locus-tag class description AKN87_00010 PF02674 Colicin V production protein AKN87_00015 PF00156 Phosphoribosyl transferase domain AKN87_00020 PF01053 Cys/Met metabolism PLP-dependent enzyme AKN87_00025 PF08411 Exonuclease C-terminal AKN87_00025 PF00929 Exonuclease AKN87_00035 PF06969 HemN C-terminal domain AKN87_00035 PF04055 Radical SAM superfamily AKN87_00040 PF13091 PLD-like domain AKN87_00045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKN87_00045 PF05698 Bacterial trigger factor protein (TF) C-terminus AKN87_00045 PF05697 Bacterial trigger factor protein (TF) AKN87_00050 PF00574 Clp protease AKN87_00055 PF07724 AAA domain (Cdc48 subfamily) AKN87_00055 PF10431 C-terminal, D2-small domain, of ClpB protein AKN87_00055 PF06689 ClpX C4-type zinc finger AKN87_00060 PF02190 ATP-dependent protease La (LON) substrate-binding domain AKN87_00060 PF05362 Lon protease (S16) C-terminal proteolytic domain AKN87_00060 PF00004 ATPase family associated with various cellular activities (AAA) AKN87_00065 PF00216 Bacterial DNA-binding protein AKN87_00070 PF13145 PPIC-type PPIASE domain AKN87_00075 PF06794 Uncharacterised protein family (UPF0270) AKN87_00080 PF03358 NADPH-dependent FMN reductase AKN87_00085 PF13726 Na+-H+ antiporter family AKN87_00085 PF03553 Na+/H+ antiporter family AKN87_00090 PF04261 Dyp-type peroxidase family AKN87_00095 PF01668 SmpB protein AKN87_00100 PF03364 Polyketide cyclase / dehydrase and lipid transport AKN87_00105 PF03658 RnfH family Ubiquitin AKN87_00110 PF04355 SmpA / OmlA family AKN87_00115 PF01475 Ferric uptake regulator family AKN87_00120 PF03976 Polyphosphate kinase 2 (PPK2) AKN87_00125 PF04245 37-kD nucleoid-associated bacterial protein AKN87_00130 PF01205 Uncharacterized protein family UPF0029 AKN87_00140 PF04320 Protein with unknown function (DUF469) AKN87_00150 PF00296 Luciferase-like monooxygenase AKN87_00160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN87_00160 PF13360 PQQ-like domain AKN87_00165 PF00156 Phosphoribosyl transferase domain AKN87_00180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AKN87_00180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AKN87_00185 PF01261 Xylose isomerase-like TIM barrel AKN87_00190 PF01027 Inhibitor of apoptosis-promoting Bax1 AKN87_00205 PF00202 Aminotransferase class-III AKN87_00210 PF02581 Thiamine monophosphate synthase AKN87_00215 PF08543 Phosphomethylpyrimidine kinase AKN87_00230 PF08264 Anticodon-binding domain of tRNA AKN87_00230 PF00133 tRNA synthetases class I (I, L, M and V) AKN87_00230 PF13603 Leucyl-tRNA synthetase, Domain 2 AKN87_00230 PF09334 tRNA synthetases class I (M) AKN87_00240 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AKN87_00240 PF01266 FAD dependent oxidoreductase AKN87_00245 PF07729 FCD domain AKN87_00245 PF00392 Bacterial regulatory proteins, gntR family AKN87_00250 PF06470 SMC proteins Flexible Hinge Domain AKN87_00250 PF02463 RecF/RecN/SMC N terminal domain AKN87_00255 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AKN87_00260 PF02464 Competence-damaged protein AKN87_00265 PF00154 recA bacterial DNA recombination protein AKN87_00270 PF02631 RecX family AKN87_00285 PF00270 DEAD/DEAH box helicase AKN87_00285 PF00271 Helicase conserved C-terminal domain AKN87_00300 PF02381 MraZ protein, putative antitoxin-like AKN87_00305 PF01795 MraW methylase family AKN87_00310 PF04999 Cell division protein FtsL AKN87_00315 PF03717 Penicillin-binding Protein dimerisation domain AKN87_00315 PF00905 Penicillin binding protein transpeptidase domain AKN87_00320 PF08245 Mur ligase middle domain AKN87_00320 PF02875 Mur ligase family, glutamate ligase domain AKN87_00320 PF01225 Mur ligase family, catalytic domain AKN87_00325 PF01225 Mur ligase family, catalytic domain AKN87_00325 PF02875 Mur ligase family, glutamate ligase domain AKN87_00325 PF08245 Mur ligase middle domain AKN87_00330 PF00953 Glycosyl transferase family 4 AKN87_00330 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AKN87_00335 PF02875 Mur ligase family, glutamate ligase domain AKN87_00335 PF08245 Mur ligase middle domain AKN87_00340 PF01098 Cell cycle protein AKN87_00345 PF04101 Glycosyltransferase family 28 C-terminal domain AKN87_00345 PF03033 Glycosyltransferase family 28 N-terminal domain AKN87_00350 PF08245 Mur ligase middle domain AKN87_00350 PF01225 Mur ligase family, catalytic domain AKN87_00350 PF02875 Mur ligase family, glutamate ligase domain AKN87_00355 PF07478 D-ala D-ala ligase C-terminus AKN87_00355 PF01820 D-ala D-ala ligase N-terminus AKN87_00360 PF03799 Cell division protein FtsQ AKN87_00360 PF08478 POTRA domain, FtsQ-type AKN87_00365 PF02491 SHS2 domain inserted in FTSA AKN87_00370 PF12327 FtsZ family, C-terminal domain AKN87_00370 PF00091 Tubulin/FtsZ family, GTPase domain AKN87_00375 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AKN87_00385 PF02810 SEC-C motif AKN87_00385 PF07517 SecA DEAD-like domain AKN87_00385 PF01043 SecA preprotein cross-linking domain AKN87_00385 PF07516 SecA Wing and Scaffold domain AKN87_00390 PF01960 ArgJ family AKN87_00395 PF00293 NUDIX domain AKN87_00400 PF01923 Cobalamin adenosyltransferase AKN87_00405 PF02558 Ketopantoate reductase PanE/ApbA AKN87_00405 PF08546 Ketopantoate reductase PanE/ApbA C terminal AKN87_00410 PF04461 Protein of unknown function (DUF520) AKN87_00415 PF08459 UvrC Helix-hairpin-helix N-terminal AKN87_00415 PF02151 UvrB/uvrC motif AKN87_00415 PF01541 GIY-YIG catalytic domain AKN87_00425 PF17876 Cold shock domain AKN87_00425 PF08461 Ribonuclease R winged-helix domain AKN87_00425 PF08206 Ribonuclease B OB domain AKN87_00425 PF00773 RNB domain AKN87_00425 PF00575 S1 RNA binding domain AKN87_00430 PF00588 SpoU rRNA Methylase family AKN87_00430 PF08032 RNA 2'-O ribose methyltransferase substrate binding AKN87_00435 PF01250 Ribosomal protein S6 AKN87_00440 PF01084 Ribosomal protein S18 AKN87_00450 PF03948 Ribosomal protein L9, C-terminal domain AKN87_00450 PF01281 Ribosomal protein L9, N-terminal domain AKN87_00455 PF00772 DnaB-like helicase N terminal domain AKN87_00455 PF03796 DnaB-like helicase C terminal domain AKN87_00470 PF02844 Phosphoribosylglycinamide synthetase, N domain AKN87_00470 PF02843 Phosphoribosylglycinamide synthetase, C domain AKN87_00470 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AKN87_00475 PF01808 AICARFT/IMPCHase bienzyme AKN87_00475 PF02142 MGS-like domain AKN87_00480 PF02954 Bacterial regulatory protein, Fis family AKN87_00485 PF01207 Dihydrouridine synthase (Dus) AKN87_00505 PF02586 SOS response associated peptidase (SRAP) AKN87_00510 PF00381 PTS HPr component phosphorylation site AKN87_00515 PF03668 P-loop ATPase protein family AKN87_00520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AKN87_00525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AKN87_00530 PF04963 Sigma-54 factor, core binding domain AKN87_00530 PF00309 Sigma-54 factor, Activator interacting domain (AID) AKN87_00530 PF04552 Sigma-54, DNA binding domain AKN87_00545 PF13649 Methyltransferase domain AKN87_00555 PF04973 Nicotinamide mononucleotide transporter AKN87_00565 PF01047 MarR family AKN87_00575 PF03461 TRCF domain AKN87_00575 PF17757 UvrB interaction domain AKN87_00575 PF00271 Helicase conserved C-terminal domain AKN87_00575 PF00270 DEAD/DEAH box helicase AKN87_00575 PF02559 CarD-like/TRCF domain AKN87_00580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AKN87_00580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AKN87_00585 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AKN87_00585 PF11973 NQRA C-terminal domain AKN87_00590 PF03116 NQR2, RnfD, RnfE family AKN87_00595 PF04205 FMN-binding domain AKN87_00600 PF02508 Rnf-Nqr subunit, membrane protein AKN87_00605 PF02508 Rnf-Nqr subunit, membrane protein AKN87_00610 PF00175 Oxidoreductase NAD-binding domain AKN87_00610 PF00111 2Fe-2S iron-sulfur cluster binding domain AKN87_00610 PF00970 Oxidoreductase FAD-binding domain AKN87_00615 PF02424 ApbE family AKN87_00625 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN87_00625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AKN87_00635 PF02687 FtsX-like permease family AKN87_00635 PF12704 MacB-like periplasmic core domain AKN87_00640 PF00005 ABC transporter AKN87_00645 PF01435 Peptidase family M48 AKN87_00650 PF00155 Aminotransferase class I and II AKN87_00655 PF01641 SelR domain AKN87_00665 PF00571 CBS domain AKN87_00665 PF03471 Transporter associated domain AKN87_00665 PF01595 Cyclin M transmembrane N-terminal domain AKN87_00675 PF02620 Large ribosomal RNA subunit accumulation protein YceD AKN87_00680 PF01783 Ribosomal L32p protein family AKN87_00685 PF02504 Fatty acid synthesis protein AKN87_00690 PF00698 Acyl transferase domain AKN87_00700 PF00550 Phosphopantetheine attachment site AKN87_00705 PF00109 Beta-ketoacyl synthase, N-terminal domain AKN87_00705 PF02801 Beta-ketoacyl synthase, C-terminal domain AKN87_00710 PF01063 Amino-transferase class IV AKN87_00715 PF02618 YceG-like family AKN87_00720 PF02223 Thymidylate kinase AKN87_00725 PF09115 DNA polymerase III, delta subunit, C terminal AKN87_00735 PF01026 TatD related DNase AKN87_00740 PF11898 Domain of unknown function (DUF3418) AKN87_00740 PF00270 DEAD/DEAH box helicase AKN87_00740 PF04408 Helicase associated domain (HA2) AKN87_00740 PF00271 Helicase conserved C-terminal domain AKN87_00740 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AKN87_00745 PF01136 Peptidase family U32 AKN87_00745 PF12392 Collagenase AKN87_00750 PF05191 Adenylate kinase, active site lid AKN87_00755 PF00814 Glycoprotease family AKN87_00760 PF04445 Putative SAM-dependent methyltransferase AKN87_00770 PF01396 Topoisomerase DNA binding C4 zinc finger AKN87_00770 PF01751 Toprim domain AKN87_00770 PF01131 DNA topoisomerase AKN87_00770 PF08272 Topoisomerase I zinc-ribbon-like AKN87_00780 PF00849 RNA pseudouridylate synthase AKN87_00785 PF07715 TonB-dependent Receptor Plug Domain AKN87_00785 PF04886 PT repeat AKN87_00785 PF00593 TonB dependent receptor AKN87_00795 PF05171 Haemin-degrading HemS.ChuX domain AKN87_00805 PF02472 Biopolymer transport protein ExbD/TolR AKN87_00810 PF01497 Periplasmic binding protein AKN87_00815 PF01032 FecCD transport family AKN87_00820 PF00005 ABC transporter AKN87_00840 PF14698 Argininosuccinate lyase C-terminal AKN87_00840 PF00206 Lyase AKN87_00850 PF00465 Iron-containing alcohol dehydrogenase AKN87_00855 PF01699 Sodium/calcium exchanger protein AKN87_00860 PF00939 Sodium:sulfate symporter transmembrane region AKN87_00865 PF03880 DbpA RNA binding domain AKN87_00865 PF00270 DEAD/DEAH box helicase AKN87_00865 PF00271 Helicase conserved C-terminal domain AKN87_00885 PF00551 Formyl transferase AKN87_00890 PF00586 AIR synthase related protein, N-terminal domain AKN87_00890 PF02769 AIR synthase related protein, C-terminal domain AKN87_00900 PF03737 Aldolase/RraA AKN87_00905 PF01544 CorA-like Mg2+ transporter protein AKN87_00925 PF00691 OmpA family AKN87_00925 PF05736 OprF membrane domain AKN87_00935 PF13617 YnbE-like lipoprotein AKN87_00950 PF00027 Cyclic nucleotide-binding domain AKN87_00950 PF00325 Bacterial regulatory proteins, crp family AKN87_00960 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AKN87_00960 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AKN87_00965 PF02673 Bacitracin resistance protein BacA AKN87_00970 PF00440 Bacterial regulatory proteins, tetR family AKN87_00970 PF16295 Tetracyclin repressor-like, C-terminal domain AKN87_00980 PF00933 Glycosyl hydrolase family 3 N terminal domain AKN87_00985 PF01048 Phosphorylase superfamily AKN87_00995 PF00004 ATPase family associated with various cellular activities (AAA) AKN87_00995 PF07724 AAA domain (Cdc48 subfamily) AKN87_00995 PF17871 AAA lid domain AKN87_00995 PF02861 Clp amino terminal domain, pathogenicity island component AKN87_00995 PF10431 C-terminal, D2-small domain, of ClpB protein AKN87_01000 PF09335 SNARE associated Golgi protein AKN87_01005 PF02245 Methylpurine-DNA glycosylase (MPG) AKN87_01010 PF00171 Aldehyde dehydrogenase family AKN87_01015 PF01467 Cytidylyltransferase-like AKN87_01025 PF02590 Predicted SPOUT methyltransferase AKN87_01030 PF03717 Penicillin-binding Protein dimerisation domain AKN87_01030 PF00905 Penicillin binding protein transpeptidase domain AKN87_01035 PF01098 Cell cycle protein AKN87_01040 PF13406 Transglycosylase SLT domain AKN87_01045 PF03330 Lytic transglycolase AKN87_01045 PF05036 Sporulation related domain AKN87_01050 PF00768 D-alanyl-D-alanine carboxypeptidase AKN87_01050 PF07943 Penicillin-binding protein 5, C-terminal domain AKN87_01055 PF04359 Protein of unknown function (DUF493) AKN87_01060 PF03099 Biotin/lipoate A/B protein ligase family AKN87_01065 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AKN87_01065 PF04055 Radical SAM superfamily AKN87_01070 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AKN87_01100 PF01925 Sulfite exporter TauE/SafE AKN87_01105 PF00270 DEAD/DEAH box helicase AKN87_01105 PF00271 Helicase conserved C-terminal domain AKN87_01105 PF00570 HRDC domain AKN87_01105 PF16124 RecQ zinc-binding AKN87_01105 PF09382 RQC domain AKN87_01110 PF00893 Small Multidrug Resistance protein AKN87_01115 PF00893 Small Multidrug Resistance protein AKN87_01120 PF01814 Hemerythrin HHE cation binding domain AKN87_01125 PF04055 Radical SAM superfamily AKN87_01130 PF01242 6-pyruvoyl tetrahydropterin synthase AKN87_01135 PF06508 Queuosine biosynthesis protein QueC AKN87_01140 PF00459 Inositol monophosphatase family AKN87_01145 PF05532 CsbD-like AKN87_01150 PF04972 BON domain AKN87_01155 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AKN87_01160 PF01554 MatE AKN87_01165 PF00398 Ribosomal RNA adenine dimethylase AKN87_01170 PF04379 ApaG domain AKN87_01175 PF00149 Calcineurin-like phosphoesterase AKN87_01180 PF00581 Rhodanese-like domain AKN87_01185 PF03466 LysR substrate binding domain AKN87_01185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_01190 