 215 378 2.3E-12 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 THII_0246 f22d7ab4ab202bbb782322d2847ec512 387 Gene3D G3DSA:1.20.1250.20 1 201 5.6E-8 T 15-10-2018 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 Gene3D G3DSA:3.20.70.20 215 911 4.4E-244 T 15-10-2018 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 293 904 2.7E-212 T 15-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 745 767 - T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 Pfam PF03477 ATP cone domain 143 228 1.1E-6 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 Pfam PF03477 ATP cone domain 35 131 5.8E-17 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 SUPERFAMILY SSF51998 366 904 1.31E-179 T 15-10-2018 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 Pfam PF02867 Ribonucleotide reductase, barrel domain 367 901 3.1E-179 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 442 461 1.5E-44 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 680 703 1.5E-44 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 577 588 1.5E-44 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 756 783 1.5E-44 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 614 637 1.5E-44 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 PRINTS PR01183 Ribonucleotide reductase large chain signature 652 674 1.5E-44 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 SUPERFAMILY SSF48168 149 365 1.1E-60 T 15-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_0216 7bc7c15a75c299a9dc0f389eae050d48 939 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 290 361 1.6E-21 T 15-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 THII_3896 1375489cc2f13e4679e480a2e590a0e3 255 SMART SM00987 96 244 1.8E-43 T 15-10-2018 THII_3896 1375489cc2f13e4679e480a2e590a0e3 255 SMART SM00986 96 244 1.8E-43 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_3896 1375489cc2f13e4679e480a2e590a0e3 255 SUPERFAMILY SSF52141 71 249 3.92E-64 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_3896 1375489cc2f13e4679e480a2e590a0e3 255 Gene3D G3DSA:3.40.470.10 70 254 3.4E-73 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_3896 1375489cc2f13e4679e480a2e590a0e3 255 Pfam PF03167 Uracil DNA glycosylase superfamily 97 244 4.8E-48 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_3896 1375489cc2f13e4679e480a2e590a0e3 255 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 82 248 1.9E-70 T 15-10-2018 IPR005273 Uracil-DNA glycosylase family 4 THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 SUPERFAMILY SSF54862 50 658 5.86E-17 T 15-10-2018 THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 Gene3D G3DSA:3.50.50.60 145 272 1.2E-33 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 Gene3D G3DSA:3.50.50.60 321 423 1.5E-19 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 Gene3D G3DSA:3.30.70.20 604 660 6.1E-10 T 15-10-2018 THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 Pfam PF13187 4Fe-4S dicluster domain 605 656 6.7E-8 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.6E-19 T 15-10-2018 THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.6E-19 T 15-10-2018 THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.6E-19 T 15-10-2018 THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 PRINTS PR00419 Adrenodoxin reductase family signature 279 293 3.6E-19 T 15-10-2018 THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 Gene3D G3DSA:1.10.1060.10 3 144 2.5E-17 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 475 3.8E-32 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 641 652 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 SUPERFAMILY SSF51971 146 424 4.18E-50 T 15-10-2018 THII_0619 1b7f8c286138a493b25eda8c0b66fcb0 662 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 34 134 3.2E-11 T 15-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 SUPERFAMILY SSF49452 362 439 4.12E-6 T 15-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 Gene3D G3DSA:2.60.40.680 240 352 9.2E-11 T 15-10-2018 THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 Gene3D G3DSA:2.60.40.10 26 123 1.8E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 Gene3D G3DSA:2.60.40.10 124 221 2.1E-17 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 SUPERFAMILY SSF49299 48 123 5.89E-9 T 15-10-2018 IPR035986 PKD domain superfamily THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 SUPERFAMILY SSF49384 240 336 9.94E-9 T 15-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 SUPERFAMILY SSF49384 575 669 1.07E-7 T 15-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 Pfam PF00963 Cohesin domain 243 337 3.1E-5 T 15-10-2018 IPR002102 Cellulosome anchoring protein, cohesin domain GO:0000272|GO:0030246 THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 SMART SM00089 43 125 1.6E-6 T 15-10-2018 IPR022409 PKD/Chitinase domain THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 SMART SM00089 129 221 1.1E-4 T 15-10-2018 IPR022409 PKD/Chitinase domain THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 Gene3D G3DSA:2.60.40.10 660 754 9.6E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2865 ae422bdd71bb4bc44314d4aba3b88719 840 SUPERFAMILY SSF49299 93 215 7.32E-15 T 15-10-2018 IPR035986 PKD domain superfamily THII_1370 e7751d1a89893871580ae538b04f86d4 325 SUPERFAMILY SSF51261 131 322 1.31E-51 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_1370 e7751d1a89893871580ae538b04f86d4 325 Pfam PF01551 Peptidase family M23 226 320 5.6E-31 T 15-10-2018 IPR016047 Peptidase M23 THII_1370 e7751d1a89893871580ae538b04f86d4 325 Gene3D G3DSA:2.60.40.1590 77 170 4.0E-25 T 15-10-2018 THII_1370 e7751d1a89893871580ae538b04f86d4 325 Gene3D G3DSA:2.70.70.10 171 325 8.0E-53 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_1749 75e24f61eb95b380c659332bb33a7af4 255 SUPERFAMILY SSF69572 2 246 1.96E-85 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 THII_1749 75e24f61eb95b380c659332bb33a7af4 255 Pfam PF00899 ThiF family 21 242 2.0E-66 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 THII_1749 75e24f61eb95b380c659332bb33a7af4 255 Gene3D G3DSA:3.40.50.720 1 250 6.8E-91 T 15-10-2018 THII_0580 0ba24e644ed25fd42ba2df4b6ba0bc08 473 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 41 115 3.4E-19 T 15-10-2018 IPR020012 Motility protein FimV, N-terminal THII_3842 6fa45e421346093499f6a1c5fd4f6b9a 77 Pfam PF13711 Domain of unknown function (DUF4160) 9 70 3.1E-19 T 15-10-2018 IPR025427 Protein of unknown function DUF4160 THII_3741 545578d9e5a2e7ba54a69289bb5f1a44 218 SUPERFAMILY SSF56214 31 100 1.05E-12 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 THII_3741 545578d9e5a2e7ba54a69289bb5f1a44 218 Gene3D G3DSA:3.90.470.20 109 202 3.3E-45 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 THII_3741 545578d9e5a2e7ba54a69289bb5f1a44 218 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 108 174 4.7E-13 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 THII_3741 545578d9e5a2e7ba54a69289bb5f1a44 218 Gene3D G3DSA:3.90.470.20 34 215 3.3E-45 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 THII_3741 545578d9e5a2e7ba54a69289bb5f1a44 218 SUPERFAMILY SSF56214 108 200 1.2E-19 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 THII_2294 a21f59af5b47560585d54d446e7845ef 860 Gene3D G3DSA:1.10.287.130 346 423 1.6E-25 T 15-10-2018 THII_2294 a21f59af5b47560585d54d446e7845ef 860 Pfam PF00512 His Kinase A (phospho-acceptor) domain 355 423 4.7E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2294 a21f59af5b47560585d54d446e7845ef 860 SUPERFAMILY SSF52172 8 152 1.24E-36 T 15-10-2018 IPR011006 CheY-like superfamily THII_2294 a21f59af5b47560585d54d446e7845ef 860 SUPERFAMILY SSF55874 412 586 1.57E-46 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2294 a21f59af5b47560585d54d446e7845ef 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 537 8.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2294 a21f59af5b47560585d54d446e7845ef 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 562 8.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2294 a21f59af5b47560585d54d446e7845ef 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 523 8.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2294 a21f59af5b47560585d54d446e7845ef 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 581 8.3E-17 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2294 a21f59af5b47560585d54d446e7845ef 860 SUPERFAMILY SSF52172 606 717 9.11E-31 T 15-10-2018 IPR011006 CheY-like superfamily THII_2294 a21f59af5b47560585d54d446e7845ef 860 SMART SM00448 8 123 2.5E-36 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2294 a21f59af5b47560585d54d446e7845ef 860 SMART SM00448 725 838 1.1E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2294 a21f59af5b47560585d54d446e7845ef 860 SMART SM00448 604 714 6.6E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2294 a21f59af5b47560585d54d446e7845ef 860 Gene3D G3DSA:3.30.565.10 424 586 1.3E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2294 a21f59af5b47560585d54d446e7845ef 860 SUPERFAMILY SSF55785 201 333 1.52E-23 T 15-10-2018 IPR035965 PAS domain superfamily THII_2294 a21f59af5b47560585d54d446e7845ef 860 Gene3D G3DSA:3.30.450.20 223 345 1.4E-26 T 15-10-2018 THII_2294 a21f59af5b47560585d54d446e7845ef 860 SUPERFAMILY SSF47384 341 425 2.55E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2294 a21f59af5b47560585d54d446e7845ef 860 SUPERFAMILY SSF52172 727 845 1.24E-26 T 15-10-2018 IPR011006 CheY-like superfamily THII_2294 a21f59af5b47560585d54d446e7845ef 860 SMART SM00388 355 423 1.8E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2294 a21f59af5b47560585d54d446e7845ef 860 SMART SM00091 216 282 6.1E-8 T 15-10-2018 IPR000014 PAS domain THII_2294 a21f59af5b47560585d54d446e7845ef 860 SMART SM00086 294 335 0.0023 T 15-10-2018 IPR001610 PAC motif THII_2294 a21f59af5b47560585d54d446e7845ef 860 Pfam PF00072 Response regulator receiver domain 727 833 3.0E-18 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2294 a21f59af5b47560585d54d446e7845ef 860 Pfam PF00072 Response regulator receiver domain 10 124 9.2E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2294 a21f59af5b47560585d54d446e7845ef 860 Pfam PF00072 Response regulator receiver domain 606 714 1.1E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2294 a21f59af5b47560585d54d446e7845ef 860 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 220 342 2.4E-20 T 15-10-2018 IPR000014 PAS domain THII_2294 a21f59af5b47560585d54d446e7845ef 860 Pfam PF00989 PAS fold 219 332 4.8E-14 T 15-10-2018 IPR013767 PAS fold GO:0006355 THII_2294 a21f59af5b47560585d54d446e7845ef 860 Gene3D G3DSA:3.40.50.12740 8 222 5.1E-42 T 15-10-2018 THII_2294 a21f59af5b47560585d54d446e7845ef 860 Gene3D G3DSA:3.40.50.12740 604 722 2.8E-33 T 15-10-2018 THII_2294 a21f59af5b47560585d54d446e7845ef 860 SMART SM00387 469 584 4.4E-36 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2294 a21f59af5b47560585d54d446e7845ef 860 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 581 7.0E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2294 a21f59af5b47560585d54d446e7845ef 860 Gene3D G3DSA:3.40.50.2300 723 855 1.1E-29 T 15-10-2018 THII_0829 2f7f47845cd9b0ad58983410715f75c5 259 Pfam PF00535 Glycosyl transferase family 2 5 127 4.2E-19 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0829 2f7f47845cd9b0ad58983410715f75c5 259 Gene3D G3DSA:3.90.550.10 1 220 1.9E-25 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0829 2f7f47845cd9b0ad58983410715f75c5 259 SUPERFAMILY SSF53448 2 147 3.0E-27 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1394 389d07865662476450153a679740f0a0 404 SUPERFAMILY SSF53706 8 246 2.54E-6 T 15-10-2018 THII_0181 a13d0a431cf5da74c6225b2919db2080 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 365 6.2E-23 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 THII_0181 a13d0a431cf5da74c6225b2919db2080 420 Pfam PF07498 Rho termination factor, N-terminal domain 8 49 1.4E-15 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 THII_0181 a13d0a431cf5da74c6225b2919db2080 420 SMART SM00959 7 49 1.9E-15 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 THII_0181 a13d0a431cf5da74c6225b2919db2080 420 SUPERFAMILY SSF68912 3 48 1.37E-10 T 15-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily THII_0181 a13d0a431cf5da74c6225b2919db2080 420 SUPERFAMILY SSF50249 50 127 4.71E-30 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0181 a13d0a431cf5da74c6225b2919db2080 420 Pfam PF07497 Rho termination factor, RNA-binding domain 54 127 3.8E-32 T 15-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 THII_0181 a13d0a431cf5da74c6225b2919db2080 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 4 419 8.7E-216 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 THII_0181 a13d0a431cf5da74c6225b2919db2080 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 420 251.024 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 THII_0181 a13d0a431cf5da74c6225b2919db2080 420 SMART SM00357 54 120 2.0E-18 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 THII_0181 a13d0a431cf5da74c6225b2919db2080 420 SMART SM00382 172 352 1.4E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0181 a13d0a431cf5da74c6225b2919db2080 420 SUPERFAMILY SSF52540 92 373 4.65E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0181 a13d0a431cf5da74c6225b2919db2080 420 Gene3D G3DSA:2.40.50.140 50 119 2.4E-35 T 15-10-2018 THII_0181 a13d0a431cf5da74c6225b2919db2080 420 Gene3D G3DSA:1.10.720.10 1 49 2.7E-18 T 15-10-2018 THII_0181 a13d0a431cf5da74c6225b2919db2080 420 Gene3D G3DSA:3.40.50.300 132 419 1.8E-131 T 15-10-2018 THII_3241 e6d7218849b2e89939a6ac07ca1c4524 237 SUPERFAMILY SSF51206 9 138 1.24E-16 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like THII_3241 e6d7218849b2e89939a6ac07ca1c4524 237 Pfam PF13545 Crp-like helix-turn-helix domain 150 217 5.3E-15 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 THII_3241 e6d7218849b2e89939a6ac07ca1c4524 237 Gene3D G3DSA:1.10.10.10 149 218 3.5E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3241 e6d7218849b2e89939a6ac07ca1c4524 237 SMART SM00419 162 210 1.2E-5 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 THII_3241 e6d7218849b2e89939a6ac07ca1c4524 237 SUPERFAMILY SSF46785 147 222 2.97E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_3241 e6d7218849b2e89939a6ac07ca1c4524 237 Pfam PF00027 Cyclic nucleotide-binding domain 32 115 2.1E-7 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_3241 e6d7218849b2e89939a6ac07ca1c4524 237 SMART SM00100 12 133 5.7E-5 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_3241 e6d7218849b2e89939a6ac07ca1c4524 237 Gene3D G3DSA:2.60.120.10 8 148 1.7E-11 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_0130 2980adb01a8ebac867857ea48bf4e02b 376 SUPERFAMILY SSF52317 47 211 4.81E-5 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_0130 2980adb01a8ebac867857ea48bf4e02b 376 Pfam PF14258 Domain of unknown function (DUF4350) 30 96 3.3E-9 T 15-10-2018 IPR025646 Domain of unknown function DUF4350 THII_0340 40fc169cb6d85824d91397f73b05a1cf 441 Gene3D G3DSA:3.20.20.70 79 311 9.1E-24 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0340 40fc169cb6d85824d91397f73b05a1cf 441 SUPERFAMILY SSF102114 83 289 1.29E-22 T 15-10-2018 THII_2239 84a91aaa02d8f7a5590b7928be224a36 165 SUPERFAMILY SSF143422 6 131 2.62E-38 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_2239 84a91aaa02d8f7a5590b7928be224a36 165 SMART SM01321 14 133 2.8E-29 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_2239 84a91aaa02d8f7a5590b7928be224a36 165 Pfam PF01797 Transposase IS200 like 15 132 6.0E-33 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_2239 84a91aaa02d8f7a5590b7928be224a36 165 Gene3D G3DSA:3.30.70.1290 1 133 6.0E-40 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_0034 47a104c07c7709c1ff2f44f7b14fe5ef 228 Gene3D G3DSA:3.40.50.300 1 228 6.7E-76 T 15-10-2018 THII_0034 47a104c07c7709c1ff2f44f7b14fe5ef 228 SUPERFAMILY SSF52540 6 225 9.28E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0034 47a104c07c7709c1ff2f44f7b14fe5ef 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 221 1.6E-74 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 THII_0034 47a104c07c7709c1ff2f44f7b14fe5ef 228 Pfam PF02224 Cytidylate kinase 8 223 3.4E-73 T 15-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 THII_0034 47a104c07c7709c1ff2f44f7b14fe5ef 228 Hamap MF_00238 Cytidylate kinase [cmk]. 6 226 31.966 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 THII_1532 e28f91eb0a377b12ddf117ab042683cf 213 Gene3D G3DSA:1.10.760.10 38 113 3.9E-26 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1532 e28f91eb0a377b12ddf117ab042683cf 213 Gene3D G3DSA:1.10.760.10 116 213 8.8E-27 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1532 e28f91eb0a377b12ddf117ab042683cf 213 SUPERFAMILY SSF46626 121 211 2.81E-18 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1532 e28f91eb0a377b12ddf117ab042683cf 213 SUPERFAMILY SSF46626 45 113 4.05E-21 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1532 e28f91eb0a377b12ddf117ab042683cf 213 Pfam PF00034 Cytochrome c 34 111 8.6E-9 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1532 e28f91eb0a377b12ddf117ab042683cf 213 Pfam PF00034 Cytochrome c 124 211 2.4E-8 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1532 e28f91eb0a377b12ddf117ab042683cf 213 PIRSF PIRSF000005 1 213 1.1E-61 T 15-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 THII_2574 dcacb9b8c06757c0083c0f2997e4bda8 134 Pfam PF01850 PIN domain 3 125 2.5E-16 T 15-10-2018 IPR002716 PIN domain THII_2574 dcacb9b8c06757c0083c0f2997e4bda8 134 Gene3D G3DSA:3.40.50.1010 1 132 1.5E-33 T 15-10-2018 THII_2574 dcacb9b8c06757c0083c0f2997e4bda8 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 130 10.702 T 15-10-2018 IPR022907 VapC family GO:0004540 THII_2574 dcacb9b8c06757c0083c0f2997e4bda8 134 SUPERFAMILY SSF88723 1 132 1.18E-29 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 SMART SM00260 606 746 2.3E-37 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 Gene3D G3DSA:2.40.50.180 637 701 1.7E-37 T 15-10-2018 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 SMART SM00073 5 102 5.1E-28 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 SMART SM00387 473 614 1.9E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 532 1.1E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 592 1.1E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 611 1.1E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 Pfam PF01627 Hpt domain 7 96 3.3E-16 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 SMART SM01231 365 428 1.1E-20 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 Pfam PF01584 CheW-like domain 621 747 1.8E-24 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 366 428 5.3E-18 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 SUPERFAMILY SSF47226 5 123 3.14E-28 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 SUPERFAMILY SSF50341 613 746 1.57E-29 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 Gene3D G3DSA:3.30.565.10 429 613 3.3E-59 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 Gene3D G3DSA:1.20.120.160 2 143 2.6E-35 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 Gene3D G3DSA:2.30.30.40 614 742 1.7E-37 T 15-10-2018 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 SUPERFAMILY SSF55874 431 612 5.63E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 613 1.6E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 Gene3D G3DSA:1.10.287.560 365 428 2.6E-17 T 15-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 THII_2177 4d29db9ad37cdbe3eaa1d7c5a07d0ed6 768 SUPERFAMILY SSF47384 366 429 1.45E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 25 585 1.7E-137 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 131 140 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 Gene3D G3DSA:3.30.1360.70 1 110 2.2E-26 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 136 3.0E-20 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 173 3.0E-20 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 335 356 3.0E-20 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 152 3.0E-20 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 585 26.213 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 SMART SM00836 466 585 8.2E-52 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 SUPERFAMILY SSF55190 4 112 3.53E-24 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 Pfam PF05746 DALR anticodon binding domain 466 585 7.9E-35 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 Pfam PF00750 tRNA synthetases class I (R) 277 436 3.2E-11 T 15-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 Pfam PF00750 tRNA synthetases class I (R) 101 178 1.9E-10 T 15-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 Gene3D G3DSA:3.40.50.620 121 460 2.9E-160 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 SUPERFAMILY SSF52374 116 477 6.66E-87 T 15-10-2018 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 SUPERFAMILY SSF47323 461 585 6.28E-35 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 SMART SM01016 3 92 3.5E-36 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 3 92 4.3E-25 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 THII_3000 d6d1c02b53fee29df710d180bcf4c8a1 585 Gene3D G3DSA:1.10.730.10 461 585 2.9E-160 T 15-10-2018 THII_0201 33f83746ad42dd41d5b49eab52aeff7f 246 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 4 244 1.5E-91 T 15-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 THII_0201 33f83746ad42dd41d5b49eab52aeff7f 246 SUPERFAMILY SSF53167 3 245 6.41E-84 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 THII_0201 33f83746ad42dd41d5b49eab52aeff7f 246 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 245 35.016 T 15-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 THII_0201 33f83746ad42dd41d5b49eab52aeff7f 246 Gene3D G3DSA:3.40.50.1580 2 246 1.1E-82 T 15-10-2018 THII_0201 33f83746ad42dd41d5b49eab52aeff7f 246 Pfam PF01048 Phosphorylase superfamily 4 243 9.5E-49 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 THII_1496 2a862f0c984bbfd3a8feeca972ee1ef5 556 SMART SM00382 119 255 0.0023 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1496 2a862f0c984bbfd3a8feeca972ee1ef5 556 PRINTS PR00364 Disease resistance protein signature 286 300 2.9E-5 T 15-10-2018 THII_1496 2a862f0c984bbfd3a8feeca972ee1ef5 556 PRINTS PR00364 Disease resistance protein signature 196 210 2.9E-5 T 15-10-2018 THII_1496 2a862f0c984bbfd3a8feeca972ee1ef5 556 PRINTS PR00364 Disease resistance protein signature 122 137 2.9E-5 T 15-10-2018 THII_1496 2a862f0c984bbfd3a8feeca972ee1ef5 556 Gene3D G3DSA:3.40.50.300 80 241 2.2E-23 T 15-10-2018 THII_1496 2a862f0c984bbfd3a8feeca972ee1ef5 556 SUPERFAMILY SSF52540 113 344 6.18E-31 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1496 2a862f0c984bbfd3a8feeca972ee1ef5 556 Gene3D G3DSA:1.25.40.370 420 540 5.5E-15 T 15-10-2018 THII_1496 2a862f0c984bbfd3a8feeca972ee1ef5 556 Pfam PF00931 NB-ARC domain 111 371 2.8E-23 T 15-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 THII_1496 2a862f0c984bbfd3a8feeca972ee1ef5 556 Gene3D G3DSA:1.10.10.10 338 419 2.3E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1496 2a862f0c984bbfd3a8feeca972ee1ef5 556 Gene3D G3DSA:1.10.8.430 254 337 8.2E-11 T 15-10-2018 THII_1299 0e1423afa88a6cdf17373987a7fabd95 581 SUPERFAMILY SSF53474 220 508 9.67E-34 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1299 0e1423afa88a6cdf17373987a7fabd95 581 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 261 7.2E-70 T 15-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 THII_1299 0e1423afa88a6cdf17373987a7fabd95 581 Gene3D G3DSA:3.40.50.1820 214 494 3.2E-7 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1299 0e1423afa88a6cdf17373987a7fabd95 581 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 53 577 2.0E-221 T 15-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 Gene3D G3DSA:3.40.630.30 724 891 1.4E-41 T 15-10-2018 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 SUPERFAMILY SSF56059 489 709 8.58E-37 T 15-10-2018 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 156 293 9.4E-50 T 15-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 SUPERFAMILY SSF55729 737 880 5.68E-21 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 Gene3D G3DSA:3.40.50.261 298 462 1.4E-56 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 SMART SM00881 9 105 1.1E-32 T 15-10-2018 IPR003781 CoA-binding GO:0048037 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 Gene3D G3DSA:3.40.50.261 135 296 3.5E-51 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 Pfam PF00583 Acetyltransferase (GNAT) family 795 878 1.4E-8 T 15-10-2018 IPR000182 GNAT domain THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 Pfam PF13380 CoA binding domain 14 139 3.4E-21 T 15-10-2018 IPR003781 CoA-binding GO:0048037 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 Gene3D G3DSA:3.30.1490.20 509 590 2.6E-70 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 Gene3D G3DSA:3.40.50.720 4 134 3.9E-39 T 15-10-2018 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 Pfam PF13549 ATP-grasp domain 483 707 4.3E-76 T 15-10-2018 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 Gene3D G3DSA:3.30.470.20 491 705 2.6E-70 T 15-10-2018 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 SUPERFAMILY SSF52210 134 296 9.03E-42 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 SUPERFAMILY SSF52210 301 456 2.75E-44 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 THII_1100 c42e1bb64d389ee82df9177e59eefc3f 896 SUPERFAMILY SSF51735 2 144 2.23E-34 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0218 29341a637cabfd339b16d3ae3e6a009b 434 Pfam PF12576 Protein of unknown function (DUF3754) 138 328 7.8E-32 T 15-10-2018 IPR022227 Protein of unknown function DUF3754 THII_1320 4fa35b3ccf73189a9d0ddf1115aa5503 129 Gene3D G3DSA:3.40.1350.10 14 127 1.5E-34 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 THII_1320 4fa35b3ccf73189a9d0ddf1115aa5503 129 Pfam PF02021 Uncharacterised protein family UPF0102 15 106 3.0E-28 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 THII_1320 4fa35b3ccf73189a9d0ddf1115aa5503 129 SUPERFAMILY SSF52980 10 108 1.11E-20 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1320 4fa35b3ccf73189a9d0ddf1115aa5503 129 Hamap MF_00048 UPF0102 protein YraN [yraN]. 8 119 22.161 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 THII_1320 4fa35b3ccf73189a9d0ddf1115aa5503 129 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 9 124 3.7E-33 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 THII_3616 17f2370e39adff1f110bf9b13ef748eb 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 227 1.5E-82 T 15-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 THII_3616 17f2370e39adff1f110bf9b13ef748eb 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 243 102.213 T 15-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 THII_3616 17f2370e39adff1f110bf9b13ef748eb 243 Gene3D G3DSA:3.60.21.10 3 242 1.5E-8 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like THII_3616 17f2370e39adff1f110bf9b13ef748eb 243 SUPERFAMILY SSF56300 5 239 5.32E-22 T 15-10-2018 THII_3547 416f84d38e5a11abafa7c76a40995d73 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 204 216 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site THII_3547 416f84d38e5a11abafa7c76a40995d73 323 Pfam PF00348 Polyprenyl synthetase 33 261 6.4E-76 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 THII_3547 416f84d38e5a11abafa7c76a40995d73 323 Gene3D G3DSA:1.10.600.10 1 322 2.9E-111 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily THII_3547 416f84d38e5a11abafa7c76a40995d73 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 96 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site THII_3547 416f84d38e5a11abafa7c76a40995d73 323 SUPERFAMILY SSF48576 6 323 5.76E-96 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily THII_0532 96dcd8c6f2e79a96b6d891310be7f1c3 150 Gene3D G3DSA:1.20.1220.20 2 148 2.1E-32 T 15-10-2018 THII_0532 96dcd8c6f2e79a96b6d891310be7f1c3 150 Pfam PF01724 Domain of unknown function DUF29 7 143 4.4E-50 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0807 b599685c727f52a7b862d12cfcae2691 487 Gene3D G3DSA:1.20.1280.70 343 402 4.3E-7 T 15-10-2018 THII_0807 b599685c727f52a7b862d12cfcae2691 487 Pfam PF08411 Exonuclease C-terminal 311 469 3.4E-12 T 15-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 THII_0807 b599685c727f52a7b862d12cfcae2691 487 Pfam PF00929 Exonuclease 6 183 1.6E-9 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_0807 b599685c727f52a7b862d12cfcae2691 487 Gene3D G3DSA:3.30.420.10 1 189 2.3E-55 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 THII_0807 b599685c727f52a7b862d12cfcae2691 487 SUPERFAMILY SSF53098 1 470 1.25E-70 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_3726 0c76081df7b8fb0e54146558709d5c4f 283 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 29 34 - T 15-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 THII_3726 0c76081df7b8fb0e54146558709d5c4f 283 SUPERFAMILY SSF53335 8 266 9.9E-61 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3726 0c76081df7b8fb0e54146558709d5c4f 283 Pfam PF01555 DNA methylase 26 262 4.9E-42 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 THII_3726 0c76081df7b8fb0e54146558709d5c4f 283 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 223 241 4.0E-26 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_3726 0c76081df7b8fb0e54146558709d5c4f 283 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 57 77 4.0E-26 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_3726 0c76081df7b8fb0e54146558709d5c4f 283 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 24 38 4.0E-26 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_3726 0c76081df7b8fb0e54146558709d5c4f 283 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 246 266 4.0E-26 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_3726 0c76081df7b8fb0e54146558709d5c4f 283 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 204 221 4.0E-26 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_3726 0c76081df7b8fb0e54146558709d5c4f 283 Gene3D G3DSA:3.40.50.150 5 279 3.2E-65 T 15-10-2018 THII_3855 38dd3273d0e4b2be1fb39b75b3793c4d 140 SMART SM00530 6 61 1.5E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_3855 38dd3273d0e4b2be1fb39b75b3793c4d 140 Pfam PF12844 Helix-turn-helix domain 5 64 6.7E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_3855 38dd3273d0e4b2be1fb39b75b3793c4d 140 Gene3D G3DSA:1.10.260.40 1 83 5.6E-16 T 15-10-2018 THII_3855 38dd3273d0e4b2be1fb39b75b3793c4d 140 SUPERFAMILY SSF47413 1 68 3.75E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_0033 a3706bac1015ff5139846c9d92c3a62b 104 Pfam PF09723 Zinc ribbon domain 1 44 6.8E-12 T 15-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain THII_0033 a3706bac1015ff5139846c9d92c3a62b 104 SMART SM00834 1 45 2.2E-6 T 15-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain THII_0033 a3706bac1015ff5139846c9d92c3a62b 104 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 49 7.6E-9 T 15-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain THII_2175 8e1aa67ce011174f0e37c971ad981311 779 SUPERFAMILY SSF58104 452 735 2.62E-72 T 15-10-2018 THII_2175 8e1aa67ce011174f0e37c971ad981311 779 Gene3D G3DSA:3.30.450.20 268 388 3.3E-33 T 15-10-2018 THII_2175 8e1aa67ce011174f0e37c971ad981311 779 SMART SM00304 210 262 6.5 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2175 8e1aa67ce011174f0e37c971ad981311 779 SMART SM00304 432 484 0.091 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_2175 8e1aa67ce011174f0e37c971ad981311 779 Gene3D G3DSA:1.20.1480.50 171 267 2.0E-6 T 15-10-2018 THII_2175 8e1aa67ce011174f0e37c971ad981311 779 Gene3D G3DSA:1.10.287.950 436 733 1.3E-85 T 15-10-2018 THII_2175 8e1aa67ce011174f0e37c971ad981311 779 SMART SM00283 485 732 8.0E-97 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_2175 8e1aa67ce011174f0e37c971ad981311 779 Pfam PF13188 PAS domain 273 320 3.5E-4 T 15-10-2018 IPR000014 PAS domain THII_2175 8e1aa67ce011174f0e37c971ad981311 779 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 544 700 3.2E-53 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_2175 8e1aa67ce011174f0e37c971ad981311 779 SUPERFAMILY SSF55785 259 384 1.74E-6 T 15-10-2018 IPR035965 PAS domain superfamily THII_0432 8445d86c4264f1eb89164e9e7e9cdf9c 127 Gene3D G3DSA:1.20.1300.10 11 123 6.0E-23 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0432 8445d86c4264f1eb89164e9e7e9cdf9c 127 SUPERFAMILY SSF81343 11 123 5.23E-21 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_0432 8445d86c4264f1eb89164e9e7e9cdf9c 127 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 120 5.5E-20 T 15-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 THII_0432 8445d86c4264f1eb89164e9e7e9cdf9c 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1 115 1.4E-11 T 15-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_2132 eb099537fdcbb23aa43d64b82d98f72e 366 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 366 39.446 T 15-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 THII_2132 eb099537fdcbb23aa43d64b82d98f72e 366 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 3 365 8.5E-147 T 15-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 THII_2132 eb099537fdcbb23aa43d64b82d98f72e 366 SUPERFAMILY SSF53067 3 341 6.26E-21 T 15-10-2018 THII_2132 eb099537fdcbb23aa43d64b82d98f72e 366 Gene3D G3DSA:3.30.420.40 9 362 2.3E-128 T 15-10-2018 THII_2132 eb099537fdcbb23aa43d64b82d98f72e 366 Gene3D G3DSA:3.30.420.40 145 327 2.3E-128 T 15-10-2018 THII_3374 f03b3e97bf8d3fe4bfe878460dac0162 116 SUPERFAMILY SSF52091 18 109 1.06E-5 T 15-10-2018 IPR036513 STAS domain superfamily THII_3374 f03b3e97bf8d3fe4bfe878460dac0162 116 Gene3D G3DSA:3.30.750.24 12 111 1.1E-5 T 15-10-2018 IPR036513 STAS domain superfamily THII_3853 bdbe675da18a03e9182151980d9c58d1 301 Pfam PF12644 Protein of unknown function (DUF3782) 143 220 1.7E-21 T 15-10-2018 IPR024271 Protein of unknown function DUF3782 THII_3853 bdbe675da18a03e9182151980d9c58d1 301 Pfam PF07788 PD-(D/E)XK nuclease superfamily 221 290 7.2E-26 T 15-10-2018 IPR012431 PD-(D/E)XK nuclease THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 Pfam PF13426 PAS domain 234 337 7.7E-8 T 15-10-2018 IPR000014 PAS domain THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 Gene3D G3DSA:3.30.450.20 222 363 2.6E-22 T 15-10-2018 THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 SMART SM00091 223 290 6.2E-4 T 15-10-2018 IPR000014 PAS domain THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 SUPERFAMILY SSF55785 234 345 3.14E-20 T 15-10-2018 IPR035965 PAS domain superfamily THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 SUPERFAMILY SSF58104 409 690 6.41E-65 T 15-10-2018 THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 224 345 5.5E-19 T 15-10-2018 IPR000014 PAS domain THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 SMART SM00304 167 220 3.3 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 SMART SM00304 389 441 1.3 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 501 656 3.6E-47 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 SMART SM00283 442 689 3.0E-72 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 Gene3D G3DSA:1.10.287.950 391 691 3.5E-74 T 15-10-2018 THII_3210 33c78d281f7e99a1903ac634fef74cfe 692 Gene3D G3DSA:3.30.450.20 42 142 7.0E-9 T 15-10-2018 THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 SMART SM00052 441 686 2.7E-41 T 15-10-2018 IPR001633 EAL domain THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 Gene3D G3DSA:3.20.20.450 432 690 1.1E-67 T 15-10-2018 IPR035919 EAL domain superfamily THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 SUPERFAMILY SSF52172 5 93 6.7E-7 T 15-10-2018 IPR011006 CheY-like superfamily THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 Pfam PF13426 PAS domain 155 255 9.5E-8 T 15-10-2018 IPR000014 PAS domain THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 269 425 2.3E-22 T 15-10-2018 IPR000160 GGDEF domain THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 SUPERFAMILY SSF55785 130 252 1.43E-10 T 15-10-2018 IPR035965 PAS domain superfamily THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 428 1.8E-15 T 15-10-2018 IPR000160 GGDEF domain THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 262 4.1E-6 T 15-10-2018 IPR000014 PAS domain THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 Gene3D G3DSA:3.30.70.270 261 431 2.7E-34 T 15-10-2018 THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 SUPERFAMILY SSF141868 448 687 6.67E-60 T 15-10-2018 IPR035919 EAL domain superfamily THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 SUPERFAMILY SSF55073 273 430 4.79E-22 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 Gene3D G3DSA:3.30.450.20 155 260 2.8E-9 T 15-10-2018 THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 Pfam PF00563 EAL domain 449 681 4.7E-55 T 15-10-2018 IPR001633 EAL domain THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 Gene3D G3DSA:3.40.50.2300 5 154 3.2E-5 T 15-10-2018 THII_1913 3f66ed1bd203f4723d674fe53e9f3348 693 SMART SM00267 256 430 4.1E-21 T 15-10-2018 IPR000160 GGDEF domain THII_1769 3db69fdabfdfa34cb8c571f45cd5be71 148 Gene3D G3DSA:1.20.120.520 2 143 1.1E-23 T 15-10-2018 THII_1769 3db69fdabfdfa34cb8c571f45cd5be71 148 Pfam PF01814 Hemerythrin HHE cation binding domain 4 125 9.6E-21 T 15-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 THII_1567 6d02fec3d11ef2e533bc361c75ddd67e 264 Gene3D G3DSA:3.10.20.10 29 109 1.7E-9 T 15-10-2018 THII_1567 6d02fec3d11ef2e533bc361c75ddd67e 264 Pfam PF02634 FdhD/NarQ family 28 256 4.4E-65 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 THII_1567 6d02fec3d11ef2e533bc361c75ddd67e 264 SUPERFAMILY SSF53927 10 257 6.62E-63 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 THII_1567 6d02fec3d11ef2e533bc361c75ddd67e 264 Gene3D G3DSA:3.40.140.10 117 262 3.4E-38 T 15-10-2018 THII_1567 6d02fec3d11ef2e533bc361c75ddd67e 264 PIRSF PIRSF015626 3 262 7.4E-68 T 15-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 THII_1434 398873c2f896c89ffae80298b825357e 164 Gene3D G3DSA:3.30.310.70 31 159 2.2E-12 T 15-10-2018 IPR035923 TT1751-like domain superfamily THII_1434 398873c2f896c89ffae80298b825357e 164 SUPERFAMILY SSF103247 40 158 1.22E-25 T 15-10-2018 IPR035923 TT1751-like domain superfamily THII_1434 398873c2f896c89ffae80298b825357e 164 Pfam PF03625 Domain of unknown function DUF302 74 127 4.5E-11 T 15-10-2018 IPR005180 Domain of unknown function DUF302 THII_2669 16d13eb3d14456715af2dcfc24cfe9ac 357 PIRSF PIRSF029693 34 357 1.1E-133 T 15-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 THII_2669 16d13eb3d14456715af2dcfc24cfe9ac 357 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 40 357 4.0E-140 T 15-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 THII_0143 caf60c0384d1ba7e7df47a71b53f31b2 647 Pfam PF13616 PPIC-type PPIASE domain 261 369 6.5E-32 T 15-10-2018 THII_0143 caf60c0384d1ba7e7df47a71b53f31b2 647 Pfam PF13145 PPIC-type PPIASE domain 374 495 3.9E-7 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 THII_0143 caf60c0384d1ba7e7df47a71b53f31b2 647 Pfam PF13624 SurA N-terminal domain 1 164 2.0E-45 T 15-10-2018 THII_0143 caf60c0384d1ba7e7df47a71b53f31b2 647 SUPERFAMILY SSF109998 40 246 1.96E-21 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily THII_0143 caf60c0384d1ba7e7df47a71b53f31b2 647 SUPERFAMILY SSF54534 260 368 5.44E-34 T 15-10-2018 THII_0143 caf60c0384d1ba7e7df47a71b53f31b2 647 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 307 328 - T 15-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 THII_0143 caf60c0384d1ba7e7df47a71b53f31b2 647 Gene3D G3DSA:3.10.50.40 263 394 2.3E-41 T 15-10-2018 THII_0143 caf60c0384d1ba7e7df47a71b53f31b2 647 Gene3D G3DSA:1.10.4030.30 38 206 2.3E-13 T 15-10-2018 THII_3476 114501ee8ff7d90e4d5ff4a5cede1b90 260 Gene3D G3DSA:3.40.50.150 66 252 1.5E-32 T 15-10-2018 THII_3476 114501ee8ff7d90e4d5ff4a5cede1b90 260 SUPERFAMILY SSF53335 23 246 9.47E-41 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3476 114501ee8ff7d90e4d5ff4a5cede1b90 260 Pfam PF05050 Methyltransferase FkbM domain 85 246 9.2E-23 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_3476 114501ee8ff7d90e4d5ff4a5cede1b90 260 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 82 225 4.9E-31 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_1848 832f14f86bcdaefcb41433b8a0275c43 114 Pfam PF04358 DsrC like protein 4 108 1.9E-34 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE THII_1848 832f14f86bcdaefcb41433b8a0275c43 114 Gene3D G3DSA:1.10.10.370 41 110 3.4E-21 T 15-10-2018 THII_1848 832f14f86bcdaefcb41433b8a0275c43 114 PIRSF PIRSF006223 3 112 1.8E-32 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE THII_1848 832f14f86bcdaefcb41433b8a0275c43 114 SUPERFAMILY SSF69721 3 108 7.46E-31 T 15-10-2018 IPR025526 DsrC-like domain superfamily THII_1848 832f14f86bcdaefcb41433b8a0275c43 114 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 108 8.8E-31 T 15-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE THII_1848 832f14f86bcdaefcb41433b8a0275c43 114 Gene3D G3DSA:3.30.1420.10 2 39 1.7E-14 T 15-10-2018 THII_2382 a16d47ee999e23138a22db5b177c6c84 192 Gene3D G3DSA:3.90.1570.10 2 186 9.0E-17 T 15-10-2018 THII_2382 a16d47ee999e23138a22db5b177c6c84 192 Pfam PF05685 Putative restriction endonuclease 12 174 6.6E-29 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2382 a16d47ee999e23138a22db5b177c6c84 192 SUPERFAMILY SSF52980 1 161 4.66E-22 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1241 2573e989f4112da3d763ea049c1b0e31 81 Gene3D G3DSA:1.10.260.40 1 75 5.5E-22 T 15-10-2018 THII_1241 2573e989f4112da3d763ea049c1b0e31 81 SMART SM00530 14 69 7.9E-16 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_1241 2573e989f4112da3d763ea049c1b0e31 81 SUPERFAMILY SSF47413 4 73 1.21E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_1241 2573e989f4112da3d763ea049c1b0e31 81 Pfam PF01381 Helix-turn-helix 15 66 7.7E-17 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_0211 48c38af63ea1ef8239b7dee933fd3ab7 255 Pfam PF02754 Cysteine-rich domain 12 92 9.2E-11 T 15-10-2018 IPR004017 Cysteine-rich domain THII_0211 48c38af63ea1ef8239b7dee933fd3ab7 255 Pfam PF02754 Cysteine-rich domain 140 224 2.6E-13 T 15-10-2018 IPR004017 Cysteine-rich domain THII_1579 1874075d9bcd8ade327fb34746dd6295 154 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 4 154 5.8E-50 T 15-10-2018 IPR016568 Sulphur oxidation, SoxY THII_1579 1874075d9bcd8ade327fb34746dd6295 154 Pfam PF13501 Sulfur oxidation protein SoxY 50 152 6.7E-33 T 15-10-2018 IPR032711 Ig-like SoxY domain THII_1579 1874075d9bcd8ade327fb34746dd6295 154 PIRSF PIRSF010312 1 154 3.3E-43 T 15-10-2018 IPR016568 Sulphur oxidation, SoxY THII_1579 1874075d9bcd8ade327fb34746dd6295 154 Gene3D G3DSA:2.60.40.2470 31 154 3.1E-46 T 15-10-2018 IPR038162 Ig-like SoxY domain superfamily THII_2712 59a33824d80294881b40b1c1f518c428 352 SUPERFAMILY SSF46785 12 93 2.36E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_2712 59a33824d80294881b40b1c1f518c428 352 Gene3D G3DSA:3.30.390.60 137 239 5.9E-42 T 15-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily THII_2712 59a33824d80294881b40b1c1f518c428 352 PIRSF PIRSF005485 9 351 5.1E-109 T 15-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 THII_2712 59a33824d80294881b40b1c1f518c428 352 Gene3D G3DSA:1.10.10.10 1 94 5.3E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2712 59a33824d80294881b40b1c1f518c428 352 Pfam PF01628 HrcA protein C terminal domain 114 335 4.1E-60 T 15-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 THII_2712 59a33824d80294881b40b1c1f518c428 352 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 14 83 2.1E-5 T 15-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 THII_2712 59a33824d80294881b40b1c1f518c428 352 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 13 348 5.4E-101 T 15-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 THII_2712 59a33824d80294881b40b1c1f518c428 352 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 11 342 28.207 T 15-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 THII_2712 59a33824d80294881b40b1c1f518c428 352 SUPERFAMILY SSF55781 81 350 1.59E-58 T 15-10-2018 THII_2712 59a33824d80294881b40b1c1f518c428 352 Gene3D G3DSA:3.30.450.40 115 346 5.9E-42 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_0538 08a1e9120192ce3545d7197ce9bb29e9 207 SUPERFAMILY SSF52540 24 200 1.04E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0538 08a1e9120192ce3545d7197ce9bb29e9 207 Pfam PF01583 Adenylylsulphate kinase 31 182 4.4E-71 T 15-10-2018 THII_0538 08a1e9120192ce3545d7197ce9bb29e9 207 Gene3D G3DSA:3.40.50.300 7 203 1.6E-83 T 15-10-2018 THII_0538 08a1e9120192ce3545d7197ce9bb29e9 207 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 29 200 38.913 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 THII_0538 08a1e9120192ce3545d7197ce9bb29e9 207 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 13 196 4.7E-84 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 THII_3187 65d0764afcb3f1166e5c5ea428edd9fc 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 157 3.2E-48 T 15-10-2018 IPR008136 CinA, C-terminal THII_3187 65d0764afcb3f1166e5c5ea428edd9fc 160 Gene3D G3DSA:3.90.950.20 1 160 1.3E-59 T 15-10-2018 IPR036653 CinA-like, C-terminal THII_3187 65d0764afcb3f1166e5c5ea428edd9fc 160 Pfam PF02464 Competence-damaged protein 9 158 3.2E-58 T 15-10-2018 IPR008136 CinA, C-terminal THII_3187 65d0764afcb3f1166e5c5ea428edd9fc 160 SUPERFAMILY SSF142433 5 158 3.79E-55 T 15-10-2018 IPR036653 CinA-like, C-terminal THII_2042 133e4c77cb33b1c36bd30eb6c3d92fe2 121 Gene3D G3DSA:1.10.260.40 13 117 5.2E-16 T 15-10-2018 THII_2042 133e4c77cb33b1c36bd30eb6c3d92fe2 121 SMART SM00530 16 72 1.7E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2042 133e4c77cb33b1c36bd30eb6c3d92fe2 121 Pfam PF01381 Helix-turn-helix 19 71 1.3E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2042 133e4c77cb33b1c36bd30eb6c3d92fe2 121 SUPERFAMILY SSF47413 8 76 2.38E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_0449 484763c7cb2363e1b2affbc64b69364f 729 SUPERFAMILY SSF55073 470 652 1.88E-52 T 15-10-2018 IPR029787 Nucleotide cyclase THII_0449 484763c7cb2363e1b2affbc64b69364f 729 SUPERFAMILY SSF158472 386 436 2.22E-10 T 15-10-2018 THII_0449 484763c7cb2363e1b2affbc64b69364f 729 Gene3D G3DSA:3.30.70.1230 467 656 5.9E-55 T 15-10-2018 IPR029787 Nucleotide cyclase THII_0449 484763c7cb2363e1b2affbc64b69364f 729 Pfam PF02743 Cache domain 51 349 9.5E-31 T 15-10-2018 IPR033479 Double Cache domain 1 THII_0449 484763c7cb2363e1b2affbc64b69364f 729 Pfam PF00672 HAMP domain 386 429 1.0E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0449 484763c7cb2363e1b2affbc64b69364f 729 SUPERFAMILY SSF103190 146 244 3.3E-6 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily THII_0449 484763c7cb2363e1b2affbc64b69364f 729 Gene3D G3DSA:1.20.1480.50 352 444 2.0E-17 T 15-10-2018 THII_0449 484763c7cb2363e1b2affbc64b69364f 729 SMART SM00304 386 438 2.7E-12 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0449 484763c7cb2363e1b2affbc64b69364f 729 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 474 646 1.3E-31 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_0449 484763c7cb2363e1b2affbc64b69364f 729 SMART SM00044 438 634 1.1E-8 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_0449 484763c7cb2363e1b2affbc64b69364f 729 Gene3D G3DSA:3.30.450.20 129 234 2.9E-17 T 15-10-2018 THII_1709 5509764b235f3af4ee52c96154e17c17 397 Gene3D G3DSA:3.40.50.2000 192 383 2.6E-34 T 15-10-2018 THII_1709 5509764b235f3af4ee52c96154e17c17 397 SUPERFAMILY SSF53756 6 382 2.83E-65 T 15-10-2018 THII_1709 5509764b235f3af4ee52c96154e17c17 397 Gene3D G3DSA:3.40.50.2000 1 190 2.2E-16 T 15-10-2018 THII_1709 5509764b235f3af4ee52c96154e17c17 397 Pfam PF13579 Glycosyl transferase 4-like domain 15 158 6.3E-15 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 THII_1709 5509764b235f3af4ee52c96154e17c17 397 Pfam PF00534 Glycosyl transferases group 1 194 362 1.1E-30 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_0274 49d9aa71e73d4f21344b7272e2078bbd 1183 Gene3D G3DSA:2.130.10.10 521 748 1.4E-24 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0274 49d9aa71e73d4f21344b7272e2078bbd 1183 Gene3D G3DSA:2.130.10.10 21 214 4.6E-29 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0274 49d9aa71e73d4f21344b7272e2078bbd 1183 Gene3D G3DSA:2.130.10.10 215 468 1.0E-40 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_0274 49d9aa71e73d4f21344b7272e2078bbd 1183 Pfam PF01650 Peptidase C13 family 786 859 5.8E-8 T 15-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 THII_0274 49d9aa71e73d4f21344b7272e2078bbd 1183 Pfam PF07494 Two component regulator propeller 168 190 0.016 T 15-10-2018 IPR011110 Two component regulator propeller THII_0274 49d9aa71e73d4f21344b7272e2078bbd 1183 Pfam PF07494 Two component regulator propeller 492 513 0.0059 T 15-10-2018 IPR011110 Two component regulator propeller THII_0274 49d9aa71e73d4f21344b7272e2078bbd 1183 Pfam PF07494 Two component regulator propeller 352 374 6.2E-4 T 15-10-2018 IPR011110 Two component regulator propeller THII_0274 49d9aa71e73d4f21344b7272e2078bbd 1183 Pfam PF07494 Two component regulator propeller 544 566 0.013 T 15-10-2018 IPR011110 Two component regulator propeller THII_0274 49d9aa71e73d4f21344b7272e2078bbd 1183 SUPERFAMILY SSF63829 34 330 3.17E-6 T 15-10-2018 THII_0274 49d9aa71e73d4f21344b7272e2078bbd 1183 Gene3D G3DSA:2.130.10.10 469 520 3.8E-6 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_2707 8e5bf701d8a793a93741956c3c86f826 351 SUPERFAMILY SSF52540 58 338 7.88E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2707 8e5bf701d8a793a93741956c3c86f826 351 Pfam PF13614 AAA domain 59 257 8.2E-37 T 15-10-2018 IPR025669 AAA domain THII_2707 8e5bf701d8a793a93741956c3c86f826 351 Gene3D G3DSA:3.40.50.300 38 349 4.3E-55 T 15-10-2018 THII_1337 ccc99ff38078d30f865f07912a827117 255 Pfam PF04366 Las17-binding protein actin regulator 129 250 1.8E-29 T 15-10-2018 IPR007461 Ysc84 actin-binding domain THII_1499 f99da91e1f3e3b351d755f875e79e85f 247 Gene3D G3DSA:3.40.50.1010 1 144 2.0E-14 T 15-10-2018 THII_1499 f99da91e1f3e3b351d755f875e79e85f 247 Gene3D G3DSA:1.10.10.1880 176 245 2.4E-19 T 15-10-2018 THII_1499 f99da91e1f3e3b351d755f875e79e85f 247 Pfam PF01936 NYN domain 6 139 2.7E-31 T 15-10-2018 IPR021139 NYN domain, limkain-b1-type THII_1499 f99da91e1f3e3b351d755f875e79e85f 247 Pfam PF12872 OST-HTH/LOTUS domain 171 235 5.5E-12 T 15-10-2018 IPR025605 OST-HTH/LOTUS domain THII_0300 426db7b7d7fbc39286b4488f1fcf3773 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.095 T 15-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0300 426db7b7d7fbc39286b4488f1fcf3773 179 Gene3D G3DSA:3.30.1440.10 1 179 8.7E-78 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0300 426db7b7d7fbc39286b4488f1fcf3773 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 4.4E-40 T 15-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0300 426db7b7d7fbc39286b4488f1fcf3773 179 SUPERFAMILY SSF55282 3 179 4.0E-78 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0300 426db7b7d7fbc39286b4488f1fcf3773 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 15-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0300 426db7b7d7fbc39286b4488f1fcf3773 179 PIRSF PIRSF002161 1 179 3.3E-66 T 15-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0300 426db7b7d7fbc39286b4488f1fcf3773 179 Pfam PF00281 Ribosomal protein L5 25 80 3.0E-28 T 15-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_3249 9ac9a96e1f917da47a808143c6430936 105 Gene3D G3DSA:3.30.420.470 1 104 4.0E-9 T 15-10-2018 THII_3249 9ac9a96e1f917da47a808143c6430936 105 Pfam PF13358 DDE superfamily endonuclease 10 91 7.2E-17 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_0843 0cbb4408e71134a23df424972e379e0a 373 Gene3D G3DSA:2.60.40.10 270 373 5.8E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0843 0cbb4408e71134a23df424972e379e0a 373 Gene3D G3DSA:3.80.10.10 142 260 2.4E-27 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_0843 0cbb4408e71134a23df424972e379e0a 373 SMART SM00369 170 194 5.6 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0843 0cbb4408e71134a23df424972e379e0a 373 SMART SM00369 98 122 14.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0843 0cbb4408e71134a23df424972e379e0a 373 SMART SM00369 146 169 29.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_0843 0cbb4408e71134a23df424972e379e0a 373 Pfam PF13855 Leucine rich repeat 123 183 2.8E-8 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_0843 0cbb4408e71134a23df424972e379e0a 373 SUPERFAMILY SSF52058 38 234 2.78E-45 T 15-10-2018 THII_0843 0cbb4408e71134a23df424972e379e0a 373 Gene3D G3DSA:3.80.10.10 35 141 1.3E-34 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_0843 0cbb4408e71134a23df424972e379e0a 373 PRINTS PR00019 Leucine-rich repeat signature 146 159 2.9E-5 T 15-10-2018 THII_0843 0cbb4408e71134a23df424972e379e0a 373 PRINTS PR00019 Leucine-rich repeat signature 101 114 2.9E-5 T 15-10-2018 THII_1160 0fb4a7dc2e4934053a871474a3679b5a 216 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 16 192 31.229 T 15-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 THII_1160 0fb4a7dc2e4934053a871474a3679b5a 216 Pfam PF02677 Uncharacterized BCR, COG1636 16 190 5.3E-61 T 15-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 Gene3D G3DSA:2.60.40.10 1469 1554 1.8E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 SMART SM00327 88 309 0.0016 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 Gene3D G3DSA:2.60.40.3440 1668 1737 3.1E-5 T 15-10-2018 THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 Gene3D G3DSA:2.60.40.3440 1192 1259 4.2E-7 T 15-10-2018 THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 Gene3D G3DSA:2.60.40.3440 801 870 4.1E-5 T 15-10-2018 THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 SUPERFAMILY SSF53300 91 308 2.6E-13 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1097 1181 4.7E-5 T 15-10-2018 IPR010221 VCBS repeat THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1483 1564 1.2E-5 T 15-10-2018 IPR010221 VCBS repeat THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1577 1657 8.8E-6 T 15-10-2018 IPR010221 VCBS repeat THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1389 1469 8.0E-6 T 15-10-2018 IPR010221 VCBS repeat THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1291 1374 2.5E-7 T 15-10-2018 IPR010221 VCBS repeat THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 998 1084 9.3E-4 T 15-10-2018 IPR010221 VCBS repeat THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 709 792 4.3E-5 T 15-10-2018 IPR010221 VCBS repeat THII_3831 16817ce2ffd2fd0c7f0935d78d2c74ad 2127 Gene3D G3DSA:3.40.50.410 89 306 4.2E-13 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_1712 483e056657b90869ecc6d35757e02331 284 Pfam PF00535 Glycosyl transferase family 2 6 137 4.3E-10 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_1712 483e056657b90869ecc6d35757e02331 284 Gene3D G3DSA:3.90.550.10 2 208 1.5E-14 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1712 483e056657b90869ecc6d35757e02331 284 SUPERFAMILY SSF53448 4 153 1.69E-18 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3567 e3ba43d3d974dd48770b8f23ba822bae 303 Gene3D G3DSA:3.40.50.300 2 233 2.1E-63 T 15-10-2018 THII_3567 e3ba43d3d974dd48770b8f23ba822bae 303 Pfam PF00005 ABC transporter 20 163 7.9E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_3567 e3ba43d3d974dd48770b8f23ba822bae 303 SMART SM00382 29 210 3.6E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3567 e3ba43d3d974dd48770b8f23ba822bae 303 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_3567 e3ba43d3d974dd48770b8f23ba822bae 303 SUPERFAMILY SSF52540 5 231 1.11E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0382 6a39126eb6e531f666c5d5fb80f1d077 320 Gene3D G3DSA:3.40.50.1980 208 318 2.5E-40 T 15-10-2018 THII_0382 6a39126eb6e531f666c5d5fb80f1d077 320 SUPERFAMILY SSF53807 20 317 1.28E-67 T 15-10-2018 THII_0382 6a39126eb6e531f666c5d5fb80f1d077 320 Gene3D G3DSA:3.40.50.1980 25 206 1.5E-48 T 15-10-2018 THII_0382 6a39126eb6e531f666c5d5fb80f1d077 320 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 316 7.8E-63 T 15-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 THII_3852 45cf0e6270abbcd31827bc59cb603c05 369 SUPERFAMILY SSF56219 4 367 2.28E-22 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_3852 45cf0e6270abbcd31827bc59cb603c05 369 Gene3D G3DSA:3.60.10.10 3 369 1.9E-23 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_3852 45cf0e6270abbcd31827bc59cb603c05 369 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 32 359 2.3E-27 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase THII_3475 e5eff9f89838df1f6b1547f7641b5259 419 Pfam PF13203 Putative metallopeptidase domain 6 279 6.8E-47 T 15-10-2018 IPR025154 Putative metallopeptidase domain THII_3475 e5eff9f89838df1f6b1547f7641b5259 419 Pfam PF09967 VWA-like domain (DUF2201) 294 418 1.4E-23 T 15-10-2018 IPR018698 VWA-like domain THII_2117 d76f5d8ea00a49c07e5b76231d999bb4 433 Gene3D G3DSA:3.40.190.10 111 250 3.5E-38 T 15-10-2018 THII_2117 d76f5d8ea00a49c07e5b76231d999bb4 433 Gene3D G3DSA:3.40.190.10 37 270 3.5E-38 T 15-10-2018 THII_2117 d76f5d8ea00a49c07e5b76231d999bb4 433 SUPERFAMILY SSF53850 31 271 1.35E-41 T 15-10-2018 THII_2117 d76f5d8ea00a49c07e5b76231d999bb4 433 Pfam PF16868 NMT1-like family 37 268 7.6E-25 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family THII_0601 2f6aa0706c5c7d4ce6fe08ede5edb270 179 Pfam PF07007 Lysozyme inhibitor LprI 74 155 1.7E-6 T 15-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal THII_0601 2f6aa0706c5c7d4ce6fe08ede5edb270 179 Gene3D G3DSA:1.20.1270.180 60 171 4.2E-7 T 15-10-2018 THII_0824 cde96dbfdabb49c4d5ab1df495b0623b 47 Gene3D G3DSA:3.10.196.10 1 46 2.9E-18 T 15-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_0824 cde96dbfdabb49c4d5ab1df495b0623b 47 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 1 38 5.9E-16 T 15-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_0824 cde96dbfdabb49c4d5ab1df495b0623b 47 SUPERFAMILY SSF56507 1 45 2.88E-16 T 15-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 THII_0622 181c23d4aa6e9295dec0b3057c95fc00 404 Pfam PF03916 Polysulphide reductase, NrfD 45 333 2.4E-52 T 15-10-2018 IPR005614 NrfD family THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 Gene3D G3DSA:1.20.1440.230 477 573 6.8E-26 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 SUPERFAMILY SSF52833 10 176 1.9E-33 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 Gene3D G3DSA:1.10.10.1590 7 73 8.9E-12 T 15-10-2018 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 481 563 2.3E-24 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 492 503 - T 15-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 Gene3D G3DSA:3.40.50.11540 213 392 2.5E-69 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 208 377 2.4E-43 T 15-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 SMART SM00928 479 524 2.0E-20 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 Gene3D G3DSA:3.40.30.10 74 155 1.8E-12 T 15-10-2018 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 SUPERFAMILY SSF142984 402 473 3.01E-13 T 15-10-2018 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 SUPERFAMILY SSF142019 194 401 7.85E-70 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 13 154 3.9E-33 T 15-10-2018 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 SUPERFAMILY SSF140490 476 565 1.83E-27 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1524 01a09f1f48f5d2f474ef09d5358ebfd0 597 Gene3D G3DSA:3.10.20.600 393 471 1.4E-16 T 15-10-2018 THII_2751 defea0c6442b7438534148617c0a7afe 149 SUPERFAMILY SSF51283 2 148 2.88E-44 T 15-10-2018 IPR036157 dUTPase-like superfamily THII_2751 defea0c6442b7438534148617c0a7afe 149 TIGRFAM TIGR00576 dut: dUTP diphosphatase 13 147 1.3E-40 T 15-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 THII_2751 defea0c6442b7438534148617c0a7afe 149 Pfam PF00692 dUTPase 16 147 1.3E-29 T 15-10-2018 IPR029054 dUTPase-like THII_2751 defea0c6442b7438534148617c0a7afe 149 Gene3D G3DSA:2.70.40.10 1 148 3.2E-45 T 15-10-2018 IPR036157 dUTPase-like superfamily THII_3591 f8f864984f066474d6f1f8cf30242d24 202 SUPERFAMILY SSF52972 12 195 7.85E-56 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like THII_3591 f8f864984f066474d6f1f8cf30242d24 202 TIGRFAM TIGR00172 maf: septum formation protein Maf 13 194 5.1E-54 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 THII_3591 f8f864984f066474d6f1f8cf30242d24 202 Gene3D G3DSA:3.90.950.10 13 202 1.1E-56 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like THII_3591 f8f864984f066474d6f1f8cf30242d24 202 PIRSF PIRSF006305 8 202 2.4E-40 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 THII_3591 f8f864984f066474d6f1f8cf30242d24 202 Pfam PF02545 Maf-like protein 14 195 1.1E-43 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 THII_3591 f8f864984f066474d6f1f8cf30242d24 202 Hamap MF_00528 Septum formation protein Maf [maf]. 13 201 29.701 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 THII_3923 6d5776597d6ccb1956033bc59fdfeeb7 138 Gene3D G3DSA:3.30.300.20 4 134 1.8E-17 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta THII_3923 6d5776597d6ccb1956033bc59fdfeeb7 138 Pfam PF02566 OsmC-like protein 32 126 6.1E-12 T 15-10-2018 IPR003718 OsmC/Ohr family THII_3923 6d5776597d6ccb1956033bc59fdfeeb7 138 SUPERFAMILY SSF82784 1 130 9.81E-21 T 15-10-2018 IPR036102 OsmC/Ohr superfamily THII_0221 6dde72a8143f1dc4b64d50081e12be18 155 Pfam PF01724 Domain of unknown function DUF29 7 151 1.8E-49 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0221 6dde72a8143f1dc4b64d50081e12be18 155 Gene3D G3DSA:1.20.1220.20 2 154 2.0E-27 T 15-10-2018 THII_1521 e56b363de032bae35bdb641f5c3819b6 495 Gene3D G3DSA:1.10.645.10 12 462 2.9E-96 T 15-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1521 e56b363de032bae35bdb641f5c3819b6 495 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 453 462 - T 15-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 THII_1521 e56b363de032bae35bdb641f5c3819b6 495 SUPERFAMILY SSF56762 14 462 6.54E-121 T 15-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1521 e56b363de032bae35bdb641f5c3819b6 495 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 51 76 - T 15-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 THII_1521 e56b363de032bae35bdb641f5c3819b6 495 Pfam PF00374 Nickel-dependent hydrogenase 276 462 1.4E-13 T 15-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 THII_1521 e56b363de032bae35bdb641f5c3819b6 495 Pfam PF00374 Nickel-dependent hydrogenase 51 128 3.5E-16 T 15-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 THII_0782 df83c65b88b24031c4f458446882c660 324 PIRSF PIRSF003097 24 320 1.3E-67 T 15-10-2018 IPR004513 Cell division protein FtsX GO:0016021 THII_0782 df83c65b88b24031c4f458446882c660 324 Pfam PF02687 FtsX-like permease family 224 306 8.1E-6 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 THII_3323 2eb8d1df4dc95345b8e2bdc629d82c66 119 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 2 115 3.9E-34 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 THII_3323 2eb8d1df4dc95345b8e2bdc629d82c66 119 Gene3D G3DSA:3.30.479.10 1 118 1.2E-45 T 15-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 THII_3323 2eb8d1df4dc95345b8e2bdc629d82c66 119 SUPERFAMILY SSF55620 1 117 8.89E-39 T 15-10-2018 THII_3323 2eb8d1df4dc95345b8e2bdc629d82c66 119 PIRSF PIRSF006113 1 118 1.5E-45 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 THII_3323 2eb8d1df4dc95345b8e2bdc629d82c66 119 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 2 94 6.4E-32 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 THII_2830 b79522d9e38bf04a66ddd3d1c1c73b9e 134 SUPERFAMILY SSF47413 78 134 1.44E-6 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_2830 b79522d9e38bf04a66ddd3d1c1c73b9e 134 SMART SM00530 79 133 1.8E-4 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2830 b79522d9e38bf04a66ddd3d1c1c73b9e 134 Pfam PF01381 Helix-turn-helix 86 131 1.2E-6 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2830 b79522d9e38bf04a66ddd3d1c1c73b9e 134 Gene3D G3DSA:1.10.260.40 77 134 5.9E-8 T 15-10-2018 THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 Pfam PF03459 TOBE domain 129 192 1.5E-14 T 15-10-2018 IPR005116 Transport-associated OB, type 1 THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 Pfam PF03459 TOBE domain 202 265 3.8E-10 T 15-10-2018 IPR005116 Transport-associated OB, type 1 THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 PIRSF PIRSF005763 5 269 2.7E-95 T 15-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 201 267 2.4E-19 T 15-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 127 193 1.1E-23 T 15-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 Gene3D G3DSA:2.40.50.100 127 193 5.8E-27 T 15-10-2018 THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 SUPERFAMILY SSF50331 127 196 7.29E-22 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 SUPERFAMILY SSF50331 199 268 1.6E-15 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 SUPERFAMILY SSF46785 7 108 6.8E-28 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 Gene3D G3DSA:1.10.10.10 2 125 1.8E-38 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 88 3.2E-14 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 21 111 3.5E-30 T 15-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal THII_3027 a0c62cb1a5b0540f43bf7dc76d36dced 271 Gene3D G3DSA:2.40.50.100 197 269 5.4E-21 T 15-10-2018 THII_0223 71ee2d91b6319d57b61e0a6ba44defd3 590 Gene3D G3DSA:2.40.170.20 137 589 3.5E-111 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily THII_0223 71ee2d91b6319d57b61e0a6ba44defd3 590 Gene3D G3DSA:2.170.130.10 10 134 2.6E-36 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily THII_0223 71ee2d91b6319d57b61e0a6ba44defd3 590 SUPERFAMILY SSF56935 11 588 1.06E-120 T 15-10-2018 THII_0223 71ee2d91b6319d57b61e0a6ba44defd3 590 Pfam PF07715 TonB-dependent Receptor Plug Domain 24 129 8.8E-27 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain THII_0223 71ee2d91b6319d57b61e0a6ba44defd3 590 Pfam PF00593 TonB dependent receptor 198 588 1.4E-46 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 SMART SM00320 58 97 3.4E-14 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 SMART SM00320 228 267 2.4E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 SMART SM00320 270 309 1.0E-4 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 SMART SM00320 186 225 1.0E-13 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 SMART SM00320 312 351 2.5E-12 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 SMART SM00320 100 139 1.5E-13 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 SMART SM00320 142 183 6.3E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 SUPERFAMILY SSF50978 56 351 5.5E-107 T 15-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 PIRSF PIRSF002394 175 351 2.1E-44 T 15-10-2018 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 PIRSF PIRSF002394 58 224 4.3E-43 T 15-10-2018 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 Gene3D G3DSA:2.130.10.10 61 153 5.3E-42 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 212 226 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 84 98 - T 15-10-2018 IPR019775 WD40 repeat, conserved site THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 Pfam PF00400 WD domain, G-beta repeat 233 266 2.5E-6 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 Pfam PF00400 WD domain, G-beta repeat 188 225 5.4E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 Pfam PF00400 WD domain, G-beta repeat 155 182 6.7E-5 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 Pfam PF00400 WD domain, G-beta repeat 314 350 1.3E-9 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 Pfam PF00400 WD domain, G-beta repeat 61 96 1.7E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 Pfam PF00400 WD domain, G-beta repeat 274 308 0.0037 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 Pfam PF00400 WD domain, G-beta repeat 102 138 5.3E-11 T 15-10-2018 IPR001680 WD40 repeat GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 Gene3D G3DSA:2.130.10.10 154 238 2.1E-35 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 Gene3D G3DSA:2.130.10.10 239 351 2.0E-42 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 PRINTS PR00320 G protein beta WD-40 repeat signature 338 351 3.6E-10 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 PRINTS PR00320 G protein beta WD-40 repeat signature 212 226 3.6E-10 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_3139 961e7865c7407f45cbcca062b7ddfb6e 351 PRINTS PR00320 G protein beta WD-40 repeat signature 84 98 3.6E-10 T 15-10-2018 IPR020472 G-protein beta WD-40 repeat THII_0513 cfd575b56bfde8ff8fc7b517fa378e2e 166 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 15-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 THII_0513 cfd575b56bfde8ff8fc7b517fa378e2e 166 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 46.387 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 THII_0513 cfd575b56bfde8ff8fc7b517fa378e2e 166 Gene3D G3DSA:3.30.420.10 3 157 5.0E-52 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 THII_0513 cfd575b56bfde8ff8fc7b517fa378e2e 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 3.7E-39 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 THII_0513 cfd575b56bfde8ff8fc7b517fa378e2e 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 3.7E-39 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 THII_0513 cfd575b56bfde8ff8fc7b517fa378e2e 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 3.7E-39 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 THII_0513 cfd575b56bfde8ff8fc7b517fa378e2e 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 3.7E-39 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 THII_0513 cfd575b56bfde8ff8fc7b517fa378e2e 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 3.7E-39 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 THII_0513 cfd575b56bfde8ff8fc7b517fa378e2e 166 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 2.0E-60 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 THII_0513 cfd575b56bfde8ff8fc7b517fa378e2e 166 SUPERFAMILY SSF53098 1 154 1.92E-53 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_0513 cfd575b56bfde8ff8fc7b517fa378e2e 166 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 7.0E-57 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 THII_1340 e96785d0d741a7af85b309761812c4e4 120 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 77 1.0E-24 T 15-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 THII_1340 e96785d0d741a7af85b309761812c4e4 120 Pfam PF02416 mttA/Hcf106 family 4 47 7.5E-13 T 15-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 THII_1340 e96785d0d741a7af85b309761812c4e4 120 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 116 16.436 T 15-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 THII_1340 e96785d0d741a7af85b309761812c4e4 120 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.5E-22 T 15-10-2018 THII_1340 e96785d0d741a7af85b309761812c4e4 120 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.5E-22 T 15-10-2018 THII_1340 e96785d0d741a7af85b309761812c4e4 120 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.5E-22 T 15-10-2018 THII_3377 cceecdba09316a9342228a6d44330512 1049 SMART SM00645 280 499 1.2E-5 T 15-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 THII_3377 cceecdba09316a9342228a6d44330512 1049 SUPERFAMILY SSF54001 277 483 9.47E-39 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily THII_3377 cceecdba09316a9342228a6d44330512 1049 Pfam PF00112 Papain family cysteine protease 294 482 2.9E-18 T 15-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 THII_3377 cceecdba09316a9342228a6d44330512 1049 Gene3D G3DSA:3.90.70.10 265 491 4.0E-52 T 15-10-2018 THII_3800 0be07b88997e1e5ab6bc9776cc3736f5 282 Pfam PF01012 Electron transfer flavoprotein domain 23 210 1.2E-48 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 THII_3800 0be07b88997e1e5ab6bc9776cc3736f5 282 SMART SM00893 22 218 3.2E-59 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 THII_3800 0be07b88997e1e5ab6bc9776cc3736f5 282 SUPERFAMILY SSF52402 1 265 5.16E-72 T 15-10-2018 THII_3800 0be07b88997e1e5ab6bc9776cc3736f5 282 Gene3D G3DSA:3.40.50.620 1 269 1.9E-86 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_3800 0be07b88997e1e5ab6bc9776cc3736f5 282 PIRSF PIRSF000090 1 272 9.6E-92 T 15-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 THII_3800 0be07b88997e1e5ab6bc9776cc3736f5 282 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 162 182 - T 15-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 THII_3497 15e875d5798d49b97d3328df9efae083 69 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 9 45 8.8E-14 T 15-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB THII_2534 ce498f736e2cc3bcbdc191b015af5a2e 314 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 215 310 1.4E-28 T 15-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2534 ce498f736e2cc3bcbdc191b015af5a2e 314 Gene3D G3DSA:3.30.43.10 21 96 8.8E-23 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 THII_2534 ce498f736e2cc3bcbdc191b015af5a2e 314 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 314 85.956 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2534 ce498f736e2cc3bcbdc191b015af5a2e 314 Gene3D G3DSA:3.90.78.10 228 312 8.7E-32 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2534 ce498f736e2cc3bcbdc191b015af5a2e 314 Pfam PF01565 FAD binding domain 69 174 3.6E-17 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 THII_2534 ce498f736e2cc3bcbdc191b015af5a2e 314 SUPERFAMILY SSF56176 35 217 2.45E-40 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 THII_2534 ce498f736e2cc3bcbdc191b015af5a2e 314 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 35 311 2.8E-60 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2534 ce498f736e2cc3bcbdc191b015af5a2e 314 SUPERFAMILY SSF56194 213 312 5.89E-35 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2534 ce498f736e2cc3bcbdc191b015af5a2e 314 Gene3D G3DSA:3.30.465.10 104 227 1.3E-32 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_0715 035c5f56e04109742ee8bf2110bf7cab 244 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_0715 035c5f56e04109742ee8bf2110bf7cab 244 SUPERFAMILY SSF52540 8 230 4.33E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0715 035c5f56e04109742ee8bf2110bf7cab 244 Gene3D G3DSA:3.40.50.300 7 242 2.1E-42 T 15-10-2018 THII_0715 035c5f56e04109742ee8bf2110bf7cab 244 SMART SM00382 42 215 3.6E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0715 035c5f56e04109742ee8bf2110bf7cab 244 Pfam PF00005 ABC transporter 33 164 1.3E-17 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2106 b19ff41f5d298d18c073dc051c3f14b8 199 Gene3D G3DSA:1.10.3210.10 5 181 9.1E-57 T 15-10-2018 THII_2106 b19ff41f5d298d18c073dc051c3f14b8 199 SUPERFAMILY SSF109604 3 174 2.2E-41 T 15-10-2018 THII_2106 b19ff41f5d298d18c073dc051c3f14b8 199 Pfam PF13328 HD domain 13 145 3.2E-19 T 15-10-2018 IPR003607 HD/PDEase domain THII_2106 b19ff41f5d298d18c073dc051c3f14b8 199 SMART SM00471 30 138 2.0E-4 T 15-10-2018 IPR003607 HD/PDEase domain THII_3758 195a755b1678ce447ce037bf7abd7391 91 Pfam PF01381 Helix-turn-helix 7 61 5.7E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_3758 195a755b1678ce447ce037bf7abd7391 91 SUPERFAMILY SSF47413 1 66 2.53E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_3758 195a755b1678ce447ce037bf7abd7391 91 Gene3D G3DSA:1.10.260.40 1 86 2.7E-17 T 15-10-2018 THII_3758 195a755b1678ce447ce037bf7abd7391 91 SMART SM00530 6 61 5.6E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_0598 ff10461178f84e7dacee46900866f4be 281 Gene3D G3DSA:3.40.50.300 1 265 2.1E-37 T 15-10-2018 THII_0598 ff10461178f84e7dacee46900866f4be 281 Pfam PF13469 Sulfotransferase family 5 215 5.3E-24 T 15-10-2018 THII_0598 ff10461178f84e7dacee46900866f4be 281 SUPERFAMILY SSF52540 3 227 1.86E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0650 afa1c9c20df9f6bcbbb4db51d860b2ad 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 38.873 T 15-10-2018 IPR003774 Protein of unknown function UPF0301 THII_0650 afa1c9c20df9f6bcbbb4db51d860b2ad 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 3.0E-50 T 15-10-2018 IPR003774 Protein of unknown function UPF0301 THII_0650 afa1c9c20df9f6bcbbb4db51d860b2ad 188 SUPERFAMILY SSF143456 6 187 8.24E-67 T 15-10-2018 THII_0650 afa1c9c20df9f6bcbbb4db51d860b2ad 188 Gene3D G3DSA:3.40.1740.10 3 188 1.5E-70 T 15-10-2018 THII_0021 210a8a7a9b1472109a7a37c8c2b9a70f 214 Pfam PF01553 Acyltransferase 25 157 4.1E-21 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 THII_0021 210a8a7a9b1472109a7a37c8c2b9a70f 214 SUPERFAMILY SSF69593 4 206 2.88E-29 T 15-10-2018 THII_0021 210a8a7a9b1472109a7a37c8c2b9a70f 214 SMART SM00563 39 160 1.8E-22 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 THII_3113 a9bed3502b882a0f49c4f7f813d4a829 235 SMART SM00382 36 223 8.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3113 a9bed3502b882a0f49c4f7f813d4a829 235 SUPERFAMILY SSF52540 7 230 1.22E-75 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3113 a9bed3502b882a0f49c4f7f813d4a829 235 Gene3D G3DSA:3.40.50.300 5 234 9.7E-66 T 15-10-2018 THII_3113 a9bed3502b882a0f49c4f7f813d4a829 235 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_3113 a9bed3502b882a0f49c4f7f813d4a829 235 Pfam PF00005 ABC transporter 27 175 7.7E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2074 b188a2640d1acab48adb34c387084506 280 SUPERFAMILY SSF54523 8 128 2.98E-7 T 15-10-2018 THII_2074 b188a2640d1acab48adb34c387084506 280 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2074 b188a2640d1acab48adb34c387084506 280 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 24 3.8E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2074 b188a2640d1acab48adb34c387084506 280 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_0522 597222c708fb951cad7786da3e7f905f 97 Pfam PF10387 Protein of unknown function (DUF2442) 5 76 1.3E-17 T 15-10-2018 IPR018841 Protein of unknown function DUF2442 THII_0522 597222c708fb951cad7786da3e7f905f 97 Gene3D G3DSA:3.30.2020.10 1 77 2.0E-8 T 15-10-2018 IPR036782 NE0471-like, N-terminal THII_0522 597222c708fb951cad7786da3e7f905f 97 SUPERFAMILY SSF143880 2 75 1.96E-19 T 15-10-2018 IPR036782 NE0471-like, N-terminal THII_0460 563234e8a7b528c0cd6ac4e0ef4cd7e9 686 SUPERFAMILY SSF49464 242 278 6.08E-6 T 15-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily THII_0460 563234e8a7b528c0cd6ac4e0ef4cd7e9 686 SUPERFAMILY SSF49464 284 321 4.05E-5 T 15-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily THII_0319 3c44f7799f1c0842cdbe923edb33e490 322 SUPERFAMILY SSF52540 58 274 2.24E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0319 3c44f7799f1c0842cdbe923edb33e490 322 Gene3D G3DSA:3.40.50.300 54 289 8.3E-18 T 15-10-2018 THII_2107 a9e3e45efed96bd812ad932c7fa5bd73 185 Pfam PF04279 Intracellular septation protein A 1 174 6.8E-67 T 15-10-2018 IPR006008 Intracellular septation protein A GO:0016021 THII_2107 a9e3e45efed96bd812ad932c7fa5bd73 185 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 177 18.805 T 15-10-2018 IPR006008 Intracellular septation protein A GO:0016021 THII_2107 a9e3e45efed96bd812ad932c7fa5bd73 185 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 3.6E-56 T 15-10-2018 IPR006008 Intracellular septation protein A GO:0016021 THII_1435 0126f1fbfc24404492ef380ff27db35d 519 Pfam PF13847 Methyltransferase domain 42 173 3.6E-12 T 15-10-2018 IPR025714 Methyltransferase domain THII_1435 0126f1fbfc24404492ef380ff27db35d 519 SUPERFAMILY SSF53335 20 166 5.42E-24 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1435 0126f1fbfc24404492ef380ff27db35d 519 Pfam PF10119 Predicted methyltransferase regulatory domain 214 296 6.3E-22 T 15-10-2018 IPR018773 Methyltransferase regulatory domain, predicted THII_1435 0126f1fbfc24404492ef380ff27db35d 519 Gene3D G3DSA:3.40.50.150 8 252 3.4E-19 T 15-10-2018 THII_1603 b842d69532ebbacc8f702314404d4de8 476 SUPERFAMILY SSF54001 310 403 3.04E-10 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily THII_1603 b842d69532ebbacc8f702314404d4de8 476 Pfam PF12914 SH3 domain of SH3b2 type 227 272 9.6E-10 T 15-10-2018 IPR026864 SH3b2-type SH3 domain THII_1603 b842d69532ebbacc8f702314404d4de8 476 Pfam PF00877 NlpC/P60 family 324 412 7.1E-8 T 15-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain THII_1603 b842d69532ebbacc8f702314404d4de8 476 Gene3D G3DSA:3.90.1720.10 294 465 8.6E-41 T 15-10-2018 THII_1603 b842d69532ebbacc8f702314404d4de8 476 PIRSF PIRSF019015 34 468 4.9E-129 T 15-10-2018 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type THII_1603 b842d69532ebbacc8f702314404d4de8 476 Pfam PF12913 SH3 domain (SH3b1 type) 171 219 5.9E-18 T 15-10-2018 IPR039439 SH3b1 domain THII_1603 b842d69532ebbacc8f702314404d4de8 476 Pfam PF12912 NLPC_P60 stabilising domain, N term 10 148 2.4E-23 T 15-10-2018 IPR025606 NLPC/P60, N-terminal domain THII_2877 0f7b9fffe509e4325261fbde07e5f478 415 SUPERFAMILY SSF51004 48 413 5.89E-73 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily THII_2877 0f7b9fffe509e4325261fbde07e5f478 415 Pfam PF02239 Cytochrome D1 heme domain 50 409 2.8E-111 T 15-10-2018 THII_2877 0f7b9fffe509e4325261fbde07e5f478 415 Gene3D G3DSA:2.140.10.20 46 414 8.1E-58 T 15-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily THII_1979 b64e6b0ccd95c0c7a3e69277271ce112 408 Gene3D G3DSA:1.20.81.30 61 174 2.1E-27 T 15-10-2018 THII_1979 b64e6b0ccd95c0c7a3e69277271ce112 408 Gene3D G3DSA:1.20.81.30 261 372 1.4E-30 T 15-10-2018 THII_1979 b64e6b0ccd95c0c7a3e69277271ce112 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 1.2E-15 T 15-10-2018 IPR003004 GspF/PilC family THII_1979 b64e6b0ccd95c0c7a3e69277271ce112 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.2E-15 T 15-10-2018 IPR003004 GspF/PilC family THII_1979 b64e6b0ccd95c0c7a3e69277271ce112 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 1.2E-15 T 15-10-2018 IPR003004 GspF/PilC family THII_1979 b64e6b0ccd95c0c7a3e69277271ce112 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.2E-15 T 15-10-2018 IPR003004 GspF/PilC family THII_1979 b64e6b0ccd95c0c7a3e69277271ce112 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 15-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 THII_1979 b64e6b0ccd95c0c7a3e69277271ce112 408 Pfam PF00482 Type II secretion system (T2SS), protein F 278 400 2.8E-33 T 15-10-2018 IPR018076 Type II secretion system F domain THII_1979 b64e6b0ccd95c0c7a3e69277271ce112 408 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 4.8E-29 T 15-10-2018 IPR018076 Type II secretion system F domain THII_0937 24f52f16d43747223e09430ec1fb771d 128 Gene3D G3DSA:3.40.50.2300 3 126 8.8E-45 T 15-10-2018 THII_0937 24f52f16d43747223e09430ec1fb771d 128 SUPERFAMILY SSF52172 8 125 1.42E-38 T 15-10-2018 IPR011006 CheY-like superfamily THII_0937 24f52f16d43747223e09430ec1fb771d 128 Pfam PF00072 Response regulator receiver domain 9 122 8.9E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0937 24f52f16d43747223e09430ec1fb771d 128 SMART SM00448 7 122 4.7E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1327 5974c6ebcd0d4a7f47e3bf86fd8fc844 702 Gene3D G3DSA:3.40.50.300 442 690 5.5E-34 T 15-10-2018 THII_1327 5974c6ebcd0d4a7f47e3bf86fd8fc844 702 SUPERFAMILY SSF52540 503 687 3.47E-19 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1466 1b0cddf0d3b35f6f2e5c66c2f1c25ce2 262 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 8 262 37.91 T 15-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 THII_1466 1b0cddf0d3b35f6f2e5c66c2f1c25ce2 262 Gene3D G3DSA:3.10.270.10 5 261 1.2E-100 T 15-10-2018 THII_1466 1b0cddf0d3b35f6f2e5c66c2f1c25ce2 262 Pfam PF02649 Type I GTP cyclohydrolase folE2 8 257 8.4E-98 T 15-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 THII_0204 19f7c11b3cd195419a3f0d2d7a3f1f71 258 Gene3D G3DSA:3.40.50.150 8 256 9.2E-28 T 15-10-2018 THII_0204 19f7c11b3cd195419a3f0d2d7a3f1f71 258 SUPERFAMILY SSF53335 1 252 2.61E-32 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0204 19f7c11b3cd195419a3f0d2d7a3f1f71 258 Pfam PF08241 Methyltransferase domain 46 140 2.4E-18 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 THII_0781 82cd4fb46219f449ce0de6a718e9be78 223 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_0781 82cd4fb46219f449ce0de6a718e9be78 223 Pfam PF00005 ABC transporter 18 165 1.8E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_0781 82cd4fb46219f449ce0de6a718e9be78 223 SMART SM00382 27 214 3.6E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0781 82cd4fb46219f449ce0de6a718e9be78 223 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 3.2E-87 T 15-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 THII_0781 82cd4fb46219f449ce0de6a718e9be78 223 SUPERFAMILY SSF52540 1 219 1.05E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0781 82cd4fb46219f449ce0de6a718e9be78 223 Gene3D G3DSA:3.40.50.300 1 222 3.4E-66 T 15-10-2018 THII_2390 7a4842143302b29fe34a51949bb9f979 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.6E-30 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 THII_2390 7a4842143302b29fe34a51949bb9f979 92 SUPERFAMILY SSF50182 7 69 3.97E-24 T 15-10-2018 IPR010920 LSM domain superfamily THII_2390 7a4842143302b29fe34a51949bb9f979 92 Gene3D G3DSA:2.30.30.100 1 80 1.8E-32 T 15-10-2018 THII_2390 7a4842143302b29fe34a51949bb9f979 92 Pfam PF17209 Hfq protein 7 69 3.5E-31 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 THII_2390 7a4842143302b29fe34a51949bb9f979 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.244 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 THII_3167 b3d51fffa4c9f3ad78577989122edf2c 59 Pfam PF04995 Heme exporter protein D (CcmD) 8 51 5.3E-16 T 15-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 THII_3167 b3d51fffa4c9f3ad78577989122edf2c 59 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 5 50 2.9E-17 T 15-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 THII_0466 ed8f489f3da2c4bd498333919747e2c7 77 SUPERFAMILY SSF143100 6 60 4.32E-13 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like THII_0466 ed8f489f3da2c4bd498333919747e2c7 77 Gene3D G3DSA:3.30.160.250 6 72 9.6E-8 T 15-10-2018 THII_0475 1bb926ef0c0b940ff4806221dcf81150 307 Gene3D G3DSA:3.10.25.10 207 307 1.2E-26 T 15-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_0475 1bb926ef0c0b940ff4806221dcf81150 307 SUPERFAMILY SSF50486 205 304 3.34E-27 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 THII_0475 1bb926ef0c0b940ff4806221dcf81150 307 Gene3D G3DSA:3.40.50.170 2 206 3.1E-82 T 15-10-2018 THII_0475 1bb926ef0c0b940ff4806221dcf81150 307 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 15-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_0475 1bb926ef0c0b940ff4806221dcf81150 307 Pfam PF02911 Formyl transferase, C-terminal domain 204 302 1.0E-23 T 15-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_0475 1bb926ef0c0b940ff4806221dcf81150 307 SUPERFAMILY SSF53328 2 204 3.92E-67 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_0475 1bb926ef0c0b940ff4806221dcf81150 307 Pfam PF00551 Formyl transferase 5 182 3.6E-47 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_0475 1bb926ef0c0b940ff4806221dcf81150 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 302 5.9E-92 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 THII_0475 1bb926ef0c0b940ff4806221dcf81150 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 305 36.588 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 THII_2099 a6ac7499272e56b0c4fa3fd44ac9dfe3 134 Pfam PF01809 Haemolytic domain 9 70 4.7E-11 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor THII_2099 a6ac7499272e56b0c4fa3fd44ac9dfe3 134 SMART SM01234 7 72 2.4E-5 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor THII_2406 a6af1ebfdb06346f302b953f235de2ac 234 Gene3D G3DSA:3.40.50.2300 2 134 4.3E-31 T 15-10-2018 THII_2406 a6af1ebfdb06346f302b953f235de2ac 234 Pfam PF00072 Response regulator receiver domain 5 116 1.6E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2406 a6af1ebfdb06346f302b953f235de2ac 234 SMART SM00862 154 227 5.3E-14 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_2406 a6af1ebfdb06346f302b953f235de2ac 234 SMART SM00448 3 116 1.5E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2406 a6af1ebfdb06346f302b953f235de2ac 234 Gene3D G3DSA:1.10.10.10 140 233 1.3E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2406 a6af1ebfdb06346f302b953f235de2ac 234 TIGRFAM TIGR03787 marine_sort_RR: proteobacterial dedicated sortase system response regulator 3 228 2.7E-117 T 15-10-2018 IPR022305 Sortase system response regulator THII_2406 a6af1ebfdb06346f302b953f235de2ac 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 226 3.2E-13 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_2406 a6af1ebfdb06346f302b953f235de2ac 234 SUPERFAMILY SSF52172 3 183 7.97E-35 T 15-10-2018 IPR011006 CheY-like superfamily THII_0742 2dc3928b283d03dfb6b66e962c5a11f7 386 SUPERFAMILY SSF52266 93 378 5.38E-18 T 15-10-2018 THII_0051 32b90c5e8f4f39aae8236756ed70ddb9 130 Pfam PF01627 Hpt domain 40 119 3.8E-11 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 THII_0051 32b90c5e8f4f39aae8236756ed70ddb9 130 SUPERFAMILY SSF47226 17 122 4.58E-20 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_0051 32b90c5e8f4f39aae8236756ed70ddb9 130 Gene3D G3DSA:1.20.120.160 16 125 1.5E-21 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_2802 3c6ca3e4e248116d0ebbfbaccb673442 319 Pfam PF00034 Cytochrome c 244 314 3.6E-4 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_2802 3c6ca3e4e248116d0ebbfbaccb673442 319 SUPERFAMILY SSF46626 227 314 5.11E-8 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2802 3c6ca3e4e248116d0ebbfbaccb673442 319 Gene3D G3DSA:1.10.760.10 213 319 4.2E-9 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_3482 2742d29f2560e300f360b5c80ca9d3ac 184 Pfam PF13344 Haloacid dehalogenase-like hydrolase 7 63 2.7E-6 T 15-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA THII_3482 2742d29f2560e300f360b5c80ca9d3ac 184 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 147 1.0E-45 T 15-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 THII_3482 2742d29f2560e300f360b5c80ca9d3ac 184 Gene3D G3DSA:3.40.50.1000 5 183 4.7E-56 T 15-10-2018 IPR023214 HAD superfamily THII_3482 2742d29f2560e300f360b5c80ca9d3ac 184 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 149 4.5E-37 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 THII_3482 2742d29f2560e300f360b5c80ca9d3ac 184 SUPERFAMILY SSF56784 2 177 5.47E-48 T 15-10-2018 IPR036412 HAD-like superfamily THII_3482 2742d29f2560e300f360b5c80ca9d3ac 184 PIRSF PIRSF004682 1 182 7.1E-57 T 15-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 THII_3482 2742d29f2560e300f360b5c80ca9d3ac 184 Pfam PF13242 HAD-hyrolase-like 101 158 2.5E-11 T 15-10-2018 THII_1808 b27e6ad437b6d13b4c36f37bd515dad7 522 Pfam PF11844 Domain of unknown function (DUF3364) 2 55 7.1E-20 T 15-10-2018 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 THII_1808 b27e6ad437b6d13b4c36f37bd515dad7 522 Gene3D G3DSA:3.40.50.1980 58 483 7.7E-185 T 15-10-2018 THII_1808 b27e6ad437b6d13b4c36f37bd515dad7 522 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 150 164 - T 15-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 THII_1808 b27e6ad437b6d13b4c36f37bd515dad7 522 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 69 500 9.9E-119 T 15-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 THII_1808 b27e6ad437b6d13b4c36f37bd515dad7 522 Gene3D G3DSA:3.40.50.1980 69 209 7.7E-185 T 15-10-2018 THII_1808 b27e6ad437b6d13b4c36f37bd515dad7 522 Gene3D G3DSA:1.20.89.10 320 506 7.7E-185 T 15-10-2018 THII_1808 b27e6ad437b6d13b4c36f37bd515dad7 522 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 522 4.1E-265 T 15-10-2018 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 THII_1808 b27e6ad437b6d13b4c36f37bd515dad7 522 SUPERFAMILY SSF53807 2 521 2.62E-169 T 15-10-2018 THII_1808 b27e6ad437b6d13b4c36f37bd515dad7 522 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 87 94 - T 15-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 THII_1808 b27e6ad437b6d13b4c36f37bd515dad7 522 Gene3D G3DSA:3.40.50.1980 210 490 7.7E-185 T 15-10-2018 THII_3361 670677a4538d849a852fb6e8469347ed 292 Pfam PF02629 CoA binding domain 7 99 1.6E-27 T 15-10-2018 IPR003781 CoA-binding GO:0048037 THII_3361 670677a4538d849a852fb6e8469347ed 292 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 290 41.409 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 THII_3361 670677a4538d849a852fb6e8469347ed 292 PIRSF PIRSF001553 1 291 1.4E-125 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 THII_3361 670677a4538d849a852fb6e8469347ed 292 SUPERFAMILY SSF52210 125 286 2.88E-54 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 THII_3361 670677a4538d849a852fb6e8469347ed 292 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 3.3E-38 T 15-10-2018 THII_3361 670677a4538d849a852fb6e8469347ed 292 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 3.3E-38 T 15-10-2018 THII_3361 670677a4538d849a852fb6e8469347ed 292 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 3.3E-38 T 15-10-2018 THII_3361 670677a4538d849a852fb6e8469347ed 292 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 3.3E-38 T 15-10-2018 THII_3361 670677a4538d849a852fb6e8469347ed 292 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 1.9E-136 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 THII_3361 670677a4538d849a852fb6e8469347ed 292 SUPERFAMILY SSF51735 1 124 1.31E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3361 670677a4538d849a852fb6e8469347ed 292 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 15-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site THII_3361 670677a4538d849a852fb6e8469347ed 292 SMART SM00881 4 100 8.3E-31 T 15-10-2018 IPR003781 CoA-binding GO:0048037 THII_3361 670677a4538d849a852fb6e8469347ed 292 Pfam PF00549 CoA-ligase 153 273 2.3E-21 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 THII_3361 670677a4538d849a852fb6e8469347ed 292 Gene3D G3DSA:3.40.50.261 126 290 9.4E-73 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 THII_3361 670677a4538d849a852fb6e8469347ed 292 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 15-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site THII_3361 670677a4538d849a852fb6e8469347ed 292 Gene3D G3DSA:3.40.50.720 2 125 1.8E-46 T 15-10-2018 THII_2698 64c49b66aa4c4bede47bdd079b84b2d7 199 Gene3D G3DSA:3.90.1570.10 3 188 5.5E-16 T 15-10-2018 THII_2698 64c49b66aa4c4bede47bdd079b84b2d7 199 SUPERFAMILY SSF52980 6 164 4.88E-20 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2698 64c49b66aa4c4bede47bdd079b84b2d7 199 Pfam PF05685 Putative restriction endonuclease 14 177 1.9E-31 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2187 f852a63b86bd7794b692712e5dcea101 459 Pfam PF00027 Cyclic nucleotide-binding domain 322 407 3.5E-8 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_2187 f852a63b86bd7794b692712e5dcea101 459 Gene3D G3DSA:2.30.30.60 132 187 3.5E-7 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily THII_2187 f852a63b86bd7794b692712e5dcea101 459 Gene3D G3DSA:2.60.120.10 290 430 4.9E-16 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_2187 f852a63b86bd7794b692712e5dcea101 459 Pfam PF00924 Mechanosensitive ion channel 75 225 6.6E-23 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 THII_2187 f852a63b86bd7794b692712e5dcea101 459 SUPERFAMILY SSF50182 116 186 7.19E-10 T 15-10-2018 IPR010920 LSM domain superfamily THII_2187 f852a63b86bd7794b692712e5dcea101 459 SUPERFAMILY SSF51206 241 423 4.06E-16 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like THII_3858 d25b23343750cc225c4b4fa66cb1ca6a 275 SUPERFAMILY SSF51905 13 256 1.23E-38 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3858 d25b23343750cc225c4b4fa66cb1ca6a 275 Pfam PF00890 FAD binding domain 18 273 2.5E-35 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_3858 d25b23343750cc225c4b4fa66cb1ca6a 275 Gene3D G3DSA:3.50.50.60 18 273 2.0E-55 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1266 518d0adff877a0c2ebbca31a5e83c97b 363 SUPERFAMILY SSF102114 33 330 1.7E-44 T 15-10-2018 THII_1266 518d0adff877a0c2ebbca31a5e83c97b 363 Pfam PF13186 Iron-sulfur cluster-binding domain 281 332 1.5E-8 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain THII_1266 518d0adff877a0c2ebbca31a5e83c97b 363 Pfam PF04055 Radical SAM superfamily 40 173 4.2E-13 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_1266 518d0adff877a0c2ebbca31a5e83c97b 363 Gene3D G3DSA:3.20.20.70 30 336 2.4E-42 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_1266 518d0adff877a0c2ebbca31a5e83c97b 363 PIRSF PIRSF037420 25 346 1.6E-33 T 15-10-2018 IPR017200 Coenzyme PQQ synthesis protein E THII_1266 518d0adff877a0c2ebbca31a5e83c97b 363 Pfam PF13394 4Fe-4S single cluster domain 41 123 3.3E-5 T 15-10-2018 THII_1713 336790772329f81f2db4e571f480d1f9 378 Pfam PF13353 4Fe-4S single cluster domain 43 165 5.0E-5 T 15-10-2018 THII_1713 336790772329f81f2db4e571f480d1f9 378 SUPERFAMILY SSF102114 31 341 2.75E-36 T 15-10-2018 THII_1713 336790772329f81f2db4e571f480d1f9 378 Pfam PF04055 Radical SAM superfamily 42 206 2.4E-11 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_1713 336790772329f81f2db4e571f480d1f9 378 Pfam PF13186 Iron-sulfur cluster-binding domain 280 339 1.7E-7 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain THII_1713 336790772329f81f2db4e571f480d1f9 378 Gene3D G3DSA:3.20.20.70 29 335 2.1E-38 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0694 4fba351db3f9406eb10f7400741eff11 465 Pfam PF08245 Mur ligase middle domain 109 292 6.2E-23 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 THII_0694 4fba351db3f9406eb10f7400741eff11 465 SUPERFAMILY SSF51984 1 91 5.89E-23 T 15-10-2018 THII_0694 4fba351db3f9406eb10f7400741eff11 465 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.7E-210 T 15-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 THII_0694 4fba351db3f9406eb10f7400741eff11 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 361 6.5E-10 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 THII_0694 4fba351db3f9406eb10f7400741eff11 465 SUPERFAMILY SSF53244 313 447 1.96E-34 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_0694 4fba351db3f9406eb10f7400741eff11 465 Gene3D G3DSA:3.90.190.20 316 451 8.8E-29 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_0694 4fba351db3f9406eb10f7400741eff11 465 Pfam PF01225 Mur ligase family, catalytic domain 2 103 2.2E-19 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 THII_0694 4fba351db3f9406eb10f7400741eff11 465 Gene3D G3DSA:3.40.50.720 1 91 1.8E-34 T 15-10-2018 THII_0694 4fba351db3f9406eb10f7400741eff11 465 SUPERFAMILY SSF53623 96 310 3.01E-52 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_0694 4fba351db3f9406eb10f7400741eff11 465 Gene3D G3DSA:3.40.1190.10 92 315 5.2E-60 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_0694 4fba351db3f9406eb10f7400741eff11 465 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 57.101 T 15-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 Pfam PF00512 His Kinase A (phospho-acceptor) domain 159 226 1.1E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 Gene3D G3DSA:1.10.287.130 145 224 2.1E-13 T 15-10-2018 THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 SMART SM00448 5 118 2.0E-41 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 SMART SM00387 271 383 2.9E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 Gene3D G3DSA:3.40.50.2300 1 139 4.2E-39 T 15-10-2018 THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 Gene3D G3DSA:3.30.565.10 225 381 1.5E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 SUPERFAMILY SSF52172 7 152 7.4E-41 T 15-10-2018 IPR011006 CheY-like superfamily THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 SUPERFAMILY SSF47384 144 227 1.94E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 382 4.5E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 SMART SM00388 158 226 1.1E-9 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 SUPERFAMILY SSF55874 216 381 8.79E-42 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 Pfam PF00072 Response regulator receiver domain 7 118 4.7E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 322 7.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 361 7.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3833 583562b29e3a32529caf2ed23ca52dbb 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 380 7.5E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2986 f5c7874c8298f8a70ffef6465aba8a53 94 Gene3D G3DSA:3.30.70.1290 1 90 6.3E-29 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_2986 f5c7874c8298f8a70ffef6465aba8a53 94 Pfam PF01797 Transposase IS200 like 2 83 2.1E-25 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_2986 f5c7874c8298f8a70ffef6465aba8a53 94 SMART SM01321 1 83 5.1E-11 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_2986 f5c7874c8298f8a70ffef6465aba8a53 94 SUPERFAMILY SSF143422 2 84 5.76E-28 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_3960 5eeb3710e7340c1dd5aad6b73675a8ac 66 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 17 45 1.5E-6 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_1680 415624e1fef7e5fe0ba22b7f714f08c5 89 Gene3D G3DSA:3.30.2310.20 4 85 8.5E-9 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1680 415624e1fef7e5fe0ba22b7f714f08c5 89 SUPERFAMILY SSF143011 5 79 6.02E-10 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1920 92c8807049253da52d9c5d663769b22e 214 Gene3D G3DSA:3.40.50.2020 1 213 6.8E-72 T 15-10-2018 THII_1920 92c8807049253da52d9c5d663769b22e 214 Pfam PF00156 Phosphoribosyl transferase domain 41 165 3.2E-15 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 THII_1920 92c8807049253da52d9c5d663769b22e 214 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 214 32.062 T 15-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_1920 92c8807049253da52d9c5d663769b22e 214 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 12 186 4.8E-61 T 15-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 THII_1920 92c8807049253da52d9c5d663769b22e 214 SUPERFAMILY SSF53271 2 196 1.39E-47 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like THII_3334 9b52c32d6f4797c97bba435e32fd9fa2 728 Gene3D G3DSA:2.60.40.10 298 398 3.9E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3334 9b52c32d6f4797c97bba435e32fd9fa2 728 Gene3D G3DSA:2.60.40.10 420 528 4.0E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3334 9b52c32d6f4797c97bba435e32fd9fa2 728 Gene3D G3DSA:2.60.120.200 24 287 8.2E-38 T 15-10-2018 THII_3334 9b52c32d6f4797c97bba435e32fd9fa2 728 SUPERFAMILY SSF49899 27 282 6.94E-26 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily THII_3334 9b52c32d6f4797c97bba435e32fd9fa2 728 Pfam PF00139 Legume lectin domain 26 282 1.2E-15 T 15-10-2018 IPR001220 Legume lectin domain GO:0030246 THII_3334 9b52c32d6f4797c97bba435e32fd9fa2 728 ProSitePatterns PS00307 Legume lectins beta-chain signature. 152 158 - T 15-10-2018 IPR019825 Legume lectin, beta chain, Mn/Ca-binding site Reactome: R-HSA-196791|Reactome: R-HSA-8856825|Reactome: R-HSA-8856828|Reactome: R-HSA-975634 THII_3334 9b52c32d6f4797c97bba435e32fd9fa2 728 Pfam PF07610 Protein of unknown function (DUF1573) 304 384 4.6E-7 T 15-10-2018 IPR011467 Protein of unknown function DUF1573 THII_3334 9b52c32d6f4797c97bba435e32fd9fa2 728 Pfam PF07610 Protein of unknown function (DUF1573) 429 527 1.4E-4 T 15-10-2018 IPR011467 Protein of unknown function DUF1573 THII_2726 51f34f42bc598e445db60c548471fc07 179 SMART SM00738 2 113 1.3E-43 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 THII_2726 51f34f42bc598e445db60c548471fc07 179 SUPERFAMILY SSF50104 123 178 8.28E-19 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily THII_2726 51f34f42bc598e445db60c548471fc07 179 SMART SM00739 125 152 4.6E-7 T 15-10-2018 IPR005824 KOW THII_2726 51f34f42bc598e445db60c548471fc07 179 Gene3D G3DSA:2.30.30.30 120 178 1.3E-24 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 THII_2726 51f34f42bc598e445db60c548471fc07 179 SUPERFAMILY SSF82679 4 116 5.1E-36 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 THII_2726 51f34f42bc598e445db60c548471fc07 179 PRINTS PR00338 Transcription termination factor NUSG signature 155 171 1.9E-19 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 THII_2726 51f34f42bc598e445db60c548471fc07 179 PRINTS PR00338 Transcription termination factor NUSG signature 59 71 1.9E-19 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 THII_2726 51f34f42bc598e445db60c548471fc07 179 PRINTS PR00338 Transcription termination factor NUSG signature 137 152 1.9E-19 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 THII_2726 51f34f42bc598e445db60c548471fc07 179 Gene3D G3DSA:3.30.70.940 1 119 4.4E-44 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 THII_2726 51f34f42bc598e445db60c548471fc07 179 Pfam PF02357 Transcription termination factor nusG 4 110 2.4E-27 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 THII_2726 51f34f42bc598e445db60c548471fc07 179 Pfam PF00467 KOW motif 128 158 1.5E-8 T 15-10-2018 IPR005824 KOW THII_2726 51f34f42bc598e445db60c548471fc07 179 ProSitePatterns PS01014 Transcription termination factor nusG signature. 162 171 - T 15-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site THII_2726 51f34f42bc598e445db60c548471fc07 179 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 178 2.6E-66 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 THII_2726 51f34f42bc598e445db60c548471fc07 179 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 179 23.177 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 THII_3311 8503227e09c0ba84f0fb847343a7f935 473 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 189 197 - T 15-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_3311 8503227e09c0ba84f0fb847343a7f935 473 Gene3D G3DSA:3.20.20.110 143 473 6.5E-154 T 15-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_3311 8503227e09c0ba84f0fb847343a7f935 473 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 2 468 60.444 T 15-10-2018 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_3311 8503227e09c0ba84f0fb847343a7f935 473 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 147 455 1.3E-131 T 15-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_3311 8503227e09c0ba84f0fb847343a7f935 473 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 16 137 1.3E-44 T 15-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_3311 8503227e09c0ba84f0fb847343a7f935 473 SUPERFAMILY SSF51649 142 466 1.57E-143 T 15-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_3311 8503227e09c0ba84f0fb847343a7f935 473 SUPERFAMILY SSF54966 3 140 7.07E-56 T 15-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_3311 8503227e09c0ba84f0fb847343a7f935 473 Gene3D G3DSA:3.30.70.150 15 140 1.8E-48 T 15-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 THII_1426 d327b0f3da390c3f6b0c9f652267e791 62 Gene3D G3DSA:2.20.25.10 8 62 1.8E-27 T 15-10-2018 THII_1426 d327b0f3da390c3f6b0c9f652267e791 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 28.245 T 15-10-2018 IPR038053 Uncharacterised protein family UPF0434 THII_1426 d327b0f3da390c3f6b0c9f652267e791 62 Pfam PF03966 Trm112p-like protein 2 41 2.4E-9 T 15-10-2018 IPR005651 Trm112-like THII_1426 d327b0f3da390c3f6b0c9f652267e791 62 SUPERFAMILY SSF158997 1 55 1.06E-21 T 15-10-2018 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 Gene3D G3DSA:3.40.190.10 6 210 1.6E-84 T 15-10-2018 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 Gene3D G3DSA:3.40.190.10 103 202 1.6E-84 T 15-10-2018 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 3.7E-79 T 15-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 SUPERFAMILY SSF53850 5 218 7.06E-84 T 15-10-2018 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.9E-111 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 Gene3D G3DSA:3.30.160.40 222 305 6.4E-24 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 SUPERFAMILY SSF54782 220 307 9.94E-24 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 38.685 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 227 295 4.2E-17 T 15-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 15-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 PIRSF PIRSF001438 1 309 1.8E-118 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 6.7E-50 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 6.7E-50 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 6.7E-50 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 6.7E-50 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3233 922e59c4503d6be9a30c1ce1b8ab74f3 310 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 6.7E-50 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 THII_3185 ebfdba6aec02f2b34f95e1292182ae7e 420 Pfam PF16325 Peptidase family U32 C-terminal domain 333 404 7.4E-19 T 15-10-2018 IPR032525 Peptidase family U32, C-terminal THII_3185 ebfdba6aec02f2b34f95e1292182ae7e 420 Pfam PF01136 Peptidase family U32 77 319 3.3E-98 T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 THII_3185 ebfdba6aec02f2b34f95e1292182ae7e 420 Gene3D G3DSA:2.40.30.10 330 410 2.3E-11 T 15-10-2018 THII_3185 ebfdba6aec02f2b34f95e1292182ae7e 420 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 THII_1893 df10d4bc9c3d65e329b2a8df4f7a8f2a 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 176 2.8E-30 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 THII_1893 df10d4bc9c3d65e329b2a8df4f7a8f2a 187 SUPERFAMILY SSF88659 91 179 1.08E-14 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_1893 df10d4bc9c3d65e329b2a8df4f7a8f2a 187 SUPERFAMILY SSF88946 4 107 4.08E-30 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 THII_1893 df10d4bc9c3d65e329b2a8df4f7a8f2a 187 Gene3D G3DSA:1.10.10.10 117 181 9.4E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1893 df10d4bc9c3d65e329b2a8df4f7a8f2a 187 Pfam PF04542 Sigma-70 region 2 25 92 2.0E-20 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 THII_1893 df10d4bc9c3d65e329b2a8df4f7a8f2a 187 Gene3D G3DSA:1.10.1740.10 1 116 5.2E-29 T 15-10-2018 THII_1893 df10d4bc9c3d65e329b2a8df4f7a8f2a 187 Pfam PF08281 Sigma-70, region 4 121 172 6.9E-13 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 THII_3073 95fff18cd15dd600d848ce1138f207e5 258 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 209 2.4E-25 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 THII_3073 95fff18cd15dd600d848ce1138f207e5 258 SUPERFAMILY SSF53790 4 249 1.13E-28 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 THII_3073 95fff18cd15dd600d848ce1138f207e5 258 Gene3D G3DSA:3.40.1010.10 1 122 9.5E-19 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 THII_1290 7eb90fe0a285e085ec5abefac9dd344f 437 Pfam PF08886 Glutamate-cysteine ligase 29 432 7.8E-187 T 15-10-2018 IPR011718 Glutamate--cysteine ligase GshA THII_1290 7eb90fe0a285e085ec5abefac9dd344f 437 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 30 434 8.4E-176 T 15-10-2018 IPR011718 Glutamate--cysteine ligase GshA THII_1290 7eb90fe0a285e085ec5abefac9dd344f 437 Gene3D G3DSA:3.40.50.11280 77 215 7.0E-45 T 15-10-2018 THII_3515 db1a81036e730deee433fd62b06e6965 628 Gene3D G3DSA:3.30.1390.30 86 161 1.2E-50 T 15-10-2018 THII_3515 db1a81036e730deee433fd62b06e6965 628 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 618 50.35 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_3515 db1a81036e730deee433fd62b06e6965 628 Pfam PF00905 Penicillin binding protein transpeptidase domain 269 611 3.1E-70 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 THII_3515 db1a81036e730deee433fd62b06e6965 628 Gene3D G3DSA:3.90.1310.10 65 245 1.2E-50 T 15-10-2018 THII_3515 db1a81036e730deee433fd62b06e6965 628 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 234 1.0E-45 T 15-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 THII_3515 db1a81036e730deee433fd62b06e6965 628 Gene3D G3DSA:3.40.710.10 246 625 2.6E-96 T 15-10-2018 THII_3515 db1a81036e730deee433fd62b06e6965 628 SUPERFAMILY SSF56519 57 249 9.94E-52 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 THII_3515 db1a81036e730deee433fd62b06e6965 628 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 615 3.7E-230 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 THII_3515 db1a81036e730deee433fd62b06e6965 628 SUPERFAMILY SSF56601 251 616 1.39E-96 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like THII_3449 eea2cd3a33b6dbd4b765ce37994ce15c 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 235 1.5E-21 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_3449 eea2cd3a33b6dbd4b765ce37994ce15c 239 SUPERFAMILY SSF46894 135 236 5.95E-27 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 THII_3449 eea2cd3a33b6dbd4b765ce37994ce15c 239 Pfam PF00072 Response regulator receiver domain 9 118 4.4E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3449 eea2cd3a33b6dbd4b765ce37994ce15c 239 SMART SM00862 159 235 7.4E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_3449 eea2cd3a33b6dbd4b765ce37994ce15c 239 SUPERFAMILY SSF52172 5 127 3.27E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_3449 eea2cd3a33b6dbd4b765ce37994ce15c 239 SMART SM00448 6 117 9.5E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3449 eea2cd3a33b6dbd4b765ce37994ce15c 239 Gene3D G3DSA:1.10.10.10 130 239 1.2E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3449 eea2cd3a33b6dbd4b765ce37994ce15c 239 Gene3D G3DSA:3.40.50.2300 1 129 6.0E-35 T 15-10-2018 THII_0376 b68b52db661fbf3e745cfcc44c679d6c 217 Pfam PF05685 Putative restriction endonuclease 27 170 1.3E-15 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0376 b68b52db661fbf3e745cfcc44c679d6c 217 SUPERFAMILY SSF52980 27 167 4.45E-6 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1182 b8c7803e381b7459c61e358180214425 146 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 49 141 5.3E-10 T 15-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 THII_1182 b8c7803e381b7459c61e358180214425 146 Gene3D G3DSA:1.20.120.330 29 144 9.0E-10 T 15-10-2018 THII_1182 b8c7803e381b7459c61e358180214425 146 SUPERFAMILY SSF81593 38 140 3.57E-17 T 15-10-2018 THII_2708 e5252762042f0dff303093cdd236efc9 211 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 57 71 1.1E-8 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_2708 e5252762042f0dff303093cdd236efc9 211 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 105 125 1.1E-8 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 THII_2708 e5252762042f0dff303093cdd236efc9 211 SUPERFAMILY SSF53335 34 203 8.36E-31 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2708 e5252762042f0dff303093cdd236efc9 211 Pfam PF01555 DNA methylase 59 198 2.4E-24 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 THII_2708 e5252762042f0dff303093cdd236efc9 211 Gene3D G3DSA:3.40.50.150 35 208 1.9E-31 T 15-10-2018 THII_2708 e5252762042f0dff303093cdd236efc9 211 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 61 67 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 THII_2319 d4f91147b4186ef62674acf10f697450 293 Gene3D G3DSA:1.10.760.10 72 193 5.8E-5 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2319 d4f91147b4186ef62674acf10f697450 293 SUPERFAMILY SSF46626 203 292 7.86E-11 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2319 d4f91147b4186ef62674acf10f697450 293 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 213 286 1.2E-6 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_2319 d4f91147b4186ef62674acf10f697450 293 SUPERFAMILY SSF46626 81 191 7.68E-8 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2319 d4f91147b4186ef62674acf10f697450 293 Gene3D G3DSA:1.10.760.10 196 293 3.3E-11 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1229 393b8a4540eb8e4d96e5a2b848b54f84 124 Gene3D G3DSA:1.10.1660.10 1 59 1.5E-8 T 15-10-2018 THII_1229 393b8a4540eb8e4d96e5a2b848b54f84 124 Pfam PF00239 Resolvase, N terminal domain 60 120 4.2E-6 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 THII_1229 393b8a4540eb8e4d96e5a2b848b54f84 124 Gene3D G3DSA:3.40.50.1390 60 124 6.4E-9 T 15-10-2018 THII_1229 393b8a4540eb8e4d96e5a2b848b54f84 124 Pfam PF13411 MerR HTH family regulatory protein 4 58 1.5E-9 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 THII_1229 393b8a4540eb8e4d96e5a2b848b54f84 124 SUPERFAMILY SSF46955 4 68 1.1E-9 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily THII_1229 393b8a4540eb8e4d96e5a2b848b54f84 124 SUPERFAMILY SSF53041 59 119 1.44E-6 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 THII_2378 db436565562f2b52de4010dea1795e18 143 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 82 99 - T 15-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site THII_2378 db436565562f2b52de4010dea1795e18 143 Pfam PF00027 Cyclic nucleotide-binding domain 35 119 7.8E-20 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_2378 db436565562f2b52de4010dea1795e18 143 Gene3D G3DSA:2.60.120.10 4 143 1.1E-34 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_2378 db436565562f2b52de4010dea1795e18 143 SUPERFAMILY SSF51206 10 138 1.57E-32 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like THII_2378 db436565562f2b52de4010dea1795e18 143 SMART SM00100 15 132 6.4E-18 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain THII_2366 0c68bbdbecb6066e26aff6113cf88fcc 335 SUPERFAMILY SSF56112 5 314 3.06E-53 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily THII_2366 0c68bbdbecb6066e26aff6113cf88fcc 335 Gene3D G3DSA:3.90.1200.10 92 331 5.6E-76 T 15-10-2018 THII_2366 0c68bbdbecb6066e26aff6113cf88fcc 335 Gene3D G3DSA:3.30.200.20 1 91 2.5E-21 T 15-10-2018 THII_2366 0c68bbdbecb6066e26aff6113cf88fcc 335 Pfam PF01636 Phosphotransferase enzyme family 25 242 1.5E-29 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase THII_3780 85224327faee6b6baa3e2d84a28f9f31 364 SUPERFAMILY SSF51261 119 353 1.73E-42 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_3780 85224327faee6b6baa3e2d84a28f9f31 364 Gene3D G3DSA:2.70.70.10 222 354 3.1E-34 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_3780 85224327faee6b6baa3e2d84a28f9f31 364 Pfam PF01551 Peptidase family M23 256 349 8.9E-25 T 15-10-2018 IPR016047 Peptidase M23 THII_2113 34058776b13518a670c1e77a536457b2 144 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 139 1.2E-62 T 15-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2113 34058776b13518a670c1e77a536457b2 144 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 15-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 THII_2113 34058776b13518a670c1e77a536457b2 144 Pfam PF00572 Ribosomal protein L13 15 137 1.6E-55 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 THII_2113 34058776b13518a670c1e77a536457b2 144 SUPERFAMILY SSF52161 1 138 4.45E-59 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 THII_2113 34058776b13518a670c1e77a536457b2 144 PIRSF PIRSF002181 1 140 1.2E-50 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 THII_2113 34058776b13518a670c1e77a536457b2 144 Gene3D G3DSA:3.90.1180.10 1 141 6.8E-61 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 THII_2113 34058776b13518a670c1e77a536457b2 144 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 139 28.301 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 THII_0492 71510b1e685e9461475dc8df41b39f2b 513 Pfam PF00072 Response regulator receiver domain 10 121 4.6E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0492 71510b1e685e9461475dc8df41b39f2b 513 Pfam PF00158 Sigma-54 interaction domain 186 352 1.3E-60 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 THII_0492 71510b1e685e9461475dc8df41b39f2b 513 SMART SM00448 8 121 1.5E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0492 71510b1e685e9461475dc8df41b39f2b 513 SUPERFAMILY SSF46785 457 510 3.34E-5 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_0492 71510b1e685e9461475dc8df41b39f2b 513 SMART SM00382 206 349 8.3E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0492 71510b1e685e9461475dc8df41b39f2b 513 SUPERFAMILY SSF52540 186 428 1.27E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0492 71510b1e685e9461475dc8df41b39f2b 513 SUPERFAMILY SSF52172 9 228 1.99E-41 T 15-10-2018 IPR011006 CheY-like superfamily THII_0492 71510b1e685e9461475dc8df41b39f2b 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 210 223 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THII_0492 71510b1e685e9461475dc8df41b39f2b 513 Gene3D G3DSA:1.10.8.60 358 434 2.9E-22 T 15-10-2018 THII_0492 71510b1e685e9461475dc8df41b39f2b 513 Gene3D G3DSA:3.40.50.2300 6 146 7.2E-37 T 15-10-2018 THII_0492 71510b1e685e9461475dc8df41b39f2b 513 Gene3D G3DSA:3.40.50.300 173 357 1.7E-56 T 15-10-2018 THII_0492 71510b1e685e9461475dc8df41b39f2b 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 272 287 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_0814 ba777642846faaa7fa39e1954ca6c59b 207 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 11 195 1.5E-50 T 15-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 THII_0814 ba777642846faaa7fa39e1954ca6c59b 207 Gene3D G3DSA:3.90.79.10 3 205 1.4E-58 T 15-10-2018 THII_0814 ba777642846faaa7fa39e1954ca6c59b 207 SUPERFAMILY SSF55811 10 201 1.49E-41 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 THII_0814 ba777642846faaa7fa39e1954ca6c59b 207 ProSitePatterns PS00893 Nudix box signature. 93 114 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 THII_0814 ba777642846faaa7fa39e1954ca6c59b 207 Pfam PF00293 NUDIX domain 53 185 5.4E-10 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 THII_1716 e6ff03a0037eceaacee0f52c6f585179 420 PIRSF PIRSF000139 6 412 5.4E-108 T 15-10-2018 THII_1716 e6ff03a0037eceaacee0f52c6f585179 420 Pfam PF02754 Cysteine-rich domain 172 251 1.3E-7 T 15-10-2018 IPR004017 Cysteine-rich domain THII_1716 e6ff03a0037eceaacee0f52c6f585179 420 Pfam PF02754 Cysteine-rich domain 305 389 3.5E-10 T 15-10-2018 IPR004017 Cysteine-rich domain THII_1716 e6ff03a0037eceaacee0f52c6f585179 420 Pfam PF13183 4Fe-4S dicluster domain 22 89 8.2E-12 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_1716 e6ff03a0037eceaacee0f52c6f585179 420 SUPERFAMILY SSF54862 19 117 3.39E-20 T 15-10-2018 THII_1716 e6ff03a0037eceaacee0f52c6f585179 420 Gene3D G3DSA:3.30.70.20 17 96 3.5E-6 T 15-10-2018 THII_1716 e6ff03a0037eceaacee0f52c6f585179 420 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2645 42bf4c394d339a94006d1d31092a0fe8 154 Pfam PF01724 Domain of unknown function DUF29 8 153 9.4E-49 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2645 42bf4c394d339a94006d1d31092a0fe8 154 Gene3D G3DSA:1.20.1220.20 2 154 3.9E-27 T 15-10-2018 THII_3017 c63148a42d1d7b5ad09733c744608d82 245 SUPERFAMILY SSF51735 3 243 3.95E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3017 c63148a42d1d7b5ad09733c744608d82 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.4E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3017 c63148a42d1d7b5ad09733c744608d82 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.4E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3017 c63148a42d1d7b5ad09733c744608d82 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.4E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3017 c63148a42d1d7b5ad09733c744608d82 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.4E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3017 c63148a42d1d7b5ad09733c744608d82 245 Pfam PF00106 short chain dehydrogenase 3 192 2.8E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3017 c63148a42d1d7b5ad09733c744608d82 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 THII_3017 c63148a42d1d7b5ad09733c744608d82 245 Gene3D G3DSA:3.40.50.720 2 244 1.0E-48 T 15-10-2018 THII_2716 4d9aa19fedcc83c3e381905de645266f 409 SUPERFAMILY SSF53067 141 242 3.24E-7 T 15-10-2018 THII_2716 4d9aa19fedcc83c3e381905de645266f 409 PIRSF PIRSF015761 8 407 1.3E-32 T 15-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 THII_2716 4d9aa19fedcc83c3e381905de645266f 409 SUPERFAMILY SSF53067 5 139 5.44E-27 T 15-10-2018 THII_2716 4d9aa19fedcc83c3e381905de645266f 409 Gene3D G3DSA:3.30.420.380 6 241 4.6E-40 T 15-10-2018 THII_2716 4d9aa19fedcc83c3e381905de645266f 409 Pfam PF05134 Type II secretion system (T2SS), protein L 6 243 1.2E-37 T 15-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain THII_2716 4d9aa19fedcc83c3e381905de645266f 409 Gene3D G3DSA:3.30.1360.100 322 408 1.1E-9 T 15-10-2018 THII_2716 4d9aa19fedcc83c3e381905de645266f 409 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 402 1.9E-59 T 15-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 THII_2716 4d9aa19fedcc83c3e381905de645266f 409 Pfam PF12693 GspL periplasmic domain 251 406 1.6E-25 T 15-10-2018 IPR025691 GspL periplasmic domain THII_2716 4d9aa19fedcc83c3e381905de645266f 409 Gene3D G3DSA:3.30.420.370 137 218 4.6E-40 T 15-10-2018 THII_3155 61d5f59071d4f1a74d9c8196b8c5ee3c 101 SUPERFAMILY SSF51126 4 96 6.91E-8 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0487 c9945df7ca0115cb4bef4bd727eb4163 221 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_0487 c9945df7ca0115cb4bef4bd727eb4163 221 Gene3D G3DSA:3.40.50.300 1 221 5.2E-66 T 15-10-2018 THII_0487 c9945df7ca0115cb4bef4bd727eb4163 221 SUPERFAMILY SSF52540 1 220 4.31E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0487 c9945df7ca0115cb4bef4bd727eb4163 221 SMART SM00382 30 219 7.0E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0487 c9945df7ca0115cb4bef4bd727eb4163 221 Pfam PF00005 ABC transporter 21 170 7.5E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 PRINTS PR00046 Major sigma-70 factor signature 234 246 8.0E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 PRINTS PR00046 Major sigma-70 factor signature 253 268 8.0E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 PRINTS PR00046 Major sigma-70 factor signature 268 279 8.0E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 PRINTS PR00046 Major sigma-70 factor signature 79 92 8.0E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 4 285 50.214 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 79 92 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 SUPERFAMILY SSF88659 191 282 8.6E-19 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 PIRSF PIRSF000770 2 285 1.1E-33 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 Pfam PF04545 Sigma-70, region 4 230 281 5.9E-16 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 Pfam PF04542 Sigma-70 region 2 55 124 3.5E-17 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 51 282 2.7E-33 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 SUPERFAMILY SSF88946 15 124 8.48E-40 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 17 283 3.8E-123 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 Gene3D G3DSA:1.10.601.10 11 124 1.1E-28 T 15-10-2018 THII_2365 11f3bdca09827a620ffcae1f6a01679a 286 Gene3D G3DSA:1.20.140.160 132 284 5.2E-15 T 15-10-2018 THII_1432 93d5976f3626cf7c30b335eb55124060 164 Gene3D G3DSA:3.40.220.10 6 163 2.5E-5 T 15-10-2018 THII_1432 93d5976f3626cf7c30b335eb55124060 164 SUPERFAMILY SSF52949 57 161 7.65E-8 T 15-10-2018 THII_1797 9bb662178d16c257135f0753f2db06ae 166 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 6 161 22.505 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 THII_1797 9bb662178d16c257135f0753f2db06ae 166 Pfam PF02130 Uncharacterized protein family UPF0054 44 155 6.6E-34 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 THII_1797 9bb662178d16c257135f0753f2db06ae 166 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 127 137 - T 15-10-2018 IPR020549 Endoribonuclease YbeY, conserved site THII_1797 9bb662178d16c257135f0753f2db06ae 166 SUPERFAMILY SSF55486 48 164 3.17E-44 T 15-10-2018 THII_1797 9bb662178d16c257135f0753f2db06ae 166 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 53 157 2.3E-33 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 THII_1797 9bb662178d16c257135f0753f2db06ae 166 Gene3D G3DSA:3.40.390.30 4 165 2.7E-49 T 15-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 THII_0349 215cb4df0db984d353b3b687fdecadbf 147 Pfam PF00011 Hsp20/alpha crystallin family 45 145 8.5E-27 T 15-10-2018 IPR002068 Alpha crystallin/Hsp20 domain THII_0349 215cb4df0db984d353b3b687fdecadbf 147 Gene3D G3DSA:2.60.40.790 2 146 7.1E-40 T 15-10-2018 IPR008978 HSP20-like chaperone THII_0349 215cb4df0db984d353b3b687fdecadbf 147 SUPERFAMILY SSF49764 22 146 2.03E-42 T 15-10-2018 IPR008978 HSP20-like chaperone THII_1136 4db0a9956e38dccf06ffdbe1b7391f2c 213 SUPERFAMILY SSF52980 26 168 4.93E-5 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1136 4db0a9956e38dccf06ffdbe1b7391f2c 213 Pfam PF05685 Putative restriction endonuclease 30 172 8.1E-17 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2676 80eb801a57b4557ccf7e73e3e6b5d946 299 Pfam PF01136 Peptidase family U32 85 293 8.4E-19 T 15-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 THII_0419 3650826e49cd7b24c46d639a322eb3ad 237 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 5 232 39.238 T 15-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 THII_0419 3650826e49cd7b24c46d639a322eb3ad 237 SUPERFAMILY SSF55729 78 233 2.73E-23 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_0419 3650826e49cd7b24c46d639a322eb3ad 237 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 15 85 1.6E-17 T 15-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 THII_0419 3650826e49cd7b24c46d639a322eb3ad 237 PIRSF PIRSF037208 1 237 2.4E-88 T 15-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 THII_0419 3650826e49cd7b24c46d639a322eb3ad 237 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 225 6.3E-38 T 15-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SUPERFAMILY SSF48452 28 182 6.19E-22 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Gene3D G3DSA:1.25.40.10 10 225 3.3E-48 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Pfam PF13424 Tetratricopeptide repeat 42 99 1.6E-7 T 15-10-2018 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Pfam PF13424 Tetratricopeptide repeat 110 178 1.7E-12 T 15-10-2018 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Pfam PF13424 Tetratricopeptide repeat 190 258 4.5E-17 T 15-10-2018 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Pfam PF13424 Tetratricopeptide repeat 508 575 3.0E-10 T 15-10-2018 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Pfam PF13424 Tetratricopeptide repeat 348 418 7.8E-17 T 15-10-2018 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Pfam PF13424 Tetratricopeptide repeat 268 337 2.8E-15 T 15-10-2018 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Pfam PF13424 Tetratricopeptide repeat 430 497 1.9E-8 T 15-10-2018 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SUPERFAMILY SSF48452 470 646 1.27E-22 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SUPERFAMILY SSF48452 171 367 4.17E-42 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Gene3D G3DSA:1.25.40.10 500 693 5.9E-31 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Gene3D G3DSA:1.25.40.10 331 499 3.2E-57 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Pfam PF12770 CHAT domain 835 1155 1.5E-60 T 15-10-2018 IPR024983 CHAT domain THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 Gene3D G3DSA:1.25.40.10 239 330 2.5E-27 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SUPERFAMILY SSF48452 337 459 1.69E-19 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 67 100 3.9E-5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 107 140 0.085 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 347 380 3.4E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 187 220 1.9E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 387 420 8.7E-5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 507 540 0.0061 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 267 300 1.4E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 147 180 0.39 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 467 500 35.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 547 580 1.3 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 586 619 1.4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 227 260 5.9E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 307 340 0.032 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0964 ea567bf18b15c455b561a5592a869b4e 1164 SMART SM00028 427 460 8.8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2607 4bd2f4b1c1570d6641fe2d293afcd192 396 SUPERFAMILY SSF55811 204 341 2.71E-10 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 THII_2607 4bd2f4b1c1570d6641fe2d293afcd192 396 Pfam PF15891 Nucleoside 2-deoxyribosyltransferase like 17 121 5.5E-12 T 15-10-2018 IPR039470 Nucleoside 2-deoxyribosyltransferase-like THII_2607 4bd2f4b1c1570d6641fe2d293afcd192 396 Gene3D G3DSA:3.90.79.10 219 391 1.9E-15 T 15-10-2018 THII_2607 4bd2f4b1c1570d6641fe2d293afcd192 396 Gene3D G3DSA:3.40.50.450 2 146 7.0E-12 T 15-10-2018 THII_1095 3df3395405c53d0c600771c03809f45f 358 Pfam PF04754 Putative transposase, YhgA-like 3 202 1.0E-32 T 15-10-2018 IPR006842 Transposase (putative), YhgA-like THII_1095 3df3395405c53d0c600771c03809f45f 358 PRINTS PR01003 Flagellar assembly protein FliH signature 267 289 9.9E-6 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 THII_1095 3df3395405c53d0c600771c03809f45f 358 PRINTS PR01003 Flagellar assembly protein FliH signature 290 308 9.9E-6 T 15-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 THII_0039 71bf95679a3dd15c59f6eae11e899d31 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 189 2.3E-9 T 15-10-2018 THII_0039 71bf95679a3dd15c59f6eae11e899d31 218 SUPERFAMILY SSF56784 6 215 1.47E-37 T 15-10-2018 IPR036412 HAD-like superfamily THII_0039 71bf95679a3dd15c59f6eae11e899d31 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 72 188 3.5E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_0039 71bf95679a3dd15c59f6eae11e899d31 218 Gene3D G3DSA:3.40.50.1000 9 201 2.3E-22 T 15-10-2018 IPR023214 HAD superfamily THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 SUPERFAMILY SSF52172 690 818 2.13E-33 T 15-10-2018 IPR011006 CheY-like superfamily THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 Gene3D G3DSA:1.10.287.130 383 480 5.5E-28 T 15-10-2018 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 Gene3D G3DSA:3.30.565.10 481 646 7.2E-53 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 SUPERFAMILY SSF55874 471 642 7.86E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 SUPERFAMILY SSF47384 400 483 4.9E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 529 643 3.3E-31 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 Gene3D G3DSA:1.20.1480.50 289 382 1.9E-8 T 15-10-2018 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 SMART SM00388 417 482 5.2E-26 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 Gene3D G3DSA:3.40.50.2300 673 812 5.6E-38 T 15-10-2018 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 SUPERFAMILY SSF158472 326 374 2.75E-7 T 15-10-2018 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 SMART SM00387 529 645 5.0E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 SMART SM00304 325 377 2.6E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 Gene3D G3DSA:3.40.50.2300 823 948 2.9E-41 T 15-10-2018 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 642 3.0E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 623 3.0E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 3.0E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 598 3.0E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 SUPERFAMILY SSF52172 829 947 1.85E-37 T 15-10-2018 IPR011006 CheY-like superfamily THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 Pfam PF00672 HAMP domain 327 373 1.4E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 Pfam PF00072 Response regulator receiver domain 692 806 5.9E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 Pfam PF00072 Response regulator receiver domain 830 943 9.9E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 Pfam PF00512 His Kinase A (phospho-acceptor) domain 417 482 4.7E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 SMART SM00448 827 943 3.0E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0921 5e80ae262ea5c145eb6d2a41d342a49b 950 SMART SM00448 690 806 5.1E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2683 78d4361c79027acf245f893ec74e7fb4 69 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 31 63 4.1E-7 T 15-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 THII_0993 a09c78c24a9944f4d740856d0ff6496b 89 SMART SM01321 3 84 0.0015 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_0993 a09c78c24a9944f4d740856d0ff6496b 89 SUPERFAMILY SSF143422 6 89 1.26E-16 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_0993 a09c78c24a9944f4d740856d0ff6496b 89 Gene3D G3DSA:3.30.70.1290 4 89 4.6E-18 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_3698 f8cf439a96fe55d3097e52d9d17b858d 237 Gene3D G3DSA:3.40.630.30 4 183 5.9E-28 T 15-10-2018 THII_3698 f8cf439a96fe55d3097e52d9d17b858d 237 SUPERFAMILY SSF55729 6 176 1.93E-27 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_3698 f8cf439a96fe55d3097e52d9d17b858d 237 Pfam PF13302 Acetyltransferase (GNAT) domain 10 151 1.2E-14 T 15-10-2018 IPR000182 GNAT domain THII_2513 f0e64851dd30fcc1c89fec351c503030 156 SUPERFAMILY SSF88723 7 145 2.44E-9 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2513 f0e64851dd30fcc1c89fec351c503030 156 Pfam PF01850 PIN domain 7 144 9.7E-7 T 15-10-2018 IPR002716 PIN domain THII_2513 f0e64851dd30fcc1c89fec351c503030 156 Gene3D G3DSA:3.40.50.1010 7 150 3.9E-9 T 15-10-2018 THII_0047 d941420ca85f434cfa24e01995f04a70 241 Gene3D G3DSA:3.40.50.720 2 241 2.4E-71 T 15-10-2018 THII_0047 d941420ca85f434cfa24e01995f04a70 241 SUPERFAMILY SSF69572 6 240 1.83E-52 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 THII_0047 d941420ca85f434cfa24e01995f04a70 241 Pfam PF00899 ThiF family 11 237 1.4E-38 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 THII_1980 0b017857ba4b597736debd0f0688746c 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 202 212 5.5E-28 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial THII_1980 0b017857ba4b597736debd0f0688746c 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 145 162 5.5E-28 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial THII_1980 0b017857ba4b597736debd0f0688746c 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 213 224 5.5E-28 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial THII_1980 0b017857ba4b597736debd0f0688746c 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 225 240 5.5E-28 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial THII_1980 0b017857ba4b597736debd0f0688746c 290 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 20 126 1.4E-33 T 15-10-2018 IPR010627 Peptidase A24A, N-terminal THII_1980 0b017857ba4b597736debd0f0688746c 290 Pfam PF01478 Type IV leader peptidase family 137 245 1.3E-28 T 15-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 THII_1661 687540c1430630b978057f3c08b0eb32 643 Pfam PF09822 ABC-type uncharacterized transport system 33 305 4.1E-74 T 15-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 THII_1038 825719361639b98374fd2a25b5515469 171 PIRSF PIRSF001338 1 164 8.9E-71 T 15-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 THII_1038 825719361639b98374fd2a25b5515469 171 SMART SM01001 4 153 3.0E-97 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 THII_1038 825719361639b98374fd2a25b5515469 171 Pfam PF00731 AIR carboxylase 6 150 1.4E-67 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 THII_1038 825719361639b98374fd2a25b5515469 171 Gene3D G3DSA:3.40.50.7700 1 171 7.7E-77 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 THII_1038 825719361639b98374fd2a25b5515469 171 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 157 33.269 T 15-10-2018 IPR033747 Class I PurE THII_1038 825719361639b98374fd2a25b5515469 171 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 158 1.1E-66 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 THII_1038 825719361639b98374fd2a25b5515469 171 SUPERFAMILY SSF52255 5 169 1.31E-66 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 THII_1382 b5691ca1d9f82d00479b89e08c8b3e33 321 Pfam PF02581 Thiamine monophosphate synthase 136 315 4.1E-40 T 15-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 THII_1382 b5691ca1d9f82d00479b89e08c8b3e33 321 SUPERFAMILY SSF55811 9 131 5.55E-33 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 THII_1382 b5691ca1d9f82d00479b89e08c8b3e33 321 Pfam PF14815 NUDIX domain 13 129 1.0E-17 T 15-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 THII_1382 b5691ca1d9f82d00479b89e08c8b3e33 321 TIGRFAM TIGR00586 mutt: mutator mutT protein 10 132 2.3E-34 T 15-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 THII_1382 b5691ca1d9f82d00479b89e08c8b3e33 321 Gene3D G3DSA:3.90.79.10 9 131 6.9E-35 T 15-10-2018 THII_1382 b5691ca1d9f82d00479b89e08c8b3e33 321 PRINTS PR00502 NUDIX hydrolase family signature 38 52 1.3E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 THII_1382 b5691ca1d9f82d00479b89e08c8b3e33 321 PRINTS PR00502 NUDIX hydrolase family signature 52 67 1.3E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 THII_1382 b5691ca1d9f82d00479b89e08c8b3e33 321 SUPERFAMILY SSF51391 120 318 8.76E-48 T 15-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 THII_1382 b5691ca1d9f82d00479b89e08c8b3e33 321 Gene3D G3DSA:3.20.20.70 132 321 5.2E-48 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_1382 b5691ca1d9f82d00479b89e08c8b3e33 321 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 THII_2656 6df62907c0b50df626a144581abf5a6e 406 SUPERFAMILY SSF111126 74 151 7.32E-7 T 15-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily THII_2736 e8cbd98e1a65e045ef886c06d9af4780 378 Pfam PF12698 ABC-2 family transporter protein 27 370 3.2E-47 T 15-10-2018 THII_3444 3ef52926d9f732a31f0f30afca1ef92f 406 Pfam PF02817 e3 binding domain 104 137 1.5E-5 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 THII_3444 3ef52926d9f732a31f0f30afca1ef92f 406 Gene3D G3DSA:3.30.559.10 174 406 9.4E-92 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 THII_3444 3ef52926d9f732a31f0f30afca1ef92f 406 Gene3D G3DSA:2.40.50.100 2 98 1.2E-20 T 15-10-2018 THII_3444 3ef52926d9f732a31f0f30afca1ef92f 406 SUPERFAMILY SSF51230 3 94 1.44E-22 T 15-10-2018 IPR011053 Single hybrid motif THII_3444 3ef52926d9f732a31f0f30afca1ef92f 406 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 176 404 1.2E-79 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 THII_3444 3ef52926d9f732a31f0f30afca1ef92f 406 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 THII_3444 3ef52926d9f732a31f0f30afca1ef92f 406 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 5 405 1.2E-156 T 15-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 THII_3444 3ef52926d9f732a31f0f30afca1ef92f 406 SUPERFAMILY SSF52777 176 405 2.67E-86 T 15-10-2018 THII_3444 3ef52926d9f732a31f0f30afca1ef92f 406 Pfam PF00364 Biotin-requiring enzyme 5 77 1.4E-17 T 15-10-2018 IPR000089 Biotin/lipoyl attachment THII_1818 c47076aba459eefec5d61480a3e456a1 96 SUPERFAMILY SSF54862 8 86 6.28E-18 T 15-10-2018 THII_1818 c47076aba459eefec5d61480a3e456a1 96 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 27 38 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_1818 c47076aba459eefec5d61480a3e456a1 96 Gene3D G3DSA:3.30.70.20 19 94 5.6E-15 T 15-10-2018 THII_1818 c47076aba459eefec5d61480a3e456a1 96 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 72 83 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_1818 c47076aba459eefec5d61480a3e456a1 96 TIGRFAM TIGR02936 fdxN_nitrog: ferredoxin III, nif-specific 6 91 5.8E-33 T 15-10-2018 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific THII_1818 c47076aba459eefec5d61480a3e456a1 96 Pfam PF12838 4Fe-4S dicluster domain 26 85 5.1E-11 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_1028 d992a6511b462387bfbcb668ceb4bcc2 349 SMART SM00854 28 269 5.6E-55 T 15-10-2018 IPR019079 Capsule synthesis protein, CapA THII_1028 d992a6511b462387bfbcb668ceb4bcc2 349 SUPERFAMILY SSF56300 28 270 1.9E-35 T 15-10-2018 THII_1028 d992a6511b462387bfbcb668ceb4bcc2 349 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 29 266 8.2E-48 T 15-10-2018 IPR019079 Capsule synthesis protein, CapA THII_1028 d992a6511b462387bfbcb668ceb4bcc2 349 Gene3D G3DSA:3.60.21.10 20 302 2.0E-5 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like THII_2646 5dcb4ecd8733bb81e27532700c82017d 601 Pfam PF00501 AMP-binding enzyme 18 470 1.6E-93 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 THII_2646 5dcb4ecd8733bb81e27532700c82017d 601 SUPERFAMILY SSF56801 10 599 8.9E-116 T 15-10-2018 THII_2646 5dcb4ecd8733bb81e27532700c82017d 601 Gene3D G3DSA:3.40.50.12780 315 466 7.1E-35 T 15-10-2018 THII_2646 5dcb4ecd8733bb81e27532700c82017d 601 Gene3D G3DSA:3.40.50.12780 6 306 5.5E-56 T 15-10-2018 THII_2646 5dcb4ecd8733bb81e27532700c82017d 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 15-10-2018 IPR020845 AMP-binding, conserved site THII_2604 908118b4b98f61b6553b40d1b9689911 286 SUPERFAMILY SSF161098 16 268 2.15E-52 T 15-10-2018 IPR035906 MetI-like superfamily THII_2604 908118b4b98f61b6553b40d1b9689911 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 275 1.9E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 THII_2604 908118b4b98f61b6553b40d1b9689911 286 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 17 275 1.5E-124 T 15-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 THII_2604 908118b4b98f61b6553b40d1b9689911 286 Gene3D G3DSA:1.10.3720.10 18 275 1.1E-59 T 15-10-2018 IPR035906 MetI-like superfamily THII_2604 908118b4b98f61b6553b40d1b9689911 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 274 6.0E-95 T 15-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 THII_2356 6bcb8ffdda23363c3d8ade7dd834cdca 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 18 428 6.9E-96 T 15-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 THII_2356 6bcb8ffdda23363c3d8ade7dd834cdca 436 Gene3D G3DSA:1.20.1600.10 20 427 2.4E-85 T 15-10-2018 THII_2356 6bcb8ffdda23363c3d8ade7dd834cdca 436 Pfam PF02321 Outer membrane efflux protein 237 418 2.7E-29 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 THII_2356 6bcb8ffdda23363c3d8ade7dd834cdca 436 Pfam PF02321 Outer membrane efflux protein 24 212 6.4E-23 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 THII_2356 6bcb8ffdda23363c3d8ade7dd834cdca 436 SUPERFAMILY SSF56954 3 421 1.26E-83 T 15-10-2018 THII_1481 c508e14dcaec334832a20eeb510ed6b5 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 8.1E-14 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 THII_1481 c508e14dcaec334832a20eeb510ed6b5 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.8E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 THII_1481 c508e14dcaec334832a20eeb510ed6b5 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.8E-9 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 THII_1481 c508e14dcaec334832a20eeb510ed6b5 204 SUPERFAMILY SSF48498 82 198 5.12E-9 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily THII_1481 c508e14dcaec334832a20eeb510ed6b5 204 SUPERFAMILY SSF46689 10 88 6.98E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_1481 c508e14dcaec334832a20eeb510ed6b5 204 Gene3D G3DSA:1.10.357.10 7 201 1.8E-37 T 15-10-2018 THII_1879 d5ec135c2300c103f72b65444d054963 346 Pfam PF04352 ProQ/FINO family 121 223 2.9E-18 T 15-10-2018 IPR016103 ProQ/FinO domain THII_1879 d5ec135c2300c103f72b65444d054963 346 SUPERFAMILY SSF48657 114 212 1.57E-20 T 15-10-2018 IPR036442 ProQ/FinO domain superfamily THII_1879 d5ec135c2300c103f72b65444d054963 346 SMART SM00945 115 228 9.5E-8 T 15-10-2018 IPR016103 ProQ/FinO domain THII_1879 d5ec135c2300c103f72b65444d054963 346 Gene3D G3DSA:1.10.1710.10 87 230 1.3E-14 T 15-10-2018 IPR036442 ProQ/FinO domain superfamily THII_1307 246c6814f6546154e40376bcc7f5fd72 144 SUPERFAMILY SSF102400 1 133 2.35E-35 T 15-10-2018 IPR036768 DNA polymerase III subunit chi superfamily THII_1307 246c6814f6546154e40376bcc7f5fd72 144 Gene3D G3DSA:3.40.50.10110 1 138 3.5E-42 T 15-10-2018 IPR036768 DNA polymerase III subunit chi superfamily THII_1307 246c6814f6546154e40376bcc7f5fd72 144 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 132 4.5E-35 T 15-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 THII_3603 a8575b4907751d88ba5bfb8278e06a42 343 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 27 235 2.4E-67 T 15-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein THII_3603 a8575b4907751d88ba5bfb8278e06a42 343 SUPERFAMILY SSF69349 173 335 4.47E-37 T 15-10-2018 THII_3603 a8575b4907751d88ba5bfb8278e06a42 343 Gene3D G3DSA:2.40.50.230 86 188 5.7E-43 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily THII_3603 a8575b4907751d88ba5bfb8278e06a42 343 SUPERFAMILY SSF69255 95 182 7.85E-32 T 15-10-2018 THII_3603 a8575b4907751d88ba5bfb8278e06a42 343 SUPERFAMILY SSF69279 21 95 6.29E-12 T 15-10-2018 THII_3603 a8575b4907751d88ba5bfb8278e06a42 343 Gene3D G3DSA:2.30.110.50 29 70 7.4E-8 T 15-10-2018 THII_3603 a8575b4907751d88ba5bfb8278e06a42 343 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 12 252 2.5E-102 T 15-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset THII_0801 f73ce37530e27a649c028c028ce18c94 161 SUPERFAMILY SSF88723 10 154 1.77E-16 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_0801 f73ce37530e27a649c028c028ce18c94 161 Pfam PF01850 PIN domain 10 145 2.5E-13 T 15-10-2018 IPR002716 PIN domain THII_0801 f73ce37530e27a649c028c028ce18c94 161 Gene3D G3DSA:3.40.50.1010 10 144 3.7E-8 T 15-10-2018 THII_3957 5588769687fd0e7d2e7d2d8e701b8f9b 92 SUPERFAMILY SSF53098 6 82 6.83E-6 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_3957 5588769687fd0e7d2e7d2d8e701b8f9b 92 Pfam PF13358 DDE superfamily endonuclease 5 83 3.8E-21 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_3957 5588769687fd0e7d2e7d2d8e701b8f9b 92 Gene3D G3DSA:3.30.420.470 2 90 3.2E-11 T 15-10-2018 THII_1654 064a1f42d27f5e2625797cae8091ba3e 373 Pfam PF04230 Polysaccharide pyruvyl transferase 13 312 1.7E-35 T 15-10-2018 IPR007345 Polysaccharide pyruvyl transferase THII_1485 331305229647cbcf47de066b04581224 970 Gene3D G3DSA:3.40.50.300 37 258 6.8E-35 T 15-10-2018 THII_1485 331305229647cbcf47de066b04581224 970 SMART SM00487 47 277 2.4E-18 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain THII_1485 331305229647cbcf47de066b04581224 970 SMART SM00490 417 505 1.8E-6 T 15-10-2018 IPR001650 Helicase, C-terminal THII_1485 331305229647cbcf47de066b04581224 970 Pfam PF00270 DEAD/DEAH box helicase 53 210 6.4E-19 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 THII_1485 331305229647cbcf47de066b04581224 970 Gene3D G3DSA:3.40.50.300 342 527 3.7E-22 T 15-10-2018 THII_1485 331305229647cbcf47de066b04581224 970 SUPERFAMILY SSF52540 60 518 3.67E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3862 393d8578e87a3a133ed69b39066347c4 584 SUPERFAMILY SSF55729 267 351 8.2E-7 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_3862 393d8578e87a3a133ed69b39066347c4 584 SUPERFAMILY SSF53335 47 261 2.46E-24 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3862 393d8578e87a3a133ed69b39066347c4 584 Gene3D G3DSA:3.40.630.30 264 352 8.4E-8 T 15-10-2018 THII_3862 393d8578e87a3a133ed69b39066347c4 584 Pfam PF13489 Methyltransferase domain 55 169 7.3E-9 T 15-10-2018 THII_3862 393d8578e87a3a133ed69b39066347c4 584 Gene3D G3DSA:3.40.50.150 18 263 4.8E-23 T 15-10-2018 THII_3862 393d8578e87a3a133ed69b39066347c4 584 Pfam PF13527 Acetyltransferase (GNAT) domain 271 351 2.5E-7 T 15-10-2018 THII_3841 b487ff8fdfdb394ce1d6231052eb2dc4 81 Gene3D G3DSA:3.30.2020.20 7 71 6.8E-12 T 15-10-2018 THII_3841 b487ff8fdfdb394ce1d6231052eb2dc4 81 Pfam PF10387 Protein of unknown function (DUF2442) 8 73 7.2E-16 T 15-10-2018 IPR018841 Protein of unknown function DUF2442 THII_3574 c4731e281d423ec2166dbfa82f85baea 322 Pfam PF01544 CorA-like Mg2+ transporter protein 24 317 6.9E-43 T 15-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 THII_3574 c4731e281d423ec2166dbfa82f85baea 322 Gene3D G3DSA:1.20.58.340 134 241 2.7E-7 T 15-10-2018 THII_3574 c4731e281d423ec2166dbfa82f85baea 322 Gene3D G3DSA:3.30.460.20 9 133 1.4E-14 T 15-10-2018 THII_3574 c4731e281d423ec2166dbfa82f85baea 322 SUPERFAMILY SSF143865 22 252 4.18E-27 T 15-10-2018 THII_3574 c4731e281d423ec2166dbfa82f85baea 322 Gene3D G3DSA:1.20.58.340 246 322 2.1E-22 T 15-10-2018 THII_3574 c4731e281d423ec2166dbfa82f85baea 322 SUPERFAMILY SSF144083 257 320 5.62E-17 T 15-10-2018 THII_3428 3646d90f582ed6a39b90ef3339371e4f 694 SUPERFAMILY SSF50249 40 139 6.61E-17 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_3428 3646d90f582ed6a39b90ef3339371e4f 694 Pfam PF10150 Ribonuclease E/G family 135 404 2.9E-96 T 15-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 THII_3428 3646d90f582ed6a39b90ef3339371e4f 694 SMART SM00316 37 133 3.3E-7 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_3428 3646d90f582ed6a39b90ef3339371e4f 694 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 438 1.7E-166 T 15-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 THII_3428 3646d90f582ed6a39b90ef3339371e4f 694 Gene3D G3DSA:2.40.50.140 35 133 1.1E-30 T 15-10-2018 THII_3428 3646d90f582ed6a39b90ef3339371e4f 694 Hamap MF_00970 Ribonuclease E [rne]. 1 693 28.608 T 15-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 THII_3428 3646d90f582ed6a39b90ef3339371e4f 694 Gene3D G3DSA:3.40.1260.20 414 520 1.2E-37 T 15-10-2018 THII_3428 3646d90f582ed6a39b90ef3339371e4f 694 Pfam PF00575 S1 RNA binding domain 37 132 6.3E-11 T 15-10-2018 IPR003029 S1 domain GO:0003676 THII_2922 1d82281161b57eacd51077dac5ea3784 425 SUPERFAMILY SSF110849 6 120 9.59E-16 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily THII_2922 1d82281161b57eacd51077dac5ea3784 425 SMART SM00470 8 96 2.3E-8 T 15-10-2018 IPR003115 ParB/Sulfiredoxin THII_2922 1d82281161b57eacd51077dac5ea3784 425 Gene3D G3DSA:3.40.50.150 281 413 4.4E-7 T 15-10-2018 THII_2922 1d82281161b57eacd51077dac5ea3784 425 Pfam PF02195 ParB-like nuclease domain 27 83 7.9E-8 T 15-10-2018 IPR003115 ParB/Sulfiredoxin THII_2922 1d82281161b57eacd51077dac5ea3784 425 Gene3D G3DSA:3.90.1530.30 28 81 1.4E-8 T 15-10-2018 THII_2922 1d82281161b57eacd51077dac5ea3784 425 SUPERFAMILY SSF53335 214 368 3.6E-6 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2922 1d82281161b57eacd51077dac5ea3784 425 Gene3D G3DSA:3.40.50.150 107 280 4.5E-6 T 15-10-2018 THII_1707 3bc1ebb9828d795a9d7a0c8b4f2de114 268 Pfam PF00535 Glycosyl transferase family 2 4 128 3.1E-27 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_1707 3bc1ebb9828d795a9d7a0c8b4f2de114 268 SUPERFAMILY SSF53448 2 211 3.52E-53 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1707 3bc1ebb9828d795a9d7a0c8b4f2de114 268 Gene3D G3DSA:3.90.550.10 1 236 1.2E-56 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 SUPERFAMILY SSF47384 140 220 9.02E-17 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 SMART SM00448 7 120 2.5E-42 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 268 371 2.1E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 1.4E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 328 1.4E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 314 1.4E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 351 1.4E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 SMART SM00387 263 373 3.5E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 Pfam PF00512 His Kinase A (phospho-acceptor) domain 154 218 8.5E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 Pfam PF00072 Response regulator receiver domain 9 121 3.6E-29 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 Gene3D G3DSA:3.40.50.2300 1 122 9.9E-37 T 15-10-2018 THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 Gene3D G3DSA:3.30.565.10 217 371 3.4E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 SUPERFAMILY SSF55874 221 371 3.54E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 SMART SM00388 153 221 9.8E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 SUPERFAMILY SSF52172 4 142 1.27E-42 T 15-10-2018 IPR011006 CheY-like superfamily THII_1037 7de7465d80fbaccf3c60ad74c98eac85 373 Gene3D G3DSA:1.10.287.130 123 216 1.4E-17 T 15-10-2018 THII_1755 d2f6402e3914117ac81c0b1cd2c9d964 250 Gene3D G3DSA:3.40.50.720 1 250 4.9E-93 T 15-10-2018 THII_1755 d2f6402e3914117ac81c0b1cd2c9d964 250 SUPERFAMILY SSF69572 2 245 1.15E-87 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 THII_1755 d2f6402e3914117ac81c0b1cd2c9d964 250 Pfam PF00899 ThiF family 9 242 1.9E-62 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 Pfam PF04052 TolB amino-terminal domain 23 127 8.5E-26 T 15-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 SUPERFAMILY SSF52964 35 160 2.22E-34 T 15-10-2018 THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 SUPERFAMILY SSF69304 156 430 6.67E-56 T 15-10-2018 THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 7 428 43.955 T 15-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 Gene3D G3DSA:3.40.50.10070 19 163 4.2E-40 T 15-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 Gene3D G3DSA:2.120.10.30 164 432 1.4E-88 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 Pfam PF07676 WD40-like Beta Propeller Repeat 375 397 0.061 T 15-10-2018 IPR011659 WD40-like Beta Propeller THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 Pfam PF07676 WD40-like Beta Propeller Repeat 247 276 5.8E-7 T 15-10-2018 IPR011659 WD40-like Beta Propeller THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 Pfam PF07676 WD40-like Beta Propeller Repeat 194 232 1.1E-7 T 15-10-2018 IPR011659 WD40-like Beta Propeller THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 Pfam PF07676 WD40-like Beta Propeller Repeat 330 352 0.14 T 15-10-2018 IPR011659 WD40-like Beta Propeller THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 Pfam PF07676 WD40-like Beta Propeller Repeat 284 321 4.9E-9 T 15-10-2018 IPR011659 WD40-like Beta Propeller THII_1525 86d1db164394e67cc121fc0cf790ffc6 433 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 429 1.5E-143 T 15-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 THII_0439 7f49423dbf7f3127bf8d0304401b6389 250 Gene3D G3DSA:1.10.10.2560 134 233 1.5E-81 T 15-10-2018 THII_0439 7f49423dbf7f3127bf8d0304401b6389 250 Pfam PF08241 Methyltransferase domain 41 127 1.6E-12 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 THII_0439 7f49423dbf7f3127bf8d0304401b6389 250 SUPERFAMILY SSF53335 2 197 3.97E-24 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0439 7f49423dbf7f3127bf8d0304401b6389 250 Gene3D G3DSA:3.40.50.150 18 243 1.5E-81 T 15-10-2018 THII_1144 d491c8673ee66cca2953b8534bdc760e 376 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 241 314 1.4E-14 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal THII_1144 d491c8673ee66cca2953b8534bdc760e 376 Pfam PF12323 Helix-turn-helix domain 4 43 7.0E-15 T 15-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain THII_1144 d491c8673ee66cca2953b8534bdc760e 376 SUPERFAMILY SSF57783 313 350 9.64E-5 T 15-10-2018 THII_1144 d491c8673ee66cca2953b8534bdc760e 376 Pfam PF01385 Probable transposase 164 273 4.0E-24 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 THII_1144 d491c8673ee66cca2953b8534bdc760e 376 Pfam PF07282 Putative transposase DNA-binding domain 287 356 4.0E-25 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal THII_3029 ca0df486d65bbcc82b8966489459dee0 82 Pfam PF10387 Protein of unknown function (DUF2442) 6 77 3.8E-17 T 15-10-2018 IPR018841 Protein of unknown function DUF2442 THII_3029 ca0df486d65bbcc82b8966489459dee0 82 SUPERFAMILY SSF143880 1 78 4.45E-20 T 15-10-2018 IPR036782 NE0471-like, N-terminal THII_3029 ca0df486d65bbcc82b8966489459dee0 82 Gene3D G3DSA:3.30.2020.10 1 79 4.5E-10 T 15-10-2018 IPR036782 NE0471-like, N-terminal THII_1092 153bd972d9c814bd2c91db898712b2b9 288 Pfam PF12784 PD-(D/E)XK nuclease family transposase 6 233 1.9E-70 T 15-10-2018 THII_1092 153bd972d9c814bd2c91db898712b2b9 288 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 7 286 4.7E-55 T 15-10-2018 IPR010106 Recombination-promoting nuclease RpnA THII_3839 017275ca24833a08cb4ec89818febff1 294 Pfam PF12784 PD-(D/E)XK nuclease family transposase 7 233 6.0E-66 T 15-10-2018 THII_3839 017275ca24833a08cb4ec89818febff1 294 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 294 4.3E-35 T 15-10-2018 IPR010106 Recombination-promoting nuclease RpnA THII_0117 9703ee7f3df0e047072cfa21f8c26c1b 82 SUPERFAMILY SSF143011 5 79 7.98E-16 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_0117 9703ee7f3df0e047072cfa21f8c26c1b 82 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 7 80 7.9E-14 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_0117 9703ee7f3df0e047072cfa21f8c26c1b 82 Gene3D G3DSA:3.30.2310.20 4 80 1.6E-19 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_3665 c7f9c0d6b2cf8c5e5973bbba9f5a2780 389 Pfam PF01464 Transglycosylase SLT domain 265 362 2.8E-27 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 THII_3665 c7f9c0d6b2cf8c5e5973bbba9f5a2780 389 Gene3D G3DSA:1.10.530.10 259 389 2.8E-43 T 15-10-2018 THII_3665 c7f9c0d6b2cf8c5e5973bbba9f5a2780 389 SUPERFAMILY SSF53955 257 387 1.96E-44 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_3665 c7f9c0d6b2cf8c5e5973bbba9f5a2780 389 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 283 311 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 THII_2507 842fa2a5c424d1b475b3d09ab08567ce 346 SUPERFAMILY SSF51735 1 319 2.88E-65 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2507 842fa2a5c424d1b475b3d09ab08567ce 346 Gene3D G3DSA:3.40.50.720 2 324 1.4E-57 T 15-10-2018 THII_2507 842fa2a5c424d1b475b3d09ab08567ce 346 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 4.6E-36 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 THII_2023 b80493db7a8121b997ad793d88a8f154 695 SUPERFAMILY SSF52540 444 673 2.25E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2023 b80493db7a8121b997ad793d88a8f154 695 Gene3D G3DSA:3.40.50.300 408 623 8.3E-48 T 15-10-2018 THII_2023 b80493db7a8121b997ad793d88a8f154 695 SMART SM00382 476 608 3.1E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2023 b80493db7a8121b997ad793d88a8f154 695 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 480 604 3.6E-31 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_2023 b80493db7a8121b997ad793d88a8f154 695 SUPERFAMILY SSF52540 220 417 3.23E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1267 78a3b07d3cff7e3d03f297059a0abcd5 216 Pfam PF13614 AAA domain 4 76 1.5E-13 T 15-10-2018 IPR025669 AAA domain THII_1267 78a3b07d3cff7e3d03f297059a0abcd5 216 Gene3D G3DSA:3.40.50.300 1 204 4.7E-39 T 15-10-2018 THII_1267 78a3b07d3cff7e3d03f297059a0abcd5 216 SUPERFAMILY SSF52540 1 205 7.38E-33 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1267 78a3b07d3cff7e3d03f297059a0abcd5 216 PIRSF PIRSF009320 1 216 4.5E-32 T 15-10-2018 THII_2588 deb2be5a93d0fb3c36791601bce977a2 103 SUPERFAMILY SSF47413 10 90 1.38E-22 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_2588 deb2be5a93d0fb3c36791601bce977a2 103 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 84 8.7E-29 T 15-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 THII_2588 deb2be5a93d0fb3c36791601bce977a2 103 Gene3D G3DSA:1.10.260.40 2 102 3.7E-31 T 15-10-2018 THII_3398 6d8fe2593d364e034376d72e0ca811f8 152 Pfam PF12019 Type II transport protein GspH 29 141 1.7E-12 T 15-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 THII_3398 6d8fe2593d364e034376d72e0ca811f8 152 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 1 145 7.1E-18 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 THII_3398 6d8fe2593d364e034376d72e0ca811f8 152 Gene3D G3DSA:3.55.40.10 22 151 1.6E-33 T 15-10-2018 THII_3398 6d8fe2593d364e034376d72e0ca811f8 152 SUPERFAMILY SSF54523 1 107 3.45E-8 T 15-10-2018 THII_3398 6d8fe2593d364e034376d72e0ca811f8 152 PRINTS PR00885 Bacterial general secretion pathway protein H signature 108 123 3.3E-6 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 THII_3398 6d8fe2593d364e034376d72e0ca811f8 152 PRINTS PR00885 Bacterial general secretion pathway protein H signature 5 19 3.3E-6 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 THII_0427 d7d547b0f72b8de61963e3826efb9c51 146 Gene3D G3DSA:1.20.1220.20 1 146 7.4E-31 T 15-10-2018 THII_0427 d7d547b0f72b8de61963e3826efb9c51 146 Pfam PF01724 Domain of unknown function DUF29 6 143 2.0E-50 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0063 d6089985e3fdabe6d85e6a5b851cebee 166 SUPERFAMILY SSF158682 13 135 2.09E-15 T 15-10-2018 IPR029024 TerB-like THII_0063 d6089985e3fdabe6d85e6a5b851cebee 166 Gene3D G3DSA:1.10.3680.10 5 147 1.5E-13 T 15-10-2018 IPR029024 TerB-like THII_0063 d6089985e3fdabe6d85e6a5b851cebee 166 Pfam PF05099 Tellurite resistance protein TerB 8 132 1.2E-6 T 15-10-2018 IPR007791 Co-chaperone DjlA, N-terminal THII_2869 25e0b4ef41153cc6787e7bfa715aed55 200 SUPERFAMILY SSF88946 2 104 7.06E-16 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 THII_2869 25e0b4ef41153cc6787e7bfa715aed55 200 Pfam PF04542 Sigma-70 region 2 25 92 2.9E-9 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 THII_2869 25e0b4ef41153cc6787e7bfa715aed55 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 193 6.2E-17 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 THII_2869 25e0b4ef41153cc6787e7bfa715aed55 200 Gene3D G3DSA:1.10.1740.10 1 123 2.6E-21 T 15-10-2018 THII_1204 8496eaab8ec68d9d0e60a1a852d5701e 223 SUPERFAMILY SSF161098 7 216 1.13E-44 T 15-10-2018 IPR035906 MetI-like superfamily THII_1204 8496eaab8ec68d9d0e60a1a852d5701e 223 Gene3D G3DSA:1.10.3720.10 2 222 6.0E-53 T 15-10-2018 IPR035906 MetI-like superfamily THII_1204 8496eaab8ec68d9d0e60a1a852d5701e 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 218 5.5E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 THII_1204 8496eaab8ec68d9d0e60a1a852d5701e 223 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 221 4.7E-70 T 15-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 THII_3147 eeda813dcb72910e835b71c6aa6aa5b7 92 Gene3D G3DSA:3.30.2310.20 1 92 1.6E-24 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_3147 eeda813dcb72910e835b71c6aa6aa5b7 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 92 1.2E-21 T 15-10-2018 IPR007711 Toxin HigB-1 THII_3147 eeda813dcb72910e835b71c6aa6aa5b7 92 SUPERFAMILY SSF143011 1 92 1.57E-16 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1115 9b642c8eee16631e426ee28c4f58f066 259 Gene3D G3DSA:3.40.50.150 38 227 2.4E-36 T 15-10-2018 THII_1115 9b642c8eee16631e426ee28c4f58f066 259 Pfam PF05050 Methyltransferase FkbM domain 62 219 2.2E-20 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_1115 9b642c8eee16631e426ee28c4f58f066 259 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 60 196 3.5E-29 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_1115 9b642c8eee16631e426ee28c4f58f066 259 SUPERFAMILY SSF53335 24 226 8.44E-48 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2213 aec09fd7c0ebdcb59c5ecf6b09dfd255 103 Pfam PF03400 IS1 transposase 4 86 1.3E-8 T 15-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 THII_2779 e48690f6fef2dd1c5abadac1901e60a7 528 Pfam PF02321 Outer membrane efflux protein 312 499 9.3E-14 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 THII_2779 e48690f6fef2dd1c5abadac1901e60a7 528 Pfam PF02321 Outer membrane efflux protein 42 240 1.8E-6 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 THII_2779 e48690f6fef2dd1c5abadac1901e60a7 528 Gene3D G3DSA:1.20.1600.10 246 516 1.0E-25 T 15-10-2018 THII_2779 e48690f6fef2dd1c5abadac1901e60a7 528 SUPERFAMILY SSF56954 11 507 1.44E-36 T 15-10-2018 THII_1821 23f95a89eb0344f9cfbb649e8f7ffd6c 263 Pfam PF05685 Putative restriction endonuclease 43 161 3.3E-14 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1821 23f95a89eb0344f9cfbb649e8f7ffd6c 263 SUPERFAMILY SSF52980 48 182 3.06E-7 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0864 81a8c14c38f6ac267eddf7092ef3842f 116 Pfam PF01022 Bacterial regulatory protein, arsR family 12 58 3.4E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 THII_0864 81a8c14c38f6ac267eddf7092ef3842f 116 Gene3D G3DSA:1.10.10.10 1 95 5.7E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0864 81a8c14c38f6ac267eddf7092ef3842f 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 3.6E-20 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 THII_0864 81a8c14c38f6ac267eddf7092ef3842f 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 3.6E-20 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 THII_0864 81a8c14c38f6ac267eddf7092ef3842f 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 3.6E-20 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 THII_0864 81a8c14c38f6ac267eddf7092ef3842f 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 3.6E-20 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 THII_0864 81a8c14c38f6ac267eddf7092ef3842f 116 SUPERFAMILY SSF46785 4 84 6.95E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_0864 81a8c14c38f6ac267eddf7092ef3842f 116 SMART SM00418 5 83 4.4E-25 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 SUPERFAMILY SSF53223 11 162 1.51E-51 T 15-10-2018 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 PIRSF PIRSF036684 1 766 0.0 T 15-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 Pfam PF03949 Malic enzyme, NAD binding domain 166 360 6.9E-19 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 Gene3D G3DSA:3.40.50.720 162 454 4.0E-76 T 15-10-2018 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 Gene3D G3DSA:3.40.50.10380 1 161 6.4E-66 T 15-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 SMART SM01274 19 152 5.6E-75 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 Pfam PF00390 Malic enzyme, N-terminal domain 21 152 2.0E-25 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 SUPERFAMILY SSF51735 164 461 6.01E-83 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 Gene3D G3DSA:3.40.50.10950 455 758 3.5E-87 T 15-10-2018 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 SMART SM00919 164 409 1.4E-123 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 SUPERFAMILY SSF53659 438 761 9.05E-83 T 15-10-2018 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 Pfam PF01515 Phosphate acetyl/butaryl transferase 438 758 4.1E-89 T 15-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 THII_0463 8f11348eaba5a655df459ef8ec706e5a 781 Gene3D G3DSA:3.40.50.10750 581 734 3.5E-87 T 15-10-2018 THII_0649 f440d3cce2d976fc906ee87e772132e8 151 Pfam PF03652 Holliday junction resolvase 1 148 1.5E-34 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 THII_0649 f440d3cce2d976fc906ee87e772132e8 151 Gene3D G3DSA:3.30.420.140 1 150 2.2E-32 T 15-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 THII_0649 f440d3cce2d976fc906ee87e772132e8 151 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 151 18.167 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 THII_0649 f440d3cce2d976fc906ee87e772132e8 151 SMART SM00732 1 98 2.4E-28 T 15-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 THII_0649 f440d3cce2d976fc906ee87e772132e8 151 SUPERFAMILY SSF53098 1 148 2.12E-31 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_0649 f440d3cce2d976fc906ee87e772132e8 151 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 1 103 8.6E-26 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 THII_1735 0504d9b2451ea62838b56dfc9468b73f 257 SUPERFAMILY SSF51161 2 257 3.34E-74 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_1735 0504d9b2451ea62838b56dfc9468b73f 257 Gene3D G3DSA:1.20.1180.10 192 257 2.7E-23 T 15-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 THII_1735 0504d9b2451ea62838b56dfc9468b73f 257 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 257 42.349 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 THII_1735 0504d9b2451ea62838b56dfc9468b73f 257 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 104 137 1.9E-7 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1735 0504d9b2451ea62838b56dfc9468b73f 257 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 29 61 3.6E-5 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1735 0504d9b2451ea62838b56dfc9468b73f 257 PIRSF PIRSF000456 1 257 4.8E-101 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 THII_1735 0504d9b2451ea62838b56dfc9468b73f 257 Gene3D G3DSA:2.160.10.10 1 190 1.4E-51 T 15-10-2018 THII_1735 0504d9b2451ea62838b56dfc9468b73f 257 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 2 30 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 THII_1735 0504d9b2451ea62838b56dfc9468b73f 257 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 256 3.9E-99 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 THII_1735 0504d9b2451ea62838b56dfc9468b73f 257 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 175 256 6.9E-29 T 15-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 THII_1590 cc4b8255f515fd288927b65e2a44d877 238 Pfam PF02661 Fic/DOC family 97 190 6.2E-10 T 15-10-2018 IPR003812 Fido domain THII_1590 cc4b8255f515fd288927b65e2a44d877 238 Gene3D G3DSA:1.10.3290.10 27 237 4.8E-31 T 15-10-2018 IPR036597 Fido-like domain superfamily THII_1590 cc4b8255f515fd288927b65e2a44d877 238 SUPERFAMILY SSF140931 72 234 1.83E-17 T 15-10-2018 IPR036597 Fido-like domain superfamily THII_3622 4df1e64effcad7861dae0f24809ec631 747 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 488 667 9.0E-35 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_3622 4df1e64effcad7861dae0f24809ec631 747 Gene3D G3DSA:3.30.70.1230 479 684 1.8E-66 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3622 4df1e64effcad7861dae0f24809ec631 747 SMART SM01080 39 389 1.4E-72 T 15-10-2018 IPR007890 CHASE2 THII_3622 4df1e64effcad7861dae0f24809ec631 747 Pfam PF05226 CHASE2 domain 23 387 1.0E-56 T 15-10-2018 IPR007890 CHASE2 THII_3622 4df1e64effcad7861dae0f24809ec631 747 SUPERFAMILY SSF55073 485 670 5.34E-58 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3622 4df1e64effcad7861dae0f24809ec631 747 SMART SM00044 455 651 1.5E-14 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_2777 e4db2d418c912f84ecac3da1a2cba273 127 Gene3D G3DSA:3.20.20.70 1 122 5.2E-27 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2777 e4db2d418c912f84ecac3da1a2cba273 127 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 64 125 2.0E-4 T 15-10-2018 THII_2777 e4db2d418c912f84ecac3da1a2cba273 127 SUPERFAMILY SSF102114 14 84 8.24E-11 T 15-10-2018 THII_2777 e4db2d418c912f84ecac3da1a2cba273 127 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 15 101 1.3E-16 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain THII_2777 e4db2d418c912f84ecac3da1a2cba273 127 Pfam PF13186 Iron-sulfur cluster-binding domain 17 75 6.6E-8 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain THII_2084 9e04f392ee6c36c1c9e7b1dfed26ce78 452 Pfam PF02347 Glycine cleavage system P-protein 3 442 1.2E-116 T 15-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 THII_2084 9e04f392ee6c36c1c9e7b1dfed26ce78 452 SUPERFAMILY SSF53383 1 449 3.09E-101 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_2084 9e04f392ee6c36c1c9e7b1dfed26ce78 452 Gene3D G3DSA:3.40.640.10 79 351 6.8E-149 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_2084 9e04f392ee6c36c1c9e7b1dfed26ce78 452 PIRSF PIRSF006815 1 450 9.0E-163 T 15-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 THII_2084 9e04f392ee6c36c1c9e7b1dfed26ce78 452 Gene3D G3DSA:3.90.1150.10 68 446 6.8E-149 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_2084 9e04f392ee6c36c1c9e7b1dfed26ce78 452 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 449 45.562 T 15-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 THII_3755 79861667477098c9af7c39c18a7fb656 108 Pfam PF01710 Transposase 1 103 6.7E-15 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_3755 79861667477098c9af7c39c18a7fb656 108 SUPERFAMILY SSF46689 3 95 2.96E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 Gene3D G3DSA:3.40.50.1260 165 381 5.3E-155 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 PIRSF PIRSF000724 1 394 1.3E-135 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 Pfam PF00162 Phosphoglycerate kinase 6 381 1.7E-145 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.8E-84 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.8E-84 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.8E-84 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 PRINTS PR00477 Phosphoglycerate kinase family signature 367 384 2.8E-84 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.8E-84 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 PRINTS PR00477 Phosphoglycerate kinase family signature 311 336 2.8E-84 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.8E-84 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 PRINTS PR00477 Phosphoglycerate kinase family signature 344 355 2.8E-84 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.8E-84 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 SUPERFAMILY SSF53748 3 391 1.41E-147 T 15-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 391 39.628 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 Gene3D G3DSA:3.40.50.1260 8 389 5.3E-155 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3340 8a5f5106a3640ff7444c8ad006dc370c 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 15-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_2987 6051192d253d66ac6754f8806c42d33a 118 Pfam PF13847 Methyltransferase domain 40 112 4.7E-10 T 15-10-2018 IPR025714 Methyltransferase domain THII_2987 6051192d253d66ac6754f8806c42d33a 118 Gene3D G3DSA:3.40.50.150 13 116 1.3E-12 T 15-10-2018 THII_2987 6051192d253d66ac6754f8806c42d33a 118 SUPERFAMILY SSF53335 16 115 4.63E-17 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1648 5c16ce03c59ca283fa4ca441b90fada6 221 Gene3D G3DSA:3.40.50.150 1 165 2.2E-32 T 15-10-2018 THII_1648 5c16ce03c59ca283fa4ca441b90fada6 221 Pfam PF13489 Methyltransferase domain 7 153 3.2E-17 T 15-10-2018 THII_1648 5c16ce03c59ca283fa4ca441b90fada6 221 SUPERFAMILY SSF53335 4 161 1.13E-29 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1378 5016dda1f94e6ab9011b96aea2a7ba06 177 Pfam PF01252 Signal peptidase (SPase) II 31 172 2.0E-41 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 THII_1378 5016dda1f94e6ab9011b96aea2a7ba06 177 ProSitePatterns PS00855 Signal peptidases II signature. 119 131 - T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 THII_1378 5016dda1f94e6ab9011b96aea2a7ba06 177 TIGRFAM TIGR00077 lspA: signal peptidase II 23 174 4.9E-45 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 THII_1378 5016dda1f94e6ab9011b96aea2a7ba06 177 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 22 177 17.433 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 THII_1378 5016dda1f94e6ab9011b96aea2a7ba06 177 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 116 131 4.8E-19 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 THII_1378 5016dda1f94e6ab9011b96aea2a7ba06 177 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 152 168 4.8E-19 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 THII_1378 5016dda1f94e6ab9011b96aea2a7ba06 177 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 68 76 4.8E-19 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00369 194 217 53.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00369 218 242 12.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00369 98 121 80.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00369 170 193 130.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00369 266 289 130.