PF17284 Spermidine synthase tetramerisation domain AKN87_01200 PF02028 BCCT, betaine/carnitine/choline family transporter AKN87_01210 PF02789 Cytosol aminopeptidase family, N-terminal domain AKN87_01210 PF00883 Cytosol aminopeptidase family, catalytic domain AKN87_01215 PF03739 Lipopolysaccharide export system permease LptF/LptG AKN87_01220 PF03739 Lipopolysaccharide export system permease LptF/LptG AKN87_01225 PF03969 AFG1-like ATPase AKN87_01230 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AKN87_01235 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AKN87_01240 PF04314 Copper chaperone PCu(A)C AKN87_01245 PF01797 Transposase IS200 like AKN87_01250 PF01527 Transposase AKN87_01255 PF00665 Integrase core domain AKN87_01265 PF02617 ATP-dependent Clp protease adaptor protein ClpS AKN87_01270 PF10431 C-terminal, D2-small domain, of ClpB protein AKN87_01270 PF02861 Clp amino terminal domain, pathogenicity island component AKN87_01270 PF17871 AAA lid domain AKN87_01270 PF07724 AAA domain (Cdc48 subfamily) AKN87_01270 PF00004 ATPase family associated with various cellular activities (AAA) AKN87_01275 PF00258 Flavodoxin AKN87_01280 PF00849 RNA pseudouridylate synthase AKN87_01285 PF01575 MaoC like domain AKN87_01290 PF13193 AMP-binding enzyme C-terminal domain AKN87_01290 PF00501 AMP-binding enzyme AKN87_01295 PF00582 Universal stress protein family AKN87_01300 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN87_01310 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AKN87_01315 PF04977 Septum formation initiator AKN87_01320 PF03952 Enolase, N-terminal domain AKN87_01320 PF00113 Enolase, C-terminal TIM barrel domain AKN87_01325 PF00793 DAHP synthetase I family AKN87_01330 PF00117 Glutamine amidotransferase class-I AKN87_01330 PF06418 CTP synthase N-terminus AKN87_01335 PF00183 Hsp90 protein AKN87_01335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_01355 PF13307 Helicase C-terminal domain AKN87_01355 PF06733 DEAD_2 AKN87_01360 PF02810 SEC-C motif AKN87_01365 PF01180 Dihydroorotate dehydrogenase AKN87_01370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AKN87_01375 PF00873 AcrB/AcrD/AcrF family AKN87_01380 PF00873 AcrB/AcrD/AcrF family AKN87_01385 PF02321 Outer membrane efflux protein AKN87_01390 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AKN87_01405 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AKN87_01410 PF00920 Dehydratase family AKN87_01415 PF01081 KDPG and KHG aldolase AKN87_01425 PF01207 Dihydrouridine synthase (Dus) AKN87_01430 PF01176 Translation initiation factor 1A / IF-1 AKN87_01435 PF04377 Arginine-tRNA-protein transferase, C terminus AKN87_01435 PF04376 Arginine-tRNA-protein transferase, N terminus AKN87_01440 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AKN87_01445 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AKN87_01445 PF17854 FtsK alpha domain AKN87_01445 PF09397 Ftsk gamma domain AKN87_01445 PF01580 FtsK/SpoIIIE family AKN87_01450 PF03548 Outer membrane lipoprotein carrier protein LolA AKN87_01455 PF16193 AAA C-terminal domain AKN87_01455 PF12002 MgsA AAA+ ATPase C terminal AKN87_01455 PF00004 ATPase family associated with various cellular activities (AAA) AKN87_01460 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AKN87_01465 PF02403 Seryl-tRNA synthetase N-terminal domain AKN87_01465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AKN87_01475 PF03734 L,D-transpeptidase catalytic domain AKN87_01480 PF03129 Anticodon binding domain AKN87_01480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AKN87_01480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AKN87_01480 PF02824 TGS domain AKN87_01485 PF05198 Translation initiation factor IF-3, N-terminal domain AKN87_01485 PF00707 Translation initiation factor IF-3, C-terminal domain AKN87_01490 PF01632 Ribosomal protein L35 AKN87_01495 PF00453 Ribosomal protein L20 AKN87_01500 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AKN87_01500 PF01409 tRNA synthetases class II core domain (F) AKN87_01505 PF03484 tRNA synthetase B5 domain AKN87_01505 PF03147 Ferredoxin-fold anticodon binding domain AKN87_01505 PF01588 Putative tRNA binding domain AKN87_01505 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AKN87_01505 PF03483 B3/4 domain AKN87_01510 PF00216 Bacterial DNA-binding protein AKN87_01520 PF02635 DsrE/DsrF-like family AKN87_01525 PF02635 DsrE/DsrF-like family AKN87_01535 PF04358 DsrC like protein AKN87_01540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AKN87_01540 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN87_01545 PF01965 DJ-1/PfpI family AKN87_01555 PF00970 Oxidoreductase FAD-binding domain AKN87_01555 PF00111 2Fe-2S iron-sulfur cluster binding domain AKN87_01555 PF00175 Oxidoreductase NAD-binding domain AKN87_01580 PF03781 Sulfatase-modifying factor enzyme 1 AKN87_01590 PF00005 ABC transporter AKN87_01625 PF04545 Sigma-70, region 4 AKN87_01625 PF04542 Sigma-70 region 2 AKN87_01625 PF00140 Sigma-70 factor, region 1.2 AKN87_01625 PF04539 Sigma-70 region 3 AKN87_01630 PF12167 Arm DNA-binding domain AKN87_01630 PF00589 Phage integrase family AKN87_01665 PF00436 Single-strand binding protein family AKN87_01675 PF02086 D12 class N6 adenine-specific DNA methyltransferase AKN87_01680 PF00893 Small Multidrug Resistance protein AKN87_01700 PF02599 Global regulator protein family AKN87_01730 PF00717 Peptidase S24-like AKN87_01730 PF01381 Helix-turn-helix AKN87_01815 PF00574 Clp protease AKN87_01915 PF10431 C-terminal, D2-small domain, of ClpB protein AKN87_01915 PF02861 Clp amino terminal domain, pathogenicity island component AKN87_01915 PF17871 AAA lid domain AKN87_01915 PF07724 AAA domain (Cdc48 subfamily) AKN87_01915 PF00004 ATPase family associated with various cellular activities (AAA) AKN87_01925 PF18030 RimK PreATP-grasp domain AKN87_01925 PF08443 RimK-like ATP-grasp domain AKN87_01940 PF07690 Major Facilitator Superfamily AKN87_01955 PF00579 tRNA synthetases class I (W and Y) AKN87_01960 PF01258 Prokaryotic dksA/traR C4-type zinc finger AKN87_01970 PF04228 Putative neutral zinc metallopeptidase AKN87_01975 PF00664 ABC transporter transmembrane region AKN87_01975 PF00005 ABC transporter AKN87_01980 PF00664 ABC transporter transmembrane region AKN87_01980 PF00005 ABC transporter AKN87_01990 PF00075 RNase H AKN87_01995 PF00929 Exonuclease AKN87_02000 PF04143 Sulphur transport AKN87_02010 PF00753 Metallo-beta-lactamase superfamily AKN87_02020 PF01740 STAS domain AKN87_02020 PF00916 Sulfate permease family AKN87_02050 PF00293 NUDIX domain AKN87_02055 PF00132 Bacterial transferase hexapeptide (six repeats) AKN87_02060 PF02222 ATP-grasp domain AKN87_02070 PF10576 Iron-sulfur binding domain of endonuclease III AKN87_02070 PF00633 Helix-hairpin-helix motif AKN87_02070 PF00730 HhH-GPD superfamily base excision DNA repair protein AKN87_02075 PF01235 Sodium:alanine symporter family AKN87_02080 PF08534 Redoxin AKN87_02095 PF01206 Sulfurtransferase TusA AKN87_02100 PF01513 ATP-NAD kinase AKN87_02105 PF00149 Calcineurin-like phosphoesterase AKN87_02110 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AKN87_02110 PF01694 Rhomboid family AKN87_02125 PF01433 Peptidase family M1 domain AKN87_02125 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AKN87_02125 PF11940 Domain of unknown function (DUF3458) Ig-like fold AKN87_02130 PF00107 Zinc-binding dehydrogenase AKN87_02130 PF08240 Alcohol dehydrogenase GroES-like domain AKN87_02135 PF00756 Putative esterase AKN87_02140 PF01272 Transcription elongation factor, GreA/GreB, C-term AKN87_02140 PF03449 Transcription elongation factor, N-terminal AKN87_02150 PF05726 Pirin C-terminal cupin domain AKN87_02150 PF02678 Pirin AKN87_02155 PF00857 Isochorismatase family AKN87_02165 PF00005 ABC transporter AKN87_02170 PF13472 GDSL-like Lipase/Acylhydrolase family AKN87_02180 PF01979 Amidohydrolase family AKN87_02185 PF00216 Bacterial DNA-binding protein AKN87_02190 PF00005 ABC transporter AKN87_02195 PF00005 ABC transporter AKN87_02195 PF12399 Branched-chain amino acid ATP-binding cassette transporter AKN87_02200 PF02653 Branched-chain amino acid transport system / permease component AKN87_02200 PF11862 Domain of unknown function (DUF3382) AKN87_02205 PF02653 Branched-chain amino acid transport system / permease component AKN87_02210 PF13458 Periplasmic binding protein AKN87_02215 PF00929 Exonuclease AKN87_02220 PF01979 Amidohydrolase family AKN87_02225 PF00764 Arginosuccinate synthase AKN87_02230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AKN87_02245 PF00106 short chain dehydrogenase AKN87_02250 PF13419 Haloacid dehalogenase-like hydrolase AKN87_02265 PF00860 Permease family AKN87_02270 PF00080 Copper/zinc superoxide dismutase (SODC) AKN87_02275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_02280 PF00330 Aconitase family (aconitate hydratase) AKN87_02285 PF00694 Aconitase C-terminal domain AKN87_02290 PF00180 Isocitrate/isopropylmalate dehydrogenase AKN87_02295 PF01118 Semialdehyde dehydrogenase, NAD binding domain AKN87_02295 PF02774 Semialdehyde dehydrogenase, dimerisation domain AKN87_02300 PF01545 Cation efflux family AKN87_02300 PF16916 Dimerisation domain of Zinc Transporter AKN87_02310 PF05552 Conserved TM helix AKN87_02310 PF00924 Mechanosensitive ion channel AKN87_02315 PF00005 ABC transporter AKN87_02320 PF03379 CcmB protein AKN87_02325 PF01578 Cytochrome C assembly protein AKN87_02330 PF04995 Heme exporter protein D (CcmD) AKN87_02335 PF03100 CcmE AKN87_02340 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AKN87_02340 PF01578 Cytochrome C assembly protein AKN87_02345 PF08534 Redoxin AKN87_02350 PF03918 Cytochrome C biogenesis protein AKN87_02360 PF02558 Ketopantoate reductase PanE/ApbA AKN87_02360 PF08546 Ketopantoate reductase PanE/ApbA C terminal AKN87_02365 PF13677 Membrane MotB of proton-channel complex MotA/MotB AKN87_02365 PF00691 OmpA family AKN87_02370 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AKN87_02370 PF01243 Pyridoxamine 5'-phosphate oxidase AKN87_02380 PF05433 Glycine zipper 2TM domain AKN87_02405 PF02607 B12 binding domain AKN87_02405 PF02310 B12 binding domain AKN87_02405 PF02574 Homocysteine S-methyltransferase AKN87_02405 PF00809 Pterin binding enzyme AKN87_02405 PF02965 Vitamin B12 dependent methionine synthase, activation domain AKN87_02420 PF00970 Oxidoreductase FAD-binding domain AKN87_02420 PF00175 Oxidoreductase NAD-binding domain AKN87_02425 PF00675 Insulinase (Peptidase family M16) AKN87_02430 PF10672 S-adenosylmethionine-dependent methyltransferase AKN87_02430 PF01170 Putative RNA methylase family UPF0020 AKN87_02430 PF02926 THUMP domain AKN87_02435 PF00849 RNA pseudouridylate synthase AKN87_02435 PF01479 S4 domain AKN87_02440 PF01011 PQQ enzyme repeat AKN87_02445 PF00330 Aconitase family (aconitate hydratase) AKN87_02445 PF06434 Aconitate hydratase 2 N-terminus AKN87_02445 PF11791 Aconitate B N-terminal domain AKN87_02450 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AKN87_02450 PF01648 4'-phosphopantetheinyl transferase superfamily AKN87_02455 PF01207 Dihydrouridine synthase (Dus) AKN87_02460 PF00665 Integrase core domain AKN87_02465 PF01527 Transposase AKN87_02495 PF17946 RecC C-terminal domain AKN87_02500 PF12705 PD-(D/E)XK nuclease superfamily AKN87_02500 PF00580 UvrD/REP helicase N-terminal domain AKN87_02500 PF13361 UvrD-like helicase C-terminal domain AKN87_02505 PF13538 UvrD-like helicase C-terminal domain AKN87_02510 PF01906 Putative heavy-metal-binding AKN87_02520 PF00923 Transaldolase/Fructose-6-phosphate aldolase AKN87_02530 PF03937 Flavinator of succinate dehydrogenase AKN87_02540 PF00890 FAD binding domain AKN87_02540 PF02910 Fumarate reductase flavoprotein C-term AKN87_02545 PF00378 Enoyl-CoA hydratase/isomerase AKN87_02560 PF00158 Sigma-54 interaction domain AKN87_02560 PF00072 Response regulator receiver domain AKN87_02560 PF02954 Bacterial regulatory protein, Fis family AKN87_02565 PF00497 Bacterial extracellular solute-binding proteins, family 3 AKN87_02565 PF00512 His Kinase A (phospho-acceptor) domain AKN87_02565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_02570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AKN87_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN87_02575 PF08281 Sigma-70, region 4 AKN87_02575 PF04542 Sigma-70 region 2 AKN87_02580 PF03873 Anti sigma-E protein RseA, C-terminal domain AKN87_02580 PF03872 Anti sigma-E protein RseA, N-terminal domain AKN87_02585 PF17188 MucB/RseB C-terminal domain AKN87_02585 PF03888 MucB/RseB N-terminal domain AKN87_02595 PF13180 PDZ domain AKN87_02600 PF00679 Elongation factor G C-terminus AKN87_02600 PF06421 GTP-binding protein LepA C-terminus AKN87_02600 PF03144 Elongation factor Tu domain 2 AKN87_02600 PF00009 Elongation factor Tu GTP binding domain AKN87_02605 PF10502 Signal peptidase, peptidase S26 AKN87_02610 PF14622 Ribonuclease-III-like AKN87_02610 PF00035 Double-stranded RNA binding motif AKN87_02615 PF01926 50S ribosome-binding GTPase AKN87_02615 PF07650 KH domain AKN87_02620 PF11967 Recombination protein O N terminal AKN87_02620 PF02565 Recombination protein O C terminal AKN87_02625 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AKN87_02630 PF00440 Bacterial regulatory proteins, tetR family AKN87_02645 PF00005 ABC transporter AKN87_02650 PF01061 ABC-2 type transporter AKN87_02655 PF00877 NlpC/P60 family AKN87_02660 PF00877 NlpC/P60 family AKN87_02665 PF00291 Pyridoxal-phosphate dependent enzyme AKN87_02675 PF00672 HAMP domain AKN87_02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_02675 PF00512 His Kinase A (phospho-acceptor) domain AKN87_02685 PF00486 Transcriptional regulatory protein, C terminal AKN87_02685 PF00072 Response regulator receiver domain AKN87_02690 PF03795 YCII-related domain AKN87_02695 PF04279 Intracellular septation protein A AKN87_02700 PF02811 PHP domain AKN87_02705 PF01300 Telomere recombination