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00369 290 314 9.7 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00369 122 146 11.0 T 15-10-2018 IPR003591 Leucine-rich repeat, typical subtype THII_3212 ef9f710e7a33541b8407dd55d747319e 494 Gene3D G3DSA:2.60.40.10 389 494 5.4E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3212 ef9f710e7a33541b8407dd55d747319e 494 Gene3D G3DSA:3.80.10.10 196 369 1.4E-51 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00365 242 271 44.0 T 15-10-2018 THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00365 290 316 180.0 T 15-10-2018 THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00365 146 172 35.0 T 15-10-2018 THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00365 194 220 140.0 T 15-10-2018 THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SMART SM00365 98 124 43.0 T 15-10-2018 THII_3212 ef9f710e7a33541b8407dd55d747319e 494 Pfam PF08263 Leucine rich repeat N-terminal domain 40 73 0.0015 T 15-10-2018 IPR013210 Leucine-rich repeat-containing N-terminal, plant-type THII_3212 ef9f710e7a33541b8407dd55d747319e 494 Gene3D G3DSA:3.80.10.10 35 190 4.0E-50 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3212 ef9f710e7a33541b8407dd55d747319e 494 SUPERFAMILY SSF52058 65 360 5.78E-67 T 15-10-2018 THII_3212 ef9f710e7a33541b8407dd55d747319e 494 Pfam PF00560 Leucine Rich Repeat 100 122 0.43 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_3212 ef9f710e7a33541b8407dd55d747319e 494 Pfam PF00560 Leucine Rich Repeat 292 314 1.2 T 15-10-2018 IPR001611 Leucine-rich repeat GO:0005515 THII_2527 853c7a8a4ce077f5eec69c247f9520b0 225 Pfam PF03006 Haemolysin-III related 20 217 4.3E-38 T 15-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 THII_2527 853c7a8a4ce077f5eec69c247f9520b0 225 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 24 223 1.7E-60 T 15-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 THII_3738 9521ee441fff83d5d392828023a4bb4d 303 SUPERFAMILY SSF54534 141 247 4.32E-22 T 15-10-2018 THII_3738 9521ee441fff83d5d392828023a4bb4d 303 Gene3D G3DSA:3.10.50.40 148 251 1.1E-32 T 15-10-2018 THII_3738 9521ee441fff83d5d392828023a4bb4d 303 TIGRFAM TIGR02933 nifM_nitrog: nitrogen fixation protein NifM 18 284 2.6E-60 T 15-10-2018 IPR014282 Nitrogen fixation protein NifM THII_3738 9521ee441fff83d5d392828023a4bb4d 303 Gene3D G3DSA:1.10.4030.30 38 252 1.1E-32 T 15-10-2018 THII_3738 9521ee441fff83d5d392828023a4bb4d 303 SUPERFAMILY SSF109998 17 173 1.65E-11 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily THII_3738 9521ee441fff83d5d392828023a4bb4d 303 Pfam PF00639 PPIC-type PPIASE domain 154 247 1.1E-20 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 PRINTS PR00313 NodO calcium binding signature 321 330 1.2E-11 T 15-10-2018 THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 PRINTS PR00313 NodO calcium binding signature 280 291 1.2E-11 T 15-10-2018 THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 PRINTS PR00313 NodO calcium binding signature 292 300 1.2E-11 T 15-10-2018 THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 PRINTS PR00313 NodO calcium binding signature 301 309 1.2E-11 T 15-10-2018 THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 270 288 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 317 327 0.26 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 265 280 1.2 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 300 312 0.16 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 238 254 0.15 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 282 298 0.0017 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 SUPERFAMILY SSF51120 234 334 7.46E-23 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 288 306 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 Gene3D G3DSA:2.150.10.10 233 287 1.5E-12 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 Gene3D G3DSA:2.150.10.10 288 346 5.1E-12 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal THII_1552 e801ceca5aedf120a550f5f9f051e75d 350 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 279 297 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site THII_3121 133e4c2288eb98b02f9694bfe4be42bb 385 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 377 9.5E-129 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_3121 133e4c2288eb98b02f9694bfe4be42bb 385 Gene3D G3DSA:3.90.1150.10 256 383 2.8E-38 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_3121 133e4c2288eb98b02f9694bfe4be42bb 385 Gene3D G3DSA:3.40.640.10 1 254 1.9E-95 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_3121 133e4c2288eb98b02f9694bfe4be42bb 385 SUPERFAMILY SSF53383 6 381 9.32E-116 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_3121 133e4c2288eb98b02f9694bfe4be42bb 385 PIRSF PIRSF000390 3 384 4.9E-114 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_3585 741366eb681cb7f4f744bbac7382b477 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 THII_3585 741366eb681cb7f4f744bbac7382b477 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 4.2E-94 T 15-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 THII_3585 741366eb681cb7f4f744bbac7382b477 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 185 5.7E-4 T 15-10-2018 THII_3585 741366eb681cb7f4f744bbac7382b477 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.5E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3585 741366eb681cb7f4f744bbac7382b477 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.5E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3585 741366eb681cb7f4f744bbac7382b477 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.5E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3585 741366eb681cb7f4f744bbac7382b477 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.5E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3585 741366eb681cb7f4f744bbac7382b477 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.5E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3585 741366eb681cb7f4f744bbac7382b477 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-42 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3585 741366eb681cb7f4f744bbac7382b477 247 Gene3D G3DSA:3.40.50.720 2 246 4.0E-78 T 15-10-2018 THII_3585 741366eb681cb7f4f744bbac7382b477 247 SUPERFAMILY SSF51735 7 246 9.38E-79 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3585 741366eb681cb7f4f744bbac7382b477 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.1E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3585 741366eb681cb7f4f744bbac7382b477 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 5.1E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3585 741366eb681cb7f4f744bbac7382b477 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.1E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3585 741366eb681cb7f4f744bbac7382b477 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 9.3E-61 T 15-10-2018 THII_1890 559d6ed78ba82fc374a9d24e0bc359c8 267 Pfam PF05685 Putative restriction endonuclease 31 174 5.4E-21 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1890 559d6ed78ba82fc374a9d24e0bc359c8 267 Gene3D G3DSA:3.90.1570.10 28 143 9.7E-6 T 15-10-2018 THII_1890 559d6ed78ba82fc374a9d24e0bc359c8 267 SUPERFAMILY SSF52980 30 162 2.25E-12 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3819 a8cb6d4169c034dd4598448da6d67317 337 Gene3D G3DSA:3.40.50.720 4 316 2.8E-97 T 15-10-2018 THII_3819 a8cb6d4169c034dd4598448da6d67317 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 5.4E-55 T 15-10-2018 IPR016040 NAD(P)-binding domain THII_3819 a8cb6d4169c034dd4598448da6d67317 337 Gene3D G3DSA:3.90.25.10 180 328 2.8E-97 T 15-10-2018 THII_3819 a8cb6d4169c034dd4598448da6d67317 337 SUPERFAMILY SSF51735 1 333 1.76E-87 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3819 a8cb6d4169c034dd4598448da6d67317 337 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.1E-28 T 15-10-2018 THII_3819 a8cb6d4169c034dd4598448da6d67317 337 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.1E-28 T 15-10-2018 THII_3819 a8cb6d4169c034dd4598448da6d67317 337 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.1E-28 T 15-10-2018 THII_3819 a8cb6d4169c034dd4598448da6d67317 337 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 1.1E-28 T 15-10-2018 THII_2189 4867af32919f57372595b880cfdae724 492 Gene3D G3DSA:2.40.50.180 43 120 1.3E-6 T 15-10-2018 THII_2189 4867af32919f57372595b880cfdae724 492 SUPERFAMILY SSF50341 23 117 4.58E-8 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_2189 4867af32919f57372595b880cfdae724 492 Pfam PF01584 CheW-like domain 28 117 1.0E-6 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_3543 736b6d3e1b694dd3e7670fc0050b100a 83 Pfam PF01455 HupF/HypC family 1 67 1.2E-24 T 15-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC THII_3543 736b6d3e1b694dd3e7670fc0050b100a 83 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 15-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site THII_3543 736b6d3e1b694dd3e7670fc0050b100a 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 5.8E-15 T 15-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC THII_3543 736b6d3e1b694dd3e7670fc0050b100a 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 5.8E-15 T 15-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC THII_3543 736b6d3e1b694dd3e7670fc0050b100a 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 40 56 5.8E-15 T 15-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC THII_3543 736b6d3e1b694dd3e7670fc0050b100a 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 58 70 5.8E-15 T 15-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC THII_3543 736b6d3e1b694dd3e7670fc0050b100a 83 SUPERFAMILY SSF159127 1 78 1.57E-24 T 15-10-2018 IPR037254 HupF/HypC superfamily THII_3543 736b6d3e1b694dd3e7670fc0050b100a 83 Gene3D G3DSA:2.40.50.970 1 80 1.3E-25 T 15-10-2018 IPR037254 HupF/HypC superfamily THII_3543 736b6d3e1b694dd3e7670fc0050b100a 83 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 76 5.3E-24 T 15-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC THII_1452 771e76dc2bb8b00305c6e3b2c7fd05bd 749 TIGRFAM TIGR03882 cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain 168 335 3.2E-47 T 15-10-2018 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain THII_1452 771e76dc2bb8b00305c6e3b2c7fd05bd 749 Gene3D G3DSA:2.40.50.820 406 495 9.3E-133 T 15-10-2018 THII_1452 771e76dc2bb8b00305c6e3b2c7fd05bd 749 SUPERFAMILY SSF69572 120 284 1.83E-6 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 THII_1452 771e76dc2bb8b00305c6e3b2c7fd05bd 749 Gene3D G3DSA:3.30.160.660 532 663 9.3E-133 T 15-10-2018 THII_1452 771e76dc2bb8b00305c6e3b2c7fd05bd 749 Gene3D G3DSA:1.10.490.140 384 721 9.3E-133 T 15-10-2018 THII_1452 771e76dc2bb8b00305c6e3b2c7fd05bd 749 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 374 712 1.4E-36 T 15-10-2018 IPR003776 YcaO-like domain THII_1452 771e76dc2bb8b00305c6e3b2c7fd05bd 749 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 376 712 8.4E-95 T 15-10-2018 IPR003776 YcaO-like domain THII_1452 771e76dc2bb8b00305c6e3b2c7fd05bd 749 Gene3D G3DSA:1.10.10.2500 2 95 6.6E-26 T 15-10-2018 THII_1452 771e76dc2bb8b00305c6e3b2c7fd05bd 749 Gene3D G3DSA:1.10.490.140 295 364 1.1E-8 T 15-10-2018 THII_1452 771e76dc2bb8b00305c6e3b2c7fd05bd 749 TIGRFAM TIGR03604 TOMM_cyclo_SagD: thiazole/oxazole-forming peptide maturase, SagD family component 377 746 8.9E-80 T 15-10-2018 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component THII_1452 771e76dc2bb8b00305c6e3b2c7fd05bd 749 Gene3D G3DSA:3.40.50.720 97 286 8.8E-55 T 15-10-2018 THII_2893 81ab419761a4761c688324d6d44ffc54 277 Pfam PF12679 ABC-2 family transporter protein 10 276 2.8E-16 T 15-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 THII_2689 2c96038a2363b8b8a38c246aa6ac68ef 425 Pfam PF00534 Glycosyl transferases group 1 226 403 3.8E-7 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_2689 2c96038a2363b8b8a38c246aa6ac68ef 425 Gene3D G3DSA:3.40.50.2000 220 408 2.7E-65 T 15-10-2018 THII_2689 2c96038a2363b8b8a38c246aa6ac68ef 425 Gene3D G3DSA:3.40.50.11720 41 213 1.5E-50 T 15-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 THII_2689 2c96038a2363b8b8a38c246aa6ac68ef 425 SUPERFAMILY SSF53756 62 424 3.45E-19 T 15-10-2018 THII_2689 2c96038a2363b8b8a38c246aa6ac68ef 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 38 214 8.8E-67 T 15-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 THII_3471 6cce46ebd97c276f661bc1c2582583fb 441 SUPERFAMILY SSF111283 19 439 4.32E-54 T 15-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 THII_3471 6cce46ebd97c276f661bc1c2582583fb 441 Pfam PF01523 Putative modulator of DNA gyrase 26 297 9.5E-12 T 15-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 THII_3095 cc2be2dbd1ad26a0a135b13106abcb74 438 Gene3D G3DSA:3.30.70.1070 325 431 1.5E-16 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 THII_3095 cc2be2dbd1ad26a0a135b13106abcb74 438 Gene3D G3DSA:3.40.50.300 30 190 1.5E-10 T 15-10-2018 THII_3095 cc2be2dbd1ad26a0a135b13106abcb74 438 SUPERFAMILY SSF52540 6 263 2.09E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3095 cc2be2dbd1ad26a0a135b13106abcb74 438 Pfam PF13401 AAA domain 42 169 9.0E-21 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3146 11f7903abb6b12a559d05cc6850f49e7 332 SMART SM00062 26 242 1.8E-4 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_3146 11f7903abb6b12a559d05cc6850f49e7 332 Gene3D G3DSA:3.40.190.10 27 314 2.9E-83 T 15-10-2018 THII_3146 11f7903abb6b12a559d05cc6850f49e7 332 SUPERFAMILY SSF53850 24 242 1.53E-40 T 15-10-2018 THII_3146 11f7903abb6b12a559d05cc6850f49e7 332 Pfam PF13379 NMT1-like family 24 253 2.7E-38 T 15-10-2018 THII_3146 11f7903abb6b12a559d05cc6850f49e7 332 Gene3D G3DSA:3.40.190.10 106 203 2.9E-83 T 15-10-2018 THII_1873 92a07744f9dfd34abe099aea5a40deb5 302 SUPERFAMILY SSF52518 6 294 1.23E-50 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_1873 92a07744f9dfd34abe099aea5a40deb5 302 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 83 246 8.5E-21 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 THII_1873 92a07744f9dfd34abe099aea5a40deb5 302 Gene3D G3DSA:3.40.50.970 3 301 2.0E-69 T 15-10-2018 THII_2496 2a29beece584fde80a8ad0e99194ed24 205 ProSitePatterns PS00517 Ribonuclease III family signature. 16 24 - T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 THII_2496 2a29beece584fde80a8ad0e99194ed24 205 SMART SM00535 1 127 2.8E-47 T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 THII_2496 2a29beece584fde80a8ad0e99194ed24 205 Gene3D G3DSA:1.10.1520.10 1 126 3.3E-38 T 15-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 THII_2496 2a29beece584fde80a8ad0e99194ed24 205 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 1 200 2.8E-67 T 15-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 THII_2496 2a29beece584fde80a8ad0e99194ed24 205 SMART SM00358 134 203 1.6E-17 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain THII_2496 2a29beece584fde80a8ad0e99194ed24 205 Pfam PF00035 Double-stranded RNA binding motif 134 202 6.9E-11 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain THII_2496 2a29beece584fde80a8ad0e99194ed24 205 Pfam PF14622 Ribonuclease-III-like 3 117 7.1E-33 T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 THII_2496 2a29beece584fde80a8ad0e99194ed24 205 SUPERFAMILY SSF69065 1 137 6.98E-43 T 15-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 THII_2496 2a29beece584fde80a8ad0e99194ed24 205 Hamap MF_00104 Ribonuclease 3 [rnc]. 1 199 24.634 T 15-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 THII_2496 2a29beece584fde80a8ad0e99194ed24 205 Gene3D G3DSA:3.30.160.20 132 203 2.9E-18 T 15-10-2018 THII_2496 2a29beece584fde80a8ad0e99194ed24 205 SUPERFAMILY SSF54768 88 203 6.13E-24 T 15-10-2018 THII_3883 7ed21949d3be030016e548909e3070d0 383 Pfam PF13098 Thioredoxin-like domain 245 368 4.3E-28 T 15-10-2018 IPR012336 Thioredoxin-like fold THII_3883 7ed21949d3be030016e548909e3070d0 383 Gene3D G3DSA:3.40.30.10 215 372 5.9E-48 T 15-10-2018 THII_3883 7ed21949d3be030016e548909e3070d0 383 SUPERFAMILY SSF52833 228 370 3.2E-35 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_3883 7ed21949d3be030016e548909e3070d0 383 SUPERFAMILY SSF54423 169 217 1.55E-10 T 15-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 THII_3883 7ed21949d3be030016e548909e3070d0 383 Gene3D G3DSA:3.10.450.70 157 214 2.2E-11 T 15-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 THII_3883 7ed21949d3be030016e548909e3070d0 383 Pfam PF10411 Disulfide bond isomerase protein N-terminus 162 214 2.3E-13 T 15-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal THII_2909 5bcba7cea5f261f6c756f987e90ec754 132 Pfam PF03610 PTS system fructose IIA component 4 104 9.8E-17 T 15-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 THII_2909 5bcba7cea5f261f6c756f987e90ec754 132 SUPERFAMILY SSF53062 1 129 1.83E-29 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 THII_2909 5bcba7cea5f261f6c756f987e90ec754 132 Gene3D G3DSA:3.40.50.510 2 132 1.1E-32 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 THII_0227 bfd6f6c4d7461c658eaea1513ea22e0f 79 Pfam PF10047 Protein of unknown function (DUF2281) 46 77 3.1E-7 T 15-10-2018 IPR018739 Domain of unknown function DUF2281 THII_1090 d73a0751153329fc1f70aea344a43e5e 161 Pfam PF01724 Domain of unknown function DUF29 14 157 3.8E-49 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1090 d73a0751153329fc1f70aea344a43e5e 161 Gene3D G3DSA:1.20.1220.20 7 161 6.4E-30 T 15-10-2018 THII_3513 df1da37d7b0f711d0ba0d789e2753385 320 Gene3D G3DSA:1.10.530.10 54 303 4.4E-117 T 15-10-2018 THII_3513 df1da37d7b0f711d0ba0d789e2753385 320 Gene3D G3DSA:1.10.8.350 19 188 4.4E-117 T 15-10-2018 THII_3513 df1da37d7b0f711d0ba0d789e2753385 320 SUPERFAMILY SSF53955 16 309 4.5E-86 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_3513 df1da37d7b0f711d0ba0d789e2753385 320 Pfam PF13406 Transglycosylase SLT domain 16 304 7.2E-103 T 15-10-2018 IPR031304 Transglycosylase SLT domain 2 THII_3513 df1da37d7b0f711d0ba0d789e2753385 320 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 16 306 6.9E-116 T 15-10-2018 IPR011757 Lytic transglycosylase MltB THII_3915 d5a87cb3b03b7dc74d5713f81753765f 415 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 7 80 2.1E-18 T 15-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 THII_3915 d5a87cb3b03b7dc74d5713f81753765f 415 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 207 412 8.6E-63 T 15-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 THII_3915 d5a87cb3b03b7dc74d5713f81753765f 415 Pfam PF07670 Nucleoside recognition 100 199 1.6E-6 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 THII_3238 d7fd339af6316ecc648135d9570e7ed3 294 Pfam PF12784 PD-(D/E)XK nuclease family transposase 9 245 1.7E-24 T 15-10-2018 THII_3238 d7fd339af6316ecc648135d9570e7ed3 294 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 293 2.0E-29 T 15-10-2018 IPR010106 Recombination-promoting nuclease RpnA THII_0090 837e7ffbbb945b660159114c45cd8467 317 SUPERFAMILY SSF51735 1 312 1.41E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0090 837e7ffbbb945b660159114c45cd8467 317 Gene3D G3DSA:3.90.25.10 168 296 9.9E-124 T 15-10-2018 THII_0090 837e7ffbbb945b660159114c45cd8467 317 Gene3D G3DSA:3.40.50.720 3 308 9.9E-124 T 15-10-2018 THII_0090 837e7ffbbb945b660159114c45cd8467 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 242 1.6E-45 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 THII_0090 837e7ffbbb945b660159114c45cd8467 317 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 314 2.5E-132 T 15-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 THII_0090 837e7ffbbb945b660159114c45cd8467 317 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 315 48.938 T 15-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 THII_0555 5e0857b7f0538bdc73bb0fc40d4e15aa 122 SMART SM00448 2 116 1.5E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0555 5e0857b7f0538bdc73bb0fc40d4e15aa 122 SUPERFAMILY SSF52172 1 120 2.13E-34 T 15-10-2018 IPR011006 CheY-like superfamily THII_0555 5e0857b7f0538bdc73bb0fc40d4e15aa 122 Pfam PF00072 Response regulator receiver domain 4 116 1.8E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0555 5e0857b7f0538bdc73bb0fc40d4e15aa 122 Gene3D G3DSA:3.40.50.12740 2 122 2.6E-35 T 15-10-2018 THII_0615 4be4f3d2c75adc73d064cfbc22492f28 100 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 99 3.5E-31 T 15-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 THII_0615 4be4f3d2c75adc73d064cfbc22492f28 100 SUPERFAMILY SSF75169 1 99 1.01E-28 T 15-10-2018 IPR027396 DsrEFH-like THII_0615 4be4f3d2c75adc73d064cfbc22492f28 100 Pfam PF04077 DsrH like protein 7 94 9.7E-28 T 15-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 THII_0615 4be4f3d2c75adc73d064cfbc22492f28 100 Gene3D G3DSA:3.40.1260.10 1 100 6.0E-34 T 15-10-2018 IPR027396 DsrEFH-like THII_2428 314cb3923a1358b6e91a7e894dcd6e67 397 Gene3D G3DSA:1.10.10.10 319 395 5.5E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2428 314cb3923a1358b6e91a7e894dcd6e67 397 SUPERFAMILY SSF47781 5 49 4.45E-5 T 15-10-2018 IPR010994 RuvA domain 2-like THII_2428 314cb3923a1358b6e91a7e894dcd6e67 397 Gene3D G3DSA:3.40.50.450 1 293 6.3E-102 T 15-10-2018 THII_2428 314cb3923a1358b6e91a7e894dcd6e67 397 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 290 2.8E-75 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 THII_2428 314cb3923a1358b6e91a7e894dcd6e67 397 SUPERFAMILY SSF102405 83 290 8.7E-41 T 15-10-2018 THII_2428 314cb3923a1358b6e91a7e894dcd6e67 397 Pfam PF02481 DNA recombination-mediator protein A 75 281 2.0E-74 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 THII_1584 432182240982ea5a233f61542c1f104d 698 Gene3D G3DSA:3.40.190.10 31 241 9.1E-24 T 15-10-2018 THII_1584 432182240982ea5a233f61542c1f104d 698 Gene3D G3DSA:3.40.190.10 108 204 9.1E-24 T 15-10-2018 THII_1584 432182240982ea5a233f61542c1f104d 698 Gene3D G3DSA:3.40.190.10 555 653 3.4E-23 T 15-10-2018 THII_1584 432182240982ea5a233f61542c1f104d 698 SMART SM00062 25 247 0.0093 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_1584 432182240982ea5a233f61542c1f104d 698 SMART SM00062 473 694 0.01 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_1584 432182240982ea5a233f61542c1f104d 698 SUPERFAMILY SSF53850 475 693 2.08E-33 T 15-10-2018 THII_1584 432182240982ea5a233f61542c1f104d 698 SUPERFAMILY SSF53850 24 241 1.25E-32 T 15-10-2018 THII_1584 432182240982ea5a233f61542c1f104d 698 Gene3D G3DSA:3.40.50.2300 256 466 1.9E-63 T 15-10-2018 THII_1584 432182240982ea5a233f61542c1f104d 698 Gene3D G3DSA:3.40.190.10 479 692 3.4E-23 T 15-10-2018 THII_1584 432182240982ea5a233f61542c1f104d 698 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 479 693 2.2E-20 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_1584 432182240982ea5a233f61542c1f104d 698 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 242 8.0E-18 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_1584 432182240982ea5a233f61542c1f104d 698 SUPERFAMILY SSF53822 235 344 7.59E-5 T 15-10-2018 IPR028082 Periplasmic binding protein-like I THII_0546 5226e7753be52d9aab996621cb086446 82 Gene3D G3DSA:2.10.260.10 2 42 6.6E-10 T 15-10-2018 THII_0546 5226e7753be52d9aab996621cb086446 82 SMART SM00966 4 49 7.9E-6 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 THII_0546 5226e7753be52d9aab996621cb086446 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 44 3.1E-9 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 THII_0546 5226e7753be52d9aab996621cb086446 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 46 8.9E-6 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 THII_0546 5226e7753be52d9aab996621cb086446 82 SUPERFAMILY SSF89447 1 44 1.92E-9 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily THII_0046 73d699a77d206dc89153905f51d4e448 157 Pfam PF01724 Domain of unknown function DUF29 8 155 1.0E-38 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0046 73d699a77d206dc89153905f51d4e448 157 Gene3D G3DSA:1.20.1220.20 2 157 1.1E-19 T 15-10-2018 THII_1503 41fafe20c5de8572c80725bea36b77d8 597 SMART SM00382 383 563 4.6E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1503 41fafe20c5de8572c80725bea36b77d8 597 Pfam PF00005 ABC transporter 375 523 3.1E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_1503 41fafe20c5de8572c80725bea36b77d8 597 SUPERFAMILY SSF52540 348 593 5.97E-89 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1503 41fafe20c5de8572c80725bea36b77d8 597 Gene3D G3DSA:3.40.50.300 348 597 8.0E-93 T 15-10-2018 THII_1503 41fafe20c5de8572c80725bea36b77d8 597 Pfam PF00664 ABC transporter transmembrane region 38 311 6.3E-38 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 THII_1503 41fafe20c5de8572c80725bea36b77d8 597 SUPERFAMILY SSF90123 27 346 1.83E-61 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 THII_1503 41fafe20c5de8572c80725bea36b77d8 597 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_1503 41fafe20c5de8572c80725bea36b77d8 597 Gene3D G3DSA:1.20.1560.10 30 347 2.4E-110 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 THII_2619 a403503c0a46ad778a6849e7529a40d4 84 Pfam PF13358 DDE superfamily endonuclease 9 72 1.1E-17 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_2619 a403503c0a46ad778a6849e7529a40d4 84 SUPERFAMILY SSF53098 7 74 1.52E-5 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_2619 a403503c0a46ad778a6849e7529a40d4 84 Gene3D G3DSA:3.30.420.470 1 81 4.6E-13 T 15-10-2018 THII_1106 71f02f625944e2be2c8120352d983b41 449 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 441 1.2E-175 T 15-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 THII_1106 71f02f625944e2be2c8120352d983b41 449 Pfam PF00202 Aminotransferase class-III 26 438 2.1E-126 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 THII_1106 71f02f625944e2be2c8120352d983b41 449 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 446 49.604 T 15-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 THII_1106 71f02f625944e2be2c8120352d983b41 449 Gene3D G3DSA:3.90.1150.10 13 437 8.6E-162 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_1106 71f02f625944e2be2c8120352d983b41 449 SUPERFAMILY SSF53383 9 441 1.68E-126 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_1106 71f02f625944e2be2c8120352d983b41 449 PIRSF PIRSF000521 19 415 1.1E-29 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 THII_1106 71f02f625944e2be2c8120352d983b41 449 Gene3D G3DSA:3.40.640.10 64 341 8.6E-162 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_1106 71f02f625944e2be2c8120352d983b41 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 THII_2600 18fa4c9827f53eea252e7be9b3adae3b 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 4.6E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 THII_2600 18fa4c9827f53eea252e7be9b3adae3b 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 4.6E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 THII_2600 18fa4c9827f53eea252e7be9b3adae3b 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 25 40 4.6E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 THII_2600 18fa4c9827f53eea252e7be9b3adae3b 109 SMART SM00418 23 101 1.0E-26 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 THII_2600 18fa4c9827f53eea252e7be9b3adae3b 109 Pfam PF01022 Bacterial regulatory protein, arsR family 30 74 8.3E-15 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 THII_2600 18fa4c9827f53eea252e7be9b3adae3b 109 Gene3D G3DSA:1.10.10.10 2 104 2.0E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2600 18fa4c9827f53eea252e7be9b3adae3b 109 SUPERFAMILY SSF46785 9 104 2.97E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_0663 e3ba4c30e06cff0ec529b33f811666fc 284 Hamap MF_00158 Pantothenate synthetase [panC]. 3 281 38.724 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 THII_0663 e3ba4c30e06cff0ec529b33f811666fc 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 281 1.1E-96 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 THII_0663 e3ba4c30e06cff0ec529b33f811666fc 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 279 4.9E-100 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 THII_0663 e3ba4c30e06cff0ec529b33f811666fc 284 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 69 1.3E-8 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 THII_0663 e3ba4c30e06cff0ec529b33f811666fc 284 Gene3D G3DSA:3.40.50.620 1 180 2.1E-75 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0663 e3ba4c30e06cff0ec529b33f811666fc 284 SUPERFAMILY SSF52374 2 282 9.79E-103 T 15-10-2018 THII_0663 e3ba4c30e06cff0ec529b33f811666fc 284 Gene3D G3DSA:3.30.1300.10 182 283 8.4E-28 T 15-10-2018 THII_1781 6249572fba212468821eb68ac7d9ddc7 114 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 101 3.5E-27 T 15-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 THII_1781 6249572fba212468821eb68ac7d9ddc7 114 SUPERFAMILY SSF50022 1 105 1.18E-32 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 THII_1781 6249572fba212468821eb68ac7d9ddc7 114 Gene3D G3DSA:2.102.10.10 1 109 7.7E-25 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 THII_1781 6249572fba212468821eb68ac7d9ddc7 114 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 94 2.9E-15 T 15-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 THII_3359 ff45170405fbecb896677190487f015e 76 Gene3D G3DSA:1.10.10.10 6 74 2.3E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_3359 ff45170405fbecb896677190487f015e 76 Pfam PF04255 Protein of unknown function (DUF433) 7 62 1.4E-25 T 15-10-2018 IPR007367 Protein of unknown function DUF433 THII_3359 ff45170405fbecb896677190487f015e 76 SUPERFAMILY SSF46689 2 67 1.15E-20 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_1897 278abe55958921736880caa713d3cfb6 292 Gene3D G3DSA:1.10.3720.10 93 286 1.3E-37 T 15-10-2018 IPR035906 MetI-like superfamily THII_1897 278abe55958921736880caa713d3cfb6 292 SUPERFAMILY SSF161098 96 282 1.7E-42 T 15-10-2018 IPR035906 MetI-like superfamily THII_1897 278abe55958921736880caa713d3cfb6 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 276 9.8E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 THII_0914 81bd1d54c9b7f9b69feaf64aaa5ce7ce 501 Pfam PF00361 Proton-conducting membrane transporter 132 430 2.2E-56 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0914 81bd1d54c9b7f9b69feaf64aaa5ce7ce 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 3.3E-12 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0914 81bd1d54c9b7f9b69feaf64aaa5ce7ce 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 138 157 3.3E-12 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0914 81bd1d54c9b7f9b69feaf64aaa5ce7ce 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 3.3E-12 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0914 81bd1d54c9b7f9b69feaf64aaa5ce7ce 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 248 272 3.3E-12 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1817 2141f0e3c824bd202c74cb766de6aa40 154 Pfam PF03270 Protein of unknown function, DUF269 33 153 1.5E-48 T 15-10-2018 IPR004952 Uncharacterised protein family UPF0460 THII_1817 2141f0e3c824bd202c74cb766de6aa40 154 Gene3D G3DSA:1.10.3100.20 3 154 2.1E-54 T 15-10-2018 THII_1817 2141f0e3c824bd202c74cb766de6aa40 154 TIGRFAM TIGR02935 TIGR02935: probable nitrogen fixation protein 14 152 1.0E-56 T 15-10-2018 IPR004952 Uncharacterised protein family UPF0460 THII_1817 2141f0e3c824bd202c74cb766de6aa40 154 PIRSF PIRSF005788 2 154 1.1E-61 T 15-10-2018 IPR004952 Uncharacterised protein family UPF0460 THII_3668 fb3f7591024355e50b5ca609d4535587 180 SUPERFAMILY SSF56300 1 169 4.95E-28 T 15-10-2018 THII_3668 fb3f7591024355e50b5ca609d4535587 180 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 150 3.1E-16 T 15-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 THII_3668 fb3f7591024355e50b5ca609d4535587 180 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 160 1.1E-29 T 15-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 THII_3668 fb3f7591024355e50b5ca609d4535587 180 Gene3D G3DSA:3.60.21.10 1 167 3.9E-33 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like THII_0076 c94723ee1ca4f3a51e4540efca200649 534 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 255 270 - T 15-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 THII_0076 c94723ee1ca4f3a51e4540efca200649 534 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 12 533 1.7E-216 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 THII_0076 c94723ee1ca4f3a51e4540efca200649 534 SUPERFAMILY SSF53795 218 533 1.44E-130 T 15-10-2018 THII_0076 c94723ee1ca4f3a51e4540efca200649 534 Gene3D G3DSA:3.40.449.10 34 218 1.6E-225 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 THII_0076 c94723ee1ca4f3a51e4540efca200649 534 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 534 53.604 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 THII_0076 c94723ee1ca4f3a51e4540efca200649 534 SUPERFAMILY SSF68923 10 216 1.57E-82 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 THII_0076 c94723ee1ca4f3a51e4540efca200649 534 PIRSF PIRSF006294 5 534 1.3E-234 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 THII_0076 c94723ee1ca4f3a51e4540efca200649 534 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 487 5.8E-219 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 THII_0076 c94723ee1ca4f3a51e4540efca200649 534 Gene3D G3DSA:2.170.8.10 44 336 1.6E-225 T 15-10-2018 THII_0076 c94723ee1ca4f3a51e4540efca200649 534 Gene3D G3DSA:3.90.228.20 219 519 1.6E-225 T 15-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 THII_0885 285e0815728e9de065e820e1bae8dc46 150 Gene3D G3DSA:1.20.120.330 26 137 6.5E-7 T 15-10-2018 THII_0885 285e0815728e9de065e820e1bae8dc46 150 Pfam PF05168 HEPN domain 35 129 7.0E-5 T 15-10-2018 IPR007842 HEPN domain THII_0028 1e91fd4c3e8ac73e43eaea0081a1521c 281 Pfam PF00535 Glycosyl transferase family 2 9 133 1.5E-29 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0028 1e91fd4c3e8ac73e43eaea0081a1521c 281 SUPERFAMILY SSF53448 6 218 2.81E-49 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0028 1e91fd4c3e8ac73e43eaea0081a1521c 281 Gene3D G3DSA:3.90.550.10 1 247 3.2E-51 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0434 69c358f08e3a195bd1211480183a5f82 228 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 216 5.8E-62 T 15-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 THII_0434 69c358f08e3a195bd1211480183a5f82 228 SUPERFAMILY SSF100950 11 223 1.05E-57 T 15-10-2018 IPR037171 NagB/RpiA transferase-like THII_0434 69c358f08e3a195bd1211480183a5f82 228 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 14 222 3.6E-54 T 15-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 THII_0434 69c358f08e3a195bd1211480183a5f82 228 Gene3D G3DSA:3.40.50.1360 2 227 2.5E-64 T 15-10-2018 THII_1978 7a932f7f9a8f7aaedd2fba44a60bced1 572 Gene3D G3DSA:3.40.50.300 297 570 2.8E-99 T 15-10-2018 THII_1978 7a932f7f9a8f7aaedd2fba44a60bced1 572 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 47 146 3.6E-19 T 15-10-2018 IPR007831 General secretory system II, protein E, N-terminal THII_1978 7a932f7f9a8f7aaedd2fba44a60bced1 572 Gene3D G3DSA:3.30.300.160 67 147 4.4E-10 T 15-10-2018 THII_1978 7a932f7f9a8f7aaedd2fba44a60bced1 572 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 12 570 2.0E-251 T 15-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 THII_1978 7a932f7f9a8f7aaedd2fba44a60bced1 572 Gene3D G3DSA:3.30.450.90 157 293 1.7E-47 T 15-10-2018 THII_1978 7a932f7f9a8f7aaedd2fba44a60bced1 572 Pfam PF00437 Type II/IV secretion system protein 193 460 3.9E-85 T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_1978 7a932f7f9a8f7aaedd2fba44a60bced1 572 SUPERFAMILY SSF160246 8 145 5.36E-37 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily THII_1978 7a932f7f9a8f7aaedd2fba44a60bced1 572 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 388 402 - T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_1978 7a932f7f9a8f7aaedd2fba44a60bced1 572 SUPERFAMILY SSF52540 179 569 1.72E-91 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2849 d9a91cbff765444151a88f45e2b8f03a 117 Pfam PF10047 Protein of unknown function (DUF2281) 9 41 7.4E-7 T 15-10-2018 IPR018739 Domain of unknown function DUF2281 THII_1756 29956ce9583b7eeaa7d061004c943ff6 232 SUPERFAMILY SSF56925 27 232 6.54E-29 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel THII_1756 29956ce9583b7eeaa7d061004c943ff6 232 Gene3D G3DSA:2.40.160.20 26 232 5.3E-65 T 15-10-2018 THII_1756 29956ce9583b7eeaa7d061004c943ff6 232 Pfam PF03922 OmpW family 28 232 1.4E-54 T 15-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 THII_2733 3f1143f1939df647e0591a666a3693ad 187 Pfam PF05685 Putative restriction endonuclease 14 181 9.3E-29 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2733 3f1143f1939df647e0591a666a3693ad 187 Gene3D G3DSA:3.90.1570.10 4 187 1.1E-14 T 15-10-2018 THII_2733 3f1143f1939df647e0591a666a3693ad 187 SUPERFAMILY SSF52980 8 185 2.73E-20 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0209 d41018375d7c56337829acc4da0786cf 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 37.902 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 THII_0209 d41018375d7c56337829acc4da0786cf 276 Gene3D G3DSA:3.10.310.10 117 263 3.6E-101 T 15-10-2018 THII_0209 d41018375d7c56337829acc4da0786cf 276 SUPERFAMILY SSF54506 136 275 1.71E-49 T 15-10-2018 THII_0209 d41018375d7c56337829acc4da0786cf 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 15-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 THII_0209 d41018375d7c56337829acc4da0786cf 276 Gene3D G3DSA:3.10.310.10 5 272 3.6E-101 T 15-10-2018 THII_0209 d41018375d7c56337829acc4da0786cf 276 Pfam PF01678 Diaminopimelate epimerase 5 124 9.9E-30 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 THII_0209 d41018375d7c56337829acc4da0786cf 276 Pfam PF01678 Diaminopimelate epimerase 154 269 7.9E-27 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 THII_0209 d41018375d7c56337829acc4da0786cf 276 SUPERFAMILY SSF54506 3 132 7.85E-48 T 15-10-2018 THII_0209 d41018375d7c56337829acc4da0786cf 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 274 8.0E-91 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 THII_2946 d0f5c707cc953a4c400e3bd6b076bf4d 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 2.6E-40 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2946 d0f5c707cc953a4c400e3bd6b076bf4d 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 2.6E-40 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2946 d0f5c707cc953a4c400e3bd6b076bf4d 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 138 157 2.6E-40 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2946 d0f5c707cc953a4c400e3bd6b076bf4d 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 168 192 2.6E-40 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2946 d0f5c707cc953a4c400e3bd6b076bf4d 507 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 66 126 1.4E-5 T 15-10-2018 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2946 d0f5c707cc953a4c400e3bd6b076bf4d 507 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 8 498 1.8E-187 T 15-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2946 d0f5c707cc953a4c400e3bd6b076bf4d 507 Pfam PF00361 Proton-conducting membrane transporter 132 427 4.0E-74 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1056 f8339adbbc518a258a4941450b3b59c5 208 Gene3D G3DSA:3.40.50.300 3 199 3.9E-32 T 15-10-2018 THII_1056 f8339adbbc518a258a4941450b3b59c5 208 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 178 1.7E-14 T 15-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain THII_1056 f8339adbbc518a258a4941450b3b59c5 208 SUPERFAMILY SSF52540 2 181 4.5E-29 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2593 d2fbf6ec0a3065858dedb075876b767f 129 SMART SM00530 6 61 7.6E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2593 d2fbf6ec0a3065858dedb075876b767f 129 Gene3D G3DSA:1.10.260.40 1 128 2.8E-16 T 15-10-2018 THII_2593 d2fbf6ec0a3065858dedb075876b767f 129 SUPERFAMILY SSF47413 1 67 4.22E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_2593 d2fbf6ec0a3065858dedb075876b767f 129 Pfam PF01381 Helix-turn-helix 7 61 3.0E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 2.4E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 533 2.4E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 495 2.4E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 514 2.4E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 SUPERFAMILY SSF47384 308 385 1.67E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 SMART SM00387 428 536 3.2E-24 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 Gene3D G3DSA:1.10.287.130 307 384 6.9E-17 T 15-10-2018 THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 533 6.8E-13 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 Gene3D G3DSA:3.30.565.10 387 535 2.4E-25 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 Gene3D G3DSA:3.30.450.20 199 306 8.2E-9 T 15-10-2018 THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 Pfam PF00512 His Kinase A (phospho-acceptor) domain 320 384 2.6E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 SMART SM00388 320 386 1.5E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 SUPERFAMILY SSF55874 376 534 3.93E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_2753 25b5e2a9cfc0f0f22c0fe3fad86e9ca1 537 Pfam PF13188 PAS domain 210 262 0.0031 T 15-10-2018 IPR000014 PAS domain THII_2249 3d45a7843e76d180fe48562f23d22d07 197 Gene3D G3DSA:3.30.420.470 1 189 8.2E-14 T 15-10-2018 THII_2249 3d45a7843e76d180fe48562f23d22d07 197 Pfam PF13358 DDE superfamily endonuclease 32 168 1.5E-17 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_0296 5c3a75688aed0978851c07826ee2523a 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 118 24.895 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0296 5c3a75688aed0978851c07826ee2523a 118 SUPERFAMILY SSF53137 4 116 3.71E-49 T 15-10-2018 THII_0296 5c3a75688aed0978851c07826ee2523a 118 Gene3D G3DSA:3.30.420.100 2 118 7.5E-41 T 15-10-2018 THII_0296 5c3a75688aed0978851c07826ee2523a 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 118 7.9E-37 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0296 5c3a75688aed0978851c07826ee2523a 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 118 3.6E-37 T 15-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3093 a99e273c67fa56bb3fbfc7cbe382abfa 278 Gene3D G3DSA:3.20.20.220 1 278 5.0E-98 T 15-10-2018 THII_3093 a99e273c67fa56bb3fbfc7cbe382abfa 278 Pfam PF02219 Methylenetetrahydrofolate reductase 1 271 2.0E-90 T 15-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 THII_3093 a99e273c67fa56bb3fbfc7cbe382abfa 278 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 1 271 1.0E-101 T 15-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 THII_3093 a99e273c67fa56bb3fbfc7cbe382abfa 278 SUPERFAMILY SSF51730 2 273 1.37E-91 T 15-10-2018 IPR029041 FAD-linked oxidoreductase-like THII_2488 e1c96589f0debf58ffa5148141e3342c 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 THII_2488 e1c96589f0debf58ffa5148141e3342c 245 Pfam PF00106 short chain dehydrogenase 15 210 7.5E-48 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2488 e1c96589f0debf58ffa5148141e3342c 245 SUPERFAMILY SSF51735 13 245 2.76E-60 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2488 e1c96589f0debf58ffa5148141e3342c 245 Gene3D G3DSA:3.40.50.720 3 245 2.2E-67 T 15-10-2018 THII_2488 e1c96589f0debf58ffa5148141e3342c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.1E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2488 e1c96589f0debf58ffa5148141e3342c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.1E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2488 e1c96589f0debf58ffa5148141e3342c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.1E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2488 e1c96589f0debf58ffa5148141e3342c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.1E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_2488 e1c96589f0debf58ffa5148141e3342c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.1E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR THII_3286 5bfa95d2d6835c2b935ad29c713d82c2 207 SUPERFAMILY SSF53335 6 191 3.01E-27 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3286 5bfa95d2d6835c2b935ad29c713d82c2 207 Gene3D G3DSA:3.40.50.150 4 179 2.1E-23 T 15-10-2018 THII_3286 5bfa95d2d6835c2b935ad29c713d82c2 207 Pfam PF07021 Methionine biosynthesis protein MetW 4 195 5.9E-77 T 15-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 THII_3286 5bfa95d2d6835c2b935ad29c713d82c2 207 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 4 196 1.5E-77 T 15-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 THII_1409 3b91e6532d0c12ada747a6e6bee0f748 123 Gene3D G3DSA:3.40.50.720 2 123 7.3E-31 T 15-10-2018 THII_1409 3b91e6532d0c12ada747a6e6bee0f748 123 SUPERFAMILY SSF51735 2 122 4.14E-27 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1409 3b91e6532d0c12ada747a6e6bee0f748 123 SMART SM00881 1 93 2.7E-4 T 15-10-2018 IPR003781 CoA-binding GO:0048037 THII_1409 3b91e6532d0c12ada747a6e6bee0f748 123 Pfam PF13380 CoA binding domain 6 118 1.6E-26 T 15-10-2018 IPR003781 CoA-binding GO:0048037 THII_0111 f805941d56acfa96b2d1bd7a8d7ea847 172 Gene3D G3DSA:2.60.40.1890 40 156 2.1E-34 T 15-10-2018 IPR036182 Copper chaperone PCuAC superfamily THII_0111 f805941d56acfa96b2d1bd7a8d7ea847 172 Pfam PF04314 Copper chaperone PCu(A)C 37 143 6.0E-30 T 15-10-2018 IPR007410 Copper chaperone PCuAC THII_0111 f805941d56acfa96b2d1bd7a8d7ea847 172 SUPERFAMILY SSF110087 5 153 9.68E-41 T 15-10-2018 IPR036182 Copper chaperone PCuAC superfamily THII_3638 8b2a9be7fb14e837469d55043dbbfb88 405 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 21 305 6.5E-58 T 15-10-2018 IPR018712 Domain of unknown function DUF2235 THII_3638 8b2a9be7fb14e837469d55043dbbfb88 405 SUPERFAMILY SSF53474 18 172 3.37E-5 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_0966 300fc5825a3910398f92855f3f30c1e6 264 SUPERFAMILY SSF53474 14 261 1.3E-40 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_0966 300fc5825a3910398f92855f3f30c1e6 264 Gene3D G3DSA:3.40.50.1820 10 262 2.7E-38 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_0966 300fc5825a3910398f92855f3f30c1e6 264 Pfam PF12146 Serine aminopeptidase, S33 16 246 2.3E-22 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 THII_2135 486adbff59429a4433b13e407085466d 95 SUPERFAMILY SSF47240 6 93 1.07E-23 T 15-10-2018 IPR009078 Ferritin-like superfamily THII_2135 486adbff59429a4433b13e407085466d 95 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 6 93 1.1E-39 T 15-10-2018 IPR030907 Ferritin-like protein THII_1570 514408cab5b25df40229b0808df2a977 233 SUPERFAMILY SSF52172 6 189 1.05E-39 T 15-10-2018 IPR011006 CheY-like superfamily THII_1570 514408cab5b25df40229b0808df2a977 233 SMART SM00448 8 118 1.5E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1570 514408cab5b25df40229b0808df2a977 233 Gene3D G3DSA:1.10.10.10 134 232 9.4E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1570 514408cab5b25df40229b0808df2a977 233 Pfam PF00072 Response regulator receiver domain 10 119 1.4E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1570 514408cab5b25df40229b0808df2a977 233 Gene3D G3DSA:3.40.50.2300 1 133 1.3E-36 T 15-10-2018 THII_1570 514408cab5b25df40229b0808df2a977 233 SMART SM00862 154 230 3.5E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_1570 514408cab5b25df40229b0808df2a977 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 6.4E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 THII_1710 68aa8232fa4c6d83d2f2c12dacefe3d1 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 153 6.1E-4 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1710 68aa8232fa4c6d83d2f2c12dacefe3d1 182 SUPERFAMILY SSF51161 18 177 1.26E-34 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_1710 68aa8232fa4c6d83d2f2c12dacefe3d1 182 Gene3D G3DSA:2.160.10.10 13 180 8.5E-34 T 15-10-2018 THII_2908 bf78ea15c44761f25e916ff3cb1c38bd 89 SUPERFAMILY SSF55594 1 88 1.27E-27 T 15-10-2018 IPR035895 HPr-like superfamily THII_2908 bf78ea15c44761f25e916ff3cb1c38bd 89 Gene3D G3DSA:3.30.1340.10 1 88 2.7E-31 T 15-10-2018 IPR035895 HPr-like superfamily THII_2908 bf78ea15c44761f25e916ff3cb1c38bd 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 7.5E-31 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like THII_2908 bf78ea15c44761f25e916ff3cb1c38bd 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 8.1E-28 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like THII_2908 bf78ea15c44761f25e916ff3cb1c38bd 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 15-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site THII_2908 bf78ea15c44761f25e916ff3cb1c38bd 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.0E-15 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like THII_2908 bf78ea15c44761f25e916ff3cb1c38bd 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.0E-15 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like THII_2908 bf78ea15c44761f25e916ff3cb1c38bd 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.0E-15 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like THII_0068 e080bf8bfeabca65c61e815d33d1fb15 346 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0068 e080bf8bfeabca65c61e815d33d1fb15 346 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0068 e080bf8bfeabca65c61e815d33d1fb15 346 Gene3D G3DSA:3.20.20.140 2 344 1.3E-107 T 15-10-2018 THII_0068 e080bf8bfeabca65c61e815d33d1fb15 346 SUPERFAMILY SSF51556 3 342 1.36E-144 T 15-10-2018 IPR032466 Metal-dependent hydrolase THII_0068 e080bf8bfeabca65c61e815d33d1fb15 346 Hamap MF_00219 Dihydroorotase [pyrC]. 2 344 47.126 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0068 e080bf8bfeabca65c61e815d33d1fb15 346 Pfam PF01979 Amidohydrolase family 11 305 2.0E-13 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 THII_0068 e080bf8bfeabca65c61e815d33d1fb15 346 PIRSF PIRSF001237 1 346 1.3E-145 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_0068 e080bf8bfeabca65c61e815d33d1fb15 346 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 9.5E-142 T 15-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 THII_1697 572fa5f1f3a55b0db9ab1787f504b2e0 406 PIRSF PIRSF000390 13 406 1.4E-83 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_1697 572fa5f1f3a55b0db9ab1787f504b2e0 406 Gene3D G3DSA:3.90.1150.10 275 406 1.6E-40 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_1697 572fa5f1f3a55b0db9ab1787f504b2e0 406 SUPERFAMILY SSF53383 14 404 2.56E-86 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_1697 572fa5f1f3a55b0db9ab1787f504b2e0 406 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 22 399 4.0E-77 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_1697 572fa5f1f3a55b0db9ab1787f504b2e0 406 Gene3D G3DSA:3.40.640.10 9 273 9.6E-72 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_3422 574fd474d4fb44ab032572793b1dee1d 186 SUPERFAMILY SSF52540 11 174 4.12E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3422 574fd474d4fb44ab032572793b1dee1d 186 Gene3D G3DSA:3.40.50.300 8 183 2.4E-55 T 15-10-2018 THII_3422 574fd474d4fb44ab032572793b1dee1d 186 PRINTS PR01100 Shikimate kinase family signature 36 49 6.8E-27 T 15-10-2018 THII_3422 574fd474d4fb44ab032572793b1dee1d 186 PRINTS PR01100 Shikimate kinase family signature 103 120 6.8E-27 T 15-10-2018 THII_3422 574fd474d4fb44ab032572793b1dee1d 186 PRINTS PR01100 Shikimate kinase family signature 82 91 6.8E-27 T 15-10-2018 THII_3422 574fd474d4fb44ab032572793b1dee1d 186 PRINTS PR01100 Shikimate kinase family signature 12 27 6.8E-27 T 15-10-2018 THII_3422 574fd474d4fb44ab032572793b1dee1d 186 PRINTS PR01100 Shikimate kinase family signature 64 72 6.8E-27 T 15-10-2018 THII_3422 574fd474d4fb44ab032572793b1dee1d 186 Hamap MF_00109 Shikimate kinase [aroK]. 9 175 29.797 T 15-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 THII_3422 574fd474d4fb44ab032572793b1dee1d 186 ProSitePatterns PS01128 Shikimate kinase signature. 65 90 - T 15-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 THII_3422 574fd474d4fb44ab032572793b1dee1d 186 Pfam PF01202 Shikimate kinase 18 174 8.3E-51 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 THII_0329 33b702f9dffbd141a0910704c34e664a 185 Pfam PF00805 Pentapeptide repeats (8 copies) 34 72 4.2E-12 T 15-10-2018 IPR001646 Pentapeptide repeat THII_0329 33b702f9dffbd141a0910704c34e664a 185 Pfam PF00805 Pentapeptide repeats (8 copies) 119 158 6.3E-15 T 15-10-2018 IPR001646 Pentapeptide repeat THII_0329 33b702f9dffbd141a0910704c34e664a 185 Gene3D G3DSA:2.160.20.80 3 94 3.5E-23 T 15-10-2018 THII_0329 33b702f9dffbd141a0910704c34e664a 185 Gene3D G3DSA:2.160.20.100 95 182 2.2E-29 T 15-10-2018 THII_0329 33b702f9dffbd141a0910704c34e664a 185 SUPERFAMILY SSF141571 23 179 2.28E-45 T 15-10-2018 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 SMART SM00387 278 389 6.2E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0803 e916751a8f797995b64b0b7582f09bb9 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 282 387 2.3E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0803 e916751a8f797995b64b0b7582f09bb9 397 Gene3D G3DSA:1.25.40.10 2 152 1.3E-31 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 Pfam PF13414 TPR repeat 69 110 7.4E-11 T 15-10-2018 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 SUPERFAMILY SSF47384 160 232 2.16E-8 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 Gene3D G3DSA:1.10.287.130 153 231 3.4E-13 T 15-10-2018 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 SMART SM00028 62 95 1.8E-5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 SMART SM00028 27 60 3.8E-7 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 SMART SM00028 96 129 2.4E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 SMART SM00388 164 234 1.1E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 386 2.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 346 2.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 367 2.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 332 2.1E-16 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 Gene3D G3DSA:3.30.565.10 233 395 2.3E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0803 e916751a8f797995b64b0b7582f09bb9 397 Pfam PF00512 His Kinase A (phospho-acceptor) domain 166 232 1.3E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 SUPERFAMILY SSF55874 222 387 1.31E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0803 e916751a8f797995b64b0b7582f09bb9 397 SUPERFAMILY SSF48452 7 141 1.19E-33 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0803 e916751a8f797995b64b0b7582f09bb9 397 Pfam PF00515 Tetratricopeptide repeat 27 60 9.2E-9 T 15-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 THII_3732 062c933458d45bcd7ddee3a249939c31 234 Pfam PF09601 Protein of unknown function (DUF2459) 37 196 3.7E-42 T 15-10-2018 IPR011727 Conserved hypothetical protein CHP02117 THII_3732 062c933458d45bcd7ddee3a249939c31 234 TIGRFAM TIGR02117 chp_urease_rgn: conserved hypothetical protein 5 205 9.3E-50 T 15-10-2018 IPR011727 Conserved hypothetical protein CHP02117 THII_0446 1c12bf27309881b2fadecaa969f4e197 237 SUPERFAMILY SSF53448 8 227 6.11E-30 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0446 1c12bf27309881b2fadecaa969f4e197 237 Gene3D G3DSA:3.90.550.10 5 235 7.5E-34 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0446 1c12bf27309881b2fadecaa969f4e197 237 Pfam PF00535 Glycosyl transferase family 2 10 133 1.7E-20 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_2780 7c3af4946bf42d77c838e3e654dc7a0c 89 SUPERFAMILY SSF53649 31 78 7.85E-16 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 THII_2780 7c3af4946bf42d77c838e3e654dc7a0c 89 Gene3D G3DSA:3.40.720.10 30 87 1.8E-15 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 THII_2780 7c3af4946bf42d77c838e3e654dc7a0c 89 Pfam PF00884 Sulfatase 33 81 1.7E-10 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 THII_3704 d998411b264cc97d4e7f86c90bf5b47f 361 SUPERFAMILY SSF144052 226 346 4.32E-9 T 15-10-2018 THII_0125 b279dbe2f5fb483514e4876c9db32ce1 95 SUPERFAMILY SSF69786 2 90 9.29E-30 T 15-10-2018 IPR036591 YggU-like superfamily THII_0125 b279dbe2f5fb483514e4876c9db32ce1 95 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.198 T 15-10-2018 IPR003746 Protein of unknown function DUF167 THII_0125 b279dbe2f5fb483514e4876c9db32ce1 95 SMART SM01152 7 83 5.0E-33 T 15-10-2018 IPR003746 Protein of unknown function DUF167 THII_0125 b279dbe2f5fb483514e4876c9db32ce1 95 Gene3D G3DSA:3.30.1200.10 1 93 7.2E-30 T 15-10-2018 IPR036591 YggU-like superfamily THII_0125 b279dbe2f5fb483514e4876c9db32ce1 95 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 83 4.4E-17 T 15-10-2018 IPR005228 Conserved hypothetical protein CHP00251 THII_0125 b279dbe2f5fb483514e4876c9db32ce1 95 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 3.2E-24 T 15-10-2018 IPR003746 Protein of unknown function DUF167 THII_2345 95e47170286052a850f417e7fd5921a7 459 Pfam PF02954 Bacterial regulatory protein, Fis family 405 446 7.6E-7 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 THII_2345 95e47170286052a850f417e7fd5921a7 459 Pfam PF00158 Sigma-54 interaction domain 141 307 6.1E-66 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 THII_2345 95e47170286052a850f417e7fd5921a7 459 SMART SM00382 161 304 2.3E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2345 95e47170286052a850f417e7fd5921a7 459 Pfam PF00072 Response regulator receiver domain 6 113 1.7E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2345 95e47170286052a850f417e7fd5921a7 459 SUPERFAMILY SSF52540 141 381 5.32E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2345 95e47170286052a850f417e7fd5921a7 459 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site THII_2345 95e47170286052a850f417e7fd5921a7 459 SUPERFAMILY SSF52172 4 185 1.57E-35 T 15-10-2018 IPR011006 CheY-like superfamily THII_2345 95e47170286052a850f417e7fd5921a7 459 SMART SM00448 4 113 2.7E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2345 95e47170286052a850f417e7fd5921a7 459 Gene3D G3DSA:1.10.10.60 400 450 5.1E-11 T 15-10-2018 THII_2345 95e47170286052a850f417e7fd5921a7 459 Gene3D G3DSA:1.10.8.60 312 391 4.0E-24 T 15-10-2018 THII_2345 95e47170286052a850f417e7fd5921a7 459 Gene3D G3DSA:3.40.50.300 126 311 3.9E-65 T 15-10-2018 THII_2345 95e47170286052a850f417e7fd5921a7 459 SUPERFAMILY SSF46689 353 448 6.09E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_2345 95e47170286052a850f417e7fd5921a7 459 Gene3D G3DSA:3.40.50.2300 5 121 1.1E-25 T 15-10-2018 THII_2345 95e47170286052a850f417e7fd5921a7 459 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THII_2554 37130622453bdec66cee96151823ba34 553 Gene3D G3DSA:2.30.40.10 2 80 1.4E-7 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 THII_2554 37130622453bdec66cee96151823ba34 553 PIRSF PIRSF006453 1 551 8.9E-213 T 15-10-2018 IPR012027 Formylmethanofuran dehydrogenase, subunit A THII_2554 37130622453bdec66cee96151823ba34 553 Pfam PF07969 Amidohydrolase family 43 492 2.2E-49 T 15-10-2018 IPR013108 Amidohydrolase 3 THII_2554 37130622453bdec66cee96151823ba34 553 SUPERFAMILY SSF51338 3 64 6.17E-8 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 THII_2554 37130622453bdec66cee96151823ba34 553 SUPERFAMILY SSF51338 423 506 8.41E-20 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 THII_2554 37130622453bdec66cee96151823ba34 553 SUPERFAMILY SSF51556 55 449 1.33E-20 T 15-10-2018 IPR032466 Metal-dependent hydrolase THII_2554 37130622453bdec66cee96151823ba34 553 TIGRFAM TIGR03121 one_C_dehyd_A: formylmethanofuran dehydrogenase subunit A 3 536 3.0E-208 T 15-10-2018 IPR012027 Formylmethanofuran dehydrogenase, subunit A THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 SUPERFAMILY SSF51621 2 339 1.61E-94 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 474 2.7E-163 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 SUPERFAMILY SSF50800 71 166 3.14E-24 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 Gene3D G3DSA:3.20.20.60 3 335 5.4E-164 T 15-10-2018 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 Gene3D G3DSA:3.40.1380.20 336 470 5.4E-164 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 PRINTS PR01050 Pyruvate kinase family signature 217 243 3.7E-60 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 PRINTS PR01050 Pyruvate kinase family signature 269 293 3.7E-60 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 PRINTS PR01050 Pyruvate kinase family signature 313 329 3.7E-60 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 PRINTS PR01050 Pyruvate kinase family signature 244 268 3.7E-60 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 PRINTS PR01050 Pyruvate kinase family signature 294 312 3.7E-60 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 PRINTS PR01050 Pyruvate kinase family signature 60 76 3.7E-60 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 PRINTS PR01050 Pyruvate kinase family signature 187 201 3.7E-60 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 472 4.8E-28 T 15-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 Gene3D G3DSA:2.40.33.10 71 169 5.4E-164 T 15-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 SUPERFAMILY SSF52935 324 475 1.2E-34 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_3339 17bbf96e8093c0b057d408cf8f8759a8 480 Pfam PF00224 Pyruvate kinase, barrel domain 3 338 1.8E-122 T 15-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 THII_0387 4cf462b62bb7408c58f1f25fec9ccc1e 104 Pfam PF01724 Domain of unknown function DUF29 7 98 1.6E-27 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0387 4cf462b62bb7408c58f1f25fec9ccc1e 104 Gene3D G3DSA:1.20.1220.20 2 104 1.0E-16 T 15-10-2018 THII_2874 a0bf87999562503dfb304d83e7c492ac 833 SUPERFAMILY SSF51126 532 678 2.35E-7 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_2874 a0bf87999562503dfb304d83e7c492ac 833 SMART SM00912 32 139 1.3E-14 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_2874 a0bf87999562503dfb304d83e7c492ac 833 SUPERFAMILY SSF51126 48 303 4.08E-35 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_2874 a0bf87999562503dfb304d83e7c492ac 833 SUPERFAMILY SSF51126 340 468 1.88E-8 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_2874 a0bf87999562503dfb304d83e7c492ac 833 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 56 134 6.4E-22 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_2874 a0bf87999562503dfb304d83e7c492ac 833 Pfam PF05860 haemagglutination activity domain 49 136 1.9E-24 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_2874 a0bf87999562503dfb304d83e7c492ac 833 Gene3D G3DSA:2.160.20.10 42 333 6.6E-51 T 15-10-2018 IPR012334 Pectin lyase fold THII_2874 a0bf87999562503dfb304d83e7c492ac 833 Gene3D G3DSA:2.160.20.10 596 777 2.6E-11 T 15-10-2018 IPR012334 Pectin lyase fold THII_2349 42eee1dfa6e431643c906f1348de5137 136 Gene3D G3DSA:2.60.120.460 2 136 3.1E-40 T 15-10-2018 IPR035917 YjbQ-like superfamily THII_2349 42eee1dfa6e431643c906f1348de5137 136 PIRSF PIRSF004681 1 136 5.6E-36 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 THII_2349 42eee1dfa6e431643c906f1348de5137 136 Pfam PF01894 Uncharacterised protein family UPF0047 19 132 9.5E-35 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 THII_2349 42eee1dfa6e431643c906f1348de5137 136 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 7 134 2.5E-40 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 THII_2349 42eee1dfa6e431643c906f1348de5137 136 SUPERFAMILY SSF111038 1 135 1.7E-39 T 15-10-2018 IPR035917 YjbQ-like superfamily THII_0476 fcb56838f6b70f20ade3a195217d860e 165 Gene3D G3DSA:3.90.1570.10 11 165 4.0E-19 T 15-10-2018 THII_0476 fcb56838f6b70f20ade3a195217d860e 165 Pfam PF05685 Putative restriction endonuclease 18 141 3.5E-13 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0476 fcb56838f6b70f20ade3a195217d860e 165 SUPERFAMILY SSF52980 18 164 3.43E-16 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1151 3a68c41e6d070731fbe81e11f736fa22 481 Gene3D G3DSA:1.25.60.10 35 161 7.7E-18 T 15-10-2018 IPR038076 MgtE, N-terminal domain superfamily THII_1151 3a68c41e6d070731fbe81e11f736fa22 481 SUPERFAMILY SSF158791 42 163 1.96E-25 T 15-10-2018 THII_1151 3a68c41e6d070731fbe81e11f736fa22 481 SUPERFAMILY SSF54631 165 305 4.45E-24 T 15-10-2018 THII_1151 3a68c41e6d070731fbe81e11f736fa22 481 SUPERFAMILY SSF161093 307 478 2.48E-48 T 15-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 THII_1151 3a68c41e6d070731fbe81e11f736fa22 481 TIGRFAM TIGR00400 mgtE: magnesium transporter 44 478 1.8E-87 T 15-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 THII_1151 3a68c41e6d070731fbe81e11f736fa22 481 Gene3D G3DSA:3.10.580.10 162 289 6.3E-32 T 15-10-2018 THII_1151 3a68c41e6d070731fbe81e11f736fa22 481 Pfam PF00571 CBS domain 230 283 0.0039 T 15-10-2018 IPR000644 CBS domain THII_1151 3a68c41e6d070731fbe81e11f736fa22 481 Pfam PF03448 MgtE intracellular N domain 63 164 3.1E-23 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain THII_1151 3a68c41e6d070731fbe81e11f736fa22 481 Pfam PF01769 Divalent cation transporter 350 471 3.0E-26 T 15-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 THII_1151 3a68c41e6d070731fbe81e11f736fa22 481 SMART SM00924 63 166 7.9E-32 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain THII_1151 3a68c41e6d070731fbe81e11f736fa22 481 Gene3D G3DSA:1.10.357.20 305 478 2.4E-47 T 15-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain THII_3296 c74d9896a229a02d111431c22219826a 177 SUPERFAMILY SSF46689 23 142 5.5E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_3296 c74d9896a229a02d111431c22219826a 177 Pfam PF13518 Helix-turn-helix domain 29 78 8.3E-11 T 15-10-2018 THII_3197 cd1073326818f1ab7bd60ff2841e2496 155 Pfam PF01814 Hemerythrin HHE cation binding domain 14 130 5.4E-13 T 15-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 THII_3197 cd1073326818f1ab7bd60ff2841e2496 155 SUPERFAMILY SSF47188 3 130 7.06E-35 T 15-10-2018 IPR035938 Hemerythrin-like superfamily THII_3197 cd1073326818f1ab7bd60ff2841e2496 155 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 130 8.7E-40 T 15-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 THII_3197 cd1073326818f1ab7bd60ff2841e2496 155 Gene3D G3DSA:1.20.120.50 1 136 1.8E-42 T 15-10-2018 IPR035938 Hemerythrin-like superfamily THII_3197 cd1073326818f1ab7bd60ff2841e2496 155 ProSitePatterns PS00550 Hemerythrin family signature. 59 82 - T 15-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 THII_3196 d245aeef06014d56830ce2e33176d2c6 452 SMART SM00729 196 405 3.4E-22 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_3196 d245aeef06014d56830ce2e33176d2c6 452 Pfam PF04055 Radical SAM superfamily 202 364 1.1E-13 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_3196 d245aeef06014d56830ce2e33176d2c6 452 SUPERFAMILY SSF102114 198 429 1.57E-33 T 15-10-2018 THII_3196 d245aeef06014d56830ce2e33176d2c6 452 Gene3D G3DSA:3.80.30.20 196 410 4.8E-22 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe THII_0307 62672c4cf2c01841a77f227a97cb90c1 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.479 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0307 62672c4cf2c01841a77f227a97cb90c1 110 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 8.9E-37 T 15-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 THII_0307 62672c4cf2c01841a77f227a97cb90c1 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 15-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0307 62672c4cf2c01841a77f227a97cb90c1 110 Gene3D G3DSA:3.90.470.10 1 110 5.6E-46 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 THII_0307 62672c4cf2c01841a77f227a97cb90c1 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 6 107 8.2E-45 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0307 62672c4cf2c01841a77f227a97cb90c1 110 SUPERFAMILY SSF54843 2 109 1.16E-41 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 THII_2533 8d98c965bbc059dfabd06df6ade7b1e0 483 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 17 464 2.2E-165 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2533 8d98c965bbc059dfabd06df6ade7b1e0 483 Gene3D G3DSA:3.40.50.720 16 102 2.9E-31 T 15-10-2018 THII_2533 8d98c965bbc059dfabd06df6ade7b1e0 483 SUPERFAMILY SSF53623 101 318 1.7E-71 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_2533 8d98c965bbc059dfabd06df6ade7b1e0 483 SUPERFAMILY SSF51984 16 102 1.96E-29 T 15-10-2018 THII_2533 8d98c965bbc059dfabd06df6ade7b1e0 483 Pfam PF08245 Mur ligase middle domain 120 300 1.5E-30 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 THII_2533 8d98c965bbc059dfabd06df6ade7b1e0 483 Gene3D G3DSA:3.40.1190.10 104 316 1.4E-80 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 THII_2533 8d98c965bbc059dfabd06df6ade7b1e0 483 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 471 42.214 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 THII_2533 8d98c965bbc059dfabd06df6ade7b1e0 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 405 3.1E-20 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 THII_2533 8d98c965bbc059dfabd06df6ade7b1e0 483 Pfam PF01225 Mur ligase family, catalytic domain 17 114 3.9E-26 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 THII_2533 8d98c965bbc059dfabd06df6ade7b1e0 483 SUPERFAMILY SSF53244 319 468 1.35E-42 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_2533 8d98c965bbc059dfabd06df6ade7b1e0 483 Gene3D G3DSA:3.90.190.20 317 478 1.4E-44 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 THII_1089 6d55802fd60595dbf4eff95d0cba6823 152 Gene3D G3DSA:1.20.1220.20 7 152 7.2E-30 T 15-10-2018 THII_1089 6d55802fd60595dbf4eff95d0cba6823 152 Pfam PF01724 Domain of unknown function DUF29 14 149 1.9E-47 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_3909 6c0bd900d43ab96fb90437d7041433a6 574 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 279 305 4.5E-6 T 15-10-2018 THII_3909 6c0bd900d43ab96fb90437d7041433a6 574 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 238 264 2.3E-6 T 15-10-2018 THII_3909 6c0bd900d43ab96fb90437d7041433a6 574 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 198 226 2.5E-8 T 15-10-2018 THII_3909 6c0bd900d43ab96fb90437d7041433a6 574 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 159 187 2.1E-10 T 15-10-2018 THII_3909 6c0bd900d43ab96fb90437d7041433a6 574 SUPERFAMILY SSF50985 70 306 1.57E-42 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_3909 6c0bd900d43ab96fb90437d7041433a6 574 Gene3D G3DSA:2.130.10.30 100 335 3.7E-50 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_2351 30f8357ad246ff68df9d2e7d23fd4ddd 171 SUPERFAMILY SSF50630 55 158 1.76E-17 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily THII_2351 30f8357ad246ff68df9d2e7d23fd4ddd 171 Gene3D G3DSA:2.40.70.10 46 171 2.3E-29 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily THII_2351 30f8357ad246ff68df9d2e7d23fd4ddd 171 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 54 169 1.6E-29 T 15-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal THII_2351 30f8357ad246ff68df9d2e7d23fd4ddd 171 Pfam PF13975 gag-polyprotein putative aspartyl protease 67 155 7.3E-23 T 15-10-2018 THII_3836 214c3aee9a93b3aed37751900feecf57 174 SUPERFAMILY SSF47240 1 160 4.06E-54 T 15-10-2018 IPR009078 Ferritin-like superfamily THII_3836 214c3aee9a93b3aed37751900feecf57 174 Pfam PF00210 Ferritin-like domain 8 144 6.2E-38 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 THII_3836 214c3aee9a93b3aed37751900feecf57 174 Gene3D G3DSA:1.20.1260.10 2 173 1.1E-48 T 15-10-2018 IPR012347 Ferritin-like THII_3519 2a901732fe23d05677910499d57143a7 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 3.3E-27 T 15-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 THII_3519 2a901732fe23d05677910499d57143a7 95 SUPERFAMILY SSF141000 3 93 2.62E-27 T 15-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 THII_3519 2a901732fe23d05677910499d57143a7 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.87 T 15-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 THII_3519 2a901732fe23d05677910499d57143a7 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 8.8E-16 T 15-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 THII_3519 2a901732fe23d05677910499d57143a7 95 Gene3D G3DSA:1.10.20.60 1 93 1.1E-23 T 15-10-2018 THII_3395 31c2c476ce40f6b87959eae901f17bc0 340 Gene3D G3DSA:1.20.81.30 193 308 4.9E-22 T 15-10-2018 THII_3395 31c2c476ce40f6b87959eae901f17bc0 340 Gene3D G3DSA:1.20.81.30 10 119 5.8E-16 T 15-10-2018 THII_3395 31c2c476ce40f6b87959eae901f17bc0 340 Pfam PF00482 Type II secretion system (T2SS), protein F 210 327 2.1E-17 T 15-10-2018 IPR018076 Type II secretion system F domain THII_3395 31c2c476ce40f6b87959eae901f17bc0 340 Pfam PF00482 Type II secretion system (T2SS), protein F 26 133 2.7E-14 T 15-10-2018 IPR018076 Type II secretion system F domain THII_0949 da539c9174c408a91a50b7950c7dbdc6 458 SMART SM00729 140 365 5.0E-46 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_0949 da539c9174c408a91a50b7950c7dbdc6 458 Gene3D G3DSA:3.80.30.20 138 379 4.7E-67 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe THII_0949 da539c9174c408a91a50b7950c7dbdc6 458 Pfam PF04055 Radical SAM superfamily 146 323 1.6E-24 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_0949 da539c9174c408a91a50b7950c7dbdc6 458 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 10 438 3.5E-161 T 15-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 THII_0949 da539c9174c408a91a50b7950c7dbdc6 458 Gene3D G3DSA:2.40.50.140 380 452 1.5E-14 T 15-10-2018 THII_0949 da539c9174c408a91a50b7950c7dbdc6 458 SUPERFAMILY SSF102114 127 370 4.84E-46 T 15-10-2018 THII_0949 da539c9174c408a91a50b7950c7dbdc6 458 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 9 441 57.127 T 15-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 THII_0949 da539c9174c408a91a50b7950c7dbdc6 458 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 10 439 4.4E-99 T 15-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 THII_0949 da539c9174c408a91a50b7950c7dbdc6 458 Gene3D G3DSA:3.40.50.12160 9 125 4.7E-27 T 15-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily THII_0949 da539c9174c408a91a50b7950c7dbdc6 458 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 15-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 THII_0949 da539c9174c408a91a50b7950c7dbdc6 458 Pfam PF00919 Uncharacterized protein family UPF0004 10 102 3.5E-19 T 15-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 THII_1083 9a5167703752201d410bbe7587ce6b4a 98 Gene3D G3DSA:3.30.460.10 1 98 7.1E-21 T 15-10-2018 THII_1083 9a5167703752201d410bbe7587ce6b4a 98 SUPERFAMILY SSF81301 6 95 5.18E-13 T 15-10-2018 THII_1083 9a5167703752201d410bbe7587ce6b4a 98 Pfam PF01909 Nucleotidyltransferase domain 10 83 1.3E-5 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 THII_2978 5aee84e0e69537702945beb82740f515 330 SUPERFAMILY SSF53448 4 323 6.38E-37 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2978 5aee84e0e69537702945beb82740f515 330 Gene3D G3DSA:3.90.550.10 1 259 2.7E-34 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2978 5aee84e0e69537702945beb82740f515 330 Pfam PF00535 Glycosyl transferase family 2 12 160 7.2E-9 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_3223 008460c3cbce942b04be6ad6e6bff3e0 151 Gene3D G3DSA:2.40.50.100 72 151 3.6E-31 T 15-10-2018 THII_3223 008460c3cbce942b04be6ad6e6bff3e0 151 SUPERFAMILY SSF51230 76 151 3.8E-25 T 15-10-2018 IPR011053 Single hybrid motif THII_3223 008460c3cbce942b04be6ad6e6bff3e0 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 3.6E-16 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 THII_3223 008460c3cbce942b04be6ad6e6bff3e0 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 3.6E-16 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 THII_3223 008460c3cbce942b04be6ad6e6bff3e0 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 3.6E-16 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 THII_3223 008460c3cbce942b04be6ad6e6bff3e0 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 151 7.4E-52 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 THII_3223 008460c3cbce942b04be6ad6e6bff3e0 151 Pfam PF00364 Biotin-requiring enzyme 78 150 2.4E-23 T 15-10-2018 IPR000089 Biotin/lipoyl attachment THII_1685 b869bb4b93993384ffaaf13d04c6bee2 269 Pfam PF01578 Cytochrome C assembly protein 39 265 4.8E-32 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 Gene3D G3DSA:3.40.50.12740 418 535 6.1E-48 T 15-10-2018 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 366 1.4E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 327 1.4E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 385 1.4E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 341 1.4E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 Gene3D G3DSA:1.10.287.130 146 228 7.2E-26 T 15-10-2018 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 275 385 9.8E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 Gene3D G3DSA:3.30.565.10 229 392 6.7E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 SMART SM00387 274 388 1.1E-38 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 SUPERFAMILY SSF52172 3 127 2.28E-37 T 15-10-2018 IPR011006 CheY-like superfamily THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 SMART SM00448 417 530 4.7E-42 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 SMART SM00448 1 106 9.6E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 SUPERFAMILY SSF47384 145 229 3.34E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 Gene3D G3DSA:3.40.50.2300 1 145 2.4E-36 T 15-10-2018 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 SUPERFAMILY SSF52172 410 534 1.71E-41 T 15-10-2018 IPR011006 CheY-like superfamily THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 SUPERFAMILY SSF55874 217 387 5.76E-47 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 SMART SM00388 160 228 2.2E-25 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 Pfam PF00512 His Kinase A (phospho-acceptor) domain 161 228 2.0E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 Pfam PF00072 Response regulator receiver domain 419 530 2.1E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3448 9640721d2ad1f1b036d2882a0e60439e 535 Pfam PF00072 Response regulator receiver domain 2 106 2.2E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1761 94d768b32948968bf45ee52cd5565253 264 Gene3D G3DSA:1.10.8.1040 30 85 1.5E-7 T 15-10-2018 THII_1761 94d768b32948968bf45ee52cd5565253 264 Gene3D G3DSA:3.10.50.40 129 226 8.8E-26 T 15-10-2018 THII_1761 94d768b32948968bf45ee52cd5565253 264 SUPERFAMILY SSF54534 132 223 3.47E-23 T 15-10-2018 THII_1761 94d768b32948968bf45ee52cd5565253 264 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 159 180 - T 15-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 THII_1761 94d768b32948968bf45ee52cd5565253 264 SUPERFAMILY SSF109998 30 160 3.33E-12 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily THII_1761 94d768b32948968bf45ee52cd5565253 264 Pfam PF00639 PPIC-type PPIASE domain 142 220 6.4E-17 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 THII_1703 395572db1ac9010591b10b00aca27108 446 Pfam PF01943 Polysaccharide biosynthesis protein 12 292 5.0E-14 T 15-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 THII_3788 de8ee0e62bb4674d78a05ef35673b574 294 Gene3D G3DSA:1.25.40.10 2 105 8.9E-19 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3788 de8ee0e62bb4674d78a05ef35673b574 294 SUPERFAMILY SSF48439 12 220 7.59E-31 T 15-10-2018 THII_3788 de8ee0e62bb4674d78a05ef35673b574 294 SMART SM00028 126 159 0.04 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3788 de8ee0e62bb4674d78a05ef35673b574 294 SMART SM00028 56 89 0.0049 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3788 de8ee0e62bb4674d78a05ef35673b574 294 SMART SM00028 235 268 200.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3788 de8ee0e62bb4674d78a05ef35673b574 294 SMART SM00028 22 55 0.031 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3788 de8ee0e62bb4674d78a05ef35673b574 294 SMART SM00028 90 125 1.1 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3788 de8ee0e62bb4674d78a05ef35673b574 294 SMART SM00028 161 194 3.5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_3788 de8ee0e62bb4674d78a05ef35673b574 294 Gene3D G3DSA:1.25.40.10 106 288 6.4E-26 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3788 de8ee0e62bb4674d78a05ef35673b574 294 Pfam PF07719 Tetratricopeptide repeat 164 192 2.8E-5 T 15-10-2018 IPR013105 Tetratricopeptide repeat 2 THII_3788 de8ee0e62bb4674d78a05ef35673b574 294 Pfam PF13432 Tetratricopeptide repeat 27 84 1.6E-5 T 15-10-2018 THII_1442 0e93b1bee8b97a5342caccc49080bcd6 565 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 9 564 8.6E-97 T 15-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 THII_1442 0e93b1bee8b97a5342caccc49080bcd6 565 SUPERFAMILY SSF51445 10 564 5.35E-153 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily THII_1442 0e93b1bee8b97a5342caccc49080bcd6 565 Pfam PF02446 4-alpha-glucanotransferase 17 543 1.9E-145 T 15-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 THII_1442 0e93b1bee8b97a5342caccc49080bcd6 565 Gene3D G3DSA:3.20.20.80 8 115 1.8E-27 T 15-10-2018 THII_1442 0e93b1bee8b97a5342caccc49080bcd6 565 Gene3D G3DSA:3.20.20.80 119 565 1.0E-139 T 15-10-2018 THII_3589 82da3f700d64baaa12ca1b40a11ded1e 59 Pfam PF01783 Ribosomal L32p protein family 2 54 1.7E-18 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3589 82da3f700d64baaa12ca1b40a11ded1e 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 4.9E-18 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3589 82da3f700d64baaa12ca1b40a11ded1e 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 15.702 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_3589 82da3f700d64baaa12ca1b40a11ded1e 59 SUPERFAMILY SSF57829 2 54 5.92E-17 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 THII_3625 0385a42e3de0eac56ee87c8e5fb05f98 618 Gene3D G3DSA:3.30.70.1450 337 412 7.0E-15 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 THII_3625 0385a42e3de0eac56ee87c8e5fb05f98 618 Gene3D G3DSA:3.30.70.1450 244 319 1.3E-9 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 THII_3625 0385a42e3de0eac56ee87c8e5fb05f98 618 SUPERFAMILY SSF116726 329 412 2.22E-17 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 THII_3625 0385a42e3de0eac56ee87c8e5fb05f98 618 Pfam PF02080 TrkA-C domain 340 408 4.2E-11 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 THII_3625 0385a42e3de0eac56ee87c8e5fb05f98 618 Pfam PF02080 TrkA-C domain 248 318 1.5E-7 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 THII_3625 0385a42e3de0eac56ee87c8e5fb05f98 618 Pfam PF03600 Citrate transporter 27 566 4.7E-50 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 THII_3625 0385a42e3de0eac56ee87c8e5fb05f98 618 SUPERFAMILY SSF116726 242 322 4.45E-12 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 THII_2980 46e857e8f373b04b6806145b4d6171b7 238 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 10 230 32.945 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 THII_2980 46e857e8f373b04b6806145b4d6171b7 238 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 7 231 2.7E-81 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 THII_2980 46e857e8f373b04b6806145b4d6171b7 238 SUPERFAMILY SSF51419 7 229 1.57E-78 T 15-10-2018 IPR029066 PLP-binding barrel THII_2980 46e857e8f373b04b6806145b4d6171b7 238 Pfam PF01168 Alanine racemase, N-terminal domain 32 231 4.6E-30 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_2980 46e857e8f373b04b6806145b4d6171b7 238 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 THII_2980 46e857e8f373b04b6806145b4d6171b7 238 PIRSF PIRSF004848 5 236 2.4E-75 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 THII_2980 46e857e8f373b04b6806145b4d6171b7 238 Gene3D G3DSA:3.20.20.10 2 237 2.1E-82 T 15-10-2018 IPR029066 PLP-binding barrel THII_1970 d32a55f1676dfa11c5dd146df7af7683 270 SUPERFAMILY SSF52540 27 234 5.25E-33 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1970 d32a55f1676dfa11c5dd146df7af7683 270 Pfam PF07728 AAA domain (dynein-related subfamily) 38 172 9.8E-32 T 15-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 THII_1970 d32a55f1676dfa11c5dd146df7af7683 270 Gene3D G3DSA:3.40.50.300 23 190 1.5E-29 T 15-10-2018 THII_1970 d32a55f1676dfa11c5dd146df7af7683 270 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 185 265 3.4E-28 T 15-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal THII_1702 ca41d354ab64eaca495aaab6b3fe0cf5 350 SUPERFAMILY SSF53448 5 147 6.84E-18 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1702 ca41d354ab64eaca495aaab6b3fe0cf5 350 Gene3D G3DSA:3.90.550.10 2 191 1.9E-14 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1702 ca41d354ab64eaca495aaab6b3fe0cf5 350 Pfam PF00535 Glycosyl transferase family 2 8 114 3.9E-15 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_1168 abf86248a2cbbed358c3bce25a1d49ca 665 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 648 665 - T 15-10-2018 IPR010917 TonB-dependent receptor, conserved site THII_1168 abf86248a2cbbed358c3bce25a1d49ca 665 Gene3D G3DSA:2.170.130.10 48 160 2.8E-20 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily THII_1168 abf86248a2cbbed358c3bce25a1d49ca 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 150 4.7E-17 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain THII_1168 abf86248a2cbbed358c3bce25a1d49ca 665 Pfam PF00593 TonB dependent receptor 224 663 1.9E-33 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel THII_1168 abf86248a2cbbed358c3bce25a1d49ca 665 Gene3D G3DSA:2.40.170.20 161 665 4.5E-61 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily THII_1168 abf86248a2cbbed358c3bce25a1d49ca 665 SUPERFAMILY SSF56935 50 665 3.36E-89 T 15-10-2018 THII_2361 5c913e055bab69b9302c46983c988b87 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 3.3E-33 T 15-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 THII_2361 5c913e055bab69b9302c46983c988b87 106 Gene3D G3DSA:3.30.1390.10 1 106 3.2E-44 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like THII_2361 5c913e055bab69b9302c46983c988b87 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 6 101 28.726 T 15-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS THII_2361 5c913e055bab69b9302c46983c988b87 106 SUPERFAMILY SSF54736 21 105 1.26E-31 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like THII_2951 be20990b495062e64e63c75e49a1658c 230 Gene3D G3DSA:2.20.110.10 27 96 2.6E-6 T 15-10-2018 THII_2951 be20990b495062e64e63c75e49a1658c 230 Gene3D G3DSA:3.90.930.1 97 219 1.9E-18 T 15-10-2018 THII_2951 be20990b495062e64e63c75e49a1658c 230 SUPERFAMILY SSF82185 30 132 1.22E-14 T 15-10-2018 THII_2951 be20990b495062e64e63c75e49a1658c 230 SUPERFAMILY SSF82185 113 214 3.01E-14 T 15-10-2018 THII_2951 be20990b495062e64e63c75e49a1658c 230 Pfam PF07661 MORN repeat variant 119 139 0.0016 T 15-10-2018 IPR011652 MORN variant THII_2951 be20990b495062e64e63c75e49a1658c 230 Pfam PF07661 MORN repeat variant 143 163 0.051 T 15-10-2018 IPR011652 MORN variant THII_2951 be20990b495062e64e63c75e49a1658c 230 Pfam PF07661 MORN repeat variant 48 69 8.8E-4 T 15-10-2018 IPR011652 MORN variant THII_2951 be20990b495062e64e63c75e49a1658c 230 Pfam PF07661 MORN repeat variant 192 213 0.026 T 15-10-2018 IPR011652 MORN variant THII_1255 84ff62d82863a41452713aec9409df63 241 Gene3D G3DSA:3.40.50.300 2 241 3.5E-70 T 15-10-2018 THII_1255 84ff62d82863a41452713aec9409df63 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_1255 84ff62d82863a41452713aec9409df63 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 1.5E-117 T 15-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 THII_1255 84ff62d82863a41452713aec9409df63 241 SUPERFAMILY SSF52540 4 236 8.87E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1255 84ff62d82863a41452713aec9409df63 241 Pfam PF00005 ABC transporter 19 166 3.6E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_1255 84ff62d82863a41452713aec9409df63 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.4E-9 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal THII_1255 84ff62d82863a41452713aec9409df63 241 SMART SM00382 28 213 7.9E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3262 c870f3518df37bab08b358d36ba213c0 228 SUPERFAMILY SSF54862 36 204 2.09E-53 T 15-10-2018 THII_3262 c870f3518df37bab08b358d36ba213c0 228 Pfam PF12800 4Fe-4S binding domain 46 58 0.012 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_3262 c870f3518df37bab08b358d36ba213c0 228 Pfam PF13247 4Fe-4S dicluster domain 88 178 4.3E-22 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_3262 c870f3518df37bab08b358d36ba213c0 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 124 135 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_3262 c870f3518df37bab08b358d36ba213c0 228 Gene3D G3DSA:3.30.70.20 28 226 5.1E-47 T 15-10-2018 THII_1154 b6d832934aaf3a973a80d0545005f515 363 Pfam PF01266 FAD dependent oxidoreductase 3 343 4.5E-67 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 THII_1154 b6d832934aaf3a973a80d0545005f515 363 Gene3D G3DSA:3.30.9.10 89 303 2.2E-85 T 15-10-2018 THII_1154 b6d832934aaf3a973a80d0545005f515 363 Gene3D G3DSA:3.50.50.60 3 344 2.2E-85 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1154 b6d832934aaf3a973a80d0545005f515 363 SUPERFAMILY SSF54373 217 304 2.09E-17 T 15-10-2018 THII_1154 b6d832934aaf3a973a80d0545005f515 363 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 5 346 4.4E-83 T 15-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 THII_1154 b6d832934aaf3a973a80d0545005f515 363 SUPERFAMILY SSF51905 1 358 1.2E-44 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_3509 52212d581761e58ba06387225bc8d838 99 Pfam PF04359 Protein of unknown function (DUF493) 17 98 4.8E-29 T 15-10-2018 IPR007454 Uncharacterised protein family UPF0250 THII_3509 52212d581761e58ba06387225bc8d838 99 ProDom PD061650 JHP0447 HP0495 CJ0253 20 99 4.0E-5 T 15-10-2018 THII_3509 52212d581761e58ba06387225bc8d838 99 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 11 99 20.188 T 15-10-2018 IPR007454 Uncharacterised protein family UPF0250 THII_3509 52212d581761e58ba06387225bc8d838 99 Gene3D G3DSA:3.30.70.260 13 99 1.4E-28 T 15-10-2018 THII_3509 52212d581761e58ba06387225bc8d838 99 SUPERFAMILY SSF117991 15 98 1.7E-22 T 15-10-2018 IPR027471 YbeD-like domain superfamily THII_3402 7a122e90af7be61ed13ad1f878991b48 250 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.3E-76 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3402 7a122e90af7be61ed13ad1f878991b48 250 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 15-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3402 7a122e90af7be61ed13ad1f878991b48 250 Pfam PF00121 Triosephosphate isomerase 5 246 9.1E-94 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3402 7a122e90af7be61ed13ad1f878991b48 250 SUPERFAMILY SSF51351 1 248 2.36E-95 T 15-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_3402 7a122e90af7be61ed13ad1f878991b48 250 Gene3D G3DSA:3.20.20.70 1 250 7.6E-102 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3402 7a122e90af7be61ed13ad1f878991b48 250 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 61.658 T 15-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_1156 cf2109fdc736eac01f4a31105710b2e5 119 Gene3D G3DSA:3.40.50.10140 6 83 8.3E-9 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_1156 cf2109fdc736eac01f4a31105710b2e5 119 Pfam PF08357 SEFIR domain 8 86 5.5E-12 T 15-10-2018 IPR013568 SEFIR domain THII_1156 cf2109fdc736eac01f4a31105710b2e5 119 SUPERFAMILY SSF52200 7 73 1.44E-5 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_1147 4752341d84a15a1dab42970f79a3f8c8 339 Pfam PF12323 Helix-turn-helix domain 1 43 1.6E-12 T 15-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain THII_1147 4752341d84a15a1dab42970f79a3f8c8 339 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 248 319 4.8E-12 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal THII_1147 4752341d84a15a1dab42970f79a3f8c8 339 Pfam PF07282 Putative transposase DNA-binding domain 292 337 5.2E-12 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal THII_1147 4752341d84a15a1dab42970f79a3f8c8 339 Pfam PF01385 Probable transposase 165 278 1.2E-26 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 THII_2771 fb3aca9ab5f6e0435f12703e8c7bac81 543 SMART SM00382 356 533 4.9E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2771 fb3aca9ab5f6e0435f12703e8c7bac81 543 Gene3D G3DSA:3.40.50.300 329 542 5.6E-32 T 15-10-2018 THII_2771 fb3aca9ab5f6e0435f12703e8c7bac81 543 SUPERFAMILY SSF90123 19 302 8.76E-7 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 THII_2771 fb3aca9ab5f6e0435f12703e8c7bac81 543 SUPERFAMILY SSF52540 331 540 5.24E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2771 fb3aca9ab5f6e0435f12703e8c7bac81 543 Pfam PF00005 ABC transporter 348 483 5.7E-17 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2369 15de5c29fbcc288d7a8d2cbd54167a0d 65 Gene3D G3DSA:2.40.50.530 1 65 2.4E-22 T 15-10-2018 THII_2369 15de5c29fbcc288d7a8d2cbd54167a0d 65 SUPERFAMILY SSF143034 2 64 1.02E-23 T 15-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2369 15de5c29fbcc288d7a8d2cbd54167a0d 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.0E-19 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 THII_2369 15de5c29fbcc288d7a8d2cbd54167a0d 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.0E-19 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 THII_2369 15de5c29fbcc288d7a8d2cbd54167a0d 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.0E-19 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 THII_2369 15de5c29fbcc288d7a8d2cbd54167a0d 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 15-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_2369 15de5c29fbcc288d7a8d2cbd54167a0d 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.686 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 THII_2369 15de5c29fbcc288d7a8d2cbd54167a0d 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.1E-26 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 THII_2369 15de5c29fbcc288d7a8d2cbd54167a0d 65 Pfam PF01632 Ribosomal protein L35 2 62 2.1E-26 T 15-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0213 f3e6253895a061d838744e7600a50a7a 403 Pfam PF00005 ABC transporter 39 172 3.5E-16 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_0213 f3e6253895a061d838744e7600a50a7a 403 Gene3D G3DSA:3.40.50.300 2 262 6.7E-40 T 15-10-2018 THII_0213 f3e6253895a061d838744e7600a50a7a 403 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_0213 f3e6253895a061d838744e7600a50a7a 403 Pfam PF14524 Wzt C-terminal domain 265 395 3.3E-12 T 15-10-2018 IPR029439 Wzt, C-terminal THII_0213 f3e6253895a061d838744e7600a50a7a 403 SUPERFAMILY SSF52540 20 233 7.73E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0213 f3e6253895a061d838744e7600a50a7a 403 SMART SM00382 48 220 3.4E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1133 fd26a9a41f8da6305b5fd86fec82c04b 298 Gene3D G3DSA:3.90.550.10 1 296 1.7E-86 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1133 fd26a9a41f8da6305b5fd86fec82c04b 298 Pfam PF00483 Nucleotidyl transferase 15 263 8.5E-27 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 THII_1133 fd26a9a41f8da6305b5fd86fec82c04b 298 SUPERFAMILY SSF53448 8 281 4.06E-61 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1133 fd26a9a41f8da6305b5fd86fec82c04b 298 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 269 3.3E-112 T 15-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 THII_2031 4c250a25aef18a814fd0154b35edf8f8 72 SUPERFAMILY SSF141694 1 42 5.49E-5 T 15-10-2018 THII_2285 e88aa7a210af844b0457f55c0051cb22 147 Pfam PF00011 Hsp20/alpha crystallin family 46 145 1.2E-23 T 15-10-2018 IPR002068 Alpha crystallin/Hsp20 domain THII_2285 e88aa7a210af844b0457f55c0051cb22 147 SUPERFAMILY SSF49764 34 146 4.53E-37 T 15-10-2018 IPR008978 HSP20-like chaperone THII_2285 e88aa7a210af844b0457f55c0051cb22 147 Gene3D G3DSA:2.60.40.790 3 147 3.6E-36 T 15-10-2018 IPR008978 HSP20-like chaperone THII_2833 68126a629175833676a3bac40d0b5425 90 Gene3D G3DSA:3.30.2310.20 2 86 6.8E-16 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2833 68126a629175833676a3bac40d0b5425 90 SUPERFAMILY SSF143011 1 79 1.96E-16 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2833 68126a629175833676a3bac40d0b5425 90 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 8 80 4.8E-7 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family THII_3922 f79b3ffa29d8e4ab9cfb571ca9297421 336 Pfam PF00535 Glycosyl transferase family 2 9 144 4.9E-13 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_3922 f79b3ffa29d8e4ab9cfb571ca9297421 336 SUPERFAMILY SSF53448 3 235 2.49E-35 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3922 f79b3ffa29d8e4ab9cfb571ca9297421 336 Gene3D G3DSA:3.90.550.10 2 216 9.5E-30 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2100 1b76c6f787143530d1e8869a1ad31477 566 Pfam PF13401 AAA domain 42 172 4.4E-21 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2100 1b76c6f787143530d1e8869a1ad31477 566 SUPERFAMILY SSF47090 470 543 7.06E-11 T 15-10-2018 IPR036365 PGBD-like superfamily THII_2100 1b76c6f787143530d1e8869a1ad31477 566 SMART SM00382 42 196 2.7E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2100 1b76c6f787143530d1e8869a1ad31477 566 Gene3D G3DSA:1.10.101.10 471 542 1.1E-42 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 THII_2100 1b76c6f787143530d1e8869a1ad31477 566 Gene3D G3DSA:3.40.50.300 27 186 7.7E-16 T 15-10-2018 THII_2100 1b76c6f787143530d1e8869a1ad31477 566 SUPERFAMILY SSF52540 5 265 1.38E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2100 1b76c6f787143530d1e8869a1ad31477 566 Gene3D G3DSA:3.90.70.10 368 470 1.1E-42 T 15-10-2018 THII_2100 1b76c6f787143530d1e8869a1ad31477 566 Pfam PF01471 Putative peptidoglycan binding domain 506 541 7.6E-7 T 15-10-2018 IPR002477 Peptidoglycan binding-like THII_3802 a5b6f5af26f14e691823ecc8aafecb7a 121 Gene3D G3DSA:3.40.960.10 18 119 2.6E-34 T 15-10-2018 THII_3802 a5b6f5af26f14e691823ecc8aafecb7a 121 SUPERFAMILY SSF52980 13 117 1.72E-17 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3802 a5b6f5af26f14e691823ecc8aafecb7a 121 Pfam PF04480 Protein of unknown function (DUF559) 10 117 4.3E-36 T 15-10-2018 IPR007569 Protein of unknown function DUF559 THII_3847 82f84712281d40e22134953d2430f762 940 Gene3D G3DSA:3.40.50.300 585 770 5.9E-23 T 15-10-2018 THII_3847 82f84712281d40e22134953d2430f762 940 SUPERFAMILY SSF52540 578 840 2.01E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3807 9e9516ab87b7608776c0380338feceb0 121 Gene3D G3DSA:3.30.1360.20 18 114 9.3E-29 T 15-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 THII_3807 9e9516ab87b7608776c0380338feceb0 121 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 110 20.676 T 15-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 THII_3807 9e9516ab87b7608776c0380338feceb0 121 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 18 108 5.3E-27 T 15-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 THII_3807 9e9516ab87b7608776c0380338feceb0 121 SUPERFAMILY SSF55248 19 110 8.76E-27 T 15-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 THII_0682 371a2def4b670a685581487e4f106efd 307 Gene3D G3DSA:1.10.3720.10 84 299 1.1E-28 T 15-10-2018 IPR035906 MetI-like superfamily THII_0682 371a2def4b670a685581487e4f106efd 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 305 3.6E-43 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 THII_0682 371a2def4b670a685581487e4f106efd 307 SUPERFAMILY SSF161098 90 289 3.43E-23 T 15-10-2018 IPR035906 MetI-like superfamily THII_3406 4ebf320840004f09d5170df5d5bfd09d 72 Gene3D G3DSA:1.10.260.40 12 68 2.7E-12 T 15-10-2018 THII_3406 4ebf320840004f09d5170df5d5bfd09d 72 SUPERFAMILY SSF47413 13 57 8.45E-8 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_1347 f549554b09f3a7467bcb2d4a7532c3d0 350 Gene3D G3DSA:3.40.50.720 3 322 4.8E-131 T 15-10-2018 THII_1347 f549554b09f3a7467bcb2d4a7532c3d0 350 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 6.6E-98 T 15-10-2018 IPR016040 NAD(P)-binding domain THII_1347 f549554b09f3a7467bcb2d4a7532c3d0 350 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 336 3.1E-153 T 15-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 THII_1347 f549554b09f3a7467bcb2d4a7532c3d0 350 Gene3D G3DSA:3.90.25.10 200 330 4.8E-131 T 15-10-2018 THII_1347 f549554b09f3a7467bcb2d4a7532c3d0 350 SUPERFAMILY SSF51735 2 334 4.62E-91 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0876 d6707d4abf845576938099ade2a05c40 509 SUPERFAMILY SSF52096 272 445 4.25E-31 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_0876 d6707d4abf845576938099ade2a05c40 509 Gene3D G3DSA:3.90.226.10 253 446 1.8E-31 T 15-10-2018 THII_0876 d6707d4abf845576938099ade2a05c40 509 Pfam PF00574 Clp protease 272 419 7.8E-18 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA THII_1237 58529077f6f3aff7eb668cb19f1059d0 216 Gene3D G3DSA:3.30.470.30 4 198 7.1E-11 T 15-10-2018 THII_1237 58529077f6f3aff7eb668cb19f1059d0 216 SUPERFAMILY SSF56091 3 195 9.35E-15 T 15-10-2018 THII_1237 58529077f6f3aff7eb668cb19f1059d0 216 Pfam PF09414 RNA ligase 35 212 8.5E-19 T 15-10-2018 IPR021122 RNA ligase domain, REL/Rln2 THII_1488 6b130dbcceeab7ee89ec9fecbe5beaf0 482 Gene3D G3DSA:3.90.550.60 3 263 3.5E-47 T 15-10-2018 THII_1488 6b130dbcceeab7ee89ec9fecbe5beaf0 482 SUPERFAMILY SSF53448 19 306 1.13E-43 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1488 6b130dbcceeab7ee89ec9fecbe5beaf0 482 Pfam PF13641 Glycosyltransferase like family 2 17 261 1.9E-23 T 15-10-2018 THII_0156 015e332327d929ecd3c89ab7a0ec1963 121 Gene3D G3DSA:1.10.1660.10 14 89 3.9E-22 T 15-10-2018 THII_0156 015e332327d929ecd3c89ab7a0ec1963 121 SMART SM00422 19 89 3.6E-8 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 THII_0156 015e332327d929ecd3c89ab7a0ec1963 121 SUPERFAMILY SSF46955 17 117 6.87E-19 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily THII_0156 015e332327d929ecd3c89ab7a0ec1963 121 Pfam PF13411 MerR HTH family regulatory protein 19 86 1.5E-22 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 THII_0518 f1e997461a24cb9cf5e30db8f177fb6c 159 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0518 f1e997461a24cb9cf5e30db8f177fb6c 159 SUPERFAMILY SSF56770 10 155 1.57E-66 T 15-10-2018 THII_0518 f1e997461a24cb9cf5e30db8f177fb6c 159 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.092 T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0518 f1e997461a24cb9cf5e30db8f177fb6c 159 Gene3D G3DSA:3.40.50.12280 2 159 2.2E-79 T 15-10-2018 THII_0518 f1e997461a24cb9cf5e30db8f177fb6c 159 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 1.6E-22 T 15-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0518 f1e997461a24cb9cf5e30db8f177fb6c 159 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 1.6E-77 T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1967 c3b8b1fd8246cebb9a7f28745563b04d 502 Pfam PF09822 ABC-type uncharacterized transport system 40 262 3.0E-37 T 15-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 THII_1967 c3b8b1fd8246cebb9a7f28745563b04d 502 SUPERFAMILY SSF52317 149 315 2.75E-9 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_2735 11653da3b3db663fbc2125e86fc8cfba 308 Gene3D G3DSA:3.40.50.300 1 232 1.2E-67 T 15-10-2018 THII_2735 11653da3b3db663fbc2125e86fc8cfba 308 SUPERFAMILY SSF52540 5 231 2.15E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2735 11653da3b3db663fbc2125e86fc8cfba 308 SMART SM00382 31 210 2.5E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2735 11653da3b3db663fbc2125e86fc8cfba 308 Pfam PF00005 ABC transporter 23 164 6.9E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_2735 11653da3b3db663fbc2125e86fc8cfba 308 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_3432 ec76ac1f97fded83e617c2e280bf1701 204 Gene3D G3DSA:3.30.70.1070 122 201 7.4E-8 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 THII_3432 ec76ac1f97fded83e617c2e280bf1701 204 Pfam PF05036 Sporulation related domain 128 200 6.0E-12 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 THII_3432 ec76ac1f97fded83e617c2e280bf1701 204 SUPERFAMILY SSF110997 127 200 8.63E-11 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 THII_3150 ebc22256a4fab647e6c5ddb510da849b 487 SMART SM01080 43 428 5.4E-4 T 15-10-2018 IPR007890 CHASE2 THII_3150 ebc22256a4fab647e6c5ddb510da849b 487 Pfam PF05226 CHASE2 domain 33 425 6.4E-20 T 15-10-2018 IPR007890 CHASE2 THII_1542 2fc4110e8927bbf3289d992503d4bc9e 535 Pfam PF00474 Sodium:solute symporter family 17 391 1.3E-27 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 THII_1542 2fc4110e8927bbf3289d992503d4bc9e 535 Gene3D G3DSA:1.20.1730.10 1 454 1.8E-80 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily THII_3022 adad6e1293de6f40b3a3a6d6fd4a12f5 364 Gene3D G3DSA:3.20.20.70 2 363 5.3E-136 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3022 adad6e1293de6f40b3a3a6d6fd4a12f5 364 SUPERFAMILY SSF51395 2 362 1.41E-118 T 15-10-2018 THII_3022 adad6e1293de6f40b3a3a6d6fd4a12f5 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 341 1.8E-86 T 15-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 THII_2973 f155608a47bc34fe9e4057c74cbacdd7 288 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 61 223 2.7E-29 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain THII_2973 f155608a47bc34fe9e4057c74cbacdd7 288 SUPERFAMILY SSF52540 35 245 7.06E-33 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2973 f155608a47bc34fe9e4057c74cbacdd7 288 PIRSF PIRSF005624 26 258 2.0E-92 T 15-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 THII_2973 f155608a47bc34fe9e4057c74cbacdd7 288 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 33 244 4.9E-83 T 15-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 THII_2973 f155608a47bc34fe9e4057c74cbacdd7 288 Gene3D G3DSA:3.40.50.300 41 253 2.8E-61 T 15-10-2018 THII_2737 31429ad68dbc5257464883ac7f7f9bd4 775 SUPERFAMILY SSF53300 294 474 8.73E-10 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_2737 31429ad68dbc5257464883ac7f7f9bd4 775 Gene3D G3DSA:3.40.50.410 289 492 1.3E-7 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_2797 5cdc66bfec1dffc0b636ab32e002c81f 193 Pfam PF01947 Protein of unknown function (DUF98) 36 185 7.5E-16 T 15-10-2018 IPR002800 Chorismate pyruvate-lyase Rv2949c-like THII_2797 5cdc66bfec1dffc0b636ab32e002c81f 193 SUPERFAMILY SSF64288 28 187 5.65E-35 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily THII_2797 5cdc66bfec1dffc0b636ab32e002c81f 193 Gene3D G3DSA:3.40.1410.10 27 191 1.5E-40 T 15-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily THII_2524 2c68a12228e477e8fd0d1e17f3c1f134 593 Gene3D G3DSA:3.40.50.300 297 573 3.0E-20 T 15-10-2018 THII_2524 2c68a12228e477e8fd0d1e17f3c1f134 593 SUPERFAMILY SSF52540 317 581 6.49E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2524 2c68a12228e477e8fd0d1e17f3c1f134 593 Pfam PF13469 Sulfotransferase family 315 535 2.9E-16 T 15-10-2018 THII_2524 2c68a12228e477e8fd0d1e17f3c1f134 593 SUPERFAMILY SSF53448 14 254 9.84E-9 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2302 ddda208ac9a2ed4fc07b4dd4b4656dab 341 Pfam PF05685 Putative restriction endonuclease 54 203 1.3E-13 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2302 ddda208ac9a2ed4fc07b4dd4b4656dab 341 Gene3D G3DSA:3.90.1570.10 48 182 2.3E-6 T 15-10-2018 THII_2302 ddda208ac9a2ed4fc07b4dd4b4656dab 341 SUPERFAMILY SSF52980 73 192 8.04E-7 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2083 ab517f279e9d33814bad037619984d9c 131 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 6 128 39.604 T 15-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 THII_2083 ab517f279e9d33814bad037619984d9c 131 Gene3D G3DSA:2.40.50.100 3 130 2.5E-50 T 15-10-2018 THII_2083 ab517f279e9d33814bad037619984d9c 131 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 50 79 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 THII_2083 ab517f279e9d33814bad037619984d9c 131 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 5 130 9.1E-50 T 15-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 THII_2083 ab517f279e9d33814bad037619984d9c 131 SUPERFAMILY SSF51230 5 128 2.2E-43 T 15-10-2018 IPR011053 Single hybrid motif THII_2083 ab517f279e9d33814bad037619984d9c 131 Pfam PF01597 Glycine cleavage H-protein 9 129 5.5E-47 T 15-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate THII_3110 ce2e1bf9fdad551a7cdeabb4c6dde4ae 154 SUPERFAMILY SSF47175 27 152 1.77E-26 T 15-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 THII_3110 ce2e1bf9fdad551a7cdeabb4c6dde4ae 154 Pfam PF01322 Cytochrome C' 30 151 1.7E-27 T 15-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 THII_3110 ce2e1bf9fdad551a7cdeabb4c6dde4ae 154 PIRSF PIRSF000027 9 153 1.4E-29 T 15-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 THII_3110 ce2e1bf9fdad551a7cdeabb4c6dde4ae 154 Gene3D G3DSA:1.20.120.10 25 153 3.6E-32 T 15-10-2018 THII_2055 976ef97ad3994c9531cc7d45a016a5a4 246 Pfam PF00588 SpoU rRNA Methylase family 5 153 1.4E-33 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 THII_2055 976ef97ad3994c9531cc7d45a016a5a4 246 PIRSF PIRSF004808 1 245 3.8E-68 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 THII_2055 976ef97ad3994c9531cc7d45a016a5a4 246 SUPERFAMILY SSF75217 5 160 4.77E-36 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases THII_2055 976ef97ad3994c9531cc7d45a016a5a4 246 Gene3D G3DSA:1.10.8.590 177 239 1.3E-24 T 15-10-2018 THII_2055 976ef97ad3994c9531cc7d45a016a5a4 246 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 3 239 2.6E-69 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 THII_2055 976ef97ad3994c9531cc7d45a016a5a4 246 Gene3D G3DSA:3.40.1280.10 1 164 5.1E-61 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THII_0286 423df487f2ca01a26e5a871349d0fe4d 314 Gene3D G3DSA:3.40.50.720 7 295 1.6E-107 T 15-10-2018 THII_0286 423df487f2ca01a26e5a871349d0fe4d 314 Gene3D G3DSA:3.90.25.10 169 304 1.6E-107 T 15-10-2018 THII_0286 423df487f2ca01a26e5a871349d0fe4d 314 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 306 49.895 T 15-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 THII_0286 423df487f2ca01a26e5a871349d0fe4d 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 238 1.4E-78 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 THII_0286 423df487f2ca01a26e5a871349d0fe4d 314 SUPERFAMILY SSF51735 2 308 9.18E-78 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2228 05933d2c51ad75ab7b0d7ac32ca23566 80 Gene3D G3DSA:1.10.443.10 1 79 2.7E-12 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 THII_2228 05933d2c51ad75ab7b0d7ac32ca23566 80 SUPERFAMILY SSF56349 2 75 9.71E-13 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 THII_2228 05933d2c51ad75ab7b0d7ac32ca23566 80 Pfam PF00589 Phage integrase family 3 65 5.6E-9 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 THII_0617 01ad150e9c753770cce3bfa0eeff70b0 246 SUPERFAMILY SSF103501 3 233 1.57E-41 T 15-10-2018 IPR036197 NarG-like superfamily THII_0617 01ad150e9c753770cce3bfa0eeff70b0 246 Pfam PF02665 Nitrate reductase gamma subunit 64 212 1.1E-13 T 15-10-2018 IPR023234 NarG-like domain THII_0617 01ad150e9c753770cce3bfa0eeff70b0 246 Gene3D G3DSA:1.20.950.20 47 219 1.3E-17 T 15-10-2018 THII_2774 7aa5325cf1325348a4a9ded6d8d1b583 534 Gene3D G3DSA:3.40.50.2300 171 460 1.5E-65 T 15-10-2018 THII_2774 7aa5325cf1325348a4a9ded6d8d1b583 534 Pfam PF13458 Periplasmic binding protein 168 470 3.2E-33 T 15-10-2018 IPR028081 Leucine-binding protein domain THII_2774 7aa5325cf1325348a4a9ded6d8d1b583 534 Gene3D G3DSA:3.40.50.2300 269 395 1.5E-65 T 15-10-2018 THII_2774 7aa5325cf1325348a4a9ded6d8d1b583 534 SUPERFAMILY SSF53822 166 493 2.47E-59 T 15-10-2018 IPR028082 Periplasmic binding protein-like I THII_2940 4eadd7b4cfba46bec17000b991e69ea9 271 SUPERFAMILY SSF81336 90 262 1.83E-38 T 15-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2940 4eadd7b4cfba46bec17000b991e69ea9 271 ProSitePatterns PS00449 ATP synthase a subunit signature. 204 213 - T 15-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2940 4eadd7b4cfba46bec17000b991e69ea9 271 Pfam PF00119 ATP synthase A chain 40 262 3.8E-49 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2940 4eadd7b4cfba46bec17000b991e69ea9 271 Hamap MF_01393 ATP synthase subunit a [atpB]. 18 268 14.336 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2940 4eadd7b4cfba46bec17000b991e69ea9 271 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 24 263 1.6E-34 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_2940 4eadd7b4cfba46bec17000b991e69ea9 271 Gene3D G3DSA:1.20.120.220 89 268 2.9E-53 T 15-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 THII_1676 280c66c42c5e1fa3964e3a521248c379 257 Gene3D G3DSA:1.10.3480.10 40 236 1.1E-26 T 15-10-2018 THII_1676 280c66c42c5e1fa3964e3a521248c379 257 SUPERFAMILY SSF89155 38 223 4.97E-20 T 15-10-2018 IPR036411 TorD-like superfamily THII_1676 280c66c42c5e1fa3964e3a521248c379 257 Pfam PF02613 Nitrate reductase delta subunit 78 203 2.6E-14 T 15-10-2018 IPR020945 DMSO/Nitrate reductase chaperone THII_2259 feb359aee65724ac2ff4cc4a62d3547c 91 Gene3D G3DSA:3.30.2310.20 1 86 2.1E-16 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2259 feb359aee65724ac2ff4cc4a62d3547c 91 SUPERFAMILY SSF143011 2 82 1.96E-17 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2259 feb359aee65724ac2ff4cc4a62d3547c 91 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 84 8.8E-6 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family THII_0425 fa97a2822e04bf6614e7f4552395eb2d 261 Gene3D G3DSA:3.40.50.150 2 192 5.4E-66 T 15-10-2018 THII_0425 fa97a2822e04bf6614e7f4552395eb2d 261 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 5 256 8.1E-85 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 THII_0425 fa97a2822e04bf6614e7f4552395eb2d 261 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 4 258 54.241 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 THII_0425 fa97a2822e04bf6614e7f4552395eb2d 261 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 36 63 - T 15-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 THII_0425 fa97a2822e04bf6614e7f4552395eb2d 261 SUPERFAMILY SSF53335 12 257 2.34E-74 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0425 fa97a2822e04bf6614e7f4552395eb2d 261 Pfam PF00398 Ribosomal RNA adenine dimethylase 5 256 2.1E-65 T 15-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm THII_0425 fa97a2822e04bf6614e7f4552395eb2d 261 Gene3D G3DSA:1.10.8.100 197 261 1.1E-23 T 15-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 THII_0425 fa97a2822e04bf6614e7f4552395eb2d 261 SMART SM00650 20 191 1.7E-74 T 15-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 THII_1611 8146af9d964a8e571492e380ab256f06 179 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 128 0.0026 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1611 8146af9d964a8e571492e380ab256f06 179 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 42 5.9E-5 T 15-10-2018 IPR001451 Hexapeptide repeat THII_1611 8146af9d964a8e571492e380ab256f06 179 Gene3D G3DSA:2.160.10.10 3 179 1.1E-49 T 15-10-2018 THII_1611 8146af9d964a8e571492e380ab256f06 179 SUPERFAMILY SSF51161 6 173 5.96E-39 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_2876 e2e71a309a564214b4100a18741cdc89 108 SUPERFAMILY SSF46626 6 97 1.45E-14 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2876 e2e71a309a564214b4100a18741cdc89 108 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 34 96 3.2E-9 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_2876 e2e71a309a564214b4100a18741cdc89 108 Gene3D G3DSA:1.10.760.10 15 98 6.5E-13 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_3190 b28d9efab088402c062432fc77d99889 179 Pfam PF05685 Putative restriction endonuclease 22 150 8.8E-14 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3190 b28d9efab088402c062432fc77d99889 179 Gene3D G3DSA:3.90.1570.10 3 178 5.4E-18 T 15-10-2018 THII_3190 b28d9efab088402c062432fc77d99889 179 SUPERFAMILY SSF52980 64 175 1.93E-15 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3381 a7b368246d8498a4473116478b909063 83 SUPERFAMILY SSF89447 4 46 2.09E-8 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily THII_3381 a7b368246d8498a4473116478b909063 83 Gene3D G3DSA:2.10.260.10 1 48 2.2E-6 T 15-10-2018 THII_3381 a7b368246d8498a4473116478b909063 83 SMART SM00966 7 50 0.003 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 THII_0711 378201e882317a6da15ee47726d81650 155 Gene3D G3DSA:2.60.40.3340 20 155 2.4E-35 T 15-10-2018 THII_0711 378201e882317a6da15ee47726d81650 155 Pfam PF14467 Domain of unknown function (DUF4426) 31 154 5.5E-36 T 15-10-2018 IPR025218 Domain of unknown function DUF4426 THII_2632 ce46dd511d2b815f9615c62a2e4241cf 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.7E-37 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 THII_2632 ce46dd511d2b815f9615c62a2e4241cf 107 Gene3D G3DSA:2.60.300.12 2 107 2.4E-38 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 THII_2632 ce46dd511d2b815f9615c62a2e4241cf 107 SUPERFAMILY SSF89360 1 96 1.06E-32 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 THII_2632 ce46dd511d2b815f9615c62a2e4241cf 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.1E-53 T 15-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 THII_2632 ce46dd511d2b815f9615c62a2e4241cf 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 THII_2632 ce46dd511d2b815f9615c62a2e4241cf 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.9E-26 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 THII_1187 6ccfdfc9215306acc72d0f6a3de6a21b 555 SUPERFAMILY SSF53474 251 505 1.6E-13 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1123 9c59797fbc25777eee7093e889a9a7c2 313 SUPERFAMILY SSF53300 46 212 7.79E-6 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_0284 034e72e3dc8aeb243c1ea7a30eedd58e 316 Pfam PF04754 Putative transposase, YhgA-like 5 151 4.9E-31 T 15-10-2018 IPR006842 Transposase (putative), YhgA-like THII_0284 034e72e3dc8aeb243c1ea7a30eedd58e 316 Pfam PF14261 Domain of unknown function (DUF4351) 259 311 2.0E-6 T 15-10-2018 IPR025587 Domain of unknown function DUF4351 THII_2057 725bf4f8880df7e4aa150dcb66598212 1157 Gene3D G3DSA:3.40.50.300 1 351 1.0E-16 T 15-10-2018 THII_2057 725bf4f8880df7e4aa150dcb66598212 1157 Gene3D G3DSA:3.40.50.300 889 1148 2.1E-17 T 15-10-2018 THII_2057 725bf4f8880df7e4aa150dcb66598212 1157 SUPERFAMILY SSF52540 1 1144 4.71E-18 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2057 725bf4f8880df7e4aa150dcb66598212 1157 Pfam PF13514 AAA domain 1 207 1.5E-65 T 15-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain THII_3061 4e1c6832a403123a6ae7068784cb74a9 140 Gene3D G3DSA:2.40.70.10 17 122 2.8E-7 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily THII_3061 4e1c6832a403123a6ae7068784cb74a9 140 TIGRFAM TIGR03698 clan_AA_DTGF: clan AA aspartic protease, AF_0612 family 6 110 1.3E-22 T 15-10-2018 IPR022274 Peptidase aspartic, AF0612 THII_3643 da5591f038ae077045157459b65e3afb 265 Pfam PF07788 PD-(D/E)XK nuclease superfamily 184 252 2.6E-24 T 15-10-2018 IPR012431 PD-(D/E)XK nuclease THII_3643 da5591f038ae077045157459b65e3afb 265 Pfam PF12644 Protein of unknown function (DUF3782) 107 183 4.2E-21 T 15-10-2018 IPR024271 Protein of unknown function DUF3782 THII_3643 da5591f038ae077045157459b65e3afb 265 SUPERFAMILY SSF52980 65 258 7.51E-9 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2176 63e7d2410e20b69a9b5462aea93e7ddd 167 SUPERFAMILY SSF50341 10 153 2.49E-40 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_2176 63e7d2410e20b69a9b5462aea93e7ddd 167 Gene3D G3DSA:2.40.50.180 30 144 2.0E-42 T 15-10-2018 THII_2176 63e7d2410e20b69a9b5462aea93e7ddd 167 SMART SM00260 7 149 1.9E-39 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_2176 63e7d2410e20b69a9b5462aea93e7ddd 167 Gene3D G3DSA:2.30.30.40 13 143 2.0E-42 T 15-10-2018 THII_2176 63e7d2410e20b69a9b5462aea93e7ddd 167 Pfam PF01584 CheW-like domain 12 151 4.0E-36 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_3045 f9880411077c543dd7262ce7c2748c01 434 Pfam PF03160 Calx-beta domain 54 148 2.3E-11 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_3045 f9880411077c543dd7262ce7c2748c01 434 Gene3D G3DSA:2.60.40.2030 56 173 1.6E-21 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_3045 f9880411077c543dd7262ce7c2748c01 434 SUPERFAMILY SSF141072 55 174 3.27E-22 T 15-10-2018 IPR038081 CalX-like domain superfamily THII_3045 f9880411077c543dd7262ce7c2748c01 434 SMART SM00237 46 149 0.003 T 15-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 THII_1500 bd561013e826cc6e99e8fff8f203f148 345 PIRSF PIRSF000294 13 342 7.4E-110 T 15-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 THII_1500 bd561013e826cc6e99e8fff8f203f148 345 Pfam PF00034 Cytochrome c 201 322 2.1E-6 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1500 bd561013e826cc6e99e8fff8f203f148 345 Gene3D G3DSA:1.10.760.10 179 325 4.0E-113 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1500 bd561013e826cc6e99e8fff8f203f148 345 SUPERFAMILY SSF46626 179 332 1.73E-34 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1500 bd561013e826cc6e99e8fff8f203f148 345 SUPERFAMILY SSF46626 21 180 3.5E-52 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1500 bd561013e826cc6e99e8fff8f203f148 345 Pfam PF03150 Di-haem cytochrome c peroxidase 43 192 1.4E-53 T 15-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 THII_1500 bd561013e826cc6e99e8fff8f203f148 345 Gene3D G3DSA:1.10.760.10 39 326 4.0E-113 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2767 265d61f419f47e499c16b8aaf60b5b60 212 SUPERFAMILY SSF54523 8 121 2.59E-8 T 15-10-2018 THII_2767 265d61f419f47e499c16b8aaf60b5b60 212 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 2.9E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2767 265d61f419f47e499c16b8aaf60b5b60 212 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2767 265d61f419f47e499c16b8aaf60b5b60 212 Gene3D G3DSA:3.30.700.10 8 202 6.7E-5 T 15-10-2018 THII_3664 6ecb855136528c15937e19e55a11673d 185 Gene3D G3DSA:3.40.30.10 1 185 7.9E-58 T 15-10-2018 THII_3664 6ecb855136528c15937e19e55a11673d 185 SUPERFAMILY SSF52833 5 185 1.64E-52 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_3664 6ecb855136528c15937e19e55a11673d 185 Pfam PF00578 AhpC/TSA family 12 134 3.8E-19 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 THII_0778 d3866d23c94ce89ef83358bd65cd5ce3 1181 Gene3D G3DSA:3.50.50.60 526 577 2.3E-6 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0778 d3866d23c94ce89ef83358bd65cd5ce3 1181 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 395 743 5.0E-10 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_0778 d3866d23c94ce89ef83358bd65cd5ce3 1181 SUPERFAMILY SSF51971 393 738 3.1E-21 T 15-10-2018 THII_0778 d3866d23c94ce89ef83358bd65cd5ce3 1181 Gene3D G3DSA:2.40.30.10 849 954 1.3E-9 T 15-10-2018 THII_0778 d3866d23c94ce89ef83358bd65cd5ce3 1181 Gene3D G3DSA:3.40.50.720 479 525 2.3E-6 T 15-10-2018 THII_0778 d3866d23c94ce89ef83358bd65cd5ce3 1181 Gene3D G3DSA:3.50.50.60 644 739 4.4E-8 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0778 d3866d23c94ce89ef83358bd65cd5ce3 1181 SUPERFAMILY SSF63380 853 954 8.5E-7 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel THII_3401 e78cf060c84aeed3a49526ac07c8c10a 156 Pfam PF03840 Preprotein translocase SecG subunit 5 73 1.1E-22 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 THII_3401 e78cf060c84aeed3a49526ac07c8c10a 156 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 1.9E-36 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 THII_3401 e78cf060c84aeed3a49526ac07c8c10a 156 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 1.9E-36 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 THII_3401 e78cf060c84aeed3a49526ac07c8c10a 156 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 1.9E-36 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 THII_3401 e78cf060c84aeed3a49526ac07c8c10a 156 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 1.9E-36 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 THII_3401 e78cf060c84aeed3a49526ac07c8c10a 156 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 74 5.8E-28 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 THII_2453 e19f97b73202117b4034262d277696ef 158 Gene3D G3DSA:3.90.1570.10 4 158 1.1E-17 T 15-10-2018 THII_2453 e19f97b73202117b4034262d277696ef 158 SUPERFAMILY SSF52980 12 142 1.13E-19 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2453 e19f97b73202117b4034262d277696ef 158 Pfam PF05685 Putative restriction endonuclease 10 142 4.3E-16 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2205 ba24f45efd44b8cfd89b415f08425303 80 SUPERFAMILY SSF47336 3 79 1.83E-13 T 15-10-2018 IPR036736 ACP-like superfamily THII_2205 ba24f45efd44b8cfd89b415f08425303 80 Pfam PF00550 Phosphopantetheine attachment site 19 75 1.2E-5 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2205 ba24f45efd44b8cfd89b415f08425303 80 Gene3D G3DSA:1.10.1200.10 1 79 7.1E-19 T 15-10-2018 IPR036736 ACP-like superfamily THII_0517 502fd003788139602dc6116ad045e3b0 120 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 3 120 21.001 T 15-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 THII_0517 502fd003788139602dc6116ad045e3b0 120 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 25 119 4.8E-42 T 15-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0517 502fd003788139602dc6116ad045e3b0 120 Gene3D G3DSA:1.20.58.1610 3 120 4.4E-47 T 15-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1581 5cb27f886e86fdcf2daafb26ebc5a301 352 Pfam PF02486 Replication initiation factor 145 313 5.3E-31 T 15-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 THII_0180 cf736b8d2690fae7983671bf8ba4657c 108 PRINTS PR00421 Thioredoxin family signature 32 41 7.7E-10 T 15-10-2018 THII_0180 cf736b8d2690fae7983671bf8ba4657c 108 PRINTS PR00421 Thioredoxin family signature 24 32 7.7E-10 T 15-10-2018 THII_0180 cf736b8d2690fae7983671bf8ba4657c 108 PRINTS PR00421 Thioredoxin family signature 72 83 7.7E-10 T 15-10-2018 THII_0180 cf736b8d2690fae7983671bf8ba4657c 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 THII_0180 cf736b8d2690fae7983671bf8ba4657c 108 Pfam PF00085 Thioredoxin 5 105 3.9E-32 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 THII_0180 cf736b8d2690fae7983671bf8ba4657c 108 Gene3D G3DSA:3.40.30.10 4 108 1.0E-32 T 15-10-2018 THII_0180 cf736b8d2690fae7983671bf8ba4657c 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.2E-37 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 THII_0180 cf736b8d2690fae7983671bf8ba4657c 108 SUPERFAMILY SSF52833 3 108 9.4E-39 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_0180 cf736b8d2690fae7983671bf8ba4657c 108 PIRSF PIRSF000077 2 108 1.8E-43 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 THII_3211 618608e0978d3f738db21d4569921e39 189 Pfam PF05685 Putative restriction endonuclease 13 172 5.8E-31 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3211 618608e0978d3f738db21d4569921e39 189 Gene3D G3DSA:3.90.1570.10 2 189 1.4E-17 T 15-10-2018 THII_3211 618608e0978d3f738db21d4569921e39 189 SUPERFAMILY SSF52980 4 164 6.97E-21 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2373 c8cc51fd2a892cd182413f2560e15012 327 Pfam PF00226 DnaJ domain 4 65 3.3E-11 T 15-10-2018 IPR001623 DnaJ domain THII_2373 c8cc51fd2a892cd182413f2560e15012 327 SMART SM00271 3 60 1.4E-4 T 15-10-2018 IPR001623 DnaJ domain THII_2373 c8cc51fd2a892cd182413f2560e15012 327 Gene3D G3DSA:1.10.287.110 1 85 9.9E-15 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_2373 c8cc51fd2a892cd182413f2560e15012 327 SUPERFAMILY SSF46565 3 68 1.96E-12 T 15-10-2018 IPR036869 Chaperone J-domain superfamily THII_2373 c8cc51fd2a892cd182413f2560e15012 327 Pfam PF03703 Bacterial PH domain 239 296 7.7E-11 T 15-10-2018 IPR005182 Domain of unknown function DUF304 THII_2373 c8cc51fd2a892cd182413f2560e15012 327 PRINTS PR00625 DnaJ domain signature 40 60 6.2E-6 T 15-10-2018 IPR001623 DnaJ domain THII_2373 c8cc51fd2a892cd182413f2560e15012 327 PRINTS PR00625 DnaJ domain signature 6 24 6.2E-6 T 15-10-2018 IPR001623 DnaJ domain THII_3523 9a7136cb5110ca5f6b9b97adbb35f206 535 Pfam PF14870 Photosynthesis system II assembly factor YCF48 110 266 6.1E-8 T 15-10-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain THII_3523 9a7136cb5110ca5f6b9b97adbb35f206 535 Gene3D G3DSA:2.130.10.10 24 168 1.9E-11 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3523 9a7136cb5110ca5f6b9b97adbb35f206 535 Gene3D G3DSA:2.130.10.10 169 299 6.6E-10 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3523 9a7136cb5110ca5f6b9b97adbb35f206 535 SUPERFAMILY SSF110296 46 287 2.88E-31 T 15-10-2018 THII_2079 2111f01dcbd240bba1a9bce31c4bd2da 271 Pfam PF12146 Serine aminopeptidase, S33 80 180 4.3E-8 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 THII_2079 2111f01dcbd240bba1a9bce31c4bd2da 271 SUPERFAMILY SSF53474 30 271 3.24E-43 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_2079 2111f01dcbd240bba1a9bce31c4bd2da 271 Gene3D G3DSA:3.40.50.1820 25 271 8.2E-36 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1987 0936dda6d4cdbac380c980e6c1472395 857 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 635 814 2.8E-35 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_1987 0936dda6d4cdbac380c980e6c1472395 857 SMART SM00304 524 575 0.73 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1987 0936dda6d4cdbac380c980e6c1472395 857 SMART SM00304 465 517 1.8E-6 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1987 0936dda6d4cdbac380c980e6c1472395 857 SMART SM00304 666 729 100.0 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1987 0936dda6d4cdbac380c980e6c1472395 857 Gene3D G3DSA:1.10.287.950 524 853 7.5E-51 T 15-10-2018 THII_1987 0936dda6d4cdbac380c980e6c1472395 857 Pfam PF00672 HAMP domain 466 510 1.1E-7 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 THII_1987 0936dda6d4cdbac380c980e6c1472395 857 Gene3D G3DSA:1.20.1480.50 427 523 1.4E-7 T 15-10-2018 THII_1987 0936dda6d4cdbac380c980e6c1472395 857 SUPERFAMILY SSF58104 485 852 7.98E-56 T 15-10-2018 THII_1987 0936dda6d4cdbac380c980e6c1472395 857 SMART SM00283 579 851 2.1E-43 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 THII_1493 5b55f5f47825209ccc6aa52a9e4cb099 111 Pfam PF00462 Glutaredoxin 16 80 1.5E-20 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 THII_1493 5b55f5f47825209ccc6aa52a9e4cb099 111 PIRSF PIRSF005894 1 107 8.3E-50 T 15-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 THII_1493 5b55f5f47825209ccc6aa52a9e4cb099 111 SUPERFAMILY SSF52833 1 102 1.16E-37 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_1493 5b55f5f47825209ccc6aa52a9e4cb099 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.7E-46 T 15-10-2018 IPR004480 Monothiol glutaredoxin-related THII_1493 5b55f5f47825209ccc6aa52a9e4cb099 111 Gene3D G3DSA:3.40.30.10 2 106 4.5E-35 T 15-10-2018 THII_2146 ab1bb25e874eda317a45cb5969bd7cd7 76 SUPERFAMILY SSF143120 1 44 6.67E-5 T 15-10-2018 IPR036165 YefM-like superfamily THII_2146 ab1bb25e874eda317a45cb5969bd7cd7 76 Gene3D G3DSA:3.40.1620.10 1 39 6.9E-7 T 15-10-2018 THII_2146 ab1bb25e874eda317a45cb5969bd7cd7 76 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 42 5.4E-6 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_1576 45ed1addf9db1a880f8917126857cc2f 318 SUPERFAMILY SSF51735 1 257 2.76E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1576 45ed1addf9db1a880f8917126857cc2f 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 213 3.9E-21 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 THII_1576 45ed1addf9db1a880f8917126857cc2f 318 Gene3D G3DSA:3.40.50.720 2 276 2.4E-48 T 15-10-2018 THII_2303 1b1cf853c326dca12672105f4d7d8513 615 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 559 5.8E-153 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 THII_2303 1b1cf853c326dca12672105f4d7d8513 615 Pfam PF13537 Glutamine amidotransferase domain 45 163 8.0E-44 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain THII_2303 1b1cf853c326dca12672105f4d7d8513 615 Gene3D G3DSA:3.60.20.10 9 183 1.1E-60 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_2303 1b1cf853c326dca12672105f4d7d8513 615 PIRSF PIRSF001589 1 612 5.0E-157 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 THII_2303 1b1cf853c326dca12672105f4d7d8513 615 SUPERFAMILY SSF56235 1 223 7.21E-63 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_2303 1b1cf853c326dca12672105f4d7d8513 615 Pfam PF00733 Asparagine synthase 242 601 2.1E-88 T 15-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 THII_2303 1b1cf853c326dca12672105f4d7d8513 615 SUPERFAMILY SSF52402 236 610 9.69E-78 T 15-10-2018 THII_3943 56b127e9d0856f7adb44bb077ab1c9e3 292 Gene3D G3DSA:3.90.1570.10 24 142 7.3E-6 T 15-10-2018 THII_3943 56b127e9d0856f7adb44bb077ab1c9e3 292 SUPERFAMILY SSF52980 25 164 9.12E-14 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3943 56b127e9d0856f7adb44bb077ab1c9e3 292 Pfam PF05685 Putative restriction endonuclease 27 172 1.1E-20 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3943 56b127e9d0856f7adb44bb077ab1c9e3 292 SUPERFAMILY SSF58104 207 283 4.97E-6 T 15-10-2018 THII_3864 886e719601a21153b9bc2a23daba23df 374 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 THII_3864 886e719601a21153b9bc2a23daba23df 374 ProSitePatterns PS00789 Chorismate synthase signature 3. 321 337 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 THII_3864 886e719601a21153b9bc2a23daba23df 374 SUPERFAMILY SSF103263 4 353 4.32E-145 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 THII_3864 886e719601a21153b9bc2a23daba23df 374 TIGRFAM TIGR00033 aroC: chorismate synthase 10 352 1.7E-139 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 THII_3864 886e719601a21153b9bc2a23daba23df 374 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 36.794 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 THII_3864 886e719601a21153b9bc2a23daba23df 374 Gene3D G3DSA:3.60.150.10 1 364 6.1E-153 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 THII_3864 886e719601a21153b9bc2a23daba23df 374 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 THII_3864 886e719601a21153b9bc2a23daba23df 374 PIRSF PIRSF001456 3 371 4.5E-138 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 THII_3864 886e719601a21153b9bc2a23daba23df 374 Pfam PF01264 Chorismate synthase 10 347 1.8E-137 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 THII_1223 2ae663a6cf5a7588c4b6464604dcc7af 627 Gene3D G3DSA:1.20.1460.20 47 276 7.9E-8 T 15-10-2018 THII_1223 2ae663a6cf5a7588c4b6464604dcc7af 627 Gene3D G3DSA:3.30.70.2170 31 297 7.9E-8 T 15-10-2018 THII_1223 2ae663a6cf5a7588c4b6464604dcc7af 627 Gene3D G3DSA:3.30.70.2750 136 210 7.9E-8 T 15-10-2018 THII_1223 2ae663a6cf5a7588c4b6464604dcc7af 627 Pfam PF01496 V-type ATPase 116kDa subunit family 167 384 3.5E-21 T 15-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_1223 2ae663a6cf5a7588c4b6464604dcc7af 627 Pfam PF01496 V-type ATPase 116kDa subunit family 519 622 2.1E-9 T 15-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_1600 c01ea36b7dcdc53e5b4d401c85c7fb16 242 SUPERFAMILY SSF102405 20 219 4.12E-58 T 15-10-2018 THII_1600 c01ea36b7dcdc53e5b4d401c85c7fb16 242 Gene3D G3DSA:3.40.50.450 20 240 8.3E-64 T 15-10-2018 THII_1600 c01ea36b7dcdc53e5b4d401c85c7fb16 242 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 47 222 9.9E-46 T 15-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG THII_1600 c01ea36b7dcdc53e5b4d401c85c7fb16 242 Pfam PF03641 Possible lysine decarboxylase 89 218 9.8E-34 T 15-10-2018 IPR031100 LOG family THII_3866 81f874f0143f0f12d92dc70c517f422e 355 Gene3D G3DSA:1.10.1670.10 9 211 2.2E-84 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 THII_3866 81f874f0143f0f12d92dc70c517f422e 355 Pfam PF00633 Helix-hairpin-helix motif 100 127 1.3E-7 T 15-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 THII_3866 81f874f0143f0f12d92dc70c517f422e 355 SUPERFAMILY SSF55811 220 345 1.64E-21 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 THII_3866 81f874f0143f0f12d92dc70c517f422e 355 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 168 4.0E-15 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 THII_3866 81f874f0143f0f12d92dc70c517f422e 355 ProSitePatterns PS01155 Endonuclease III family signature. 102 129 - T 15-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 THII_3866 81f874f0143f0f12d92dc70c517f422e 355 Pfam PF14815 NUDIX domain 235 344 2.2E-21 T 15-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 THII_3866 81f874f0143f0f12d92dc70c517f422e 355 SMART SM00478 39 190 1.7E-35 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 THII_3866 81f874f0143f0f12d92dc70c517f422e 355 SUPERFAMILY SSF48150 4 221 4.87E-70 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 THII_3866 81f874f0143f0f12d92dc70c517f422e 355 Gene3D G3DSA:3.90.79.10 225 350 1.7E-12 T 15-10-2018 THII_3866 81f874f0143f0f12d92dc70c517f422e 355 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 275 2.5E-108 T 15-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 THII_3866 81f874f0143f0f12d92dc70c517f422e 355 Gene3D G3DSA:1.10.340.30 21 132 2.2E-84 T 15-10-2018 THII_0740 c57b5e191a70320038076607bdc7b31b 268 SUPERFAMILY SSF53328 1 198 4.45E-31 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_0740 c57b5e191a70320038076607bdc7b31b 268 Gene3D G3DSA:3.40.50.12230 1 265 5.0E-41 T 15-10-2018 THII_0740 c57b5e191a70320038076607bdc7b31b 268 Pfam PF00551 Formyl transferase 2 170 6.1E-11 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 THII_3415 433a5b2d717d07de41ad49d090b45660 412 SUPERFAMILY SSF52172 5 163 8.25E-41 T 15-10-2018 IPR011006 CheY-like superfamily THII_3415 433a5b2d717d07de41ad49d090b45660 412 Gene3D G3DSA:3.30.565.10 280 411 1.2E-16 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3415 433a5b2d717d07de41ad49d090b45660 412 SMART SM00448 5 118 7.3E-37 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_3415 433a5b2d717d07de41ad49d090b45660 412 SMART SM00387 303 411 6.9E-6 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3415 433a5b2d717d07de41ad49d090b45660 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 410 6.9E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3415 433a5b2d717d07de41ad49d090b45660 412 SUPERFAMILY SSF55874 305 407 3.42E-13 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3415 433a5b2d717d07de41ad49d090b45660 412 Gene3D G3DSA:3.40.50.12740 4 220 2.5E-45 T 15-10-2018 THII_3415 433a5b2d717d07de41ad49d090b45660 412 Pfam PF00072 Response regulator receiver domain 8 118 2.7E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2457 692d8b3d3e459c63da6935c56f9cb6bb 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 3.7E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2457 692d8b3d3e459c63da6935c56f9cb6bb 147 SUPERFAMILY SSF54523 10 146 1.15E-21 T 15-10-2018 THII_2457 692d8b3d3e459c63da6935c56f9cb6bb 147 Gene3D G3DSA:3.30.700.10 9 147 1.1E-25 T 15-10-2018 THII_2457 692d8b3d3e459c63da6935c56f9cb6bb 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.5E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2457 692d8b3d3e459c63da6935c56f9cb6bb 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2203 ac0aa4e4bf86bf38cdffc58eaf94dcaa 263 SUPERFAMILY SSF53335 7 222 5.37E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2203 ac0aa4e4bf86bf38cdffc58eaf94dcaa 263 Gene3D G3DSA:3.40.50.150 2 263 1.0E-48 T 15-10-2018 THII_2203 ac0aa4e4bf86bf38cdffc58eaf94dcaa 263 Pfam PF13649 Methyltransferase domain 67 159 2.5E-13 T 15-10-2018 THII_3188 0691f890b287f6f1b50e094e6fb854d6 464 Pfam PF06572 Protein of unknown function (DUF1131) 165 323 9.2E-10 T 15-10-2018 IPR010938 Protein of unknown function DUF1131 THII_3188 0691f890b287f6f1b50e094e6fb854d6 464 Gene3D G3DSA:1.20.1270.180 358 463 3.1E-7 T 15-10-2018 THII_3188 0691f890b287f6f1b50e094e6fb854d6 464 Pfam PF07007 Lysozyme inhibitor LprI 364 453 4.6E-8 T 15-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal THII_3188 0691f890b287f6f1b50e094e6fb854d6 464 Gene3D G3DSA:2.60.460.10 159 324 5.0E-18 T 15-10-2018 IPR038714 YfeY-like superfamily THII_0575 52d427387bb8ec4a7574f2430ac4bf37 665 Pfam PF09484 CRISPR-associated protein TM1802 (cas_TM1802) 34 647 6.4E-43 T 15-10-2018 IPR013389 CRISPR-associated protein Cas8b THII_3926 f7f883c35e8687e2c4e2d831adc4816b 196 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 185 7.6E-53 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 THII_3926 f7f883c35e8687e2c4e2d831adc4816b 196 SMART SM01207 9 186 1.2E-80 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 THII_3926 f7f883c35e8687e2c4e2d831adc4816b 196 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 8.5E-61 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 THII_3926 f7f883c35e8687e2c4e2d831adc4816b 196 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 194 20.061 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 THII_1982 2dbf57f71d12fb0df83a16d8dfda37f8 256 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 254 29.471 T 15-10-2018 IPR009777 Cell division protein ZapD THII_1982 2dbf57f71d12fb0df83a16d8dfda37f8 256 Gene3D G3DSA:1.10.3900.10 13 180 1.1E-79 T 15-10-2018 THII_1982 2dbf57f71d12fb0df83a16d8dfda37f8 256 Pfam PF07072 Cell division protein 19 229 3.1E-63 T 15-10-2018 IPR009777 Cell division protein ZapD THII_1982 2dbf57f71d12fb0df83a16d8dfda37f8 256 SUPERFAMILY SSF160950 4 254 3.27E-72 T 15-10-2018 IPR036268 ZapD domain superfamily THII_1982 2dbf57f71d12fb0df83a16d8dfda37f8 256 Gene3D G3DSA:2.60.440.10 6 254 1.1E-79 T 15-10-2018 IPR027462 Z ring-associated protein D, C-terminal THII_0884 b4536aeaae11060317014edbfcc04ab8 156 SUPERFAMILY SSF46767 62 141 8.11E-28 T 15-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 THII_0884 b4536aeaae11060317014edbfcc04ab8 156 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 62 139 2.2E-28 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 THII_0884 b4536aeaae11060317014edbfcc04ab8 156 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 62 141 6.8E-30 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 THII_0884 b4536aeaae11060317014edbfcc04ab8 156 Gene3D G3DSA:1.10.10.10 58 141 4.9E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_0925 b91b7b9b120a03c3d03e8654f12596fb 480 Gene3D G3DSA:3.40.50.300 125 308 2.0E-18 T 15-10-2018 THII_0925 b91b7b9b120a03c3d03e8654f12596fb 480 SUPERFAMILY SSF52540 116 385 3.1E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3105 9ce77e6a1801a6d9709b5bc659a2d13c 153 SUPERFAMILY SSF54862 3 133 3.26E-23 T 15-10-2018 THII_3105 9ce77e6a1801a6d9709b5bc659a2d13c 153 TIGRFAM TIGR02060 aprB: adenylylsulfate reductase, beta subunit 1 130 1.4E-61 T 15-10-2018 IPR011802 Adenylylsulphate reductase, beta subunit THII_3105 9ce77e6a1801a6d9709b5bc659a2d13c 153 Gene3D G3DSA:3.30.70.20 2 73 7.7E-28 T 15-10-2018 THII_3105 9ce77e6a1801a6d9709b5bc659a2d13c 153 Pfam PF13187 4Fe-4S dicluster domain 9 68 2.0E-9 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_3105 9ce77e6a1801a6d9709b5bc659a2d13c 153 Gene3D G3DSA:3.30.720.40 74 149 2.2E-27 T 15-10-2018 IPR038465 APS reductase, beta subunit, C-terminal domain superfamily THII_3105 9ce77e6a1801a6d9709b5bc659a2d13c 153 Pfam PF12139 Adenosine-5'-phosphosulfate reductase beta subunit 70 138 2.5E-29 T 15-10-2018 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal THII_3105 9ce77e6a1801a6d9709b5bc659a2d13c 153 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_3576 c9f90697ed19f597c406884d4e048edc 213 Gene3D G3DSA:3.30.40.60 2 143 1.7E-8 T 15-10-2018 THII_3576 c9f90697ed19f597c406884d4e048edc 213 TIGRFAM TIGR02646 TIGR02646: TIGR02646 family protein 24 150 3.0E-18 T 15-10-2018 IPR013467 Conserved hypothetical protein CHP02646 THII_1615 bc2dca930653f7c65ba2f8f49efc5531 482 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 208 263 - T 15-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1615 bc2dca930653f7c65ba2f8f49efc5531 482 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 18 446 1.8E-119 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1615 bc2dca930653f7c65ba2f8f49efc5531 482 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 12 475 4.7E-238 T 15-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 THII_1615 bc2dca930653f7c65ba2f8f49efc5531 482 SUPERFAMILY SSF81442 13 470 2.75E-128 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1615 bc2dca930653f7c65ba2f8f49efc5531 482 Gene3D G3DSA:1.20.210.10 6 476 1.7E-211 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_1723 fd675b6608064b77d5f1fbc59cc01558 287 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 285 8.4E-26 T 15-10-2018 IPR010106 Recombination-promoting nuclease RpnA THII_1723 fd675b6608064b77d5f1fbc59cc01558 287 Pfam PF12784 PD-(D/E)XK nuclease family transposase 9 244 7.5E-26 T 15-10-2018 THII_1062 c511c4cd2a0ec5f2bbbdc3ba7ab86d1d 159 Pfam PF01724 Domain of unknown function DUF29 7 144 1.2E-51 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1062 c511c4cd2a0ec5f2bbbdc3ba7ab86d1d 159 Gene3D G3DSA:1.20.1220.20 2 154 4.2E-31 T 15-10-2018 THII_0732 c2ab050afcd33d410f01ad1b9e961500 372 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 41 353 7.8E-40 T 15-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD THII_0732 c2ab050afcd33d410f01ad1b9e961500 372 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 41 358 7.9E-20 T 15-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD THII_0786 4726950540488f9082c4acded07972a8 438 Gene3D G3DSA:2.80.10.50 327 431 2.9E-12 T 15-10-2018 THII_0786 4726950540488f9082c4acded07972a8 438 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 354 410 1.2E-6 T 15-10-2018 IPR000772 Ricin B, lectin domain THII_0786 4726950540488f9082c4acded07972a8 438 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 260 342 6.7E-12 T 15-10-2018 IPR000772 Ricin B, lectin domain THII_0786 4726950540488f9082c4acded07972a8 438 SUPERFAMILY SSF50370 274 408 7.0E-24 T 15-10-2018 IPR035992 Ricin B-like lectins THII_0786 4726950540488f9082c4acded07972a8 438 SUPERFAMILY SSF57997 27 260 7.41E-5 T 15-10-2018 THII_0786 4726950540488f9082c4acded07972a8 438 Gene3D G3DSA:2.80.10.50 192 318 6.4E-6 T 15-10-2018 THII_0465 553e3db0c8631a8681bada7a3f25d040 59 SUPERFAMILY SSF54786 7 55 9.42E-11 T 15-10-2018 THII_0465 553e3db0c8631a8681bada7a3f25d040 59 Gene3D G3DSA:3.30.920.30 5 59 2.4E-11 T 15-10-2018 IPR038570 HicA superfamily THII_0465 553e3db0c8631a8681bada7a3f25d040 59 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 9 52 2.7E-12 T 15-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 THII_0164 65d4d398766c71ff6aa648f7e62e7b98 112 Gene3D G3DSA:3.40.50.1390 35 112 4.1E-13 T 15-10-2018 THII_0164 65d4d398766c71ff6aa648f7e62e7b98 112 SUPERFAMILY SSF53041 38 112 9.02E-10 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 THII_0164 65d4d398766c71ff6aa648f7e62e7b98 112 Pfam PF00239 Resolvase, N terminal domain 40 112 4.0E-10 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 THII_3239 547e53a85186216e93258a13984ed4ca 152 Pfam PF01724 Domain of unknown function DUF29 5 142 6.0E-53 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_3239 547e53a85186216e93258a13984ed4ca 152 Gene3D G3DSA:1.20.1220.20 1 151 1.6E-36 T 15-10-2018 THII_2274 dad1e153988d085fa9cca50fe1142b42 614 SUPERFAMILY SSF56235 96 204 3.67E-10 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_2274 dad1e153988d085fa9cca50fe1142b42 614 SUPERFAMILY SSF52402 214 371 1.13E-15 T 15-10-2018 THII_2274 dad1e153988d085fa9cca50fe1142b42 614 Pfam PF00733 Asparagine synthase 235 407 1.2E-8 T 15-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 THII_2274 dad1e153988d085fa9cca50fe1142b42 614 Gene3D G3DSA:3.60.20.10 61 218 7.1E-8 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal THII_2274 dad1e153988d085fa9cca50fe1142b42 614 Gene3D G3DSA:3.40.50.620 223 431 2.0E-15 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_2144 43990a24b77605727187f81e12f92b74 235 SUPERFAMILY SSF69593 36 185 2.62E-25 T 15-10-2018 THII_2144 43990a24b77605727187f81e12f92b74 235 SMART SM00563 71 183 1.3E-21 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 THII_2144 43990a24b77605727187f81e12f92b74 235 Pfam PF01553 Acyltransferase 64 181 3.0E-18 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 THII_1419 c08867212e66bfde2521e9a9b7346bf3 519 Pfam PF06097 Bacterial protein of unknown function (DUF945) 122 512 1.8E-41 T 15-10-2018 IPR010352 Protein of unknown function DUF945 THII_1085 e6a2983b22302e01618e88e0eac8ffea 130 Pfam PF01850 PIN domain 2 121 4.1E-17 T 15-10-2018 IPR002716 PIN domain THII_1085 e6a2983b22302e01618e88e0eac8ffea 130 Gene3D G3DSA:3.40.50.1010 1 128 1.7E-34 T 15-10-2018 THII_1085 e6a2983b22302e01618e88e0eac8ffea 130 SUPERFAMILY SSF88723 1 121 3.08E-22 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_1085 e6a2983b22302e01618e88e0eac8ffea 130 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 128 10.279 T 15-10-2018 IPR022907 VapC family GO:0004540 THII_1350 f10b12ff5a7f57ba4c27eeeda8cf3ffc 119 Pfam PF11162 Protein of unknown function (DUF2946) 13 109 3.4E-5 T 15-10-2018 IPR021333 Protein of unknown function DUF2946 THII_0871 b73de699645adda8d6edfc12b2aee19e 137 Gene3D G3DSA:3.40.50.1010 3 128 3.4E-7 T 15-10-2018 THII_0871 b73de699645adda8d6edfc12b2aee19e 137 Pfam PF10130 PIN domain 6 128 1.2E-27 T 15-10-2018 IPR002716 PIN domain THII_0871 b73de699645adda8d6edfc12b2aee19e 137 SUPERFAMILY SSF88723 1 123 2.13E-12 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_1636 d734af8ec406e6dbcc85147652a03371 56 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 7 54 1.8E-12 T 15-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 THII_1636 d734af8ec406e6dbcc85147652a03371 56 SUPERFAMILY SSF143011 4 55 1.31E-9 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1636 d734af8ec406e6dbcc85147652a03371 56 Gene3D G3DSA:3.30.2310.20 1 56 7.7E-13 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2029 d742d7b221b9f9a1ac3f02caefba6616 89 Gene3D G3DSA:1.10.10.10 9 83 2.5E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2029 d742d7b221b9f9a1ac3f02caefba6616 89 Pfam PF04255 Protein of unknown function (DUF433) 17 73 2.8E-22 T 15-10-2018 IPR007367 Protein of unknown function DUF433 THII_2029 d742d7b221b9f9a1ac3f02caefba6616 89 SUPERFAMILY SSF46689 9 81 5.55E-18 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_0437 d433bec2245a49cf045bc8d816f7a478 302 Pfam PF05685 Putative restriction endonuclease 30 171 9.4E-21 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0437 d433bec2245a49cf045bc8d816f7a478 302 Gene3D G3DSA:3.90.1570.10 27 145 1.4E-5 T 15-10-2018 THII_0437 d433bec2245a49cf045bc8d816f7a478 302 SUPERFAMILY SSF52980 29 145 8.58E-13 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1743 4708b995dfc30f9f32cf14768a5e48ad 245 SUPERFAMILY SSF64005 6 231 1.15E-90 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 THII_1743 4708b995dfc30f9f32cf14768a5e48ad 245 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 8 235 7.5E-94 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 THII_1743 4708b995dfc30f9f32cf14768a5e48ad 245 Gene3D G3DSA:3.40.1180.10 4 236 1.3E-97 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 THII_1743 4708b995dfc30f9f32cf14768a5e48ad 245 Pfam PF01255 Putative undecaprenyl diphosphate synthase 15 235 1.1E-82 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 THII_1743 4708b995dfc30f9f32cf14768a5e48ad 245 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 8 236 41.176 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 THII_1743 4708b995dfc30f9f32cf14768a5e48ad 245 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 181 198 - T 15-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 THII_1642 90555c32cd596f0bddc4700de3af6f55 290 SUPERFAMILY SSF52540 40 255 3.68E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1642 90555c32cd596f0bddc4700de3af6f55 290 Gene3D G3DSA:3.40.50.300 32 267 5.9E-19 T 15-10-2018 THII_1642 90555c32cd596f0bddc4700de3af6f55 290 Pfam PF00685 Sulfotransferase domain 43 259 1.1E-7 T 15-10-2018 IPR000863 Sulfotransferase domain GO:0008146 THII_1662 96fc26a06f2bc015af9d6dc1e1e6344b 246 Pfam PF12679 ABC-2 family transporter protein 67 240 4.0E-9 T 15-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 THII_2497 bc5c367ba600404e24c3f4975fa20ddb 302 Gene3D G3DSA:3.40.50.300 2 182 7.5E-46 T 15-10-2018 THII_2497 bc5c367ba600404e24c3f4975fa20ddb 302 Pfam PF07650 KH domain 208 283 1.1E-16 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_2497 bc5c367ba600404e24c3f4975fa20ddb 302 SUPERFAMILY SSF52540 10 202 1.48E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2497 bc5c367ba600404e24c3f4975fa20ddb 302 Gene3D G3DSA:3.30.300.20 185 297 8.7E-40 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta THII_2497 bc5c367ba600404e24c3f4975fa20ddb 302 Pfam PF01926 50S ribosome-binding GTPase 10 124 6.7E-24 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2497 bc5c367ba600404e24c3f4975fa20ddb 302 TIGRFAM TIGR00436 era: GTP-binding protein Era 8 278 9.6E-86 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2497 bc5c367ba600404e24c3f4975fa20ddb 302 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 164 3.8E-29 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 THII_2497 bc5c367ba600404e24c3f4975fa20ddb 302 SUPERFAMILY SSF54814 182 296 2.29E-38 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 THII_2497 bc5c367ba600404e24c3f4975fa20ddb 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 10 30 2.8E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2497 bc5c367ba600404e24c3f4975fa20ddb 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 78 96 2.8E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 THII_2497 bc5c367ba600404e24c3f4975fa20ddb 302 Hamap MF_00367 GTPase Era [era]. 5 295 34.225 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1635 0f2235638267a8fa832dec1d8bd62e38 87 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 68 1.5E-13 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_1635 0f2235638267a8fa832dec1d8bd62e38 87 Gene3D G3DSA:3.40.1620.40 2 68 4.0E-23 T 15-10-2018 THII_1635 0f2235638267a8fa832dec1d8bd62e38 87 SUPERFAMILY SSF143120 1 69 4.32E-17 T 15-10-2018 IPR036165 YefM-like superfamily THII_0238 0b3366bcd969ecfddd1e865f0618ee46 445 Gene3D G3DSA:1.20.1740.10 9 437 1.4E-26 T 15-10-2018 THII_0238 0b3366bcd969ecfddd1e865f0618ee46 445 Pfam PF13520 Amino acid permease 25 373 1.8E-16 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 THII_0238 0b3366bcd969ecfddd1e865f0618ee46 445 PIRSF PIRSF006060 10 431 4.5E-23 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 THII_3900 b0f4d492660a2daaac2bb5d1b9bd6051 308 Pfam PF12706 Beta-lactamase superfamily domain 66 264 1.0E-11 T 15-10-2018 IPR001279 Metallo-beta-lactamase THII_3900 b0f4d492660a2daaac2bb5d1b9bd6051 308 SMART SM00849 31 221 9.9E-9 T 15-10-2018 IPR001279 Metallo-beta-lactamase THII_3900 b0f4d492660a2daaac2bb5d1b9bd6051 308 Gene3D G3DSA:3.60.15.10 9 308 6.5E-43 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_3900 b0f4d492660a2daaac2bb5d1b9bd6051 308 SUPERFAMILY SSF56281 9 305 7.08E-42 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_0689 4d21db5620899c792efd21904a163684 415 PIRSF PIRSF033563 1 415 3.0E-130 T 15-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 THII_0689 4d21db5620899c792efd21904a163684 415 Pfam PF06245 Protein of unknown function (DUF1015) 4 413 5.2E-128 T 15-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 THII_0450 30d959117d0f1a3f0e21a47b40515ff7 353 SUPERFAMILY SSF54862 237 298 8.58E-14 T 15-10-2018 THII_0450 30d959117d0f1a3f0e21a47b40515ff7 353 Gene3D G3DSA:3.30.70.20 243 301 1.5E-11 T 15-10-2018 THII_0450 30d959117d0f1a3f0e21a47b40515ff7 353 Pfam PF13187 4Fe-4S dicluster domain 32 74 1.3E-7 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0450 30d959117d0f1a3f0e21a47b40515ff7 353 SUPERFAMILY SSF54862 13 85 3.71E-15 T 15-10-2018 THII_0450 30d959117d0f1a3f0e21a47b40515ff7 353 Pfam PF12838 4Fe-4S dicluster domain 249 293 6.9E-7 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0450 30d959117d0f1a3f0e21a47b40515ff7 353 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 59 70 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0450 30d959117d0f1a3f0e21a47b40515ff7 353 Gene3D G3DSA:3.30.70.20 13 92 1.1E-12 T 15-10-2018 THII_3673 8f4c3febdaea2d2f43a6b5e0ce043b3c 146 Pfam PF05099 Tellurite resistance protein TerB 15 131 4.3E-8 T 15-10-2018 IPR007791 Co-chaperone DjlA, N-terminal THII_3673 8f4c3febdaea2d2f43a6b5e0ce043b3c 146 SUPERFAMILY SSF158682 2 140 8.89E-17 T 15-10-2018 IPR029024 TerB-like THII_3673 8f4c3febdaea2d2f43a6b5e0ce043b3c 146 Gene3D G3DSA:1.10.3680.10 7 145 7.4E-17 T 15-10-2018 IPR029024 TerB-like THII_2509 c0a8f3229500af49bce8eeb26cfb1902 254 Gene3D G3DSA:1.10.4080.10 1 242 1.6E-46 T 15-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily THII_2509 c0a8f3229500af49bce8eeb26cfb1902 254 SUPERFAMILY SSF101478 1 233 5.62E-45 T 15-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily THII_2509 c0a8f3229500af49bce8eeb26cfb1902 254 Pfam PF03747 ADP-ribosylglycohydrolase 1 228 1.0E-26 T 15-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 THII_1962 a58001ef820ddc02c1a03012a850d184 335 SUPERFAMILY SSF53659 6 329 1.33E-104 T 15-10-2018 THII_1962 a58001ef820ddc02c1a03012a850d184 335 Gene3D G3DSA:3.40.718.10 1 332 3.0E-119 T 15-10-2018 THII_1962 a58001ef820ddc02c1a03012a850d184 335 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 327 1.1E-120 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 THII_1962 a58001ef820ddc02c1a03012a850d184 335 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 331 34.477 T 15-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 THII_1962 a58001ef820ddc02c1a03012a850d184 335 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 323 7.2E-103 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 THII_2216 65a8ebbfeaf38893b240f882c7d355ee 82 Pfam PF13358 DDE superfamily endonuclease 21 74 4.9E-16 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_2216 65a8ebbfeaf38893b240f882c7d355ee 82 Gene3D G3DSA:3.30.420.470 3 81 7.3E-7 T 15-10-2018 THII_3787 1c72e173fd52289928970f63790899be 124 SUPERFAMILY SSF54427 5 123 6.47E-24 T 15-10-2018 IPR032710 NTF2-like domain superfamily THII_3787 1c72e173fd52289928970f63790899be 124 Gene3D G3DSA:3.10.450.50 1 124 6.8E-28 T 15-10-2018 THII_3787 1c72e173fd52289928970f63790899be 124 Pfam PF12680 SnoaL-like domain 19 117 7.9E-13 T 15-10-2018 IPR037401 SnoaL-like domain THII_0364 742b664ff5b6a2ec03bee9b9a508d8a0 220 Pfam PF08003 Protein of unknown function (DUF1698) 21 197 7.5E-10 T 15-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like THII_0364 742b664ff5b6a2ec03bee9b9a508d8a0 220 Gene3D G3DSA:3.40.50.150 16 207 3.0E-12 T 15-10-2018 THII_0364 742b664ff5b6a2ec03bee9b9a508d8a0 220 SUPERFAMILY SSF53335 21 206 1.7E-15 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1124 6bbe9574361a68ad3d0d90342e771628 357 Gene3D G3DSA:3.40.50.410 136 304 7.2E-6 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_1124 6bbe9574361a68ad3d0d90342e771628 357 SUPERFAMILY SSF53300 135 299 7.42E-8 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_0703 07090017156cd0926fb661f9a14d0e30 105 Pfam PF03306 Alpha-acetolactate decarboxylase 41 91 2.0E-15 T 15-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 THII_0703 07090017156cd0926fb661f9a14d0e30 105 SUPERFAMILY SSF117856 39 90 6.28E-15 T 15-10-2018 THII_0703 07090017156cd0926fb661f9a14d0e30 105 Gene3D G3DSA:3.30.1330.80 35 95 8.2E-20 T 15-10-2018 THII_2069 1f133f5a7d0a02ae6ab846cf2b2ea62c 412 Gene3D G3DSA:1.20.81.30 252 362 4.5E-23 T 15-10-2018 THII_2069 1f133f5a7d0a02ae6ab846cf2b2ea62c 412 Gene3D G3DSA:1.20.81.30 54 163 5.1E-22 T 15-10-2018 THII_2069 1f133f5a7d0a02ae6ab846cf2b2ea62c 412 Pfam PF00482 Type II secretion system (T2SS), protein F 268 390 2.5E-22 T 15-10-2018 IPR018076 Type II secretion system F domain THII_2069 1f133f5a7d0a02ae6ab846cf2b2ea62c 412 Pfam PF00482 Type II secretion system (T2SS), protein F 64 187 1.8E-21 T 15-10-2018 IPR018076 Type II secretion system F domain THII_2069 1f133f5a7d0a02ae6ab846cf2b2ea62c 412 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 2.1E-6 T 15-10-2018 IPR003004 GspF/PilC family THII_2069 1f133f5a7d0a02ae6ab846cf2b2ea62c 412 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 2.1E-6 T 15-10-2018 IPR003004 GspF/PilC family THII_2069 1f133f5a7d0a02ae6ab846cf2b2ea62c 412 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 2.1E-6 T 15-10-2018 IPR003004 GspF/PilC family THII_3517 0a547de52a762c5dd56487370fc38e2c 297 PIRSF PIRSF038471 1 291 9.1E-61 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 THII_3517 0a547de52a762c5dd56487370fc38e2c 297 Pfam PF04085 rod shape-determining protein MreC 131 276 1.2E-31 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 THII_3517 0a547de52a762c5dd56487370fc38e2c 297 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 288 1.8E-46 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 THII_3517 0a547de52a762c5dd56487370fc38e2c 297 Gene3D G3DSA:2.40.10.350 184 264 2.3E-26 T 15-10-2018 THII_3517 0a547de52a762c5dd56487370fc38e2c 297 Gene3D G3DSA:2.40.10.340 133 274 2.3E-26 T 15-10-2018 THII_1305 104f95546c058fb6ea2b3a7c074249e3 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 342 1.9E-61 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 THII_1305 104f95546c058fb6ea2b3a7c074249e3 364 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 342 1.3E-98 T 15-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 THII_1594 b2f4b3f96bece309c4a6079b14409195 202 Pfam PF06271 RDD family 8 181 2.7E-24 T 15-10-2018 IPR010432 RDD THII_1880 634173a177e647726731c52639b4d5e9 317 Gene3D G3DSA:3.40.50.720 9 184 2.5E-53 T 15-10-2018 THII_1880 634173a177e647726731c52639b4d5e9 317 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 185 306 2.8E-24 T 15-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain THII_1880 634173a177e647726731c52639b4d5e9 317 SUPERFAMILY SSF48179 185 308 3.74E-23 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 THII_1880 634173a177e647726731c52639b4d5e9 317 Gene3D G3DSA:1.10.1040.10 185 314 8.1E-36 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 THII_1880 634173a177e647726731c52639b4d5e9 317 Pfam PF02558 Ketopantoate reductase PanE/ApbA 12 157 7.6E-38 T 15-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain THII_1880 634173a177e647726731c52639b4d5e9 317 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 10 310 1.1E-77 T 15-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 THII_1880 634173a177e647726731c52639b4d5e9 317 SUPERFAMILY SSF51735 11 162 2.4E-13 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1986 7af2fe681942b2b6cd61f580939271f0 176 Gene3D G3DSA:2.40.50.180 55 130 4.6E-12 T 15-10-2018 THII_1986 7af2fe681942b2b6cd61f580939271f0 176 Pfam PF01584 CheW-like domain 37 121 6.5E-11 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_1986 7af2fe681942b2b6cd61f580939271f0 176 SUPERFAMILY SSF50341 31 164 3.01E-16 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_2862 5bbda00ac4ea5c42b3ca9d490775bac8 145 Pfam PF01724 Domain of unknown function DUF29 5 142 3.4E-52 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2862 5bbda00ac4ea5c42b3ca9d490775bac8 145 Gene3D G3DSA:1.20.1220.20 1 144 7.2E-35 T 15-10-2018 THII_1969 eb92904d42b764079f5ae7b5a78a8c00 320 SMART SM00382 31 212 7.5E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1969 eb92904d42b764079f5ae7b5a78a8c00 320 Gene3D G3DSA:3.40.50.300 1 236 4.3E-58 T 15-10-2018 THII_1969 eb92904d42b764079f5ae7b5a78a8c00 320 SUPERFAMILY SSF52540 4 228 1.89E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1969 eb92904d42b764079f5ae7b5a78a8c00 320 Pfam PF00005 ABC transporter 23 165 3.2E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_0408 b9c4d565969099c86a0d9f3cb120a7de 268 SUPERFAMILY SSF53335 18 235 4.8E-40 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0408 b9c4d565969099c86a0d9f3cb120a7de 268 Pfam PF05050 Methyltransferase FkbM domain 70 227 3.4E-21 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_0408 b9c4d565969099c86a0d9f3cb120a7de 268 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 68 203 8.8E-25 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_0408 b9c4d565969099c86a0d9f3cb120a7de 268 Gene3D G3DSA:3.40.50.150 58 233 4.9E-29 T 15-10-2018 THII_2298 8960da644e95795d6100b17b636cb31f 597 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 110 225 3.4E-12 T 15-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like THII_0202 8e574cffc85f29e7ad0c198d8b2bc98a 186 Pfam PF00156 Phosphoribosyl transferase domain 18 171 5.7E-22 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 THII_0202 8e574cffc85f29e7ad0c198d8b2bc98a 186 Gene3D G3DSA:3.40.50.2020 4 185 3.0E-51 T 15-10-2018 THII_0202 8e574cffc85f29e7ad0c198d8b2bc98a 186 SUPERFAMILY SSF53271 16 183 5.64E-43 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like THII_0844 cb8fdc80b4af988558f6d119a1bd18c3 204 Pfam PF13649 Methyltransferase domain 44 135 1.2E-8 T 15-10-2018 THII_0844 cb8fdc80b4af988558f6d119a1bd18c3 204 Gene3D G3DSA:3.40.50.150 4 198 4.9E-20 T 15-10-2018 THII_0844 cb8fdc80b4af988558f6d119a1bd18c3 204 SUPERFAMILY SSF53335 5 200 3.97E-22 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0528 01054dde25ca1d3ac3b555e0870bf8d8 832 Gene3D G3DSA:3.40.630.30 10 187 7.3E-21 T 15-10-2018 THII_0528 01054dde25ca1d3ac3b555e0870bf8d8 832 PRINTS PR01228 Eggshell protein signature 547 565 5.0E-6 T 15-10-2018 THII_0528 01054dde25ca1d3ac3b555e0870bf8d8 832 PRINTS PR01228 Eggshell protein signature 396 407 5.0E-6 T 15-10-2018 THII_0528 01054dde25ca1d3ac3b555e0870bf8d8 832 PRINTS PR01228 Eggshell protein signature 478 493 5.0E-6 T 15-10-2018 THII_0528 01054dde25ca1d3ac3b555e0870bf8d8 832 PRINTS PR01228 Eggshell protein signature 506 516 5.0E-6 T 15-10-2018 THII_0528 01054dde25ca1d3ac3b555e0870bf8d8 832 SUPERFAMILY SSF55729 11 184 8.49E-21 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_0528 01054dde25ca1d3ac3b555e0870bf8d8 832 Pfam PF13302 Acetyltransferase (GNAT) domain 17 153 1.5E-11 T 15-10-2018 IPR000182 GNAT domain THII_0528 01054dde25ca1d3ac3b555e0870bf8d8 832 Gene3D G3DSA:2.60.40.10 647 729 6.0E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2038 80e04a2a436588c543fe0dbba6e89608 85 SUPERFAMILY SSF143880 12 81 8.89E-12 T 15-10-2018 IPR036782 NE0471-like, N-terminal THII_2038 80e04a2a436588c543fe0dbba6e89608 85 Pfam PF10387 Protein of unknown function (DUF2442) 14 83 3.8E-13 T 15-10-2018 IPR018841 Protein of unknown function DUF2442 THII_0849 fe03870df043e7d3df4b44908c4ab0c1 107 Pfam PF11743 Protein of unknown function (DUF3301) 5 97 2.1E-29 T 15-10-2018 IPR021732 Protein of unknown function DUF3301 THII_0802 772c158f4e3671a8c0e58a290306a6dd 141 Gene3D G3DSA:3.40.50.2300 1 134 1.1E-27 T 15-10-2018 THII_0802 772c158f4e3671a8c0e58a290306a6dd 141 SUPERFAMILY SSF52172 7 126 5.27E-27 T 15-10-2018 IPR011006 CheY-like superfamily THII_0802 772c158f4e3671a8c0e58a290306a6dd 141 SMART SM00448 8 120 5.7E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_0802 772c158f4e3671a8c0e58a290306a6dd 141 Pfam PF00072 Response regulator receiver domain 11 120 2.8E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1108 2db43a41a552b3b8d3dc1716bcba0734 266 Pfam PF01223 DNA/RNA non-specific endonuclease 55 247 1.1E-43 T 15-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 THII_1108 2db43a41a552b3b8d3dc1716bcba0734 266 SMART SM00477 59 250 1.4E-42 T 15-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 THII_1108 2db43a41a552b3b8d3dc1716bcba0734 266 SUPERFAMILY SSF54060 50 249 3.06E-56 T 15-10-2018 THII_1108 2db43a41a552b3b8d3dc1716bcba0734 266 SMART SM00892 58 250 2.5E-45 T 15-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 THII_1108 2db43a41a552b3b8d3dc1716bcba0734 266 Gene3D G3DSA:3.40.570.10 31 263 7.5E-57 T 15-10-2018 THII_3530 29eae038b4e9bc02cc87946c3d600f07 456 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 268 292 1.2E-5 T 15-10-2018 THII_3530 29eae038b4e9bc02cc87946c3d600f07 456 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 164 178 1.2E-5 T 15-10-2018 THII_3530 29eae038b4e9bc02cc87946c3d600f07 456 SUPERFAMILY SSF53335 6 427 5.45E-67 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3530 29eae038b4e9bc02cc87946c3d600f07 456 Gene3D G3DSA:1.20.1260.30 2 141 4.1E-21 T 15-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily THII_3530 29eae038b4e9bc02cc87946c3d600f07 456 Gene3D G3DSA:3.40.50.150 145 424 4.5E-37 T 15-10-2018 THII_3530 29eae038b4e9bc02cc87946c3d600f07 456 Pfam PF02384 N-6 DNA Methylase 121 384 1.6E-41 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 THII_1324 0836b5448a41f741d6ee414076b5a9f0 669 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 512 540 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 THII_1324 0836b5448a41f741d6ee414076b5a9f0 669 Gene3D G3DSA:1.25.20.10 31 391 2.1E-108 T 15-10-2018 THII_1324 0836b5448a41f741d6ee414076b5a9f0 669 Pfam PF14718 Soluble lytic murein transglycosylase L domain 435 483 3.1E-13 T 15-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 THII_1324 0836b5448a41f741d6ee414076b5a9f0 669 Pfam PF01464 Transglycosylase SLT domain 498 603 3.7E-25 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 THII_1324 0836b5448a41f741d6ee414076b5a9f0 669 SUPERFAMILY SSF48435 32 488 8.76E-111 T 15-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 THII_1324 0836b5448a41f741d6ee414076b5a9f0 669 Gene3D G3DSA:1.10.530.10 484 648 4.1E-45 T 15-10-2018 THII_1324 0836b5448a41f741d6ee414076b5a9f0 669 SUPERFAMILY SSF53955 490 646 2.53E-44 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily THII_0333 5392aff9d7cbf7f54abd6bb4f3c05849 147 Pfam PF12729 Four helix bundle sensory module for signal transduction 18 138 5.0E-9 T 15-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain THII_0234 1efc5b96c1249922580fa00ed6d0779c 817 Gene3D G3DSA:3.40.640.10 56 302 1.4E-115 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_0234 1efc5b96c1249922580fa00ed6d0779c 817 SUPERFAMILY SSF53383 19 414 1.27E-112 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_0234 1efc5b96c1249922580fa00ed6d0779c 817 SUPERFAMILY SSF51735 601 724 5.13E-8 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0234 1efc5b96c1249922580fa00ed6d0779c 817 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 618 696 4.2E-5 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 THII_0234 1efc5b96c1249922580fa00ed6d0779c 817 Gene3D G3DSA:3.90.1150.10 24 407 1.4E-115 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_0234 1efc5b96c1249922580fa00ed6d0779c 817 Gene3D G3DSA:3.40.50.720 596 735 1.3E-9 T 15-10-2018 THII_0234 1efc5b96c1249922580fa00ed6d0779c 817 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 219 256 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 THII_0234 1efc5b96c1249922580fa00ed6d0779c 817 Pfam PF00202 Aminotransferase class-III 23 413 2.4E-99 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 THII_1186 83d58c0ab66d23bec0e59086a23e2711 752 Gene3D G3DSA:2.60.40.10 142 270 2.8E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1186 83d58c0ab66d23bec0e59086a23e2711 752 SUPERFAMILY SSF81296 168 270 4.2E-6 T 15-10-2018 IPR014756 Immunoglobulin E-set THII_1186 83d58c0ab66d23bec0e59086a23e2711 752 SUPERFAMILY SSF75011 539 739 3.79E-13 T 15-10-2018 THII_1132 4233b2a5b69158a0c2199540c00edacb 220 SUPERFAMILY SSF53474 7 217 9.34E-48 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1132 4233b2a5b69158a0c2199540c00edacb 220 Gene3D G3DSA:3.40.50.1820 1 220 2.4E-65 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1132 4233b2a5b69158a0c2199540c00edacb 220 Pfam PF02230 Phospholipase/Carboxylesterase 4 217 8.9E-55 T 15-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 THII_1174 7711aedc1436cb5a581c29c1a649ef96 401 Pfam PF00155 Aminotransferase class I and II 32 378 2.7E-46 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 THII_1174 7711aedc1436cb5a581c29c1a649ef96 401 Gene3D G3DSA:3.90.1150.10 13 383 3.6E-113 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_1174 7711aedc1436cb5a581c29c1a649ef96 401 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 397 1.1E-192 T 15-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 THII_1174 7711aedc1436cb5a581c29c1a649ef96 401 Gene3D G3DSA:3.40.640.10 43 294 3.6E-113 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_1174 7711aedc1436cb5a581c29c1a649ef96 401 SUPERFAMILY SSF53383 3 398 9.9E-86 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 6 415 1.2E-191 T 15-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 Gene3D G3DSA:3.10.580.10 454 586 1.0E-28 T 15-10-2018 THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 Pfam PF00571 CBS domain 530 580 4.7E-9 T 15-10-2018 IPR000644 CBS domain THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 Pfam PF00571 CBS domain 461 515 1.5E-5 T 15-10-2018 IPR000644 CBS domain THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 SMART SM01329 30 411 1.9E-166 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 302 321 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 SUPERFAMILY SSF53659 5 415 1.08E-134 T 15-10-2018 THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 Gene3D G3DSA:3.40.718.10 1 416 2.4E-164 T 15-10-2018 THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 SMART SM00116 535 582 4.0E-5 T 15-10-2018 IPR000644 CBS domain THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 SMART SM00116 468 517 2.0 T 15-10-2018 IPR000644 CBS domain THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 33 410 1.4E-101 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 THII_3572 a6ebcd06589b2e14c97ea02b6f494978 591 SUPERFAMILY SSF54631 458 581 4.42E-25 T 15-10-2018 THII_1632 0e12f1b2d3351c4c6c88e02ce16176f1 369 SUPERFAMILY SSF55073 169 354 4.71E-54 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1632 0e12f1b2d3351c4c6c88e02ce16176f1 369 SMART SM00044 139 343 5.3E-21 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_1632 0e12f1b2d3351c4c6c88e02ce16176f1 369 Gene3D G3DSA:3.30.70.1230 164 365 1.7E-58 T 15-10-2018 IPR029787 Nucleotide cyclase THII_1632 0e12f1b2d3351c4c6c88e02ce16176f1 369 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 174 353 6.1E-34 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 THII_3659 da44a80b3863e4262d8aa15fa82a47a3 182 Pfam PF00929 Exonuclease 9 169 8.0E-28 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_3659 da44a80b3863e4262d8aa15fa82a47a3 182 SMART SM00479 7 179 2.6E-15 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III THII_3659 da44a80b3863e4262d8aa15fa82a47a3 182 SUPERFAMILY SSF53098 1 179 1.45E-43 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_3659 da44a80b3863e4262d8aa15fa82a47a3 182 Gene3D G3DSA:3.30.420.10 1 180 2.2E-68 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 THII_3659 da44a80b3863e4262d8aa15fa82a47a3 182 Hamap MF_00045 Oligoribonuclease [orn]. 3 180 41.152 T 15-10-2018 IPR022894 Oligoribonuclease GO:0000175 THII_2762 625d9f1c12cba7ca9b88179c8972d92a 505 SUPERFAMILY SSF52467 330 503 9.35E-71 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily THII_2762 625d9f1c12cba7ca9b88179c8972d92a 505 PIRSF PIRSF000204 47 504 2.3E-162 T 15-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 THII_2762 625d9f1c12cba7ca9b88179c8972d92a 505 Pfam PF02233 NAD(P) transhydrogenase beta subunit 55 500 8.1E-175 T 15-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 THII_2762 625d9f1c12cba7ca9b88179c8972d92a 505 Gene3D G3DSA:3.40.50.1220 320 505 2.4E-81 T 15-10-2018 THII_1344 091c56f293442650bbb2e4195eea7272 185 Pfam PF05685 Putative restriction endonuclease 12 170 6.6E-29 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1344 091c56f293442650bbb2e4195eea7272 185 SUPERFAMILY SSF52980 7 154 3.59E-18 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1344 091c56f293442650bbb2e4195eea7272 185 Gene3D G3DSA:3.90.1570.10 4 184 1.6E-15 T 15-10-2018 THII_0019 c3aa7b32611b74e0ce3c17c8958f3be0 202 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 96 6.3E-9 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 THII_0019 c3aa7b32611b74e0ce3c17c8958f3be0 202 Gene3D G3DSA:1.20.120.1760 8 196 3.5E-22 T 15-10-2018 THII_0100 488b0f607628a4cb4b3aaf3c625bbd59 170 Gene3D G3DSA:1.20.1260.10 15 167 4.8E-21 T 15-10-2018 IPR012347 Ferritin-like THII_0100 488b0f607628a4cb4b3aaf3c625bbd59 170 SUPERFAMILY SSF47240 23 168 4.47E-21 T 15-10-2018 IPR009078 Ferritin-like superfamily THII_0100 488b0f607628a4cb4b3aaf3c625bbd59 170 Pfam PF02915 Rubrerythrin 25 161 1.3E-11 T 15-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 THII_0666 8a4e812648a6a30404ed6643912f142b 911 Gene3D G3DSA:2.60.120.260 615 757 5.2E-13 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily THII_0666 8a4e812648a6a30404ed6643912f142b 911 Gene3D G3DSA:2.160.20.10 26 122 2.3E-5 T 15-10-2018 IPR012334 Pectin lyase fold THII_0666 8a4e812648a6a30404ed6643912f142b 911 SUPERFAMILY SSF49265 836 909 5.52E-6 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_0666 8a4e812648a6a30404ed6643912f142b 911 SMART SM00710 392 414 9900.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0666 8a4e812648a6a30404ed6643912f142b 911 SMART SM00710 356 381 4200.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0666 8a4e812648a6a30404ed6643912f142b 911 SMART SM00710 511 533 4500.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0666 8a4e812648a6a30404ed6643912f142b 911 SMART SM00710 536 560 3700.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0666 8a4e812648a6a30404ed6643912f142b 911 SMART SM00710 327 349 7300.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0666 8a4e812648a6a30404ed6643912f142b 911 SMART SM00710 305 326 44.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0666 8a4e812648a6a30404ed6643912f142b 911 SMART SM00710 282 304 1400.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0666 8a4e812648a6a30404ed6643912f142b 911 SMART SM00710 415 442 920.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0666 8a4e812648a6a30404ed6643912f142b 911 SMART SM00710 488 510 3.2 T 15-10-2018 IPR006626 Parallel beta-helix repeat THII_0666 8a4e812648a6a30404ed6643912f142b 911 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 488 525 7.3E-5 T 15-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 THII_0666 8a4e812648a6a30404ed6643912f142b 911 Gene3D G3DSA:2.60.40.10 823 910 6.4E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0666 8a4e812648a6a30404ed6643912f142b 911 SUPERFAMILY SSF49785 618 757 8.5E-9 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily THII_0666 8a4e812648a6a30404ed6643912f142b 911 SUPERFAMILY SSF51126 386 686 1.49E-15 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0666 8a4e812648a6a30404ed6643912f142b 911 Gene3D G3DSA:2.160.20.10 276 592 1.8E-15 T 15-10-2018 IPR012334 Pectin lyase fold THII_0666 8a4e812648a6a30404ed6643912f142b 911 Pfam PF13229 Right handed beta helix region 398 570 4.3E-14 T 15-10-2018 IPR039448 Right handed beta helix domain THII_0666 8a4e812648a6a30404ed6643912f142b 911 SUPERFAMILY SSF51126 13 465 1.92E-24 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_3964 007b5ad52542ae8c85a12004ecac1bd2 1881 SUPERFAMILY SSF89372 158 388 1.37E-6 T 15-10-2018 THII_3964 007b5ad52542ae8c85a12004ecac1bd2 1881 Gene3D G3DSA:2.60.40.10 807 914 1.3E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3964 007b5ad52542ae8c85a12004ecac1bd2 1881 Gene3D G3DSA:2.60.40.10 584 686 3.7E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3964 007b5ad52542ae8c85a12004ecac1bd2 1881 SMART SM00706 299 337 110.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_3964 007b5ad52542ae8c85a12004ecac1bd2 1881 SMART SM00706 24 59 200.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_3964 007b5ad52542ae8c85a12004ecac1bd2 1881 SMART SM00706 104 142 18.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_3964 007b5ad52542ae8c85a12004ecac1bd2 1881 SMART SM00706 143 180 160.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_3964 007b5ad52542ae8c85a12004ecac1bd2 1881 SMART SM00706 260 298 5.2 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_3964 007b5ad52542ae8c85a12004ecac1bd2 1881 SMART SM00706 181 218 20.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_3964 007b5ad52542ae8c85a12004ecac1bd2 1881 SMART SM00706 377 415 120.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 SUPERFAMILY SSF103647 174 269 1.96E-23 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 SUPERFAMILY SSF103647 543 611 1.06E-16 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 SUPERFAMILY SSF103647 475 557 8.89E-21 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Gene3D G3DSA:4.10.1080.10 396 479 2.0E-26 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Gene3D G3DSA:4.10.1080.10 539 618 3.0E-25 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Gene3D G3DSA:4.10.1080.10 159 261 2.0E-26 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Gene3D G3DSA:4.10.1080.10 321 395 7.2E-26 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 382 418 1.3E-11 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 528 562 1.8E-11 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 310 344 1.9E-9 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 203 236 2.5E-8 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 492 526 3.8E-10 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 346 380 4.5E-10 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 420 454 5.6E-9 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 564 598 1.4E-11 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 274 308 6.3E-10 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 456 490 4.3E-9 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 238 272 1.9E-9 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 Pfam PF02412 Thrombospondin type 3 repeat 172 200 7.8E-7 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3064 fb696e172ebf50fa7fa73ea88d1ebb33 718 SUPERFAMILY SSF103647 370 486 2.16E-32 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_2220 50141c3c7e59f74f9571487db98e9d9e 251 Gene3D G3DSA:3.90.226.10 1 251 6.8E-66 T 15-10-2018 THII_2220 50141c3c7e59f74f9571487db98e9d9e 251 SUPERFAMILY SSF52096 1 248 3.51E-39 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_2220 50141c3c7e59f74f9571487db98e9d9e 251 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 250 3.0E-56 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 THII_2393 10aa1ceb09d2885ee0714d7828a42b07 328 PIRSF PIRSF005651 1 300 1.8E-88 T 15-10-2018 IPR010200 HflC GO:0016021|GO:0052547 THII_2393 10aa1ceb09d2885ee0714d7828a42b07 328 Pfam PF01145 SPFH domain / Band 7 family 25 210 3.4E-28 T 15-10-2018 IPR001107 Band 7 domain THII_2393 10aa1ceb09d2885ee0714d7828a42b07 328 SUPERFAMILY SSF117892 58 198 3.14E-31 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily THII_2393 10aa1ceb09d2885ee0714d7828a42b07 328 SMART SM00244 20 193 2.5E-31 T 15-10-2018 IPR001107 Band 7 domain THII_2393 10aa1ceb09d2885ee0714d7828a42b07 328 TIGRFAM TIGR01932 hflC: HflC protein 151 292 7.5E-46 T 15-10-2018 IPR010200 HflC GO:0016021|GO:0052547 THII_2393 10aa1ceb09d2885ee0714d7828a42b07 328 Gene3D G3DSA:3.30.479.30 55 195 9.6E-26 T 15-10-2018 THII_2684 ea0899ec9e3bde8a3d67343684051315 237 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 11 197 5.9E-60 T 15-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein THII_2684 ea0899ec9e3bde8a3d67343684051315 237 Gene3D G3DSA:3.20.20.70 10 202 4.8E-37 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2684 ea0899ec9e3bde8a3d67343684051315 237 Pfam PF13353 4Fe-4S single cluster domain 27 108 4.5E-10 T 15-10-2018 THII_2684 ea0899ec9e3bde8a3d67343684051315 237 Pfam PF04055 Radical SAM superfamily 31 171 8.1E-17 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_2684 ea0899ec9e3bde8a3d67343684051315 237 SUPERFAMILY SSF102114 31 213 1.96E-27 T 15-10-2018 THII_2591 8b9f9ab6ca5b8f24852ab6fec80d71cc 188 Pfam PF13274 Protein of unknown function (DUF4065) 32 140 3.3E-18 T 15-10-2018 IPR025272 Domain of unknown function DUF4065 THII_1159 9712423c71fe9d2c188a210b78529597 91 Pfam PF04380 Membrane fusogenic activity 2 78 1.5E-23 T 15-10-2018 IPR007475 Membrane fusogenic activity THII_3891 28b367baaa90764b1b6ef8ffc0e77972 361 SUPERFAMILY SSF117892 60 194 1.28E-43 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily THII_3891 28b367baaa90764b1b6ef8ffc0e77972 361 PRINTS PR00721 Stomatin signature 119 136 1.4E-30 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_3891 28b367baaa90764b1b6ef8ffc0e77972 361 PRINTS PR00721 Stomatin signature 163 181 1.4E-30 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_3891 28b367baaa90764b1b6ef8ffc0e77972 361 PRINTS PR00721 Stomatin signature 182 203 1.4E-30 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_3891 28b367baaa90764b1b6ef8ffc0e77972 361 PRINTS PR00721 Stomatin signature 139 162 1.4E-30 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_3891 28b367baaa90764b1b6ef8ffc0e77972 361 PRINTS PR00721 Stomatin signature 84 105 1.4E-30 T 15-10-2018 IPR001972 Stomatin family GO:0016020 THII_3891 28b367baaa90764b1b6ef8ffc0e77972 361 SMART SM00244 29 187 2.5E-57 T 15-10-2018 IPR001107 Band 7 domain THII_3891 28b367baaa90764b1b6ef8ffc0e77972 361 Gene3D G3DSA:3.30.479.30 57 189 8.5E-45 T 15-10-2018 THII_3891 28b367baaa90764b1b6ef8ffc0e77972 361 Pfam PF01145 SPFH domain / Band 7 family 34 203 2.7E-37 T 15-10-2018 IPR001107 Band 7 domain THII_3891 28b367baaa90764b1b6ef8ffc0e77972 361 ProSitePatterns PS01270 Band 7 protein family signature. 