AKN87_02710 PF02616 Segregation and condensation protein ScpA AKN87_02715 PF04079 Segregation and condensation complex subunit ScpB AKN87_02720 PF00326 Prolyl oligopeptidase family AKN87_02725 PF04055 Radical SAM superfamily AKN87_02725 PF13186 Iron-sulfur cluster-binding domain AKN87_02730 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AKN87_02735 PF03070 TENA/THI-4/PQQC family AKN87_02740 PF12706 Beta-lactamase superfamily domain AKN87_02745 PF00171 Aldehyde dehydrogenase family AKN87_02760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN87_02765 PF01011 PQQ enzyme repeat AKN87_02765 PF13360 PQQ-like domain AKN87_02775 PF00196 Bacterial regulatory proteins, luxR family AKN87_02775 PF00072 Response regulator receiver domain AKN87_02785 PF00072 Response regulator receiver domain AKN87_02785 PF00196 Bacterial regulatory proteins, luxR family AKN87_02790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_02790 PF00512 His Kinase A (phospho-acceptor) domain AKN87_02790 PF09456 RcsC Alpha-Beta-Loop (ABL) AKN87_02790 PF00072 Response regulator receiver domain AKN87_02805 PF01966 HD domain AKN87_02810 PF03747 ADP-ribosylglycohydrolase AKN87_02815 PF00226 DnaJ domain AKN87_02815 PF05099 Tellurite resistance protein TerB AKN87_02825 PF13476 AAA domain AKN87_02830 PF00149 Calcineurin-like phosphoesterase AKN87_02830 PF12320 Type 5 capsule protein repressor C-terminal domain AKN87_02840 PF01594 AI-2E family transporter AKN87_02850 PF02798 Glutathione S-transferase, N-terminal domain AKN87_02850 PF00043 Glutathione S-transferase, C-terminal domain AKN87_02855 PF00561 alpha/beta hydrolase fold AKN87_02855 PF00364 Biotin-requiring enzyme AKN87_02870 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AKN87_02870 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AKN87_02880 PF01726 LexA DNA binding domain AKN87_02880 PF00717 Peptidase S24-like AKN87_02885 PF03846 Cell division inhibitor SulA AKN87_02890 PF00749 tRNA synthetases class I (E and Q), catalytic domain AKN87_02895 PF07690 Major Facilitator Superfamily AKN87_02900 PF01551 Peptidase family M23 AKN87_02900 PF01476 LysM domain AKN87_02915 PF01975 Survival protein SurE AKN87_02920 PF01142 tRNA pseudouridine synthase D (TruD) AKN87_02925 PF02542 YgbB family AKN87_02930 PF00375 Sodium:dicarboxylate symporter family AKN87_02935 PF04357 TamB, inner membrane protein subunit of TAM complex AKN87_02940 PF01103 Surface antigen AKN87_02940 PF17243 POTRA domain TamA domain 1 AKN87_02940 PF07244 Surface antigen variable number repeat AKN87_02945 PF03372 Endonuclease/Exonuclease/phosphatase family AKN87_02950 PF01062 Bestrophin, RFP-TM, chloride channel AKN87_02955 PF00488 MutS domain V AKN87_02955 PF01624 MutS domain I AKN87_02955 PF05188 MutS domain II AKN87_02955 PF05192 MutS domain III AKN87_02955 PF05190 MutS family domain IV AKN87_02960 PF00037 4Fe-4S binding domain AKN87_02960 PF11953 Domain of unknown function (DUF3470) AKN87_03000 PF04717 Type VI secretion system, phage-baseplate injector AKN87_03000 PF06715 Gp5 C-terminal repeat (3 copies) AKN87_03020 PF06744 Type VI secretion protein IcmF C-terminal AKN87_03020 PF06761 Intracellular multiplication and human macrophage-killing AKN87_03020 PF14331 ImcF-related N-terminal domain AKN87_03030 PF00691 OmpA family AKN87_03075 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AKN87_03075 PF04717 Type VI secretion system, phage-baseplate injector AKN87_03075 PF13296 Putative type VI secretion system Rhs element Vgr AKN87_03115 PF06715 Gp5 C-terminal repeat (3 copies) AKN87_03115 PF04717 Type VI secretion system, phage-baseplate injector AKN87_03120 PF00004 ATPase family associated with various cellular activities (AAA) AKN87_03120 PF17871 AAA lid domain AKN87_03120 PF10431 C-terminal, D2-small domain, of ClpB protein AKN87_03120 PF07724 AAA domain (Cdc48 subfamily) AKN87_03135 PF04965 Gene 25-like lysozyme AKN87_03145 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AKN87_03150 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AKN87_03185 PF13276 HTH-like domain AKN87_03185 PF13683 Integrase core domain AKN87_03190 PF01527 Transposase AKN87_03210 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AKN87_03215 PF03692 Putative zinc- or iron-chelating domain AKN87_03220 PF09179 TilS substrate binding domain AKN87_03220 PF11734 TilS substrate C-terminal domain AKN87_03220 PF01171 PP-loop family AKN87_03225 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AKN87_03230 PF07733 Bacterial DNA polymerase III alpha NTPase domain AKN87_03230 PF14579 Helix-hairpin-helix motif AKN87_03230 PF02811 PHP domain AKN87_03230 PF01336 OB-fold nucleic acid binding domain AKN87_03230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AKN87_03240 PF07977 FabA-like domain AKN87_03245 PF02801 Beta-ketoacyl synthase, C-terminal domain AKN87_03245 PF00109 Beta-ketoacyl synthase, N-terminal domain AKN87_03265 PF00875 DNA photolyase AKN87_03265 PF03441 FAD binding domain of DNA photolyase AKN87_03270 PF13180 PDZ domain AKN87_03275 PF01784 NIF3 (NGG1p interacting factor 3) AKN87_03285 PF06832 Penicillin-Binding Protein C-terminus Family AKN87_03285 PF00912 Transglycosylase AKN87_03285 PF00905 Penicillin binding protein transpeptidase domain AKN87_03290 PF03883 Peroxide stress protein YaaA AKN87_03295 PF00155 Aminotransferase class I and II AKN87_03300 PF00815 Histidinol dehydrogenase AKN87_03305 PF01634 ATP phosphoribosyltransferase AKN87_03310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AKN87_03315 PF01722 BolA-like protein AKN87_03325 PF05494 MlaC protein AKN87_03335 PF02405 Permease MlaE AKN87_03340 PF00005 ABC transporter AKN87_03345 PF00571 CBS domain AKN87_03345 PF01380 SIS domain AKN87_03360 PF03968 OstA-like protein AKN87_03365 PF00005 ABC transporter AKN87_03365 PF12399 Branched-chain amino acid ATP-binding cassette transporter AKN87_03370 PF01844 HNH endonuclease AKN87_03380 PF00664 ABC transporter transmembrane region AKN87_03380 PF00005 ABC transporter AKN87_03405 PF01925 Sulfite exporter TauE/SafE AKN87_03410 PF00293 NUDIX domain AKN87_03410 PF09297 NADH pyrophosphatase zinc ribbon domain AKN87_03410 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AKN87_03420 PF00378 Enoyl-CoA hydratase/isomerase AKN87_03425 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AKN87_03435 PF00034 Cytochrome c AKN87_03435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN87_03440 PF01266 FAD dependent oxidoreductase AKN87_03440 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AKN87_03445 PF01253 Translation initiation factor SUI1 AKN87_03450 PF00474 Sodium:solute symporter family AKN87_03455 PF01645 Conserved region in glutamate synthase AKN87_03460 PF01169 Uncharacterized protein family UPF0016 AKN87_03465 PF05233 PHB accumulation regulatory domain AKN87_03465 PF07879 PHB/PHA accumulation regulator DNA-binding domain AKN87_03470 PF12323 Helix-turn-helix domain AKN87_03470 PF07282 Putative transposase DNA-binding domain AKN87_03470 PF01385 Probable transposase AKN87_03495 PF00857 Isochorismatase family AKN87_03500 PF02678 Pirin AKN87_03500 PF05726 Pirin C-terminal cupin domain AKN87_03525 PF00893 Small Multidrug Resistance protein AKN87_03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_03530 PF03466 LysR substrate binding domain AKN87_03550 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AKN87_03550 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AKN87_03555 PF00753 Metallo-beta-lactamase superfamily AKN87_03560 PF01835 MG2 domain AKN87_03560 PF07678 A-macroglobulin TED domain AKN87_03560 PF00207 Alpha-2-macroglobulin family AKN87_03560 PF07703 Alpha-2-macroglobulin bait region domain AKN87_03560 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AKN87_03560 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AKN87_03560 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AKN87_03560 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AKN87_03560 PF17962 Bacterial macroglobulin domain 6 AKN87_03575 PF05872 Bacterial protein of unknown function (DUF853) AKN87_03580 PF00551 Formyl transferase AKN87_03580 PF01842 ACT domain AKN87_03585 PF04333 MlaA lipoprotein AKN87_03590 PF01406 tRNA synthetases class I (C) catalytic domain AKN87_03590 PF09190 DALR domain AKN87_03595 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AKN87_03595 PF00749 tRNA synthetases class I (E and Q), catalytic domain AKN87_03600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AKN87_03605 PF00149 Calcineurin-like phosphoesterase AKN87_03610 PF02667 Short chain fatty acid transporter AKN87_03615 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AKN87_03615 PF03120 NAD-dependent DNA ligase OB-fold domain AKN87_03615 PF01653 NAD-dependent DNA ligase adenylation domain AKN87_03615 PF12826 Helix-hairpin-helix motif AKN87_03615 PF00533 BRCA1 C Terminus (BRCT) domain AKN87_03620 PF04354 ZipA, C-terminal FtsZ-binding domain AKN87_03625 PF02779 Transketolase, pyrimidine binding domain AKN87_03625 PF02780 Transketolase, C-terminal domain AKN87_03625 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AKN87_03630 PF03831 PhnA domain AKN87_03630 PF08274 PhnA Zinc-Ribbon AKN87_03635 PF00575 S1 RNA binding domain AKN87_03640 PF02224 Cytidylate kinase AKN87_03645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AKN87_03650 PF00155 Aminotransferase class I and II AKN87_03655 PF00800 Prephenate dehydratase AKN87_03655 PF01817 Chorismate mutase type II AKN87_03655 PF01842 ACT domain AKN87_03660 PF00266 Aminotransferase class-V AKN87_03665 PF00521 DNA gyrase/topoisomerase IV, subunit A AKN87_03665 PF03989 DNA gyrase C-terminal domain, beta-propeller AKN87_03670 PF01008 Initiation factor 2 subunit family AKN87_03675 PF00005 ABC transporter AKN87_03675 PF00664 ABC transporter transmembrane region AKN87_03680 PF00308 Bacterial dnaA protein AKN87_03690 PF01066 CDP-alcohol phosphatidyltransferase AKN87_03695 PF01722 BolA-like protein AKN87_03700 PF03573 outer membrane porin, OprD family AKN87_03725 PF02472 Biopolymer transport protein ExbD/TolR AKN87_03730 PF01618 MotA/TolQ/ExbB proton channel family AKN87_03735 PF01618 MotA/TolQ/ExbB proton channel family AKN87_03745 PF13230 Glutamine amidotransferases class-II AKN87_03755 PF11799 impB/mucB/samB family C-terminal domain AKN87_03755 PF11798 IMS family HHH motif AKN87_03755 PF00817 impB/mucB/samB family AKN87_03775 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AKN87_03780 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AKN87_03805 PF01925 Sulfite exporter TauE/SafE AKN87_03810 PF01613 Flavin reductase like domain AKN87_03815 PF08267 Cobalamin-independent synthase, N-terminal domain AKN87_03815 PF01717 Cobalamin-independent synthase, Catalytic domain AKN87_03825 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_03830 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_03835 PF00005 ABC transporter AKN87_03835 PF12857 TOBE-like domain AKN87_03840 PF00224 Pyruvate kinase, barrel domain AKN87_03840 PF02887 Pyruvate kinase, alpha/beta domain AKN87_03845 PF00462 Glutaredoxin AKN87_03850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AKN87_03850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AKN87_03855 PF00005 ABC transporter AKN87_03855 PF08402 TOBE domain AKN87_03860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AKN87_03860 PF00529 HlyD membrane-fusion protein of T1SS AKN87_03865 PF00873 AcrB/AcrD/AcrF family AKN87_03870 PF02321 Outer membrane efflux protein AKN87_03875 PF00691 OmpA family AKN87_03885 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AKN87_03885 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AKN87_03895 PF00271 Helicase conserved C-terminal domain AKN87_03895 PF18339 RapA N-terminal Tudor like domain 1 AKN87_03895 PF18337 RapA N-terminal Tudor like domain AKN87_03895 PF12137 RNA polymerase recycling family C-terminal AKN87_03895 PF00176 SNF2 family N-terminal domain AKN87_03900 PF01980 tRNA-methyltransferase O AKN87_03900 PF18389 TrmO C-terminal domain AKN87_03905 PF00483 Nucleotidyl transferase AKN87_03910 PF00270 DEAD/DEAH box helicase AKN87_03910 PF00271 Helicase conserved C-terminal domain AKN87_03925 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AKN87_03930 PF01899 Na+/H+ ion antiporter subunit AKN87_03935 PF00361 Proton-conducting membrane transporter AKN87_03940 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AKN87_03945 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AKN87_03945 PF00361 Proton-conducting membrane transporter AKN87_03945 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AKN87_03945 PF13244 Domain of unknown function (DUF4040) AKN87_03950 PF08240 Alcohol dehydrogenase GroES-like domain AKN87_03950 PF00107 Zinc-binding dehydrogenase AKN87_03965 PF17757 UvrB interaction domain AKN87_03965 PF04851 Type III restriction enzyme, res subunit AKN87_03965 PF02151 UvrB/uvrC motif AKN87_03965 PF12344 Ultra-violet resistance protein B AKN87_03965 PF00271 Helicase conserved C-terminal domain AKN87_03970 PF00155 Aminotransferase class I and II AKN87_03975 PF00005 ABC transporter AKN87_03980 PF02687 FtsX-like permease family AKN87_03980 PF12704 MacB-like periplasmic core domain AKN87_03990 PF17783 CvfB-like winged helix domain AKN87_03990 PF13509 S1 domain AKN87_03995 PF01351 Ribonuclease HII AKN87_04000 PF02684 Lipid-A-disaccharide synthetase AKN87_04005 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AKN87_04005 PF00132 Bacterial transferase hexapeptide (six repeats) AKN87_04010 PF07977 FabA-like domain AKN87_04015 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AKN87_04015 PF00132 Bacterial transferase hexapeptide (six repeats) AKN87_04020 PF03938 Outer membrane protein (OmpH-like) AKN87_04025 PF01103 Surface antigen AKN87_04025 PF07244 Surface antigen variable number repeat AKN87_04030 PF13180 PDZ domain AKN87_04030 PF17820 PDZ domain AKN87_04030 PF02163 Peptidase family