143 171 - T 15-10-2018 IPR018080 Band 7/stomatin-like, conserved site THII_2916 ce8a2636e9830f0c798e7371ed405fc1 109 SUPERFAMILY SSF141091 1 102 5.49E-37 T 15-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2916 ce8a2636e9830f0c798e7371ed405fc1 109 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 5.2E-40 T 15-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2916 ce8a2636e9830f0c798e7371ed405fc1 109 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 15-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_2916 ce8a2636e9830f0c798e7371ed405fc1 109 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.982 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_2916 ce8a2636e9830f0c798e7371ed405fc1 109 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 4.4E-39 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1870 06b7dd71089f17b80eaabf4af1cc27f7 261 TIGRFAM TIGR00444 mazG: MazG family protein 19 257 2.4E-63 T 15-10-2018 IPR011551 NTP pyrophosphohydrolase MazG THII_1870 06b7dd71089f17b80eaabf4af1cc27f7 261 SUPERFAMILY SSF101386 12 106 4.49E-13 T 15-10-2018 THII_1870 06b7dd71089f17b80eaabf4af1cc27f7 261 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 165 226 1.2E-5 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core THII_1870 06b7dd71089f17b80eaabf4af1cc27f7 261 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 33 103 3.3E-15 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core THII_1870 06b7dd71089f17b80eaabf4af1cc27f7 261 Gene3D G3DSA:1.10.287.1080 130 260 9.4E-44 T 15-10-2018 THII_1870 06b7dd71089f17b80eaabf4af1cc27f7 261 SUPERFAMILY SSF101386 138 237 4.67E-22 T 15-10-2018 THII_1870 06b7dd71089f17b80eaabf4af1cc27f7 261 Gene3D G3DSA:1.10.287.1080 8 103 3.3E-24 T 15-10-2018 THII_3683 d198502d6892ce317fa148247b4f0689 113 SUPERFAMILY SSF52091 15 92 3.53E-5 T 15-10-2018 IPR036513 STAS domain superfamily THII_2339 a7f5c112ceb9b6707a11750864c56381 109 SMART SM00450 7 102 2.0E-22 T 15-10-2018 IPR001763 Rhodanese-like domain THII_2339 a7f5c112ceb9b6707a11750864c56381 109 SUPERFAMILY SSF52821 3 105 1.24E-32 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily THII_2339 a7f5c112ceb9b6707a11750864c56381 109 Pfam PF00581 Rhodanese-like domain 9 98 5.3E-14 T 15-10-2018 IPR001763 Rhodanese-like domain THII_2339 a7f5c112ceb9b6707a11750864c56381 109 Gene3D G3DSA:3.40.250.10 6 107 1.2E-29 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily THII_0252 2d6e39fc8ca67022e1f5e0301823a990 107 Gene3D G3DSA:3.40.30.10 6 107 2.8E-28 T 15-10-2018 THII_0252 2d6e39fc8ca67022e1f5e0301823a990 107 SUPERFAMILY SSF52833 6 104 6.37E-25 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_0323 277efe43c19a5dd555d526170b128e63 290 Gene3D G3DSA:1.10.760.10 164 283 2.3E-15 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0323 277efe43c19a5dd555d526170b128e63 290 Pfam PF00034 Cytochrome c 192 275 3.1E-4 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0323 277efe43c19a5dd555d526170b128e63 290 SUPERFAMILY SSF46626 183 275 7.81E-14 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0235 144b8bfa54b3c395e108c74a29fd9591 155 SUPERFAMILY SSF88723 5 127 1.05E-9 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_0235 144b8bfa54b3c395e108c74a29fd9591 155 Pfam PF01850 PIN domain 6 116 3.5E-6 T 15-10-2018 IPR002716 PIN domain THII_1278 e2832fb8110dcd0fcdf4d743f1ceb679 363 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 13 356 50.359 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 THII_1278 e2832fb8110dcd0fcdf4d743f1ceb679 363 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 149 165 - T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 THII_1278 e2832fb8110dcd0fcdf4d743f1ceb679 363 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 29 38 - T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 THII_1278 e2832fb8110dcd0fcdf4d743f1ceb679 363 SUPERFAMILY SSF51726 10 357 2.49E-121 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 THII_1278 e2832fb8110dcd0fcdf4d743f1ceb679 363 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 16 353 8.9E-135 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 THII_1278 e2832fb8110dcd0fcdf4d743f1ceb679 363 Gene3D G3DSA:3.20.20.210 2 361 4.1E-157 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 THII_1278 e2832fb8110dcd0fcdf4d743f1ceb679 363 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 12 354 1.0E-137 T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 THII_3911 4bfbbd6996db85e11f40590ed78de081 702 SUPERFAMILY SSF55073 263 421 8.63E-43 T 15-10-2018 IPR029787 Nucleotide cyclase THII_3911 4bfbbd6996db85e11f40590ed78de081 702 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 418 7.3E-36 T 15-10-2018 IPR000160 GGDEF domain THII_3911 4bfbbd6996db85e11f40590ed78de081 702 SMART SM00091 130 196 8.7E-4 T 15-10-2018 IPR000014 PAS domain THII_3911 4bfbbd6996db85e11f40590ed78de081 702 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 412 2.6E-42 T 15-10-2018 IPR000160 GGDEF domain THII_3911 4bfbbd6996db85e11f40590ed78de081 702 Gene3D G3DSA:3.30.450.20 137 255 2.7E-17 T 15-10-2018 THII_3911 4bfbbd6996db85e11f40590ed78de081 702 Gene3D G3DSA:3.30.70.270 256 432 2.9E-53 T 15-10-2018 THII_3911 4bfbbd6996db85e11f40590ed78de081 702 Gene3D G3DSA:3.20.20.450 433 681 6.7E-86 T 15-10-2018 IPR035919 EAL domain superfamily THII_3911 4bfbbd6996db85e11f40590ed78de081 702 Pfam PF00563 EAL domain 436 670 9.8E-61 T 15-10-2018 IPR001633 EAL domain THII_3911 4bfbbd6996db85e11f40590ed78de081 702 SUPERFAMILY SSF52172 1 126 1.72E-7 T 15-10-2018 IPR011006 CheY-like superfamily THII_3911 4bfbbd6996db85e11f40590ed78de081 702 SMART SM00267 247 419 4.2E-48 T 15-10-2018 IPR000160 GGDEF domain THII_3911 4bfbbd6996db85e11f40590ed78de081 702 SUPERFAMILY SSF55785 122 243 1.43E-11 T 15-10-2018 IPR035965 PAS domain superfamily THII_3911 4bfbbd6996db85e11f40590ed78de081 702 SMART SM00052 429 675 7.7E-92 T 15-10-2018 IPR001633 EAL domain THII_3911 4bfbbd6996db85e11f40590ed78de081 702 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 254 2.5E-6 T 15-10-2018 IPR000014 PAS domain THII_3911 4bfbbd6996db85e11f40590ed78de081 702 SUPERFAMILY SSF141868 435 684 1.44E-78 T 15-10-2018 IPR035919 EAL domain superfamily THII_1886 c99a2d8cecfbab7829554b741235d8c5 95 Gene3D G3DSA:3.60.21.40 1 81 1.3E-9 T 15-10-2018 THII_1886 c99a2d8cecfbab7829554b741235d8c5 95 SUPERFAMILY SSF56300 2 68 7.83E-12 T 15-10-2018 THII_1886 c99a2d8cecfbab7829554b741235d8c5 95 Pfam PF00149 Calcineurin-like phosphoesterase 5 62 4.6E-4 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 THII_0621 cfa429eaf7cfa2563ce9ee5ee4d11ddf 246 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 9 36 1.0E-4 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_0621 cfa429eaf7cfa2563ce9ee5ee4d11ddf 246 Pfam PF13247 4Fe-4S dicluster domain 105 201 1.7E-17 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0621 cfa429eaf7cfa2563ce9ee5ee4d11ddf 246 Gene3D G3DSA:3.30.70.20 50 243 6.9E-55 T 15-10-2018 THII_0621 cfa429eaf7cfa2563ce9ee5ee4d11ddf 246 SUPERFAMILY SSF54862 48 244 1.88E-52 T 15-10-2018 THII_0621 cfa429eaf7cfa2563ce9ee5ee4d11ddf 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0621 cfa429eaf7cfa2563ce9ee5ee4d11ddf 246 Gene3D G3DSA:3.30.70.20 115 179 6.9E-55 T 15-10-2018 THII_0790 25e46d32bf82fbc82863ff06f8eefa57 302 Gene3D G3DSA:2.60.120.10 148 302 3.1E-39 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_0790 25e46d32bf82fbc82863ff06f8eefa57 302 SUPERFAMILY SSF51182 6 301 7.43E-60 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily THII_0790 25e46d32bf82fbc82863ff06f8eefa57 302 Gene3D G3DSA:2.60.120.10 54 147 4.6E-23 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_3199 15644476d877cd3733e02d0c6008c62b 158 SUPERFAMILY SSF52980 16 135 1.23E-18 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3199 15644476d877cd3733e02d0c6008c62b 158 Pfam PF05685 Putative restriction endonuclease 16 140 4.6E-14 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3199 15644476d877cd3733e02d0c6008c62b 158 Gene3D G3DSA:3.90.1570.10 4 151 8.7E-18 T 15-10-2018 THII_3711 d5fcbed510066ff6ab4799ead6e133e7 259 Gene3D G3DSA:3.30.420.10 4 212 6.3E-13 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 THII_3711 d5fcbed510066ff6ab4799ead6e133e7 259 SUPERFAMILY SSF53098 2 227 2.28E-29 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_3711 d5fcbed510066ff6ab4799ead6e133e7 259 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 51 254 5.8E-67 T 15-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like THII_1105 c2f7355cd4b47d77d373500c4f720cc5 242 Gene3D G3DSA:3.40.1280.10 74 242 8.3E-50 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THII_1105 c2f7355cd4b47d77d373500c4f720cc5 242 PIRSF PIRSF015601 2 241 1.6E-54 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 THII_1105 c2f7355cd4b47d77d373500c4f720cc5 242 Gene3D G3DSA:2.40.240.20 1 70 6.9E-22 T 15-10-2018 THII_1105 c2f7355cd4b47d77d373500c4f720cc5 242 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 5 239 8.2E-50 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 THII_1105 c2f7355cd4b47d77d373500c4f720cc5 242 Pfam PF04452 RNA methyltransferase 20 236 1.5E-62 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 THII_1105 c2f7355cd4b47d77d373500c4f720cc5 242 SUPERFAMILY SSF88697 3 70 9.77E-16 T 15-10-2018 IPR015947 PUA-like superfamily THII_1105 c2f7355cd4b47d77d373500c4f720cc5 242 SUPERFAMILY SSF75217 75 241 9.81E-44 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases THII_2044 f39c0fa5611e189b978065f861a6211a 864 Pfam PF13148 Protein of unknown function (DUF3987) 390 758 6.7E-57 T 15-10-2018 IPR025048 Protein of unknown function DUF3987) THII_2044 f39c0fa5611e189b978065f861a6211a 864 Pfam PF13362 Toprim domain 207 308 8.4E-7 T 15-10-2018 IPR006171 TOPRIM domain THII_1135 adbc5abee5e97cba388a667a5ce67cbf 213 SUPERFAMILY SSF52980 22 166 1.02E-5 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1135 adbc5abee5e97cba388a667a5ce67cbf 213 Pfam PF05685 Putative restriction endonuclease 28 172 5.5E-16 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0197 0e6298b640c0bf723800325e880d9d6a 63 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 59 17.522 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 THII_0197 0e6298b640c0bf723800325e880d9d6a 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-19 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 THII_0197 0e6298b640c0bf723800325e880d9d6a 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 5.7E-31 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 THII_0197 0e6298b640c0bf723800325e880d9d6a 63 Pfam PF02599 Global regulator protein family 1 53 1.6E-28 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 THII_0197 0e6298b640c0bf723800325e880d9d6a 63 SUPERFAMILY SSF117130 1 54 7.59E-22 T 15-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 THII_0197 0e6298b640c0bf723800325e880d9d6a 63 Gene3D G3DSA:3.30.70.1680 1 58 1.0E-30 T 15-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 THII_3930 cbe5f9985b834582122bec7ed130d0ea 233 PIRSF PIRSF016482 1 218 2.9E-53 T 15-10-2018 IPR007445 Pilus assembly protein, PilO THII_3930 cbe5f9985b834582122bec7ed130d0ea 233 Pfam PF04350 Pilus assembly protein, PilO 49 202 2.5E-43 T 15-10-2018 IPR007445 Pilus assembly protein, PilO THII_3930 cbe5f9985b834582122bec7ed130d0ea 233 Gene3D G3DSA:3.30.70.60 94 211 1.4E-32 T 15-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 THII_0155 e11c81c6d7021e080f4235976bb72c70 100 Gene3D G3DSA:4.10.520.10 1 98 2.4E-37 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 THII_0155 e11c81c6d7021e080f4235976bb72c70 100 Pfam PF00216 Bacterial DNA-binding protein 3 91 3.7E-31 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0155 e11c81c6d7021e080f4235976bb72c70 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 THII_0155 e11c81c6d7021e080f4235976bb72c70 100 SUPERFAMILY SSF47729 3 92 1.41E-31 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 THII_0155 e11c81c6d7021e080f4235976bb72c70 100 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.0E-16 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0155 e11c81c6d7021e080f4235976bb72c70 100 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.0E-16 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0155 e11c81c6d7021e080f4235976bb72c70 100 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.0E-16 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0155 e11c81c6d7021e080f4235976bb72c70 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.764 T 15-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 THII_0155 e11c81c6d7021e080f4235976bb72c70 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 2.2E-50 T 15-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 THII_0155 e11c81c6d7021e080f4235976bb72c70 100 SMART SM00411 3 92 3.3E-40 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_1167 62bb5d488d39c95a3470b8b668b8b9e5 432 Gene3D G3DSA:3.40.190.10 28 299 1.2E-33 T 15-10-2018 THII_1167 62bb5d488d39c95a3470b8b668b8b9e5 432 Gene3D G3DSA:3.40.190.10 128 244 1.2E-33 T 15-10-2018 THII_1167 62bb5d488d39c95a3470b8b668b8b9e5 432 SUPERFAMILY SSF53850 21 311 1.14E-39 T 15-10-2018 THII_1167 62bb5d488d39c95a3470b8b668b8b9e5 432 Pfam PF13343 Bacterial extracellular solute-binding protein 102 279 8.1E-23 T 15-10-2018 THII_3003 4375c5eb4c40c1089d39da6bab3e1df4 70 SUPERFAMILY SSF143100 6 57 3.14E-9 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like THII_1066 71a652414822683c485053f689ebdb00 148 Pfam PF01724 Domain of unknown function DUF29 8 144 2.5E-53 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1066 71a652414822683c485053f689ebdb00 148 Gene3D G3DSA:1.20.1220.20 2 147 2.0E-30 T 15-10-2018 THII_3657 0bfd1155f6588d6cec7b7daf530aad92 130 SUPERFAMILY SSF46626 18 119 2.58E-9 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1519 63ae03cac5443502f09fb1003ad0e525 70 SUPERFAMILY SSF143100 11 56 8.24E-9 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like THII_1519 63ae03cac5443502f09fb1003ad0e525 70 Gene3D G3DSA:3.30.160.250 8 64 5.3E-6 T 15-10-2018 THII_3636 15793f3d4ff32e3ea5173d2a7e4fba93 140 SUPERFAMILY SSF88723 34 129 1.08E-6 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_3326 8ff8bd2fc89796f3eb851c7a35cd1be3 280 Gene3D G3DSA:3.40.470.10 81 247 4.3E-9 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_3326 8ff8bd2fc89796f3eb851c7a35cd1be3 280 Pfam PF03167 Uracil DNA glycosylase superfamily 144 237 8.2E-7 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_3326 8ff8bd2fc89796f3eb851c7a35cd1be3 280 SUPERFAMILY SSF52141 155 235 5.56E-6 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 THII_0069 12e7746352de8a49373e46f72fe51a9d 372 SUPERFAMILY SSF51569 1 362 5.13E-70 T 15-10-2018 THII_0069 12e7746352de8a49373e46f72fe51a9d 372 Gene3D G3DSA:3.30.70.1140 1 84 1.2E-10 T 15-10-2018 THII_0069 12e7746352de8a49373e46f72fe51a9d 372 Gene3D G3DSA:3.20.20.70 85 358 1.9E-66 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0069 12e7746352de8a49373e46f72fe51a9d 372 Pfam PF00793 DAHP synthetase I family 100 354 2.9E-39 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 THII_1070 66e25445417bbcc3d097821167bbee03 189 Gene3D G3DSA:3.40.50.150 3 188 3.2E-30 T 15-10-2018 THII_1070 66e25445417bbcc3d097821167bbee03 189 SUPERFAMILY SSF53335 10 170 3.47E-29 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1070 66e25445417bbcc3d097821167bbee03 189 Pfam PF08241 Methyltransferase domain 55 151 1.2E-18 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 THII_1384 ce4b39813d9df24ed23e925b1613d9f4 335 SUPERFAMILY SSF53448 7 239 5.81E-29 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1384 ce4b39813d9df24ed23e925b1613d9f4 335 Gene3D G3DSA:3.90.550.10 1 244 5.5E-25 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1384 ce4b39813d9df24ed23e925b1613d9f4 335 Pfam PF00535 Glycosyl transferase family 2 10 158 1.5E-25 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_2291 d261e6fcbb13539e221d5dcdf3ae27fb 194 Pfam PF01063 Amino-transferase class IV 93 188 1.6E-14 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 THII_2291 d261e6fcbb13539e221d5dcdf3ae27fb 194 Gene3D G3DSA:3.20.10.10 77 183 1.3E-27 T 15-10-2018 THII_2291 d261e6fcbb13539e221d5dcdf3ae27fb 194 SUPERFAMILY SSF56752 4 187 1.23E-24 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 THII_2291 d261e6fcbb13539e221d5dcdf3ae27fb 194 Gene3D G3DSA:3.30.470.10 2 76 2.3E-12 T 15-10-2018 THII_2471 2ad7bd42804ee2298e28af27068255c9 236 Pfam PF04012 PspA/IM30 family 3 228 1.2E-41 T 15-10-2018 IPR007157 PspA/IM30 THII_3321 df8a4d1d0f271c76168ce0fa92278916 550 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 538 4.9E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 THII_3321 df8a4d1d0f271c76168ce0fa92278916 550 Gene3D G3DSA:1.10.3720.10 295 541 2.7E-31 T 15-10-2018 IPR035906 MetI-like superfamily THII_3321 df8a4d1d0f271c76168ce0fa92278916 550 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 281 540 8.1E-75 T 15-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 THII_3321 df8a4d1d0f271c76168ce0fa92278916 550 SUPERFAMILY SSF161098 261 530 5.36E-37 T 15-10-2018 IPR035906 MetI-like superfamily THII_2321 93e30201d1ecc7fda1a1ff294bbfc76d 255 Gene3D G3DSA:1.10.760.10 37 97 3.8E-8 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_2321 93e30201d1ecc7fda1a1ff294bbfc76d 255 SUPERFAMILY SSF46626 39 104 1.06E-6 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_3442 bffb03b1bcf79f5a878e011f4c17fc73 351 Pfam PF03235 Protein of unknown function DUF262 29 100 3.6E-17 T 15-10-2018 IPR004919 Domain of unknown function DUF262 THII_2263 26ae91b5e92b8dc0f1256e127182d4d5 487 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 306 320 - T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_2263 26ae91b5e92b8dc0f1256e127182d4d5 487 Gene3D G3DSA:3.40.50.300 213 487 2.3E-109 T 15-10-2018 THII_2263 26ae91b5e92b8dc0f1256e127182d4d5 487 SUPERFAMILY SSF52540 88 484 9.58E-99 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2263 26ae91b5e92b8dc0f1256e127182d4d5 487 Gene3D G3DSA:3.30.450.90 82 211 1.4E-45 T 15-10-2018 THII_2263 26ae91b5e92b8dc0f1256e127182d4d5 487 Pfam PF00437 Type II/IV secretion system protein 114 378 1.1E-82 T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_2263 26ae91b5e92b8dc0f1256e127182d4d5 487 SMART SM00382 239 362 2.8E-5 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_1149 044e9ac6d58570659307aade9b731804 137 Pfam PF09086 Domain of unknown function (DUF1924) 40 134 4.2E-37 T 15-10-2018 IPR015170 Protein of unknown function DUF1924 THII_1149 044e9ac6d58570659307aade9b731804 137 Gene3D G3DSA:1.10.760.10 22 137 4.5E-41 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1149 044e9ac6d58570659307aade9b731804 137 SUPERFAMILY SSF46626 27 135 5.12E-30 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_3338 9fb3c1c438baab91bbdb0e13239e7a35 353 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 326 8.2E-91 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 THII_3338 9fb3c1c438baab91bbdb0e13239e7a35 353 Gene3D G3DSA:3.20.20.70 1 353 1.4E-146 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3338 9fb3c1c438baab91bbdb0e13239e7a35 353 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 2 348 7.9E-192 T 15-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 THII_3338 9fb3c1c438baab91bbdb0e13239e7a35 353 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 138 149 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 THII_3338 9fb3c1c438baab91bbdb0e13239e7a35 353 SUPERFAMILY SSF51569 1 327 4.69E-106 T 15-10-2018 THII_3338 9fb3c1c438baab91bbdb0e13239e7a35 353 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 71 84 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 THII_3338 9fb3c1c438baab91bbdb0e13239e7a35 353 PIRSF PIRSF001359 1 328 4.8E-81 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 THII_3338 9fb3c1c438baab91bbdb0e13239e7a35 353 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 327 2.9E-96 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 THII_0569 3e9a2c2844c7ea8bb0a2807ca539a43d 227 Pfam PF17262 Family of unknown function (DUF5328) 79 225 6.6E-28 T 15-10-2018 IPR020209 Cas6b, C-terminal domain THII_0569 3e9a2c2844c7ea8bb0a2807ca539a43d 227 ProDom PD089226 MA1928 MM0560 MJ0978 109 225 2.0E-8 T 15-10-2018 IPR020209 Cas6b, C-terminal domain THII_3520 3de3ef8ea1cd5167fe436f5fcaf24104 484 Pfam PF01425 Amidase 22 463 1.1E-154 T 15-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 THII_3520 3de3ef8ea1cd5167fe436f5fcaf24104 484 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 474 90.249 T 15-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 THII_3520 3de3ef8ea1cd5167fe436f5fcaf24104 484 Gene3D G3DSA:3.90.1300.10 1 483 3.2E-200 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 THII_3520 3de3ef8ea1cd5167fe436f5fcaf24104 484 SUPERFAMILY SSF75304 2 481 1.57E-165 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 THII_3520 3de3ef8ea1cd5167fe436f5fcaf24104 484 ProSitePatterns PS00571 Amidases signature. 149 180 - T 15-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 THII_3520 3de3ef8ea1cd5167fe436f5fcaf24104 484 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 10 473 2.5E-182 T 15-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 THII_2882 2e5a6f613742f8f560f58021e66ca504 384 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 25 377 2.1E-192 T 15-10-2018 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ THII_2882 2e5a6f613742f8f560f58021e66ca504 384 Gene3D G3DSA:3.20.20.70 27 302 9.7E-51 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2882 2e5a6f613742f8f560f58021e66ca504 384 SMART SM00729 26 220 0.0029 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_2882 2e5a6f613742f8f560f58021e66ca504 384 Pfam PF13353 4Fe-4S single cluster domain 29 137 5.5E-9 T 15-10-2018 THII_2882 2e5a6f613742f8f560f58021e66ca504 384 Pfam PF04055 Radical SAM superfamily 32 185 1.3E-19 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_2882 2e5a6f613742f8f560f58021e66ca504 384 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 284 370 1.5E-7 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain THII_2882 2e5a6f613742f8f560f58021e66ca504 384 PIRSF PIRSF037420 17 384 2.0E-137 T 15-10-2018 IPR017200 Coenzyme PQQ synthesis protein E THII_2882 2e5a6f613742f8f560f58021e66ca504 384 SUPERFAMILY SSF102114 19 350 2.09E-70 T 15-10-2018 THII_1545 637503b4d6e653935cde6f46f248b17e 489 SUPERFAMILY SSF52096 253 428 1.82E-35 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_1545 637503b4d6e653935cde6f46f248b17e 489 Gene3D G3DSA:3.90.226.10 231 429 1.7E-38 T 15-10-2018 THII_1545 637503b4d6e653935cde6f46f248b17e 489 Pfam PF00574 Clp protease 255 426 1.2E-20 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA THII_2756 c82c7beb802e53dac90dc5c6d0288736 158 SUPERFAMILY SSF52121 4 154 1.96E-59 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_2756 c82c7beb802e53dac90dc5c6d0288736 158 Gene3D G3DSA:3.40.50.960 2 155 1.1E-60 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_2756 c82c7beb802e53dac90dc5c6d0288736 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 30.795 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_2756 c82c7beb802e53dac90dc5c6d0288736 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 150 2.8E-52 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_2756 c82c7beb802e53dac90dc5c6d0288736 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 151 1.3E-57 T 15-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 THII_3651 e861ca39fee0283f21967b295be850cf 465 Gene3D G3DSA:3.90.70.10 25 277 1.6E-48 T 15-10-2018 THII_3651 e861ca39fee0283f21967b295be850cf 465 Pfam PF00112 Papain family cysteine protease 123 268 1.8E-9 T 15-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 THII_3651 e861ca39fee0283f21967b295be850cf 465 SMART SM00645 55 278 0.0071 T 15-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 THII_3651 e861ca39fee0283f21967b295be850cf 465 Pfam PF14326 Domain of unknown function (DUF4384) 323 398 1.4E-7 T 15-10-2018 IPR025493 Domain of unknown function DUF4384 THII_3651 e861ca39fee0283f21967b295be850cf 465 SUPERFAMILY SSF54001 49 274 1.97E-28 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily THII_0026 a2b921c8997046a528ff8809ce834d18 208 Pfam PF13247 4Fe-4S dicluster domain 58 113 2.8E-14 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0026 a2b921c8997046a528ff8809ce834d18 208 Pfam PF13247 4Fe-4S dicluster domain 133 168 4.8E-8 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0026 a2b921c8997046a528ff8809ce834d18 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 96 107 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_0026 a2b921c8997046a528ff8809ce834d18 208 Gene3D G3DSA:3.30.70.20 2 208 1.0E-60 T 15-10-2018 THII_0026 a2b921c8997046a528ff8809ce834d18 208 SUPERFAMILY SSF54862 1 202 1.05E-59 T 15-10-2018 THII_1673 c4272f7cbbe8a0653f516dd4dd2ee9db 1163 SUPERFAMILY SSF50692 917 1087 1.63E-11 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily THII_1673 c4272f7cbbe8a0653f516dd4dd2ee9db 1163 SUPERFAMILY SSF53706 49 714 2.24E-96 T 15-10-2018 THII_1673 c4272f7cbbe8a0653f516dd4dd2ee9db 1163 Pfam PF00384 Molybdopterin oxidoreductase 141 204 2.5E-6 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1673 c4272f7cbbe8a0653f516dd4dd2ee9db 1163 Pfam PF00384 Molybdopterin oxidoreductase 272 736 2.2E-27 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0739 48dd4995746df67e71e74c406f4d834e 387 SUPERFAMILY SSF53383 11 385 1.61E-116 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_0739 48dd4995746df67e71e74c406f4d834e 387 PIRSF PIRSF000390 7 387 2.5E-115 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_0739 48dd4995746df67e71e74c406f4d834e 387 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 20 379 5.0E-121 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_0739 48dd4995746df67e71e74c406f4d834e 387 Gene3D G3DSA:3.90.1150.10 261 387 1.3E-32 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_0739 48dd4995746df67e71e74c406f4d834e 387 Gene3D G3DSA:3.40.640.10 3 260 5.3E-97 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_0896 3a7115bd3cd1a2329044cadcae3cb593 142 Gene3D G3DSA:1.20.1220.20 12 142 1.4E-13 T 15-10-2018 THII_0896 3a7115bd3cd1a2329044cadcae3cb593 142 Pfam PF01724 Domain of unknown function DUF29 34 134 2.3E-24 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_3206 b20cf6abf06eb29504dfee2a16120a66 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 1.3E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3206 b20cf6abf06eb29504dfee2a16120a66 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.3E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3206 b20cf6abf06eb29504dfee2a16120a66 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 162 1.3E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3206 b20cf6abf06eb29504dfee2a16120a66 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 1.3E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3206 b20cf6abf06eb29504dfee2a16120a66 253 Gene3D G3DSA:3.40.50.1000 6 220 2.0E-70 T 15-10-2018 IPR023214 HAD superfamily THII_3206 b20cf6abf06eb29504dfee2a16120a66 253 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 201 3.5E-15 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 THII_3206 b20cf6abf06eb29504dfee2a16120a66 253 Gene3D G3DSA:1.10.150.240 18 99 2.0E-70 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THII_3206 b20cf6abf06eb29504dfee2a16120a66 253 SUPERFAMILY SSF56784 1 224 2.33E-42 T 15-10-2018 IPR036412 HAD-like superfamily THII_3206 b20cf6abf06eb29504dfee2a16120a66 253 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 200 2.2E-23 T 15-10-2018 THII_1943 12142d4f8e2c3272ee4ec050d81032d4 1349 Pfam PF02538 Hydantoinase B/oxoprolinase 833 1344 1.3E-211 T 15-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 THII_1943 12142d4f8e2c3272ee4ec050d81032d4 1349 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 8 187 7.6E-62 T 15-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 THII_1943 12142d4f8e2c3272ee4ec050d81032d4 1349 Pfam PF01968 Hydantoinase/oxoprolinase 206 493 2.7E-110 T 15-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 THII_0395 66d9014e553f19984bdbdcb7d09770e2 388 SUPERFAMILY SSF53335 22 381 6.02E-98 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0395 66d9014e553f19984bdbdcb7d09770e2 388 Gene3D G3DSA:3.40.50.12710 5 388 4.3E-125 T 15-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 THII_0395 66d9014e553f19984bdbdcb7d09770e2 388 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 82 317 8.2E-53 T 15-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 THII_2224 e3bd2d00d5beb332cc42fef6d42b3240 63 Gene3D G3DSA:3.30.420.470 1 61 2.3E-9 T 15-10-2018 THII_2224 e3bd2d00d5beb332cc42fef6d42b3240 63 Pfam PF13358 DDE superfamily endonuclease 1 55 1.4E-15 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_3754 e3bd2d00d5beb332cc42fef6d42b3240 63 Gene3D G3DSA:3.30.420.470 1 61 2.3E-9 T 15-10-2018 THII_3754 e3bd2d00d5beb332cc42fef6d42b3240 63 Pfam PF13358 DDE superfamily endonuclease 1 55 1.4E-15 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_3214 adb1218af07c50e243a9cbbd61a1d1c8 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 327 489 8.8E-45 T 15-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 THII_3214 adb1218af07c50e243a9cbbd61a1d1c8 507 Pfam PF05683 Fumarase C-terminus 288 489 1.7E-77 T 15-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 THII_3214 adb1218af07c50e243a9cbbd61a1d1c8 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 5.1E-67 T 15-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 THII_3214 adb1218af07c50e243a9cbbd61a1d1c8 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 284 1.3E-102 T 15-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 THII_3214 adb1218af07c50e243a9cbbd61a1d1c8 507 Gene3D G3DSA:3.20.130.10 304 489 6.6E-54 T 15-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 THII_3214 adb1218af07c50e243a9cbbd61a1d1c8 507 PIRSF PIRSF001394 1 505 1.2E-206 T 15-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 THII_3214 adb1218af07c50e243a9cbbd61a1d1c8 507 SUPERFAMILY SSF117457 316 488 1.09E-56 T 15-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 THII_0160 132f07c14daf41b358b16c8c12a22b73 320 Pfam PF07282 Putative transposase DNA-binding domain 237 303 1.7E-9 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal THII_0160 132f07c14daf41b358b16c8c12a22b73 320 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 185 264 3.9E-6 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal THII_0160 132f07c14daf41b358b16c8c12a22b73 320 Pfam PF01385 Probable transposase 103 216 4.4E-9 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 THII_2628 16c1afeca02f49884cc65fca04cec46c 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 3.2E-31 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 THII_2628 16c1afeca02f49884cc65fca04cec46c 66 Gene3D G3DSA:1.10.10.600 1 66 1.2E-28 T 15-10-2018 IPR036762 IscX-like superfamily THII_2628 16c1afeca02f49884cc65fca04cec46c 66 PIRSF PIRSF039003 3 66 2.5E-33 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 THII_2628 16c1afeca02f49884cc65fca04cec46c 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 65 8.2E-34 T 15-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 THII_2628 16c1afeca02f49884cc65fca04cec46c 66 SUPERFAMILY SSF140319 3 64 6.8E-27 T 15-10-2018 IPR036762 IscX-like superfamily THII_3863 327d3015fdb10b71b1892767226660e7 359 Gene3D G3DSA:1.20.1250.20 1 162 1.0E-14 T 15-10-2018 THII_3863 327d3015fdb10b71b1892767226660e7 359 Gene3D G3DSA:1.20.1250.20 167 359 5.6E-42 T 15-10-2018 THII_3863 327d3015fdb10b71b1892767226660e7 359 Pfam PF12832 MFS_1 like family 1 334 3.0E-84 T 15-10-2018 IPR024989 Major facilitator superfamily associated domain THII_3863 327d3015fdb10b71b1892767226660e7 359 PIRSF PIRSF004925 1 359 1.9E-95 T 15-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter THII_3863 327d3015fdb10b71b1892767226660e7 359 SUPERFAMILY SSF103473 1 354 1.96E-39 T 15-10-2018 IPR036259 MFS transporter superfamily THII_0565 df103faad9c2f37ff1019bf19d9e7b18 203 Pfam PF01930 Domain of unknown function DUF83 16 203 2.4E-16 T 15-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 THII_0565 df103faad9c2f37ff1019bf19d9e7b18 203 Gene3D G3DSA:3.90.320.10 7 203 7.9E-11 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal THII_0565 df103faad9c2f37ff1019bf19d9e7b18 203 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 14 203 2.4E-36 T 15-10-2018 IPR013343 CRISPR-associated protein Cas4 THII_3293 3b0a70c0debe0324042484cac72f0c7c 173 SMART SM01321 9 128 1.1E-23 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_3293 3b0a70c0debe0324042484cac72f0c7c 173 Pfam PF01797 Transposase IS200 like 15 127 2.0E-10 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_3293 3b0a70c0debe0324042484cac72f0c7c 173 Gene3D G3DSA:3.30.70.1290 1 170 1.2E-41 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_3293 3b0a70c0debe0324042484cac72f0c7c 173 SUPERFAMILY SSF143422 1 134 9.42E-28 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_1901 e1215c285be7aa434db0e56fc3025a1d 270 SUPERFAMILY SSF53335 32 263 7.67E-38 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1901 e1215c285be7aa434db0e56fc3025a1d 270 Gene3D G3DSA:3.40.50.150 42 260 1.2E-57 T 15-10-2018 THII_1901 e1215c285be7aa434db0e56fc3025a1d 270 Gene3D G3DSA:3.30.46.10 34 218 1.2E-57 T 15-10-2018 THII_1901 e1215c285be7aa434db0e56fc3025a1d 270 Pfam PF13649 Methyltransferase domain 63 160 3.9E-14 T 15-10-2018 THII_1901 e1215c285be7aa434db0e56fc3025a1d 270 PIRSF PIRSF000385 28 264 5.2E-29 T 15-10-2018 IPR014369 Glycine/Sarcosine N-methyltransferase GO:0017174 Reactome: R-HSA-2408508|Reactome: R-HSA-389661 THII_2850 0195b33f13dacda81f0f415a56085b38 356 Pfam PF01594 AI-2E family transporter 20 344 1.8E-68 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like THII_0559 2ec03d079b338236cb17c3f48b2ac17d 81 Pfam PF03937 Flavinator of succinate dehydrogenase 7 74 4.9E-20 T 15-10-2018 IPR005631 Flavinator of succinate dehydrogenase THII_0559 2ec03d079b338236cb17c3f48b2ac17d 81 SUPERFAMILY SSF109910 5 76 1.44E-18 T 15-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily THII_0559 2ec03d079b338236cb17c3f48b2ac17d 81 Gene3D G3DSA:1.10.150.250 1 80 1.9E-25 T 15-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily THII_3088 11d79b8b056a7407d5bb9d465482b3a1 395 SUPERFAMILY SSF51569 4 280 8.79E-80 T 15-10-2018 THII_3088 11d79b8b056a7407d5bb9d465482b3a1 395 Pfam PF00682 HMGL-like 6 262 9.4E-80 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 THII_3088 11d79b8b056a7407d5bb9d465482b3a1 395 Gene3D G3DSA:1.10.238.260 271 379 1.9E-25 T 15-10-2018 THII_3088 11d79b8b056a7407d5bb9d465482b3a1 395 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3088 11d79b8b056a7407d5bb9d465482b3a1 395 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 192 205 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 THII_3088 11d79b8b056a7407d5bb9d465482b3a1 395 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 6 369 7.0E-160 T 15-10-2018 IPR013477 Homocitrate synthase NifV-like GO:0046912|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 THII_3088 11d79b8b056a7407d5bb9d465482b3a1 395 Gene3D G3DSA:3.20.20.70 2 268 3.5E-83 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_2240 218f3cd18ad160add3c9e011e1cbdce0 62 Gene3D G3DSA:1.10.1660.10 7 53 1.4E-5 T 15-10-2018 THII_2240 218f3cd18ad160add3c9e011e1cbdce0 62 SUPERFAMILY SSF46955 13 44 8.7E-5 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily THII_2240 218f3cd18ad160add3c9e011e1cbdce0 62 Pfam PF13411 MerR HTH family regulatory protein 13 41 9.7E-5 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 THII_3462 df938c16b86fde6769afca2720575b62 270 Pfam PF02616 Segregation and condensation protein ScpA 53 265 1.6E-28 T 15-10-2018 IPR003768 Segregation and condensation protein A THII_3462 df938c16b86fde6769afca2720575b62 270 Hamap MF_01805 Segregation and condensation protein A [scpA]. 36 268 21.085 T 15-10-2018 IPR003768 Segregation and condensation protein A THII_0676 497057a04a32057236b700716f391352 80 SUPERFAMILY SSF47336 6 74 7.33E-11 T 15-10-2018 IPR036736 ACP-like superfamily THII_0676 497057a04a32057236b700716f391352 80 Pfam PF00550 Phosphopantetheine attachment site 8 73 7.3E-6 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_0676 497057a04a32057236b700716f391352 80 Gene3D G3DSA:1.10.1200.10 5 79 2.8E-16 T 15-10-2018 IPR036736 ACP-like superfamily THII_0351 69632ba47fb15acac97aa8914a9deded 320 Gene3D G3DSA:3.75.10.10 1 319 4.1E-121 T 15-10-2018 THII_0351 69632ba47fb15acac97aa8914a9deded 320 SUPERFAMILY SSF55909 1 318 1.25E-114 T 15-10-2018 THII_0351 69632ba47fb15acac97aa8914a9deded 320 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 1 318 4.9E-113 T 15-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 THII_2185 603dd221c214b7e34683a0379731eea5 134 SUPERFAMILY SSF55174 9 103 2.75E-27 T 15-10-2018 THII_2185 603dd221c214b7e34683a0379731eea5 134 SMART SM00363 10 73 4.6E-10 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_2185 603dd221c214b7e34683a0379731eea5 134 Gene3D G3DSA:3.10.290.10 4 109 1.8E-34 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 THII_2185 603dd221c214b7e34683a0379731eea5 134 PIRSF PIRSF016821 7 134 1.1E-43 T 15-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 THII_2185 603dd221c214b7e34683a0379731eea5 134 Pfam PF01479 S4 domain 10 56 1.6E-13 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_3091 1e9fe0990a029fc559fca4afb0fa8015 237 SUPERFAMILY SSF52980 17 235 4.02E-33 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3091 1e9fe0990a029fc559fca4afb0fa8015 237 Pfam PF12644 Protein of unknown function (DUF3782) 70 130 1.6E-6 T 15-10-2018 IPR024271 Protein of unknown function DUF3782 THII_3816 1318fc20055d7ece65c5ae07e1b08ac5 554 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 182 207 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site THII_3816 1318fc20055d7ece65c5ae07e1b08ac5 554 Pfam PF00474 Sodium:solute symporter family 67 473 3.6E-121 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 THII_3816 1318fc20055d7ece65c5ae07e1b08ac5 554 Gene3D G3DSA:1.20.1730.10 54 550 8.4E-63 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily THII_3816 1318fc20055d7ece65c5ae07e1b08ac5 554 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 67 473 7.1E-64 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 THII_2688 8a82bb44c6d7b201967845c3bc846712 170 Gene3D G3DSA:3.40.430.10 2 167 3.7E-41 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 THII_2688 8a82bb44c6d7b201967845c3bc846712 170 SUPERFAMILY SSF53597 1 169 1.28E-34 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 THII_2688 8a82bb44c6d7b201967845c3bc846712 170 Pfam PF01872 RibD C-terminal domain 2 162 4.0E-18 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 THII_3004 ec09d89798253868945f6887b6790809 126 SMART SM00530 6 61 9.0E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_3004 ec09d89798253868945f6887b6790809 126 Pfam PF01381 Helix-turn-helix 10 59 1.7E-10 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_3004 ec09d89798253868945f6887b6790809 126 SUPERFAMILY SSF47413 1 65 2.39E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_3004 ec09d89798253868945f6887b6790809 126 Gene3D G3DSA:1.10.260.40 1 87 4.7E-16 T 15-10-2018 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 SMART SM00962 100 296 2.4E-113 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 5.5E-177 T 15-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 Gene3D G3DSA:3.40.50.300 90 285 1.6E-121 T 15-10-2018 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 33.509 T 15-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 Gene3D G3DSA:1.20.120.140 5 305 1.6E-121 T 15-10-2018 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.4E-22 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 4.5E-72 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 SMART SM00963 1 86 6.6E-39 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 Pfam PF02978 Signal peptide binding domain 329 427 2.8E-33 T 15-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 SMART SM00382 99 247 5.3E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3074 23ffe726907eced7a9f86ac31862e70f 453 SUPERFAMILY SSF52540 42 352 2.03E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3074 23ffe726907eced7a9f86ac31862e70f 453 SUPERFAMILY SSF47446 298 430 3.14E-45 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 THII_3074 23ffe726907eced7a9f86ac31862e70f 453 Gene3D G3DSA:1.10.260.30 328 449 1.9E-43 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 THII_0485 fb50f00a5bcc5c8e23ea8da4936e4af6 235 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_0485 fb50f00a5bcc5c8e23ea8da4936e4af6 235 SUPERFAMILY SSF52540 17 234 1.91E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0485 fb50f00a5bcc5c8e23ea8da4936e4af6 235 Pfam PF00005 ABC transporter 36 183 5.4E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_0485 fb50f00a5bcc5c8e23ea8da4936e4af6 235 Gene3D G3DSA:3.40.50.300 15 235 3.2E-66 T 15-10-2018 THII_0485 fb50f00a5bcc5c8e23ea8da4936e4af6 235 SMART SM00382 45 231 8.8E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2381 5e7ac40b4dc62c6a5554c75a60537b33 314 Pfam PF00850 Histone deacetylase domain 22 311 6.0E-71 T 15-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 THII_2381 5e7ac40b4dc62c6a5554c75a60537b33 314 PRINTS PR01270 Histone deacetylase superfamily signature 123 146 1.9E-17 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 THII_2381 5e7ac40b4dc62c6a5554c75a60537b33 314 PRINTS PR01270 Histone deacetylase superfamily signature 157 172 1.9E-17 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 THII_2381 5e7ac40b4dc62c6a5554c75a60537b33 314 PRINTS PR01270 Histone deacetylase superfamily signature 242 252 1.9E-17 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 THII_2381 5e7ac40b4dc62c6a5554c75a60537b33 314 SUPERFAMILY SSF52768 2 314 8.63E-85 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily THII_2381 5e7ac40b4dc62c6a5554c75a60537b33 314 Gene3D G3DSA:3.40.800.20 1 314 2.6E-90 T 15-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 THII_0496 d504e4744ee8c7043f175feffa6d3e28 88 Pfam PF01797 Transposase IS200 like 12 42 7.7E-5 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_0496 d504e4744ee8c7043f175feffa6d3e28 88 SUPERFAMILY SSF143422 1 42 2.75E-10 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_0496 d504e4744ee8c7043f175feffa6d3e28 88 Gene3D G3DSA:3.30.70.1290 1 51 3.9E-7 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_0302 871a5f1dd64b3af5bc81bb46cd4a850b 122 Gene3D G3DSA:2.40.150.20 1 122 1.7E-53 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 THII_0302 871a5f1dd64b3af5bc81bb46cd4a850b 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.069 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 THII_0302 871a5f1dd64b3af5bc81bb46cd4a850b 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.4E-56 T 15-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 THII_0302 871a5f1dd64b3af5bc81bb46cd4a850b 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 7.5E-54 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 THII_0302 871a5f1dd64b3af5bc81bb46cd4a850b 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 15-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0302 871a5f1dd64b3af5bc81bb46cd4a850b 122 SUPERFAMILY SSF50193 1 122 2.09E-50 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 THII_0302 871a5f1dd64b3af5bc81bb46cd4a850b 122 SMART SM01374 1 122 1.2E-83 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 THII_0865 f5d5564bdbd2a71f143f3fd032ba9974 361 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 18 346 9.9E-118 T 15-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 THII_0865 f5d5564bdbd2a71f143f3fd032ba9974 361 Gene3D G3DSA:1.20.1530.20 15 349 5.8E-24 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily THII_0865 f5d5564bdbd2a71f143f3fd032ba9974 361 Pfam PF01758 Sodium Bile acid symporter family 63 259 4.7E-47 T 15-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 THII_0865 f5d5564bdbd2a71f143f3fd032ba9974 361 PIRSF PIRSF005508 4 361 3.5E-123 T 15-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 THII_2212 3d5587a3f702667d18c01a9dfc79da4b 210 Pfam PF01609 Transposase DDE domain 40 192 1.5E-6 T 15-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 THII_2212 3d5587a3f702667d18c01a9dfc79da4b 210 SUPERFAMILY SSF53098 27 193 3.64E-5 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_0941 48a0f6d04005a824a03a6bde3dcd1bf5 311 PIRSF PIRSF028235 1 311 3.1E-154 T 15-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 THII_0941 48a0f6d04005a824a03a6bde3dcd1bf5 311 SUPERFAMILY SSF64182 3 308 9.68E-11 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily THII_3860 7a1fe33848b283ea3c6cdcecfa5d8905 249 Pfam PF13183 4Fe-4S dicluster domain 159 231 2.5E-9 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_3860 7a1fe33848b283ea3c6cdcecfa5d8905 249 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 61 69 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 THII_3860 7a1fe33848b283ea3c6cdcecfa5d8905 249 SUPERFAMILY SSF46548 123 247 3.49E-21 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_3860 7a1fe33848b283ea3c6cdcecfa5d8905 249 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 123 1.7E-21 T 15-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 THII_3860 7a1fe33848b283ea3c6cdcecfa5d8905 249 Gene3D G3DSA:3.10.20.30 3 119 1.8E-24 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_3860 7a1fe33848b283ea3c6cdcecfa5d8905 249 Gene3D G3DSA:1.10.1060.10 134 248 9.4E-13 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_3860 7a1fe33848b283ea3c6cdcecfa5d8905 249 SUPERFAMILY SSF54292 4 119 3.5E-21 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 THII_2413 2e14d5833e4c61bc4805f43c40c12347 231 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 1.1E-77 T 15-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 THII_2413 2e14d5833e4c61bc4805f43c40c12347 231 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 200 1.2E-60 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_2413 2e14d5833e4c61bc4805f43c40c12347 231 PIRSF PIRSF006102 1 217 1.3E-73 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_2413 2e14d5833e4c61bc4805f43c40c12347 231 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 26.529 T 15-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 THII_1674 df51473b66e677d48bce5390c0a036db 375 Pfam PF13247 4Fe-4S dicluster domain 145 240 4.1E-32 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_1674 df51473b66e677d48bce5390c0a036db 375 SUPERFAMILY SSF54862 24 284 3.24E-63 T 15-10-2018 THII_1674 df51473b66e677d48bce5390c0a036db 375 Gene3D G3DSA:3.30.70.20 15 331 3.3E-95 T 15-10-2018 THII_1015 54dcac833e3956adff9424c306ca2eb6 380 Pfam PF06996 Type VI secretion, TssG 21 362 2.1E-90 T 15-10-2018 IPR010732 Type VI secretion, TssG-like THII_1015 54dcac833e3956adff9424c306ca2eb6 380 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 362 2.1E-90 T 15-10-2018 IPR010732 Type VI secretion, TssG-like THII_2218 32b431623aa8f71b445d200dbe8eb236 100 Pfam PF13808 DDE_Tnp_1-associated 14 96 6.6E-28 T 15-10-2018 IPR032806 H repeat-associated protein, N-terminal THII_0779 3a5adbfd4f2b7eaa983a0165475bb0e1 375 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 197 302 9.8E-7 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_0779 3a5adbfd4f2b7eaa983a0165475bb0e1 375 SUPERFAMILY SSF51905 3 318 1.52E-33 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_0779 3a5adbfd4f2b7eaa983a0165475bb0e1 375 Gene3D G3DSA:3.50.50.100 1 375 2.2E-81 T 15-10-2018 THII_0779 3a5adbfd4f2b7eaa983a0165475bb0e1 375 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 119 1.6E-9 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 THII_2467 25bf7e523c7dab7e06cc14f84f032434 347 SUPERFAMILY SSF52540 22 162 1.12E-19 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2467 25bf7e523c7dab7e06cc14f84f032434 347 Pfam PF07728 AAA domain (dynein-related subfamily) 24 153 2.7E-10 T 15-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 THII_2467 25bf7e523c7dab7e06cc14f84f032434 347 Gene3D G3DSA:3.40.50.300 12 165 1.6E-23 T 15-10-2018 THII_2467 25bf7e523c7dab7e06cc14f84f032434 347 SMART SM00382 21 164 7.9E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_3021 84756c75ac6b645530cf1b1fcf2e68f1 441 Gene3D G3DSA:3.20.20.140 64 354 6.9E-163 T 15-10-2018 THII_3021 84756c75ac6b645530cf1b1fcf2e68f1 441 SUPERFAMILY SSF51338 5 435 1.65E-23 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 THII_3021 84756c75ac6b645530cf1b1fcf2e68f1 441 Pfam PF01979 Amidohydrolase family 61 408 8.7E-71 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 THII_3021 84756c75ac6b645530cf1b1fcf2e68f1 441 SUPERFAMILY SSF51556 63 362 9.36E-98 T 15-10-2018 IPR032466 Metal-dependent hydrolase THII_3021 84756c75ac6b645530cf1b1fcf2e68f1 441 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 5 436 40.124 T 15-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 THII_3021 84756c75ac6b645530cf1b1fcf2e68f1 441 Gene3D G3DSA:2.30.40.10 7 427 6.9E-163 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 THII_0144 2403afb3231bfcbefaf40d5b0beb6dff 90 SMART SM00411 1 90 1.9E-44 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0144 2403afb3231bfcbefaf40d5b0beb6dff 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.8E-34 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0144 2403afb3231bfcbefaf40d5b0beb6dff 90 Gene3D G3DSA:4.10.520.10 1 90 1.2E-37 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 THII_0144 2403afb3231bfcbefaf40d5b0beb6dff 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.5E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0144 2403afb3231bfcbefaf40d5b0beb6dff 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.5E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0144 2403afb3231bfcbefaf40d5b0beb6dff 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.5E-19 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 THII_0144 2403afb3231bfcbefaf40d5b0beb6dff 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 THII_0144 2403afb3231bfcbefaf40d5b0beb6dff 90 SUPERFAMILY SSF47729 1 90 1.46E-33 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 THII_2665 6c3d9a0c2d0b2c1c1e0914a7d3e906db 108 Pfam PF05954 Phage late control gene D protein (GPD) 32 107 1.2E-20 T 15-10-2018 THII_2665 6c3d9a0c2d0b2c1c1e0914a7d3e906db 108 Gene3D G3DSA:2.30.110.50 7 107 3.3E-31 T 15-10-2018 THII_2665 6c3d9a0c2d0b2c1c1e0914a7d3e906db 108 SUPERFAMILY SSF69279 14 108 4.93E-23 T 15-10-2018 THII_3123 54bc2a39ded9d852cf8ee8f3b441b0ef 412 Gene3D G3DSA:3.40.50.2000 211 387 5.1E-26 T 15-10-2018 THII_3123 54bc2a39ded9d852cf8ee8f3b441b0ef 412 Pfam PF00534 Glycosyl transferases group 1 214 382 8.8E-15 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_3123 54bc2a39ded9d852cf8ee8f3b441b0ef 412 Pfam PF13579 Glycosyl transferase 4-like domain 18 200 2.1E-24 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 THII_3123 54bc2a39ded9d852cf8ee8f3b441b0ef 412 Gene3D G3DSA:3.40.50.2000 4 210 3.3E-22 T 15-10-2018 THII_3123 54bc2a39ded9d852cf8ee8f3b441b0ef 412 SUPERFAMILY SSF53756 4 402 8.3E-56 T 15-10-2018 THII_2118 7a5526c4995231184bc498395db0ff47 265 Gene3D G3DSA:3.40.190.80 141 265 2.3E-41 T 15-10-2018 THII_2118 7a5526c4995231184bc498395db0ff47 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 6.7E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_2118 7a5526c4995231184bc498395db0ff47 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.7E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_2118 7a5526c4995231184bc498395db0ff47 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 175 196 6.7E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_2118 7a5526c4995231184bc498395db0ff47 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 6.7E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_2118 7a5526c4995231184bc498395db0ff47 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.7E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_2118 7a5526c4995231184bc498395db0ff47 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 6.7E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_2118 7a5526c4995231184bc498395db0ff47 265 SUPERFAMILY SSF56655 1 258 5.89E-91 T 15-10-2018 THII_2118 7a5526c4995231184bc498395db0ff47 265 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 209 223 - T 15-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 THII_2118 7a5526c4995231184bc498395db0ff47 265 Pfam PF00459 Inositol monophosphatase family 2 256 2.0E-71 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 THII_2118 7a5526c4995231184bc498395db0ff47 265 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site THII_2118 7a5526c4995231184bc498395db0ff47 265 Gene3D G3DSA:3.30.540.10 1 139 1.6E-51 T 15-10-2018 THII_2118 7a5526c4995231184bc498395db0ff47 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 154 180 3.3E-26 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 THII_2118 7a5526c4995231184bc498395db0ff47 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 3.3E-26 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 THII_2118 7a5526c4995231184bc498395db0ff47 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 196 208 3.3E-26 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 THII_2118 7a5526c4995231184bc498395db0ff47 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 3.3E-26 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 THII_3697 0a618116440fd96db07bd3b8b1dedef0 789 Gene3D G3DSA:3.80.10.10 3 204 3.8E-35 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_3697 0a618116440fd96db07bd3b8b1dedef0 789 SUPERFAMILY SSF52058 47 174 1.53E-32 T 15-10-2018 THII_1706 3b036a444f490a3be4cb17e946122609 296 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 87 221 2.4E-27 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_1706 3b036a444f490a3be4cb17e946122609 296 Pfam PF05050 Methyltransferase FkbM domain 89 242 7.6E-16 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_1706 3b036a444f490a3be4cb17e946122609 296 SUPERFAMILY SSF53335 60 250 4.01E-46 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1706 3b036a444f490a3be4cb17e946122609 296 Gene3D G3DSA:3.40.50.150 75 247 1.7E-35 T 15-10-2018 THII_2028 adfb83b24977312c7869503803d209cf 586 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 302 472 5.1E-19 T 15-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain THII_2028 adfb83b24977312c7869503803d209cf 586 Pfam PF17482 Phage tail sheath C-terminal domain 473 580 1.7E-12 T 15-10-2018 IPR020287 Tail sheath protein, C-terminal domain THII_2028 adfb83b24977312c7869503803d209cf 586 Gene3D G3DSA:3.40.50.11780 283 434 9.6E-10 T 15-10-2018 THII_2964 a4a2092b49fc061b122d80e6b8ac25bd 108 Pfam PF00515 Tetratricopeptide repeat 22 52 1.8E-8 T 15-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 THII_2964 a4a2092b49fc061b122d80e6b8ac25bd 108 Gene3D G3DSA:1.25.40.10 1 107 2.2E-27 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2964 a4a2092b49fc061b122d80e6b8ac25bd 108 SMART SM00028 19 52 4.2E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2964 a4a2092b49fc061b122d80e6b8ac25bd 108 SMART SM00028 53 86 12.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_2964 a4a2092b49fc061b122d80e6b8ac25bd 108 SUPERFAMILY SSF48452 5 99 3.08E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0409 93e0f0f58f9ff33bf6582d22bab8199a 266 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 68 200 4.3E-25 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_0409 93e0f0f58f9ff33bf6582d22bab8199a 266 Pfam PF05050 Methyltransferase FkbM domain 70 226 7.5E-20 T 15-10-2018 IPR006342 Methyltransferase FkbM THII_0409 93e0f0f58f9ff33bf6582d22bab8199a 266 Gene3D G3DSA:3.40.50.150 57 232 3.0E-29 T 15-10-2018 THII_0409 93e0f0f58f9ff33bf6582d22bab8199a 266 SUPERFAMILY SSF53335 11 234 1.55E-39 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3112 4cd60a961fd594fd87e0b47475056031 425 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 317 5.4E-21 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THII_3112 4cd60a961fd594fd87e0b47475056031 425 SUPERFAMILY SSF111369 68 321 4.97E-20 T 15-10-2018 THII_3112 4cd60a961fd594fd87e0b47475056031 425 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 338 1.1E-41 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 THII_0312 6ecd6ad0de0a70d6c890fa201143328b 216 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 5.6E-87 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0312 6ecd6ad0de0a70d6c890fa201143328b 216 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 15-10-2018 IPR019926 Ribosomal protein L3, conserved site THII_0312 6ecd6ad0de0a70d6c890fa201143328b 216 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.775 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0312 6ecd6ad0de0a70d6c890fa201143328b 216 SUPERFAMILY SSF50447 1 213 1.24E-79 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily THII_0312 6ecd6ad0de0a70d6c890fa201143328b 216 Gene3D G3DSA:2.40.50.620 33 99 2.3E-13 T 15-10-2018 THII_0312 6ecd6ad0de0a70d6c890fa201143328b 216 Pfam PF00297 Ribosomal protein L3 98 185 2.5E-16 T 15-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_0312 6ecd6ad0de0a70d6c890fa201143328b 216 Gene3D G3DSA:2.40.30.10 123 213 3.6E-15 T 15-10-2018 THII_0289 0a73e594de9fcc57c70bcebd47b834be 206 SUPERFAMILY SSF55174 3 206 2.88E-71 T 15-10-2018 THII_0289 0a73e594de9fcc57c70bcebd47b834be 206 SMART SM00363 96 160 1.3E-18 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0289 0a73e594de9fcc57c70bcebd47b834be 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 35.331 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 THII_0289 0a73e594de9fcc57c70bcebd47b834be 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 4.0E-80 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 THII_0289 0a73e594de9fcc57c70bcebd47b834be 206 Gene3D G3DSA:3.10.290.10 95 191 8.8E-78 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 THII_0289 0a73e594de9fcc57c70bcebd47b834be 206 Gene3D G3DSA:1.10.1050.10 6 206 8.8E-78 T 15-10-2018 THII_0289 0a73e594de9fcc57c70bcebd47b834be 206 SMART SM01390 3 95 7.7E-46 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 THII_0289 0a73e594de9fcc57c70bcebd47b834be 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 15-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0289 0a73e594de9fcc57c70bcebd47b834be 206 Pfam PF01479 S4 domain 97 143 1.3E-19 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0289 0a73e594de9fcc57c70bcebd47b834be 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 8.2E-31 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 THII_1919 fee1baf1416bf615d16961cee1ea357c 209 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 7 204 3.1E-32 T 15-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_1919 fee1baf1416bf615d16961cee1ea357c 209 Pfam PF01813 ATP synthase subunit D 15 202 3.1E-41 T 15-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_1919 fee1baf1416bf615d16961cee1ea357c 209 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 5 208 18.597 T 15-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_2880 7d169a26c2436d799726b94b59d8dd36 147 Gene3D G3DSA:3.30.70.3460 64 117 2.2E-22 T 15-10-2018 THII_2880 7d169a26c2436d799726b94b59d8dd36 147 Gene3D G3DSA:1.10.10.2890 7 63 2.2E-22 T 15-10-2018 THII_3127 95f313e5ce709b52d1cf1423df5331ee 95 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 THII_3127 95f313e5ce709b52d1cf1423df5331ee 95 SUPERFAMILY SSF54292 5 92 1.11E-20 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 THII_3127 95f313e5ce709b52d1cf1423df5331ee 95 Gene3D G3DSA:3.10.20.30 1 94 2.0E-19 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_3127 95f313e5ce709b52d1cf1423df5331ee 95 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 85 3.1E-14 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 THII_2374 3927624b39f37d8581b5a4de1639c259 205 Gene3D G3DSA:3.40.109.10 3 199 5.7E-54 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 THII_2374 3927624b39f37d8581b5a4de1639c259 205 Pfam PF00881 Nitroreductase family 16 162 3.7E-26 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 THII_2374 3927624b39f37d8581b5a4de1639c259 205 SUPERFAMILY SSF55469 5 197 1.2E-45 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 THII_0991 adbd8e20d82fd18e516a566fb80b4865 95 SUPERFAMILY SSF143880 1 77 1.7E-19 T 15-10-2018 IPR036782 NE0471-like, N-terminal THII_0991 adbd8e20d82fd18e516a566fb80b4865 95 Pfam PF10387 Protein of unknown function (DUF2442) 5 77 1.7E-18 T 15-10-2018 IPR018841 Protein of unknown function DUF2442 THII_0991 adbd8e20d82fd18e516a566fb80b4865 95 Gene3D G3DSA:3.30.2020.10 1 80 2.5E-10 T 15-10-2018 IPR036782 NE0471-like, N-terminal THII_3138 e4e5417d84a2a80c79ad6c27b862ee68 320 SUPERFAMILY SSF51430 1 318 2.62E-99 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily THII_3138 e4e5417d84a2a80c79ad6c27b862ee68 320 Pfam PF00248 Aldo/keto reductase family 15 314 4.1E-76 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain THII_3138 e4e5417d84a2a80c79ad6c27b862ee68 320 PRINTS PR00069 Aldo-keto reductase signature 113 131 1.3E-9 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 THII_3138 e4e5417d84a2a80c79ad6c27b862ee68 320 PRINTS PR00069 Aldo-keto reductase signature 47 71 1.3E-9 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 THII_3138 e4e5417d84a2a80c79ad6c27b862ee68 320 PRINTS PR00069 Aldo-keto reductase signature 144 161 1.3E-9 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 THII_3138 e4e5417d84a2a80c79ad6c27b862ee68 320 Gene3D G3DSA:3.20.20.100 1 319 6.9E-110 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily THII_0610 054f7078046c06d1890d868ec631d66a 310 SUPERFAMILY SSF51197 53 305 6.87E-41 T 15-10-2018 THII_0610 054f7078046c06d1890d868ec631d66a 310 Gene3D G3DSA:3.60.130.10 48 308 5.6E-30 T 15-10-2018 THII_0610 054f7078046c06d1890d868ec631d66a 310 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 83 300 5.6E-18 T 15-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 THII_0287 bc8311e6d3905335130ec79a5094f0e5 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.167 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0287 bc8311e6d3905335130ec79a5094f0e5 129 Gene3D G3DSA:3.90.1030.10 1 116 1.5E-44 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0287 bc8311e6d3905335130ec79a5094f0e5 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0287 bc8311e6d3905335130ec79a5094f0e5 129 SUPERFAMILY SSF64263 1 119 2.75E-48 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0287 bc8311e6d3905335130ec79a5094f0e5 129 Pfam PF01196 Ribosomal protein L17 20 116 9.6E-34 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_0287 bc8311e6d3905335130ec79a5094f0e5 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 9 117 2.7E-44 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 THII_1895 355f28430d80e1301f0d03660e70f058 475 SUPERFAMILY SSF101898 179 469 9.68E-31 T 15-10-2018 THII_1895 355f28430d80e1301f0d03660e70f058 475 SUPERFAMILY SSF52833 8 141 1.54E-26 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_1895 355f28430d80e1301f0d03660e70f058 475 Pfam PF13905 Thioredoxin-like 30 124 2.9E-10 T 15-10-2018 IPR012336 Thioredoxin-like fold THII_1895 355f28430d80e1301f0d03660e70f058 475 Gene3D G3DSA:3.40.30.10 4 146 4.9E-32 T 15-10-2018 THII_1895 355f28430d80e1301f0d03660e70f058 475 Gene3D G3DSA:2.120.10.30 147 309 2.9E-27 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_1895 355f28430d80e1301f0d03660e70f058 475 Gene3D G3DSA:2.120.10.30 310 420 6.7E-21 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like THII_3412 c93046570573e731b05c060af64ebc9b 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 8.8E-32 T 15-10-2018 IPR013551 Domain of unknown function DUF1732 THII_3412 c93046570573e731b05c060af64ebc9b 287 Pfam PF03755 YicC-like family, N-terminal region 2 154 3.0E-42 T 15-10-2018 IPR013527 YicC-like, N-terminal THII_3412 c93046570573e731b05c060af64ebc9b 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.7E-86 T 15-10-2018 IPR005229 Conserved hypothetical protein CHP00255 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 Pfam PF00871 Acetokinase family 5 383 2.2E-109 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 Gene3D G3DSA:3.30.420.40 199 391 2.3E-72 T 15-10-2018 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 PIRSF PIRSF000722 1 391 1.1E-141 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 SUPERFAMILY SSF53067 160 389 7.23E-75 T 15-10-2018 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 SUPERFAMILY SSF53067 4 197 5.57E-59 T 15-10-2018 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 PRINTS PR00471 Acetate kinase family signature 370 382 5.4E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 PRINTS PR00471 Acetate kinase family signature 296 309 5.4E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 PRINTS PR00471 Acetate kinase family signature 318 334 5.4E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 PRINTS PR00471 Acetate kinase family signature 175 188 5.4E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 PRINTS PR00471 Acetate kinase family signature 5 16 5.4E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 PRINTS PR00471 Acetate kinase family signature 203 224 5.4E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 TIGRFAM TIGR00016 ackA: acetate kinase 3 389 1.3E-111 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 Hamap MF_00020 Acetate kinase [ackA]. 1 391 156.008 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 THII_2859 8506a4c3fab8dcd877c480e4e62af296 391 Gene3D G3DSA:3.30.420.40 1 196 2.3E-62 T 15-10-2018 THII_2092 6ebadf1279047337614af9044d70dc25 124 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 47 123 6.3E-14 T 15-10-2018 IPR006260 TonB/TolA, C-terminal THII_2092 6ebadf1279047337614af9044d70dc25 124 Gene3D G3DSA:3.30.1150.10 21 124 7.9E-17 T 15-10-2018 THII_2092 6ebadf1279047337614af9044d70dc25 124 SUPERFAMILY SSF74653 42 124 4.45E-16 T 15-10-2018 THII_2092 6ebadf1279047337614af9044d70dc25 124 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 46 123 1.1E-15 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 THII_3487 7a9f6fd44d8d71d6a5631fe0a5df61b5 490 Pfam PF00534 Glycosyl transferases group 1 299 436 4.7E-11 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_3487 7a9f6fd44d8d71d6a5631fe0a5df61b5 490 Pfam PF08323 Starch synthase catalytic domain 3 242 5.9E-68 T 15-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 THII_3487 7a9f6fd44d8d71d6a5631fe0a5df61b5 490 Hamap MF_00484 Glycogen synthase [glgA]. 1 487 38.408 T 15-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 THII_3487 7a9f6fd44d8d71d6a5631fe0a5df61b5 490 Gene3D G3DSA:3.40.50.2000 257 469 2.5E-152 T 15-10-2018 THII_3487 7a9f6fd44d8d71d6a5631fe0a5df61b5 490 Gene3D G3DSA:3.40.50.2000 3 484 2.5E-152 T 15-10-2018 THII_3487 7a9f6fd44d8d71d6a5631fe0a5df61b5 490 SUPERFAMILY SSF53756 3 489 2.41E-103 T 15-10-2018 THII_3487 7a9f6fd44d8d71d6a5631fe0a5df61b5 490 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 486 6.1E-156 T 15-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 THII_0192 bbf89ab8c61ace9b6b289f4b11f8d8f6 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 142 166 5.1E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 THII_0192 bbf89ab8c61ace9b6b289f4b11f8d8f6 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 179 198 5.1E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 THII_0192 bbf89ab8c61ace9b6b289f4b11f8d8f6 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 37 58 5.1E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 THII_0192 bbf89ab8c61ace9b6b289f4b11f8d8f6 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 5.1E-7 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 THII_0192 bbf89ab8c61ace9b6b289f4b11f8d8f6 261 Pfam PF01061 ABC-2 type transporter 32 221 1.3E-14 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 THII_1425 a2357a224b81bc85c8af02dc42e0c6e4 157 Gene3D G3DSA:3.40.50.2300 1 156 2.5E-55 T 15-10-2018 THII_1425 a2357a224b81bc85c8af02dc42e0c6e4 157 SMART SM00226 2 151 3.1E-45 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I THII_1425 a2357a224b81bc85c8af02dc42e0c6e4 157 SUPERFAMILY SSF52788 1 152 4.06E-50 T 15-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily THII_1425 a2357a224b81bc85c8af02dc42e0c6e4 157 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 146 2.6E-39 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I THII_1425 a2357a224b81bc85c8af02dc42e0c6e4 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 2.5E-19 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 THII_1425 a2357a224b81bc85c8af02dc42e0c6e4 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 2.5E-19 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 THII_1425 a2357a224b81bc85c8af02dc42e0c6e4 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 2.5E-19 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 THII_1425 a2357a224b81bc85c8af02dc42e0c6e4 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 2.5E-19 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 THII_1027 96162f99ae517e7a52df7e82dddf2c60 564 Pfam PF04225 Opacity-associated protein A LysM-like domain 170 251 5.5E-9 T 15-10-2018 IPR007340 Opacity-associated protein A THII_1027 96162f99ae517e7a52df7e82dddf2c60 564 Gene3D G3DSA:3.10.450.350 275 495 9.3E-73 T 15-10-2018 THII_1027 96162f99ae517e7a52df7e82dddf2c60 564 Pfam PF01551 Peptidase family M23 390 486 4.9E-30 T 15-10-2018 IPR016047 Peptidase M23 THII_1027 96162f99ae517e7a52df7e82dddf2c60 564 SUPERFAMILY SSF51261 274 487 2.51E-60 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_1027 96162f99ae517e7a52df7e82dddf2c60 564 Gene3D G3DSA:3.10.450.350 169 254 6.0E-9 T 15-10-2018 THII_1027 96162f99ae517e7a52df7e82dddf2c60 564 Gene3D G3DSA:2.70.70.10 361 492 9.3E-73 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_3434 2ac2fbcefbd5cf3fffa4e6c25ee164f5 186 Gene3D G3DSA:3.30.70.1070 108 184 5.9E-8 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 THII_3434 2ac2fbcefbd5cf3fffa4e6c25ee164f5 186 Pfam PF02641 Uncharacterized ACR, COG1993 6 91 1.6E-18 T 15-10-2018 IPR003793 Domain of unknown function DUF190 THII_3434 2ac2fbcefbd5cf3fffa4e6c25ee164f5 186 Gene3D G3DSA:3.30.70.120 2 107 4.1E-20 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THII_3434 2ac2fbcefbd5cf3fffa4e6c25ee164f5 186 Pfam PF05036 Sporulation related domain 110 182 4.9E-12 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 THII_3434 2ac2fbcefbd5cf3fffa4e6c25ee164f5 186 SUPERFAMILY SSF110997 109 182 7.06E-11 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 THII_3434 2ac2fbcefbd5cf3fffa4e6c25ee164f5 186 SUPERFAMILY SSF54913 4 95 8.23E-20 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta THII_3193 b41ad3d0ce7cf5469204fd196f1caa18 220 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 7 207 6.9E-13 T 15-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 THII_2154 dfad77590afb81b7b38ad05440fa60fb 328 Pfam PF00685 Sulfotransferase domain 16 246 2.5E-8 T 15-10-2018 IPR000863 Sulfotransferase domain GO:0008146 THII_2154 dfad77590afb81b7b38ad05440fa60fb 328 Gene3D G3DSA:3.40.50.300 11 313 6.7E-23 T 15-10-2018 THII_2154 dfad77590afb81b7b38ad05440fa60fb 328 SUPERFAMILY SSF52540 13 250 1.17E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0642 2ad0c1479c65f513d0eec8dbaa38461e 279 Pfam PF05711 Macrocin-O-methyltransferase (TylF) 7 279 1.9E-107 T 15-10-2018 IPR008884 Macrocin-O-methyltransferase THII_0642 2ad0c1479c65f513d0eec8dbaa38461e 279 Gene3D G3DSA:3.40.50.150 6 279 3.2E-79 T 15-10-2018 THII_0642 2ad0c1479c65f513d0eec8dbaa38461e 279 SUPERFAMILY SSF53335 96 247 9.43E-9 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1369 ca07ae8c96abee114c3467d2aa0e902c 215 Gene3D G3DSA:3.40.50.1820 1 214 6.5E-39 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1369 ca07ae8c96abee114c3467d2aa0e902c 215 SUPERFAMILY SSF53474 3 214 3.1E-33 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1369 ca07ae8c96abee114c3467d2aa0e902c 215 Pfam PF01738 Dienelactone hydrolase family 11 214 9.9E-33 T 15-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 THII_2587 a274d624afc33391ddd458ebe706c02f 93 Gene3D G3DSA:3.30.2310.20 1 93 2.6E-23 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2587 a274d624afc33391ddd458ebe706c02f 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 93 2.7E-20 T 15-10-2018 IPR007711 Toxin HigB-1 THII_2587 a274d624afc33391ddd458ebe706c02f 93 SUPERFAMILY SSF143011 1 93 6.67E-12 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_0704 96dcd98b8f7f8b7553c517a24181d586 112 SUPERFAMILY SSF117856 1 107 7.32E-34 T 15-10-2018 THII_0704 96dcd98b8f7f8b7553c517a24181d586 112 Gene3D G3DSA:3.30.1330.80 1 75 9.2E-32 T 15-10-2018 THII_0704 96dcd98b8f7f8b7553c517a24181d586 112 Pfam PF03306 Alpha-acetolactate decarboxylase 1 96 2.6E-33 T 15-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 THII_2679 26948ad5ecff63e26bdb511640866319 301 Pfam PF09828 Chromate resistance exported protein 162 287 1.1E-38 T 15-10-2018 IPR018634 Chromate resistance exported protein THII_3760 6d7f806547c4ef76d0c1852182d771a6 91 SUPERFAMILY SSF88723 6 76 2.0E-7 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_1887 7e49d5a2f0ad58a1c39f84e1ddfaf44d 176 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 170 3.5E-45 T 15-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 THII_1887 7e49d5a2f0ad58a1c39f84e1ddfaf44d 176 Gene3D G3DSA:2.20.25.120 54 86 1.9E-58 T 15-10-2018 THII_1887 7e49d5a2f0ad58a1c39f84e1ddfaf44d 176 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 144 3.8E-50 T 15-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 THII_1887 7e49d5a2f0ad58a1c39f84e1ddfaf44d 176 SUPERFAMILY SSF52540 8 171 1.93E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1887 7e49d5a2f0ad58a1c39f84e1ddfaf44d 176 Gene3D G3DSA:3.40.50.300 11 168 1.9E-58 T 15-10-2018 THII_3279 8165377a8fb6fa2332a93bd2ecaa9cca 238 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 135 236 7.7E-30 T 15-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 THII_3279 8165377a8fb6fa2332a93bd2ecaa9cca 238 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 13 238 7.2E-64 T 15-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 THII_3279 8165377a8fb6fa2332a93bd2ecaa9cca 238 Gene3D G3DSA:3.30.750.120 9 124 2.2E-27 T 15-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily THII_3279 8165377a8fb6fa2332a93bd2ecaa9cca 238 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 13 91 2.4E-17 T 15-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 THII_3279 8165377a8fb6fa2332a93bd2ecaa9cca 238 Gene3D G3DSA:2.160.20.70 132 238 4.3E-31 T 15-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 THII_3279 8165377a8fb6fa2332a93bd2ecaa9cca 238 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 12 238 24.995 T 15-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 THII_3279 8165377a8fb6fa2332a93bd2ecaa9cca 238 SUPERFAMILY SSF63848 133 238 6.15E-29 T 15-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 THII_0098 8613a0f9c0630a721c13e3d625acae09 591 Pfam PF03169 OPT oligopeptide transporter protein 17 580 9.2E-53 T 15-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 THII_0098 8613a0f9c0630a721c13e3d625acae09 591 PRINTS PR00173 Glutamate-aspartate symporter signature 109 134 3.3E-6 T 15-10-2018 THII_0098 8613a0f9c0630a721c13e3d625acae09 591 PRINTS PR00173 Glutamate-aspartate symporter signature 271 290 3.3E-6 T 15-10-2018 THII_0098 8613a0f9c0630a721c13e3d625acae09 591 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 3.3E-6 T 15-10-2018 THII_0098 8613a0f9c0630a721c13e3d625acae09 591 PRINTS PR00173 Glutamate-aspartate symporter signature 387 413 3.3E-6 T 15-10-2018 THII_3617 264654e26fed32f7eb6fe8707de7e52b 318 SUPERFAMILY SSF50891 5 185 9.35E-51 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily THII_3617 264654e26fed32f7eb6fe8707de7e52b 318 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 25 184 6.3E-45 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 THII_3617 264654e26fed32f7eb6fe8707de7e52b 318 Gene3D G3DSA:2.40.100.10 22 187 2.5E-59 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily THII_3617 264654e26fed32f7eb6fe8707de7e52b 318 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 6.1E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 THII_3617 264654e26fed32f7eb6fe8707de7e52b 318 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 156 6.1E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 THII_3617 264654e26fed32f7eb6fe8707de7e52b 318 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 38 53 6.1E-12 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 THII_3617 264654e26fed32f7eb6fe8707de7e52b 318 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 - T 15-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 THII_0746 cb026b910d6d6fdd1ba930dcee44e54b 147 SMART SM00226 7 146 0.0021 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I THII_0746 cb026b910d6d6fdd1ba930dcee44e54b 147 Gene3D G3DSA:3.40.50.2300 7 144 9.2E-19 T 15-10-2018 THII_0746 cb026b910d6d6fdd1ba930dcee44e54b 147 SUPERFAMILY SSF52788 7 123 4.45E-18 T 15-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily THII_0746 cb026b910d6d6fdd1ba930dcee44e54b 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 102 1.5E-8 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I THII_2423 44e70bacaf1b254d0bde3ccd442e27db 257 Gene3D G3DSA:3.30.1330.60 112 257 5.8E-22 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_2423 44e70bacaf1b254d0bde3ccd442e27db 257 Pfam PF00691 OmpA family 156 242 6.8E-13 T 15-10-2018 IPR006665 OmpA-like domain THII_2423 44e70bacaf1b254d0bde3ccd442e27db 257 SUPERFAMILY SSF103088 124 249 3.01E-19 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_3641 30ee3428bf41123af5e627edc86264f3 687 Gene3D G3DSA:3.90.550.10 97 322 1.8E-12 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3641 30ee3428bf41123af5e627edc86264f3 687 SUPERFAMILY SSF53448 98 386 2.67E-17 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3641 30ee3428bf41123af5e627edc86264f3 687 Pfam PF13632 Glycosyl transferase family group 2 196 390 5.6E-14 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_3375 98a6f10cb71c837e1fc957e076a14c7b 444 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 49 383 2.3E-35 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_3375 98a6f10cb71c837e1fc957e076a14c7b 444 SUPERFAMILY SSF52540 48 404 4.92E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2104 ee24aff7690e71cd6ff7bcc72827d049 93 Gene3D G3DSA:3.30.300.90 6 93 7.5E-31 T 15-10-2018 THII_2104 ee24aff7690e71cd6ff7bcc72827d049 93 SUPERFAMILY SSF82657 8 93 6.41E-28 T 15-10-2018 IPR036065 BolA-like superfamily THII_2104 ee24aff7690e71cd6ff7bcc72827d049 93 PIRSF PIRSF003113 4 93 3.5E-29 T 15-10-2018 IPR002634 BolA protein THII_2104 ee24aff7690e71cd6ff7bcc72827d049 93 Pfam PF01722 BolA-like protein 14 90 8.1E-30 T 15-10-2018 IPR002634 BolA protein THII_1617 07c17772fd275c1041fbcc5ad681c450 59 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 46 4.1E-14 T 15-10-2018 IPR008621 Cbb3-type cytochrome oxidase component THII_0600 e6fd55dadc97c18e0e224ac885d16b2d 203 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 33 193 3.8E-12 T 15-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component THII_0600 e6fd55dadc97c18e0e224ac885d16b2d 203 Gene3D G3DSA:3.40.50.10610 21 203 8.0E-40 T 15-10-2018 THII_0600 e6fd55dadc97c18e0e224ac885d16b2d 203 SUPERFAMILY SSF159594 30 201 1.36E-35 T 15-10-2018 THII_3100 649606482f392e841f120a767716bf6f 248 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 200 228 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 THII_3100 649606482f392e841f120a767716bf6f 248 Gene3D G3DSA:2.160.10.10 2 76 1.2E-11 T 15-10-2018 THII_3100 649606482f392e841f120a767716bf6f 248 SUPERFAMILY SSF51161 8 247 1.25E-49 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_3100 649606482f392e841f120a767716bf6f 248 PIRSF PIRSF000441 7 49 0.16 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 THII_3100 649606482f392e841f120a767716bf6f 248 PIRSF PIRSF000441 137 248 1.1E-15 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 THII_3100 649606482f392e841f120a767716bf6f 248 PIRSF PIRSF000441 44 93 0.15 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 THII_3100 649606482f392e841f120a767716bf6f 248 PIRSF PIRSF000441 74 168 9.5E-10 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 THII_3100 649606482f392e841f120a767716bf6f 248 Gene3D G3DSA:2.160.10.10 77 247 1.1E-44 T 15-10-2018 THII_3100 649606482f392e841f120a767716bf6f 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 192 225 6.6E-8 T 15-10-2018 IPR001451 Hexapeptide repeat THII_3100 649606482f392e841f120a767716bf6f 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 18 50 5.3E-9 T 15-10-2018 IPR001451 Hexapeptide repeat THII_3100 649606482f392e841f120a767716bf6f 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 104 138 1.5E-8 T 15-10-2018 IPR001451 Hexapeptide repeat THII_3100 649606482f392e841f120a767716bf6f 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 171 5.8E-6 T 15-10-2018 IPR001451 Hexapeptide repeat THII_0490 9f6fe9b8000fa2a76f31116c895feaab 502 SUPERFAMILY SSF50969 54 363 5.81E-6 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like THII_0490 9f6fe9b8000fa2a76f31116c895feaab 502 SUPERFAMILY SSF51004 329 486 2.88E-13 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily THII_0490 9f6fe9b8000fa2a76f31116c895feaab 502 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 31 3.9E-6 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THII_0490 9f6fe9b8000fa2a76f31116c895feaab 502 Gene3D G3DSA:2.130.10.10 315 492 1.2E-12 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_3609 f45205747ddf3a4b1e0a7b96ab9a3723 187 SUPERFAMILY SSF52980 16 185 4.99E-13 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3609 f45205747ddf3a4b1e0a7b96ab9a3723 187 Pfam PF05685 Putative restriction endonuclease 33 172 2.4E-24 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3609 f45205747ddf3a4b1e0a7b96ab9a3723 187 Gene3D G3DSA:3.90.1570.10 14 186 1.3E-13 T 15-10-2018 THII_2578 d861111b769b85caa874e4046329bfc4 454 Gene3D G3DSA:1.10.287.730 144 170 1.1E-6 T 15-10-2018 THII_2578 d861111b769b85caa874e4046329bfc4 454 Pfam PF01029 NusB family 2 124 1.2E-22 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 THII_2578 d861111b769b85caa874e4046329bfc4 454 Pfam PF01189 16S rRNA methyltransferase RsmB/F 265 450 3.5E-60 T 15-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 THII_2578 d861111b769b85caa874e4046329bfc4 454 Gene3D G3DSA:1.10.940.10 1 143 3.2E-41 T 15-10-2018 IPR035926 NusB-like superfamily THII_2578 d861111b769b85caa874e4046329bfc4 454 SUPERFAMILY SSF53335 136 452 2.37E-67 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2578 d861111b769b85caa874e4046329bfc4 454 Gene3D G3DSA:3.30.70.1170 171 216 2.0E-5 T 15-10-2018 THII_2578 d861111b769b85caa874e4046329bfc4 454 SUPERFAMILY SSF48013 1 147 4.09E-31 T 15-10-2018 IPR035926 NusB-like superfamily THII_2578 d861111b769b85caa874e4046329bfc4 454 Gene3D G3DSA:3.40.50.150 250 453 9.0E-62 T 15-10-2018 THII_2578 d861111b769b85caa874e4046329bfc4 454 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 452 4.8E-117 T 15-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 THII_2578 d861111b769b85caa874e4046329bfc4 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 241 255 3.0E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase THII_2578 d861111b769b85caa874e4046329bfc4 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 270 280 3.0E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase THII_2578 d861111b769b85caa874e4046329bfc4 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 337 349 3.0E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase THII_2578 d861111b769b85caa874e4046329bfc4 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 387 403 3.0E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase THII_2578 d861111b769b85caa874e4046329bfc4 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 435 452 3.0E-28 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase THII_0574 b358710e7bb00749dcfa3e8c03988058 317 TIGRFAM TIGR02590 cas_Csh2: CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI 9 300 2.8E-59 T 15-10-2018 IPR013419 CRISPR-associated protein Csh2 THII_0574 b358710e7bb00749dcfa3e8c03988058 317 Pfam PF05107 CRISPR-associated protein Cas7 9 270 8.7E-47 T 15-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C THII_2541 029a44d0245548f0145d6b2f1a0064b5 315 SUPERFAMILY SSF51261 144 292 1.62E-54 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_2541 029a44d0245548f0145d6b2f1a0064b5 315 Gene3D G3DSA:2.70.70.10 145 297 4.8E-48 T 15-10-2018 IPR011055 Duplicated hybrid motif THII_2541 029a44d0245548f0145d6b2f1a0064b5 315 Pfam PF01551 Peptidase family M23 193 288 4.0E-32 T 15-10-2018 IPR016047 Peptidase M23 THII_3718 4237714de11a925302bc81b7b544e268 438 SUPERFAMILY SSF52266 181 434 1.34E-14 T 15-10-2018 THII_1992 d2429db115a2b84fdabe0aff73506a32 236 SMART SM00706 4 40 140.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_1992 d2429db115a2b84fdabe0aff73506a32 236 SMART SM00706 41 75 1.1E-8 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_1992 d2429db115a2b84fdabe0aff73506a32 236 SMART SM00706 77 111 1.4E-9 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_1992 d2429db115a2b84fdabe0aff73506a32 236 SMART SM00706 112 146 4.8E-8 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_1992 d2429db115a2b84fdabe0aff73506a32 236 SMART SM00706 182 216 4.1E-6 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_1992 d2429db115a2b84fdabe0aff73506a32 236 SMART SM00706 147 181 6.9E-8 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_1992 d2429db115a2b84fdabe0aff73506a32 236 SUPERFAMILY SSF63829 26 211 4.8E-5 T 15-10-2018 THII_2412 7c1f92c1b3b431ce5185f75ffbafcccc 147 Gene3D G3DSA:1.20.1220.20 2 146 1.7E-32 T 15-10-2018 THII_2412 7c1f92c1b3b431ce5185f75ffbafcccc 147 Pfam PF01724 Domain of unknown function DUF29 7 143 1.1E-50 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1991 2238831842426f6f195df5e26219afe9 312 SUPERFAMILY SSF101478 2 304 2.35E-72 T 15-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily THII_1991 2238831842426f6f195df5e26219afe9 312 Pfam PF03747 ADP-ribosylglycohydrolase 9 284 1.9E-65 T 15-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 THII_1991 2238831842426f6f195df5e26219afe9 312 Gene3D G3DSA:1.10.4080.10 3 310 6.4E-97 T 15-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily THII_1333 4671546ca1a00edd3996faca406597c5 247 Gene3D G3DSA:3.20.20.70 1 241 3.9E-82 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_1333 4671546ca1a00edd3996faca406597c5 247 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 34.934 T 15-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 THII_1333 4671546ca1a00edd3996faca406597c5 247 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 234 1.5E-75 T 15-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 THII_1333 4671546ca1a00edd3996faca406597c5 247 SUPERFAMILY SSF51366 1 238 2.43E-71 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 THII_1333 4671546ca1a00edd3996faca406597c5 247 Pfam PF00977 Histidine biosynthesis protein 3 231 2.8E-76 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 THII_3850 cce171121338b827ed7a7865b03c1297 129 Pfam PF00380 Ribosomal protein S9/S16 9 129 2.0E-46 T 15-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 THII_3850 cce171121338b827ed7a7865b03c1297 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 15-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 THII_3850 cce171121338b827ed7a7865b03c1297 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 30.728 T 15-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid THII_3850 cce171121338b827ed7a7865b03c1297 129 SUPERFAMILY SSF54211 4 129 1.06E-48 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_3850 cce171121338b827ed7a7865b03c1297 129 Gene3D G3DSA:3.30.230.10 1 129 1.2E-53 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_2114 cce171121338b827ed7a7865b03c1297 129 Pfam PF00380 Ribosomal protein S9/S16 9 129 2.0E-46 T 15-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 THII_2114 cce171121338b827ed7a7865b03c1297 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 15-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 THII_2114 cce171121338b827ed7a7865b03c1297 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 30.728 T 15-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid THII_2114 cce171121338b827ed7a7865b03c1297 129 SUPERFAMILY SSF54211 4 129 1.06E-48 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_2114 cce171121338b827ed7a7865b03c1297 129 Gene3D G3DSA:3.30.230.10 1 129 1.2E-53 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THII_1629 cac2478090ca070a12c4a55325a6fbd9 961 Pfam PF00691 OmpA family 843 914 1.3E-9 T 15-10-2018 IPR006665 OmpA-like domain THII_1629 cac2478090ca070a12c4a55325a6fbd9 961 SUPERFAMILY SSF103088 828 917 2.35E-14 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_1629 cac2478090ca070a12c4a55325a6fbd9 961 PRINTS PR01021 OMPA domain signature 873 888 9.2E-5 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_1629 cac2478090ca070a12c4a55325a6fbd9 961 PRINTS PR01021 OMPA domain signature 888 904 9.2E-5 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_1629 cac2478090ca070a12c4a55325a6fbd9 961 Gene3D G3DSA:3.30.1330.60 831 952 6.3E-13 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_1629 cac2478090ca070a12c4a55325a6fbd9 961 Gene3D G3DSA:1.20.5.340 90 182 2.5E-5 T 15-10-2018 THII_0360 ea1ebf944c7471113a5bfd6b8d9bec39 247 SUPERFAMILY SSF53448 8 242 9.6E-60 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0360 ea1ebf944c7471113a5bfd6b8d9bec39 247 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 243 1.4E-66 T 15-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 THII_0360 ea1ebf944c7471113a5bfd6b8d9bec39 247 Gene3D G3DSA:3.90.550.10 4 246 1.3E-73 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0360 ea1ebf944c7471113a5bfd6b8d9bec39 247 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 240 1.7E-67 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 THII_0360 ea1ebf944c7471113a5bfd6b8d9bec39 247 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 15-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 THII_0360 ea1ebf944c7471113a5bfd6b8d9bec39 247 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 241 42.022 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 THII_0353 0851f8e8569e0dbc82e0234556bb7328 291 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 4 280 2.9E-140 T 15-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 THII_0353 0851f8e8569e0dbc82e0234556bb7328 291 SUPERFAMILY SSF56317 1 282 1.06E-85 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily THII_0353 0851f8e8569e0dbc82e0234556bb7328 291 Gene3D G3DSA:3.60.110.10 1 291 1.0E-110 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily THII_0353 0851f8e8569e0dbc82e0234556bb7328 291 Pfam PF00795 Carbon-nitrogen hydrolase 5 265 2.3E-59 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 THII_2988 b40a9c8135e118e624dd6fb16e9386b6 323 Gene3D G3DSA:3.40.50.720 4 312 1.3E-58 T 15-10-2018 THII_2988 b40a9c8135e118e624dd6fb16e9386b6 323 SUPERFAMILY SSF51735 99 290 3.82E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_2988 b40a9c8135e118e624dd6fb16e9386b6 323 Gene3D G3DSA:3.40.50.720 97 290 1.3E-58 T 15-10-2018 THII_2988 b40a9c8135e118e624dd6fb16e9386b6 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 290 9.6E-36 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 THII_2035 930dd6ad76efbae71b14eb542e8051d6 134 Gene3D G3DSA:1.20.120.330 1 134 1.5E-39 T 15-10-2018 THII_2035 930dd6ad76efbae71b14eb542e8051d6 134 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 5 131 1.0E-22 T 15-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 THII_2035 930dd6ad76efbae71b14eb542e8051d6 134 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 3 131 1.3E-32 T 15-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 THII_2035 930dd6ad76efbae71b14eb542e8051d6 134 SUPERFAMILY SSF81593 2 130 1.77E-30 T 15-10-2018 THII_2076 1bc8381c6d76cabc6acb16fd65eddb73 291 Gene3D G3DSA:3.30.700.10 20 132 4.6E-5 T 15-10-2018 THII_2076 1bc8381c6d76cabc6acb16fd65eddb73 291 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2076 1bc8381c6d76cabc6acb16fd65eddb73 291 SUPERFAMILY SSF54523 7 121 1.83E-6 T 15-10-2018 THII_2076 1bc8381c6d76cabc6acb16fd65eddb73 291 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 5.3E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2586 ccd13f261760c53d5ee76228dc29d111 389 Gene3D G3DSA:1.10.260.40 3 65 4.0E-6 T 15-10-2018 THII_3302 2172d3cb7cad4c4ba708b42b8db7c669 172 SUPERFAMILY SSF81342 4 171 2.12E-26 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 THII_3302 2172d3cb7cad4c4ba708b42b8db7c669 172 Pfam PF01292 Prokaryotic cytochrome b561 6 171 1.8E-22 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 THII_3932 d1674987e3e495a4ba44e2b03394cefc 189 Pfam PF04351 Pilus assembly protein, PilP 32 185 2.1E-31 T 15-10-2018 IPR007446 Pilus assembly protein PilP THII_3932 d1674987e3e495a4ba44e2b03394cefc 189 Gene3D G3DSA:2.30.30.830 89 186 2.9E-25 T 15-10-2018 THII_2781 4c5db442280cc84786c0fcbb974980c7 577 Gene3D G3DSA:3.30.1120.10 353 431 1.1E-16 T 15-10-2018 THII_2781 4c5db442280cc84786c0fcbb974980c7 577 Gene3D G3DSA:3.40.720.10 1 351 4.7E-76 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 THII_2781 4c5db442280cc84786c0fcbb974980c7 577 SUPERFAMILY SSF53649 2 423 3.2E-85 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 THII_2781 4c5db442280cc84786c0fcbb974980c7 577 Pfam PF00884 Sulfatase 2 323 2.1E-34 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 THII_0411 3028c527ccd37f830af8b28171706580 643 PIRSF PIRSF002583 2 638 1.6E-217 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 THII_0411 3028c527ccd37f830af8b28171706580 643 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 15-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 THII_0411 3028c527ccd37f830af8b28171706580 643 SMART SM00387 30 187 1.3E-10 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0411 3028c527ccd37f830af8b28171706580 643 Pfam PF00183 Hsp90 protein 220 629 3.0E-135 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 THII_0411 3028c527ccd37f830af8b28171706580 643 SUPERFAMILY SSF54211 236 491 2.65E-98 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_0411 3028c527ccd37f830af8b28171706580 643 PRINTS PR00775 90kDa heat shock protein signature 8 28 1.0E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal THII_0411 3028c527ccd37f830af8b28171706580 643 PRINTS PR00775 90kDa heat shock protein signature 175 192 1.0E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal THII_0411 3028c527ccd37f830af8b28171706580 643 PRINTS PR00775 90kDa heat shock protein signature 29 51 1.0E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal THII_0411 3028c527ccd37f830af8b28171706580 643 PRINTS PR00775 90kDa heat shock protein signature 193 211 1.0E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal THII_0411 3028c527ccd37f830af8b28171706580 643 PRINTS PR00775 90kDa heat shock protein signature 96 113 1.0E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal THII_0411 3028c527ccd37f830af8b28171706580 643 PRINTS PR00775 90kDa heat shock protein signature 78 95 1.0E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal THII_0411 3028c527ccd37f830af8b28171706580 643 PRINTS PR00775 90kDa heat shock protein signature 123 145 1.0E-61 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal THII_0411 3028c527ccd37f830af8b28171706580 643 Gene3D G3DSA:3.30.565.10 1 234 2.0E-75 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_0411 3028c527ccd37f830af8b28171706580 643 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 186 3.4E-13 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_0411 3028c527ccd37f830af8b28171706580 643 Gene3D G3DSA:1.20.120.790 498 631 7.4E-46 T 15-10-2018 IPR037196 HSP90, C-terminal domain THII_0411 3028c527ccd37f830af8b28171706580 643 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 630 32.93 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 THII_0411 3028c527ccd37f830af8b28171706580 643 Gene3D G3DSA:3.30.230.80 235 402 7.2E-69 T 15-10-2018 THII_0411 3028c527ccd37f830af8b28171706580 643 Gene3D G3DSA:3.40.50.11260 403 492 1.3E-33 T 15-10-2018 THII_0411 3028c527ccd37f830af8b28171706580 643 SUPERFAMILY SSF110942 517 629 1.18E-38 T 15-10-2018 IPR037196 HSP90, C-terminal domain THII_0411 3028c527ccd37f830af8b28171706580 643 SUPERFAMILY SSF55874 8 213 2.36E-66 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3797 fad34ec36052a480844b88ae1099422e 156 SUPERFAMILY SSF47240 6 151 4.71E-26 T 15-10-2018 IPR009078 Ferritin-like superfamily THII_3797 fad34ec36052a480844b88ae1099422e 156 Pfam PF13668 Ferritin-like domain 99 149 4.1E-5 T 15-10-2018 THII_3797 fad34ec36052a480844b88ae1099422e 156 Gene3D G3DSA:1.20.1260.10 2 152 7.0E-45 T 15-10-2018 IPR012347 Ferritin-like THII_1640 597d86c606c36f45cf3bbaa4c88e55a9 210 SUPERFAMILY SSF52540 5 181 7.59E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1640 597d86c606c36f45cf3bbaa4c88e55a9 210 Gene3D G3DSA:3.40.50.300 2 187 1.8E-8 T 15-10-2018 THII_0413 3de4aa686638bbfc3c8fb7ff47c8c765 178 SUPERFAMILY SSF55811 1 165 1.76E-36 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 THII_0413 3de4aa686638bbfc3c8fb7ff47c8c765 178 Gene3D G3DSA:3.90.79.10 37 177 5.9E-39 T 15-10-2018 THII_0413 3de4aa686638bbfc3c8fb7ff47c8c765 178 Pfam PF14803 Nudix N-terminal 2 36 2.3E-11 T 15-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 THII_0413 3de4aa686638bbfc3c8fb7ff47c8c765 178 Gene3D G3DSA:2.20.70.10 1 36 2.6E-14 T 15-10-2018 THII_0413 3de4aa686638bbfc3c8fb7ff47c8c765 178 Pfam PF00293 NUDIX domain 49 145 1.7E-13 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 THII_3947 f5a9101eb98ccb06dc11e9669bd8c99e 191 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 170 6.2E-27 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 THII_3947 f5a9101eb98ccb06dc11e9669bd8c99e 191 Gene3D G3DSA:3.40.80.10 4 183 1.6E-58 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 THII_3947 f5a9101eb98ccb06dc11e9669bd8c99e 191 SUPERFAMILY SSF55846 6 181 3.53E-64 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 THII_3947 f5a9101eb98ccb06dc11e9669bd8c99e 191 SMART SM00644 18 169 5.9E-47 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 THII_1308 499d9efeb33222ba4d67bf93fb141d4b 441 SMART SM00507 194 245 3.1E-10 T 15-10-2018 IPR003615 HNH nuclease THII_1308 499d9efeb33222ba4d67bf93fb141d4b 441 Pfam PF14239 RRXRR protein 3 188 4.1E-66 T 15-10-2018 IPR025938 RRXRR domain THII_1308 499d9efeb33222ba4d67bf93fb141d4b 441 Gene3D G3DSA:3.30.40.60 173 302 3.4E-15 T 15-10-2018 THII_1308 499d9efeb33222ba4d67bf93fb141d4b 441 Pfam PF14279 HNH endonuclease 207 250 1.1E-12 T 15-10-2018 IPR029471 HNH endonuclease 5 THII_2261 5689092347e07d602f8e46555de42ca8 731 Pfam PF03958 Bacterial type II/III secretion system short domain 305 411 2.4E-10 T 15-10-2018 IPR005644 NolW-like THII_2261 5689092347e07d602f8e46555de42ca8 731 Pfam PF00263 Bacterial type II and III secretion system protein 497 670 1.7E-40 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 THII_2261 5689092347e07d602f8e46555de42ca8 731 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 68 678 2.7E-112 T 15-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 THII_2261 5689092347e07d602f8e46555de42ca8 731 PRINTS PR00811 Bacterial general secretion pathway protein D signature 415 425 3.3E-8 T 15-10-2018 IPR001775 GspD/PilQ family THII_2261 5689092347e07d602f8e46555de42ca8 731 PRINTS PR00811 Bacterial general secretion pathway protein D signature 491 515 3.3E-8 T 15-10-2018 IPR001775 GspD/PilQ family THII_2261 5689092347e07d602f8e46555de42ca8 731 PRINTS PR00811 Bacterial general secretion pathway protein D signature 634 652 3.3E-8 T 15-10-2018 IPR001775 GspD/PilQ family THII_2261 5689092347e07d602f8e46555de42ca8 731 Gene3D G3DSA:3.30.1370.120 65 222 7.4E-20 T 15-10-2018 IPR038591 NolW-like superfamily THII_0470 1b0ca05ccf9c6d91b79b0b0a151cb487 189 SUPERFAMILY SSF53448 1 186 3.38E-23 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0470 1b0ca05ccf9c6d91b79b0b0a151cb487 189 Pfam PF12804 MobA-like NTP transferase domain 5 162 6.8E-36 T 15-10-2018 IPR025877 MobA-like NTP transferase THII_0470 1b0ca05ccf9c6d91b79b0b0a151cb487 189 Gene3D G3DSA:3.90.550.10 2 189 8.2E-45 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2383 58795fa302efe0e7667408b143f458f7 469 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 34 59 1.8E-8 T 15-10-2018 IPR026457 CSLREA domain THII_2383 58795fa302efe0e7667408b143f458f7 469 SUPERFAMILY SSF51126 25 359 5.59E-31 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_1279 ff3b040aa1cbcce8d1bdf36f0154cbe6 329 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 40 113 7.1E-20 T 15-10-2018 IPR020012 Motility protein FimV, N-terminal THII_1111 3287a1f5530aed978b1ee76f16e3bb7d 199 Pfam PF14103 Domain of unknown function (DUF4276) 6 185 2.3E-9 T 15-10-2018 IPR025455 Protein of unknown function DUF4276 THII_3386 9c5a43988583388a39d27c052e777fcd 367 Gene3D G3DSA:3.90.1150.10 26 359 5.7E-116 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_3386 9c5a43988583388a39d27c052e777fcd 367 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 366 61.838 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 THII_3386 9c5a43988583388a39d27c052e777fcd 367 SUPERFAMILY SSF53383 18 366 2.5E-82 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_3386 9c5a43988583388a39d27c052e777fcd 367 Gene3D G3DSA:3.40.640.10 49 274 5.7E-116 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_3386 9c5a43988583388a39d27c052e777fcd 367 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 226 235 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 THII_3386 9c5a43988583388a39d27c052e777fcd 367 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 365 2.5E-115 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 THII_3386 9c5a43988583388a39d27c052e777fcd 367 Pfam PF00155 Aminotransferase class I and II 35 362 3.8E-57 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 THII_1284 daf88575c28ded5b79718a4032fcd8b6 559 SUPERFAMILY SSF47226 6 127 9.81E-13 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 THII_1744 7158dc78f386989c82414e8cae6714e3 188 SUPERFAMILY SSF55194 5 188 9.42E-72 T 15-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 THII_1744 7158dc78f386989c82414e8cae6714e3 188 Pfam PF01765 Ribosome recycling factor 23 186 3.1E-62 T 15-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 THII_1744 7158dc78f386989c82414e8cae6714e3 188 Hamap MF_00040 Ribosome-recycling factor [frr]. 6 188 27.456 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 THII_1744 7158dc78f386989c82414e8cae6714e3 188 TIGRFAM TIGR00496 frr: ribosome recycling factor 13 188 6.9E-72 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 THII_1744 7158dc78f386989c82414e8cae6714e3 188 Gene3D G3DSA:1.10.132.20 15 185 1.7E-67 T 15-10-2018 THII_1744 7158dc78f386989c82414e8cae6714e3 188 Gene3D G3DSA:3.30.1360.40 34 108 1.7E-67 T 15-10-2018 THII_3829 be6131342c8c4a720e47ddcdd6bd1fd8 174 SUPERFAMILY SSF52833 39 174 2.5E-38 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_3829 be6131342c8c4a720e47ddcdd6bd1fd8 174 Pfam PF00578 AhpC/TSA family 40 153 6.7E-24 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 THII_3829 be6131342c8c4a720e47ddcdd6bd1fd8 174 Gene3D G3DSA:3.40.30.10 31 174 5.5E-43 T 15-10-2018 THII_2977 5b618ea9fe4e3003ee770bcb5cb88912 572 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 386 400 - T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_2977 5b618ea9fe4e3003ee770bcb5cb88912 572 Gene3D G3DSA:3.40.50.300 294 570 1.1E-110 T 15-10-2018 THII_2977 5b618ea9fe4e3003ee770bcb5cb88912 572 SUPERFAMILY SSF160246 14 157 5.75E-18 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily THII_2977 5b618ea9fe4e3003ee770bcb5cb88912 572 Gene3D G3DSA:3.30.450.90 160 290 1.5E-45 T 15-10-2018 THII_2977 5b618ea9fe4e3003ee770bcb5cb88912 572 Pfam PF00437 Type II/IV secretion system protein 192 458 3.2E-82 T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_2977 5b618ea9fe4e3003ee770bcb5cb88912 572 SMART SM00382 319 440 2.4E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_2977 5b618ea9fe4e3003ee770bcb5cb88912 572 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 52 163 6.8E-10 T 15-10-2018 IPR007831 General secretory system II, protein E, N-terminal THII_2977 5b618ea9fe4e3003ee770bcb5cb88912 572 SUPERFAMILY SSF52540 175 568 2.76E-105 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2310 b9b94442f9187e571a3139d62080b496 200 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 28 183 1.6E-33 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 THII_2310 b9b94442f9187e571a3139d62080b496 200 Pfam PF03550 Outer membrane lipoprotein LolB 31 182 2.3E-44 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 THII_2310 b9b94442f9187e571a3139d62080b496 200 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 184 20.647 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 THII_2310 b9b94442f9187e571a3139d62080b496 200 SUPERFAMILY SSF89392 15 184 2.08E-40 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX THII_2310 b9b94442f9187e571a3139d62080b496 200 Gene3D G3DSA:2.50.20.10 25 185 9.4E-49 T 15-10-2018 THII_3892 af0648783a06bb0c352ba71290d2e973 271 Gene3D G3DSA:3.10.450.50 225 263 7.0E-9 T 15-10-2018 THII_3892 af0648783a06bb0c352ba71290d2e973 271 Pfam PF02810 SEC-C motif 244 261 1.8E-9 T 15-10-2018 IPR004027 SEC-C motif THII_3892 af0648783a06bb0c352ba71290d2e973 271 Gene3D G3DSA:1.25.10.10 56 198 2.8E-7 T 15-10-2018 IPR011989 Armadillo-like helical THII_3892 af0648783a06bb0c352ba71290d2e973 271 SUPERFAMILY SSF48371 68 153 3.55E-5 T 15-10-2018 IPR016024 Armadillo-type fold THII_3892 af0648783a06bb0c352ba71290d2e973 271 SUPERFAMILY SSF103642 242 262 2.62E-8 T 15-10-2018 THII_3275 f9f35fa7a4399aa930c82bb19d2e3e3b 130 Pfam PF03130 PBS lyase HEAT-like repeat 92 113 0.013 T 15-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 THII_3275 f9f35fa7a4399aa930c82bb19d2e3e3b 130 Gene3D G3DSA:1.25.10.10 45 130 6.9E-9 T 15-10-2018 IPR011989 Armadillo-like helical THII_3275 f9f35fa7a4399aa930c82bb19d2e3e3b 130 SUPERFAMILY SSF48371 84 130 2.62E-7 T 15-10-2018 IPR016024 Armadillo-type fold THII_3913 302f571f825421fa67aff5c4987b884c 294 Gene3D G3DSA:4.10.1080.10 51 166 3.4E-7 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3913 302f571f825421fa67aff5c4987b884c 294 SUPERFAMILY SSF103088 176 288 6.93E-35 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_3913 302f571f825421fa67aff5c4987b884c 294 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 15-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 THII_3913 302f571f825421fa67aff5c4987b884c 294 Pfam PF00691 OmpA family 187 282 3.7E-24 T 15-10-2018 IPR006665 OmpA-like domain THII_3913 302f571f825421fa67aff5c4987b884c 294 Gene3D G3DSA:3.30.1330.60 167 294 9.4E-39 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_3913 302f571f825421fa67aff5c4987b884c 294 Pfam PF02412 Thrombospondin type 3 repeat 141 161 0.0033 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3913 302f571f825421fa67aff5c4987b884c 294 Pfam PF02412 Thrombospondin type 3 repeat 112 127 0.02 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3913 302f571f825421fa67aff5c4987b884c 294 SUPERFAMILY SSF103647 67 161 1.14E-13 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3913 302f571f825421fa67aff5c4987b884c 294 PRINTS PR01021 OMPA domain signature 188 210 1.3E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_3913 302f571f825421fa67aff5c4987b884c 294 PRINTS PR01021 OMPA domain signature 218 233 1.3E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_3913 302f571f825421fa67aff5c4987b884c 294 PRINTS PR01021 OMPA domain signature 233 249 1.3E-18 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 THII_3346 da1376ed34b496cb61d195e61902163b 256 Gene3D G3DSA:3.40.190.10 33 250 8.9E-19 T 15-10-2018 THII_3346 da1376ed34b496cb61d195e61902163b 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 251 1.3E-17 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THII_3346 da1376ed34b496cb61d195e61902163b 256 SUPERFAMILY SSF53850 24 250 2.78E-27 T 15-10-2018 THII_3346 da1376ed34b496cb61d195e61902163b 256 Gene3D G3DSA:3.40.190.10 107 210 8.9E-19 T 15-10-2018 THII_2376 5eb28ae274dcb16a194756800c444ff0 298 Gene3D G3DSA:2.60.40.10 192 283 9.0E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1939 51fde125a34641bc44ed10076dcd7e62 68 Pfam PF04255 Protein of unknown function (DUF433) 7 60 1.2E-17 T 15-10-2018 IPR007367 Protein of unknown function DUF433 THII_1939 51fde125a34641bc44ed10076dcd7e62 68 SUPERFAMILY SSF46689 4 59 3.05E-14 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_1939 51fde125a34641bc44ed10076dcd7e62 68 Gene3D G3DSA:1.10.10.10 6 61 8.5E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_1798 49071b19c7baa0e668debd31cf773357 349 Gene3D G3DSA:3.40.50.300 127 332 7.7E-70 T 15-10-2018 THII_1798 49071b19c7baa0e668debd31cf773357 349 SUPERFAMILY SSF52540 129 307 6.19E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1798 49071b19c7baa0e668debd31cf773357 349 Pfam PF02562 PhoH-like protein 129 332 2.9E-92 T 15-10-2018 IPR003714 PhoH-like protein GO:0005524 THII_0783 4639cb80d0f387fd47bdab59980ae353 145 Gene3D G3DSA:1.20.1220.20 1 145 2.0E-33 T 15-10-2018 THII_0783 4639cb80d0f387fd47bdab59980ae353 145 Pfam PF01724 Domain of unknown function DUF29 5 141 6.9E-53 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0961 e8b9ea38bcedf17da13faa6232b6445d 366 Pfam PF02445 Quinolinate synthetase A protein 22 363 2.8E-103 T 15-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 THII_0961 e8b9ea38bcedf17da13faa6232b6445d 366 Hamap MF_00569 Quinolinate synthase A [nadA]. 15 364 49.351 T 15-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 THII_0961 e8b9ea38bcedf17da13faa6232b6445d 366 Gene3D G3DSA:3.40.50.10800 225 315 3.4E-80 T 15-10-2018 THII_0961 e8b9ea38bcedf17da13faa6232b6445d 366 Gene3D G3DSA:3.40.50.10800 104 362 3.4E-80 T 15-10-2018 THII_0961 e8b9ea38bcedf17da13faa6232b6445d 366 Gene3D G3DSA:3.40.50.10800 31 345 3.4E-80 T 15-10-2018 THII_0961 e8b9ea38bcedf17da13faa6232b6445d 366 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 18 365 6.6E-91 T 15-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 THII_0961 e8b9ea38bcedf17da13faa6232b6445d 366 SUPERFAMILY SSF142754 26 363 3.4E-94 T 15-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 THII_0338 9eb771e3550ca7bd79b9e05cce44843f 323 SUPERFAMILY SSF54862 87 279 2.09E-5 T 15-10-2018 THII_0338 9eb771e3550ca7bd79b9e05cce44843f 323 Pfam PF12801 4Fe-4S binding domain 73 116 5.2E-10 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0338 9eb771e3550ca7bd79b9e05cce44843f 323 Pfam PF12801 4Fe-4S binding domain 141 156 440.0 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_0338 9eb771e3550ca7bd79b9e05cce44843f 323 Pfam PF12801 4Fe-4S binding domain 189 216 5.8 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_1491 d22743c3fe05206def2998f41686c0bc 304 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 5 300 16.749 T 15-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 THII_1491 d22743c3fe05206def2998f41686c0bc 304 PIRSF PIRSF005355 1 303 1.7E-69 T 15-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 THII_1491 d22743c3fe05206def2998f41686c0bc 304 Pfam PF01040 UbiA prenyltransferase family 22 268 1.0E-31 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 THII_1491 d22743c3fe05206def2998f41686c0bc 304 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 14 291 8.2E-30 T 15-10-2018 THII_1424 60ea50c268ff5e13e8e5946e69bbd406 72 Gene3D G3DSA:2.40.50.140 2 70 2.1E-36 T 15-10-2018 THII_1424 60ea50c268ff5e13e8e5946e69bbd406 72 SMART SM00316 4 72 1.3E-6 T 15-10-2018 IPR022967 RNA-binding domain, S1 THII_1424 60ea50c268ff5e13e8e5946e69bbd406 72 SUPERFAMILY SSF50249 1 70 3.64E-29 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_1424 60ea50c268ff5e13e8e5946e69bbd406 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.6E-38 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 THII_1424 60ea50c268ff5e13e8e5946e69bbd406 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.4E-28 T 15-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 THII_1424 60ea50c268ff5e13e8e5946e69bbd406 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.16 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 THII_0680 a3672553900b5ffd800654680886535d 113 Gene3D G3DSA:1.20.120.330 1 113 4.0E-22 T 15-10-2018 THII_0055 0a95f727517a519ebc2ead2eeb9118a8 403 Gene3D G3DSA:3.40.50.2000 94 391 9.2E-58 T 15-10-2018 THII_0055 0a95f727517a519ebc2ead2eeb9118a8 403 SUPERFAMILY SSF53756 16 395 7.85E-68 T 15-10-2018 THII_0055 0a95f727517a519ebc2ead2eeb9118a8 403 Gene3D G3DSA:3.40.50.2000 207 385 9.2E-58 T 15-10-2018 THII_0055 0a95f727517a519ebc2ead2eeb9118a8 403 Pfam PF00534 Glycosyl transferases group 1 221 379 1.4E-33 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_1164 d5687024e24c7edfe0c35f78695a7516 125 Gene3D G3DSA:3.30.420.270 55 119 3.7E-7 T 15-10-2018 THII_1164 d5687024e24c7edfe0c35f78695a7516 125 Pfam PF02472 Biopolymer transport protein ExbD/TolR 6 122 5.0E-20 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 THII_1257 bfbb1f6bfa900f3d0d24543b3a6dfb1d 179 Gene3D G3DSA:2.60.450.10 54 179 4.6E-12 T 15-10-2018 THII_1257 bfbb1f6bfa900f3d0d24543b3a6dfb1d 179 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 3 176 3.3E-35 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 THII_1257 bfbb1f6bfa900f3d0d24543b3a6dfb1d 179 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 4 176 3.0E-35 T 15-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related THII_2282 28c364f6bde34f61351736515e778e49 133 Gene3D G3DSA:1.10.260.40 1 123 4.2E-17 T 15-10-2018 THII_2282 28c364f6bde34f61351736515e778e49 133 Pfam PF01381 Helix-turn-helix 7 61 9.5E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2282 28c364f6bde34f61351736515e778e49 133 SUPERFAMILY SSF47413 2 66 1.34E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_2282 28c364f6bde34f61351736515e778e49 133 SMART SM00530 6 61 3.8E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2121 a067b250f3220bc39c0d4fa59b57dbcd 148 Pfam PF13005 zinc-finger binding domain of transposase IS66 94 138 2.8E-6 T 15-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 THII_2300 a220bc2c0ff0930e032fb06c1df89a4a 364 Pfam PF13439 Glycosyltransferase Family 4 11 185 7.0E-8 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 THII_2300 a220bc2c0ff0930e032fb06c1df89a4a 364 Pfam PF00534 Glycosyl transferases group 1 196 342 7.9E-32 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_2300 a220bc2c0ff0930e032fb06c1df89a4a 364 Gene3D G3DSA:3.40.50.2000 1 199 8.1E-24 T 15-10-2018 THII_2300 a220bc2c0ff0930e032fb06c1df89a4a 364 SUPERFAMILY SSF53756 5 364 8.24E-75 T 15-10-2018 THII_2300 a220bc2c0ff0930e032fb06c1df89a4a 364 Gene3D G3DSA:3.40.50.2000 200 354 3.0E-40 T 15-10-2018 THII_2219 0db664b2e67217936c3dc21a428baf60 419 Gene3D G3DSA:3.40.47.10 4 418 1.9E-175 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2219 0db664b2e67217936c3dc21a428baf60 419 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 267 372 5.3E-10 T 15-10-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 THII_2219 0db664b2e67217936c3dc21a428baf60 419 Gene3D G3DSA:3.40.47.10 189 340 1.9E-175 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2219 0db664b2e67217936c3dc21a428baf60 419 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 4 178 3.0E-10 T 15-10-2018 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: R-HSA-1989781 THII_2219 0db664b2e67217936c3dc21a428baf60 419 SUPERFAMILY SSF53901 3 180 3.5E-31 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_2219 0db664b2e67217936c3dc21a428baf60 419 SUPERFAMILY SSF53901 186 418 7.68E-60 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 THII_1165 2b062058283f007d7f8f01b107b66146 143 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 4 139 6.5E-55 T 15-10-2018 IPR014172 TonB-system energizer ExbB type-2 GO:0016020|GO:0055085 THII_1165 2b062058283f007d7f8f01b107b66146 143 Pfam PF01618 MotA/TolQ/ExbB proton channel family 52 137 4.4E-26 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel THII_3351 c3b8a9e114228a86b833b6c79cf1a1de 319 Gene3D G3DSA:3.40.50.150 45 222 2.0E-50 T 15-10-2018 THII_3351 c3b8a9e114228a86b833b6c79cf1a1de 319 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 18 315 9.0E-126 T 15-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 THII_3351 c3b8a9e114228a86b833b6c79cf1a1de 319 PIRSF PIRSF018005 6 319 2.7E-116 T 15-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 THII_3351 c3b8a9e114228a86b833b6c79cf1a1de 319 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 19 317 2.6E-111 T 15-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent THII_3351 c3b8a9e114228a86b833b6c79cf1a1de 319 SUPERFAMILY SSF53335 29 316 5.12E-10 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0310 e3a30b108065815b3aaf7e698a9f7914 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.176 T 15-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 THII_0310 e3a30b108065815b3aaf7e698a9f7914 98 Gene3D G3DSA:3.30.70.330 1 98 6.6E-34 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily THII_0310 e3a30b108065815b3aaf7e698a9f7914 98 Pfam PF00276 Ribosomal protein L23 8 94 1.3E-29 T 15-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 THII_0310 e3a30b108065815b3aaf7e698a9f7914 98 SUPERFAMILY SSF54189 1 92 1.08E-30 T 15-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 THII_3237 0b5dc7f223dc6e7e0bc33e74ba78b688 180 Gene3D G3DSA:2.160.20.10 3 178 6.4E-14 T 15-10-2018 IPR012334 Pectin lyase fold THII_3237 0b5dc7f223dc6e7e0bc33e74ba78b688 180 SUPERFAMILY SSF51126 9 153 1.63E-7 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0253 bc5831739e3e0b9a5ab708b2b3e6e154 217 SUPERFAMILY SSF53474 10 214 1.16E-42 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_0253 bc5831739e3e0b9a5ab708b2b3e6e154 217 Gene3D G3DSA:3.40.50.1820 7 216 2.4E-54 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_0253 bc5831739e3e0b9a5ab708b2b3e6e154 217 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 21 106 1.2E-4 T 15-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 THII_1441 1fc4c69558423d16f3382779087ae362 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 496 509 6.0E-48 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_1441 1fc4c69558423d16f3382779087ae362 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 260 278 6.0E-48 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_1441 1fc4c69558423d16f3382779087ae362 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 464 482 6.0E-48 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_1441 1fc4c69558423d16f3382779087ae362 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 148 167 6.0E-48 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_1441 1fc4c69558423d16f3382779087ae362 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 482 496 6.0E-48 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_1441 1fc4c69558423d16f3382779087ae362 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 337 358 6.0E-48 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_1441 1fc4c69558423d16f3382779087ae362 550 Gene3D G3DSA:3.40.50.10490 96 290 2.2E-224 T 15-10-2018 THII_1441 1fc4c69558423d16f3382779087ae362 550 Gene3D G3DSA:3.40.50.10490 11 505 2.2E-224 T 15-10-2018 THII_1441 1fc4c69558423d16f3382779087ae362 550 SUPERFAMILY SSF53697 7 547 1.31E-201 T 15-10-2018 THII_1441 1fc4c69558423d16f3382779087ae362 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 44 523 39.985 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_1441 1fc4c69558423d16f3382779087ae362 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 264 277 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_1441 1fc4c69558423d16f3382779087ae362 550 Gene3D G3DSA:1.10.1390.10 506 547 8.0E-17 T 15-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_1441 1fc4c69558423d16f3382779087ae362 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 496 513 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_1441 1fc4c69558423d16f3382779087ae362 550 Pfam PF00342 Phosphoglucose isomerase 50 540 6.4E-214 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 THII_2355 807a0a38ef01e909f13ab068719a5c0a 301 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 286 1.1E-69 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 THII_2355 807a0a38ef01e909f13ab068719a5c0a 301 Pfam PF01545 Cation efflux family 10 203 3.9E-41 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 THII_2355 807a0a38ef01e909f13ab068719a5c0a 301 Gene3D G3DSA:3.30.70.1350 203 291 1.4E-28 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 THII_2355 807a0a38ef01e909f13ab068719a5c0a 301 Pfam PF16916 Dimerisation domain of Zinc Transporter 209 285 2.2E-21 T 15-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain THII_2355 807a0a38ef01e909f13ab068719a5c0a 301 SUPERFAMILY SSF160240 207 285 5.36E-20 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 THII_2355 807a0a38ef01e909f13ab068719a5c0a 301 SUPERFAMILY SSF161111 8 205 1.16E-54 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily THII_2355 807a0a38ef01e909f13ab068719a5c0a 301 Gene3D G3DSA:1.20.1510.10 6 202 6.3E-59 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily THII_3570 d3165b44e0381f6b20f59c3a1dcb5174 165 Pfam PF02470 MlaD protein 40 118 8.5E-24 T 15-10-2018 IPR003399 Mce/MlaD THII_3570 d3165b44e0381f6b20f59c3a1dcb5174 165 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 151 4.9E-53 T 15-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 THII_3224 82fe4f3b239fb241654e4c7c6e524cfc 148 Gene3D G3DSA:3.40.50.9100 1 147 3.5E-63 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 THII_3224 82fe4f3b239fb241654e4c7c6e524cfc 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 141 1.0E-54 T 15-10-2018 THII_3224 82fe4f3b239fb241654e4c7c6e524cfc 148 Pfam PF01220 Dehydroquinase class II 3 140 2.3E-59 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 THII_3224 82fe4f3b239fb241654e4c7c6e524cfc 148 SUPERFAMILY SSF52304 3 146 1.14E-60 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 THII_3224 82fe4f3b239fb241654e4c7c6e524cfc 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 69.807 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 THII_3224 82fe4f3b239fb241654e4c7c6e524cfc 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 15-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 THII_3224 82fe4f3b239fb241654e4c7c6e524cfc 148 PIRSF PIRSF001399 1 147 3.5E-57 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 THII_3224 82fe4f3b239fb241654e4c7c6e524cfc 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 141 1.3E-60 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 THII_3090 b84b76fb5f7d9fdac3fe195a99d07633 1808 Gene3D G3DSA:2.60.40.10 295 398 1.7E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3090 b84b76fb5f7d9fdac3fe195a99d07633 1808 Gene3D G3DSA:2.60.40.10 829 939 1.6E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3090 b84b76fb5f7d9fdac3fe195a99d07633 1808 Gene3D G3DSA:2.60.40.10 603 703 2.8E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3090 b84b76fb5f7d9fdac3fe195a99d07633 1808 Gene3D G3DSA:2.60.40.10 500 601 9.9E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3090 b84b76fb5f7d9fdac3fe195a99d07633 1808 Gene3D G3DSA:2.60.40.10 399 499 4.4E-14 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3090 b84b76fb5f7d9fdac3fe195a99d07633 1808 SUPERFAMILY SSF63829 100 285 8.5E-5 T 15-10-2018 THII_3090 b84b76fb5f7d9fdac3fe195a99d07633 1808 Pfam PF12371 Transmembrane protein 131-like 604 686 3.8E-7 T 15-10-2018 IPR022113 Transmembrane protein 131-like domain THII_2919 12272d120c1247af4befbd4bc365c0ae 250 Gene3D G3DSA:3.30.70.2970 40 145 1.1E-5 T 15-10-2018 THII_2919 12272d120c1247af4befbd4bc365c0ae 250 Pfam PF04402 Protein of unknown function (DUF541) 29 239 1.5E-20 T 15-10-2018 IPR007497 Protein of unknown function DUF541 THII_0379 70974c66e17bcccc135a2d2ffd353d25 422 Pfam PF00365 Phosphofructokinase 9 323 1.6E-44 T 15-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 THII_0379 70974c66e17bcccc135a2d2ffd353d25 422 SUPERFAMILY SSF53784 3 413 4.84E-108 T 15-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 THII_0379 70974c66e17bcccc135a2d2ffd353d25 422 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 136 153 5.1E-10 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 THII_0379 70974c66e17bcccc135a2d2ffd353d25 422 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 236 248 5.1E-10 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 THII_0379 70974c66e17bcccc135a2d2ffd353d25 422 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 194 5.1E-10 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 THII_0379 70974c66e17bcccc135a2d2ffd353d25 422 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 5.1E-10 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 THII_0379 70974c66e17bcccc135a2d2ffd353d25 422 PIRSF PIRSF036483 1 417 1.4E-202 T 15-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 THII_0379 70974c66e17bcccc135a2d2ffd353d25 422 Gene3D G3DSA:3.40.50.450 4 399 1.3E-152 T 15-10-2018 THII_0379 70974c66e17bcccc135a2d2ffd353d25 422 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 2 398 44.485 T 15-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 THII_0379 70974c66e17bcccc135a2d2ffd353d25 422 Gene3D G3DSA:3.40.50.460 141 386 1.3E-152 T 15-10-2018 THII_1644 f454165848a537343b882d07023cbad9 381 Pfam PF04230 Polysaccharide pyruvyl transferase 23 318 2.7E-36 T 15-10-2018 IPR007345 Polysaccharide pyruvyl transferase THII_3678 8f20c13fd896fef3f7280d45daae0b8c 491 SUPERFAMILY SSF48403 33 206 1.71E-34 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily THII_3678 8f20c13fd896fef3f7280d45daae0b8c 491 Gene3D G3DSA:1.25.40.20 23 275 2.8E-41 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily THII_3678 8f20c13fd896fef3f7280d45daae0b8c 491 SMART SM00248 77 106 0.017 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_3678 8f20c13fd896fef3f7280d45daae0b8c 491 SMART SM00248 177 206 1400.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_3678 8f20c13fd896fef3f7280d45daae0b8c 491 SMART SM00248 110 139 0.0011 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_3678 8f20c13fd896fef3f7280d45daae0b8c 491 SMART SM00248 144 173 5.4E-5 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 THII_3678 8f20c13fd896fef3f7280d45daae0b8c 491 Pfam PF12796 Ankyrin repeats (3 copies) 60 141 8.2E-11 T 15-10-2018 IPR020683 Ankyrin repeat-containing domain THII_3678 8f20c13fd896fef3f7280d45daae0b8c 491 Pfam PF12796 Ankyrin repeats (3 copies) 144 200 1.3E-6 T 15-10-2018 IPR020683 Ankyrin repeat-containing domain THII_0461 20609dfc90ed305210d60f38f0fb2657 282 SUPERFAMILY SSF102198 48 281 3.4E-52 T 15-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 THII_0461 20609dfc90ed305210d60f38f0fb2657 282 Gene3D G3DSA:3.50.30.50 34 282 2.5E-67 T 15-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 THII_0461 20609dfc90ed305210d60f38f0fb2657 282 Pfam PF04199 Putative cyclase 49 220 2.4E-31 T 15-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 THII_2245 566dae959a4685c518a1f1e5868f2c22 125 Gene3D G3DSA:3.30.420.470 1 124 9.8E-11 T 15-10-2018 THII_2245 566dae959a4685c518a1f1e5868f2c22 125 Pfam PF13358 DDE superfamily endonuclease 2 111 3.8E-20 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_1653 fccdb0cf40604550538c475a3ac7fde7 313 Pfam PF04230 Polysaccharide pyruvyl transferase 14 218 1.0E-8 T 15-10-2018 IPR007345 Polysaccharide pyruvyl transferase THII_0071 d47448ad1c80aac5b4a57391992d4dd1 586 Gene3D G3DSA:3.10.20.310 66 155 2.4E-22 T 15-10-2018 THII_0071 d47448ad1c80aac5b4a57391992d4dd1 586 Pfam PF08479 POTRA domain, ShlB-type 82 155 1.4E-16 T 15-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type THII_0071 d47448ad1c80aac5b4a57391992d4dd1 586 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 217 543 1.2E-27 T 15-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal THII_0071 d47448ad1c80aac5b4a57391992d4dd1 586 Gene3D G3DSA:2.40.160.50 202 584 1.7E-84 T 15-10-2018 THII_1272 184709375a6d1016f03863e40b561f72 422 Pfam PF03934 Type II secretion system (T2SS), protein K 110 215 2.6E-16 T 15-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 THII_1272 184709375a6d1016f03863e40b561f72 422 Gene3D G3DSA:1.10.40.60 144 243 4.4E-16 T 15-10-2018 IPR038072 GspK, central domain superfamily THII_1272 184709375a6d1016f03863e40b561f72 422 Gene3D G3DSA:1.10.40.60 244 286 4.4E-16 T 15-10-2018 IPR038072 GspK, central domain superfamily THII_1272 184709375a6d1016f03863e40b561f72 422 SUPERFAMILY SSF158544 136 215 2.04E-15 T 15-10-2018 IPR038072 GspK, central domain superfamily THII_1272 184709375a6d1016f03863e40b561f72 422 SUPERFAMILY SSF47781 236 293 5.56E-6 T 15-10-2018 IPR010994 RuvA domain 2-like THII_0556 da87637bcd46588dedfc8fbcfbdc533a 71 SUPERFAMILY SSF143100 4 57 1.7E-16 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like THII_0556 da87637bcd46588dedfc8fbcfbdc533a 71 Gene3D G3DSA:3.30.160.250 1 67 4.2E-25 T 15-10-2018 THII_0556 da87637bcd46588dedfc8fbcfbdc533a 71 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 5 56 5.3E-7 T 15-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system THII_0270 aa162e9490d9ddef9247ce9ba6bb0527 156 PRINTS PR00606 Class ID cytochrome C signature 44 57 6.8E-10 T 15-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 THII_0270 aa162e9490d9ddef9247ce9ba6bb0527 156 PRINTS PR00606 Class ID cytochrome C signature 117 127 6.8E-10 T 15-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 THII_0270 aa162e9490d9ddef9247ce9ba6bb0527 156 PRINTS PR00606 Class ID cytochrome C signature 59 72 6.8E-10 T 15-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 THII_0270 aa162e9490d9ddef9247ce9ba6bb0527 156 SUPERFAMILY SSF46626 17 129 2.29E-10 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0270 aa162e9490d9ddef9247ce9ba6bb0527 156 Gene3D G3DSA:1.10.760.10 45 128 2.7E-22 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0359 4a8c3963c9bb91565f5e07f50be3d60d 161 SUPERFAMILY SSF69765 1 158 9.55E-42 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 THII_0359 4a8c3963c9bb91565f5e07f50be3d60d 161 Gene3D G3DSA:3.30.1330.50 1 160 6.1E-45 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 THII_0359 4a8c3963c9bb91565f5e07f50be3d60d 161 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 3 159 22.626 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 THII_0359 4a8c3963c9bb91565f5e07f50be3d60d 161 Pfam PF02542 YgbB family 4 157 4.0E-39 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 THII_0359 4a8c3963c9bb91565f5e07f50be3d60d 161 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 40 55 - T 15-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 THII_0359 4a8c3963c9bb91565f5e07f50be3d60d 161 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 5 157 9.2E-45 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 THII_1918 33bf2df2fe4708702f9be0f3bd94fa5a 398 Pfam PF07690 Major Facilitator Superfamily 9 355 1.7E-19 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 THII_1918 33bf2df2fe4708702f9be0f3bd94fa5a 398 Gene3D G3DSA:1.20.1250.20 5 380 3.4E-29 T 15-10-2018 THII_1918 33bf2df2fe4708702f9be0f3bd94fa5a 398 SUPERFAMILY SSF103473 8 393 7.19E-35 T 15-10-2018 IPR036259 MFS transporter superfamily THII_3782 e8f8985cc133c8a4e10b0f29d3e594b1 182 Gene3D G3DSA:3.40.50.880 1 182 6.4E-53 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_3782 e8f8985cc133c8a4e10b0f29d3e594b1 182 SUPERFAMILY SSF52317 1 181 7.99E-51 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_3782 e8f8985cc133c8a4e10b0f29d3e594b1 182 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 178 2.8E-58 T 15-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 THII_3782 e8f8985cc133c8a4e10b0f29d3e594b1 182 Pfam PF01965 DJ-1/PfpI family 3 165 7.8E-47 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 THII_1313 77ac8c6eb142d1adc88362c7a6aa71f9 416 Pfam PF02687 FtsX-like permease family 303 409 5.0E-14 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 THII_1313 77ac8c6eb142d1adc88362c7a6aa71f9 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 416 1.4E-153 T 15-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 THII_1313 77ac8c6eb142d1adc88362c7a6aa71f9 416 Pfam PF12704 MacB-like periplasmic core domain 27 212 4.4E-18 T 15-10-2018 IPR025857 MacB-like periplasmic core domain THII_0022 bfbaad75deb9809cfe66a4f258573686 158 Pfam PF05685 Putative restriction endonuclease 11 133 9.0E-17 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0022 bfbaad75deb9809cfe66a4f258573686 158 SUPERFAMILY SSF52980 12 135 2.84E-21 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0022 bfbaad75deb9809cfe66a4f258573686 158 Gene3D G3DSA:3.90.1570.10 2 146 3.4E-22 T 15-10-2018 THII_3170 a918f2d247f941bfd51bb74e2a89d533 396 SMART SM00634 134 230 0.0015 T 15-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain THII_3170 a918f2d247f941bfd51bb74e2a89d533 396 Gene3D G3DSA:2.60.40.10 133 234 2.4E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3170 a918f2d247f941bfd51bb74e2a89d533 396 Gene3D G3DSA:2.60.40.10 22 124 5.7E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3170 a918f2d247f941bfd51bb74e2a89d533 396 SUPERFAMILY SSF49373 137 232 1.15E-9 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3170 a918f2d247f941bfd51bb74e2a89d533 396 SUPERFAMILY SSF49373 29 126 1.2E-7 T 15-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments THII_3355 d35a1ea3df953781234eb817da32af1e 107 PIRSF PIRSF033490 1 106 1.6E-23 T 15-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 THII_3355 d35a1ea3df953781234eb817da32af1e 107 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 103 2.6E-25 T 15-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 THII_3355 d35a1ea3df953781234eb817da32af1e 107 Gene3D G3DSA:2.30.30.110 1 106 1.2E-27 T 15-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor THII_3355 d35a1ea3df953781234eb817da32af1e 107 SUPERFAMILY SSF50118 2 105 2.78E-31 T 15-10-2018 THII_1228 558de06017641bbef6afddc0f35378b4 355 Pfam PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) 3 280 1.3E-52 T 15-10-2018 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit THII_2229 a177208ec2c05b15bc7393268e437ecf 93 Pfam PF00589 Phage integrase family 7 91 1.5E-7 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 THII_2229 a177208ec2c05b15bc7393268e437ecf 93 Gene3D G3DSA:1.10.443.10 2 93 1.2E-11 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 THII_2229 a177208ec2c05b15bc7393268e437ecf 93 SUPERFAMILY SSF56349 3 90 2.88E-11 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 THII_3529 9b6aa47938040c68c6ea372e48d47c51 147 SMART SM00116 86 133 9.3E-5 T 15-10-2018 IPR000644 CBS domain THII_3529 9b6aa47938040c68c6ea372e48d47c51 147 SMART SM00116 11 59 2.2E-10 T 15-10-2018 IPR000644 CBS domain THII_3529 9b6aa47938040c68c6ea372e48d47c51 147 Gene3D G3DSA:3.10.580.10 1 147 2.5E-39 T 15-10-2018 THII_3529 9b6aa47938040c68c6ea372e48d47c51 147 SUPERFAMILY SSF54631 2 130 9.98E-31 T 15-10-2018 THII_3529 9b6aa47938040c68c6ea372e48d47c51 147 Pfam PF00571 CBS domain 4 57 1.7E-15 T 15-10-2018 IPR000644 CBS domain THII_3529 9b6aa47938040c68c6ea372e48d47c51 147 Pfam PF00571 CBS domain 82 131 2.5E-8 T 15-10-2018 IPR000644 CBS domain THII_2687 eb68ccf211bf6614d60e393239685224 144 SUPERFAMILY SSF46689 3 95 8.96E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_2687 eb68ccf211bf6614d60e393239685224 144 Pfam PF01710 Transposase 1 111 1.8E-10 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_3082 cf8a830a96feaad53e6b2476533b69fc 158 Pfam PF05685 Putative restriction endonuclease 13 137 1.2E-12 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3082 cf8a830a96feaad53e6b2476533b69fc 158 Gene3D G3DSA:3.90.1570.10 4 145 3.9E-16 T 15-10-2018 THII_3082 cf8a830a96feaad53e6b2476533b69fc 158 SUPERFAMILY SSF52980 12 130 1.23E-17 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1533 f3689e3efd1225c324cc9483e56cea70 230 Pfam PF01323 DSBA-like thioredoxin domain 56 194 4.0E-17 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 THII_1533 f3689e3efd1225c324cc9483e56cea70 230 PIRSF PIRSF001488 7 219 8.8E-49 T 15-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL THII_1533 f3689e3efd1225c324cc9483e56cea70 230 Gene3D G3DSA:3.40.30.10 35 220 4.2E-51 T 15-10-2018 THII_1533 f3689e3efd1225c324cc9483e56cea70 230 SUPERFAMILY SSF52833 47 214 2.4E-39 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_0020 d13c49336eee0e4a013edfc2c7868b6c 325 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 270 296 - T 15-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 THII_0020 d13c49336eee0e4a013edfc2c7868b6c 325 Pfam PF01148 Cytidylyltransferase family 44 311 9.5E-63 T 15-10-2018 THII_1348 6cbfcc6a840aa6203902f618426d45eb 145 Pfam PF01724 Domain of unknown function DUF29 7 142 7.4E-51 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1348 6cbfcc6a840aa6203902f618426d45eb 145 Gene3D G3DSA:1.20.1220.20 3 145 2.2E-31 T 15-10-2018 THII_0242 9c191d0f36e62991d70586dcaf228c06 298 SMART SM00046 2 129 1.1E-8 T 15-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 THII_0242 9c191d0f36e62991d70586dcaf228c06 298 Gene3D G3DSA:2.60.200.40 125 284 6.7E-34 T 15-10-2018 THII_0242 9c191d0f36e62991d70586dcaf228c06 298 Gene3D G3DSA:3.40.50.10330 1 124 6.2E-35 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 THII_0242 9c191d0f36e62991d70586dcaf228c06 298 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 123 4.0E-31 T 15-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 THII_0242 9c191d0f36e62991d70586dcaf228c06 298 SUPERFAMILY SSF111331 1 289 1.09E-71 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily THII_0242 9c191d0f36e62991d70586dcaf228c06 298 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 2 288 6.4E-43 T 15-10-2018 IPR005218 Diacylglycerol/lipid kinase THII_3832 eda0df184606b78517353775a113a499 1393 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 900 985 0.0011 T 15-10-2018 IPR010221 VCBS repeat THII_3832 eda0df184606b78517353775a113a499 1393 SUPERFAMILY SSF53300 88 304 2.07E-17 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_3832 eda0df184606b78517353775a113a499 1393 SMART SM00327 86 308 1.1E-7 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_3832 eda0df184606b78517353775a113a499 1393 Gene3D G3DSA:2.60.40.3440 1090 1159 3.9E-5 T 15-10-2018 THII_3832 eda0df184606b78517353775a113a499 1393 Gene3D G3DSA:2.60.40.3440 1188 1252 1.1E-5 T 15-10-2018 THII_2350 7415235ceb9cd588807594933d6c2b48 153 Gene3D G3DSA:1.20.1270.180 39 152 3.1E-16 T 15-10-2018 THII_2350 7415235ceb9cd588807594933d6c2b48 153 Pfam PF07007 Lysozyme inhibitor LprI 46 144 6.3E-16 T 15-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal THII_1433 3c21bb5d36f9b9e7200a82d07effde77 180 Pfam PF13511 Domain of unknown function (DUF4124) 11 61 2.1E-5 T 15-10-2018 IPR025392 Domain of unknown function DUF4124 THII_3820 bbc677201341d9a7c49be298ddacd80a 169 Pfam PF10973 Protein of unknown function (DUF2799) 15 99 8.5E-26 T 15-10-2018 IPR021242 Protein of unknown function DUF2799 THII_1328 e2cfff970f30aaa0ea6faf6261f50a61 458 Gene3D G3DSA:3.30.70.100 392 454 1.0E-7 T 15-10-2018 THII_1328 e2cfff970f30aaa0ea6faf6261f50a61 458 Gene3D G3DSA:1.20.1250.20 7 391 1.7E-85 T 15-10-2018 THII_1328 e2cfff970f30aaa0ea6faf6261f50a61 458 SUPERFAMILY SSF103473 13 391 1.24E-62 T 15-10-2018 IPR036259 MFS transporter superfamily THII_1328 e2cfff970f30aaa0ea6faf6261f50a61 458 Pfam PF07690 Major Facilitator Superfamily 26 355 8.7E-49 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 THII_0191 f72a320f7af5bdc5f5cd925b74642bfb 93 Gene3D G3DSA:3.30.70.100 2 92 9.6E-29 T 15-10-2018 THII_0191 f72a320f7af5bdc5f5cd925b74642bfb 93 Pfam PF00708 Acylphosphatase 8 92 7.8E-26 T 15-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 THII_0191 f72a320f7af5bdc5f5cd925b74642bfb 93 SUPERFAMILY SSF54975 3 92 2.18E-27 T 15-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 THII_0191 f72a320f7af5bdc5f5cd925b74642bfb 93 ProSitePatterns PS00150 Acylphosphatase signature 1. 11 21 - T 15-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 THII_2399 31bbd9124a67fc16b02d22ed630ec69f 568 Gene3D G3DSA:2.115.10.10 374 495 1.5E-5 T 15-10-2018 THII_2399 31bbd9124a67fc16b02d22ed630ec69f 568 Gene3D G3DSA:2.130.10.30 133 343 1.1E-27 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_2399 31bbd9124a67fc16b02d22ed630ec69f 568 Gene3D G3DSA:2.130.10.30 19 117 2.8E-9 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_2399 31bbd9124a67fc16b02d22ed630ec69f 568 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 41 67 2.4E-5 T 15-10-2018 THII_2399 31bbd9124a67fc16b02d22ed630ec69f 568 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 145 172 9.0E-6 T 15-10-2018 THII_2399 31bbd9124a67fc16b02d22ed630ec69f 568 SUPERFAMILY SSF82171 290 549 2.63E-11 T 15-10-2018 THII_2399 31bbd9124a67fc16b02d22ed630ec69f 568 SUPERFAMILY SSF50985 39 313 8.55E-33 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_3545 ef56408e9f062ff25f4e01102df9b180 815 Gene3D G3DSA:2.60.40.10 148 266 1.5E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3545 ef56408e9f062ff25f4e01102df9b180 815 Gene3D G3DSA:2.60.40.10 488 593 1.5E-14 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3545 ef56408e9f062ff25f4e01102df9b180 815 Gene3D G3DSA:2.60.40.10 269 374 4.4E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3545 ef56408e9f062ff25f4e01102df9b180 815 Gene3D G3DSA:2.60.40.10 29 139 8.0E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3545 ef56408e9f062ff25f4e01102df9b180 815 Gene3D G3DSA:2.60.40.10 377 479 4.6E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3545 ef56408e9f062ff25f4e01102df9b180 815 Pfam PF15780 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin 381 465 5.0E-7 T 15-10-2018 IPR031549 Abnormal spindle-like microcephaly-associated protein, ASH domain THII_3545 ef56408e9f062ff25f4e01102df9b180 815 Pfam PF15780 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin 494 576 5.3E-7 T 15-10-2018 IPR031549 Abnormal spindle-like microcephaly-associated protein, ASH domain THII_3545 ef56408e9f062ff25f4e01102df9b180 815 Pfam PF15780 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin 274 359 2.7E-8 T 15-10-2018 IPR031549 Abnormal spindle-like microcephaly-associated protein, ASH domain THII_1063 3769cd2e6e999a776c1d4d2cd08e84b7 157 Gene3D G3DSA:1.20.1220.20 2 157 1.2E-30 T 15-10-2018 THII_1063 3769cd2e6e999a776c1d4d2cd08e84b7 157 Pfam PF01724 Domain of unknown function DUF29 7 152 2.9E-49 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_3120 298830999ec7ac1661870c9eb56fdae1 196 Pfam PF02397 Bacterial sugar transferase 4 195 2.2E-54 T 15-10-2018 IPR003362 Bacterial sugar transferase THII_1218 83cdaf38c60c63df6e11d8346c9251f2 446 Pfam PF04235 Protein of unknown function (DUF418) 270 420 1.7E-38 T 15-10-2018 IPR007349 Domain of unknown function DUF418 THII_3331 880a1e3a8748eba85654f94fe764c219 309 Pfam PF04381 Putative exonuclease, RdgC 1 300 6.1E-112 T 15-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 THII_3331 880a1e3a8748eba85654f94fe764c219 309 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 302 36.505 T 15-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 THII_2075 acc7ad768858ec7ad76604c27e9ac179 234 SUPERFAMILY SSF54523 7 75 2.41E-5 T 15-10-2018 THII_2075 acc7ad768858ec7ad76604c27e9ac179 234 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2075 acc7ad768858ec7ad76604c27e9ac179 234 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 24 0.001 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2075 acc7ad768858ec7ad76604c27e9ac179 234 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 26 1.0E-4 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2241 26061498ddd504ae28919f5ca74afcc8 130 Pfam PF13612 Transposase DDE domain 1 91 2.5E-16 T 15-10-2018 IPR025668 Transposase DDE domain THII_2836 e8f44ef755092c12d17bb64b2538cde7 449 Pfam PF07690 Major Facilitator Superfamily 15 389 5.2E-17 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 THII_2836 e8f44ef755092c12d17bb64b2538cde7 449 Gene3D G3DSA:1.20.1250.20 4 424 5.2E-27 T 15-10-2018 THII_2836 e8f44ef755092c12d17bb64b2538cde7 449 SUPERFAMILY SSF103473 7 429 3.66E-27 T 15-10-2018 IPR036259 MFS transporter superfamily THII_0083 f2ad9d5441da221877f0d3a0f6acfd3a 115 SUPERFAMILY SSF46689 2 51 4.12E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_0083 f2ad9d5441da221877f0d3a0f6acfd3a 115 Pfam PF01710 Transposase 1 113 6.0E-23 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_2490 2b7d80a2cd0c9f62642f9bb7fb3c8adc 154 PIRSF PIRSF004923 1 153 3.0E-33 T 15-10-2018 IPR026268 Protein RseC THII_2490 2b7d80a2cd0c9f62642f9bb7fb3c8adc 154 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 145 4.2E-29 T 15-10-2018 THII_1981 b328c2c1dfe90c89a5cd599cdd21c2ee 206 Pfam PF01121 Dephospho-CoA kinase 8 184 4.0E-61 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 THII_1981 b328c2c1dfe90c89a5cd599cdd21c2ee 206 SUPERFAMILY SSF52540 7 196 7.63E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1981 b328c2c1dfe90c89a5cd599cdd21c2ee 206 Gene3D G3DSA:3.40.50.300 1 204 1.8E-65 T 15-10-2018 THII_1981 b328c2c1dfe90c89a5cd599cdd21c2ee 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 8 191 2.1E-55 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 THII_1981 b328c2c1dfe90c89a5cd599cdd21c2ee 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 5 200 26.852 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 THII_0684 c8bdb74e5f191456525b410dc9a840e1 214 Pfam PF04773 FecR protein 58 165 2.6E-9 T 15-10-2018 IPR006860 FecR protein THII_0845 840ce0a552700e9f263b96c3e5293224 570 Pfam PF03814 Potassium-transporting ATPase A subunit 11 565 1.3E-245 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 THII_0845 840ce0a552700e9f263b96c3e5293224 570 PIRSF PIRSF001294 1 569 1.7E-241 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 THII_0845 840ce0a552700e9f263b96c3e5293224 570 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 567 35.724 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 THII_0845 840ce0a552700e9f263b96c3e5293224 570 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 565 4.5E-243 T 15-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 THII_1403 1aaa09fa83ae9019c0aeb1f4595b8e95 271 Gene3D G3DSA:3.40.50.1820 16 263 6.5E-66 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1403 1aaa09fa83ae9019c0aeb1f4595b8e95 271 Pfam PF01738 Dienelactone hydrolase family 38 261 1.7E-50 T 15-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 THII_1403 1aaa09fa83ae9019c0aeb1f4595b8e95 271 SUPERFAMILY SSF53474 1 262 2.68E-46 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_3918 e71ba4c79c145c50e0b6ed40cc088ee5 1002 Pfam PF13809 Tubulin like 5 351 9.2E-65 T 15-10-2018 IPR025904 Tubulin-like THII_3918 e71ba4c79c145c50e0b6ed40cc088ee5 1002 Gene3D G3DSA:3.40.50.1440 5 231 1.2E-6 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 THII_3918 e71ba4c79c145c50e0b6ed40cc088ee5 1002 ProSitePatterns PS00227 Tubulin subunits alpha, beta, and gamma signature. 163 169 - T 15-10-2018 IPR017975 Tubulin, conserved site GO:0005525|GO:0005874|GO:0007017 Reactome: R-HSA-380320 THII_3918 e71ba4c79c145c50e0b6ed40cc088ee5 1002 SUPERFAMILY SSF52490 3 193 7.1E-7 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 THII_1423 e08e758ca8bdf4ac5140cf2cde0c5238 312 SUPERFAMILY SSF50985 70 298 6.41E-30 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_1423 e08e758ca8bdf4ac5140cf2cde0c5238 312 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 154 181 9.8E-9 T 15-10-2018 THII_1423 e08e758ca8bdf4ac5140cf2cde0c5238 312 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 230 259 5.6E-5 T 15-10-2018 THII_1423 e08e758ca8bdf4ac5140cf2cde0c5238 312 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 113 134 1.4E-6 T 15-10-2018 THII_1423 e08e758ca8bdf4ac5140cf2cde0c5238 312 Gene3D G3DSA:2.130.10.30 52 308 3.4E-47 T 15-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II THII_1315 854371f653b35f61070e463c65285e50 319 Pfam PF07788 PD-(D/E)XK nuclease superfamily 239 308 4.3E-24 T 15-10-2018 IPR012431 PD-(D/E)XK nuclease THII_1315 854371f653b35f61070e463c65285e50 319 Pfam PF12644 Protein of unknown function (DUF3782) 161 238 1.1E-24 T 15-10-2018 IPR024271 Protein of unknown function DUF3782 THII_2789 1b5e59c58deb9c4455bf97d0f9a100a2 325 SUPERFAMILY SSF55729 21 148 8.12E-14 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_2789 1b5e59c58deb9c4455bf97d0f9a100a2 325 Gene3D G3DSA:3.40.630.30 22 307 2.2E-60 T 15-10-2018 THII_2789 1b5e59c58deb9c4455bf97d0f9a100a2 325 Gene3D G3DSA:3.40.630.30 137 305 2.2E-60 T 15-10-2018 THII_2789 1b5e59c58deb9c4455bf97d0f9a100a2 325 SUPERFAMILY SSF55729 150 312 3.53E-29 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase THII_2789 1b5e59c58deb9c4455bf97d0f9a100a2 325 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 43 309 6.3E-17 T 15-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal THII_3277 13f5afd9522976611c266f1842b5d202 257 SUPERFAMILY SSF52200 107 234 8.5E-22 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_3277 13f5afd9522976611c266f1842b5d202 257 SMART SM00255 109 248 1.3E-4 T 15-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 THII_3277 13f5afd9522976611c266f1842b5d202 257 Pfam PF13676 TIR domain 112 220 1.2E-17 T 15-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 THII_3277 13f5afd9522976611c266f1842b5d202 257 Gene3D G3DSA:3.40.50.10140 81 253 2.3E-22 T 15-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily THII_3526 a5d7177b5d7d480c7e91ae48642a45e1 153 Gene3D G3DSA:1.20.1220.20 2 153 3.4E-29 T 15-10-2018 THII_3526 a5d7177b5d7d480c7e91ae48642a45e1 153 Pfam PF01724 Domain of unknown function DUF29 7 151 1.3E-49 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1213 34670671d520cb8bd7c82452441f2ff9 192 Pfam PF05685 Putative restriction endonuclease 13 170 1.1E-34 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1213 34670671d520cb8bd7c82452441f2ff9 192 Gene3D G3DSA:3.90.1570.10 3 187 1.1E-21 T 15-10-2018 THII_1213 34670671d520cb8bd7c82452441f2ff9 192 SUPERFAMILY SSF52980 4 182 9.12E-25 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0828 00c9dc9632f472ca54f25d0a7b07dcd2 1211 SUPERFAMILY SSF48452 120 243 1.95E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0828 00c9dc9632f472ca54f25d0a7b07dcd2 1211 Pfam PF12770 CHAT domain 923 1207 3.1E-14 T 15-10-2018 IPR024983 CHAT domain THII_0828 00c9dc9632f472ca54f25d0a7b07dcd2 1211 Gene3D G3DSA:1.25.40.10 75 271 6.8E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3740 9059fdbe39dbc5a0fc7982e7091c3a2e 193 Pfam PF01794 Ferric reductase like transmembrane component 27 143 2.5E-17 T 15-10-2018 IPR013130 Ferric reductase transmembrane component-like domain THII_3740 9059fdbe39dbc5a0fc7982e7091c3a2e 193 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 1 186 18.219 T 15-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 THII_0738 29f59c5b165b9871e321d350df4b8690 231 Pfam PF00535 Glycosyl transferase family 2 4 146 2.6E-24 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0738 29f59c5b165b9871e321d350df4b8690 231 Gene3D G3DSA:3.90.550.10 1 231 1.8E-32 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0738 29f59c5b165b9871e321d350df4b8690 231 SUPERFAMILY SSF53448 1 208 4.94E-30 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3628 fb18e69437393c216c3df1f1b350a40c 239 SUPERFAMILY SSF55666 153 236 2.36E-23 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_3628 fb18e69437393c216c3df1f1b350a40c 239 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 15-10-2018 IPR018336 Ribonuclease PH, conserved site THII_3628 fb18e69437393c216c3df1f1b350a40c 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.6E-112 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 THII_3628 fb18e69437393c216c3df1f1b350a40c 239 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 6.2E-10 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_3628 fb18e69437393c216c3df1f1b350a40c 239 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 3.4E-23 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_3628 fb18e69437393c216c3df1f1b350a40c 239 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.291 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 THII_3628 fb18e69437393c216c3df1f1b350a40c 239 SUPERFAMILY SSF54211 1 181 2.94E-43 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold THII_3628 fb18e69437393c216c3df1f1b350a40c 239 Gene3D G3DSA:3.30.230.70 9 238 9.4E-62 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 THII_1210 0a70f8f219bfdb5afce99a110a26ac78 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 43 4.1E-15 T 15-10-2018 IPR003849 Preprotein translocase YajC THII_1210 0a70f8f219bfdb5afce99a110a26ac78 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 43 61 4.1E-15 T 15-10-2018 IPR003849 Preprotein translocase YajC THII_1210 0a70f8f219bfdb5afce99a110a26ac78 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 23 103 2.8E-30 T 15-10-2018 IPR003849 Preprotein translocase YajC THII_1210 0a70f8f219bfdb5afce99a110a26ac78 112 SMART SM01323 21 103 5.7E-41 T 15-10-2018 IPR003849 Preprotein translocase YajC THII_1210 0a70f8f219bfdb5afce99a110a26ac78 112 Pfam PF02699 Preprotein translocase subunit 26 100 1.8E-30 T 15-10-2018 IPR003849 Preprotein translocase YajC THII_2397 9f13c73b9312ab69162a7f25d03d6051 233 PIRSF PIRSF006232 1 231 7.1E-54 T 15-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 THII_2397 9f13c73b9312ab69162a7f25d03d6051 233 Gene3D G3DSA:2.60.120.10 11 134 9.7E-80 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_2397 9f13c73b9312ab69162a7f25d03d6051 233 SUPERFAMILY SSF51182 1 229 2.51E-67 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily THII_2397 9f13c73b9312ab69162a7f25d03d6051 233 Pfam PF02678 Pirin 13 118 9.5E-32 T 15-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 THII_2397 9f13c73b9312ab69162a7f25d03d6051 233 Gene3D G3DSA:2.60.120.10 7 229 9.7E-80 T 15-10-2018 IPR014710 RmlC-like jelly roll fold THII_2151 22f85adfe6aeea4be3b5feb09b510a7e 84 SUPERFAMILY SSF52980 5 82 1.23E-8 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2151 22f85adfe6aeea4be3b5feb09b510a7e 84 Pfam PF05685 Putative restriction endonuclease 5 75 2.1E-15 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2151 22f85adfe6aeea4be3b5feb09b510a7e 84 Gene3D G3DSA:3.90.1570.10 2 83 9.8E-7 T 15-10-2018 THII_1522 86654e64631a50ca136119376f360275 180 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 16 163 1.1E-30 T 15-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1522 86654e64631a50ca136119376f360275 180 SUPERFAMILY SSF56770 5 171 4.06E-39 T 15-10-2018 THII_1522 86654e64631a50ca136119376f360275 180 Gene3D G3DSA:3.40.50.700 4 178 2.8E-39 T 15-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily THII_0757 1d67704e598ecc2672a66741b10acddf 328 SUPERFAMILY SSF52151 8 312 4.71E-54 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_0757 1d67704e598ecc2672a66741b10acddf 328 Pfam PF01734 Patatin-like phospholipase 11 200 1.8E-22 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 THII_0757 1d67704e598ecc2672a66741b10acddf 328 Gene3D G3DSA:3.40.1090.10 1 326 1.3E-95 T 15-10-2018 THII_3502 e4cd5cb2d37584e972ba28a8d3cb59d6 857 Pfam PF04055 Radical SAM superfamily 185 320 8.8E-12 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_3502 e4cd5cb2d37584e972ba28a8d3cb59d6 857 Pfam PF13186 Iron-sulfur cluster-binding domain 480 540 1.8E-10 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain THII_3502 e4cd5cb2d37584e972ba28a8d3cb59d6 857 Gene3D G3DSA:3.20.20.70 383 546 1.3E-13 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3502 e4cd5cb2d37584e972ba28a8d3cb59d6 857 Gene3D G3DSA:3.20.20.70 177 361 8.6E-27 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3502 e4cd5cb2d37584e972ba28a8d3cb59d6 857 SUPERFAMILY SSF102114 177 371 2.35E-32 T 15-10-2018 THII_3618 3497d2302ddf77ec068d444594dade3d 326 SUPERFAMILY SSF51735 133 277 2.15E-18 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3618 3497d2302ddf77ec068d444594dade3d 326 SUPERFAMILY SSF50129 1 166 1.98E-40 T 15-10-2018 IPR011032 GroES-like superfamily THII_3618 3497d2302ddf77ec068d444594dade3d 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 127 1.4E-24 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 THII_3618 3497d2302ddf77ec068d444594dade3d 326 SMART SM00829 6 316 0.0048 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 THII_3618 3497d2302ddf77ec068d444594dade3d 326 Gene3D G3DSA:3.90.180.10 16 302 1.7E-66 T 15-10-2018 THII_3618 3497d2302ddf77ec068d444594dade3d 326 Gene3D G3DSA:3.40.50.720 142 267 1.7E-66 T 15-10-2018 THII_0893 c1d0ffeaf621b77f96d376bbe8365962 81 SUPERFAMILY SSF143011 15 79 8.5E-8 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_0064 088e62dfd20ea10fb58856cef1ef613a 467 Gene3D G3DSA:2.60.120.260 5 198 5.5E-5 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily THII_0064 088e62dfd20ea10fb58856cef1ef613a 467 SUPERFAMILY SSF50969 173 425 3.69E-12 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like THII_0599 4b30b32acb4d3eb5d64536fbb9201753 360 Pfam PF02470 MlaD protein 39 115 6.8E-15 T 15-10-2018 IPR003399 Mce/MlaD THII_0809 a95c4f3c6d4841710996240107160b05 787 Pfam PF02687 FtsX-like permease family 687 770 1.3E-8 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 THII_0809 a95c4f3c6d4841710996240107160b05 787 Pfam PF02687 FtsX-like permease family 294 384 5.6E-8 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 THII_0809 a95c4f3c6d4841710996240107160b05 787 Pfam PF12704 MacB-like periplasmic core domain 19 234 5.0E-10 T 15-10-2018 IPR025857 MacB-like periplasmic core domain THII_2636 5684da35d5a9a707a508c5b937c32137 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.083 T 15-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 THII_2636 5684da35d5a9a707a508c5b937c32137 404 PIRSF PIRSF005572 2 384 2.5E-131 T 15-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 THII_2636 5684da35d5a9a707a508c5b937c32137 404 Gene3D G3DSA:3.40.640.10 16 262 5.7E-162 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_2636 5684da35d5a9a707a508c5b937c32137 404 Gene3D G3DSA:3.90.1150.10 5 374 5.7E-162 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_2636 5684da35d5a9a707a508c5b937c32137 404 Pfam PF00266 Aminotransferase class-V 5 368 1.3E-86 T 15-10-2018 IPR000192 Aminotransferase class V domain THII_2636 5684da35d5a9a707a508c5b937c32137 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 5.6E-226 T 15-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 THII_2636 5684da35d5a9a707a508c5b937c32137 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THII_2636 5684da35d5a9a707a508c5b937c32137 404 SUPERFAMILY SSF53383 5 391 8.91E-111 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_3332 d6b6f57420aa32af8cb65047adbc6dc6 342 Pfam PF04754 Putative transposase, YhgA-like 5 205 4.6E-31 T 15-10-2018 IPR006842 Transposase (putative), YhgA-like THII_1418 4e4f8bce5bac80af55e792bdbef1f535 273 Gene3D G3DSA:2.70.150.20 156 265 2.3E-20 T 15-10-2018 THII_1418 4e4f8bce5bac80af55e792bdbef1f535 273 SUPERFAMILY SSF81653 165 261 8.11E-18 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 THII_1418 4e4f8bce5bac80af55e792bdbef1f535 273 Pfam PF00122 E1-E2 ATPase 164 264 2.1E-17 T 15-10-2018 THII_2989 2b77a1fcd4a31845f29c661010d5df75 124 Gene3D G3DSA:2.60.40.1180 22 123 2.2E-12 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta THII_2989 2b77a1fcd4a31845f29c661010d5df75 124 Pfam PF17137 Domain of unknown function (DUF5110) 72 108 2.0E-10 T 15-10-2018 IPR033403 Domain of unknown function DUF5110 THII_3568 8334de3f097d27342e96009dd329b110 100 Gene3D G3DSA:3.30.750.24 8 100 1.5E-12 T 15-10-2018 IPR036513 STAS domain superfamily THII_3568 8334de3f097d27342e96009dd329b110 100 SUPERFAMILY SSF52091 10 93 5.1E-13 T 15-10-2018 IPR036513 STAS domain superfamily THII_3568 8334de3f097d27342e96009dd329b110 100 Pfam PF13466 STAS domain 13 88 4.7E-15 T 15-10-2018 IPR002645 STAS domain THII_0119 41d1d1546c24f64b8f6b4c0ceb71dc71 239 Gene3D G3DSA:3.40.50.150 35 237 2.2E-49 T 15-10-2018 THII_0119 41d1d1546c24f64b8f6b4c0ceb71dc71 239 SUPERFAMILY SSF53335 5 219 3.91E-39 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0119 41d1d1546c24f64b8f6b4c0ceb71dc71 239 Pfam PF13847 Methyltransferase domain 66 207 1.8E-26 T 15-10-2018 IPR025714 Methyltransferase domain THII_1300 4c990ed92ff9b657bb738ff7674917b4 683 SUPERFAMILY SSF50249 235 616 1.09E-86 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_1300 4c990ed92ff9b657bb738ff7674917b4 683 Pfam PF00773 RNB domain 294 572 8.4E-67 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 THII_1300 4c990ed92ff9b657bb738ff7674917b4 683 SMART SM00955 284 574 1.5E-75 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 THII_0079 e329ff1f792c2382e63abde36f7608ff 185 Gene3D G3DSA:3.30.420.470 4 167 1.4E-8 T 15-10-2018 THII_0079 e329ff1f792c2382e63abde36f7608ff 185 Pfam PF13358 DDE superfamily endonuclease 7 142 1.1E-15 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_0106 c5dc462de70920d53c3bf587c8935b84 344 SUPERFAMILY SSF53756 12 339 4.55E-91 T 15-10-2018 THII_0106 c5dc462de70920d53c3bf587c8935b84 344 Gene3D G3DSA:3.40.50.2000 11 153 4.0E-46 T 15-10-2018 THII_0106 c5dc462de70920d53c3bf587c8935b84 344 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 12 340 1.2E-130 T 15-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 THII_0106 c5dc462de70920d53c3bf587c8935b84 344 Gene3D G3DSA:3.40.50.2000 169 342 1.2E-57 T 15-10-2018 THII_0106 c5dc462de70920d53c3bf587c8935b84 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 80 323 1.3E-62 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 THII_2171 c599b605cebf5dce7e343bdfb40dbb7e 624 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 132 585 98.22 T 15-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 THII_2171 c599b605cebf5dce7e343bdfb40dbb7e 624 Pfam PF13667 ThiC-associated domain 22 93 3.1E-29 T 15-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 THII_2171 c599b605cebf5dce7e343bdfb40dbb7e 624 Gene3D G3DSA:3.20.20.540 204 516 2.2E-153 T 15-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 THII_2171 c599b605cebf5dce7e343bdfb40dbb7e 624 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 132 584 3.4E-214 T 15-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 THII_2171 c599b605cebf5dce7e343bdfb40dbb7e 624 Pfam PF01964 Radical SAM ThiC family 133 580 1.8E-199 T 15-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 THII_1478 bfab6a5c5318228352485b072df8b4b6 242 Gene3D G3DSA:1.20.5.1070 137 205 2.5E-6 T 15-10-2018 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 57 81 3.9E-12 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 429 451 3.9E-12 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 272 294 3.9E-12 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 83 103 3.9E-12 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 Pfam PF00361 Proton-conducting membrane transporter 132 415 2.6E-87 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 120 9.9E-27 T 15-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 646 6.9E-244 T 15-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 322 334 1.6E-65 T 15-10-2018 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 1.6E-65 T 15-10-2018 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 109 129 1.6E-65 T 15-10-2018 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 254 280 1.6E-65 T 15-10-2018 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 430 449 1.6E-65 T 15-10-2018 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 232 253 1.6E-65 T 15-10-2018 THII_2947 a3bcf33cb3d693ebbc76b78d8577d37c 648 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 156 177 1.6E-65 T 15-10-2018 THII_3602 11d7a05333c0525a9bbd7966fb00e4bd 94 Pfam PF05488 PAAR motif 27 94 1.2E-10 T 15-10-2018 IPR008727 PAAR motif THII_3602 11d7a05333c0525a9bbd7966fb00e4bd 94 Gene3D G3DSA:2.60.200.60 15 94 1.6E-15 T 15-10-2018 THII_1288 7b09421c59e957da8536cc5f86b88c26 134 SMART SM00448 10 123 2.0E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_1288 7b09421c59e957da8536cc5f86b88c26 134 Gene3D G3DSA:3.40.50.12740 10 133 8.9E-37 T 15-10-2018 THII_1288 7b09421c59e957da8536cc5f86b88c26 134 SUPERFAMILY SSF52172 8 127 7.97E-35 T 15-10-2018 IPR011006 CheY-like superfamily THII_1288 7b09421c59e957da8536cc5f86b88c26 134 Pfam PF00072 Response regulator receiver domain 12 123 4.9E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 THII_2694 58d4cd543e086679b6bb13f338106a48 335 Gene3D G3DSA:3.30.1330.10 8 154 5.8E-40 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily THII_2694 58d4cd543e086679b6bb13f338106a48 335 SUPERFAMILY SSF56042 161 329 3.44E-33 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily THII_2694 58d4cd543e086679b6bb13f338106a48 335 Pfam PF02769 AIR synthase related protein, C-terminal domain 164 308 4.2E-17 T 15-10-2018 IPR010918 PurM-like, C-terminal domain THII_2694 58d4cd543e086679b6bb13f338106a48 335 Gene3D G3DSA:3.90.650.10 159 335 1.7E-45 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily THII_2694 58d4cd543e086679b6bb13f338106a48 335 Pfam PF00586 AIR synthase related protein, N-terminal domain 51 149 1.9E-13 T 15-10-2018 IPR016188 PurM-like, N-terminal domain THII_2694 58d4cd543e086679b6bb13f338106a48 335 SUPERFAMILY SSF55326 7 153 2.44E-27 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily THII_2694 58d4cd543e086679b6bb13f338106a48 335 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 7 335 5.4E-109 T 15-10-2018 IPR011854 Carbamoyl dehydratase HypE THII_2694 58d4cd543e086679b6bb13f338106a48 335 PIRSF PIRSF005644 2 335 3.3E-100 T 15-10-2018 IPR011854 Carbamoyl dehydratase HypE THII_3327 e9d7a4ea59c4f52221bb0b04b21235a8 1091 Pfam PF03993 Domain of Unknown Function (DUF349) 806 873 1.1E-10 T 15-10-2018 IPR007139 Protein of unknown function DUF349 THII_3327 e9d7a4ea59c4f52221bb0b04b21235a8 1091 Pfam PF03993 Domain of Unknown Function (DUF349) 627 706 3.4E-17 T 15-10-2018 IPR007139 Protein of unknown function DUF349 THII_2464 921122e0d6318bc0f9131b4529288dd5 375 Pfam PF02405 Permease MlaE 160 368 2.3E-72 T 15-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 THII_2464 921122e0d6318bc0f9131b4529288dd5 375 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 136 370 2.6E-74 T 15-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria THII_2464 921122e0d6318bc0f9131b4529288dd5 375 SUPERFAMILY SSF52091 10 95 3.14E-9 T 15-10-2018 IPR036513 STAS domain superfamily THII_2464 921122e0d6318bc0f9131b4529288dd5 375 Pfam PF13466 STAS domain 20 94 2.0E-7 T 15-10-2018 IPR002645 STAS domain THII_2953 d0c750342a9f97bc46f4513fd05bc49a 335 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 2 329 26.011 T 15-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2953 d0c750342a9f97bc46f4513fd05bc49a 335 Pfam PF00146 NADH dehydrogenase 10 322 1.4E-130 T 15-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2953 d0c750342a9f97bc46f4513fd05bc49a 335 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 206 219 - T 15-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2560 38a7bf99e42cbed1fe442d60f016a26e 122 SMART SM00530 1 52 8.9E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2560 38a7bf99e42cbed1fe442d60f016a26e 122 SUPERFAMILY SSF47413 2 56 3.75E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_2560 38a7bf99e42cbed1fe442d60f016a26e 122 Gene3D G3DSA:1.10.260.40 1 109 1.0E-14 T 15-10-2018 THII_2560 38a7bf99e42cbed1fe442d60f016a26e 122 Pfam PF01381 Helix-turn-helix 5 52 3.4E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2461 d6d15a2da23702e96b06210393cf88eb 424 Pfam PF02754 Cysteine-rich domain 306 393 1.9E-14 T 15-10-2018 IPR004017 Cysteine-rich domain THII_2461 d6d15a2da23702e96b06210393cf88eb 424 Pfam PF13183 4Fe-4S dicluster domain 25 112 8.8E-10 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THII_2461 d6d15a2da23702e96b06210393cf88eb 424 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 98 109 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THII_2461 d6d15a2da23702e96b06210393cf88eb 424 SUPERFAMILY SSF46548 7 127 3.49E-15 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 THII_0731 ea4607585923b3dea7ac5ea323f5be48 426 Pfam PF09594 Glycosyltransferase family 87 88 296 4.1E-13 T 15-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 THII_0737 97c8012359177618d060fc64a128c597 306 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 276 8.8E-51 T 15-10-2018 IPR016040 NAD(P)-binding domain THII_0737 97c8012359177618d060fc64a128c597 306 SUPERFAMILY SSF51735 1 284 1.56E-79 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0737 97c8012359177618d060fc64a128c597 306 Gene3D G3DSA:3.90.25.10 144 280 7.8E-86 T 15-10-2018 THII_0737 97c8012359177618d060fc64a128c597 306 PRINTS PR01713 Nucleotide sugar epimerase signature 207 222 1.1E-9 T 15-10-2018 THII_0737 97c8012359177618d060fc64a128c597 306 PRINTS PR01713 Nucleotide sugar epimerase signature 247 264 1.1E-9 T 15-10-2018 THII_0737 97c8012359177618d060fc64a128c597 306 PRINTS PR01713 Nucleotide sugar epimerase signature 184 199 1.1E-9 T 15-10-2018 THII_0737 97c8012359177618d060fc64a128c597 306 Gene3D G3DSA:3.40.50.720 1 268 7.8E-86 T 15-10-2018 THII_2312 37dad550e5163b1e70053d4057d71510 152 Pfam PF00578 AhpC/TSA family 3 131 9.0E-32 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 THII_2312 37dad550e5163b1e70053d4057d71510 152 Gene3D G3DSA:3.40.30.10 1 151 8.5E-42 T 15-10-2018 THII_2312 37dad550e5163b1e70053d4057d71510 152 SUPERFAMILY SSF52833 2 152 1.57E-43 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_2312 37dad550e5163b1e70053d4057d71510 152 PIRSF PIRSF000239 1 152 3.4E-23 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 THII_3653 fefab999e377a227ebd74f1d31c3188f 297 TIGRFAM TIGR04222 near_uncomplex: TIGR04222 domain 42 241 8.6E-20 T 15-10-2018 IPR026467 Ser/Gly rich, Cys interspersed, C-terminal domain THII_3653 fefab999e377a227ebd74f1d31c3188f 297 Pfam PF09972 Predicted membrane protein (DUF2207) 36 218 5.0E-9 T 15-10-2018 IPR018702 Protein of unknown function DUF2207, membrane THII_2927 75ffb73385968e746aa3c6b955a08705 906 SUPERFAMILY SSF48695 462 902 2.46E-19 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily THII_0229 c4892188585d7c667614163f88338dca 89 Gene3D G3DSA:3.30.2310.20 1 89 2.0E-11 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_0229 c4892188585d7c667614163f88338dca 89 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 88 3.8E-9 T 15-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin THII_0229 c4892188585d7c667614163f88338dca 89 SUPERFAMILY SSF143011 1 89 3.27E-18 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_2271 d147885915ca10bcb4c674d9fb959e8d 127 Pfam PF01850 PIN domain 4 117 1.4E-10 T 15-10-2018 IPR002716 PIN domain THII_2271 d147885915ca10bcb4c674d9fb959e8d 127 Gene3D G3DSA:3.40.50.1010 3 123 1.6E-18 T 15-10-2018 THII_2271 d147885915ca10bcb4c674d9fb959e8d 127 SUPERFAMILY SSF88723 1 121 3.64E-17 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_3353 354dbf22f0e1706d676e5b975934a603 155 Gene3D G3DSA:1.20.1220.20 3 154 8.6E-27 T 15-10-2018 THII_3353 354dbf22f0e1706d676e5b975934a603 155 Pfam PF01724 Domain of unknown function DUF29 8 152 2.2E-48 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2923 513b4e968fa757f39ff0b28f29518f56 425 Pfam PF01935 Domain of unknown function DUF87 5 198 1.9E-15 T 15-10-2018 IPR002789 Helicase HerA, central domain THII_2923 513b4e968fa757f39ff0b28f29518f56 425 SUPERFAMILY SSF52540 3 367 2.39E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2923 513b4e968fa757f39ff0b28f29518f56 425 Pfam PF05872 Bacterial protein of unknown function (DUF853) 264 391 1.1E-5 T 15-10-2018 IPR033186 Helicase HerA-like C-terminal THII_2923 513b4e968fa757f39ff0b28f29518f56 425 Gene3D G3DSA:3.40.50.300 2 98 8.7E-14 T 15-10-2018 THII_2923 513b4e968fa757f39ff0b28f29518f56 425 Gene3D G3DSA:3.40.50.300 227 406 7.3E-17 T 15-10-2018 THII_3143 ada08e5e87eb2db8a9aac3d56086b04a 270 Pfam PF06051 Domain of Unknown Function (DUF928) 101 265 2.3E-27 T 15-10-2018 IPR010328 Protein of unknown function DUF928 THII_1431 25d8c065d26759ed30cf8680e98c6670 389 Gene3D G3DSA:1.20.1530.20 3 376 4.1E-58 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily THII_1431 25d8c065d26759ed30cf8680e98c6670 389 Pfam PF00999 Sodium/hydrogen exchanger family 11 368 8.8E-44 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 THII_0741 5533211b1b00d68774999c2c366a4cdf 360 PIRSF PIRSF000390 1 360 1.2E-115 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_0741 5533211b1b00d68774999c2c366a4cdf 360 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 358 1.3E-129 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_0741 5533211b1b00d68774999c2c366a4cdf 360 SUPERFAMILY SSF53383 9 360 4.95E-120 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_0741 5533211b1b00d68774999c2c366a4cdf 360 Gene3D G3DSA:3.40.640.10 1 243 3.6E-101 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_0741 5533211b1b00d68774999c2c366a4cdf 360 Gene3D G3DSA:3.90.1150.10 245 360 7.3E-38 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_1033 3b152bb5b3dea0ee310d355ccca7c4de 1406 Gene3D G3DSA:1.20.58.2200 1344 1406 7.9E-16 T 15-10-2018 IPR038440 FimV, C-terminal domain superfamily THII_1033 3b152bb5b3dea0ee310d355ccca7c4de 1406 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 192 241 7.2E-13 T 15-10-2018 IPR020012 Motility protein FimV, N-terminal THII_1033 3b152bb5b3dea0ee310d355ccca7c4de 1406 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1363 1405 8.7E-15 T 15-10-2018 IPR020011 Motility protein FimV, C-terminal THII_1033 3b152bb5b3dea0ee310d355ccca7c4de 1406 Gene3D G3DSA:1.25.40.10 642 703 1.4E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3114 432b9d04183e7023b06a1a626e33fab9 400 Pfam PF12704 MacB-like periplasmic core domain 20 239 1.7E-39 T 15-10-2018 IPR025857 MacB-like periplasmic core domain THII_3114 432b9d04183e7023b06a1a626e33fab9 400 Pfam PF02687 FtsX-like permease family 306 393 4.0E-10 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 THII_2552 4b464336d7b859506f425a917cf3f5c8 267 Pfam PF02673 Bacitracin resistance protein BacA 7 260 2.1E-74 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 THII_2552 4b464336d7b859506f425a917cf3f5c8 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 266 16.528 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 THII_2552 4b464336d7b859506f425a917cf3f5c8 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 258 8.3E-69 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 THII_2678 b1756fad445c01233e49be58bfaebd1e 378 SUPERFAMILY SSF102114 40 324 8.24E-49 T 15-10-2018 THII_2678 b1756fad445c01233e49be58bfaebd1e 378 Pfam PF16199 Radical_SAM C-terminal domain 238 319 3.8E-24 T 15-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 THII_2678 b1756fad445c01233e49be58bfaebd1e 378 Pfam PF04055 Radical SAM superfamily 70 230 5.2E-14 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_2678 b1756fad445c01233e49be58bfaebd1e 378 Gene3D G3DSA:3.80.30.20 67 267 2.2E-16 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe THII_2678 b1756fad445c01233e49be58bfaebd1e 378 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 34 330 2.2E-116 T 15-10-2018 IPR005911 Protein YhcC-like GO:0051536 THII_2678 b1756fad445c01233e49be58bfaebd1e 378 SMART SM00729 50 277 2.1E-42 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_0137 b5727d73656865607631b442471b902f 433 SUPERFAMILY SSF75011 63 272 1.44E-7 T 15-10-2018 THII_2237 de842c20eef09c8b54d7cb486b6935ab 180 SUPERFAMILY SSF53098 49 131 4.17E-6 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_3390 582960118f7c12990f77a8bc2b6fa954 601 SMART SM00287 378 441 3.8E-4 T 15-10-2018 IPR003646 SH3-like domain, bacterial-type THII_3390 582960118f7c12990f77a8bc2b6fa954 601 Gene3D G3DSA:2.30.30.40 373 438 2.4E-8 T 15-10-2018 THII_0186 19cc2a518a45069851382029dc8e470c 192 Gene3D G3DSA:3.90.1570.10 9 183 9.0E-20 T 15-10-2018 THII_0186 19cc2a518a45069851382029dc8e470c 192 SUPERFAMILY SSF52980 20 179 1.34E-23 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0186 19cc2a518a45069851382029dc8e470c 192 Pfam PF05685 Putative restriction endonuclease 14 169 6.3E-29 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1704 8f9b4a8e134d5e4f6afc74528d9072e3 266 SUPERFAMILY SSF52540 20 265 7.97E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1704 8f9b4a8e134d5e4f6afc74528d9072e3 266 Pfam PF00685 Sulfotransferase domain 25 262 1.2E-38 T 15-10-2018 IPR000863 Sulfotransferase domain GO:0008146 THII_1704 8f9b4a8e134d5e4f6afc74528d9072e3 266 Gene3D G3DSA:3.40.50.300 12 263 1.0E-57 T 15-10-2018 THII_0082 a946fedc39483d05dabc78dd355ef67b 134 Pfam PF13358 DDE superfamily endonuclease 2 125 2.2E-23 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_0082 a946fedc39483d05dabc78dd355ef67b 134 Gene3D G3DSA:3.30.420.470 5 133 2.4E-10 T 15-10-2018 THII_3727 74a18bb44fe08ca27c69c11fcae3861e 290 SUPERFAMILY SSF52540 45 193 4.99E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3727 74a18bb44fe08ca27c69c11fcae3861e 290 Pfam PF05673 Protein of unknown function (DUF815) 33 284 2.5E-107 T 15-10-2018 IPR008533 Domain of unknown function DUF815 THII_3727 74a18bb44fe08ca27c69c11fcae3861e 290 Gene3D G3DSA:3.40.50.300 47 218 2.6E-11 T 15-10-2018 THII_3488 7528ef63018b0e17238de5718da2b3fa 596 SUPERFAMILY SSF88713 158 573 5.86E-55 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 THII_3488 7528ef63018b0e17238de5718da2b3fa 596 Gene3D G3DSA:3.20.110.20 155 574 4.4E-15 T 15-10-2018 THII_2445 8366438ad874d58324838825fd3eaba8 140 Pfam PF13466 STAS domain 52 126 9.8E-9 T 15-10-2018 IPR002645 STAS domain THII_2445 8366438ad874d58324838825fd3eaba8 140 SUPERFAMILY SSF52091 51 130 9.42E-6 T 15-10-2018 IPR036513 STAS domain superfamily THII_1750 6509d4683121a408ace20d9d4f42e900 81 Gene3D G3DSA:3.10.20.30 3 77 4.6E-20 T 15-10-2018 IPR012675 Beta-grasp domain superfamily THII_1750 6509d4683121a408ace20d9d4f42e900 81 SUPERFAMILY SSF54285 3 77 4.11E-17 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THII_1750 6509d4683121a408ace20d9d4f42e900 81 Pfam PF02597 ThiS family 5 77 8.0E-17 T 15-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 THII_2046 e49444ef25ee60f7109a65cc897f5a70 392 Gene3D G3DSA:1.10.443.10 212 387 7.7E-26 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 THII_2046 e49444ef25ee60f7109a65cc897f5a70 392 Pfam PF00589 Phage integrase family 237 365 2.2E-15 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 THII_2046 e49444ef25ee60f7109a65cc897f5a70 392 Pfam PF13356 Arm DNA-binding domain 24 87 2.1E-8 T 15-10-2018 IPR025166 Integrase, DNA-binding domain THII_2046 e49444ef25ee60f7109a65cc897f5a70 392 Gene3D G3DSA:3.30.160.390 1 105 5.2E-5 T 15-10-2018 IPR038488 Integrase, DNA-binding domain superfamily THII_2046 e49444ef25ee60f7109a65cc897f5a70 392 SUPERFAMILY SSF56349 93 381 3.24E-40 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 THII_2542 b41d84e0860f34f6ab239e81c9c4b3ea 152 Gene3D G3DSA:3.40.50.1010 1 140 1.1E-8 T 15-10-2018 THII_2542 b41d84e0860f34f6ab239e81c9c4b3ea 152 Pfam PF01850 PIN domain 4 133 3.6E-8 T 15-10-2018 IPR002716 PIN domain THII_2542 b41d84e0860f34f6ab239e81c9c4b3ea 152 SUPERFAMILY SSF88723 1 137 4.49E-10 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_3454 5ac15c8099d588ec35d5347112206c49 235 SUPERFAMILY SSF52980 18 141 1.18E-13 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3454 5ac15c8099d588ec35d5347112206c49 235 Pfam PF05685 Putative restriction endonuclease 15 172 3.7E-23 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3454 5ac15c8099d588ec35d5347112206c49 235 Gene3D G3DSA:3.90.1570.10 20 141 2.6E-7 T 15-10-2018 THII_0597 d1546ec0ebe22dd885af6b786484e026 464 Pfam PF13440 Polysaccharide biosynthesis protein 63 355 2.4E-50 T 15-10-2018 THII_3285 7354ccf476eed916ae2c98aa62e61975 338 Pfam PF00793 DAHP synthetase I family 89 325 6.6E-66 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 THII_3285 7354ccf476eed916ae2c98aa62e61975 338 Gene3D G3DSA:3.20.20.70 76 332 1.8E-95 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3285 7354ccf476eed916ae2c98aa62e61975 338 Gene3D G3DSA:3.30.70.1140 1 75 5.8E-29 T 15-10-2018 THII_3285 7354ccf476eed916ae2c98aa62e61975 338 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 72 328 2.3E-109 T 15-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 THII_3285 7354ccf476eed916ae2c98aa62e61975 338 SUPERFAMILY SSF51569 1 336 6.14E-111 T 15-10-2018 THII_2695 1ddf4edc1d2d115c41e6b047d7b462b9 207 Pfam PF01925 Sulfite exporter TauE/SafE 6 199 6.7E-14 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 THII_1801 7dedbeb743e6742351df9dd4f5aa29a8 247 PIRSF PIRSF004976 3 247 2.1E-53 T 15-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 THII_1801 7dedbeb743e6742351df9dd4f5aa29a8 247 Pfam PF01171 PP-loop family 31 199 4.4E-17 T 15-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 THII_1801 7dedbeb743e6742351df9dd4f5aa29a8 247 SUPERFAMILY SSF52402 9 217 9.26E-45 T 15-10-2018 THII_1801 7dedbeb743e6742351df9dd4f5aa29a8 247 Gene3D G3DSA:3.40.50.620 5 246 1.6E-43 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THII_0363 b449812d823ec16d703265b2be90f4fd 736 SMART SM00327 550 735 2.9E-13 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_0363 b449812d823ec16d703265b2be90f4fd 736 SUPERFAMILY SSF53300 551 734 2.23E-20 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_0363 b449812d823ec16d703265b2be90f4fd 736 Gene3D G3DSA:3.40.50.410 547 722 2.0E-13 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_0851 b0f71d8f862df2f07b6284ff092a2ff2 252 SUPERFAMILY SSF46626 16 216 1.92E-43 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0851 b0f71d8f862df2f07b6284ff092a2ff2 252 Pfam PF02167 Cytochrome C1 family 33 251 8.7E-19 T 15-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 THII_0851 b0f71d8f862df2f07b6284ff092a2ff2 252 Gene3D G3DSA:1.10.760.10 28 217 9.8E-14 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0776 62927687c296a8d5a7e2f96783ca7703 279 SUPERFAMILY SSF109604 46 195 4.94E-6 T 15-10-2018 THII_0332 c4cebc4d6297125ca182741750f56431 316 SUPERFAMILY SSF103190 34 141 4.19E-18 T 15-10-2018 IPR029151 Periplasmic sensor-like domain superfamily THII_0332 c4cebc4d6297125ca182741750f56431 316 Gene3D G3DSA:3.30.450.20 34 136 6.2E-13 T 15-10-2018 THII_3176 38afe32c30d0bc3adb00186efeabda5e 161 SUPERFAMILY SSF51161 14 156 7.07E-38 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily THII_3176 38afe32c30d0bc3adb00186efeabda5e 161 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 25 58 6.8E-8 T 15-10-2018 IPR001451 Hexapeptide repeat THII_3176 38afe32c30d0bc3adb00186efeabda5e 161 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 108 136 3.9E-8 T 15-10-2018 IPR001451 Hexapeptide repeat THII_3176 38afe32c30d0bc3adb00186efeabda5e 161 Gene3D G3DSA:2.160.10.10 1 152 2.4E-40 T 15-10-2018 THII_3176 38afe32c30d0bc3adb00186efeabda5e 161 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 110 138 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 THII_1221 79f4453f42359a1001214a97b40161c9 101 Gene3D G3DSA:3.40.50.10580 1 93 3.2E-9 T 15-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_1221 79f4453f42359a1001214a97b40161c9 101 Pfam PF01990 ATP synthase (F/14-kDa) subunit 2 78 1.0E-6 T 15-10-2018 IPR008218 ATPase, V1 complex, subunit F GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_1221 79f4453f42359a1001214a97b40161c9 101 SUPERFAMILY SSF159468 1 96 1.83E-12 T 15-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 THII_2658 db64ecd3ba7d26717fd498c66cd6716a 157 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 46 108 2.2E-22 T 15-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain THII_2658 db64ecd3ba7d26717fd498c66cd6716a 157 Pfam PF12836 Helix-hairpin-helix motif 45 107 9.8E-22 T 15-10-2018 THII_2658 db64ecd3ba7d26717fd498c66cd6716a 157 SUPERFAMILY SSF47781 30 113 2.56E-26 T 15-10-2018 IPR010994 RuvA domain 2-like THII_2658 db64ecd3ba7d26717fd498c66cd6716a 157 Gene3D G3DSA:1.10.150.280 35 112 8.3E-23 T 15-10-2018 THII_3382 82e511f8de4856650e44e01743c547b6 64 Pfam PF12784 PD-(D/E)XK nuclease family transposase 29 63 4.7E-10 T 15-10-2018 THII_2272 1481fe0d3802b8497862271d2746df67 716 Pfam PF14072 DNA-sulfur modification-associated 31 290 2.0E-11 T 15-10-2018 IPR017642 DNA sulphur modification protein DndB THII_2465 095b7ffff75a83bf8853354eb7490269 235 SUPERFAMILY SSF54106 143 185 2.09E-9 T 15-10-2018 THII_2465 095b7ffff75a83bf8853354eb7490269 235 Gene3D G3DSA:3.10.350.10 143 186 1.4E-13 T 15-10-2018 IPR036779 LysM domain superfamily THII_2465 095b7ffff75a83bf8853354eb7490269 235 Pfam PF01476 LysM domain 145 185 1.2E-12 T 15-10-2018 IPR018392 LysM domain THII_2465 095b7ffff75a83bf8853354eb7490269 235 SMART SM00257 144 187 1.3E-11 T 15-10-2018 IPR018392 LysM domain THII_1011 39a8569f69d2960ea2ac77d70442d2fd 494 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 490 2.3E-219 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath THII_1011 39a8569f69d2960ea2ac77d70442d2fd 494 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 69 490 1.5E-196 T 15-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath THII_0399 fa8eb4432d5a48a8c6c8b5c10664963c 84 SUPERFAMILY SSF143011 1 81 1.44E-23 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_0399 fa8eb4432d5a48a8c6c8b5c10664963c 84 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 2.1E-12 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family THII_0399 fa8eb4432d5a48a8c6c8b5c10664963c 84 Gene3D G3DSA:3.30.2310.20 1 84 2.5E-23 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_0093 d7158fda5092788f39ef74619d4b57dc 374 Pfam PF06804 NlpB/DapX lipoprotein 32 370 1.2E-50 T 15-10-2018 IPR010653 NlpB/DapX lipoprotein THII_0093 d7158fda5092788f39ef74619d4b57dc 374 Gene3D G3DSA:3.30.310.170 259 374 1.4E-16 T 15-10-2018 THII_0335 681916e3c6765fb9ae9dc3100e3f7dc3 466 SUPERFAMILY SSF81442 3 456 1.26E-89 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0335 681916e3c6765fb9ae9dc3100e3f7dc3 466 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 196 252 - T 15-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0335 681916e3c6765fb9ae9dc3100e3f7dc3 466 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 8 436 1.7E-82 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_0335 681916e3c6765fb9ae9dc3100e3f7dc3 466 Gene3D G3DSA:1.20.210.10 1 459 1.3E-128 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 THII_2492 7dd68f708996616ef27fe61aebedea56 83 Pfam PF05768 Glutaredoxin-like domain (DUF836) 7 80 4.0E-17 T 15-10-2018 IPR008554 Glutaredoxin-like THII_2492 7dd68f708996616ef27fe61aebedea56 83 SUPERFAMILY SSF52833 3 81 3.06E-17 T 15-10-2018 IPR036249 Thioredoxin-like superfamily THII_2492 7dd68f708996616ef27fe61aebedea56 83 Gene3D G3DSA:3.40.30.10 2 80 3.1E-23 T 15-10-2018 THII_1851 9e76cbfd4fefd788c749eea9d5c86e2f 167 Pfam PF04390 Lipopolysaccharide-assembly 47 158 1.4E-5 T 15-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 THII_1851 9e76cbfd4fefd788c749eea9d5c86e2f 167 Gene3D G3DSA:3.30.160.150 18 167 2.3E-38 T 15-10-2018 THII_1851 9e76cbfd4fefd788c749eea9d5c86e2f 167 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 2 163 19.379 T 15-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 THII_0529 f22a45b0dfb40439588bfed74d353cd7 183 Gene3D G3DSA:3.40.50.300 1 153 7.1E-9 T 15-10-2018 THII_0529 f22a45b0dfb40439588bfed74d353cd7 183 SUPERFAMILY SSF52540 2 149 2.92E-8 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3040 ed8083a3e137104381576cedca959b6e 391 Gene3D G3DSA:3.30.1380.20 19 145 1.6E-5 T 15-10-2018 THII_3040 ed8083a3e137104381576cedca959b6e 391 SUPERFAMILY SSF111126 64 141 1.73E-5 T 15-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily THII_0275 27a9269a0a08e672f53a275d2d302cc7 251 Pfam PF12644 Protein of unknown function (DUF3782) 93 170 2.5E-23 T 15-10-2018 IPR024271 Protein of unknown function DUF3782 THII_0275 27a9269a0a08e672f53a275d2d302cc7 251 Pfam PF07788 PD-(D/E)XK nuclease superfamily 171 240 2.4E-23 T 15-10-2018 IPR012431 PD-(D/E)XK nuclease THII_1855 d02f77bb16aeedd732b4f4989024ca2c 357 SUPERFAMILY SSF52540 23 302 4.87E-8 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1911 e7a96b35670f4559530708959992686e 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 8 139 3.5E-31 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 THII_1911 e7a96b35670f4559530708959992686e 139 Gene3D G3DSA:2.60.120.460 1 139 1.8E-50 T 15-10-2018 IPR035917 YjbQ-like superfamily THII_1911 e7a96b35670f4559530708959992686e 139 SUPERFAMILY SSF111038 1 139 7.33E-46 T 15-10-2018 IPR035917 YjbQ-like superfamily THII_1911 e7a96b35670f4559530708959992686e 139 Pfam PF01894 Uncharacterised protein family UPF0047 20 135 7.1E-35 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 THII_1911 e7a96b35670f4559530708959992686e 139 PIRSF PIRSF004681 1 139 8.7E-41 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 THII_0536 b4f6f1a302a3e2eadd28f31b2e8e9c6f 158 Pfam PF05685 Putative restriction endonuclease 4 138 9.4E-18 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0536 b4f6f1a302a3e2eadd28f31b2e8e9c6f 158 SUPERFAMILY SSF52980 1 154 6.97E-20 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0536 b4f6f1a302a3e2eadd28f31b2e8e9c6f 158 Gene3D G3DSA:3.90.1570.10 1 156 2.1E-24 T 15-10-2018 THII_1959 33ce0003ef9d2b3d16d606a164e52a04 203 Gene3D G3DSA:3.40.50.150 5 167 1.0E-26 T 15-10-2018 THII_1959 33ce0003ef9d2b3d16d606a164e52a04 203 SUPERFAMILY SSF53335 7 162 4.06E-27 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1959 33ce0003ef9d2b3d16d606a164e52a04 203 Pfam PF08241 Methyltransferase domain 48 139 6.3E-19 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 THII_3267 7d9175e4e117fac41402422a42b9aa96 172 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 4.1E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3267 7d9175e4e117fac41402422a42b9aa96 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3267 7d9175e4e117fac41402422a42b9aa96 172 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 10 153 8.8E-28 T 15-10-2018 IPR013362 Pilus modification type IV, PilV THII_3267 7d9175e4e117fac41402422a42b9aa96 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 31 5.7E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3267 7d9175e4e117fac41402422a42b9aa96 172 SUPERFAMILY SSF54523 12 151 6.51E-5 T 15-10-2018 THII_2997 193f3b99c31a22907f6ad881fe8e474e 233 Gene3D G3DSA:3.90.1570.10 11 136 2.0E-7 T 15-10-2018 THII_2997 193f3b99c31a22907f6ad881fe8e474e 233 SUPERFAMILY SSF52980 17 160 9.12E-13 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2997 193f3b99c31a22907f6ad881fe8e474e 233 Pfam PF05685 Putative restriction endonuclease 16 167 2.3E-21 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1018 6d5a61a388f642df381e4287f978af7d 735 Gene3D G3DSA:1.25.40.10 622 722 2.9E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1018 6d5a61a388f642df381e4287f978af7d 735 SUPERFAMILY SSF48452 538 697 1.14E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1018 6d5a61a388f642df381e4287f978af7d 735 SMART SM00028 568 601 9.3 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1018 6d5a61a388f642df381e4287f978af7d 735 SMART SM00028 539 567 190.