M50 AKN87_04035 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AKN87_04035 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AKN87_04035 PF13288 DXP reductoisomerase C-terminal domain AKN87_04045 PF01255 Putative undecaprenyl diphosphate synthase AKN87_04050 PF01765 Ribosome recycling factor AKN87_04055 PF00696 Amino acid kinase family AKN87_04060 PF00889 Elongation factor TS AKN87_04065 PF00318 Ribosomal protein S2 AKN87_04070 PF00557 Metallopeptidase family M24 AKN87_04075 PF01842 ACT domain AKN87_04075 PF08335 GlnD PII-uridylyltransferase AKN87_04075 PF01966 HD domain AKN87_04075 PF01909 Nucleotidyltransferase domain AKN87_04080 PF03960 ArsC family AKN87_04085 PF14602 Hexapeptide repeat of succinyl-transferase AKN87_04085 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AKN87_04090 PF00266 Aminotransferase class-V AKN87_04095 PF02657 Fe-S metabolism associated domain AKN87_04115 PF00291 Pyridoxal-phosphate dependent enzyme AKN87_04115 PF14821 Threonine synthase N terminus AKN87_04120 PF00742 Homoserine dehydrogenase AKN87_04120 PF03447 Homoserine dehydrogenase, NAD binding domain AKN87_04120 PF01842 ACT domain AKN87_04125 PF00589 Phage integrase family AKN87_04125 PF02899 Phage integrase, N-terminal SAM-like domain AKN87_04130 PF07690 Major Facilitator Superfamily AKN87_04135 PF09411 Lipid A 3-O-deacylase (PagL) AKN87_04140 PF01177 Asp/Glu/Hydantoin racemase AKN87_04145 PF00899 ThiF family AKN87_04150 PF17827 PrmC N-terminal domain AKN87_04150 PF05175 Methyltransferase small domain AKN87_04155 PF03462 PCRF domain AKN87_04155 PF00472 RF-1 domain AKN87_04160 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AKN87_04160 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AKN87_04160 PF01488 Shikimate / quinate 5-dehydrogenase AKN87_04170 PF03550 Outer membrane lipoprotein LolB AKN87_04175 PF00288 GHMP kinases N terminal domain AKN87_04175 PF08544 GHMP kinases C terminal AKN87_04185 PF14572 Phosphoribosyl synthetase-associated domain AKN87_04185 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AKN87_04190 PF01386 Ribosomal L25p family AKN87_04190 PF14693 Ribosomal protein TL5, C-terminal domain AKN87_04195 PF01195 Peptidyl-tRNA hydrolase AKN87_04200 PF01926 50S ribosome-binding GTPase AKN87_04200 PF06071 Protein of unknown function (DUF933) AKN87_04205 PF00107 Zinc-binding dehydrogenase AKN87_04205 PF08240 Alcohol dehydrogenase GroES-like domain AKN87_04210 PF01343 Peptidase family S49 AKN87_04210 PF08496 Peptidase family S49 N-terminal AKN87_04230 PF14437 MafB19-like deaminase AKN87_04235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AKN87_04235 PF01565 FAD binding domain AKN87_04240 PF01451 Low molecular weight phosphotyrosine protein phosphatase AKN87_04245 PF02348 Cytidylyltransferase AKN87_04250 PF03966 Trm112p-like protein AKN87_04255 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AKN87_04260 PF03772 Competence protein AKN87_04260 PF13567 Domain of unknown function (DUF4131) AKN87_04260 PF00753 Metallo-beta-lactamase superfamily AKN87_04270 PF00291 Pyridoxal-phosphate dependent enzyme AKN87_04275 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AKN87_04280 PF00364 Biotin-requiring enzyme AKN87_04280 PF00682 HMGL-like AKN87_04280 PF02436 Conserved carboxylase domain AKN87_04285 PF04277 Oxaloacetate decarboxylase, gamma chain AKN87_04290 PF03448 MgtE intracellular N domain AKN87_04290 PF00571 CBS domain AKN87_04290 PF01769 Divalent cation transporter AKN87_04310 PF02599 Global regulator protein family AKN87_04315 PF00696 Amino acid kinase family AKN87_04315 PF01842 ACT domain AKN87_04315 PF13840 ACT domain AKN87_04320 PF02272 DHHA1 domain AKN87_04320 PF01411 tRNA synthetases class II (A) AKN87_04320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AKN87_04330 PF00202 Aminotransferase class-III AKN87_04340 PF01171 PP-loop family AKN87_04345 PF07690 Major Facilitator Superfamily AKN87_04350 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AKN87_04355 PF10415 Fumarase C C-terminus AKN87_04355 PF00206 Lyase AKN87_04365 PF00072 Response regulator receiver domain AKN87_04365 PF09456 RcsC Alpha-Beta-Loop (ABL) AKN87_04365 PF00512 His Kinase A (phospho-acceptor) domain AKN87_04365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_04375 PF02355 Protein export membrane protein AKN87_04375 PF07549 SecD/SecF GG Motif AKN87_04380 PF02355 Protein export membrane protein AKN87_04380 PF07549 SecD/SecF GG Motif AKN87_04380 PF13721 SecD export protein N-terminal TM region AKN87_04385 PF02699 Preprotein translocase subunit AKN87_04390 PF01702 Queuine tRNA-ribosyltransferase AKN87_04395 PF02547 Queuosine biosynthesis protein AKN87_04405 PF07681 DoxX AKN87_04410 PF05175 Methyltransferase small domain AKN87_04415 PF01804 Penicillin amidase AKN87_04420 PF13488 Glycine zipper AKN87_04420 PF00691 OmpA family AKN87_04425 PF01541 GIY-YIG catalytic domain AKN87_04435 PF02230 Phospholipase/Carboxylesterase AKN87_04440 PF00270 DEAD/DEAH box helicase AKN87_04440 PF00271 Helicase conserved C-terminal domain AKN87_04445 PF01259 SAICAR synthetase AKN87_04455 PF00701 Dihydrodipicolinate synthetase family AKN87_04465 PF00578 AhpC/TSA family AKN87_04470 PF01206 Sulfurtransferase TusA AKN87_04475 PF13181 Tetratricopeptide repeat AKN87_04475 PF01435 Peptidase family M48 AKN87_04480 PF03601 Conserved hypothetical protein 698 AKN87_04485 PF07690 Major Facilitator Superfamily AKN87_04490 PF04231 Endonuclease I AKN87_04500 PF03006 Haemolysin-III related AKN87_04510 PF13091 PLD-like domain AKN87_04510 PF13396 Phospholipase_D-nuclease N-terminal AKN87_04515 PF02627 Carboxymuconolactone decarboxylase family AKN87_04520 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN87_04525 PF00583 Acetyltransferase (GNAT) family AKN87_04535 PF17113 Regulatory signalling modulator protein AmpE AKN87_04535 PF03186 CobD/Cbib protein AKN87_04540 PF00155 Aminotransferase class I and II AKN87_04545 PF01497 Periplasmic binding protein AKN87_04550 PF01032 FecCD transport family AKN87_04555 PF00005 ABC transporter AKN87_04560 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AKN87_04560 PF12557 Cob(I)alamin adenosyltransferase N terminal AKN87_04565 PF07685 CobB/CobQ-like glutamine amidotransferase domain AKN87_04565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AKN87_04570 PF00881 Nitroreductase family AKN87_04595 PF02567 Phenazine biosynthesis-like protein AKN87_04605 PF03466 LysR substrate binding domain AKN87_04605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_04615 PF02653 Branched-chain amino acid transport system / permease component AKN87_04625 PF00005 ABC transporter AKN87_04630 PF12399 Branched-chain amino acid ATP-binding cassette transporter AKN87_04630 PF00005 ABC transporter AKN87_04635 PF03573 outer membrane porin, OprD family AKN87_04645 PF00501 AMP-binding enzyme AKN87_04645 PF13193 AMP-binding enzyme C-terminal domain AKN87_04650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKN87_04650 PF02770 Acyl-CoA dehydrogenase, middle domain AKN87_04650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKN87_04655 PF01039 Carboxyl transferase domain AKN87_04660 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AKN87_04660 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AKN87_04660 PF00378 Enoyl-CoA hydratase/isomerase AKN87_04665 PF02785 Biotin carboxylase C-terminal domain AKN87_04665 PF00364 Biotin-requiring enzyme AKN87_04665 PF00289 Biotin carboxylase, N-terminal domain AKN87_04665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKN87_04670 PF00682 HMGL-like AKN87_04675 PF01144 Coenzyme A transferase AKN87_04680 PF01144 Coenzyme A transferase AKN87_04685 PF13411 MerR HTH family regulatory protein AKN87_04690 PF02627 Carboxymuconolactone decarboxylase family AKN87_04705 PF05525 Branched-chain amino acid transport protein AKN87_04710 PF02629 CoA binding domain AKN87_04710 PF00549 CoA-ligase AKN87_04715 PF00549 CoA-ligase AKN87_04715 PF08442 ATP-grasp domain AKN87_04720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AKN87_04720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN87_04725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AKN87_04725 PF00364 Biotin-requiring enzyme AKN87_04725 PF02817 e3 binding domain AKN87_04730 PF16078 2-oxoglutarate dehydrogenase N-terminus AKN87_04730 PF00676 Dehydrogenase E1 component AKN87_04730 PF16870 2-oxoglutarate dehydrogenase C-terminal AKN87_04730 PF02779 Transketolase, pyrimidine binding domain AKN87_04735 PF13085 2Fe-2S iron-sulfur cluster binding domain AKN87_04740 PF00890 FAD binding domain AKN87_04740 PF02910 Fumarate reductase flavoprotein C-term AKN87_04750 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AKN87_04755 PF00285 Citrate synthase, C-terminal domain AKN87_04760 PF01852 START domain AKN87_04765 PF03692 Putative zinc- or iron-chelating domain AKN87_04770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AKN87_04770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AKN87_04780 PF00115 Cytochrome C and Quinol oxidase polypeptide I AKN87_04795 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AKN87_04795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN87_04800 PF12801 4Fe-4S binding domain AKN87_04800 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AKN87_04800 PF13746 4Fe-4S dicluster domain AKN87_04810 PF00403 Heavy-metal-associated domain AKN87_04830 PF01464 Transglycosylase SLT domain AKN87_04830 PF14718 Soluble lytic murein transglycosylase L domain AKN87_04835 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AKN87_04840 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_04845 PF00005 ABC transporter AKN87_04850 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AKN87_04860 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN87_04870 PF03358 NADPH-dependent FMN reductase AKN87_04875 PF03960 ArsC family AKN87_04880 PF08534 Redoxin AKN87_04900 PF00216 Bacterial DNA-binding protein AKN87_04905 PF01521 Iron-sulphur cluster biosynthesis AKN87_04905 PF01106 NifU-like domain AKN87_04910 PF13419 Haloacid dehalogenase-like hydrolase AKN87_04915 PF03079 ARD/ARD' family AKN87_04920 PF00596 Class II Aldolase and Adducin N-terminal domain AKN87_04930 PF01264 Chorismate synthase AKN87_04935 PF01713 Smr domain AKN87_04940 PF00180 Isocitrate/isopropylmalate dehydrogenase AKN87_04945 PF00293 NUDIX domain AKN87_04965 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AKN87_04965 PF18074 Primosomal protein N C-terminal domain AKN87_04965 PF17764 3′ DNA-binding domain (3′BD) AKN87_04965 PF00270 DEAD/DEAH box helicase AKN87_04965 PF00271 Helicase conserved C-terminal domain AKN87_04970 PF00750 tRNA synthetases class I (R) AKN87_04970 PF05746 DALR anticodon binding domain AKN87_04970 PF03485 Arginyl tRNA synthetase N terminal domain AKN87_04985 PF07715 TonB-dependent Receptor Plug Domain AKN87_04985 PF00593 TonB dependent receptor AKN87_04995 PF02654 Cobalamin-5-phosphate synthase AKN87_05005 PF02277 Phosphoribosyltransferase AKN87_05010 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AKN87_05015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AKN87_05015 PF01872 RibD C-terminal domain AKN87_05020 PF03477 ATP cone domain AKN87_05030 PF04055 Radical SAM superfamily AKN87_05030 PF01938 TRAM domain AKN87_05030 PF00919 Uncharacterized protein family UPF0004 AKN87_05040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AKN87_05040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AKN87_05045 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AKN87_05045 PF01266 FAD dependent oxidoreductase AKN87_05055 PF12833 Helix-turn-helix domain AKN87_05055 PF02311 AraC-like ligand binding domain AKN87_05065 PF17841 BID domain of Bartonella effector protein (Bep) AKN87_05065 PF02661 Fic/DOC family AKN87_05090 PF02803 Thiolase, C-terminal domain AKN87_05090 PF00108 Thiolase, N-terminal domain AKN87_05095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AKN87_05095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AKN87_05095 PF00378 Enoyl-CoA hydratase/isomerase AKN87_05100 PF00582 Universal stress protein family AKN87_05110 PF02028 BCCT, betaine/carnitine/choline family transporter AKN87_05115 PF12848 ABC transporter AKN87_05115 PF00005 ABC transporter AKN87_05115 PF16326 ABC transporter C-terminal domain AKN87_05130 PF04715 Anthranilate synthase component I, N terminal region AKN87_05130 PF00425 chorismate binding enzyme AKN87_05135 PF03969 AFG1-like ATPase AKN87_05140 PF00753 Metallo-beta-lactamase superfamily AKN87_05140 PF16123 Hydroxyacylglutathione hydrolase C-terminus AKN87_05145 PF01464 Transglycosylase SLT domain AKN87_05145 PF01476 LysM domain AKN87_05150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AKN87_05155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AKN87_05160 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_05165 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_05165 PF12911 N-terminal TM domain of oligopeptide transport permease C AKN87_05170 PF00005 ABC transporter AKN87_05170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AKN87_05180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AKN87_05190 PF03480 Bacterial extracellular solute-binding protein, family 7 AKN87_05195 PF00072 Response regulator receiver domain AKN87_05195 PF00196 Bacterial regulatory proteins, luxR family AKN87_05215 PF06628 Catalase-related immune-responsive AKN87_05215 PF00199 Catalase AKN87_05215 PF18011 C-terminal domain found in long catalases AKN87_05220 PF00793 DAHP synthetase I family AKN87_05235 PF04356 Protein of unknown function (DUF489) AKN87_05240 PF00892 EamA-like transporter family AKN87_05245 PF08328 Adenylosuccinate lyase C-terminal AKN87_05245 PF00206 Lyase AKN87_05250 PF08007 Cupin superfamily protein AKN87_05255 PF13673 Acetyltransferase (GNAT) domain AKN87_05270 PF00463 Isocitrate lyase family AKN87_05275 PF00899 ThiF family AKN87_05285 PF13847 Methyltransferase domain AKN87_05295 PF02769 AIR synthase related protein, C-terminal domain AKN87_05295 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AKN87_05295 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AKN87_05300 PF00497 Bacterial extracellular solute-binding proteins, family 3 AKN87_05300 PF01464 Transglycosylase SLT domain AKN87_05310 PF00391 PEP-utilising enzyme, mobile domain AKN87_05310 PF02896 PEP-utilising enzyme, TIM barrel domain AKN87_05310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AKN87_05315 PF03618 Kinase/pyrophosphorylase AKN87_05320 PF03458 UPF0126 domain AKN87_05325 PF01494 FAD binding domain AKN87_05340 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit AKN87_05355 PF00171 Aldehyde dehydrogenase family AKN87_05365 PF00664 ABC transporter transmembrane region AKN87_05365 PF00005 ABC transporter AKN87_05370 PF01590 GAF domain AKN87_05370 PF02954 Bacterial regulatory protein, Fis family AKN87_05370 PF00158 Sigma-54 interaction domain AKN87_05405 PF13409 Glutathione S-transferase, N-terminal domain AKN87_05415 PF01037 Lrp/AsnC ligand binding domain AKN87_05425 PF02562 PhoH-like protein AKN87_05425 PF13638 PIN domain AKN87_05430 PF01654 Cytochrome bd terminal oxidase subunit I AKN87_05435 PF02322 Cytochrome bd terminal oxidase subunit II AKN87_05440 PF03466 LysR substrate binding domain AKN87_05440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_05445 PF04341 Protein of unknown function, DUF485 AKN87_05450 PF00474 Sodium:solute symporter family AKN87_05455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AKN87_05455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AKN87_05455 PF11890 Domain of unknown function (DUF3410) AKN87_05460 PF02601 Exonuclease VII, large subunit AKN87_05460 PF13742 OB-fold nucleic acid binding domain AKN87_05465 PF01551 Peptidase family M23 AKN87_05470 PF00924 Mechanosensitive ion channel AKN87_05485 PF08502 LeuA allosteric (dimerisation) domain AKN87_05485 PF00682 HMGL-like AKN87_05490 PF04102 SlyX AKN87_05500 PF03573 outer membrane porin, OprD family AKN87_05505 PF04073 Aminoacyl-tRNA editing domain AKN87_05505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AKN87_05505 PF03129 Anticodon binding domain AKN87_05510 PF03616 Sodium/glutamate symporter AKN87_05520 PF00378 Enoyl-CoA hydratase/isomerase AKN87_05525 PF02803 Thiolase, C-terminal domain AKN87_05525 PF00108 Thiolase, N-terminal domain AKN87_05530 PF00106 short chain dehydrogenase AKN87_05535 PF13193 AMP-binding enzyme C-terminal domain AKN87_05535 PF00501 AMP-binding enzyme AKN87_05545 PF03466 LysR substrate binding domain AKN87_05545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_05550 PF00171 Aldehyde dehydrogenase family AKN87_05555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AKN87_05555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AKN87_05560 PF00378 Enoyl-CoA hydratase/isomerase AKN87_05565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKN87_05565 PF02770 Acyl-CoA dehydrogenase, middle domain AKN87_05565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKN87_05570 PF00118 TCP-1/cpn60 chaperonin family AKN87_05575 PF00166 Chaperonin 10 Kd subunit AKN87_05580 PF04186 FxsA cytoplasmic membrane protein AKN87_05585 PF07690 Major Facilitator Superfamily AKN87_05600 PF01012 Electron transfer flavoprotein domain AKN87_05600 PF00766 Electron transfer flavoprotein FAD-binding domain AKN87_05605 PF01012 Electron transfer flavoprotein domain AKN87_05615 PF03358 NADPH-dependent FMN reductase AKN87_05640 PF01850 PIN domain AKN87_05645 PF03869 Arc-like DNA binding domain AKN87_05675 PF13356 Arm DNA-binding domain AKN87_05675 PF00589 Phage integrase family AKN87_05680 PF02540 NAD synthase AKN87_05680 PF00117 Glutamine amidotransferase class-I AKN87_05680 PF00958 GMP synthase C terminal domain AKN87_05685 PF00478 IMP dehydrogenase / GMP reductase domain AKN87_05685 PF00571 CBS domain AKN87_05690 PF04386 Stringent starvation protein B AKN87_05695 PF02798 Glutathione S-transferase, N-terminal domain AKN87_05695 PF00043 Glutathione S-transferase, C-terminal domain AKN87_05700 PF02167 Cytochrome C1 family AKN87_05705 PF00033 Cytochrome b/b6/petB AKN87_05705 PF00032 Cytochrome b(C-terminal)/b6/petD AKN87_05710 PF00355 Rieske [2Fe-2S] domain AKN87_05710 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AKN87_05715 PF00380 Ribosomal protein S9/S16 AKN87_05720 PF00572 Ribosomal protein L13 AKN87_05725 PF01740 STAS domain AKN87_05725 PF00916 Sulfate permease family AKN87_05730 PF00156 Phosphoribosyl transferase domain AKN87_05740 PF00860 Permease family AKN87_05745 PF13667 ThiC-associated domain AKN87_05745 PF01964 Radical SAM ThiC family AKN87_05750 PF02321 Outer membrane efflux protein AKN87_05755 PF02562 PhoH-like protein AKN87_05760 PF02130 Uncharacterized protein family UPF0054 AKN87_05765 PF03471 Transporter associated domain AKN87_05765 PF00571 CBS domain AKN87_05770 PF00795 Carbon-nitrogen hydrolase AKN87_05790 PF13419 Haloacid dehalogenase-like hydrolase AKN87_05795 PF00589 Phage integrase family AKN87_05795 PF02899 Phage integrase, N-terminal SAM-like domain AKN87_05810 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AKN87_05810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AKN87_05820 PF01491 Frataxin-like domain AKN87_05825 PF01272 Transcription elongation factor, GreA/GreB, C-term AKN87_05825 PF14760 Rnk N-terminus AKN87_05830 PF00085 Thioredoxin AKN87_05835 PF00114 Pilin (bacterial filament) AKN87_05835 PF07963 Prokaryotic N-terminal methylation motif AKN87_05840 PF12627 Probable RNA and SrmB- binding site of polymerase A AKN87_05840 PF01743 Poly A polymerase head domain AKN87_05840 PF12626 Polymerase A arginine-rich C-terminus AKN87_05845 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AKN87_05850 PF02548 Ketopantoate hydroxymethyltransferase AKN87_05855 PF02569 Pantoate-beta-alanine ligase AKN87_05860 PF02261 Aspartate decarboxylase AKN87_05865 PF00342 Phosphoglucose isomerase AKN87_05870 PF02803 Thiolase, C-terminal domain AKN87_05870 PF00108 Thiolase, N-terminal domain AKN87_05875 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ AKN87_05885 PF02127 Aminopeptidase I zinc metalloprotease (M18) AKN87_05890 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AKN87_05895 PF03749 Sugar fermentation stimulation protein RE domain AKN87_05895 PF17746 SfsA N-terminal OB domain AKN87_05900 PF00155 Aminotransferase class I and II AKN87_05910 PF00925 GTP cyclohydrolase II AKN87_05915 PF18073 Rubredoxin metal binding domain AKN87_05925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKN87_05925 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AKN87_05935 PF01220 Dehydroquinase class II AKN87_05940 PF00364 Biotin-requiring enzyme AKN87_05945 PF00289 Biotin carboxylase, N-terminal domain AKN87_05945 PF02785 Biotin carboxylase C-terminal domain AKN87_05945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKN87_05950 PF01119 DNA mismatch repair protein, C-terminal domain AKN87_05950 PF08676 MutL C terminal dimerisation domain AKN87_05955 PF11741 AMIN domain AKN87_05955 PF01520 N-acetylmuramoyl-L-alanine amidase AKN87_05960 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AKN87_05965 PF08331 Domain of unknown function (DUF1730) AKN87_05970 PF00929 Exonuclease AKN87_05975 PF03193 RsgA GTPase AKN87_05980 PF02666 Phosphatidylserine decarboxylase AKN87_05985 PF00665 Integrase core domain AKN87_05990 PF01527 Transposase AKN87_06000 PF00227 Proteasome subunit AKN87_06005 PF07724 AAA domain (Cdc48 subfamily) AKN87_06005 PF00004 ATPase family associated with various cellular activities (AAA) AKN87_06015 PF01209 ubiE/COQ5 methyltransferase family AKN87_06025 PF03109 ABC1 family AKN87_06030 PF01502 Phosphoribosyl-AMP cyclohydrolase AKN87_06035 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AKN87_06040 PF02416 mttA/Hcf106 family AKN87_06045 PF02416 mttA/Hcf106 family AKN87_06060 PF13411 MerR HTH family regulatory protein AKN87_06065 PF00403 Heavy-metal-associated domain AKN87_06070 PF13654 AAA domain AKN87_06070 PF05362 Lon protease (S16) C-terminal proteolytic domain AKN87_06085 PF00005 ABC transporter AKN87_06095 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AKN87_06095 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AKN87_06100 PF00881 Nitroreductase family AKN87_06105 PF00762 Ferrochelatase AKN87_06110 PF01554 MatE AKN87_06115 PF00085 Thioredoxin AKN87_06120 PF05175 Methyltransferase small domain AKN87_06120 PF08468 Methyltransferase small domain N-terminal AKN87_06125 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AKN87_06125 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AKN87_06130 PF06945 Protein of unknown function (DUF1289) AKN87_06135 PF03477 ATP cone domain AKN87_06135 PF02867 Ribonucleotide reductase, barrel domain AKN87_06135 PF00317 Ribonucleotide reductase, all-alpha domain AKN87_06140 PF00268 Ribonucleotide reductase, small chain AKN87_06145 PF00111 2Fe-2S iron-sulfur cluster binding domain AKN87_06155 PF00588 SpoU rRNA Methylase family AKN87_06160 PF14765 Polyketide synthase dehydratase AKN87_06160 PF00550 Phosphopantetheine attachment site AKN87_06160 PF08659 KR domain AKN87_06160 PF08240 Alcohol dehydrogenase GroES-like domain AKN87_06160 PF00698 Acyl transferase domain AKN87_06165 PF00595 PDZ domain AKN87_06165 PF11818 C-terminal domain of tail specific protease (DUF3340) AKN87_06165 PF17804 Tail specific protease N-terminal domain AKN87_06165 PF03572 Peptidase family S41 AKN87_06185 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AKN87_06185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKN87_06205 PF04381 Putative exonuclease, RdgC AKN87_06210 PF00709 Adenylosuccinate synthetase AKN87_06215 PF13393 Histidyl-tRNA synthetase AKN87_06220 PF01145 SPFH domain / Band 7 family AKN87_06225 PF01145 SPFH domain / Band 7 family AKN87_06230 PF16360 GTP-binding GTPase Middle Region AKN87_06230 PF13167 GTP-binding GTPase N-terminal AKN87_06230 PF01926 50S ribosome-binding GTPase AKN87_06235 PF17209 Hfq protein AKN87_06250 PF06039 Malate:quinone oxidoreductase (Mqo) AKN87_06260 PF02540 NAD synthase AKN87_06260 PF00795 Carbon-nitrogen hydrolase AKN87_06265 PF02146 Sir2 family AKN87_06270 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN87_06280 PF03222 Tryptophan/tyrosine permease family AKN87_06285 PF01336 OB-fold nucleic acid binding domain AKN87_06285 PF00152 tRNA synthetases class II (D, K and N) AKN87_06290 PF03462 PCRF domain AKN87_06290 PF00472 RF-1 domain AKN87_06295 PF07963 Prokaryotic N-terminal methylation motif AKN87_06295 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AKN87_06320 PF01472 PUA domain AKN87_06320 PF00696 Amino acid kinase family AKN87_06325 PF01926 50S ribosome-binding GTPase AKN87_06325 PF01018 GTP1/OBG AKN87_06330 PF01016 Ribosomal L27 protein AKN87_06335 PF00829 Ribosomal prokaryotic L21 protein AKN87_06340 PF00348 Polyprenyl synthetase AKN87_06345 PF01741 Large-conductance mechanosensitive channel, MscL AKN87_06350 PF02445 Quinolinate synthetase A protein AKN87_06360 PF13525 Outer membrane lipoprotein AKN87_06360 PF16331 TolA binding protein trimerisation AKN87_06365 PF00691 OmpA family AKN87_06370 PF04052 TolB amino-terminal domain AKN87_06370 PF07676 WD40-like Beta Propeller Repeat AKN87_06380 PF02472 Biopolymer transport protein ExbD/TolR AKN87_06385 PF01618 MotA/TolQ/ExbB proton channel family AKN87_06390 PF03061 Thioesterase superfamily AKN87_06395 PF05496 Holliday junction DNA helicase RuvB P-loop domain AKN87_06395 PF17864 RuvB AAA lid domain AKN87_06395 PF05491 RuvB C-terminal winged helix domain AKN87_06400 PF07499 RuvA, C-terminal domain AKN87_06400 PF01330 RuvA N terminal domain AKN87_06405 PF02075 Crossover junction endodeoxyribonuclease RuvC AKN87_06410 PF01709 Transcriptional regulator AKN87_06415 PF02938 GAD domain AKN87_06415 PF00152 tRNA synthetases class II (D, K and N) AKN87_06415 PF01336 OB-fold nucleic acid binding domain AKN87_06420 PF00313 'Cold-shock' DNA-binding domain AKN87_06425 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AKN87_06425 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AKN87_06435 PF10458 Valyl tRNA synthetase tRNA binding arm AKN87_06435 PF00133 tRNA synthetases class I (I, L, M and V) AKN87_06435 PF08264 Anticodon-binding domain of tRNA AKN87_06445 PF02653 Branched-chain amino acid transport system / permease component AKN87_06450 PF00005 ABC transporter AKN87_06455 PF02080 TrkA-C domain AKN87_06455 PF03600 Citrate transporter AKN87_06460 PF05971 RNA methyltransferase AKN87_06465 PF03884 DNA gyrase inhibitor YacG AKN87_06470 PF01121 Dephospho-CoA kinase AKN87_06475 PF00218 Indole-3-glycerol phosphate synthase AKN87_06480 PF00591 Glycosyl transferase family, a/b domain AKN87_06480 PF02885 Glycosyl transferase family, helical bundle domain AKN87_06485 PF00117 Glutamine amidotransferase class-I AKN87_06490 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain AKN87_06490 PF01113 Dihydrodipicolinate reductase, N-terminus AKN87_06495 PF04715 Anthranilate synthase component I, N terminal region AKN87_06495 PF00425 chorismate binding enzyme AKN87_06500 PF13419 Haloacid dehalogenase-like hydrolase AKN87_06505 PF00834 Ribulose-phosphate 3 epimerase family AKN87_06520 PF02222 ATP-grasp domain AKN87_06520 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AKN87_06525 PF00731 AIR carboxylase AKN87_06530 PF02441 Flavoprotein AKN87_06535 PF01225 Mur ligase family, catalytic domain AKN87_06535 PF02875 Mur ligase family, glutamate ligase domain AKN87_06535 PF08245 Mur ligase middle domain AKN87_06540 PF00583 Acetyltransferase (GNAT) family AKN87_06545 PF00719 Inorganic pyrophosphatase AKN87_06550 PF02609 Exonuclease VII small subunit AKN87_06555 PF00348 Polyprenyl synthetase AKN87_06580 PF12843 Putative quorum-sensing-regulated virulence factor AKN87_06585 PF03880 DbpA RNA binding domain