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1018 6d5a61a388f642df381e4287f978af7d 735 SMART SM00028 668 701 0.011 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1018 6d5a61a388f642df381e4287f978af7d 735 SMART SM00028 634 667 0.4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1018 6d5a61a388f642df381e4287f978af7d 735 Pfam PF14559 Tetratricopeptide repeat 547 604 1.6E-5 T 15-10-2018 THII_1018 6d5a61a388f642df381e4287f978af7d 735 Gene3D G3DSA:1.25.40.10 522 621 3.9E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1018 6d5a61a388f642df381e4287f978af7d 735 Pfam PF13431 Tetratricopeptide repeat 626 655 5.6E-5 T 15-10-2018 THII_0185 6d97e11e0e10bf1c1960a3861c050c93 1107 Gene3D G3DSA:3.20.20.80 441 659 2.3E-9 T 15-10-2018 THII_0185 6d97e11e0e10bf1c1960a3861c050c93 1107 SUPERFAMILY SSF51445 456 809 7.98E-11 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily THII_0185 6d97e11e0e10bf1c1960a3861c050c93 1107 Gene3D G3DSA:3.90.550.10 154 386 1.9E-55 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0185 6d97e11e0e10bf1c1960a3861c050c93 1107 Pfam PF00535 Glycosyl transferase family 2 167 336 6.3E-28 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0185 6d97e11e0e10bf1c1960a3861c050c93 1107 SUPERFAMILY SSF53448 159 408 6.19E-57 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3762 55cfe416f3161bf5e36ef88ea810a9a9 394 Gene3D G3DSA:3.40.640.10 64 287 1.0E-134 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_3762 55cfe416f3161bf5e36ef88ea810a9a9 394 Pfam PF00155 Aminotransferase class I and II 33 388 2.3E-70 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 THII_3762 55cfe416f3161bf5e36ef88ea810a9a9 394 SUPERFAMILY SSF53383 4 392 1.25E-114 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_3762 55cfe416f3161bf5e36ef88ea810a9a9 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 15-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 THII_3762 55cfe416f3161bf5e36ef88ea810a9a9 394 Gene3D G3DSA:3.90.1150.10 27 388 1.0E-134 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_2819 419cdbb414ffef396c47e462a9e1c5dd 349 Pfam PF01040 UbiA prenyltransferase family 64 297 1.1E-18 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 THII_2819 419cdbb414ffef396c47e462a9e1c5dd 349 Gene3D G3DSA:1.10.357.140 50 171 3.3E-10 T 15-10-2018 THII_2901 d2dd537efca3e2face06c12042b96bf5 140 Gene3D G3DSA:3.10.129.10 1 140 4.7E-34 T 15-10-2018 THII_2901 d2dd537efca3e2face06c12042b96bf5 140 SUPERFAMILY SSF54637 1 138 1.28E-22 T 15-10-2018 IPR029069 HotDog domain superfamily THII_2594 cad79b4e2011489aafa9208663ab7b44 483 SUPERFAMILY SSF53383 3 479 3.84E-109 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_2594 cad79b4e2011489aafa9208663ab7b44 483 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 1 481 55.536 T 15-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 THII_2594 cad79b4e2011489aafa9208663ab7b44 483 Pfam PF02347 Glycine cleavage system P-protein 26 369 5.7E-10 T 15-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 THII_2594 cad79b4e2011489aafa9208663ab7b44 483 Gene3D G3DSA:3.90.1150.10 336 466 1.0E-40 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_2594 cad79b4e2011489aafa9208663ab7b44 483 Gene3D G3DSA:3.40.640.10 77 335 3.1E-58 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_1544 f2c5b2af43494c38d17e2b93e5df19d4 259 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 248 1.0E-84 T 15-10-2018 IPR017689 Outer membrane protein assembly factor BamD THII_1544 f2c5b2af43494c38d17e2b93e5df19d4 259 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 2 244 37.62 T 15-10-2018 IPR017689 Outer membrane protein assembly factor BamD THII_1544 f2c5b2af43494c38d17e2b93e5df19d4 259 SUPERFAMILY SSF48452 33 121 5.27E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1544 f2c5b2af43494c38d17e2b93e5df19d4 259 Pfam PF13525 Outer membrane lipoprotein 35 235 1.4E-68 T 15-10-2018 IPR039565 Outer membrane lipoprotein BamD-like THII_1544 f2c5b2af43494c38d17e2b93e5df19d4 259 Gene3D G3DSA:1.25.40.10 34 254 1.3E-57 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3840 4215f0c48ec446a3f7dd155f4236336a 66 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 18 51 0.0026 T 15-10-2018 IPR006530 YD repeat THII_3840 4215f0c48ec446a3f7dd155f4236336a 66 Pfam PF10049 Protein of unknown function (DUF2283) 2 50 2.3E-18 T 15-10-2018 IPR019270 Protein of unknown function DUF2283 THII_3907 9b033cbed2fdc7146c17018d9fc3af77 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.323 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS THII_3907 9b033cbed2fdc7146c17018d9fc3af77 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 10 104 2.1E-36 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS THII_3907 9b033cbed2fdc7146c17018d9fc3af77 118 SUPERFAMILY SSF81301 1 108 9.16E-38 T 15-10-2018 THII_3907 9b033cbed2fdc7146c17018d9fc3af77 118 Gene3D G3DSA:3.30.460.10 1 116 1.9E-36 T 15-10-2018 THII_3907 9b033cbed2fdc7146c17018d9fc3af77 118 Pfam PF02410 Ribosomal silencing factor during starvation 12 104 1.9E-25 T 15-10-2018 THII_1082 d7deb0f9e37a02469863d453322f26ba 170 Gene3D G3DSA:3.90.1570.10 11 170 2.7E-16 T 15-10-2018 THII_1082 d7deb0f9e37a02469863d453322f26ba 170 SUPERFAMILY SSF52980 56 169 2.31E-14 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1082 d7deb0f9e37a02469863d453322f26ba 170 Pfam PF05685 Putative restriction endonuclease 21 140 3.6E-14 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0298 5dcada0f036fc555ff65efd26e29805b 130 Gene3D G3DSA:3.30.1370.30 2 72 2.1E-25 T 15-10-2018 THII_0298 5dcada0f036fc555ff65efd26e29805b 130 Gene3D G3DSA:3.30.1490.10 73 129 3.9E-23 T 15-10-2018 THII_0298 5dcada0f036fc555ff65efd26e29805b 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0298 5dcada0f036fc555ff65efd26e29805b 130 SUPERFAMILY SSF56047 2 129 4.19E-43 T 15-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0298 5dcada0f036fc555ff65efd26e29805b 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.197 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0298 5dcada0f036fc555ff65efd26e29805b 130 Pfam PF00410 Ribosomal protein S8 5 129 1.3E-46 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 THII_0422 0695db4f501e5ea881499624596fc92a 110 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 2 92 1.5E-18 T 15-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 THII_0422 0695db4f501e5ea881499624596fc92a 110 PIRSF PIRSF020408 1 106 4.9E-33 T 15-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 THII_2013 d851bc92c4477287afa062c873518450 126 Gene3D G3DSA:3.10.450.40 2 126 1.8E-24 T 15-10-2018 THII_2013 d851bc92c4477287afa062c873518450 126 SUPERFAMILY SSF160719 27 124 6.28E-16 T 15-10-2018 THII_2013 d851bc92c4477287afa062c873518450 126 Pfam PF04965 Gene 25-like lysozyme 30 111 4.0E-11 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD THII_2817 e238bd9ff86943ea42f47077378ed759 314 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 THII_2817 e238bd9ff86943ea42f47077378ed759 314 Gene3D G3DSA:3.40.1190.20 1 311 5.2E-104 T 15-10-2018 IPR029056 Ribokinase-like THII_2817 e238bd9ff86943ea42f47077378ed759 314 SUPERFAMILY SSF53613 2 297 7.48E-60 T 15-10-2018 IPR029056 Ribokinase-like THII_2817 e238bd9ff86943ea42f47077378ed759 314 Pfam PF00294 pfkB family carbohydrate kinase 34 290 1.2E-38 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB THII_1148 316f07dfc1b151bad3f5a281021e93ac 188 Pfam PF09626 Dihaem cytochrome c 37 158 1.6E-40 T 15-10-2018 IPR018588 Dihaem cytochrome c THII_1649 254501409dbb9147b88ca1cd97090d94 334 SUPERFAMILY SSF51735 1 325 4.16E-95 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1649 254501409dbb9147b88ca1cd97090d94 334 Gene3D G3DSA:3.90.25.10 174 307 1.4E-123 T 15-10-2018 THII_1649 254501409dbb9147b88ca1cd97090d94 334 Gene3D G3DSA:3.40.50.720 4 253 1.4E-123 T 15-10-2018 THII_1649 254501409dbb9147b88ca1cd97090d94 334 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 323 2.1E-130 T 15-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 THII_1649 254501409dbb9147b88ca1cd97090d94 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 253 5.1E-56 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 THII_1961 05e5ef996b2b49451b3b7035634396fe 201 PIRSF PIRSF028688 8 190 4.3E-13 T 15-10-2018 IPR014549 Flagellar protein FlgO THII_1067 3a8dde68c4e7e3a9074a62ec490a7f7d 55 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 17 54 3.0E-8 T 15-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system THII_2343 cca6d023a74d3e1701c349013ea4bb3c 488 Gene3D G3DSA:1.20.5.570 455 488 4.5E-13 T 15-10-2018 THII_2343 cca6d023a74d3e1701c349013ea4bb3c 488 SUPERFAMILY SSF50475 3 322 8.24E-125 T 15-10-2018 THII_2343 cca6d023a74d3e1701c349013ea4bb3c 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 6.4E-165 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 THII_2343 cca6d023a74d3e1701c349013ea4bb3c 488 SUPERFAMILY SSF143968 323 485 2.22E-61 T 15-10-2018 THII_2343 cca6d023a74d3e1701c349013ea4bb3c 488 Gene3D G3DSA:3.40.1670.10 337 454 2.4E-47 T 15-10-2018 THII_2343 cca6d023a74d3e1701c349013ea4bb3c 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 4.0E-166 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 THII_1623 b4d3c570a3b28c796abdff0f75aabe30 68 Pfam PF10130 PIN domain 14 50 4.3E-8 T 15-10-2018 IPR002716 PIN domain THII_2037 c70b74ce35b43ea10d385d38cbe235ea 69 SUPERFAMILY SSF143100 3 46 6.93E-10 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like THII_2854 00216abf25a98982e21bc5505f4e7ec9 322 Pfam PF01944 Stage II sporulation protein M 116 288 7.6E-29 T 15-10-2018 IPR002798 Stage II sporulation protein M-like THII_0936 dc74a9856c04046d70ba2d9e0f3eb9be 149 Gene3D G3DSA:3.90.79.10 4 148 4.2E-35 T 15-10-2018 THII_0936 dc74a9856c04046d70ba2d9e0f3eb9be 149 SUPERFAMILY SSF55811 7 145 2.17E-25 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 THII_0936 dc74a9856c04046d70ba2d9e0f3eb9be 149 PRINTS PR01404 DATP pyrophosphohydrolase signature 102 123 7.3E-9 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 THII_0936 dc74a9856c04046d70ba2d9e0f3eb9be 149 PRINTS PR01404 DATP pyrophosphohydrolase signature 24 45 7.3E-9 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 THII_0936 dc74a9856c04046d70ba2d9e0f3eb9be 149 PRINTS PR01404 DATP pyrophosphohydrolase signature 129 142 7.3E-9 T 15-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 THII_0936 dc74a9856c04046d70ba2d9e0f3eb9be 149 Pfam PF00293 NUDIX domain 10 133 5.0E-19 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 THII_0936 dc74a9856c04046d70ba2d9e0f3eb9be 149 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 THII_1393 42d9cd70d2ae06216e511a645ad424da 343 Gene3D G3DSA:1.10.3720.10 133 340 5.0E-17 T 15-10-2018 IPR035906 MetI-like superfamily THII_1393 42d9cd70d2ae06216e511a645ad424da 343 SUPERFAMILY SSF161098 138 325 1.57E-19 T 15-10-2018 IPR035906 MetI-like superfamily THII_1393 42d9cd70d2ae06216e511a645ad424da 343 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 47 4.5E-5 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain THII_1393 42d9cd70d2ae06216e511a645ad424da 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 1.0E-26 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 THII_1140 bdbd147a4f78a1c70cac57fe21064c00 1468 Pfam PF00535 Glycosyl transferase family 2 33 130 2.5E-14 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_1140 bdbd147a4f78a1c70cac57fe21064c00 1468 Pfam PF13692 Glycosyl transferases group 1 1299 1434 2.5E-25 T 15-10-2018 THII_1140 bdbd147a4f78a1c70cac57fe21064c00 1468 Gene3D G3DSA:3.40.50.2000 1293 1453 5.7E-19 T 15-10-2018 THII_1140 bdbd147a4f78a1c70cac57fe21064c00 1468 SUPERFAMILY SSF53756 1127 1462 7.53E-27 T 15-10-2018 THII_1140 bdbd147a4f78a1c70cac57fe21064c00 1468 SUPERFAMILY SSF53448 26 263 3.02E-33 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1140 bdbd147a4f78a1c70cac57fe21064c00 1468 Gene3D G3DSA:3.90.550.10 3 270 1.9E-32 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1772 ddd1e10c5baacc1ae79c89dcf96ef07b 505 Pfam PF03023 MviN-like protein 20 457 7.2E-145 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_1772 ddd1e10c5baacc1ae79c89dcf96ef07b 505 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 459 19.885 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_1772 ddd1e10c5baacc1ae79c89dcf96ef07b 505 PRINTS PR01806 Virulence factor MviN signature 251 277 6.4E-80 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_1772 ddd1e10c5baacc1ae79c89dcf96ef07b 505 PRINTS PR01806 Virulence factor MviN signature 25 44 6.4E-80 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_1772 ddd1e10c5baacc1ae79c89dcf96ef07b 505 PRINTS PR01806 Virulence factor MviN signature 125 149 6.4E-80 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_1772 ddd1e10c5baacc1ae79c89dcf96ef07b 505 PRINTS PR01806 Virulence factor MviN signature 349 368 6.4E-80 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_1772 ddd1e10c5baacc1ae79c89dcf96ef07b 505 PRINTS PR01806 Virulence factor MviN signature 401 418 6.4E-80 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_1772 ddd1e10c5baacc1ae79c89dcf96ef07b 505 PRINTS PR01806 Virulence factor MviN signature 44 60 6.4E-80 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_1772 ddd1e10c5baacc1ae79c89dcf96ef07b 505 PRINTS PR01806 Virulence factor MviN signature 149 170 6.4E-80 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_1772 ddd1e10c5baacc1ae79c89dcf96ef07b 505 PIRSF PIRSF002869 1 503 1.7E-166 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_1772 ddd1e10c5baacc1ae79c89dcf96ef07b 505 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 493 1.7E-145 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ THII_3837 f37674b3f9f72956d364091fb421df78 176 SUPERFAMILY SSF55021 4 77 2.04E-12 T 15-10-2018 THII_3837 f37674b3f9f72956d364091fb421df78 176 SUPERFAMILY SSF55021 92 159 2.75E-10 T 15-10-2018 THII_3837 f37674b3f9f72956d364091fb421df78 176 Pfam PF13740 ACT domain 5 75 2.0E-7 T 15-10-2018 THII_3837 f37674b3f9f72956d364091fb421df78 176 Pfam PF01842 ACT domain 92 124 1.8E-6 T 15-10-2018 IPR002912 ACT domain THII_3837 f37674b3f9f72956d364091fb421df78 176 Gene3D G3DSA:3.30.70.260 1 82 3.3E-15 T 15-10-2018 THII_3837 f37674b3f9f72956d364091fb421df78 176 Gene3D G3DSA:3.30.70.260 88 169 1.3E-12 T 15-10-2018 THII_1561 904a70a6905b73e5c0d7334616af3560 92 SUPERFAMILY SSF55008 2 63 7.72E-13 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 THII_1561 904a70a6905b73e5c0d7334616af3560 92 Pfam PF00403 Heavy-metal-associated domain 5 62 4.2E-11 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 THII_1561 904a70a6905b73e5c0d7334616af3560 92 Gene3D G3DSA:3.30.70.100 4 65 1.6E-12 T 15-10-2018 THII_0414 778aba678f32296dbfcac9b0ab9f46c0 253 Pfam PF02698 DUF218 domain 90 226 2.4E-18 T 15-10-2018 IPR003848 Domain of unknown function DUF218 THII_1385 6bd08224dc3194f8bc176139609b7f4b 333 SUPERFAMILY SSF51735 19 297 8.4E-12 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1385 6bd08224dc3194f8bc176139609b7f4b 333 Gene3D G3DSA:3.40.50.720 102 282 5.4E-12 T 15-10-2018 THII_1385 6bd08224dc3194f8bc176139609b7f4b 333 Gene3D G3DSA:3.90.25.10 180 275 5.4E-12 T 15-10-2018 THII_2182 28f43394341c0099f4768d201c65c5ee 294 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 THII_2182 28f43394341c0099f4768d201c65c5ee 294 Pfam PF00294 pfkB family carbohydrate kinase 1 287 3.9E-30 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB THII_2182 28f43394341c0099f4768d201c65c5ee 294 SUPERFAMILY SSF53613 1 285 1.71E-45 T 15-10-2018 IPR029056 Ribokinase-like THII_2182 28f43394341c0099f4768d201c65c5ee 294 Gene3D G3DSA:3.40.1190.20 2 287 1.5E-70 T 15-10-2018 IPR029056 Ribokinase-like THII_0736 d9e218abc74f14f47a9c2049e16c2258 391 Gene3D G3DSA:3.90.1150.10 263 391 1.5E-22 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_0736 d9e218abc74f14f47a9c2049e16c2258 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 384 2.7E-110 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_0736 d9e218abc74f14f47a9c2049e16c2258 391 SUPERFAMILY SSF53383 7 390 2.5E-107 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_0736 d9e218abc74f14f47a9c2049e16c2258 391 Gene3D G3DSA:3.40.640.10 1 261 9.5E-99 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_0736 d9e218abc74f14f47a9c2049e16c2258 391 PIRSF PIRSF000390 4 391 5.6E-110 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THII_0768 99f1de40f2ea70fc58fa9c0dacb48c32 129 SUPERFAMILY SSF50249 66 128 6.12E-13 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold THII_0768 99f1de40f2ea70fc58fa9c0dacb48c32 129 PRINTS PR00050 Cold shock protein signature 67 82 2.3E-5 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 THII_0768 99f1de40f2ea70fc58fa9c0dacb48c32 129 PRINTS PR00050 Cold shock protein signature 87 96 2.3E-5 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 THII_0768 99f1de40f2ea70fc58fa9c0dacb48c32 129 Pfam PF00313 'Cold-shock' DNA-binding domain 66 126 3.6E-15 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 THII_0768 99f1de40f2ea70fc58fa9c0dacb48c32 129 SMART SM00357 66 128 7.2E-10 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 THII_0768 99f1de40f2ea70fc58fa9c0dacb48c32 129 Gene3D G3DSA:2.40.50.140 65 127 1.4E-15 T 15-10-2018 THII_1386 6c31f7a853ecc5ae786766feca6f4463 399 Gene3D G3DSA:3.40.50.300 116 284 2.6E-6 T 15-10-2018 THII_1386 6c31f7a853ecc5ae786766feca6f4463 399 SUPERFAMILY SSF52540 118 367 2.85E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2815 9e57b7333a19075d2f9242b5ea6db3f4 141 SUPERFAMILY SSF46785 4 132 1.36E-43 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily THII_2815 9e57b7333a19075d2f9242b5ea6db3f4 141 Gene3D G3DSA:3.30.1490.190 84 138 1.0E-21 T 15-10-2018 THII_2815 9e57b7333a19075d2f9242b5ea6db3f4 141 Gene3D G3DSA:1.10.10.10 1 82 4.5E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily THII_2815 9e57b7333a19075d2f9242b5ea6db3f4 141 Pfam PF01475 Ferric uptake regulator family 8 128 1.9E-43 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 THII_3830 bf8260e1b53a41526a22f21efa53044d 170 Gene3D G3DSA:3.90.1570.10 8 169 1.6E-20 T 15-10-2018 THII_3830 bf8260e1b53a41526a22f21efa53044d 170 Pfam PF05685 Putative restriction endonuclease 19 142 1.3E-12 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3830 bf8260e1b53a41526a22f21efa53044d 170 SUPERFAMILY SSF52980 18 166 9.65E-16 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0533 4e655ab1598d80e590fd19be3abd6dff 438 PIRSF PIRSF001362 5 433 7.1E-236 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 THII_0533 4e655ab1598d80e590fd19be3abd6dff 438 SUPERFAMILY SSF51621 15 430 9.87E-154 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 THII_0533 4e655ab1598d80e590fd19be3abd6dff 438 ProSitePatterns PS00161 Isocitrate lyase signature. 191 196 - T 15-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 THII_0533 4e655ab1598d80e590fd19be3abd6dff 438 Pfam PF00463 Isocitrate lyase family 19 253 4.5E-60 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 THII_0533 4e655ab1598d80e590fd19be3abd6dff 438 Pfam PF00463 Isocitrate lyase family 255 430 6.0E-48 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 THII_0533 4e655ab1598d80e590fd19be3abd6dff 438 Gene3D G3DSA:3.20.20.60 10 413 6.2E-175 T 15-10-2018 THII_0533 4e655ab1598d80e590fd19be3abd6dff 438 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 14 253 2.8E-103 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 THII_0120 5981c37b2c040e2f615ef7b1f965ea2e 255 Pfam PF05096 Glutamine cyclotransferase 19 249 2.0E-93 T 15-10-2018 IPR007788 Glutaminyl-peptide cyclotransferase GO:0016603|GO:0017186 MetaCyc: PWY-7942 THII_0120 5981c37b2c040e2f615ef7b1f965ea2e 255 SUPERFAMILY SSF50969 22 245 2.75E-13 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like THII_0336 2255e1bd4070d095bbe14f3654bf4fed 274 SUPERFAMILY SSF52540 34 209 1.62E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0336 2255e1bd4070d095bbe14f3654bf4fed 274 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 187 268 8.3E-30 T 15-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal THII_0336 2255e1bd4070d095bbe14f3654bf4fed 274 Pfam PF07728 AAA domain (dynein-related subfamily) 40 174 6.4E-35 T 15-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 THII_0336 2255e1bd4070d095bbe14f3654bf4fed 274 Gene3D G3DSA:3.40.50.300 26 192 3.8E-29 T 15-10-2018 THII_3372 5d592849d9f3e8f4b278ed9290bbf0ec 361 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 158 352 2.2E-32 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3372 5d592849d9f3e8f4b278ed9290bbf0ec 361 SMART SM00331 132 352 6.2E-40 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_3372 5d592849d9f3e8f4b278ed9290bbf0ec 361 Gene3D G3DSA:3.60.40.10 98 355 5.8E-52 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 THII_0787 590f30d432b3487e06e7cf92807be6e1 325 SUPERFAMILY SSF53067 11 170 4.86E-9 T 15-10-2018 THII_0787 590f30d432b3487e06e7cf92807be6e1 325 SUPERFAMILY SSF53067 179 324 7.66E-8 T 15-10-2018 THII_0787 590f30d432b3487e06e7cf92807be6e1 325 Gene3D G3DSA:3.30.420.40 13 322 1.8E-16 T 15-10-2018 THII_0787 590f30d432b3487e06e7cf92807be6e1 325 Gene3D G3DSA:3.30.420.40 175 309 1.8E-16 T 15-10-2018 THII_1475 157686ecb23f4662189ecd792be16051 183 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 171 70.702 T 15-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria THII_1475 157686ecb23f4662189ecd792be16051 183 Pfam PF03350 Uncharacterized protein family, UPF0114 11 128 6.4E-34 T 15-10-2018 IPR005134 Uncharacterised protein family UPF0114 THII_1475 157686ecb23f4662189ecd792be16051 183 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 4 167 1.1E-50 T 15-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria THII_0002 b583d8bb3d6a4e3be531e62c28209dc4 145 Gene3D G3DSA:1.20.1220.20 2 145 1.8E-33 T 15-10-2018 THII_0002 b583d8bb3d6a4e3be531e62c28209dc4 145 Pfam PF01724 Domain of unknown function DUF29 7 142 4.2E-54 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1145 7a0431eb6c541845faa5c3d1047577f1 337 Pfam PF14269 Arylsulfotransferase (ASST) 113 321 2.6E-15 T 15-10-2018 IPR039535 Arylsulfotransferase-like THII_1145 7a0431eb6c541845faa5c3d1047577f1 337 SUPERFAMILY SSF50998 54 327 4.71E-7 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily THII_1922 9b6d1a2a2088d9cc3cd17100c54383fb 158 SMART SM00028 44 77 1.2E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1922 9b6d1a2a2088d9cc3cd17100c54383fb 158 SMART SM00028 78 111 250.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1922 9b6d1a2a2088d9cc3cd17100c54383fb 158 Gene3D G3DSA:1.25.40.10 27 157 2.4E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1922 9b6d1a2a2088d9cc3cd17100c54383fb 158 SUPERFAMILY SSF48452 28 150 6.78E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1922 9b6d1a2a2088d9cc3cd17100c54383fb 158 Pfam PF13432 Tetratricopeptide repeat 51 100 5.9E-8 T 15-10-2018 THII_0009 c7bb75e098950452673fb1a38dd8a1ec 315 Pfam PF08012 Protein of unknown function (DUF1702) 5 309 2.3E-122 T 15-10-2018 IPR012964 Protein of unknown function DUF1702 THII_2892 042c01c95ef24eae998297b49a5e5bd6 146 SUPERFAMILY SSF160387 57 114 6.8E-11 T 15-10-2018 THII_2892 042c01c95ef24eae998297b49a5e5bd6 146 Pfam PF05573 NosL 18 109 7.0E-7 T 15-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL THII_0651 52d5df4b586e42e9ea66ca67109a17de 305 SUPERFAMILY SSF74653 104 300 4.84E-20 T 15-10-2018 THII_0651 52d5df4b586e42e9ea66ca67109a17de 305 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 219 298 3.3E-17 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 THII_0651 52d5df4b586e42e9ea66ca67109a17de 305 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 221 298 5.0E-15 T 15-10-2018 IPR006260 TonB/TolA, C-terminal THII_3455 a090322c73de97eb12e642f83f26f192 375 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 15-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 SMART SM01005 235 356 9.0E-65 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 PRINTS PR00992 Alanine racemase signature 62 80 2.6E-73 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 PRINTS PR00992 Alanine racemase signature 268 283 2.6E-73 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 PRINTS PR00992 Alanine racemase signature 27 43 2.6E-73 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 PRINTS PR00992 Alanine racemase signature 341 354 2.6E-73 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 PRINTS PR00992 Alanine racemase signature 122 134 2.6E-73 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 PRINTS PR00992 Alanine racemase signature 251 266 2.6E-73 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 PRINTS PR00992 Alanine racemase signature 289 306 2.6E-73 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 PRINTS PR00992 Alanine racemase signature 157 168 2.6E-73 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 PRINTS PR00992 Alanine racemase signature 194 221 2.6E-73 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 Hamap MF_01201 Alanine racemase. 2 359 35.718 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 SUPERFAMILY SSF50621 230 356 8.37E-47 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 THII_3455 a090322c73de97eb12e642f83f26f192 375 TIGRFAM TIGR00492 alr: alanine racemase 4 356 1.6E-126 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 Pfam PF01168 Alanine racemase, N-terminal domain 9 221 5.4E-72 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 Gene3D G3DSA:3.20.20.10 11 219 1.9E-132 T 15-10-2018 IPR029066 PLP-binding barrel THII_3455 a090322c73de97eb12e642f83f26f192 375 Pfam PF00842 Alanine racemase, C-terminal domain 235 354 5.0E-43 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 THII_3455 a090322c73de97eb12e642f83f26f192 375 Gene3D G3DSA:2.40.37.10 9 354 1.9E-132 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 THII_3455 a090322c73de97eb12e642f83f26f192 375 SUPERFAMILY SSF51419 9 236 9.52E-74 T 15-10-2018 IPR029066 PLP-binding barrel THII_0653 3bb8b8e60380236f66ccd49f563cb8b9 57 Pfam PF08410 Domain of unknown function (DUF1737) 7 46 2.7E-6 T 15-10-2018 IPR013619 Domain of unknown function DUF1737 THII_0836 d0017c081a6cb638bce758ad927ceef2 121 Pfam PF09361 Phasin protein 8 104 6.3E-18 T 15-10-2018 IPR018968 Phasin THII_0836 d0017c081a6cb638bce758ad927ceef2 121 TIGRFAM TIGR01841 phasin: phasin family protein 28 104 3.3E-11 T 15-10-2018 IPR010127 Phasin, subfamily 1 THII_1273 11ce9290922b8824c23d824bae09d32f 296 Gene3D G3DSA:3.90.25.10 167 291 2.2E-106 T 15-10-2018 THII_1273 11ce9290922b8824c23d824bae09d32f 296 Gene3D G3DSA:3.40.50.720 8 284 2.2E-106 T 15-10-2018 THII_1273 11ce9290922b8824c23d824bae09d32f 296 Pfam PF04321 RmlD substrate binding domain 7 294 3.6E-101 T 15-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 THII_1273 11ce9290922b8824c23d824bae09d32f 296 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 7 294 2.8E-100 T 15-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 THII_1273 11ce9290922b8824c23d824bae09d32f 296 SUPERFAMILY SSF51735 7 294 5.37E-92 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3945 9dce9d1e886dfe1b830c218959bb0dc4 355 Gene3D G3DSA:2.40.30.170 52 276 1.1E-77 T 15-10-2018 THII_3945 9dce9d1e886dfe1b830c218959bb0dc4 355 Gene3D G3DSA:2.40.50.100 65 193 1.1E-77 T 15-10-2018 THII_3945 9dce9d1e886dfe1b830c218959bb0dc4 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 266 1.7E-35 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THII_3945 9dce9d1e886dfe1b830c218959bb0dc4 355 Gene3D G3DSA:2.40.420.20 277 344 1.1E-77 T 15-10-2018 THII_3945 9dce9d1e886dfe1b830c218959bb0dc4 355 Gene3D G3DSA:1.10.287.470 100 159 1.1E-77 T 15-10-2018 THII_3945 9dce9d1e886dfe1b830c218959bb0dc4 355 SUPERFAMILY SSF111369 56 270 4.58E-46 T 15-10-2018 THII_3945 9dce9d1e886dfe1b830c218959bb0dc4 355 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 346 1.3E-82 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 THII_0938 745046b565f805ff5be93731e154a2b4 524 Pfam PF08242 Methyltransferase domain 44 141 6.1E-14 T 15-10-2018 IPR013217 Methyltransferase type 12 THII_0938 745046b565f805ff5be93731e154a2b4 524 Pfam PF10119 Predicted methyltransferase regulatory domain 215 292 4.4E-18 T 15-10-2018 IPR018773 Methyltransferase regulatory domain, predicted THII_0938 745046b565f805ff5be93731e154a2b4 524 SUPERFAMILY SSF53335 13 188 3.92E-29 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0938 745046b565f805ff5be93731e154a2b4 524 Gene3D G3DSA:3.40.50.150 7 262 3.0E-24 T 15-10-2018 THII_2639 fe5632cd6d25b51e31f6d4d9c5ca3131 411 Gene3D G3DSA:3.90.550.10 35 273 8.8E-29 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2639 fe5632cd6d25b51e31f6d4d9c5ca3131 411 Pfam PF13641 Glycosyltransferase like family 2 49 273 1.4E-27 T 15-10-2018 THII_2639 fe5632cd6d25b51e31f6d4d9c5ca3131 411 SUPERFAMILY SSF53448 50 319 7.67E-39 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2809 70563d84e9f516307bb9d93cc9d4fdc8 137 Pfam PF10861 Protein of Unknown function (DUF2784) 7 126 1.0E-31 T 15-10-2018 IPR021218 Protein of unknown function DUF2784 THII_3175 5888516285f7e44b5c39b6de2a79f784 220 Pfam PF05685 Putative restriction endonuclease 21 185 1.7E-29 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3175 5888516285f7e44b5c39b6de2a79f784 220 Gene3D G3DSA:3.90.1570.10 13 191 4.4E-14 T 15-10-2018 THII_3175 5888516285f7e44b5c39b6de2a79f784 220 SUPERFAMILY SSF52980 7 188 2.95E-30 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1738 e5117b88c0fb9245bb7889c1f32ba379 174 PIRSF PIRSF002094 1 169 2.2E-46 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 THII_1738 e5117b88c0fb9245bb7889c1f32ba379 174 SMART SM00935 13 166 2.1E-45 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 THII_1738 e5117b88c0fb9245bb7889c1f32ba379 174 Pfam PF03938 Outer membrane protein (OmpH-like) 13 165 1.4E-30 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 THII_1738 e5117b88c0fb9245bb7889c1f32ba379 174 Gene3D G3DSA:3.30.910.20 24 166 1.2E-37 T 15-10-2018 IPR024930 Skp domain superfamily THII_1738 e5117b88c0fb9245bb7889c1f32ba379 174 SUPERFAMILY SSF111384 25 166 3.27E-29 T 15-10-2018 THII_2194 0413534d043e4f0ef6678fa6019979a2 106 Pfam PF00550 Phosphopantetheine attachment site 45 99 2.3E-6 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain THII_2194 0413534d043e4f0ef6678fa6019979a2 106 Gene3D G3DSA:1.10.1200.10 26 103 5.6E-20 T 15-10-2018 IPR036736 ACP-like superfamily THII_2194 0413534d043e4f0ef6678fa6019979a2 106 SUPERFAMILY SSF47336 25 103 4.45E-13 T 15-10-2018 IPR036736 ACP-like superfamily THII_3168 70fb46160e304ea82f18a3227095e291 255 Gene3D G3DSA:3.40.190.10 109 214 1.9E-68 T 15-10-2018 THII_3168 70fb46160e304ea82f18a3227095e291 255 PIRSF PIRSF004846 1 255 5.2E-37 T 15-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 THII_3168 70fb46160e304ea82f18a3227095e291 255 SUPERFAMILY SSF53850 29 254 1.45E-53 T 15-10-2018 THII_3168 70fb46160e304ea82f18a3227095e291 255 Gene3D G3DSA:3.40.190.10 33 252 1.9E-68 T 15-10-2018 THII_3168 70fb46160e304ea82f18a3227095e291 255 Pfam PF13531 Bacterial extracellular solute-binding protein 30 252 1.4E-35 T 15-10-2018 THII_3168 70fb46160e304ea82f18a3227095e291 255 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 251 3.0E-54 T 15-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 THII_3014 81b075c291a35cd86621f55c988ff6b9 134 Pfam PF13358 DDE superfamily endonuclease 2 121 1.5E-25 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_3014 81b075c291a35cd86621f55c988ff6b9 134 Gene3D G3DSA:3.30.420.470 3 132 2.2E-12 T 15-10-2018 THII_3590 90726e7a14e243bdd1a77552d2870d57 167 Pfam PF02620 Uncharacterized ACR, COG1399 61 166 1.3E-14 T 15-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD THII_2478 b81158aaa138c936e2b97971618e89b8 253 Pfam PF03741 Integral membrane protein TerC family 14 201 8.4E-48 T 15-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 THII_0808 36e828cd3b08678a4f32261a5821ac11 241 Gene3D G3DSA:3.40.50.300 9 239 9.6E-63 T 15-10-2018 THII_0808 36e828cd3b08678a4f32261a5821ac11 241 Pfam PF00005 ABC transporter 31 174 4.3E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 THII_0808 36e828cd3b08678a4f32261a5821ac11 241 SUPERFAMILY SSF52540 12 229 7.55E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0808 36e828cd3b08678a4f32261a5821ac11 241 SMART SM00382 40 223 1.1E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain THII_0808 36e828cd3b08678a4f32261a5821ac11 241 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 THII_2468 da85e7de3a84ecbd568aed9def0e1042 155 Gene3D G3DSA:3.30.450.20 16 151 2.0E-24 T 15-10-2018 THII_2468 da85e7de3a84ecbd568aed9def0e1042 155 Pfam PF08447 PAS fold 52 135 2.8E-13 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 THII_2468 da85e7de3a84ecbd568aed9def0e1042 155 SUPERFAMILY SSF55785 41 135 1.34E-24 T 15-10-2018 IPR035965 PAS domain superfamily THII_2468 da85e7de3a84ecbd568aed9def0e1042 155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 42 146 9.7E-13 T 15-10-2018 IPR000014 PAS domain THII_0913 c72ab7ff2c3d2e7ff4ac43b90589b86f 226 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 62 188 9.0E-29 T 15-10-2018 THII_0683 54faddcc8bd0de7cee8d2b87eab4cc06 261 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 THII_0683 54faddcc8bd0de7cee8d2b87eab4cc06 261 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 252 9.7E-83 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 THII_0683 54faddcc8bd0de7cee8d2b87eab4cc06 261 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 259 4.7E-83 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 THII_0683 54faddcc8bd0de7cee8d2b87eab4cc06 261 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 259 20.411 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 THII_1784 793a49b8537a858a0a61103451412838 423 Gene3D G3DSA:3.40.190.10 92 397 7.3E-155 T 15-10-2018 THII_1784 793a49b8537a858a0a61103451412838 423 SUPERFAMILY SSF53850 2 251 6.4E-28 T 15-10-2018 THII_1784 793a49b8537a858a0a61103451412838 423 Gene3D G3DSA:3.40.190.10 6 393 7.3E-155 T 15-10-2018 THII_1784 793a49b8537a858a0a61103451412838 423 Pfam PF13379 NMT1-like family 2 263 1.3E-95 T 15-10-2018 THII_0113 df4bc3416b67c1f3d90b3d2d1fa05fb4 326 Gene3D G3DSA:3.40.50.10330 80 149 1.0E-9 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 THII_0113 df4bc3416b67c1f3d90b3d2d1fa05fb4 326 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 93 - T 15-10-2018 IPR010916 TonB box, conserved site THII_0113 df4bc3416b67c1f3d90b3d2d1fa05fb4 326 SUPERFAMILY SSF111331 74 209 7.52E-16 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily THII_0113 df4bc3416b67c1f3d90b3d2d1fa05fb4 326 Gene3D G3DSA:2.60.200.30 150 207 1.0E-9 T 15-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 THII_2204 f19043acc11ba0b2461a4482a6eb5ca5 284 Gene3D G3DSA:1.10.1040.10 188 284 1.7E-31 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 THII_2204 f19043acc11ba0b2461a4482a6eb5ca5 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 1.2E-30 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 THII_2204 f19043acc11ba0b2461a4482a6eb5ca5 284 PIRSF PIRSF000105 1 284 5.5E-87 T 15-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 THII_2204 f19043acc11ba0b2461a4482a6eb5ca5 284 Gene3D G3DSA:3.40.50.720 1 187 2.6E-60 T 15-10-2018 THII_2204 f19043acc11ba0b2461a4482a6eb5ca5 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 3.2E-56 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 THII_2204 f19043acc11ba0b2461a4482a6eb5ca5 284 SUPERFAMILY SSF48179 185 283 1.87E-31 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 THII_2204 f19043acc11ba0b2461a4482a6eb5ca5 284 SUPERFAMILY SSF51735 1 185 2.96E-52 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_1336 d00fad4bd441756cd15f3f3332d0eca9 105 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 88 4.2E-34 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 THII_1336 d00fad4bd441756cd15f3f3332d0eca9 105 Gene3D G3DSA:1.10.287.1080 1 95 8.7E-33 T 15-10-2018 THII_1336 d00fad4bd441756cd15f3f3332d0eca9 105 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 88 22.178 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 THII_1336 d00fad4bd441756cd15f3f3332d0eca9 105 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 6 91 6.1E-19 T 15-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 THII_1336 d00fad4bd441756cd15f3f3332d0eca9 105 SUPERFAMILY SSF101386 4 92 6.35E-28 T 15-10-2018 THII_1170 478270b9814f4208dd3e73e9345d2c4b 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 43 3.1E-7 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_1170 478270b9814f4208dd3e73e9345d2c4b 73 SUPERFAMILY SSF143120 1 49 3.01E-6 T 15-10-2018 IPR036165 YefM-like superfamily THII_0412 7d9bea2210715e7306fe7ba1129e869d 189 Pfam PF03848 Tellurite resistance protein TehB 34 168 5.4E-11 T 15-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain THII_0412 7d9bea2210715e7306fe7ba1129e869d 189 Gene3D G3DSA:3.40.50.150 6 188 2.9E-25 T 15-10-2018 THII_0412 7d9bea2210715e7306fe7ba1129e869d 189 SUPERFAMILY SSF53335 5 169 9.28E-24 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3742 bf5b70a00efdbaa10a03166817ac12bb 144 ProDom PD065237 RESTRICTION MA4585 ORF11 MM1264 PRECURSOR HGICIIM SYSTEM 5'REGION SIGNAL SIMILAR 42 134 4.0E-21 T 15-10-2018 IPR020391 Uncharacterised protein family 10.2kDa THII_3550 ac6732776a2e83e1349a4933aaf459fc 351 SUPERFAMILY SSF56935 30 328 1.96E-7 T 15-10-2018 THII_3550 ac6732776a2e83e1349a4933aaf459fc 351 Gene3D G3DSA:2.40.160.10 140 350 2.5E-5 T 15-10-2018 IPR023614 Porin domain superfamily THII_3396 0d170706d638f942eaab91726b41e2bd 402 SUPERFAMILY SSF53383 3 390 4.62E-109 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase THII_3396 0d170706d638f942eaab91726b41e2bd 402 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 15-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 THII_3396 0d170706d638f942eaab91726b41e2bd 402 Gene3D G3DSA:3.90.1150.10 289 386 1.3E-128 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 THII_3396 0d170706d638f942eaab91726b41e2bd 402 Pfam PF00155 Aminotransferase class I and II 32 371 3.5E-55 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 THII_3396 0d170706d638f942eaab91726b41e2bd 402 Gene3D G3DSA:3.40.640.10 64 288 1.3E-128 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 THII_3426 a254f6400637e518acc7faf4d063ccce 509 SUPERFAMILY SSF56300 267 504 9.74E-44 T 15-10-2018 THII_3426 a254f6400637e518acc7faf4d063ccce 509 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 267 471 2.7E-14 T 15-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 THII_3426 a254f6400637e518acc7faf4d063ccce 509 Gene3D G3DSA:3.60.21.10 264 506 3.9E-50 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like THII_2750 f5b781b89fb143a7fbc01a8ab68e2ffd 156 Gene3D G3DSA:1.20.1220.20 3 156 3.1E-28 T 15-10-2018 THII_2750 f5b781b89fb143a7fbc01a8ab68e2ffd 156 Pfam PF01724 Domain of unknown function DUF29 8 152 1.2E-49 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1480 f64f639ea4072ebf3b7cb59ace8fa4c2 260 SUPERFAMILY SSF141523 85 252 1.7E-22 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like THII_1480 f64f639ea4072ebf3b7cb59ace8fa4c2 260 Pfam PF03734 L,D-transpeptidase catalytic domain 91 251 1.8E-16 T 15-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 THII_1480 f64f639ea4072ebf3b7cb59ace8fa4c2 260 Gene3D G3DSA:2.40.440.10 42 260 1.2E-32 T 15-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like THII_2800 19d438ae142155fc91d068d45fbf65c0 446 SUPERFAMILY SSF102114 38 430 6.02E-88 T 15-10-2018 THII_2800 19d438ae142155fc91d068d45fbf65c0 446 Gene3D G3DSA:3.80.30.20 24 363 2.8E-88 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe THII_2800 19d438ae142155fc91d068d45fbf65c0 446 SMART SM00729 59 283 1.6E-43 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 THII_2800 19d438ae142155fc91d068d45fbf65c0 446 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 61 423 6.1E-64 T 15-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 THII_2800 19d438ae142155fc91d068d45fbf65c0 446 Pfam PF04055 Radical SAM superfamily 64 236 9.3E-15 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_2340 f1236df1b64eb996c47c51c4d35d2e1f 59 PIRSF PIRSF000071 4 59 1.0E-23 T 15-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 THII_2340 f1236df1b64eb996c47c51c4d35d2e1f 59 ProSitePatterns PS00202 Rubredoxin signature. 37 47 - T 15-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 THII_2340 f1236df1b64eb996c47c51c4d35d2e1f 59 Pfam PF00301 Rubredoxin 7 53 5.3E-22 T 15-10-2018 IPR024935 Rubredoxin domain GO:0005506 THII_2340 f1236df1b64eb996c47c51c4d35d2e1f 59 SUPERFAMILY SSF57802 4 57 2.86E-22 T 15-10-2018 THII_2340 f1236df1b64eb996c47c51c4d35d2e1f 59 Gene3D G3DSA:2.20.28.10 1 59 4.0E-27 T 15-10-2018 THII_2340 f1236df1b64eb996c47c51c4d35d2e1f 59 PRINTS PR00163 Rubredoxin signature 37 53 7.8E-8 T 15-10-2018 IPR024935 Rubredoxin domain GO:0005506 THII_2340 f1236df1b64eb996c47c51c4d35d2e1f 59 PRINTS PR00163 Rubredoxin signature 7 23 7.8E-8 T 15-10-2018 IPR024935 Rubredoxin domain GO:0005506 THII_1264 22f1ac36db69b6a40819a987443df7b4 504 SUPERFAMILY SSF50969 276 478 3.06E-8 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like THII_0092 74cfc76666ccef7d249841a88b5414a8 238 Pfam PF11306 Protein of unknown function (DUF3108) 25 221 4.5E-28 T 15-10-2018 IPR021457 Protein of unknown function DUF3108 THII_1944 98640c13f353a71e2ba14ac65b302f5e 349 Gene3D G3DSA:3.20.20.70 53 345 2.0E-14 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_1944 98640c13f353a71e2ba14ac65b302f5e 349 SUPERFAMILY SSF102114 53 288 4.19E-19 T 15-10-2018 THII_1944 98640c13f353a71e2ba14ac65b302f5e 349 Pfam PF13394 4Fe-4S single cluster domain 61 166 1.4E-6 T 15-10-2018 THII_2149 48daa9a215849a22ba0d58c5abd6fe03 381 SUPERFAMILY SSF53474 12 192 4.0E-7 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_1856 a5a91100e669faf10c52c8366b9271b9 602 Pfam PF13638 PIN domain 96 245 1.9E-5 T 15-10-2018 IPR002716 PIN domain THII_1730 4f72ec60167772b503b40ccbef4bf253 67 Pfam PF14213 STAS-like domain of unknown function (DUF4325) 1 32 5.8E-7 T 15-10-2018 IPR025474 Domain of unknown function DUF4325 THII_0718 8372c41cd33bd69fcb4fddd115bd4afd 272 SUPERFAMILY SSF52540 2 246 8.99E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0718 8372c41cd33bd69fcb4fddd115bd4afd 272 Gene3D G3DSA:3.40.50.300 1 245 2.3E-10 T 15-10-2018 THII_2128 32f3827f0e53f4ba9426047cdd34e7ee 98 SUPERFAMILY SSF47413 32 90 8.8E-11 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 THII_2128 32f3827f0e53f4ba9426047cdd34e7ee 98 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 5 91 7.3E-33 T 15-10-2018 IPR014057 Uncharacterized protein HI1420 THII_2128 32f3827f0e53f4ba9426047cdd34e7ee 98 Gene3D G3DSA:1.10.260.40 33 98 9.4E-6 T 15-10-2018 THII_2128 32f3827f0e53f4ba9426047cdd34e7ee 98 Pfam PF01381 Helix-turn-helix 47 90 1.6E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 THII_2765 098bf8d37a8b908e22ed0024945f64d1 209 SUPERFAMILY SSF54523 6 84 1.96E-5 T 15-10-2018 THII_2765 098bf8d37a8b908e22ed0024945f64d1 209 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 1.5E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_2765 098bf8d37a8b908e22ed0024945f64d1 209 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 23 3.5E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site THII_3739 e624e8bd18a8de03d495174b2f8ff1d3 329 Gene3D G3DSA:3.90.420.10 70 329 1.8E-102 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 THII_3739 e624e8bd18a8de03d495174b2f8ff1d3 329 SUPERFAMILY SSF56524 81 325 3.66E-85 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 THII_3739 e624e8bd18a8de03d495174b2f8ff1d3 329 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 7 329 54.49 T 15-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 THII_3739 e624e8bd18a8de03d495174b2f8ff1d3 329 Pfam PF00174 Oxidoreductase molybdopterin binding domain 113 266 9.5E-28 T 15-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 THII_2938 a25e61d83e4a4da511a1244f78d438a5 156 SUPERFAMILY SSF81573 63 121 1.44E-12 T 15-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily THII_2938 a25e61d83e4a4da511a1244f78d438a5 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.7E-32 T 15-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 THII_2938 a25e61d83e4a4da511a1244f78d438a5 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.523 T 15-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 THII_2938 a25e61d83e4a4da511a1244f78d438a5 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.5E-43 T 15-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 THII_2938 a25e61d83e4a4da511a1244f78d438a5 156 Gene3D G3DSA:1.20.5.620 62 122 7.6E-15 T 15-10-2018 THII_3276 6e23474f37f3446cdc80fb2f3d236295 327 SUPERFAMILY SSF48371 6 280 1.38E-6 T 15-10-2018 IPR016024 Armadillo-type fold THII_0645 75de36989a6d3bb5aa5d0b4791f26ec6 792 SMART SM00912 42 137 6.3E-10 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_0645 75de36989a6d3bb5aa5d0b4791f26ec6 792 Gene3D G3DSA:2.160.20.10 455 681 2.1E-12 T 15-10-2018 IPR012334 Pectin lyase fold THII_0645 75de36989a6d3bb5aa5d0b4791f26ec6 792 Gene3D G3DSA:2.160.20.10 41 384 2.7E-45 T 15-10-2018 IPR012334 Pectin lyase fold THII_0645 75de36989a6d3bb5aa5d0b4791f26ec6 792 SUPERFAMILY SSF51126 324 423 1.1E-7 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0645 75de36989a6d3bb5aa5d0b4791f26ec6 792 Pfam PF05860 haemagglutination activity domain 47 131 1.1E-20 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_0645 75de36989a6d3bb5aa5d0b4791f26ec6 792 SUPERFAMILY SSF51126 43 357 1.04E-32 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0645 75de36989a6d3bb5aa5d0b4791f26ec6 792 SUPERFAMILY SSF51126 523 663 5.65E-6 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_0645 75de36989a6d3bb5aa5d0b4791f26ec6 792 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 54 130 2.4E-19 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal THII_0391 8341cf948b68bbc18e59719154919b77 251 SUPERFAMILY SSF54285 24 77 1.86E-5 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THII_0391 8341cf948b68bbc18e59719154919b77 251 Pfam PF01927 Mut7-C RNAse domain 97 240 8.4E-50 T 15-10-2018 IPR002782 Mut7-C RNAse domain THII_0391 8341cf948b68bbc18e59719154919b77 251 Pfam PF14451 Mut7-C ubiquitin 2 82 3.7E-32 T 15-10-2018 IPR027798 Ubiquitin Mut7-C domain THII_3479 f1a5d19560760de2c68a57e68b0501a9 329 Gene3D G3DSA:3.40.190.10 24 112 8.6E-8 T 15-10-2018 THII_0455 a96d3f4a68cf418a7e3af54906157da6 94 SUPERFAMILY SSF81301 9 68 8.63E-10 T 15-10-2018 THII_0455 a96d3f4a68cf418a7e3af54906157da6 94 Pfam PF01909 Nucleotidyltransferase domain 12 57 3.7E-5 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 THII_0455 a96d3f4a68cf418a7e3af54906157da6 94 Gene3D G3DSA:3.30.460.10 1 94 1.2E-12 T 15-10-2018 THII_0866 f2e1365ed92cf7dda1959c3ac233dac9 317 Pfam PF03773 Predicted permease 22 314 6.1E-64 T 15-10-2018 IPR005524 Predicted permease DUF318 THII_0568 936884a2c7b59679733a6166b157d81a 67 SUPERFAMILY SSF143100 1 50 8.5E-17 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like THII_0568 936884a2c7b59679733a6166b157d81a 67 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 5 49 7.6E-7 T 15-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system THII_0568 936884a2c7b59679733a6166b157d81a 67 Gene3D G3DSA:3.30.160.250 1 65 4.9E-15 T 15-10-2018 THII_0841 2f93e369b25741d545df366f250c225d 168 Gene3D G3DSA:3.40.50.12280 27 168 2.0E-49 T 15-10-2018 THII_0841 2f93e369b25741d545df366f250c225d 168 SUPERFAMILY SSF56770 38 166 1.83E-50 T 15-10-2018 THII_0841 2f93e369b25741d545df366f250c225d 168 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 53 163 5.6E-27 T 15-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_2941 8ff0d2457c29d8077251bb8c4588d4db 134 Pfam PF03899 ATP synthase I chain 18 115 5.0E-10 T 15-10-2018 IPR005598 ATP synthase protein I THII_1589 640025ffdb08778cc7b1387e8c47a43a 111 Pfam PF08263 Leucine rich repeat N-terminal domain 46 81 6.8E-6 T 15-10-2018 IPR013210 Leucine-rich repeat-containing N-terminal, plant-type THII_1589 640025ffdb08778cc7b1387e8c47a43a 111 SUPERFAMILY SSF52058 44 110 2.65E-6 T 15-10-2018 THII_1589 640025ffdb08778cc7b1387e8c47a43a 111 Gene3D G3DSA:3.80.10.10 41 111 7.4E-23 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_2680 4c2ee85c061efd2b00c9de566eba051f 448 PIRSF PIRSF004810 3 448 3.1E-125 T 15-10-2018 IPR014047 Chromate transporter, long chain THII_2680 4c2ee85c061efd2b00c9de566eba051f 448 Pfam PF02417 Chromate transporter 253 441 7.2E-33 T 15-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 THII_2680 4c2ee85c061efd2b00c9de566eba051f 448 Pfam PF02417 Chromate transporter 17 181 1.4E-35 T 15-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 THII_2680 4c2ee85c061efd2b00c9de566eba051f 448 TIGRFAM TIGR00937 2A51: chromate efflux transporter 24 401 7.9E-72 T 15-10-2018 IPR014047 Chromate transporter, long chain THII_2517 3e5224b6bacc03a7bb1af98a34bc1f8c 303 Gene3D G3DSA:1.10.1760.20 1 206 1.2E-47 T 15-10-2018 THII_2517 3e5224b6bacc03a7bb1af98a34bc1f8c 303 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 194 1.5E-41 T 15-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 THII_2517 3e5224b6bacc03a7bb1af98a34bc1f8c 303 Pfam PF13190 PDGLE domain 217 291 6.0E-13 T 15-10-2018 IPR025937 PDGLE domain THII_2517 3e5224b6bacc03a7bb1af98a34bc1f8c 303 ProDom PD486863 PRECURSOR CBIM SIGNAL COBALT MEMBRANE VITAMIN B12 BIOSYNTHESIS COBALAMIN ABC-TYPE 226 290 2.0E-7 T 15-10-2018 THII_1827 f0787c8749051ef23397edc96a3235df 69 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 5 66 1.4E-24 T 15-10-2018 IPR012662 Conserved hypothetical protein CHP02449 THII_3151 7e18e531b6678bc6bbd13acea1ae0f8f 341 Pfam PF00953 Glycosyl transferase family 4 76 229 5.6E-33 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 THII_2873 ae0420003a9b33832a0c7e7a9e46bde0 69 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 42 2.4E-11 T 15-10-2018 IPR022453 Zinc finger, MqsA-type THII_1643 c06b302a2ba2bed10569fe51f1dc0ee4 224 SUPERFAMILY SSF53335 62 221 1.95E-20 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1643 c06b302a2ba2bed10569fe51f1dc0ee4 224 Gene3D G3DSA:3.40.50.150 41 222 1.2E-20 T 15-10-2018 THII_1643 c06b302a2ba2bed10569fe51f1dc0ee4 224 Pfam PF13649 Methyltransferase domain 73 163 2.1E-13 T 15-10-2018 THII_3116 ea97fd20038d3a659e9e3be1ae729bd6 125 Pfam PF01710 Transposase 1 107 4.3E-16 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_3116 ea97fd20038d3a659e9e3be1ae729bd6 125 SUPERFAMILY SSF46689 3 95 9.86E-7 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_0207 fe8a387bab6f5dafb0cf07b6ff09d74c 268 Pfam PF13489 Methyltransferase domain 34 172 1.3E-14 T 15-10-2018 THII_0207 fe8a387bab6f5dafb0cf07b6ff09d74c 268 SUPERFAMILY SSF53335 38 245 3.64E-21 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2315 414953c20b5e5c7d31ba2aad4a9bbfeb 617 Gene3D G3DSA:3.40.50.410 44 213 4.6E-29 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_2315 414953c20b5e5c7d31ba2aad4a9bbfeb 617 SMART SM00327 39 213 1.6E-18 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_2315 414953c20b5e5c7d31ba2aad4a9bbfeb 617 Pfam PF00092 von Willebrand factor type A domain 42 209 1.1E-15 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_2315 414953c20b5e5c7d31ba2aad4a9bbfeb 617 SUPERFAMILY SSF53300 36 211 1.53E-31 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_2808 0a498e890fe10aa64e8a9ef213c44d09 273 Pfam PF06564 Cellulose biosynthesis protein BcsQ 21 141 1.9E-5 T 15-10-2018 IPR017746 Cellulose synthase operon protein BcsQ THII_2808 0a498e890fe10aa64e8a9ef213c44d09 273 SUPERFAMILY SSF47240 47 180 6.49E-5 T 15-10-2018 IPR009078 Ferritin-like superfamily THII_2808 0a498e890fe10aa64e8a9ef213c44d09 273 Pfam PF09968 Uncharacterized protein domain (DUF2202) 46 201 9.5E-34 T 15-10-2018 IPR019243 Domain of unknown function DUF2202 THII_2808 0a498e890fe10aa64e8a9ef213c44d09 273 Gene3D G3DSA:1.20.1260.10 41 208 1.1E-35 T 15-10-2018 IPR012347 Ferritin-like THII_1619 d383e07fecd64d153bd447005ef59682 686 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 464 591 1.5E-34 T 15-10-2018 IPR025299 CstA, C-terminal domain THII_1619 d383e07fecd64d153bd447005ef59682 686 Pfam PF02554 Carbon starvation protein CstA 33 406 8.0E-161 T 15-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 THII_1874 4b3c7802d14d0c6eb229f39ea7aba7ad 333 SUPERFAMILY SSF52922 172 306 1.7E-23 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_1874 4b3c7802d14d0c6eb229f39ea7aba7ad 333 Pfam PF02780 Transketolase, C-terminal domain 178 294 2.7E-17 T 15-10-2018 IPR033248 Transketolase, C-terminal domain THII_1874 4b3c7802d14d0c6eb229f39ea7aba7ad 333 SMART SM00861 2 166 1.4E-30 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain THII_1874 4b3c7802d14d0c6eb229f39ea7aba7ad 333 Gene3D G3DSA:3.40.50.920 176 311 1.6E-28 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 THII_1874 4b3c7802d14d0c6eb229f39ea7aba7ad 333 Pfam PF02779 Transketolase, pyrimidine binding domain 6 165 1.3E-24 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain THII_1874 4b3c7802d14d0c6eb229f39ea7aba7ad 333 Gene3D G3DSA:3.40.50.970 3 171 1.1E-47 T 15-10-2018 THII_1874 4b3c7802d14d0c6eb229f39ea7aba7ad 333 SUPERFAMILY SSF52518 6 166 6.42E-43 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold THII_2486 824d431712bb9b6b70d3040dbb960454 101 Pfam PF03811 InsA N-terminal domain 2 29 4.2E-7 T 15-10-2018 IPR003220 InsA N-terminal domain GO:0006313 THII_2200 e0f396fe5cca33510fb55f40f8c93d88 429 Pfam PF12710 haloacid dehalogenase-like hydrolase 68 258 4.6E-20 T 15-10-2018 THII_2200 e0f396fe5cca33510fb55f40f8c93d88 429 SUPERFAMILY SSF56784 64 260 9.89E-15 T 15-10-2018 IPR036412 HAD-like superfamily THII_2200 e0f396fe5cca33510fb55f40f8c93d88 429 Gene3D G3DSA:3.40.50.1000 122 326 9.8E-32 T 15-10-2018 IPR023214 HAD superfamily THII_0900 3663feb7797dd36c667caa630950897d 133 Gene3D G3DSA:3.30.1050.10 2 131 3.9E-11 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily THII_0900 3663feb7797dd36c667caa630950897d 133 SUPERFAMILY SSF55718 1 132 6.12E-25 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily THII_0826 b6279d45e1d2a09765e8e15a4fef0fd9 72 SUPERFAMILY SSF88723 6 65 6.45E-10 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2861 f224dc63c99785ff204a9b3a79309113 966 Pfam PF13614 AAA domain 144 184 1.5E-9 T 15-10-2018 IPR025669 AAA domain THII_2861 f224dc63c99785ff204a9b3a79309113 966 SUPERFAMILY SSF52540 140 318 2.89E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2861 f224dc63c99785ff204a9b3a79309113 966 Gene3D G3DSA:3.40.50.300 116 368 5.2E-25 T 15-10-2018 THII_3314 ac1296219f17d2b3fd42aba42ab322c5 178 SMART SM00507 81 131 4.8E-14 T 15-10-2018 IPR003615 HNH nuclease THII_3314 ac1296219f17d2b3fd42aba42ab322c5 178 Pfam PF14279 HNH endonuclease 94 144 1.9E-18 T 15-10-2018 IPR029471 HNH endonuclease 5 THII_3314 ac1296219f17d2b3fd42aba42ab322c5 178 Gene3D G3DSA:3.30.40.60 63 160 1.4E-23 T 15-10-2018 THII_0326 1f5204d418668d85bc6eb8b468fcb77b 217 Gene3D G3DSA:3.40.50.1820 6 213 1.4E-16 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_0326 1f5204d418668d85bc6eb8b468fcb77b 217 SUPERFAMILY SSF53474 9 213 2.32E-21 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_0326 1f5204d418668d85bc6eb8b468fcb77b 217 Pfam PF00561 alpha/beta hydrolase fold 41 100 9.1E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_2157 126a394cfc100519a181335f135daabc 166 Pfam PF14345 GDYXXLXY protein 14 149 1.0E-34 T 15-10-2018 IPR025833 GDYXXLXY protein THII_2845 43e43ed91cdc02ecdd53742e75d6f04e 59 Gene3D G3DSA:1.20.1540.10 1 57 1.4E-7 T 15-10-2018 IPR035952 Rhomboid-like superfamily THII_2845 43e43ed91cdc02ecdd53742e75d6f04e 59 SUPERFAMILY SSF144091 9 52 2.09E-9 T 15-10-2018 THII_2845 43e43ed91cdc02ecdd53742e75d6f04e 59 Pfam PF01694 Rhomboid family 10 49 1.5E-8 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 THII_1010 41e52c70ba23c72b3f56fb0d524ff7f3 185 PIRSF PIRSF028301 2 177 9.8E-66 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 THII_1010 41e52c70ba23c72b3f56fb0d524ff7f3 185 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 166 3.6E-60 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 THII_1010 41e52c70ba23c72b3f56fb0d524ff7f3 185 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 163 2.4E-61 T 15-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 THII_2944 ea3339bc8849a29b1820e209f90e21cb 214 SUPERFAMILY SSF53335 40 193 9.25E-12 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2944 ea3339bc8849a29b1820e209f90e21cb 214 Gene3D G3DSA:3.40.50.150 21 210 1.5E-25 T 15-10-2018 THII_2944 ea3339bc8849a29b1820e209f90e21cb 214 Pfam PF13578 Methyltransferase domain 48 172 4.7E-16 T 15-10-2018 THII_1960 898f4944dd8b49690c3c153f137e809b 127 Gene3D G3DSA:2.60.40.1470 2 127 9.0E-49 T 15-10-2018 IPR036767 ApaG domain superfamily THII_1960 898f4944dd8b49690c3c153f137e809b 127 SUPERFAMILY SSF110069 6 127 4.71E-50 T 15-10-2018 IPR036767 ApaG domain superfamily THII_1960 898f4944dd8b49690c3c153f137e809b 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 34.513 T 15-10-2018 IPR023065 Uncharacterised protein family ApaG THII_1960 898f4944dd8b49690c3c153f137e809b 127 Pfam PF04379 ApaG domain 20 103 1.1E-33 T 15-10-2018 IPR007474 ApaG domain THII_1775 7ad1ad9d5631cd8320629635cfad970d 141 Pfam PF08897 Domain of unknown function (DUF1841) 5 136 2.1E-53 T 15-10-2018 IPR014993 Protein of unknown function DUF1841 THII_2020 57d02f3810b300b2769bd7aba528d87a 94 Gene3D G3DSA:3.40.1620.40 32 74 2.6E-5 T 15-10-2018 THII_2020 57d02f3810b300b2769bd7aba528d87a 94 SUPERFAMILY SSF143120 44 81 2.35E-5 T 15-10-2018 IPR036165 YefM-like superfamily THII_3826 36f8eaf709063c241100ca6e717b90b3 146 Pfam PF04186 FxsA cytoplasmic membrane protein 10 111 2.9E-30 T 15-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 THII_2438 d3f1e40b513d90edaef39c1f6d629075 395 Gene3D G3DSA:3.30.1330.60 269 391 6.8E-7 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_2438 d3f1e40b513d90edaef39c1f6d629075 395 Pfam PF00691 OmpA family 293 360 1.8E-5 T 15-10-2018 IPR006665 OmpA-like domain THII_2438 d3f1e40b513d90edaef39c1f6d629075 395 SUPERFAMILY SSF103088 293 389 1.14E-6 T 15-10-2018 IPR036737 OmpA-like domain superfamily THII_2810 b8001d72a19a3584d5a12bdfa317cfa5 149 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 31.31 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 THII_2810 b8001d72a19a3584d5a12bdfa317cfa5 149 SUPERFAMILY SSF69500 1 144 7.06E-50 T 15-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily THII_2810 b8001d72a19a3584d5a12bdfa317cfa5 149 Gene3D G3DSA:3.50.80.10 1 145 1.0E-52 T 15-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily THII_2810 b8001d72a19a3584d5a12bdfa317cfa5 149 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.1E-52 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 THII_2810 b8001d72a19a3584d5a12bdfa317cfa5 149 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 143 1.6E-49 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 THII_3201 f215dee74d81dbb6f8e882f63f16db75 433 Pfam PF10092 Uncharacterized protein conserved in bacteria (DUF2330) 20 353 4.2E-112 T 15-10-2018 IPR019283 Protein of unknown function DUF2330 THII_3201 f215dee74d81dbb6f8e882f63f16db75 433 PIRSF PIRSF026449 2 433 4.6E-167 T 15-10-2018 IPR016838 Uncharacterised conserved protein UCP026449 THII_3032 11ec77a6cc56dd8ab19145a8bcd92464 229 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 164 6.4E-15 T 15-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase THII_3477 ef32aa61ef5a173caa3b073347dd6585 330 Gene3D G3DSA:4.10.1080.10 269 328 4.6E-12 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3477 ef32aa61ef5a173caa3b073347dd6585 330 SUPERFAMILY SSF103647 288 324 4.97E-9 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3477 ef32aa61ef5a173caa3b073347dd6585 330 Pfam PF02412 Thrombospondin type 3 repeat 289 311 5.0E-6 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_1198 a1b422c0d82790d03f4d40365e3b555c 87 Pfam PF04999 Cell division protein FtsL 7 87 6.0E-24 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 THII_1198 a1b422c0d82790d03f4d40365e3b555c 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 15.758 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 THII_1198 a1b422c0d82790d03f4d40365e3b555c 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 5 85 9.0E-23 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 THII_1539 ab28aaf3b3be40715d87079ae605522c 472 Gene3D G3DSA:3.40.50.720 147 271 9.0E-20 T 15-10-2018 THII_1539 ab28aaf3b3be40715d87079ae605522c 472 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 26 472 7.3E-139 T 15-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase THII_1539 ab28aaf3b3be40715d87079ae605522c 472 Pfam PF13727 CoA-binding domain 82 248 3.9E-32 T 15-10-2018 THII_1539 ab28aaf3b3be40715d87079ae605522c 472 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 27 472 3.7E-148 T 15-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 THII_1539 ab28aaf3b3be40715d87079ae605522c 472 Pfam PF02397 Bacterial sugar transferase 285 466 1.5E-65 T 15-10-2018 IPR003362 Bacterial sugar transferase THII_3200 2f9d568bc82e9f136076502d1ebee2f5 268 Pfam PF03116 NQR2, RnfD, RnfE family 130 256 6.5E-12 T 15-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 THII_3954 a5578c70b7aa5da465fce159715c52c6 225 Pfam PF04654 Protein of unknown function, DUF599 18 217 9.2E-66 T 15-10-2018 IPR006747 Protein of unknown function DUF599 THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 SUPERFAMILY SSF49265 895 992 1.0E-4 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 SUPERFAMILY SSF69322 1915 2114 1.96E-8 T 15-10-2018 THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 SUPERFAMILY SSF49265 1019 1096 1.42E-5 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 999 1098 1.2E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 378 485 2.2E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 1812 1911 3.6E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 1713 1811 2.3E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 1392 1493 7.0E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 601 705 2.8E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 1099 1193 5.0E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 1295 1391 1.4E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 899 998 2.0E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 1614 1712 1.2E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 269 377 2.5E-14 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 1194 1294 3.8E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 794 898 4.6E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 1520 1613 1.1E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 Gene3D G3DSA:2.60.40.10 486 600 5.5E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1902 b568a9f0fa5e862616247fea581b5d6c 2141 SUPERFAMILY SSF49265 622 698 1.22E-5 T 15-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 THII_2145 9572c2088b2a3266ab90b0cdd8edc545 348 SUPERFAMILY SSF56219 110 341 5.5E-17 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_2145 9572c2088b2a3266ab90b0cdd8edc545 348 Gene3D G3DSA:3.60.10.10 107 342 2.0E-13 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THII_0081 04110735de3e12a64332bbf756ec6551 124 Pfam PF00535 Glycosyl transferase family 2 4 105 9.7E-22 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0081 04110735de3e12a64332bbf756ec6551 124 Gene3D G3DSA:3.90.550.10 1 115 1.1E-22 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0081 04110735de3e12a64332bbf756ec6551 124 SUPERFAMILY SSF53448 3 107 6.19E-25 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3108 684fe345ddfcfc04323a2ddde7a71f76 504 SUPERFAMILY SSF52151 38 385 1.18E-24 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THII_3108 684fe345ddfcfc04323a2ddde7a71f76 504 Pfam PF01734 Patatin-like phospholipase 65 137 5.8E-9 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 THII_3108 684fe345ddfcfc04323a2ddde7a71f76 504 Gene3D G3DSA:3.40.1090.10 30 263 4.7E-13 T 15-10-2018 THII_1882 990db0789033484737bc3aa3ce9b0a7e 264 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 6 263 1.9E-81 T 15-10-2018 THII_1882 990db0789033484737bc3aa3ce9b0a7e 264 Pfam PF01875 Memo-like protein 7 261 7.1E-58 T 15-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 THII_1882 990db0789033484737bc3aa3ce9b0a7e 264 Hamap MF_00055 MEMO1 family protein . 4 264 48.289 T 15-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 THII_1882 990db0789033484737bc3aa3ce9b0a7e 264 Gene3D G3DSA:3.40.830.10 3 264 3.4E-67 T 15-10-2018 THII_3775 c315e9befb1cf47a09a532efff5eeace 252 SMART SM01057 31 252 2.2E-84 T 15-10-2018 IPR001148 Alpha carbonic anhydrase domain THII_3775 c315e9befb1cf47a09a532efff5eeace 252 SUPERFAMILY SSF51069 30 249 2.5E-69 T 15-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily THII_3775 c315e9befb1cf47a09a532efff5eeace 252 Gene3D G3DSA:3.10.200.10 27 250 3.0E-74 T 15-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily THII_3775 c315e9befb1cf47a09a532efff5eeace 252 Pfam PF00194 Eukaryotic-type carbonic anhydrase 30 251 6.7E-46 T 15-10-2018 IPR001148 Alpha carbonic anhydrase domain THII_3182 96d38688b469b1c3293829ac7fd5d492 418 Gene3D G3DSA:3.10.290.30 284 415 1.5E-20 T 15-10-2018 IPR024047 MM3350-like superfamily THII_3182 96d38688b469b1c3293829ac7fd5d492 418 SUPERFAMILY SSF159941 285 410 3.27E-29 T 15-10-2018 IPR024047 MM3350-like superfamily THII_3182 96d38688b469b1c3293829ac7fd5d492 418 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 293 402 1.7E-20 T 15-10-2018 IPR012912 Plasmid pRiA4b, Orf3 THII_2159 d46e18d5a3eb4f8fc6c0a423a53d0b29 461 Pfam PF04932 O-Antigen ligase 238 349 6.2E-7 T 15-10-2018 IPR007016 O-antigen ligase-related THII_2379 621cf7cc73928301963add5b6f27df57 948 SUPERFAMILY SSF48371 481 867 7.09E-17 T 15-10-2018 IPR016024 Armadillo-type fold THII_2379 621cf7cc73928301963add5b6f27df57 948 Gene3D G3DSA:1.25.10.10 477 789 1.9E-8 T 15-10-2018 IPR011989 Armadillo-like helical THII_0706 94beca64951bc85845d64ccc44ddf6e1 132 SUPERFAMILY SSF110857 1 122 4.32E-28 T 15-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily THII_0706 94beca64951bc85845d64ccc44ddf6e1 132 Gene3D G3DSA:3.10.490.10 1 130 2.1E-25 T 15-10-2018 THII_0706 94beca64951bc85845d64ccc44ddf6e1 132 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 118 2.6E-22 T 15-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like THII_1826 2202fb80a8689c72841ef24a2fbebf8f 295 Pfam PF04333 MlaA lipoprotein 31 229 4.1E-75 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 THII_1826 2202fb80a8689c72841ef24a2fbebf8f 295 PRINTS PR01805 VacJ lipoprotein signature 100 117 1.2E-25 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 THII_1826 2202fb80a8689c72841ef24a2fbebf8f 295 PRINTS PR01805 VacJ lipoprotein signature 136 153 1.2E-25 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 THII_1826 2202fb80a8689c72841ef24a2fbebf8f 295 PRINTS PR01805 VacJ lipoprotein signature 49 65 1.2E-25 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 THII_1826 2202fb80a8689c72841ef24a2fbebf8f 295 PRINTS PR01805 VacJ lipoprotein signature 32 45 1.2E-25 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 THII_3111 f6752666281e6f432019bbf702299048 242 Gene3D G3DSA:1.10.760.10 114 229 2.5E-6 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_3111 f6752666281e6f432019bbf702299048 242 SUPERFAMILY SSF46626 121 229 3.3E-12 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_3111 f6752666281e6f432019bbf702299048 242 SUPERFAMILY SSF46626 3 92 2.4E-13 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1074 d6e240485e1cf4bd586d2af47af87052 162 Pfam PF11848 Domain of unknown function (DUF3368) 114 158 1.1E-16 T 15-10-2018 IPR021799 Protein of unknown function DUF3368 THII_3228 71f9c08881560e8f46333b58ab80c7bf 361 Gene3D G3DSA:2.40.420.20 48 340 1.0E-61 T 15-10-2018 THII_3228 71f9c08881560e8f46333b58ab80c7bf 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 269 6.0E-20 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THII_3228 71f9c08881560e8f46333b58ab80c7bf 361 Gene3D G3DSA:2.40.30.170 51 283 1.0E-61 T 15-10-2018 THII_3228 71f9c08881560e8f46333b58ab80c7bf 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 356 4.3E-73 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 THII_3228 71f9c08881560e8f46333b58ab80c7bf 361 Gene3D G3DSA:1.10.287.470 96 173 1.0E-61 T 15-10-2018 THII_3228 71f9c08881560e8f46333b58ab80c7bf 361 SUPERFAMILY SSF111369 50 276 3.14E-30 T 15-10-2018 THII_3228 71f9c08881560e8f46333b58ab80c7bf 361 Gene3D G3DSA:2.40.50.100 62 208 1.0E-61 T 15-10-2018 THII_3254 4126faebb442bc7fb37c61dadb09171a 229 Pfam PF12644 Protein of unknown function (DUF3782) 71 148 1.5E-24 T 15-10-2018 IPR024271 Protein of unknown function DUF3782 THII_3254 4126faebb442bc7fb37c61dadb09171a 229 Pfam PF07788 PD-(D/E)XK nuclease superfamily 149 218 1.8E-24 T 15-10-2018 IPR012431 PD-(D/E)XK nuclease THII_1560 0f704edeca86d0d3a291824bba50acf4 306 Pfam PF04982 HPP family 46 167 4.0E-40 T 15-10-2018 IPR007065 HPP THII_1098 76eb0209f899eded5c0ef894fed37679 64 SUPERFAMILY SSF52540 6 55 4.93E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1098 76eb0209f899eded5c0ef894fed37679 64 Gene3D G3DSA:3.40.50.300 1 63 6.3E-6 T 15-10-2018 THII_0182 2ab50efd214cc919fa47bc62cb335f01 300 Gene3D G3DSA:3.90.550.10 2 241 7.7E-44 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0182 2ab50efd214cc919fa47bc62cb335f01 300 Pfam PF00535 Glycosyl transferase family 2 9 193 1.6E-22 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0182 2ab50efd214cc919fa47bc62cb335f01 300 SUPERFAMILY SSF53448 6 285 3.13E-50 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0974 08be2fdc39a7fac70eab27fb744dcb58 164 SUPERFAMILY SSF46626 104 160 2.64E-6 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0974 08be2fdc39a7fac70eab27fb744dcb58 164 SUPERFAMILY SSF46626 17 74 8.0E-5 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0974 08be2fdc39a7fac70eab27fb744dcb58 164 Gene3D G3DSA:1.10.760.10 101 160 2.5E-7 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_0974 08be2fdc39a7fac70eab27fb744dcb58 164 Gene3D G3DSA:1.10.760.10 15 74 2.9E-5 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_3124 1c1269ebd974fafb0192d8b144311901 425 PIRSF PIRSF026449 2 425 2.9E-165 T 15-10-2018 IPR016838 Uncharacterised conserved protein UCP026449 THII_3124 1c1269ebd974fafb0192d8b144311901 425 Pfam PF10092 Uncharacterized protein conserved in bacteria (DUF2330) 20 359 9.0E-114 T 15-10-2018 IPR019283 Protein of unknown function DUF2330 THII_2243 6b1c3421ef4a0a8ea0947408d94da61b 105 Pfam PF01710 Transposase 19 104 5.1E-6 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_0498 e29da81763c09ca39be48dfad6a9da8a 142 SUPERFAMILY SSF88723 1 133 3.08E-32 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_0498 e29da81763c09ca39be48dfad6a9da8a 142 Gene3D G3DSA:3.40.50.1010 3 133 7.7E-30 T 15-10-2018 THII_0498 e29da81763c09ca39be48dfad6a9da8a 142 Pfam PF01850 PIN domain 5 122 1.4E-8 T 15-10-2018 IPR002716 PIN domain THII_3046 9e83d022016f6f3f7032622239c1782f 186 SUPERFAMILY SSF52799 46 161 9.66E-22 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like THII_3046 9e83d022016f6f3f7032622239c1782f 186 Pfam PF00782 Dual specificity phosphatase, catalytic domain 50 159 4.4E-9 T 15-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 THII_3046 9e83d022016f6f3f7032622239c1782f 186 Gene3D G3DSA:3.90.190.10 28 185 1.5E-24 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like THII_3046 9e83d022016f6f3f7032622239c1782f 186 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 124 134 - T 15-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 THII_2086 65f81e88d50e138b8da85ae3793defc3 133 Pfam PF04892 VanZ like family 34 112 5.3E-8 T 15-10-2018 IPR006976 VanZ-like THII_2086 65f81e88d50e138b8da85ae3793defc3 133 Pfam PF10990 Protein of unknown function (DUF2809) 19 103 7.5E-30 T 15-10-2018 IPR021257 Protein of unknown function DUF2809 THII_3304 b57630bffaf56b9d99104fc9fbfc5f48 401 Pfam PF04230 Polysaccharide pyruvyl transferase 13 326 1.9E-41 T 15-10-2018 IPR007345 Polysaccharide pyruvyl transferase THII_0847 4effc31d86edeed3a2b6dc5a6821cd0a 200 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 189 35.198 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 THII_0847 4effc31d86edeed3a2b6dc5a6821cd0a 200 PIRSF PIRSF001296 1 193 2.7E-73 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 THII_0847 4effc31d86edeed3a2b6dc5a6821cd0a 200 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 5 189 1.3E-73 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 THII_0847 4effc31d86edeed3a2b6dc5a6821cd0a 200 Pfam PF02669 K+-transporting ATPase, c chain 6 188 3.7E-72 T 15-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 THII_3142 dc691c28828b8692212ad901d6bcbb48 520 Pfam PF04932 O-Antigen ligase 299 439 4.3E-16 T 15-10-2018 IPR007016 O-antigen ligase-related THII_3579 af6a98a023d2a534aeacac0a3ae3526e 143 Pfam PF01724 Domain of unknown function DUF29 19 109 1.4E-8 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_3884 a562bd5ebc8fa8210f6902524b0cf285 239 SUPERFAMILY SSF52980 28 156 4.56E-11 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3884 a562bd5ebc8fa8210f6902524b0cf285 239 Pfam PF05685 Putative restriction endonuclease 30 172 6.2E-21 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3884 a562bd5ebc8fa8210f6902524b0cf285 239 Gene3D G3DSA:3.90.1570.10 27 142 1.6E-6 T 15-10-2018 THII_3067 8f52bd78f2f7a28650c20e525ed737ee 574 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 562 1.4E-5 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase THII_3067 8f52bd78f2f7a28650c20e525ed737ee 574 SUPERFAMILY SSF55874 446 570 3.27E-12 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3067 8f52bd78f2f7a28650c20e525ed737ee 574 Gene3D G3DSA:3.30.565.10 431 558 7.0E-13 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THII_3067 8f52bd78f2f7a28650c20e525ed737ee 574 Gene3D G3DSA:1.10.287.130 374 430 7.0E-13 T 15-10-2018 THII_2990 ae0be2f7b7c6fc4f0b02b83b7ca9d21a 234 Gene3D G3DSA:3.10.580.10 75 233 3.8E-6 T 15-10-2018 THII_2990 ae0be2f7b7c6fc4f0b02b83b7ca9d21a 234 SUPERFAMILY SSF54631 85 211 1.18E-5 T 15-10-2018 THII_0815 ae27453b90a11ea32b9fb6013614f995 256 Gene3D G3DSA:1.10.150.690 37 126 9.0E-26 T 15-10-2018 THII_0815 ae27453b90a11ea32b9fb6013614f995 256 Pfam PF09836 Putative DNA-binding domain 13 97 1.3E-25 T 15-10-2018 IPR018640 Putative DNA-binding domain, bacteria THII_2837 e7650d42f7c79eb2f4cb0c32a96a2dd8 205 SUPERFAMILY SSF103039 6 199 6.15E-41 T 15-10-2018 IPR028976 CheC-like superfamily THII_2837 e7650d42f7c79eb2f4cb0c32a96a2dd8 205 Gene3D G3DSA:3.40.1550.10 4 199 1.8E-47 T 15-10-2018 IPR028976 CheC-like superfamily THII_2242 5fed9dffd29279b71b470bade1f79165 121 Pfam PF13358 DDE superfamily endonuclease 2 74 9.7E-10 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_2191 1938b81efd10071a39fcd746f1beda6b 94 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 10 90 1.0E-8 T 15-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system THII_3084 4301f6cf11024d9defbf2f436b4bc10f 71 SUPERFAMILY SSF143100 1 65 9.55E-19 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like THII_3084 4301f6cf11024d9defbf2f436b4bc10f 71 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 65 2.2E-12 T 15-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system THII_3084 4301f6cf11024d9defbf2f436b4bc10f 71 Gene3D G3DSA:3.30.160.250 1 69 4.8E-18 T 15-10-2018 THII_1113 2f5d62fecba1433be2a2c2acd35418b9 198 SUPERFAMILY SSF50630 92 174 1.28E-9 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily THII_1113 2f5d62fecba1433be2a2c2acd35418b9 198 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 97 108 - T 15-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 THII_1113 2f5d62fecba1433be2a2c2acd35418b9 198 Pfam PF13650 Aspartyl protease 93 173 6.7E-9 T 15-10-2018 THII_1113 2f5d62fecba1433be2a2c2acd35418b9 198 Gene3D G3DSA:2.40.70.10 83 198 1.8E-8 T 15-10-2018 IPR021109 Aspartic peptidase domain superfamily THII_0987 109127d96940a7df07307078d270d125 240 SUPERFAMILY SSF52980 10 153 1.23E-17 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0987 109127d96940a7df07307078d270d125 240 Gene3D G3DSA:3.90.1570.10 18 138 4.4E-7 T 15-10-2018 THII_0987 109127d96940a7df07307078d270d125 240 Pfam PF05685 Putative restriction endonuclease 12 167 1.4E-23 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3505 9c9f37a9595c73932ea1c69b44d20e15 105 Gene3D G3DSA:1.25.40.10 2 104 3.9E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_3505 9c9f37a9595c73932ea1c69b44d20e15 105 SUPERFAMILY SSF48452 15 100 3.25E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0526 186a8490afbd8cddacb11eae4eb957f7 160 Pfam PF05685 Putative restriction endonuclease 15 148 2.2E-14 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0526 186a8490afbd8cddacb11eae4eb957f7 160 SUPERFAMILY SSF52980 17 147 2.63E-20 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0526 186a8490afbd8cddacb11eae4eb957f7 160 Gene3D G3DSA:3.90.1570.10 4 153 6.4E-16 T 15-10-2018 THII_0660 0370f0fe8cf5a4ccd9086d0fd43a8d4d 345 SUPERFAMILY SSF52540 5 336 8.38E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0660 0370f0fe8cf5a4ccd9086d0fd43a8d4d 345 Pfam PF00437 Type II/IV secretion system protein 12 265 1.2E-43 T 15-10-2018 IPR001482 Type II/IV secretion system protein THII_0660 0370f0fe8cf5a4ccd9086d0fd43a8d4d 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 7.0E-145 T 15-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 THII_0660 0370f0fe8cf5a4ccd9086d0fd43a8d4d 345 Gene3D G3DSA:3.30.450.90 1 100 1.9E-32 T 15-10-2018 THII_0660 0370f0fe8cf5a4ccd9086d0fd43a8d4d 345 Gene3D G3DSA:3.40.50.300 101 345 2.8E-99 T 15-10-2018 THII_2166 219c160ddcca5350e07b0e57d4485422 198 Gene3D G3DSA:3.40.50.360 2 196 1.7E-63 T 15-10-2018 IPR029039 Flavoprotein-like superfamily THII_2166 219c160ddcca5350e07b0e57d4485422 198 SUPERFAMILY SSF52218 1 195 4.06E-62 T 15-10-2018 IPR029039 Flavoprotein-like superfamily THII_2166 219c160ddcca5350e07b0e57d4485422 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 194 6.4E-48 T 15-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 THII_2143 3d97d3dfeb789ae92a39f9d37718bc9f 144 SUPERFAMILY SSF88723 2 126 3.6E-13 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2143 3d97d3dfeb789ae92a39f9d37718bc9f 144 Pfam PF01850 PIN domain 41 121 3.6E-8 T 15-10-2018 IPR002716 PIN domain THII_3777 ec7bd7ed881d45481256620fa5cad7f6 117 SUPERFAMILY SSF101386 4 112 3.49E-35 T 15-10-2018 THII_3777 ec7bd7ed881d45481256620fa5cad7f6 117 PIRSF PIRSF029826 1 117 3.6E-43 T 15-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 THII_3777 ec7bd7ed881d45481256620fa5cad7f6 117 Gene3D G3DSA:1.10.287.1080 1 109 4.1E-35 T 15-10-2018 THII_3777 ec7bd7ed881d45481256620fa5cad7f6 117 Pfam PF12643 MazG-like family 38 109 2.8E-10 T 15-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 THII_3642 4a8e0d06cf472f9ab03251e67d0f070a 298 Gene3D G3DSA:3.40.630.10 10 297 2.3E-60 T 15-10-2018 THII_3642 4a8e0d06cf472f9ab03251e67d0f070a 298 Pfam PF04389 Peptidase family M28 73 287 1.6E-31 T 15-10-2018 IPR007484 Peptidase M28 THII_3642 4a8e0d06cf472f9ab03251e67d0f070a 298 SUPERFAMILY SSF53187 23 290 2.6E-54 T 15-10-2018 THII_0171 5bd1a71479ca9a53cb7d4fb8c234ff86 145 Gene3D G3DSA:1.20.1220.20 2 145 1.8E-32 T 15-10-2018 THII_0171 5bd1a71479ca9a53cb7d4fb8c234ff86 145 Pfam PF01724 Domain of unknown function DUF29 7 142 1.3E-51 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0524 ee1849bb6e9351b9cc23030171e92bb4 83 Gene3D G3DSA:3.40.1620.40 2 67 4.4E-13 T 15-10-2018 THII_0524 ee1849bb6e9351b9cc23030171e92bb4 83 SUPERFAMILY SSF143120 1 76 4.71E-13 T 15-10-2018 IPR036165 YefM-like superfamily THII_0524 ee1849bb6e9351b9cc23030171e92bb4 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 68 2.4E-6 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM THII_2671 50421f9d4ab4b869ccf0b9b7cb099ad4 161 Gene3D G3DSA:1.20.1220.20 7 161 1.9E-26 T 15-10-2018 THII_2671 50421f9d4ab4b869ccf0b9b7cb099ad4 161 Pfam PF01724 Domain of unknown function DUF29 13 157 1.0E-47 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0239 f6f2d20e971c49ba8b57d0e3bb2b0843 285 Gene3D G3DSA:1.10.620.20 18 242 1.1E-23 T 15-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 THII_0239 f6f2d20e971c49ba8b57d0e3bb2b0843 285 SUPERFAMILY SSF47240 41 203 5.03E-17 T 15-10-2018 IPR009078 Ferritin-like superfamily THII_2503 ff7cb37d812072e1d9134aa0fe12337d 201 Pfam PF12697 Alpha/beta hydrolase family 31 131 1.1E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_2503 ff7cb37d812072e1d9134aa0fe12337d 201 Gene3D G3DSA:3.40.50.1820 2 200 6.2E-48 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_2503 ff7cb37d812072e1d9134aa0fe12337d 201 SUPERFAMILY SSF53474 4 198 1.97E-42 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_2503 ff7cb37d812072e1d9134aa0fe12337d 201 Pfam PF00561 alpha/beta hydrolase fold 137 181 4.4E-6 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 THII_1400 07e815141844af8eed9f9001a0baa348 590 Pfam PF13464 Domain of unknown function (DUF4115) 511 579 1.7E-10 T 15-10-2018 IPR025194 Domain of unknown function DUF4115 THII_1400 07e815141844af8eed9f9001a0baa348 590 Pfam PF13413 Helix-turn-helix domain 308 368 2.3E-20 T 15-10-2018 THII_1400 07e815141844af8eed9f9001a0baa348 590 Gene3D G3DSA:1.10.260.40 295 399 1.8E-22 T 15-10-2018 THII_0025 0578ab2a5cef24472a2eadfc441490e0 338 Gene3D G3DSA:1.20.1630.10 3 300 4.8E-6 T 15-10-2018 THII_0025 0578ab2a5cef24472a2eadfc441490e0 338 Pfam PF03916 Polysulphide reductase, NrfD 9 311 4.9E-27 T 15-10-2018 IPR005614 NrfD family THII_1751 bd586c666648453eb7144a5f78a02af4 145 Pfam PF02391 MoaE protein 19 123 1.6E-29 T 15-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 THII_1751 bd586c666648453eb7144a5f78a02af4 145 Gene3D G3DSA:3.90.1170.40 2 144 3.6E-42 T 15-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 THII_1751 bd586c666648453eb7144a5f78a02af4 145 SUPERFAMILY SSF54690 25 142 9.68E-43 T 15-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 THII_3729 7e807ee60997ebc8bc71ab0760edb5d3 96 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 85 2.2E-28 T 15-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system THII_3729 7e807ee60997ebc8bc71ab0760edb5d3 96 SUPERFAMILY SSF143100 1 65 8.89E-22 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like THII_3729 7e807ee60997ebc8bc71ab0760edb5d3 96 Gene3D G3DSA:3.30.160.250 1 84 3.7E-26 T 15-10-2018 THII_0478 1839b2cbbf0132b3e66668ec02f9c535 486 SUPERFAMILY SSF53335 7 210 1.18E-14 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0478 1839b2cbbf0132b3e66668ec02f9c535 486 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 14 30 2.9E-5 T 15-10-2018 THII_0478 1839b2cbbf0132b3e66668ec02f9c535 486 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 40 54 2.9E-5 T 15-10-2018 THII_0478 1839b2cbbf0132b3e66668ec02f9c535 486 Gene3D G3DSA:3.40.50.150 17 225 1.5E-13 T 15-10-2018 THII_1998 4e01aa23a2c62d4f04cee7fb406db4a8 865 Pfam PF09684 Phage tail protein (Tail_P2_I) 227 317 2.5E-5 T 15-10-2018 IPR006521 Tail protein I THII_2930 e6fd4ef3f80a6140438a3ad49f93bae7 200 SUPERFAMILY SSF54518 9 90 3.66E-5 T 15-10-2018 IPR025659 Tubby-like, C-terminal THII_1831 4ee83d4a437a434b43d3cb2e59e58e32 94 Pfam PF01797 Transposase IS200 like 2 83 2.2E-25 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_1831 4ee83d4a437a434b43d3cb2e59e58e32 94 Gene3D G3DSA:3.30.70.1290 1 90 5.1E-29 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_1831 4ee83d4a437a434b43d3cb2e59e58e32 94 SMART SM01321 1 83 6.3E-11 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 THII_1831 4ee83d4a437a434b43d3cb2e59e58e32 94 SUPERFAMILY SSF143422 2 84 4.84E-28 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 THII_0730 cfda31216691919ed7ce2d996927d69f 479 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 24 182 1.3E-7 T 15-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like THII_1604 4d1696cfd32c51052124305b88f1e9c3 305 Gene3D G3DSA:1.20.120.350 120 253 1.2E-6 T 15-10-2018 IPR027359 Voltage-dependent channel domain superfamily THII_0389 43ff46f986b0508e47a020e15f5e9d73 346 SUPERFAMILY SSF56281 1 323 9.96E-19 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_0389 43ff46f986b0508e47a020e15f5e9d73 346 Pfam PF00753 Metallo-beta-lactamase superfamily 84 156 7.4E-9 T 15-10-2018 IPR001279 Metallo-beta-lactamase THII_3626 75a1e000d3befb3a7d70aab113751ef3 49 Pfam PF11295 Protein of unknown function (DUF3096) 9 44 8.0E-17 T 15-10-2018 IPR021446 Protein of unknown function DUF3096 THII_1587 de75a8ff32db842e482146d441cc33b9 365 Pfam PF13665 Domain of unknown function (DUF4150) 21 133 2.3E-35 T 15-10-2018 IPR025425 Domain of unknown function DUF4150 THII_1587 de75a8ff32db842e482146d441cc33b9 365 Pfam PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 210 310 2.7E-19 T 15-10-2018 IPR028917 Tox-GHH2 domain THII_1868 ec6991ad5f89fa9dc3ea00bad54a5c67 456 Pfam PF13598 Domain of unknown function (DUF4139) 115 394 2.3E-9 T 15-10-2018 IPR037291 Domain of unknown function DUF4139 THII_0424 9aa2bd6f7dc335105be9d2d96c47de43 705 SUPERFAMILY SSF88713 136 555 3.34E-29 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 THII_0424 9aa2bd6f7dc335105be9d2d96c47de43 705 Pfam PF03065 Glycosyl hydrolase family 57 227 318 2.3E-12 T 15-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 THII_2156 5c6c038b5a77da47fa571fb196ac716d 356 Pfam PF14351 Domain of unknown function (DUF4401) 42 351 1.2E-48 T 15-10-2018 IPR025513 Domain of unknown function DUF4401 THII_3808 b8fc08738f9ec6ba4e70aaa386d979cb 105 Gene3D G3DSA:2.60.300.12 1 103 8.4E-38 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 THII_3808 b8fc08738f9ec6ba4e70aaa386d979cb 105 SUPERFAMILY SSF89360 1 95 8.63E-13 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 THII_1547 271b0065c5fa09e4844a11349b574cef 847 Gene3D G3DSA:3.40.50.2000 26 501 1.6E-214 T 15-10-2018 THII_1547 271b0065c5fa09e4844a11349b574cef 847 Pfam PF00343 Carbohydrate phosphorylase 127 841 0.0 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 THII_1547 271b0065c5fa09e4844a11349b574cef 847 PIRSF PIRSF000460 25 846 3.7E-238 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 THII_1547 271b0065c5fa09e4844a11349b574cef 847 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 685 697 - T 15-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 THII_1547 271b0065c5fa09e4844a11349b574cef 847 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 39 841 0.0 T 15-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 THII_1547 271b0065c5fa09e4844a11349b574cef 847 Gene3D G3DSA:3.40.50.2000 502 826 2.0E-151 T 15-10-2018 THII_1547 271b0065c5fa09e4844a11349b574cef 847 SUPERFAMILY SSF53756 33 844 0.0 T 15-10-2018 THII_0904 53c71514d9a1e2e56a6239ef19aada2c 497 Gene3D G3DSA:1.20.1270.180 221 330 1.1E-7 T 15-10-2018 THII_0904 53c71514d9a1e2e56a6239ef19aada2c 497 Pfam PF07007 Lysozyme inhibitor LprI 230 321 3.8E-15 T 15-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal THII_2281 4bd5031fc6df7b5f2b907db39bebae3f 222 Gene3D G3DSA:2.60.40.10 101 218 6.6E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0361 1dcb73cc1b8d5779855b98ea85065c14 91 Pfam PF04977 Septum formation initiator 15 91 3.4E-25 T 15-10-2018 IPR007060 Septum formation initiator FtsL/DivIC THII_0361 1dcb73cc1b8d5779855b98ea85065c14 91 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 91 28.427 T 15-10-2018 IPR023081 Cell division protein FtsB THII_2197 e2bdbfa1e106924b204e8de06d500500 111 Pfam PF13358 DDE superfamily endonuclease 2 74 7.4E-10 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_1867 b609839a992ddf33f65534815d70cd33 613 Pfam PF13432 Tetratricopeptide repeat 536 598 1.1E-9 T 15-10-2018 THII_1867 b609839a992ddf33f65534815d70cd33 613 SUPERFAMILY SSF48452 446 601 5.93E-25 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1867 b609839a992ddf33f65534815d70cd33 613 SMART SM00028 492 525 38.