AKN87_06585 PF00270 DEAD/DEAH box helicase AKN87_06585 PF00271 Helicase conserved C-terminal domain AKN87_06590 PF04055 Radical SAM superfamily AKN87_06595 PF01132 Elongation factor P (EF-P) OB domain AKN87_06595 PF08207 Elongation factor P (EF-P) KOW-like domain AKN87_06595 PF09285 Elongation factor P, C-terminal AKN87_06600 PF00152 tRNA synthetases class II (D, K and N) AKN87_06615 PF00155 Aminotransferase class I and II AKN87_06625 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AKN87_06625 PF00364 Biotin-requiring enzyme AKN87_06625 PF02817 e3 binding domain AKN87_06630 PF00456 Transketolase, thiamine diphosphate binding domain AKN87_06630 PF17831 Pyruvate dehydrogenase E1 component middle domain AKN87_06635 PF08335 GlnD PII-uridylyltransferase AKN87_06635 PF03710 Glutamate-ammonia ligase adenylyltransferase AKN87_06645 PF00226 DnaJ domain AKN87_06645 PF05099 Tellurite resistance protein TerB AKN87_06650 PF00483 Nucleotidyl transferase AKN87_06655 PF01636 Phosphotransferase enzyme family AKN87_06660 PF04453 LPS transport system D AKN87_06660 PF03968 OstA-like protein AKN87_06665 PF00639 PPIC-type PPIASE domain AKN87_06665 PF09312 SurA N-terminal domain AKN87_06670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AKN87_06685 PF00005 ABC transporter AKN87_06690 PF13533 Biotin-lipoyl like AKN87_06695 PF01812 5-formyltetrahydrofolate cyclo-ligase family AKN87_06700 PF05164 Cell division protein ZapA AKN87_06710 PF03695 Uncharacterised protein family (UPF0149) AKN87_06715 PF00557 Metallopeptidase family M24 AKN87_06715 PF05195 Aminopeptidase P, N-terminal domain AKN87_06720 PF01494 FAD binding domain AKN87_06730 PF01494 FAD binding domain AKN87_06765 PF02470 MlaD protein AKN87_06770 PF00005 ABC transporter AKN87_06775 PF02405 Permease MlaE AKN87_06780 PF03989 DNA gyrase C-terminal domain, beta-propeller AKN87_06780 PF00521 DNA gyrase/topoisomerase IV, subunit A AKN87_06790 PF00204 DNA gyrase B AKN87_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_06790 PF01751 Toprim domain AKN87_06790 PF00986 DNA gyrase B subunit, carboxyl terminus AKN87_06795 PF05728 Uncharacterised protein family (UPF0227) AKN87_06800 PF00149 Calcineurin-like phosphoesterase AKN87_06805 PF02578 Multi-copper polyphenol oxidoreductase laccase AKN87_06810 PF00849 RNA pseudouridylate synthase AKN87_06810 PF01479 S4 domain AKN87_06815 PF13525 Outer membrane lipoprotein AKN87_06820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKN87_06825 PF00871 Acetokinase family AKN87_06830 PF07085 DRTGG domain AKN87_06830 PF01515 Phosphate acetyl/butaryl transferase AKN87_06835 PF01553 Acyltransferase AKN87_06840 PF05681 Fumarate hydratase (Fumerase) AKN87_06840 PF05683 Fumarase C-terminus AKN87_06850 PF04287 tRNA pseudouridine synthase C AKN87_06870 PF00293 NUDIX domain AKN87_06880 PF00679 Elongation factor G C-terminus AKN87_06880 PF00009 Elongation factor Tu GTP binding domain AKN87_06880 PF03144 Elongation factor Tu domain 2 AKN87_06885 PF02568 Thiamine biosynthesis protein (ThiI) AKN87_06885 PF02926 THUMP domain AKN87_06890 PF00120 Glutamine synthetase, catalytic domain AKN87_06890 PF03951 Glutamine synthetase, beta-Grasp domain AKN87_06900 PF05199 GMC oxidoreductase AKN87_06900 PF00732 GMC oxidoreductase AKN87_06905 PF00171 Aldehyde dehydrogenase family AKN87_06910 PF02028 BCCT, betaine/carnitine/choline family transporter AKN87_06915 PF01895 PhoU domain AKN87_06920 PF00005 ABC transporter AKN87_06925 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_06930 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_06935 PF12849 PBP superfamily domain AKN87_06945 PF01761 3-dehydroquinate synthase AKN87_06950 PF01202 Shikimate kinase AKN87_06955 PF01527 Transposase AKN87_06970 PF00905 Penicillin binding protein transpeptidase domain AKN87_06970 PF00912 Transglycosylase AKN87_06970 PF17092 Penicillin-binding protein OB-like domain AKN87_06975 PF03949 Malic enzyme, NAD binding domain AKN87_06975 PF00390 Malic enzyme, N-terminal domain AKN87_06980 PF01197 Ribosomal protein L31 AKN87_06985 PF17941 Polyphosphate kinase C-terminal domain 1 AKN87_06985 PF13090 Polyphosphate kinase C-terminal domain 2 AKN87_06985 PF02503 Polyphosphate kinase middle domain AKN87_06985 PF13089 Polyphosphate kinase N-terminal domain AKN87_07015 PF00529 HlyD membrane-fusion protein of T1SS AKN87_07015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AKN87_07020 PF00664 ABC transporter transmembrane region AKN87_07020 PF00005 ABC transporter AKN87_07020 PF03412 Peptidase C39 family AKN87_07040 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AKN87_07040 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AKN87_07045 PF00034 Cytochrome c AKN87_07050 PF01926 50S ribosome-binding GTPase AKN87_07055 PF01734 Patatin-like phospholipase AKN87_07060 PF13614 AAA domain AKN87_07065 PF03796 DnaB-like helicase C terminal domain AKN87_07065 PF00772 DnaB-like helicase N terminal domain AKN87_07125 PF00436 Single-strand binding protein family AKN87_07130 PF01751 Toprim domain AKN87_07130 PF01131 DNA topoisomerase AKN87_07135 PF08281 Sigma-70, region 4 AKN87_07135 PF12680 SnoaL-like domain AKN87_07135 PF04542 Sigma-70 region 2 AKN87_07145 PF07715 TonB-dependent Receptor Plug Domain AKN87_07155 PF00581 Rhodanese-like domain AKN87_07285 PF00145 C-5 cytosine-specific DNA methylase AKN87_07310 PF07690 Major Facilitator Superfamily AKN87_07320 PF02661 Fic/DOC family AKN87_07320 PF13784 Fic/DOC family N-terminal AKN87_07325 PF01588 Putative tRNA binding domain AKN87_07330 PF00394 Multicopper oxidase AKN87_07330 PF07731 Multicopper oxidase AKN87_07330 PF07732 Multicopper oxidase AKN87_07395 PF02599 Global regulator protein family AKN87_07400 PF00175 Oxidoreductase NAD-binding domain AKN87_07400 PF00042 Globin AKN87_07400 PF00970 Oxidoreductase FAD-binding domain AKN87_07405 PF02082 Transcriptional regulator AKN87_07440 PF01725 Ham1 family AKN87_07445 PF00962 Adenosine/AMP deaminase AKN87_07480 PF18495 Antitoxin VbhA AKN87_07490 PF00589 Phage integrase family AKN87_07490 PF02899 Phage integrase, N-terminal SAM-like domain AKN87_07505 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_07510 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_07515 PF00497 Bacterial extracellular solute-binding proteins, family 3 AKN87_07520 PF00005 ABC transporter AKN87_07525 PF01557 Fumarylacetoacetate (FAA) hydrolase family AKN87_07530 PF02913 FAD linked oxidases, C-terminal domain AKN87_07530 PF01565 FAD binding domain AKN87_07535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AKN87_07535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AKN87_07540 PF00436 Single-strand binding protein family AKN87_07545 PF07690 Major Facilitator Superfamily AKN87_07550 PF17755 UvrA DNA-binding domain AKN87_07550 PF17760 UvrA interaction domain AKN87_07555 PF00199 Catalase AKN87_07555 PF06628 Catalase-related immune-responsive AKN87_07565 PF02492 CobW/HypB/UreG, nucleotide-binding domain AKN87_07565 PF07683 Cobalamin synthesis protein cobW C-terminal domain AKN87_07575 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AKN87_07575 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AKN87_07580 PF01810 LysE type translocator AKN87_07585 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN87_07590 PF00842 Alanine racemase, C-terminal domain AKN87_07590 PF01168 Alanine racemase, N-terminal domain AKN87_07595 PF01266 FAD dependent oxidoreductase AKN87_07600 PF01037 Lrp/AsnC ligand binding domain AKN87_07605 PF00471 Ribosomal protein L33 AKN87_07610 PF00830 Ribosomal L28 family AKN87_07615 PF04002 RadC-like JAB domain AKN87_07620 PF02441 Flavoprotein AKN87_07620 PF04127 DNA / pantothenate metabolism flavoprotein AKN87_07625 PF00692 dUTPase AKN87_07630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AKN87_07630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AKN87_07630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AKN87_07630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AKN87_07635 PF00696 Amino acid kinase family AKN87_07645 PF00186 Dihydrofolate reductase AKN87_07655 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AKN87_07655 PF01926 50S ribosome-binding GTPase AKN87_07660 PF00210 Ferritin-like domain AKN87_07665 PF04324 BFD-like [2Fe-2S] binding domain AKN87_07680 PF00293 NUDIX domain AKN87_07685 PF00391 PEP-utilising enzyme, mobile domain AKN87_07685 PF02896 PEP-utilising enzyme, TIM barrel domain AKN87_07685 PF05524 PEP-utilising enzyme, N-terminal AKN87_07685 PF01590 GAF domain AKN87_07690 PF04452 RNA methyltransferase AKN87_07700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKN87_07700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKN87_07700 PF02770 Acyl-CoA dehydrogenase, middle domain AKN87_07725 PF00005 ABC transporter AKN87_07730 PF01032 FecCD transport family AKN87_07735 PF01032 FecCD transport family AKN87_07740 PF01497 Periplasmic binding protein AKN87_07745 PF05690 Thiazole biosynthesis protein ThiG AKN87_07755 PF03601 Conserved hypothetical protein 698 AKN87_07765 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AKN87_07765 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AKN87_07775 PF03480 Bacterial extracellular solute-binding protein, family 7 AKN87_07780 PF00155 Aminotransferase class I and II AKN87_07780 PF00392 Bacterial regulatory proteins, gntR family AKN87_07785 PF01266 FAD dependent oxidoreductase AKN87_07795 PF12556 Cobaltochelatase CobS subunit N terminal AKN87_07795 PF08406 CbbQ/NirQ/NorQ C-terminal AKN87_07795 PF07728 AAA domain (dynein-related subfamily) AKN87_07800 PF11775 Cobalamin biosynthesis protein CobT VWA domain AKN87_07800 PF06213 Cobalamin biosynthesis protein CobT AKN87_07815 PF01925 Sulfite exporter TauE/SafE AKN87_07820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AKN87_07820 PF00205 Thiamine pyrophosphate enzyme, central domain AKN87_07820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AKN87_07825 PF09339 IclR helix-turn-helix domain AKN87_07825 PF01614 Bacterial transcriptional regulator AKN87_07835 PF00593 TonB dependent receptor AKN87_07835 PF07715 TonB-dependent Receptor Plug Domain AKN87_07840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_07840 PF03466 LysR substrate binding domain AKN87_07845 PF01266 FAD dependent oxidoreductase AKN87_07850 PF01042 Endoribonuclease L-PSP AKN87_07855 PF01168 Alanine racemase, N-terminal domain AKN87_07855 PF00842 Alanine racemase, C-terminal domain AKN87_07860 PF00202 Aminotransferase class-III AKN87_07865 PF00171 Aldehyde dehydrogenase family AKN87_07870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AKN87_07870 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AKN87_07880 PF03480 Bacterial extracellular solute-binding protein, family 7 AKN87_07890 PF00465 Iron-containing alcohol dehydrogenase AKN87_07895 PF00270 DEAD/DEAH box helicase AKN87_07895 PF00271 Helicase conserved C-terminal domain AKN87_07895 PF17191 RecG wedge domain AKN87_07900 PF03466 LysR substrate binding domain AKN87_07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_07915 PF03222 Tryptophan/tyrosine permease family AKN87_07920 PF00884 Sulfatase AKN87_07925 PF04055 Radical SAM superfamily AKN87_07925 PF06463 Molybdenum Cofactor Synthesis C AKN87_07935 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_07940 PF03459 TOBE domain AKN87_07940 PF00005 ABC transporter AKN87_07955 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_07960 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_07965 PF08402 TOBE domain AKN87_07965 PF00005 ABC transporter AKN87_07970 PF13416 Bacterial extracellular solute-binding protein AKN87_07975 PF13416 Bacterial extracellular solute-binding protein AKN87_07980 PF01322 Cytochrome C' AKN87_07985 PF04972 BON domain AKN87_07985 PF01476 LysM domain AKN87_07990 PF05199 GMC oxidoreductase AKN87_07990 PF00732 GMC oxidoreductase AKN87_08000 PF00171 Aldehyde dehydrogenase family AKN87_08010 PF02773 S-adenosylmethionine synthetase, C-terminal domain AKN87_08010 PF02772 S-adenosylmethionine synthetase, central domain AKN87_08010 PF00438 S-adenosylmethionine synthetase, N-terminal domain AKN87_08020 PF01479 S4 domain AKN87_08025 PF02556 Preprotein translocase subunit SecB AKN87_08030 PF00462 Glutaredoxin AKN87_08035 PF00581 Rhodanese-like domain AKN87_08040 PF01676 Metalloenzyme superfamily AKN87_08040 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AKN87_08045 PF01551 Peptidase family M23 AKN87_08050 PF13180 PDZ domain AKN87_08050 PF03572 Peptidase family S41 AKN87_08060 PF00977 Histidine biosynthesis protein AKN87_08065 PF00977 Histidine biosynthesis protein AKN87_08070 PF00117 Glutamine amidotransferase class-I AKN87_08075 PF00475 Imidazoleglycerol-phosphate dehydratase AKN87_08090 PF10576 Iron-sulfur binding domain of endonuclease III AKN87_08090 PF14815 NUDIX domain AKN87_08090 PF00730 HhH-GPD superfamily base excision DNA repair protein AKN87_08090 PF00633 Helix-hairpin-helix motif AKN87_08095 PF04362 Bacterial Fe(2+) trafficking AKN87_08110 PF00034 Cytochrome c AKN87_08110 PF03150 Di-haem cytochrome c peroxidase AKN87_08120 PF03060 Nitronate monooxygenase AKN87_08125 PF04264 YceI-like domain AKN87_08130 PF01292 Prokaryotic cytochrome b561 AKN87_08135 PF00127 Copper binding proteins, plastocyanin/azurin family AKN87_08140 PF00210 Ferritin-like domain AKN87_08145 PF01116 Fructose-bisphosphate aldolase class-II AKN87_08150 PF00162 Phosphoglycerate kinase AKN87_08155 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AKN87_08155 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AKN87_08160 PF00456 Transketolase, thiamine diphosphate binding domain AKN87_08160 PF02779 Transketolase, pyrimidine binding domain AKN87_08160 PF02780 Transketolase, C-terminal domain AKN87_08165 PF00156 Phosphoribosyl transferase domain AKN87_08170 PF06968 Biotin and Thiamin Synthesis associated domain AKN87_08170 PF04055 Radical SAM superfamily AKN87_08175 PF00155 Aminotransferase class I and II AKN87_08180 PF12697 Alpha/beta hydrolase family AKN87_08180 PF08241 Methyltransferase domain AKN87_08185 PF08241 Methyltransferase domain AKN87_08200 PF03453 MoeA N-terminal region (domain I and II) AKN87_08200 PF00994 Probable molybdopterin binding domain AKN87_08200 PF03454 MoeA C-terminal region (domain IV) AKN87_08205 PF00994 Probable molybdopterin binding domain AKN87_08210 PF12804 MobA-like NTP transferase domain AKN87_08215 PF01967 MoaC family AKN87_08225 PF00156 Phosphoribosyl transferase domain AKN87_08235 PF03755 YicC-like family, N-terminal region AKN87_08235 PF08340 Domain of unknown function (DUF1732) AKN87_08240 PF09905 DNA-binding protein VF530 AKN87_08245 PF01138 3' exoribonuclease family, domain 1 AKN87_08245 PF03725 3' exoribonuclease family, domain 2 AKN87_08275 PF03480 Bacterial extracellular solute-binding protein, family 7 AKN87_08280 PF13361 UvrD-like helicase C-terminal domain AKN87_08280 PF00580 UvrD/REP helicase N-terminal domain AKN87_08285 PF16325 Peptidase family U32 C-terminal domain AKN87_08285 PF01136 Peptidase family U32 AKN87_08295 PF00501 AMP-binding enzyme AKN87_08295 PF13193 AMP-binding enzyme C-terminal domain AKN87_08300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AKN87_08300 PF00384 Molybdopterin oxidoreductase AKN87_08300 PF01568 Molydopterin dinucleotide binding domain AKN87_08305 PF03916 Polysulphide reductase, NrfD AKN87_08310 PF13247 4Fe-4S dicluster domain AKN87_08315 PF02386 Cation transport protein AKN87_08320 PF02254 TrkA-N domain AKN87_08320 PF02080 TrkA-C domain AKN87_08325 PF01189 16S rRNA methyltransferase RsmB/F AKN87_08325 PF01029 NusB family AKN87_08330 PF02911 Formyl transferase, C-terminal domain AKN87_08330 PF00551 Formyl transferase AKN87_08335 PF01327 Polypeptide deformylase AKN87_08345 PF02481 DNA recombination-mediator protein A AKN87_08345 PF17782 DprA winged helix domain AKN87_08350 PF01300 Telomere recombination AKN87_08355 PF01218 Coproporphyrinogen III oxidase AKN87_08360 PF01488 Shikimate / quinate 5-dehydrogenase AKN87_08360 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AKN87_08360 PF08501 Shikimate dehydrogenase substrate binding domain AKN87_08365 PF03448 MgtE intracellular N domain AKN87_08365 PF01769 Divalent cation transporter AKN87_08365 PF00571 CBS domain AKN87_08370 PF02308 MgtC family AKN87_08375 PF02374 Anion-transporting ATPase AKN87_08375 PF17886 HSP20-like domain found in ArsA AKN87_08385 PF02554 Carbon starvation protein CstA AKN87_08385 PF13722 5TM C-terminal transporter carbon starvation CstA AKN87_08405 PF00202 Aminotransferase class-III AKN87_08410 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AKN87_08410 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AKN87_08410 PF06827 Zinc finger found in FPG and IleRS AKN87_08415 PF01925 Sulfite exporter TauE/SafE AKN87_08420 PF01790 Prolipoprotein diacylglyceryl transferase AKN87_08425 PF00303 Thymidylate synthase AKN87_08445 PF02036 SCP-2 sterol transfer family AKN87_08450 PF01136 Peptidase family U32 AKN87_08455 PF01136 Peptidase family U32 AKN87_08460 PF00962 Adenosine/AMP deaminase AKN87_08475 PF01653 NAD-dependent DNA ligase adenylation domain AKN87_08475 PF03120 NAD-dependent DNA ligase OB-fold domain AKN87_08490 PF00291 Pyridoxal-phosphate dependent enzyme AKN87_08490 PF00585 C-terminal regulatory domain of Threonine dehydratase AKN87_08495 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AKN87_08500 PF17763 Glutaminase/Asparaginase C-terminal domain AKN87_08500 PF00710 Asparaginase, N-terminal AKN87_08505 PF00892 EamA-like transporter family AKN87_08530 PF00005 ABC transporter AKN87_08530 PF00664 ABC transporter transmembrane region AKN87_08535 PF01368 DHH family AKN87_08535 PF01743 Poly A polymerase head domain AKN87_08535 PF12627 Probable RNA and SrmB- binding site of polymerase A AKN87_08535 PF00571 CBS domain AKN87_08535 PF02272 DHHA1 domain AKN87_08545 PF13411 MerR HTH family regulatory protein AKN87_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_08560 PF03466 LysR substrate binding domain AKN87_08565 PF03060 Nitronate monooxygenase AKN87_08580 PF01380 SIS domain AKN87_08585 PF00920 Dehydratase family AKN87_08600 PF03594 Benzoate membrane transport protein AKN87_08605 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_08610 PF08669 Glycine cleavage T-protein C-terminal barrel domain AKN87_08610 PF01571 Aminomethyltransferase folate-binding domain AKN87_08615 PF01597 Glycine cleavage H-protein AKN87_08620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AKN87_08620 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AKN87_08630 PF03480 Bacterial extracellular solute-binding protein, family 7 AKN87_08650 PF05193 Peptidase M16 inactive domain AKN87_08655 PF00675 Insulinase (Peptidase family M16) AKN87_08655 PF05193 Peptidase M16 inactive domain AKN87_08665 PF00448 SRP54-type protein, GTPase domain AKN87_08665 PF02881 SRP54-type protein, helical bundle domain AKN87_08670 PF00005 ABC transporter AKN87_08675 PF18075 FtsX extracellular domain AKN87_08680 PF04545 Sigma-70, region 4 AKN87_08680 PF00140 Sigma-70 factor, region 1.2 AKN87_08680 PF04542 Sigma-70 region 2 AKN87_08685 PF03956 Lysine exporter LysO AKN87_08690 PF00324 Amino acid permease AKN87_08695 PF00580 UvrD/REP helicase N-terminal domain AKN87_08695 PF13361 UvrD-like helicase C-terminal domain AKN87_08700 PF02028 BCCT, betaine/carnitine/choline family transporter AKN87_08705 PF00271 Helicase conserved C-terminal domain AKN87_08705 PF00270 DEAD/DEAH box helicase AKN87_08710 PF02219 Methylenetetrahydrofolate reductase AKN87_08715 PF05221 S-adenosyl-L-homocysteine hydrolase AKN87_08715 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AKN87_08730 PF01527 Transposase AKN87_08735 PF00665 Integrase core domain AKN87_08770 PF07670 Nucleoside recognition AKN87_08775 PF01510 N-acetylmuramoyl-L-alanine amidase AKN87_08785 PF12804 MobA-like NTP transferase domain AKN87_08785 PF00132 Bacterial transferase hexapeptide (six repeats) AKN87_08790 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AKN87_08790 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AKN87_08795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AKN87_08795 PF02874 ATP synthase alpha/beta family, beta-barrel domain AKN87_08800 PF00231 ATP synthase AKN87_08805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AKN87_08805 PF00306 ATP synthase alpha/beta chain, C terminal domain AKN87_08805 PF02874 ATP synthase alpha/beta family, beta-barrel domain AKN87_08810 PF00213 ATP synthase delta (OSCP) subunit AKN87_08815 PF00430 ATP synthase B/B' CF(0) AKN87_08820 PF00137 ATP synthase subunit C AKN87_08825 PF00119 ATP synthase A chain AKN87_08830 PF03899 ATP synthase I chain AKN87_08835 PF02195 ParB-like nuclease domain AKN87_08835 PF17762 HTH domain found in ParB protein AKN87_08840 PF13614 AAA domain AKN87_08845 PF02527 rRNA small subunit methyltransferase G AKN87_08850 PF01134 Glucose inhibited division protein A AKN87_08850 PF13932 GidA associated domain AKN87_08855 PF01926 50S ribosome-binding GTPase AKN87_08855 PF12631 MnmE helical domain AKN87_08855 PF10396 GTP-binding protein TrmE N-terminus AKN87_08860 PF14849 YidC periplasmic domain AKN87_08860 PF02096 60Kd inner membrane protein AKN87_08865 PF01809 Putative membrane protein insertion efficiency factor AKN87_08870 PF00825 Ribonuclease P AKN87_08875 PF00468 Ribosomal protein L34 AKN87_08880 PF10011 Predicted membrane protein (DUF2254) AKN87_08885 PF09278 MerR, DNA binding AKN87_08885 PF00376 MerR family regulatory protein AKN87_08890 PF00403 Heavy-metal-associated domain AKN87_08905 PF00892 EamA-like transporter family AKN87_08910 PF00132 Bacterial transferase hexapeptide (six repeats) AKN87_08915 PF01432 Peptidase family M3 AKN87_08925 PF01192 RNA polymerase Rpb6 AKN87_08930 PF02824 TGS domain AKN87_08930 PF04607 Region found in RelA / SpoT proteins AKN87_08930 PF13291 ACT domain AKN87_08935 PF01042 Endoribonuclease L-PSP AKN87_08940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN87_08945 PF02630 SCO1/SenC AKN87_08950 PF01636 Phosphotransferase enzyme family AKN87_08960 PF04241 Protein of unknown function (DUF423) AKN87_08965 PF05690 Thiazole biosynthesis protein ThiG AKN87_08965 PF02597 ThiS family AKN87_08970 PF05690 Thiazole biosynthesis protein ThiG AKN87_08975 PF02390 Putative methyltransferase AKN87_08980 PF00625 Guanylate kinase AKN87_08995 PF01926 50S ribosome-binding GTPase AKN87_08995 PF07650 KH domain AKN87_09000 PF03600 Citrate transporter AKN87_09010 PF00175 Oxidoreductase NAD-binding domain AKN87_09015 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AKN87_09020 PF07497 Rho termination factor, RNA-binding domain AKN87_09020 PF07498 Rho termination factor, N-terminal domain AKN87_09020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AKN87_09025 PF00085 Thioredoxin AKN87_09030 PF02541 Ppx/GppA phosphatase family AKN87_09040 PF08299 Bacterial dnaA protein helix-turn-helix AKN87_09040 PF00308 Bacterial dnaA protein AKN87_09040 PF11638 DnaA N-terminal domain AKN87_09045 PF00712 DNA polymerase III beta subunit, N-terminal domain AKN87_09045 PF02767 DNA polymerase III beta subunit, central domain AKN87_09045 PF02768 DNA polymerase III beta subunit, C-terminal domain AKN87_09050 PF02463 RecF/RecN/SMC N terminal domain AKN87_09055 PF01751 Toprim domain AKN87_09055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_09055 PF18053 DNA gyrase B subunit insert domain AKN87_09055 PF00986 DNA gyrase B subunit, carboxyl terminus AKN87_09055 PF00204 DNA gyrase B AKN87_09060 PF00512 His Kinase A (phospho-acceptor) domain AKN87_09060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_09060 PF08521 Two-component sensor kinase N-terminal AKN87_09065 PF00486 Transcriptional regulatory protein, C terminal AKN87_09065 PF00072 Response regulator receiver domain AKN87_09070 PF11412 Disulphide bond corrector protein DsbC AKN87_09070 PF02683 Cytochrome C biogenesis protein transmembrane region AKN87_09075 PF00578 AhpC/TSA family AKN87_09080 PF13098 Thioredoxin-like domain AKN87_09085 PF00290 Tryptophan synthase alpha chain AKN87_09090 PF00291 Pyridoxal-phosphate dependent enzyme AKN87_09095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_09095 PF03466 LysR substrate binding domain AKN87_09100 PF12806 Acetyl-CoA dehydrogenase C-terminal like AKN87_09100 PF02770 Acyl-CoA dehydrogenase, middle domain AKN87_09100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKN87_09100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKN87_09110 PF01208 Uroporphyrinogen decarboxylase (URO-D) AKN87_09115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_09115 PF03466 LysR substrate binding domain AKN87_09120 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AKN87_09130 PF01292 Prokaryotic cytochrome b561 AKN87_09135 PF12805 FUSC-like inner membrane protein yccS AKN87_09140 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AKN87_09140 PF18381 YcaO cyclodehydratase C-terminal domain AKN87_09145 PF12833 Helix-turn-helix domain AKN87_09145 PF02311 AraC-like ligand binding domain AKN87_09150 PF13593 SBF-like CPA transporter family (DUF4137) AKN87_09155 PF02597 ThiS family AKN87_09160 PF02391 MoaE protein AKN87_09165 PF03453 MoeA N-terminal region (domain I and II) AKN87_09165 PF03454 MoeA C-terminal region (domain IV) AKN87_09165 PF00994 Probable molybdopterin binding domain AKN87_09170 PF01258 Prokaryotic dksA/traR C4-type zinc finger AKN87_09175 PF03459 TOBE domain AKN87_09175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_09180 PF08521 Two-component sensor kinase N-terminal AKN87_09180 PF00512 His Kinase A (phospho-acceptor) domain AKN87_09185 PF00486 Transcriptional regulatory protein, C terminal AKN87_09185 PF00072 Response regulator receiver domain AKN87_09190 PF00884 Sulfatase AKN87_09205 PF01804 Penicillin amidase AKN87_09220 PF01026 TatD related DNase AKN87_09225 PF16658 Class II release factor RF3, C-terminal domain AKN87_09225 PF03144 Elongation factor Tu domain 2 AKN87_09225 PF00009 Elongation factor Tu GTP binding domain AKN87_09230 PF01863 Protein of unknown function DUF45 AKN87_09235 PF00011 Hsp20/alpha crystallin family AKN87_09240 PF00593 TonB dependent receptor AKN87_09240 PF07715 TonB-dependent Receptor Plug Domain AKN87_09245 PF00009 Elongation factor Tu GTP binding domain AKN87_09250 PF01507 Phosphoadenosine phosphosulfate reductase family AKN87_09255 PF01507 Phosphoadenosine phosphosulfate reductase family AKN87_09260 PF14824 Sirohaem biosynthesis protein central AKN87_09260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AKN87_09260 PF10414 Sirohaem synthase dimerisation region AKN87_09265 PF00392 Bacterial regulatory proteins, gntR family AKN87_09265 PF00155 Aminotransferase class I and II AKN87_09270 PF00266 Aminotransferase class-V AKN87_09275 PF01168 Alanine racemase, N-terminal domain AKN87_09280 PF00202 Aminotransferase class-III AKN87_09285 PF00464 Serine hydroxymethyltransferase AKN87_09295 PF01502 Phosphoribosyl-AMP cyclohydrolase AKN87_09300 PF01979 Amidohydrolase family AKN87_09305 PF03129 Anticodon binding domain AKN87_09305 PF02824 TGS domain AKN87_09305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AKN87_09305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AKN87_09310 PF01527 Transposase AKN87_09315 PF00665 Integrase core domain AKN87_09320 PF03129 Anticodon binding domain AKN87_09320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AKN87_09320 PF02824 TGS domain AKN87_09320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AKN87_09330 PF01809 Putative membrane protein insertion efficiency factor AKN87_09335 PF09190 DALR domain AKN87_09335 PF01406 tRNA synthetases class I (C) catalytic domain AKN87_09345 PF02649 Type I GTP cyclohydrolase folE2 AKN87_09350 PF02492 CobW/HypB/UreG, nucleotide-binding domain AKN87_09350 PF07683 Cobalamin synthesis