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1867 b609839a992ddf33f65534815d70cd33 613 SMART SM00028 449 482 450.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1867 b609839a992ddf33f65534815d70cd33 613 SMART SM00028 531 564 2.6E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1867 b609839a992ddf33f65534815d70cd33 613 SMART SM00028 565 598 1.7E-5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 THII_1867 b609839a992ddf33f65534815d70cd33 613 Gene3D G3DSA:1.25.40.10 414 612 8.0E-33 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_2595 f510d0b304a5ddfc40cbaf60e8d1571a 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 148 3.8E-65 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_2595 f510d0b304a5ddfc40cbaf60e8d1571a 319 SUPERFAMILY SSF52096 5 316 6.18E-101 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily THII_2595 f510d0b304a5ddfc40cbaf60e8d1571a 319 Gene3D G3DSA:3.90.226.10 1 318 5.6E-121 T 15-10-2018 THII_2595 f510d0b304a5ddfc40cbaf60e8d1571a 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 1 316 1.4E-154 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_2595 f510d0b304a5ddfc40cbaf60e8d1571a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 3.9E-47 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_2595 f510d0b304a5ddfc40cbaf60e8d1571a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 3.9E-47 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_2595 f510d0b304a5ddfc40cbaf60e8d1571a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 3.9E-47 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_2595 f510d0b304a5ddfc40cbaf60e8d1571a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 3.9E-47 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_2595 f510d0b304a5ddfc40cbaf60e8d1571a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 3.9E-47 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_2595 f510d0b304a5ddfc40cbaf60e8d1571a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 3.9E-47 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_2595 f510d0b304a5ddfc40cbaf60e8d1571a 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.561 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 THII_3757 e981a1804854cff2a7f7a86d46020c62 140 Gene3D G3DSA:2.40.160.10 43 123 3.0E-6 T 15-10-2018 IPR023614 Porin domain superfamily THII_3950 6877466716dbda0d9bfe3841971af692 225 Pfam PF04012 PspA/IM30 family 3 218 2.4E-51 T 15-10-2018 IPR007157 PspA/IM30 THII_0057 d649dfc99e3806bac7e3c5d72eface18 191 Pfam PF02325 YGGT family 15 83 2.3E-13 T 15-10-2018 IPR003425 CCB3/YggT GO:0016020 THII_0057 d649dfc99e3806bac7e3c5d72eface18 191 Pfam PF02325 YGGT family 111 180 5.7E-18 T 15-10-2018 IPR003425 CCB3/YggT GO:0016020 THII_2401 54d7d7f7a5b5cd1e17cdf1f935e711e1 136 Pfam PF13518 Helix-turn-helix domain 47 77 5.9E-6 T 15-10-2018 THII_1866 074675878cb71867b7bb63aa64ecbf99 272 Pfam PF01061 ABC-2 type transporter 31 223 9.1E-8 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 THII_2895 d3ce411f756f231d39ec62b3948aaede 1914 Gene3D G3DSA:2.60.40.10 919 1028 2.0E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2895 d3ce411f756f231d39ec62b3948aaede 1914 Gene3D G3DSA:2.60.40.10 691 795 1.3E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2895 d3ce411f756f231d39ec62b3948aaede 1914 Gene3D G3DSA:2.60.40.10 468 573 7.3E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2895 d3ce411f756f231d39ec62b3948aaede 1914 SUPERFAMILY SSF89372 291 443 6.67E-7 T 15-10-2018 THII_2895 d3ce411f756f231d39ec62b3948aaede 1914 SMART SM00706 113 151 15.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_2895 d3ce411f756f231d39ec62b3948aaede 1914 SMART SM00706 311 349 62.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_2895 d3ce411f756f231d39ec62b3948aaede 1914 SMART SM00706 272 310 66.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_2895 d3ce411f756f231d39ec62b3948aaede 1914 SMART SM00706 350 388 130.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_2895 d3ce411f756f231d39ec62b3948aaede 1914 SMART SM00706 35 73 24.0 T 15-10-2018 IPR006624 Beta-propeller repeat TECPR THII_3914 11db0da22303965457bed49ef32c04cd 146 SUPERFAMILY SSF47175 33 145 7.65E-9 T 15-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 THII_0135 d78e434dd0db1ed577104b00c4cab29d 197 Gene3D G3DSA:1.20.120.450 35 191 3.3E-17 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes THII_0135 d78e434dd0db1ed577104b00c4cab29d 197 SUPERFAMILY SSF109854 35 193 1.24E-8 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes THII_0170 34698cd4df0c068747f931209beca417 284 Pfam PF12784 PD-(D/E)XK nuclease family transposase 7 229 3.5E-55 T 15-10-2018 THII_0170 34698cd4df0c068747f931209beca417 284 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 7 281 3.3E-56 T 15-10-2018 IPR010106 Recombination-promoting nuclease RpnA THII_2062 cea94d4119480e0d941c2897303ae844 120 Pfam PF03259 Roadblock/LC7 domain 16 96 1.2E-14 T 15-10-2018 IPR004942 Roadblock/LAMTOR2 domain THII_2062 cea94d4119480e0d941c2897303ae844 120 SUPERFAMILY SSF103196 4 120 3.14E-28 T 15-10-2018 THII_2062 cea94d4119480e0d941c2897303ae844 120 Gene3D G3DSA:3.30.450.30 2 120 2.1E-30 T 15-10-2018 THII_2062 cea94d4119480e0d941c2897303ae844 120 SMART SM00960 6 96 8.7E-22 T 15-10-2018 IPR004942 Roadblock/LAMTOR2 domain THII_1803 4341b00905c526cf94ddc40680fc83ba 158 Gene3D G3DSA:1.20.1220.20 2 158 3.4E-25 T 15-10-2018 THII_1803 4341b00905c526cf94ddc40680fc83ba 158 Pfam PF01724 Domain of unknown function DUF29 8 153 1.5E-46 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_1052 d8ca10453eff431cb17b0c915c1886c2 278 SUPERFAMILY SSF53300 14 241 1.88E-12 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_1142 7f13418d390c914ba268445e7cd2171c 242 Pfam PF13489 Methyltransferase domain 27 171 2.8E-13 T 15-10-2018 THII_1142 7f13418d390c914ba268445e7cd2171c 242 Gene3D G3DSA:3.40.50.150 6 179 3.7E-29 T 15-10-2018 THII_1142 7f13418d390c914ba268445e7cd2171c 242 SUPERFAMILY SSF53335 16 240 2.89E-33 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1955 f5d1490cd19a98a8713e1ceb5ce5d217 286 Gene3D G3DSA:2.60.40.10 179 285 4.9E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0673 9830771ccc534a1df07f0a4166f43831 402 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 81 341 1.7E-16 T 15-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT THII_0673 9830771ccc534a1df07f0a4166f43831 402 PIRSF PIRSF500217 1 402 6.7E-76 T 15-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 THII_0673 9830771ccc534a1df07f0a4166f43831 402 PIRSF PIRSF016636 1 402 2.2E-75 T 15-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB THII_0566 9eca0b8147ff2a9b3d9b9c4f672a9af0 101 Pfam PF09827 CRISPR associated protein Cas2 7 79 2.5E-20 T 15-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 THII_0566 9eca0b8147ff2a9b3d9b9c4f672a9af0 101 SUPERFAMILY SSF143430 7 85 6.41E-21 T 15-10-2018 THII_0566 9eca0b8147ff2a9b3d9b9c4f672a9af0 101 Gene3D G3DSA:3.30.70.240 4 72 1.8E-22 T 15-10-2018 THII_0566 9eca0b8147ff2a9b3d9b9c4f672a9af0 101 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 7 87 1.3E-14 T 15-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 THII_0566 9eca0b8147ff2a9b3d9b9c4f672a9af0 101 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 6 92 16.659 T 15-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 THII_0614 fdfadb1484029e386a310a4548643bc2 125 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 10 125 1.3E-40 T 15-10-2018 IPR017462 Sulphur relay, TusC/DsrF THII_0614 fdfadb1484029e386a310a4548643bc2 125 SUPERFAMILY SSF75169 8 125 2.36E-39 T 15-10-2018 IPR027396 DsrEFH-like THII_0614 fdfadb1484029e386a310a4548643bc2 125 Pfam PF02635 DsrE/DsrF-like family 9 125 1.1E-27 T 15-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein THII_0614 fdfadb1484029e386a310a4548643bc2 125 Gene3D G3DSA:3.40.1260.10 4 125 6.3E-42 T 15-10-2018 IPR027396 DsrEFH-like THII_1762 9c405598cef60dc9d0c99d0e7c816035 96 Gene3D G3DSA:3.30.1450.10 27 96 8.6E-7 T 15-10-2018 IPR037873 BamE-like THII_1762 9c405598cef60dc9d0c99d0e7c816035 96 Pfam PF12978 Domain of Unknown Function with PDB structure (DUF3862) 28 90 1.0E-5 T 15-10-2018 IPR024418 Protein of unknown function DUF3862 THII_1505 48b995169ec884dabb9e75bf0546fbf9 524 Gene3D G3DSA:2.130.10.10 132 230 8.9E-10 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1505 48b995169ec884dabb9e75bf0546fbf9 524 Gene3D G3DSA:2.130.10.10 231 338 4.3E-14 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1505 48b995169ec884dabb9e75bf0546fbf9 524 Gene3D G3DSA:2.130.10.10 23 131 9.1E-12 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1505 48b995169ec884dabb9e75bf0546fbf9 524 SUPERFAMILY SSF82171 53 490 6.67E-34 T 15-10-2018 THII_1505 48b995169ec884dabb9e75bf0546fbf9 524 Gene3D G3DSA:2.130.10.10 339 446 1.2E-15 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1505 48b995169ec884dabb9e75bf0546fbf9 524 Gene3D G3DSA:2.130.10.10 447 523 7.4E-8 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 THII_1505 48b995169ec884dabb9e75bf0546fbf9 524 Pfam PF10282 Lactonase, 7-bladed beta-propeller 244 440 5.7E-23 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_1505 48b995169ec884dabb9e75bf0546fbf9 524 Pfam PF10282 Lactonase, 7-bladed beta-propeller 38 132 2.1E-10 T 15-10-2018 IPR019405 Lactonase, 7-bladed beta propeller THII_0318 1bc2b8cb44711d8d90b1cfdae9ca2005 618 Pfam PF14015 Protein of unknown function (DUF4231) 303 404 1.3E-10 T 15-10-2018 IPR025325 Protein of unknown function DUF4231 THII_2394 18d53bf8a3f078650e6afec4d1a8f489 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 6 60 2.7E-22 T 15-10-2018 IPR019201 Protein of unknown function DUF2065 THII_2195 66b7ac86215459ba10715724aaeae21e 141 SUPERFAMILY SSF53098 16 91 1.29E-9 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_1942 e25104688c97ecc5b5d8079cc94d4fb7 143 SUPERFAMILY SSF88723 2 139 5.33E-29 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_1942 e25104688c97ecc5b5d8079cc94d4fb7 143 Gene3D G3DSA:3.40.50.1010 2 136 3.6E-32 T 15-10-2018 THII_1942 e25104688c97ecc5b5d8079cc94d4fb7 143 Pfam PF01850 PIN domain 5 126 2.3E-12 T 15-10-2018 IPR002716 PIN domain THII_1931 b193542839f4cfc96325e0896749b181 399 Gene3D G3DSA:3.40.50.1110 109 197 1.7E-8 T 15-10-2018 IPR036514 SGNH hydrolase superfamily THII_1931 b193542839f4cfc96325e0896749b181 399 SUPERFAMILY SSF52266 111 396 3.81E-20 T 15-10-2018 THII_1931 b193542839f4cfc96325e0896749b181 399 Gene3D G3DSA:3.40.50.1110 277 392 3.0E-5 T 15-10-2018 IPR036514 SGNH hydrolase superfamily THII_1931 b193542839f4cfc96325e0896749b181 399 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 115 382 4.5E-8 T 15-10-2018 IPR013830 SGNH hydrolase-type esterase domain THII_2276 a5f22da8e2cfdb68a178e9afcdba9fab 346 Pfam PF04754 Putative transposase, YhgA-like 3 204 2.2E-36 T 15-10-2018 IPR006842 Transposase (putative), YhgA-like THII_2348 3f61055e4962762a1c122c83520414be 151 SUPERFAMILY SSF54631 1 143 3.28E-36 T 15-10-2018 THII_2348 3f61055e4962762a1c122c83520414be 151 Pfam PF00571 CBS domain 89 143 3.0E-14 T 15-10-2018 IPR000644 CBS domain THII_2348 3f61055e4962762a1c122c83520414be 151 Pfam PF00571 CBS domain 3 57 3.9E-12 T 15-10-2018 IPR000644 CBS domain THII_2348 3f61055e4962762a1c122c83520414be 151 SMART SM00116 96 144 3.5E-9 T 15-10-2018 IPR000644 CBS domain THII_2348 3f61055e4962762a1c122c83520414be 151 SMART SM00116 10 58 5.9E-9 T 15-10-2018 IPR000644 CBS domain THII_2348 3f61055e4962762a1c122c83520414be 151 Gene3D G3DSA:3.10.580.10 1 147 2.1E-36 T 15-10-2018 THII_1729 cd7021346da527c7847771772b9364ce 665 Gene3D G3DSA:2.60.40.10 62 161 7.2E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0356 1b9b04224b800e6946426f9a60986727 221 Pfam PF07290 Protein of unknown function (DUF1449) 10 213 1.3E-61 T 15-10-2018 IPR010840 Protein of unknown function DUF1449 THII_0831 06a1fff36b624b778922d3210eed5c6c 227 TIGRFAM TIGR02807 cas6_cmx6: CRISPR-associated protein Cas6, subtype MYXAN 18 215 7.7E-40 T 15-10-2018 IPR014174 CRISPR-associated protein, Cas6-related THII_0831 06a1fff36b624b778922d3210eed5c6c 227 Pfam PF09559 Cas6 Crispr 19 217 2.8E-64 T 15-10-2018 IPR014174 CRISPR-associated protein, Cas6-related THII_1699 3430b946e875667bf8c21626e1e2226f 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 332 2.4E-57 T 15-10-2018 IPR016040 NAD(P)-binding domain THII_1699 3430b946e875667bf8c21626e1e2226f 340 Gene3D G3DSA:3.40.50.720 2 339 4.2E-97 T 15-10-2018 THII_1699 3430b946e875667bf8c21626e1e2226f 340 SUPERFAMILY SSF51735 1 336 9.16E-82 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0821 bab45482ec0a83258b78af85a4cd7c39 1827 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1475 1826 5.8E-55 T 15-10-2018 IPR007452 Translocation and assembly module TamB THII_3260 7404374415687b68687f566979caa297 277 SUPERFAMILY SSF48695 35 228 4.09E-16 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily THII_3260 7404374415687b68687f566979caa297 277 Gene3D G3DSA:3.90.10.10 96 228 1.2E-5 T 15-10-2018 THII_2856 4fdeee7325f51ac88a7c5f048d2290df 249 Pfam PF13559 Domain of unknown function (DUF4129) 164 234 2.2E-7 T 15-10-2018 IPR025403 Domain of unknown function DUF4129 THII_0954 7f52ce739e6f289585dcc7b6f69fe867 74 Pfam PF01724 Domain of unknown function DUF29 4 49 6.0E-15 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0954 7f52ce739e6f289585dcc7b6f69fe867 74 Gene3D G3DSA:1.20.1220.20 2 54 2.2E-12 T 15-10-2018 THII_3119 1259c6160706d436b79cd28014dcb7bc 610 Gene3D G3DSA:3.40.50.720 281 606 3.0E-112 T 15-10-2018 THII_3119 1259c6160706d436b79cd28014dcb7bc 610 SUPERFAMILY SSF51735 143 273 2.09E-15 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3119 1259c6160706d436b79cd28014dcb7bc 610 Pfam PF02719 Polysaccharide biosynthesis protein 286 568 1.7E-118 T 15-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain THII_3119 1259c6160706d436b79cd28014dcb7bc 610 SUPERFAMILY SSF51735 283 547 3.87E-55 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3119 1259c6160706d436b79cd28014dcb7bc 610 Pfam PF13727 CoA-binding domain 66 241 8.6E-20 T 15-10-2018 THII_3119 1259c6160706d436b79cd28014dcb7bc 610 Gene3D G3DSA:3.40.50.720 141 267 7.8E-37 T 15-10-2018 THII_1616 830b4ca39325a4d0e40b35b0e5b96f41 205 Gene3D G3DSA:1.10.760.10 42 205 1.0E-72 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1616 830b4ca39325a4d0e40b35b0e5b96f41 205 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 182 1.2E-85 T 15-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO THII_1616 830b4ca39325a4d0e40b35b0e5b96f41 205 SUPERFAMILY SSF46626 16 198 2.19E-30 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 THII_1616 830b4ca39325a4d0e40b35b0e5b96f41 205 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 7 180 6.3E-91 T 15-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO THII_2565 4de4746a8d847dc1eb053bacee28f073 223 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 8 209 7.2E-81 T 15-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 THII_2565 4de4746a8d847dc1eb053bacee28f073 223 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 211 27.04 T 15-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 THII_2565 4de4746a8d847dc1eb053bacee28f073 223 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 5.1E-62 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_2565 4de4746a8d847dc1eb053bacee28f073 223 PIRSF PIRSF006102 1 220 3.9E-78 T 15-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 THII_3598 c5e3b86fd354483e27bebf6c0319c9f0 462 Pfam PF13520 Amino acid permease 23 431 5.3E-51 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 THII_3598 c5e3b86fd354483e27bebf6c0319c9f0 462 PIRSF PIRSF006060 11 461 4.9E-83 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 THII_3598 c5e3b86fd354483e27bebf6c0319c9f0 462 Gene3D G3DSA:1.20.1740.10 19 461 2.4E-121 T 15-10-2018 THII_1141 f567e9c2d94f633b09fa077bd4e55c6a 329 Gene3D G3DSA:3.90.550.10 14 205 3.8E-38 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1141 f567e9c2d94f633b09fa077bd4e55c6a 329 SUPERFAMILY SSF53448 20 269 7.78E-41 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1141 f567e9c2d94f633b09fa077bd4e55c6a 329 Pfam PF00535 Glycosyl transferase family 2 21 183 2.4E-34 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0127 a41f8f43e39f561e99f954bc2842b174 322 Pfam PF01925 Sulfite exporter TauE/SafE 17 313 9.8E-37 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 THII_1655 e260bcdecdc92dd467b380deacc00a94 335 Gene3D G3DSA:3.40.109.10 147 334 7.7E-35 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 THII_1655 e260bcdecdc92dd467b380deacc00a94 335 Pfam PF00881 Nitroreductase family 167 221 2.6E-8 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 THII_1655 e260bcdecdc92dd467b380deacc00a94 335 SUPERFAMILY SSF55469 162 330 1.02E-37 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 THII_0606 9e0e2fcf60a57c7be3635ce149ecf30c 1435 Gene3D G3DSA:2.60.40.10 130 235 2.0E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0606 9e0e2fcf60a57c7be3635ce149ecf30c 1435 Gene3D G3DSA:2.60.40.10 355 465 6.3E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0606 9e0e2fcf60a57c7be3635ce149ecf30c 1435 Gene3D G3DSA:2.60.40.10 245 348 8.7E-12 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0606 9e0e2fcf60a57c7be3635ce149ecf30c 1435 Gene3D G3DSA:2.60.40.10 9 129 6.2E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0606 9e0e2fcf60a57c7be3635ce149ecf30c 1435 Gene3D G3DSA:2.60.40.10 468 579 9.6E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_0325 d6f686e3aa3db31cf412509e03f480e0 251 Pfam PF04055 Radical SAM superfamily 6 112 1.1E-9 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 THII_0325 d6f686e3aa3db31cf412509e03f480e0 251 Gene3D G3DSA:3.20.20.70 1 219 3.9E-32 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_0325 d6f686e3aa3db31cf412509e03f480e0 251 SUPERFAMILY SSF102114 6 213 4.84E-21 T 15-10-2018 THII_2299 dd439f464a3c9b3531c4540a532d640c 68 SUPERFAMILY SSF53448 8 67 1.88E-5 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0054 d8ede04bd9d5b268b21449c599f8a88b 330 SUPERFAMILY SSF51735 8 314 6.96E-95 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_0054 d8ede04bd9d5b268b21449c599f8a88b 330 PRINTS PR01713 Nucleotide sugar epimerase signature 217 232 1.2E-6 T 15-10-2018 THII_0054 d8ede04bd9d5b268b21449c599f8a88b 330 PRINTS PR01713 Nucleotide sugar epimerase signature 279 296 1.2E-6 T 15-10-2018 THII_0054 d8ede04bd9d5b268b21449c599f8a88b 330 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 1.2E-6 T 15-10-2018 THII_0054 d8ede04bd9d5b268b21449c599f8a88b 330 Gene3D G3DSA:3.40.50.720 9 300 4.4E-106 T 15-10-2018 THII_0054 d8ede04bd9d5b268b21449c599f8a88b 330 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 308 1.4E-59 T 15-10-2018 IPR016040 NAD(P)-binding domain THII_0054 d8ede04bd9d5b268b21449c599f8a88b 330 Gene3D G3DSA:3.90.25.10 177 309 4.4E-106 T 15-10-2018 THII_3893 4439cc54dea557b6ff91c81174470075 237 SUPERFAMILY SSF48452 58 195 6.83E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0282 1346184f643de9022b27a10516aed34b 80 Pfam PF12770 CHAT domain 1 80 1.0E-9 T 15-10-2018 IPR024983 CHAT domain THII_3710 21203ac6571da4824cc8cfdf85eca8ea 202 Pfam PF07027 Protein of unknown function (DUF1318) 107 202 1.6E-17 T 15-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 THII_0970 b63974f2838c396273f30865d2fb583f 454 Pfam PF01882 Protein of unknown function DUF58 260 328 2.3E-16 T 15-10-2018 IPR002881 Domain of unknown function DUF58 THII_2455 c5be2a59d7ee0556638bbc15e2b8533e 146 Pfam PF01724 Domain of unknown function DUF29 5 140 1.4E-46 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2455 c5be2a59d7ee0556638bbc15e2b8533e 146 Gene3D G3DSA:1.20.1220.20 1 146 1.8E-27 T 15-10-2018 THII_2847 5f71e36e4b02a9b6113fa4bdb93ecce0 278 SUPERFAMILY SSF54518 163 273 8.63E-5 T 15-10-2018 IPR025659 Tubby-like, C-terminal THII_1183 38434ab5ed12a9a1f450828cd7613d0a 95 SUPERFAMILY SSF81301 20 84 2.97E-7 T 15-10-2018 THII_1183 38434ab5ed12a9a1f450828cd7613d0a 95 Pfam PF01909 Nucleotidyltransferase domain 15 77 3.8E-6 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 THII_1183 38434ab5ed12a9a1f450828cd7613d0a 95 Gene3D G3DSA:3.30.460.10 1 95 3.5E-8 T 15-10-2018 THII_0753 000160c9fe2a55f8857456aeff508d55 121 Pfam PF12386 Pseudomurein endo-isopeptidase Pei 20 87 3.2E-5 T 15-10-2018 IPR022119 Peptidase C71, pseudomurein endo-isopeptidase Pei THII_3901 368905eda234ba0c308875f16d188c9d 348 Pfam PF00753 Metallo-beta-lactamase superfamily 85 155 1.8E-7 T 15-10-2018 IPR001279 Metallo-beta-lactamase THII_3901 368905eda234ba0c308875f16d188c9d 348 SUPERFAMILY SSF56281 1 327 5.63E-16 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THII_3257 092be6ebbf6d2c98df32f403edd24395 146 Pfam PF01724 Domain of unknown function DUF29 7 143 1.0E-52 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_3257 092be6ebbf6d2c98df32f403edd24395 146 Gene3D G3DSA:1.20.1220.20 2 146 9.2E-31 T 15-10-2018 THII_0248 4b65eb5f601b088a95bfc3aae1b1da44 74 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 1.8E-22 T 15-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0248 4b65eb5f601b088a95bfc3aae1b1da44 74 Pfam PF01192 RNA polymerase Rpb6 8 59 1.1E-17 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 THII_0248 4b65eb5f601b088a95bfc3aae1b1da44 74 SMART SM01409 8 60 1.9E-18 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 THII_0248 4b65eb5f601b088a95bfc3aae1b1da44 74 SUPERFAMILY SSF63562 1 66 9.55E-26 T 15-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 THII_0248 4b65eb5f601b088a95bfc3aae1b1da44 74 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 18.542 T 15-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 THII_0248 4b65eb5f601b088a95bfc3aae1b1da44 74 Gene3D G3DSA:3.90.940.10 1 71 8.6E-27 T 15-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 THII_0406 19f8b9f1ebda4649253c3070528d1c18 143 SUPERFAMILY SSF81301 4 140 4.9E-18 T 15-10-2018 THII_0406 19f8b9f1ebda4649253c3070528d1c18 143 Gene3D G3DSA:3.30.460.40 2 139 1.7E-12 T 15-10-2018 THII_2606 43f1f281d761a270945ffc7d8e32f975 337 Pfam PF04754 Putative transposase, YhgA-like 5 178 3.2E-33 T 15-10-2018 IPR006842 Transposase (putative), YhgA-like THII_0516 ffe5fb7a04f89691ffbe2c115b9e28bf 1016 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 27 72 1.6E-21 T 15-10-2018 IPR030916 ELWxxDGT repeat THII_0516 ffe5fb7a04f89691ffbe2c115b9e28bf 1016 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 544 583 6.8E-14 T 15-10-2018 IPR030916 ELWxxDGT repeat THII_0516 ffe5fb7a04f89691ffbe2c115b9e28bf 1016 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 170 213 2.2E-19 T 15-10-2018 IPR030916 ELWxxDGT repeat THII_0516 ffe5fb7a04f89691ffbe2c115b9e28bf 1016 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 225 245 2.4E-6 T 15-10-2018 IPR030916 ELWxxDGT repeat THII_0516 ffe5fb7a04f89691ffbe2c115b9e28bf 1016 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 604 636 6.7E-6 T 15-10-2018 IPR030916 ELWxxDGT repeat THII_0516 ffe5fb7a04f89691ffbe2c115b9e28bf 1016 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 284 319 1.4E-7 T 15-10-2018 IPR030916 ELWxxDGT repeat THII_0516 ffe5fb7a04f89691ffbe2c115b9e28bf 1016 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 660 705 9.9E-20 T 15-10-2018 IPR030916 ELWxxDGT repeat THII_0516 ffe5fb7a04f89691ffbe2c115b9e28bf 1016 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 321 344 1.4E-9 T 15-10-2018 IPR030916 ELWxxDGT repeat THII_0516 ffe5fb7a04f89691ffbe2c115b9e28bf 1016 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 75 121 4.9E-23 T 15-10-2018 IPR030916 ELWxxDGT repeat THII_0516 ffe5fb7a04f89691ffbe2c115b9e28bf 1016 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 123 155 1.2E-11 T 15-10-2018 IPR030916 ELWxxDGT repeat THII_0887 d3358ba73bbbd2981370cf03baa924e3 142 Gene3D G3DSA:1.20.1220.20 31 142 7.9E-13 T 15-10-2018 THII_0887 d3358ba73bbbd2981370cf03baa924e3 142 Pfam PF01724 Domain of unknown function DUF29 34 136 7.6E-25 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_3393 3c412683e4936b99644f226b10dd3cd1 507 SUPERFAMILY SSF102588 90 350 1.01E-21 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 THII_3393 3c412683e4936b99644f226b10dd3cd1 507 Gene3D G3DSA:3.40.50.10320 86 351 4.3E-36 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 THII_3393 3c412683e4936b99644f226b10dd3cd1 507 Pfam PF02585 GlcNAc-PI de-N-acetylase 93 248 2.6E-8 T 15-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 THII_1606 29715346f4d406145fa451fc42857954 442 Gene3D G3DSA:3.40.960.10 332 442 1.2E-9 T 15-10-2018 THII_1652 a2336c7632f317988903bdf9d02de997 353 SUPERFAMILY SSF53448 48 262 1.07E-8 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2518 6b8f2c1e0b9e53838333f98a45010330 423 SUPERFAMILY SSF53067 36 156 4.92E-5 T 15-10-2018 THII_2196 99bb796ad9569c50f5eb8bd0c8b5e0d8 292 Pfam PF13546 DDE superfamily endonuclease 11 266 2.1E-31 T 15-10-2018 IPR038721 Transposase IS701-like, DDE domain THII_2638 172e8bec3f6ff2f803af7b2dd95d4369 325 SUPERFAMILY SSF53448 2 273 4.84E-58 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2638 172e8bec3f6ff2f803af7b2dd95d4369 325 Gene3D G3DSA:3.90.550.10 1 239 4.4E-56 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2638 172e8bec3f6ff2f803af7b2dd95d4369 325 Pfam PF00535 Glycosyl transferase family 2 6 150 3.4E-26 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_2620 41e6dece666d5bd4bb649f8b45e20f4c 126 SUPERFAMILY SSF46689 2 54 9.56E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 THII_2620 41e6dece666d5bd4bb649f8b45e20f4c 126 Pfam PF01710 Transposase 1 117 2.3E-23 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_2386 6c6b37175c4b6fd6f9a78f74beda71a7 73 Pfam PF10047 Protein of unknown function (DUF2281) 7 71 1.1E-22 T 15-10-2018 IPR018739 Domain of unknown function DUF2281 THII_2449 a0da492547bdafcfb46856d0677a2640 214 Pfam PF02589 LUD domain 107 210 1.9E-22 T 15-10-2018 IPR003741 LUD domain THII_2449 a0da492547bdafcfb46856d0677a2640 214 Gene3D G3DSA:3.40.50.10420 42 211 1.8E-37 T 15-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily THII_2449 a0da492547bdafcfb46856d0677a2640 214 SUPERFAMILY SSF100950 46 210 2.18E-35 T 15-10-2018 IPR037171 NagB/RpiA transferase-like THII_1155 ff30dd682d0e184d1fbebfd5324b9f6c 297 Pfam PF07788 PD-(D/E)XK nuclease superfamily 216 284 1.2E-24 T 15-10-2018 IPR012431 PD-(D/E)XK nuclease THII_1155 ff30dd682d0e184d1fbebfd5324b9f6c 297 Pfam PF12644 Protein of unknown function (DUF3782) 137 215 3.5E-21 T 15-10-2018 IPR024271 Protein of unknown function DUF3782 THII_1155 ff30dd682d0e184d1fbebfd5324b9f6c 297 SUPERFAMILY SSF52980 79 294 4.61E-8 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_2476 4dcf6f4b06d3262f7d7b797dd7f283a6 85 Pfam PF02397 Bacterial sugar transferase 1 79 2.3E-23 T 15-10-2018 IPR003362 Bacterial sugar transferase THII_3795 d3fe0ac31147fb1e926d8fb1032d89af 127 Pfam PF13682 Chemoreceptor zinc-binding domain 14 82 6.9E-11 T 15-10-2018 IPR025991 Chemoreceptor zinc-binding domain THII_2590 345f462130b90ad3b2208e310457d8ac 135 Gene3D G3DSA:1.20.1220.20 2 133 1.6E-28 T 15-10-2018 THII_2590 345f462130b90ad3b2208e310457d8ac 135 Pfam PF01724 Domain of unknown function DUF29 8 129 7.8E-45 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2414 3501aa0bd81bd874bc309a6be4a0d1b8 217 SUPERFAMILY SSF53335 80 183 2.84E-17 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_2414 3501aa0bd81bd874bc309a6be4a0d1b8 217 Pfam PF13489 Methyltransferase domain 80 180 1.4E-12 T 15-10-2018 THII_2414 3501aa0bd81bd874bc309a6be4a0d1b8 217 Gene3D G3DSA:3.40.50.150 53 208 1.9E-19 T 15-10-2018 THII_0059 0728ee70001c06901323827dba22dd4a 263 SUPERFAMILY SSF52499 1 256 1.57E-13 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 THII_0059 0728ee70001c06901323827dba22dd4a 263 Gene3D G3DSA:3.40.50.850 4 258 2.7E-40 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 THII_1559 322aef1e44a6ae7b4ad8c4bbbbdb4a8c 173 SUPERFAMILY SSF52980 62 168 2.31E-13 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1559 322aef1e44a6ae7b4ad8c4bbbbdb4a8c 173 Gene3D G3DSA:3.90.1570.10 11 171 5.5E-17 T 15-10-2018 THII_1559 322aef1e44a6ae7b4ad8c4bbbbdb4a8c 173 Pfam PF05685 Putative restriction endonuclease 20 137 1.4E-10 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1786 ff2171129707f34a91b5a909d12077a0 405 SMART SM00758 99 239 0.0056 T 15-10-2018 IPR011658 PA14 domain THII_1786 ff2171129707f34a91b5a909d12077a0 405 Pfam PF07691 PA14 domain 104 226 3.4E-10 T 15-10-2018 IPR011658 PA14 domain THII_1786 ff2171129707f34a91b5a909d12077a0 405 TIGRFAM TIGR02148 Fibro_Slime: fibro-slime domain 140 225 7.2E-26 T 15-10-2018 IPR011874 Fibro-slime THII_1645 53e05b2b8676e42035b9c428568ad750 355 Pfam PF04230 Polysaccharide pyruvyl transferase 1 292 3.4E-36 T 15-10-2018 IPR007345 Polysaccharide pyruvyl transferase THII_1788 e0560ca116d720d5a764efbf45157e0e 151 SUPERFAMILY SSF52980 11 137 4.88E-20 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1788 e0560ca116d720d5a764efbf45157e0e 151 Gene3D G3DSA:3.90.1570.10 2 151 3.5E-22 T 15-10-2018 THII_1788 e0560ca116d720d5a764efbf45157e0e 151 Pfam PF05685 Putative restriction endonuclease 20 133 4.9E-16 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_1742 e7d5f8622a7a5288802da558945e1222 276 Pfam PF01148 Cytidylyltransferase family 3 268 4.0E-55 T 15-10-2018 THII_1742 e7d5f8622a7a5288802da558945e1222 276 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 230 256 - T 15-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 THII_0816 13647d859c3eb39ff4db92f29d27963a 280 SUPERFAMILY SSF51658 10 207 8.29E-13 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily THII_0816 13647d859c3eb39ff4db92f29d27963a 280 Gene3D G3DSA:3.20.20.150 5 279 9.5E-87 T 15-10-2018 THII_0816 13647d859c3eb39ff4db92f29d27963a 280 Hamap MF_00697 UPF0276 protein . 9 277 44.987 T 15-10-2018 IPR007801 Uncharacterised protein family UPF0276 THII_0816 13647d859c3eb39ff4db92f29d27963a 280 Pfam PF05114 Protein of unknown function (DUF692) 8 268 5.5E-103 T 15-10-2018 IPR007801 Uncharacterised protein family UPF0276 THII_0384 29d3719e4e9af922514dcdfd284a02e5 280 Pfam PF00950 ABC 3 transport family 6 274 7.0E-69 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 THII_0384 29d3719e4e9af922514dcdfd284a02e5 280 Gene3D G3DSA:1.10.3470.10 35 278 8.5E-10 T 15-10-2018 IPR037294 ABC transporter, BtuC-like THII_0384 29d3719e4e9af922514dcdfd284a02e5 280 SUPERFAMILY SSF81345 3 270 7.98E-37 T 15-10-2018 IPR037294 ABC transporter, BtuC-like THII_1075 870ab278871d42bcd5338252f63010e9 109 Pfam PF03683 Uncharacterised protein family (UPF0175) 25 97 3.5E-17 T 15-10-2018 IPR005368 Uncharacterised protein family UPF0175 THII_1091 4e7db13374721a51465ed1c80b045e95 313 SUPERFAMILY SSF53448 1 244 4.38E-46 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1091 4e7db13374721a51465ed1c80b045e95 313 Pfam PF00535 Glycosyl transferase family 2 3 158 5.5E-30 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_1091 4e7db13374721a51465ed1c80b045e95 313 Gene3D G3DSA:3.90.550.10 1 231 4.5E-45 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3394 56ed1919c5080d9fa2a222c253c3392a 317 Pfam PF13641 Glycosyltransferase like family 2 3 237 9.9E-16 T 15-10-2018 THII_3394 56ed1919c5080d9fa2a222c253c3392a 317 Gene3D G3DSA:3.90.550.10 1 243 7.7E-43 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3394 56ed1919c5080d9fa2a222c253c3392a 317 SUPERFAMILY SSF53448 5 274 6.56E-45 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_3307 cef10133d9c4247ee4d67c52a5e79e9b 284 Pfam PF05853 beta-keto acid cleavage enzyme 7 275 1.7E-86 T 15-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 THII_3307 cef10133d9c4247ee4d67c52a5e79e9b 284 Gene3D G3DSA:3.20.20.70 2 278 4.7E-91 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 THII_3085 5aff7813d917190572393d76ad31f562 148 Pfam PF04319 NifZ domain 4 73 1.5E-28 T 15-10-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 THII_0077 2c5db4f3a39f418f251b334f28c468aa 232 Pfam PF03050 Transposase IS66 family 30 196 4.4E-16 T 15-10-2018 IPR004291 Transposase, IS66 THII_0004 43e2c4fe9c37321b399d293826a54028 100 SUPERFAMILY SSF88723 13 67 2.49E-5 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_0690 c4169b224a0f0c2b9fbb4cfdb078c186 379 SUPERFAMILY SSF48452 158 364 1.06E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_0690 c4169b224a0f0c2b9fbb4cfdb078c186 379 Gene3D G3DSA:1.25.40.10 131 374 1.2E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 THII_1224 c4cf30a38530cb2a630be9b6370d3906 48 Pfam PF11295 Protein of unknown function (DUF3096) 10 44 5.7E-14 T 15-10-2018 IPR021446 Protein of unknown function DUF3096 THII_0789 24fc1cc4566c85953cbb743a5854d0a3 280 Pfam PF12784 PD-(D/E)XK nuclease family transposase 6 219 7.5E-57 T 15-10-2018 THII_0789 24fc1cc4566c85953cbb743a5854d0a3 280 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 7 276 4.8E-46 T 15-10-2018 IPR010106 Recombination-promoting nuclease RpnA THII_3662 56149399387e765cda0de134f71f9dd9 362 Gene3D G3DSA:3.90.25.10 191 351 1.1E-131 T 15-10-2018 THII_3662 56149399387e765cda0de134f71f9dd9 362 SUPERFAMILY SSF51735 3 310 4.93E-41 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily THII_3662 56149399387e765cda0de134f71f9dd9 362 Gene3D G3DSA:3.40.50.720 1 276 1.1E-131 T 15-10-2018 THII_3662 56149399387e765cda0de134f71f9dd9 362 Pfam PF01370 NAD dependent epimerase/dehydratase family 39 265 7.8E-20 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 THII_3246 2646d77a604fd2019d59e9650bf950f0 282 SMART SM00749 217 280 0.074 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria THII_3246 2646d77a604fd2019d59e9650bf950f0 282 SMART SM00749 43 106 26.0 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria THII_3246 2646d77a604fd2019d59e9650bf950f0 282 SMART SM00749 130 193 4.2E-4 T 15-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria THII_3246 2646d77a604fd2019d59e9650bf950f0 282 Pfam PF04972 BON domain 42 105 5.4E-12 T 15-10-2018 IPR007055 BON domain THII_3246 2646d77a604fd2019d59e9650bf950f0 282 Pfam PF04972 BON domain 212 279 3.6E-15 T 15-10-2018 IPR007055 BON domain THII_3246 2646d77a604fd2019d59e9650bf950f0 282 Pfam PF04972 BON domain 125 193 1.8E-16 T 15-10-2018 IPR007055 BON domain THII_2553 de4f769e556c1d7ab9c6859479a41c2f 144 Pfam PF04892 VanZ like family 22 129 1.9E-7 T 15-10-2018 IPR006976 VanZ-like THII_3813 75cb565f0a7161cbaf1abb1a2fdc37a5 273 Pfam PF12784 PD-(D/E)XK nuclease family transposase 23 206 1.8E-7 T 15-10-2018 THII_0609 b2e83e423dd0ddd07665f9d1ae9390f2 89 SUPERFAMILY SSF88723 25 89 3.92E-5 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_3250 d5b7fbff0a8222243162b202d1a79e8c 175 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 78 165 2.0E-15 T 15-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 THII_2823 931e9415c89530e5d1dd363582b447c4 528 Gene3D G3DSA:3.50.50.60 454 528 3.2E-18 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_2823 931e9415c89530e5d1dd363582b447c4 528 Pfam PF01266 FAD dependent oxidoreductase 17 229 5.9E-9 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 THII_2823 931e9415c89530e5d1dd363582b447c4 528 Pfam PF05199 GMC oxidoreductase 390 517 7.1E-24 T 15-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 THII_2823 931e9415c89530e5d1dd363582b447c4 528 SUPERFAMILY SSF51905 14 525 2.51E-48 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily THII_1825 8a3a779942ff28eacb8f37f35c15bfbe 191 Gene3D G3DSA:3.30.420.10 1 191 5.5E-76 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 THII_1825 8a3a779942ff28eacb8f37f35c15bfbe 191 SUPERFAMILY SSF53098 3 191 3.64E-68 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily THII_1825 8a3a779942ff28eacb8f37f35c15bfbe 191 Hamap MF_00052_B Ribonuclease HII [rnhB]. 7 186 38.461 T 15-10-2018 IPR022898 Ribonuclease HII GO:0004523 THII_1825 8a3a779942ff28eacb8f37f35c15bfbe 191 Pfam PF01351 Ribonuclease HII 9 185 7.6E-43 T 15-10-2018 IPR024567 Ribonuclease HII/HIII domain THII_2417 5bb32409de3157908bb90a28577e4605 379 SUPERFAMILY SSF49854 76 130 6.54E-6 T 15-10-2018 IPR035914 Spermadhesin, CUB domain superfamily THII_2417 5bb32409de3157908bb90a28577e4605 379 Gene3D G3DSA:2.60.120.290 22 132 7.0E-7 T 15-10-2018 IPR035914 Spermadhesin, CUB domain superfamily THII_0198 5ec2dbf1a7922f2454bc1fe0f0024caf 185 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 158 3.8E-46 T 15-10-2018 IPR018639 Domain of unknown function DUF2062 THII_1225 41ca6f0ce932f8aad8ef2df38acc36f5 264 Pfam PF00535 Glycosyl transferase family 2 25 186 4.9E-26 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_1225 41ca6f0ce932f8aad8ef2df38acc36f5 264 Gene3D G3DSA:3.90.550.10 11 260 1.0E-37 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1225 41ca6f0ce932f8aad8ef2df38acc36f5 264 SUPERFAMILY SSF53448 14 237 1.05E-42 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2485 447561bdaff6b7cd40c93714f0c485b8 111 Pfam PF03400 IS1 transposase 11 104 2.2E-12 T 15-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 THII_2335 90aebac9955065de7475950910e0d85e 343 Pfam PF13665 Domain of unknown function (DUF4150) 21 132 1.5E-35 T 15-10-2018 IPR025425 Domain of unknown function DUF4150 THII_2335 90aebac9955065de7475950910e0d85e 343 Pfam PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 207 310 8.8E-14 T 15-10-2018 IPR028917 Tox-GHH2 domain THII_2422 71b443c69af11ba6740fb316e3161d15 125 Gene3D G3DSA:1.20.1270.390 38 125 2.9E-14 T 15-10-2018 THII_2422 71b443c69af11ba6740fb316e3161d15 125 Pfam PF14346 Domain of unknown function (DUF4398) 28 124 7.8E-15 T 15-10-2018 IPR025511 Domain of unknown function DUF4398 THII_2137 fa2b71a59a48b0ca6a442842d7742bfb 231 Pfam PF03988 Repeat of Unknown Function (DUF347) 100 150 5.0E-14 T 15-10-2018 IPR007136 Protein of unknown function DUF347 THII_2137 fa2b71a59a48b0ca6a442842d7742bfb 231 Pfam PF03988 Repeat of Unknown Function (DUF347) 35 85 7.1E-17 T 15-10-2018 IPR007136 Protein of unknown function DUF347 THII_2137 fa2b71a59a48b0ca6a442842d7742bfb 231 Pfam PF03988 Repeat of Unknown Function (DUF347) 155 207 4.4E-13 T 15-10-2018 IPR007136 Protein of unknown function DUF347 THII_3408 736d83cfcd0d2d0c1526498183cfe33c 146 Gene3D G3DSA:1.20.1220.20 2 146 1.4E-32 T 15-10-2018 THII_3408 736d83cfcd0d2d0c1526498183cfe33c 146 Pfam PF01724 Domain of unknown function DUF29 7 143 4.4E-50 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_3632 7062de0f8f4dc2190cda60da2c7d3191 434 SUPERFAMILY SSF53300 232 359 2.97E-10 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_3632 7062de0f8f4dc2190cda60da2c7d3191 434 Gene3D G3DSA:3.40.50.410 227 364 1.1E-7 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_3632 7062de0f8f4dc2190cda60da2c7d3191 434 Pfam PF01882 Protein of unknown function DUF58 191 276 2.0E-22 T 15-10-2018 IPR002881 Domain of unknown function DUF58 THII_3483 63d33b830424ce5ec7697abd0ea62ee2 320 Gene3D G3DSA:3.90.1580.10 128 318 1.5E-12 T 15-10-2018 THII_3483 63d33b830424ce5ec7697abd0ea62ee2 320 Pfam PF03781 Sulfatase-modifying factor enzyme 1 136 274 2.0E-13 T 15-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 THII_3483 63d33b830424ce5ec7697abd0ea62ee2 320 SUPERFAMILY SSF56436 132 318 2.12E-20 T 15-10-2018 IPR016187 C-type lectin fold THII_2657 7600ece38a93f0f1b9ad02ff19687a76 118 Pfam PF09361 Phasin protein 7 103 1.5E-10 T 15-10-2018 IPR018968 Phasin THII_3122 9e88ad9ea2c1f48425ad1b6217c8f436 347 Gene3D G3DSA:3.40.50.1110 97 337 1.9E-18 T 15-10-2018 IPR036514 SGNH hydrolase superfamily THII_3122 9e88ad9ea2c1f48425ad1b6217c8f436 347 SUPERFAMILY SSF52266 96 335 7.33E-20 T 15-10-2018 THII_2001 30a0512462d26ff83fb85cdceec032d5 77 Gene3D G3DSA:2.10.260.10 2 77 1.2E-12 T 15-10-2018 THII_2001 30a0512462d26ff83fb85cdceec032d5 77 SUPERFAMILY SSF89447 1 67 4.45E-9 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily THII_0960 200ec46ef859f3e0d45b21d9fb4aeedb 79 Pfam PF10047 Protein of unknown function (DUF2281) 7 39 4.0E-8 T 15-10-2018 IPR018739 Domain of unknown function DUF2281 THII_3561 c93b622b63664043144a97505c89d565 183 Pfam PF05685 Putative restriction endonuclease 21 165 2.5E-14 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3423 66dcb52f912d2ed71e16fa66cd2d89e9 266 Pfam PF07786 Protein of unknown function (DUF1624) 31 248 1.1E-60 T 15-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 THII_1681 4cd69375b65459e0eeb844280bd0fd3f 297 Pfam PF14261 Domain of unknown function (DUF4351) 241 295 1.5E-12 T 15-10-2018 IPR025587 Domain of unknown function DUF4351 THII_2626 faa0adbd97b67df198dbc30562874097 231 Gene3D G3DSA:3.40.50.1820 42 213 1.4E-7 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_2626 faa0adbd97b67df198dbc30562874097 231 SUPERFAMILY SSF53474 46 153 5.5E-9 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_0890 cafcd1c614398c381c1374d3f2bd4222 736 Pfam PF00350 Dynamin family 95 301 3.1E-8 T 15-10-2018 IPR022812 Dynamin superfamily THII_0890 cafcd1c614398c381c1374d3f2bd4222 736 SUPERFAMILY SSF52540 84 349 3.42E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0664 926a232dc6cd1ca2597eb7b98154011b 374 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 240 338 1.1E-32 T 15-10-2018 IPR019236 Domain of unknown function DUF2183 THII_2557 90a3b31644ec6c253aa4c526640743af 367 Pfam PF03235 Protein of unknown function DUF262 33 188 1.0E-18 T 15-10-2018 IPR004919 Domain of unknown function DUF262 THII_0116 f36ebeb50b937e0c7bd641f35ce37507 64 SUPERFAMILY SSF143120 16 51 4.97E-6 T 15-10-2018 IPR036165 YefM-like superfamily THII_1641 3391ae1d553fd45aff8477355a22cf74 370 Pfam PF04230 Polysaccharide pyruvyl transferase 13 307 1.1E-37 T 15-10-2018 IPR007345 Polysaccharide pyruvyl transferase THII_2246 285a7ea4e1dadb082b85cbd8eccece86 408 Pfam PF13362 Toprim domain 52 141 2.0E-12 T 15-10-2018 IPR006171 TOPRIM domain THII_1467 8fa9e173b3b8d065947e13ada05397e2 249 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 1.2E-79 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase THII_1467 8fa9e173b3b8d065947e13ada05397e2 249 SUPERFAMILY SSF64438 3 243 1.56E-87 T 15-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic THII_1467 8fa9e173b3b8d065947e13ada05397e2 249 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 4.1E-66 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase THII_1467 8fa9e173b3b8d065947e13ada05397e2 249 Gene3D G3DSA:3.60.140.10 1 246 7.4E-95 T 15-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily THII_0678 3e216f496eedd85f618e28c81e0ea427 64 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 3.4E-23 T 15-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type THII_0678 3e216f496eedd85f618e28c81e0ea427 64 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 48 4.1E-20 T 15-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type THII_1410 73b3ea42e0629ca70d2e7f542af0feec 259 SUPERFAMILY SSF52540 30 219 2.16E-7 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1410 73b3ea42e0629ca70d2e7f542af0feec 259 Gene3D G3DSA:3.40.50.300 31 246 3.9E-31 T 15-10-2018 THII_2741 6744b65e03ed84a5e80a1c047880c27d 88 Gene3D G3DSA:3.30.1360.100 16 87 4.2E-6 T 15-10-2018 THII_2484 2f0bb9e3df93ff6f1c9779ebc672ed06 108 Pfam PF15647 Restriction endonuclease fold toxin 3 45 104 1.7E-19 T 15-10-2018 IPR028905 Tox-REase-3 domain THII_1240 f3f8cb81dbadc9d87d1e02323f66b2ce 166 SUPERFAMILY SSF52980 4 158 1.66E-71 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_1240 f3f8cb81dbadc9d87d1e02323f66b2ce 166 Pfam PF09225 Restriction endonuclease PvuII 6 158 3.5E-73 T 15-10-2018 IPR015306 Restriction endonuclease, type II, PvuII THII_1240 f3f8cb81dbadc9d87d1e02323f66b2ce 166 Gene3D G3DSA:3.40.210.10 2 158 2.2E-73 T 15-10-2018 IPR038402 Restriction endonuclease, type II, PvuII superfamily THII_3031 ffc0b40433cf4d40344ec41d367ab972 777 Pfam PF00092 von Willebrand factor type A domain 588 749 3.9E-6 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_3031 ffc0b40433cf4d40344ec41d367ab972 777 Gene3D G3DSA:3.40.50.410 579 761 3.9E-14 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_3031 ffc0b40433cf4d40344ec41d367ab972 777 SUPERFAMILY SSF53300 586 770 1.1E-20 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_3031 ffc0b40433cf4d40344ec41d367ab972 777 SMART SM00327 585 766 2.1E-10 T 15-10-2018 IPR002035 von Willebrand factor, type A THII_2839 ad2878de1e72cb2ada40c77172e1cd3b 1248 SUPERFAMILY SSF52540 30 208 4.48E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_2839 ad2878de1e72cb2ada40c77172e1cd3b 1248 Gene3D G3DSA:3.40.50.300 50 247 2.5E-5 T 15-10-2018 THII_2761 e8e0a59de524f11eba3a9f511c939b34 97 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 8 90 3.0E-31 T 15-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 THII_0237 14a40002910ccd451117631fb7699d84 113 SUPERFAMILY SSF55718 27 105 5.42E-5 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily THII_1999 1f1f889a3de4da97c65037c2aada124f 597 Pfam PF04865 Baseplate J-like protein 258 435 1.3E-16 T 15-10-2018 IPR006949 Baseplate protein J-like THII_1443 25134c2f0e15226cadd8508c81f0da86 576 SUPERFAMILY SSF88713 4 465 1.8E-86 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 THII_1443 25134c2f0e15226cadd8508c81f0da86 576 Gene3D G3DSA:3.20.110.20 205 492 6.4E-20 T 15-10-2018 THII_1443 25134c2f0e15226cadd8508c81f0da86 576 Pfam PF03065 Glycosyl hydrolase family 57 9 478 5.9E-73 T 15-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 THII_3018 ff29038ac6b0d24b96d3792590638751 443 Pfam PF01565 FAD binding domain 35 147 2.6E-20 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 THII_3018 ff29038ac6b0d24b96d3792590638751 443 Gene3D G3DSA:3.30.465.10 63 179 1.3E-19 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 THII_3018 ff29038ac6b0d24b96d3792590638751 443 SUPERFAMILY SSF56176 34 176 1.4E-33 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 THII_0724 e1e220b214b4b5776880f8c831dd8071 956 Pfam PF01555 DNA methylase 108 159 1.7E-9 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 THII_0724 e1e220b214b4b5776880f8c831dd8071 956 Pfam PF01555 DNA methylase 528 672 2.6E-7 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 THII_0724 e1e220b214b4b5776880f8c831dd8071 956 Gene3D G3DSA:3.40.50.150 517 711 3.1E-15 T 15-10-2018 THII_0724 e1e220b214b4b5776880f8c831dd8071 956 SUPERFAMILY SSF53335 524 665 5.23E-17 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0724 e1e220b214b4b5776880f8c831dd8071 956 SUPERFAMILY SSF53335 47 215 3.62E-17 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3023 eb12d0f55f97c74440812017e002d4f1 65 Pfam PF10047 Protein of unknown function (DUF2281) 7 52 3.2E-6 T 15-10-2018 IPR018739 Domain of unknown function DUF2281 THII_3856 e615f872a2afc67d3be749275360c823 226 SUPERFAMILY SSF81301 35 154 7.85E-10 T 15-10-2018 THII_3856 e615f872a2afc67d3be749275360c823 226 Gene3D G3DSA:3.30.460.40 25 155 1.7E-6 T 15-10-2018 THII_3026 88441700aff6b107845bb370da8d5821 176 Pfam PF02627 Carboxymuconolactone decarboxylase family 55 105 2.1E-9 T 15-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 THII_3026 88441700aff6b107845bb370da8d5821 176 Gene3D G3DSA:1.20.1290.10 17 175 9.2E-24 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 THII_3026 88441700aff6b107845bb370da8d5821 176 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 60 106 1.4E-13 T 15-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 THII_3026 88441700aff6b107845bb370da8d5821 176 SUPERFAMILY SSF69118 1 174 5.28E-36 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 THII_3154 124a79bd98b107206603e39f83230d2d 187 Pfam PF05685 Putative restriction endonuclease 22 171 2.8E-31 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3154 124a79bd98b107206603e39f83230d2d 187 SUPERFAMILY SSF52980 4 179 4.02E-22 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3154 124a79bd98b107206603e39f83230d2d 187 Gene3D G3DSA:3.90.1570.10 6 185 1.0E-15 T 15-10-2018 THII_0989 e3ae29430d7038201c360771c19bca6a 289 SUPERFAMILY SSF53448 21 164 2.39E-14 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_0989 e3ae29430d7038201c360771c19bca6a 289 Gene3D G3DSA:3.90.550.10 18 205 3.6E-7 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_2807 1bf629a1b69fea51213682bd2c93f2e2 480 Pfam PF10709 Protein of unknown function (DUF2511) 394 478 7.3E-7 T 15-10-2018 IPR019648 Protein of unknown function DUF2511 THII_3115 efa8f4015cdbe1104070931db0d4ea1c 334 SUPERFAMILY SSF103647 173 264 3.01E-23 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_3115 efa8f4015cdbe1104070931db0d4ea1c 334 Pfam PF02412 Thrombospondin type 3 repeat 198 232 1.1E-10 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3115 efa8f4015cdbe1104070931db0d4ea1c 334 Pfam PF02412 Thrombospondin type 3 repeat 174 196 9.4E-5 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3115 efa8f4015cdbe1104070931db0d4ea1c 334 Pfam PF02412 Thrombospondin type 3 repeat 233 264 1.3E-6 T 15-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 THII_3115 efa8f4015cdbe1104070931db0d4ea1c 334 Gene3D G3DSA:4.10.1080.10 146 270 4.3E-28 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 THII_2948 ca3602104f9f06cab6247a3504705210 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.559 T 15-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 THII_2948 ca3602104f9f06cab6247a3504705210 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 96 1.3E-23 T 15-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like THII_2770 f22ef0477aa391f769d19379bf040b6b 83 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 1 42 7.4E-15 T 15-10-2018 IPR025161 Putative transposase IS4/IS5 family THII_2785 9d1263f73faf59b960aa5e0fc1b2c932 209 Pfam PF05175 Methyltransferase small domain 37 122 3.2E-11 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 THII_2785 9d1263f73faf59b960aa5e0fc1b2c932 209 Gene3D G3DSA:3.40.50.150 8 185 1.8E-27 T 15-10-2018 THII_2785 9d1263f73faf59b960aa5e0fc1b2c932 209 SUPERFAMILY SSF53335 36 169 8.74E-25 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_0279 1fcf279fb8f9f5bf528113abc23422a0 198 SUPERFAMILY SSF52980 15 167 3.86E-21 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0279 1fcf279fb8f9f5bf528113abc23422a0 198 Gene3D G3DSA:3.90.1570.10 11 194 6.3E-15 T 15-10-2018 THII_0279 1fcf279fb8f9f5bf528113abc23422a0 198 Pfam PF05685 Putative restriction endonuclease 28 179 4.1E-30 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_2451 f3df6f5dbae762c3bd5e1cf0ca47cd85 733 Pfam PF00188 Cysteine-rich secretory protein family 74 178 1.5E-4 T 15-10-2018 IPR014044 CAP domain THII_2451 f3df6f5dbae762c3bd5e1cf0ca47cd85 733 SUPERFAMILY SSF55797 64 181 8.11E-6 T 15-10-2018 IPR035940 CAP superfamily THII_3677 c06ef1042dce41729c07f8038b17c720 391 Pfam PF01594 AI-2E family transporter 41 382 1.0E-34 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like THII_0044 eba04ec343a9c0d1bc0671f9550f5d99 135 Gene3D G3DSA:1.20.1220.20 2 135 3.0E-27 T 15-10-2018 THII_0044 eba04ec343a9c0d1bc0671f9550f5d99 135 Pfam PF01724 Domain of unknown function DUF29 9 134 4.8E-47 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0265 ece72238f4c5da43bc6e0ae035437a95 115 Pfam PF14333 Domain of unknown function (DUF4389) 14 86 2.5E-24 T 15-10-2018 IPR025498 Protein of unknown function DUF4389 THII_0735 dca33ba5e75d32dff288d5d1e1120df8 254 Gene3D G3DSA:3.40.50.300 1 254 2.8E-65 T 15-10-2018 THII_0735 dca33ba5e75d32dff288d5d1e1120df8 254 SUPERFAMILY SSF52540 2 252 3.11E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0735 dca33ba5e75d32dff288d5d1e1120df8 254 Pfam PF00685 Sulfotransferase domain 6 199 1.9E-16 T 15-10-2018 IPR000863 Sulfotransferase domain GO:0008146 THII_0023 1dd3b5b999bc292f80ed00a9331adc71 187 Gene3D G3DSA:3.30.1460.40 9 152 2.6E-6 T 15-10-2018 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily THII_0023 1dd3b5b999bc292f80ed00a9331adc71 187 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 19 176 3.3E-14 T 15-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE THII_0988 25d7b4fca4f9d355127f1d9215c88f45 401 Pfam PF04932 O-Antigen ligase 180 326 1.4E-20 T 15-10-2018 IPR007016 O-antigen ligase-related THII_1793 77bc33754fb4e1c9c374b46a02fa4d03 175 Pfam PF07295 Zinc-ribbon containing domain 28 167 1.6E-42 T 15-10-2018 IPR009912 Zinc-ribbon containing domain THII_3181 3699eb334a29cfcc80b8fd3155568f93 167 Gene3D G3DSA:3.30.450.20 17 165 9.2E-22 T 15-10-2018 THII_3181 3699eb334a29cfcc80b8fd3155568f93 167 Pfam PF08269 Cache domain 59 157 6.0E-13 T 15-10-2018 IPR004010 Double Cache domain 2 THII_3531 dd45d0a724166b9236fed762f8470f7f 151 Pfam PF00805 Pentapeptide repeats (8 copies) 72 111 1.7E-15 T 15-10-2018 IPR001646 Pentapeptide repeat THII_3531 dd45d0a724166b9236fed762f8470f7f 151 SUPERFAMILY SSF141571 40 143 2.09E-34 T 15-10-2018 THII_3531 dd45d0a724166b9236fed762f8470f7f 151 Gene3D G3DSA:2.160.20.80 31 150 9.7E-38 T 15-10-2018 THII_2334 fbdd589eaf0bea2e6ea0f56196945d01 165 Pfam PF05751 FixH 13 146 3.5E-28 T 15-10-2018 IPR008620 Nitrogen fixation protein FixH THII_0926 94f44937766101409817bc274520a614 532 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 87 237 2.5E-7 T 15-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like THII_1060 9ce993c6c664de1c66b128bba980903c 332 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 7 312 3.6E-25 T 15-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD THII_1912 3ef751826cc21e05ccea7238dc627047 308 Gene3D G3DSA:3.90.550.10 2 216 1.6E-41 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1912 3ef751826cc21e05ccea7238dc627047 308 SUPERFAMILY SSF53448 7 250 1.88E-44 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases THII_1912 3ef751826cc21e05ccea7238dc627047 308 Pfam PF00535 Glycosyl transferase family 2 13 166 5.4E-19 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 THII_0161 61722ddefe726b47fb55168008883f7b 140 Pfam PF10130 PIN domain 12 128 2.6E-24 T 15-10-2018 IPR002716 PIN domain THII_0161 61722ddefe726b47fb55168008883f7b 140 SUPERFAMILY SSF88723 11 134 2.41E-10 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_1763 9f9c22c2357648adff7ef942de94d7af 223 Pfam PF14103 Domain of unknown function (DUF4276) 10 191 6.2E-15 T 15-10-2018 IPR025455 Protein of unknown function DUF4276 THII_1005 0f4871e9666df59160d19b1b2f1f6e24 250 Pfam PF09850 Type VI secretion system protein DotU 15 224 5.3E-25 T 15-10-2018 IPR017732 Type IV / VI secretion system, DotU THII_1005 0f4871e9666df59160d19b1b2f1f6e24 250 Gene3D G3DSA:1.25.40.590 8 185 5.0E-28 T 15-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily THII_2362 a2fbfd248e6126667975c6e39713a438 143 Pfam PF06271 RDD family 16 135 1.0E-21 T 15-10-2018 IPR010432 RDD THII_0620 6909530c421ffcc3414deac5a0b89e22 120 SUPERFAMILY SSF48695 30 109 3.73E-8 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily THII_0521 09caaf3407dbd3698b8dbdf10cd18129 76 Pfam PF13711 Domain of unknown function (DUF4160) 1 61 6.1E-22 T 15-10-2018 IPR025427 Protein of unknown function DUF4160 THII_1120 7bd751f8fe4e324ec237188756669ce0 116 SUPERFAMILY SSF52402 1 111 3.1E-6 T 15-10-2018 THII_1470 a96405af873e6443620e8d8951870e4a 782 Pfam PF05170 AsmA family 3 503 1.7E-26 T 15-10-2018 IPR007844 AsmA THII_1292 7529bb86cd38ecf80e66f4ac2e23656b 178 Pfam PF03029 Conserved hypothetical ATP binding protein 9 101 5.5E-6 T 15-10-2018 IPR004130 GPN-loop GTPase THII_1292 7529bb86cd38ecf80e66f4ac2e23656b 178 Gene3D G3DSA:3.40.50.300 1 176 1.2E-18 T 15-10-2018 THII_1292 7529bb86cd38ecf80e66f4ac2e23656b 178 SUPERFAMILY SSF52540 3 174 1.04E-19 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3746 32106f4ef99b94607298018c46dac434 472 SUPERFAMILY SSF51126 5 222 4.49E-5 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor THII_3846 c12e581895597287f4a4f23859c35cce 376 Gene3D G3DSA:3.40.50.300 105 207 1.3E-8 T 15-10-2018 THII_3846 c12e581895597287f4a4f23859c35cce 376 SUPERFAMILY SSF52540 101 355 5.96E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_0115 781ec9b43a102db3b71d87026611b4ab 351 SUPERFAMILY SSF53300 10 187 3.64E-5 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_0115 781ec9b43a102db3b71d87026611b4ab 351 Gene3D G3DSA:3.40.50.410 6 206 3.7E-6 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily THII_2705 6a73f17b2ffef40be59a12a8bed2d843 127 SUPERFAMILY SSF158682 6 106 3.14E-8 T 15-10-2018 IPR029024 TerB-like THII_3644 97696a4ce4def49a3c70c81a3bb6c63f 84 Gene3D G3DSA:3.80.10.10 47 83 1.9E-5 T 15-10-2018 IPR032675 Leucine-rich repeat domain superfamily THII_2759 a067a2a2aa69bae9a5f1f850c080c5ce 124 Pfam PF13453 Transcription factor zinc-finger 67 108 1.2E-8 T 15-10-2018 IPR027392 Transcription factor zinc-finger THII_2759 a067a2a2aa69bae9a5f1f850c080c5ce 124 Pfam PF13453 Transcription factor zinc-finger 2 39 7.3E-13 T 15-10-2018 IPR027392 Transcription factor zinc-finger THII_1684 e0445da0de5f660dfcc4dfb54e745e0b 1001 Gene3D G3DSA:2.60.40.10 1 105 4.5E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_2824 0a9708384f04e331234485536bb53a5b 418 Pfam PF04922 DIE2/ALG10 family 31 185 2.8E-16 T 15-10-2018 IPR016900 Alpha-2-glucosyltransferase Alg10 GO:0004583|GO:0005789|GO:0006488 KEGG: 00510+2.4.1.256|Reactome: R-HSA-446193 THII_0909 c3aa860a129b5b2ccb9f63c62a05e27a 288 Pfam PF05685 Putative restriction endonuclease 27 202 6.0E-21 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_0056 550ee5506008da06242aa09a99e2bb24 345 SUPERFAMILY SSF88713 56 307 6.45E-40 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 THII_0056 550ee5506008da06242aa09a99e2bb24 345 Pfam PF01522 Polysaccharide deacetylase 91 293 1.4E-29 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 THII_1134 84c56ef580b28b2a61470e133136663b 248 Gene3D G3DSA:1.20.120.1630 77 241 2.2E-7 T 15-10-2018 THII_0222 1242629e34527e7b3d54dffc662a522d 155 Pfam PF01724 Domain of unknown function DUF29 7 151 4.2E-48 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0222 1242629e34527e7b3d54dffc662a522d 155 Gene3D G3DSA:1.20.1220.20 2 154 1.1E-24 T 15-10-2018 THII_1450 389b3f93fcbb9f925697f9b2ec4f98dc 496 SUPERFAMILY SSF54909 29 494 2.28E-82 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel THII_2642 870b247d9d182dc158a5a48e478bf7c6 109 SUPERFAMILY SSF143011 4 83 4.32E-8 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THII_1933 908ad88a2479b23063ac4554f813378f 715 Gene3D G3DSA:2.60.40.10 349 449 1.3E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3245 e1ed8eaea14c6c14b2e0af6c068aef28 256 Pfam PF04366 Las17-binding protein actin regulator 130 247 1.5E-28 T 15-10-2018 IPR007461 Ysc84 actin-binding domain THII_3645 e38c029c2783cc49bbc0d48e7677d481 246 Gene3D G3DSA:2.60.40.10 41 145 7.7E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_1437 3d2b637e6a6e909e7206a5f108228f35 486 SUPERFAMILY SSF48695 205 414 1.9E-12 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily THII_0531 746bc1747d5a398693d26a61670a0b05 86 Pfam PF10049 Protein of unknown function (DUF2283) 2 50 1.0E-14 T 15-10-2018 IPR019270 Protein of unknown function DUF2283 THII_2826 17e8b84639a15ed18e8e69250202c626 247 Pfam PF08241 Methyltransferase domain 74 125 3.9E-9 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 THII_2826 17e8b84639a15ed18e8e69250202c626 247 Gene3D G3DSA:3.40.50.150 8 192 6.5E-15 T 15-10-2018 THII_2826 17e8b84639a15ed18e8e69250202c626 247 SUPERFAMILY SSF53335 75 216 1.82E-16 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_3317 e4f326e99219ad47b60c3a66440d2c51 146 Gene3D G3DSA:1.20.1220.20 2 145 9.2E-30 T 15-10-2018 THII_3317 e4f326e99219ad47b60c3a66440d2c51 146 Pfam PF01724 Domain of unknown function DUF29 7 143 1.2E-46 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_0224 6445f543866f0fdd0056dd67b2d4313b 105 Pfam PF10053 Uncharacterized conserved protein (DUF2290) 31 99 5.0E-12 T 15-10-2018 IPR018742 Protein of unknown function DUF2290 THII_3265 a546ced756b3c3a77853cafd18cbbe03 144 SUPERFAMILY SSF102712 2 124 1.31E-24 T 15-10-2018 THII_3265 a546ced756b3c3a77853cafd18cbbe03 144 Pfam PF14464 Prokaryotic homologs of the JAB domain 9 109 7.1E-16 T 15-10-2018 IPR028090 JAB domain, prokaryotic THII_3265 a546ced756b3c3a77853cafd18cbbe03 144 Gene3D G3DSA:3.40.140.10 3 138 1.4E-28 T 15-10-2018 THII_2007 d830aa5095d2179169ad9e51fd797392 58 SUPERFAMILY SSF88723 5 51 2.72E-5 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_1764 28fcd57f6950acdcf00f95a49fdc9493 465 Gene3D G3DSA:3.40.50.300 1 175 4.6E-12 T 15-10-2018 THII_1764 28fcd57f6950acdcf00f95a49fdc9493 465 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 386 5.9E-33 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 THII_1764 28fcd57f6950acdcf00f95a49fdc9493 465 SUPERFAMILY SSF52540 1 387 1.87E-22 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_1764 28fcd57f6950acdcf00f95a49fdc9493 465 Gene3D G3DSA:3.40.50.300 187 456 3.0E-11 T 15-10-2018 THII_1428 33e1c99ed65e5a9994129613bfa6e2af 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 135 6.1E-26 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 THII_3605 1594ec063920cc681ecb4777b8e9303f 347 Pfam PF14281 PD-(D/E)XK nuclease superfamily 40 145 2.7E-7 T 15-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 THII_2101 dfc515eb95499233bedc646d660ab8b6 126 Pfam PF13711 Domain of unknown function (DUF4160) 48 111 3.3E-17 T 15-10-2018 IPR025427 Protein of unknown function DUF4160 THII_2758 8542a094d57f060d4a38da3e25b48626 390 Pfam PF05940 NnrS protein 1 384 1.6E-57 T 15-10-2018 IPR010266 NnrS THII_0922 c3ca9af6bef1ef8adc25914dd19117be 162 Gene3D G3DSA:2.170.150.20 60 162 1.4E-29 T 15-10-2018 THII_0761 a34bff8812f5f45c321997bcf018a3d0 462 Pfam PF09913 Predicted membrane protein (DUF2142) 16 416 1.2E-82 T 15-10-2018 IPR018674 Protein of unknown function DUF2142, membrane THII_3452 02921301e8430aa165c58e1a6e2abc6a 160 SUPERFAMILY SSF52980 21 152 2.04E-14 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3452 02921301e8430aa165c58e1a6e2abc6a 160 Pfam PF05685 Putative restriction endonuclease 20 134 6.7E-11 T 15-10-2018 IPR008538 Domain of unknown function DUF820 THII_3452 02921301e8430aa165c58e1a6e2abc6a 160 Gene3D G3DSA:3.90.1570.10 17 157 2.1E-18 T 15-10-2018 THII_2857 48832c809ae3d0158c1d4061910ed204 80 Pfam PF16277 Domain of unknown function (DUF4926) 5 64 9.9E-14 T 15-10-2018 IPR032568 Protein of unknown function DUF4926 THII_0112 c144f2be753a30924767c9085627e5a1 281 Gene3D G3DSA:2.60.120.380 29 181 3.8E-11 T 15-10-2018 THII_0112 c144f2be753a30924767c9085627e5a1 281 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 79 150 1.1E-8 T 15-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial THII_2835 76047d997b6aaafcb551348cf829a42d 326 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 8 299 7.0E-42 T 15-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD THII_2835 76047d997b6aaafcb551348cf829a42d 326 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 13 317 3.5E-24 T 15-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD THII_0591 f74f8a8afccba0b458402347e2a431d8 1000 SUPERFAMILY SSF50969 613 779 1.02E-14 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like THII_0995 1cfab608c8985f46ce21c3618015f3ff 321 Pfam PF13665 Domain of unknown function (DUF4150) 21 134 3.3E-39 T 15-10-2018 IPR025425 Domain of unknown function DUF4150 THII_1282 04e5872c4023dc06e356731f75b322fc 160 Gene3D G3DSA:2.40.50.180 28 115 1.1E-6 T 15-10-2018 THII_1282 04e5872c4023dc06e356731f75b322fc 160 SUPERFAMILY SSF50341 8 145 5.1E-13 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 THII_1282 04e5872c4023dc06e356731f75b322fc 160 Pfam PF01584 CheW-like domain 9 107 8.4E-10 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 THII_0118 7fe28beeb742e6a14b18a64af828b2c0 145 Pfam PF01493 GXGXG motif 1 53 1.1E-18 T 15-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 THII_0118 7fe28beeb742e6a14b18a64af828b2c0 145 Gene3D G3DSA:2.160.20.60 1 136 9.2E-31 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 THII_0118 7fe28beeb742e6a14b18a64af828b2c0 145 SUPERFAMILY SSF69336 1 126 5.49E-27 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 THII_2354 63687f28b1efd6ecc840fa419f68a14a 242 Pfam PF06051 Domain of Unknown Function (DUF928) 49 241 2.1E-34 T 15-10-2018 IPR010328 Protein of unknown function DUF928 THII_2641 1c66466f8549793c8333c8da06830c1d 424 SUPERFAMILY SSF53756 88 420 6.98E-60 T 15-10-2018 THII_2641 1c66466f8549793c8333c8da06830c1d 424 Gene3D G3DSA:3.40.50.2000 218 397 2.6E-48 T 15-10-2018 THII_2641 1c66466f8549793c8333c8da06830c1d 424 Gene3D G3DSA:3.40.50.2000 104 414 2.6E-48 T 15-10-2018 THII_2641 1c66466f8549793c8333c8da06830c1d 424 Pfam PF00534 Glycosyl transferases group 1 238 379 1.0E-31 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 THII_2472 354d383bac8487b08a9d4a0b321c070a 140 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 7 138 5.6E-32 T 15-10-2018 IPR019231 Protein of unknown function DUF2170 THII_2902 6d4789443c99785cb6bbdb11c52ae1d4 322 Pfam PF01925 Sulfite exporter TauE/SafE 40 278 1.2E-22 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 THII_0139 bf7c8bb5154bc264920a96635e03cda0 405 Pfam PF12704 MacB-like periplasmic core domain 18 242 3.1E-10 T 15-10-2018 IPR025857 MacB-like periplasmic core domain THII_0139 bf7c8bb5154bc264920a96635e03cda0 405 Pfam PF02687 FtsX-like permease family 298 395 3.9E-10 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 THII_1591 d536c8c59c26165b8914c5ba8637b3c8 140 Pfam PF01724 Domain of unknown function DUF29 22 124 1.4E-7 T 15-10-2018 IPR002636 Protein from unkown function DUF29 THII_2336 ff204932805d9406bda7c8ef6054624f 314 SUPERFAMILY SSF50965 79 298 1.26E-5 T 15-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller THII_3875 b231bc5b0fdbe64d97550e6fe8d9d477 341 SUPERFAMILY SSF52980 95 326 5.9E-23 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_0219 a58b628adf6b20f792ab2063f19db6ce 190 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 190 3.1E-41 T 15-10-2018 IPR018636 Protein of unknown function DUF2058 THII_2460 037ec64305306125e4397c298dfc7795 219 SUPERFAMILY SSF103501 9 209 8.37E-32 T 15-10-2018 IPR036197 NarG-like superfamily THII_1447 8d2277a48c4d11fdee7411bf2c4674d4 1083 Pfam PF09826 Beta propeller domain 205 644 1.4E-52 T 15-10-2018 IPR019198 Beta propeller domain-containing family THII_1265 7f7454065f0102ac0f8e0afa1727e990 205 SUPERFAMILY SSF53335 70 202 1.3E-12 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THII_1265 7f7454065f0102ac0f8e0afa1727e990 205 Gene3D G3DSA:3.40.50.150 15 204 2.4E-10 T 15-10-2018 THII_1265 7f7454065f0102ac0f8e0afa1727e990 205 Pfam PF08241 Methyltransferase domain 66 119 8.1E-8 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 THII_0367 6da8979dec0045727748e13ffe182018 238 SUPERFAMILY SSF52317 4 230 9.59E-47 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_0367 6da8979dec0045727748e13ffe182018 238 Pfam PF00117 Glutamine amidotransferase class-I 23 180 4.0E-17 T 15-10-2018 IPR017926 Glutamine amidotransferase THII_0367 6da8979dec0045727748e13ffe182018 238 Gene3D G3DSA:3.40.50.880 1 231 6.7E-54 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like THII_2039 de31bedce098eac38acbb237c081a0c1 75 Pfam PF13711 Domain of unknown function (DUF4160) 9 71 6.5E-18 T 15-10-2018 IPR025427 Protein of unknown function DUF4160 THII_3083 d18997e8caeb8b89dc4e002068355009 60 Gene3D G3DSA:3.30.450.150 17 59 2.1E-5 T 15-10-2018 IPR038084 GlcG-like domain superfamily THII_0210 4c4fe10ca5e3284e140068bdc620b1af 235 Gene3D G3DSA:3.30.450.40 48 231 1.2E-46 T 15-10-2018 IPR029016 GAF-like domain superfamily THII_0210 4c4fe10ca5e3284e140068bdc620b1af 235 Pfam PF04340 Protein of unknown function, DUF484 12 228 3.0E-48 T 15-10-2018 IPR007435 Protein of unknown function DUF484 THII_0210 4c4fe10ca5e3284e140068bdc620b1af 235 SUPERFAMILY SSF55781 67 225 5.59E-5 T 15-10-2018 THII_2280 1cf0457ec35643e45409c2830531d7a1 298 Pfam PF02754 Cysteine-rich domain 5 89 1.4E-7 T 15-10-2018 IPR004017 Cysteine-rich domain THII_2280 1cf0457ec35643e45409c2830531d7a1 298 Pfam PF02754 Cysteine-rich domain 156 242 1.6E-12 T 15-10-2018 IPR004017 Cysteine-rich domain THII_3301 fce64287833e37b5f1954adbea3f03f8 408 Pfam PF09594 Glycosyltransferase family 87 85 296 2.2E-18 T 15-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 THII_3929 02d458ff9bef301c6f86312b1d85364f 227 Pfam PF05137 Fimbrial assembly protein (PilN) 100 182 2.2E-22 T 15-10-2018 IPR007813 Fimbrial assembly PilN THII_3776 83ca294e1608d82318546e05f5ccf6fc 156 Pfam PF11159 Protein of unknown function (DUF2939) 9 85 3.0E-11 T 15-10-2018 IPR021330 Protein of unknown function DUF2939 THII_1966 45aab672ba3d5df9813bdb9186dcfe0c 318 Pfam PF14238 Domain of unknown function (DUF4340) 69 231 7.1E-12 T 15-10-2018 IPR025641 Domain of unknown function DUF4340 THII_2798 9231c8c5762e18369f112e1754ce11e8 227 Pfam PF03567 Sulfotransferase family 3 216 3.6E-11 T 15-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 THII_2798 9231c8c5762e18369f112e1754ce11e8 227 SUPERFAMILY SSF52540 82 219 2.25E-7 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase THII_3333 c31cd6486bc7d988d3d8fc3ce2af9bfb 1593 Gene3D G3DSA:2.60.40.10 640 740 9.6E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3333 c31cd6486bc7d988d3d8fc3ce2af9bfb 1593 Gene3D G3DSA:2.60.40.10 215 298 1.4E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3333 c31cd6486bc7d988d3d8fc3ce2af9bfb 1593 Gene3D G3DSA:2.60.40.10 521 611 4.2E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3333 c31cd6486bc7d988d3d8fc3ce2af9bfb 1593 Gene3D G3DSA:2.60.40.10 1289 1400 1.1E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold THII_3333 c31cd6486bc7d988d3d8fc3ce2af9bfb 1593 Pfam PF07610 Protein of unknown function (DUF1573) 647 732 2.4E-4 T 15-10-2018 IPR011467 Protein of unknown function DUF1573 THII_3333 c31cd6486bc7d988d3d8fc3ce2af9bfb 1593 Pfam PF07610 Protein of unknown function (DUF1573) 1298 1394 3.8E-5 T 15-10-2018 IPR011467 Protein of unknown function DUF1573 THII_3425 c5361dd6b86578011e50b145759ee4d0 134 SUPERFAMILY SSF103196 2 130 4.45E-6 T 15-10-2018 THII_2526 a3acfeb15d8719f8535b235919040da8 78 Pfam PF10047 Protein of unknown function (DUF2281) 6 70 2.2E-13 T 15-10-2018 IPR018739 Domain of unknown function DUF2281 THII_1622 e8794b0d10b447391c9f94d8880cca3c 221 SUPERFAMILY SSF52980 16 105 8.71E-5 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 THII_3007 6513a60152a3835d63325b2d8df50c90 53 Pfam PF04255 Protein of unknown function (DUF433) 13 41 2.2E-5 T 15-10-2018 IPR007367 Protein of unknown function DUF433 THII_2674 6f22ef7841042602dcc8e149debec54b 281 TIGRFAM TIGR04222 near_uncomplex: TIGR04222 domain 19 248 7.8E-29 T 15-10-2018 IPR026467 Ser/Gly rich, Cys interspersed, C-terminal domain THII_2063 a18276e3ac7516f55bb22c2ccb8d01c3 132 Pfam PF13682 Chemoreceptor zinc-binding domain 27 95 7.0E-13 T 15-10-2018 IPR025991 Chemoreceptor zinc-binding domain THII_2015 1ae168b69587b88da287b475edc0371a 286 SUPERFAMILY SSF69255 17 96 1.7E-15 T 15-10-2018 THII_2577 7fdb219112e848276f1fddf637215f7c 548 SUPERFAMILY SSF75011 63 354 2.48E-13 T 15-10-2018 THII_0122 7cc704434831307d2228bd7b138642f4 433 Pfam PF04235 Protein of unknown function (DUF418) 262 426 4.5E-49 T 15-10-2018 IPR007349 Domain of unknown function DUF418 THII_2743 6493ec92763172613004dbbf593ece36 94 SUPERFAMILY SSF88723 3 93 3.14E-7 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2878 84d1a0e9d0967479edeb30f9ddad5efc 170 Gene3D G3DSA:3.30.70.3460 83 170 5.2E-19 T 15-10-2018 THII_1678 6c2ce6e0324a82f55d69a6ea4f46a43d 178 ProDom PD065237 RESTRICTION MA4585 ORF11 MM1264 PRECURSOR HGICIIM SYSTEM 5'REGION SIGNAL SIMILAR 74 172 1.0E-7 T 15-10-2018 IPR020391 Uncharacterised protein family 10.2kDa THII_0692 9565171a16c7b7194a31fe2ba3e0f032 430 PIRSF PIRSF019435 1 422 3.4E-86 T 15-10-2018 IPR008508 Protein of unknown function DUF790, endonuclease-like THII_0692 9565171a16c7b7194a31fe2ba3e0f032 430 Pfam PF05626 Protein of unknown function (DUF790) 1 399 9.1E-103 T 15-10-2018 IPR008508 Protein of unknown function DUF790, endonuclease-like THII_2096 e4a740f0d2894f94b342d4ce14f044d5 85 Gene3D G3DSA:3.40.50.1010 2 84 5.1E-8 T 15-10-2018 THII_2096 e4a740f0d2894f94b342d4ce14f044d5 85 SUPERFAMILY SSF88723 5 77 5.89E-8 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_3117 16e0eabe5e71cc885b563f3a7da56ddb 150 Pfam PF13358 DDE superfamily endonuclease 16 103 7.6E-9 T 15-10-2018 IPR038717 Tc1-like transposase, DDE domain THII_1017 1c9977f76a454ee7750abbce7ded228c 524 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 107 217 1.5E-8 T 15-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 THII_1609 43f5b71cb9f2b3cdb4626e7c6e23518a 57 Pfam PF08410 Domain of unknown function (DUF1737) 6 46 8.3E-7 T 15-10-2018 IPR013619 Domain of unknown function DUF1737 THII_1086 6975a92fd05d2c2fb66d6c381170d90b 68 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 2 43 1.8E-8 T 15-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB THII_0800 cd7803721e831c78d16738ecd2f6611d 378 Pfam PF10082 Putative beta-barrel porin 2 17 376 8.2E-27 T 15-10-2018 IPR018759 Putative beta-barrel porin 2 THII_2992 af269af37ac77a1c111ef0a2a5c10c5a 409 ProDom PD065237 RESTRICTION MA4585 ORF11 MM1264 PRECURSOR HGICIIM SYSTEM 5'REGION SIGNAL SIMILAR 308 402 4.0E-11 T 15-10-2018 IPR020391 Uncharacterised protein family 10.2kDa THII_2992 af269af37ac77a1c111ef0a2a5c10c5a 409 ProDom PD065237 RESTRICTION MA4585 ORF11 MM1264 PRECURSOR HGICIIM SYSTEM 5'REGION SIGNAL SIMILAR 203 297 1.0E-18 T 15-10-2018 IPR020391 Uncharacterised protein family 10.2kDa THII_0015 14534a23d8c6df5a2cdae89bc4f70f0b 334 Pfam PF14261 Domain of unknown function (DUF4351) 271 323 6.7E-7 T 15-10-2018 IPR025587 Domain of unknown function DUF4351 THII_0015 14534a23d8c6df5a2cdae89bc4f70f0b 334 Pfam PF04754 Putative transposase, YhgA-like 5 177 2.2E-34 T 15-10-2018 IPR006842 Transposase (putative), YhgA-like THII_0833 2e13847108ae54b94106218c360d80db 292 Pfam PF03692 Putative zinc- or iron-chelating domain 30 133 4.3E-10 T 15-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein THII_2540 72826679b567d3e21c1e082482d48cc9 103 Pfam PF05258 Protein of unknown function (DUF721) 14 89 9.7E-15 T 15-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 THII_2773 8f29401ff2edc26860be2ac9150d446e 182 Pfam PF05128 Domain of unknown function (DUF697) 25 152 2.5E-10 T 15-10-2018 IPR021147 Protein of unknown function DUF697 THII_0725 d898823bdc40f49176673e654fbb74ce 512 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 62 221 2.4E-8 T 15-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like THII_0997 328615c857c01aeeb403ee438cc7d5ff 371 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 20 317 4.4E-96 T 15-10-2018 IPR018683 Domain of unknown function DUF2169 THII_3294 54c56c71b74aeb2972522c9cc8394efa 363 Pfam PF13665 Domain of unknown function (DUF4150) 15 116 4.5E-25 T 15-10-2018 IPR025425 Domain of unknown function DUF4150 THII_1274 42b0facc5ab1bc20207382800dc4b662 207 Pfam PF03412 Peptidase C39 family 74 185 1.3E-9 T 15-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 THII_1274 42b0facc5ab1bc20207382800dc4b662 207 Gene3D G3DSA:3.90.70.10 70 206 2.9E-9 T 15-10-2018 THII_2690 2d96e1e6598cc22d0a4e1e85d973ce76 149 Pfam PF14085 Domain of unknown function (DUF4265) 18 130 1.3E-31 T 15-10-2018 IPR025361 Protein of unknown function DUF4265 THII_1628 cdfda39066bbee80faaf91bbda7ea8d1 222 Gene3D G3DSA:1.20.120.20 69 216 3.3E-6 T 15-10-2018 THII_0007 9d5f02ec421c9400d17cf395a837f531 66 SUPERFAMILY SSF88723 1 53 1.26E-6 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_2186 6541a8c0f869793a24ce35d53a1f5c5b 304 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 248 2.3E-44 T 15-10-2018 IPR010106 Recombination-promoting nuclease RpnA THII_2186 6541a8c0f869793a24ce35d53a1f5c5b 304 Pfam PF12784 PD-(D/E)XK nuclease family transposase 6 234 4.1E-66 T 15-10-2018 THII_0123 a7b0f915098002def5154c210df401bd 302 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 156 249 5.5E-18 T 15-10-2018 IPR029095 NarX-like, N-terminal THII_0123 a7b0f915098002def5154c210df401bd 302 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 125 4.1E-17 T 15-10-2018 IPR029095 NarX-like, N-terminal THII_2372 449c3183c6a571987be35563f20170eb 227 SUPERFAMILY SSF56935 26 222 2.52E-5 T 15-10-2018 THII_1667 a51f25950b030c3d1c40a89d0450f55e 273 SUPERFAMILY SSF46458 141 271 4.52E-5 T 15-10-2018 IPR009050 Globin-like superfamily THII_1549 fa0ae370e12cd632dd7a58a0c5043bb9 330 Pfam PF00146 NADH dehydrogenase 23 314 6.6E-38 T 15-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_0965 89f56071eb24bcf071804b464fd13960 145 Gene3D G3DSA:2.40.128.520 24 145 4.8E-20 T 15-10-2018 THII_0965 89f56071eb24bcf071804b464fd13960 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 29 143 5.4E-33 T 15-10-2018 IPR019223 Domain of unknown function DUF2147 THII_3537 dea376e324fa9d62a44ca30020782981 286 Pfam PF04228 Putative neutral zinc metallopeptidase 1 281 3.0E-122 T 15-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative THII_3578 db0703c2d2ef4f00f2c9bd0f4573f790 232 Gene3D G3DSA:3.40.50.2020 8 203 5.3E-6 T 15-10-2018 THII_3251 9f21211017b82bc46eecff27fd7ad01d 153 Gene3D G3DSA:1.10.8.640 21 107 6.8E-34 T 15-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily THII_3251 9f21211017b82bc46eecff27fd7ad01d 153 Pfam PF03918 Cytochrome C biogenesis protein 11 151 5.9E-52 T 15-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family THII_0942 20df7c23ba8162cd46c02ce03c896a5d 272 Pfam PF07819 PGAP1-like protein 91 146 2.8E-9 T 15-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 THII_0942 20df7c23ba8162cd46c02ce03c896a5d 272 SUPERFAMILY SSF53474 23 224 1.36E-23 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold THII_0398 809e5cc1f3c0cc8b675f4f95912284bd 107 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 97 1.7E-19 T 15-10-2018 IPR009241 Toxin HigB-like THII_0755 41b5ad5001252b3a963a8f7f92d39aab 154 Pfam PF16998 17 kDa outer membrane surface antigen 71 152 1.3E-9 T 15-10-2018 IPR032635 Surface antigen domain THII_0755 41b5ad5001252b3a963a8f7f92d39aab 154 PIRSF PIRSF002721 1 154 1.6E-41 T 15-10-2018 IPR016364 Surface antigen, Rickettsia type THII_1227 f987cffe5475640c9d323a7d3799e6a4 540 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 196 1.2E-12 T 15-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like THII_2495 8b5d717314a73c3de895624c78dbfff0 133 Pfam PF16137 Domain of unknown function (DUF4845) 32 126 2.4E-9 T 15-10-2018 IPR032314 Protein of unknown function DUF4845 THII_2852 09bc7a88081eb72f27259adf89de2f5f 246 Pfam PF06271 RDD family 21 143 4.4E-17 T 15-10-2018 IPR010432 RDD THII_1548 50d3ed3a48b066f2101a431b093f2413 674 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 173 197 2.0E-8 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1548 50d3ed3a48b066f2101a431b093f2413 674 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 242 266 2.0E-8 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1548 50d3ed3a48b066f2101a431b093f2413 674 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 393 419 2.0E-8 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1548 50d3ed3a48b066f2101a431b093f2413 674 Pfam PF00361 Proton-conducting membrane transporter 136 423 9.1E-60 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 THII_1509 1d5cfe29f55f962e4806fe21515f8ce9 321 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 310 2.7E-88 T 15-10-2018 IPR007296 Domain of unknown function DUF403 THII_1059 38ff9e7677bacf22f325fde98148f894 355 Pfam PF04754 Putative transposase, YhgA-like 4 203 1.1E-29 T 15-10-2018 IPR006842 Transposase (putative), YhgA-like THII_0109 bc58e9d9bea91536a6cbaa418bad75aa 238 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 10 217 1.1E-52 T 15-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain THII_3824 fa2ec9ca93e6c6aeabbf0a7a3de22ec1 136 Pfam PF04519 Polymer-forming cytoskeletal 14 114 5.2E-26 T 15-10-2018 IPR007607 Bactofilin A/B THII_1335 4242ac4bb09199a7290966533a5cd397 233 Pfam PF04366 Las17-binding protein actin regulator 110 229 6.9E-25 T 15-10-2018 IPR007461 Ysc84 actin-binding domain THII_3714 9430c60fa4b33a1be3d1e0a466a7f0ac 400 Pfam PF13609 Gram-negative porin 9 385 6.6E-38 T 15-10-2018 THII_3714 9430c60fa4b33a1be3d1e0a466a7f0ac 400 SUPERFAMILY SSF56935 19 400 9.46E-25 T 15-10-2018 THII_2475 5afaf995bd7374e442db6e8d4ccf97c6 129 Pfam PF02397 Bacterial sugar transferase 28 129 2.3E-33 T 15-10-2018 IPR003362 Bacterial sugar transferase THII_2155 aefeb0276ca08929ead6e27fe533b4d8 333 Pfam PF09925 Predicted membrane protein (DUF2157) 46 158 3.3E-23 T 15-10-2018 IPR018677 Domain of unknown function DUF2157 THII_0697 f6c65d093f365d5df5541a39476bbb76 344 TIGRFAM TIGR03187 DGQHR: DGQHR domain 8 274 2.5E-33 T 15-10-2018 IPR017601 DGQHR-containing domain THII_0697 f6c65d093f365d5df5541a39476bbb76 344 Pfam PF14072 DNA-sulfur modification-associated 8 268 3.4E-20 T 15-10-2018 IPR017642 DNA sulphur modification protein DndB THII_2198 b8c5052b1b4f9262fc1908e93f91e085 105 Pfam PF01710 Transposase 19 104 2.3E-6 T 15-10-2018 IPR002622 Transposase, Synechocystis PCC 6803 THII_1009 2edf2aca7296099189d90502da189270 1554 Pfam PF14331 ImcF-related N-terminal domain 172 429 7.9E-53 T 15-10-2018 IPR025743 ImcF-related, N-terminal domain THII_2921 502d6eb8af8caaedf9a9dd7eee4a4643 94 Pfam PF14076 Domain of unknown function (DUF4258) 8 78 7.4E-15 T 15-10-2018 IPR025354 Protein of unknown function DUF4258 THII_1620 4421080df6cad1f2c086936f6120af14 60 Pfam PF04328 Selenoprotein, putative 2 60 1.1E-21 T 15-10-2018 IPR007423 Selenoprotein, putative THII_2696 d6d5dcb3b44c8b7d406b437f5abca189 244 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 42 237 1.3E-38 T 15-10-2018 IPR006214 Bax inhibitor 1-related THII_2993 a0d441f654a79e07b603f7bad411b145 234 Pfam PF03050 Transposase IS66 family 30 196 4.8E-17 T 15-10-2018 IPR004291 Transposase, IS66 THII_2579 67831808f31caeff2004158ca0fa282c 202 Pfam PF14334 Domain of unknown function (DUF4390) 36 190 3.3E-44 T 15-10-2018 IPR025500 Protein of unknown function DUF4390 THII_2402 e1b4238ce900d9c1bf78b73a1c495623 109 Pfam PF03400 IS1 transposase 5 95 5.7E-8 T 15-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 THII_2030 0f02aaa6aa3abd52fce8983939d700b5 120 Pfam PF01927 Mut7-C RNAse domain 2 96 1.8E-5 T 15-10-2018 IPR002782 Mut7-C RNAse domain THII_0504 87442af46d06f6d2bae5f24ab4662172 588 Pfam PF05787 Bacterial protein of unknown function (DUF839) 148 517 1.2E-21 T 15-10-2018 IPR008557 Protein of unknown function DUF839 THII_1732 5fca2f69fddcc652d52324f1a57c895b 92 SUPERFAMILY SSF88723 50 86 7.85E-6 T 15-10-2018 IPR029060 PIN-like domain superfamily THII_1295 75ddc9120d6ca0f1bf7e66d2438dd6e3 173 Pfam PF02674 Colicin V production protein 5 139 5.7E-25 T 15-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 THII_2211 7848524d1dd78c5ef89bf2f44b41a6b8 138 Pfam PF13808 DDE_Tnp_1-associated 28 113 1.7E-31 T 15-10-2018 IPR032806 H repeat-associated protein, N-terminal THII_2095 db96174bfa74a08ff58d1be3abef8d05 76 SUPERFAMILY SSF47598 2 40 4.13E-5 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 THII_1968 2d23a92dcc8b77bb359b7d1f07dd4d91 249 Pfam PF12679 ABC-2 family transporter protein 2 240 5.4E-12 T 15-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 THII_2906 856e348abd321cd140fc4311e96da90d 335 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 111 198 1.5E-22 T 15-10-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein THII_1660 d187e6aed4b45c15df88e484d4a2b91b 411 Pfam PF14238 Domain of unknown function (DUF4340) 70 255 3.6E-18 T 15-10-2018 IPR025641 Domain of unknown function DUF4340 THII_1002 e0d6239cd1276b34625d1fca1df1f184 97 Pfam PF03811 InsA N-terminal domain 2 29 3.8E-7 T 15-10-2018 IPR003220 InsA N-terminal domain GO:0006313 THII_2456 2c07dc8e3fabd86fe83aee1101fab2cd 161 Gene3D G3DSA:3.30.700.10 10 161 5.2E-11 T 15-10-2018