protein cobW C-terminal domain AKN87_09370 PF00583 Acetyltransferase (GNAT) family AKN87_09370 PF00696 Amino acid kinase family AKN87_09375 PF01384 Phosphate transporter family AKN87_09380 PF01865 Protein of unknown function DUF47 AKN87_09390 PF16200 C-terminal region of band_7 AKN87_09390 PF01145 SPFH domain / Band 7 family AKN87_09405 PF01323 DSBA-like thioredoxin domain AKN87_09415 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AKN87_09415 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AKN87_09420 PF02622 Uncharacterized ACR, COG1678 AKN87_09425 PF03652 Holliday junction resolvase AKN87_09430 PF00156 Phosphoribosyl transferase domain AKN87_09435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AKN87_09435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AKN87_09440 PF01979 Amidohydrolase family AKN87_09445 PF17785 PUA-like domain AKN87_09445 PF10672 S-adenosylmethionine-dependent methyltransferase AKN87_09450 PF06977 SdiA-regulated AKN87_09455 PF00459 Inositol monophosphatase family AKN87_09460 PF00293 NUDIX domain AKN87_09465 PF13419 Haloacid dehalogenase-like hydrolase AKN87_09470 PF01292 Prokaryotic cytochrome b561 AKN87_09475 PF00437 Type II/IV secretion system protein AKN87_09480 PF01168 Alanine racemase, N-terminal domain AKN87_09485 PF14748 Pyrroline-5-carboxylate reductase dimerisation AKN87_09485 PF03807 NADP oxidoreductase coenzyme F420-dependent AKN87_09490 PF02325 YGGT family AKN87_09495 PF02594 Uncharacterised ACR, YggU family COG1872 AKN87_09500 PF00561 alpha/beta hydrolase fold AKN87_09505 PF00561 alpha/beta hydrolase fold AKN87_09505 PF07021 Methionine biosynthesis protein MetW AKN87_09515 PF01725 Ham1 family AKN87_09520 PF06969 HemN C-terminal domain AKN87_09520 PF04055 Radical SAM superfamily AKN87_09525 PF01553 Acyltransferase AKN87_09525 PF00501 AMP-binding enzyme AKN87_09535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_09535 PF03466 LysR substrate binding domain AKN87_09540 PF02525 Flavodoxin-like fold AKN87_09545 PF05726 Pirin C-terminal cupin domain AKN87_09545 PF02678 Pirin AKN87_09550 PF01467 Cytidylyltransferase-like AKN87_09555 PF00037 4Fe-4S binding domain AKN87_09570 PF02091 Glycyl-tRNA synthetase alpha subunit AKN87_09575 PF02092 Glycyl-tRNA synthetase beta subunit AKN87_09575 PF05746 DALR anticodon binding domain AKN87_09600 PF00543 Nitrogen regulatory protein P-II AKN87_09605 PF00512 His Kinase A (phospho-acceptor) domain AKN87_09605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_09605 PF00989 PAS fold AKN87_09605 PF11808 Phosphate regulon sensor protein PhoR AKN87_09610 PF00486 Transcriptional regulatory protein, C terminal AKN87_09610 PF00072 Response regulator receiver domain AKN87_09615 PF01040 UbiA prenyltransferase family AKN87_09620 PF04345 Chorismate lyase AKN87_09625 PF18113 Rubredoxin binding C-terminal domain AKN87_09625 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN87_09635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN87_09640 PF00034 Cytochrome c AKN87_09645 PF01078 Magnesium chelatase, subunit ChlI AKN87_09645 PF13335 Magnesium chelatase, subunit ChlI C-terminal AKN87_09650 PF04380 Membrane fusogenic activity AKN87_09660 PF00106 short chain dehydrogenase AKN87_09665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AKN87_09665 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AKN87_09670 PF00667 FAD binding domain AKN87_09670 PF00175 Oxidoreductase NAD-binding domain AKN87_09670 PF00258 Flavodoxin AKN87_09690 PF07715 TonB-dependent Receptor Plug Domain AKN87_09690 PF00593 TonB dependent receptor AKN87_09700 PF00512 His Kinase A (phospho-acceptor) domain AKN87_09700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_09705 PF00072 Response regulator receiver domain AKN87_09705 PF02954 Bacterial regulatory protein, Fis family AKN87_09710 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AKN87_09720 PF01435 Peptidase family M48 AKN87_09730 PF16363 GDP-mannose 4,6 dehydratase AKN87_09735 PF03922 OmpW family AKN87_09740 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AKN87_09745 PF02580 D-Tyr-tRNA(Tyr) deacylase AKN87_09750 PF00464 Serine hydroxymethyltransferase AKN87_09755 PF00005 ABC transporter AKN87_09755 PF12848 ABC transporter AKN87_09760 PF00171 Aldehyde dehydrogenase family AKN87_09765 PF04262 Glutamate-cysteine ligase AKN87_09770 PF16921 Tex protein YqgF-like domain AKN87_09770 PF09371 Tex-like protein N-terminal domain AKN87_09770 PF00575 S1 RNA binding domain AKN87_09770 PF17674 HHH domain AKN87_09775 PF00486 Transcriptional regulatory protein, C terminal AKN87_09775 PF00072 Response regulator receiver domain AKN87_09780 PF00512 His Kinase A (phospho-acceptor) domain AKN87_09780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_09780 PF00672 HAMP domain AKN87_09785 PF01297 Zinc-uptake complex component A periplasmic AKN87_09790 PF01475 Ferric uptake regulator family AKN87_09795 PF00005 ABC transporter AKN87_09800 PF00950 ABC 3 transport family AKN87_09810 PF00005 ABC transporter AKN87_09810 PF09383 NIL domain AKN87_09815 PF00528 Binding-protein-dependent transport system inner membrane component AKN87_09820 PF03180 NLPA lipoprotein AKN87_09825 PF02566 OsmC-like protein AKN87_09830 PF02675 S-adenosylmethionine decarboxylase AKN87_09835 PF03232 Ubiquinone biosynthesis protein COQ7 AKN87_09840 PF01230 HIT domain AKN87_09845 PF03653 Uncharacterised protein family (UPF0093) AKN87_09850 PF02774 Semialdehyde dehydrogenase, dimerisation domain AKN87_09850 PF01118 Semialdehyde dehydrogenase, NAD binding domain AKN87_09855 PF01521 Iron-sulphur cluster biosynthesis AKN87_09860 PF03702 Anhydro-N-acetylmuramic acid kinase AKN87_09865 PF01551 Peptidase family M23 AKN87_09865 PF04225 Opacity-associated protein A LysM-like domain AKN87_09870 PF01479 S4 domain AKN87_09870 PF00579 tRNA synthetases class I (W and Y) AKN87_09900 PF03099 Biotin/lipoate A/B protein ligase family AKN87_09900 PF02237 Biotin protein ligase C terminal domain AKN87_09905 PF03309 Type III pantothenate kinase AKN87_09930 PF03143 Elongation factor Tu C-terminal domain AKN87_09930 PF03144 Elongation factor Tu domain 2 AKN87_09930 PF00009 Elongation factor Tu GTP binding domain AKN87_09940 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AKN87_09945 PF02357 Transcription termination factor nusG AKN87_09945 PF00467 KOW motif AKN87_09950 PF00298 Ribosomal protein L11, RNA binding domain AKN87_09950 PF03946 Ribosomal protein L11, N-terminal domain AKN87_09955 PF00687 Ribosomal protein L1p/L10e family AKN87_09960 PF00466 Ribosomal protein L10 AKN87_09965 PF16320 Ribosomal protein L7/L12 dimerisation domain AKN87_09965 PF00542 Ribosomal protein L7/L12 C-terminal domain AKN87_09970 PF00562 RNA polymerase Rpb2, domain 6 AKN87_09970 PF10385 RNA polymerase beta subunit external 1 domain AKN87_09970 PF04565 RNA polymerase Rpb2, domain 3 AKN87_09970 PF04561 RNA polymerase Rpb2, domain 2 AKN87_09970 PF04563 RNA polymerase beta subunit AKN87_09970 PF04560 RNA polymerase Rpb2, domain 7 AKN87_09975 PF00623 RNA polymerase Rpb1, domain 2 AKN87_09975 PF04983 RNA polymerase Rpb1, domain 3 AKN87_09975 PF04997 RNA polymerase Rpb1, domain 1 AKN87_09975 PF04998 RNA polymerase Rpb1, domain 5 AKN87_09975 PF05000 RNA polymerase Rpb1, domain 4 AKN87_09980 PF00164 Ribosomal protein S12/S23 AKN87_09985 PF00177 Ribosomal protein S7p/S5e AKN87_09990 PF00679 Elongation factor G C-terminus AKN87_09990 PF14492 Elongation Factor G, domain II AKN87_09990 PF03764 Elongation factor G, domain IV AKN87_09990 PF00009 Elongation factor Tu GTP binding domain AKN87_09990 PF03144 Elongation factor Tu domain 2 AKN87_09995 PF03143 Elongation factor Tu C-terminal domain AKN87_09995 PF03144 Elongation factor Tu domain 2 AKN87_09995 PF00009 Elongation factor Tu GTP binding domain AKN87_10000 PF00338 Ribosomal protein S10p/S20e AKN87_10005 PF00297 Ribosomal protein L3 AKN87_10010 PF00573 Ribosomal protein L4/L1 family AKN87_10015 PF00276 Ribosomal protein L23 AKN87_10020 PF00181 Ribosomal Proteins L2, RNA binding domain AKN87_10020 PF03947 Ribosomal Proteins L2, C-terminal domain AKN87_10025 PF00203 Ribosomal protein S19 AKN87_10030 PF00237 Ribosomal protein L22p/L17e AKN87_10035 PF00189 Ribosomal protein S3, C-terminal domain AKN87_10035 PF07650 KH domain AKN87_10040 PF00252 Ribosomal protein L16p/L10e AKN87_10045 PF00831 Ribosomal L29 protein AKN87_10050 PF00366 Ribosomal protein S17 AKN87_10055 PF00238 Ribosomal protein L14p/L23e AKN87_10060 PF00467 KOW motif AKN87_10060 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AKN87_10065 PF00281 Ribosomal protein L5 AKN87_10065 PF00673 ribosomal L5P family C-terminus AKN87_10070 PF00253 Ribosomal protein S14p/S29e AKN87_10075 PF00410 Ribosomal protein S8 AKN87_10080 PF00347 Ribosomal protein L6 AKN87_10085 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AKN87_10090 PF00333 Ribosomal protein S5, N-terminal domain AKN87_10090 PF03719 Ribosomal protein S5, C-terminal domain AKN87_10095 PF00327 Ribosomal protein L30p/L7e AKN87_10100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AKN87_10105 PF00344 SecY translocase AKN87_10110 PF00416 Ribosomal protein S13/S18 AKN87_10115 PF00411 Ribosomal protein S11 AKN87_10120 PF01479 S4 domain AKN87_10120 PF00163 Ribosomal protein S4/S9 N-terminal domain AKN87_10125 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AKN87_10125 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AKN87_10125 PF01000 RNA polymerase Rpb3/RpoA insert domain AKN87_10130 PF01196 Ribosomal protein L17 AKN87_10150 PF00437 Type II/IV secretion system protein AKN87_10150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AKN87_10155 PF00482 Type II secretion system (T2SS), protein F AKN87_10160 PF06750 Bacterial Peptidase A24 N-terminal domain AKN87_10160 PF01478 Type IV leader peptidase family AKN87_10180 PF03471 Transporter associated domain AKN87_10180 PF02080 TrkA-C domain AKN87_10180 PF00999 Sodium/hydrogen exchanger family AKN87_10185 PF00924 Mechanosensitive ion channel AKN87_10185 PF12795 Mechanosensitive ion channel porin domain AKN87_10185 PF12794 Mechanosensitive ion channel inner membrane domain 1 AKN87_10190 PF01263 Aldose 1-epimerase AKN87_10195 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AKN87_10215 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AKN87_10220 PF14480 DNA polymerase III polC-type N-terminus I AKN87_10220 PF11490 DNA polymerase III polC-type N-terminus II AKN87_10220 PF07733 Bacterial DNA polymerase III alpha NTPase domain AKN87_10220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AKN87_10220 PF02811 PHP domain AKN87_10220 PF00929 Exonuclease AKN87_10220 PF14579 Helix-hairpin-helix motif AKN87_10230 PF01274 Malate synthase AKN87_10245 PF07396 Phosphate-selective porin O and P AKN87_10255 PF00892 EamA-like transporter family AKN87_10260 PF12833 Helix-turn-helix domain AKN87_10260 PF02311 AraC-like ligand binding domain AKN87_10265 PF00490 Delta-aminolevulinic acid dehydratase AKN87_10270 PF02592 Putative vitamin uptake transporter AKN87_10275 PF10415 Fumarase C C-terminus AKN87_10275 PF00206 Lyase AKN87_10285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKN87_10285 PF02770 Acyl-CoA dehydrogenase, middle domain AKN87_10285 PF12806 Acetyl-CoA dehydrogenase C-terminal like AKN87_10285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKN87_10295 PF13193 AMP-binding enzyme C-terminal domain AKN87_10295 PF00501 AMP-binding enzyme AKN87_10300 PF13493 Domain of unknown function (DUF4118) AKN87_10300 PF13426 PAS domain AKN87_10300 PF08447 PAS fold AKN87_10300 PF00989 PAS fold AKN87_10300 PF00512 His Kinase A (phospho-acceptor) domain AKN87_10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_10305 PF00072 Response regulator receiver domain AKN87_10305 PF00196 Bacterial regulatory proteins, luxR family AKN87_10310 PF01966 HD domain AKN87_10310 PF12627 Probable RNA and SrmB- binding site of polymerase A AKN87_10310 PF01743 Poly A polymerase head domain AKN87_10315 PF00578 AhpC/TSA family AKN87_10315 PF10417 C-terminal domain of 1-Cys peroxiredoxin AKN87_10320 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN87_10320 PF13192 Thioredoxin domain AKN87_10335 PF04546 Sigma-70, non-essential region AKN87_10335 PF00140 Sigma-70 factor, region 1.2 AKN87_10335 PF04542 Sigma-70 region 2 AKN87_10335 PF04539 Sigma-70 region 3 AKN87_10335 PF04545 Sigma-70, region 4 AKN87_10335 PF03979 Sigma-70 factor, region 1.1 AKN87_10340 PF10410 DnaB-helicase binding domain of primase AKN87_10340 PF01807 CHC2 zinc finger AKN87_10340 PF08275 DNA primase catalytic core, N-terminal domain AKN87_10340 PF13662 Toprim domain AKN87_10340 PF08278 DNA primase DnaG DnaB-binding AKN87_10345 PF01165 Ribosomal protein S21 AKN87_10350 PF00814 Glycoprotease family AKN87_10355 PF02660 Glycerol-3-phosphate acyltransferase AKN87_10360 PF02152 Dihydroneopterin aldolase AKN87_10365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AKN87_10370 PF03788 LrgA family AKN87_10375 PF04172 LrgB-like family AKN87_10380 PF00294 pfkB family carbohydrate kinase AKN87_10380 PF01467 Cytidylyltransferase-like AKN87_10385 PF00248 Aldo/keto reductase family AKN87_10390 PF01266 FAD dependent oxidoreductase AKN87_10395 PF00375 Sodium:dicarboxylate symporter family AKN87_10405 PF02508 Rnf-Nqr subunit, membrane protein AKN87_10410 PF04205 FMN-binding domain AKN87_10415 PF03116 NQR2, RnfD, RnfE family AKN87_10420 PF12838 4Fe-4S dicluster domain AKN87_10420 PF10531 SLBB domain AKN87_10420 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AKN87_10420 PF13375 RnfC Barrel sandwich hybrid domain AKN87_10425 PF04060 Putative Fe-S cluster AKN87_10430 PF02508 Rnf-Nqr subunit, membrane protein AKN87_10440 PF00474 Sodium:solute symporter family AKN87_10450 PF00677 Lumazine binding domain AKN87_10455 PF00925 GTP cyclohydrolase II AKN87_10455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AKN87_10460 PF00885 6,7-dimethyl-8-ribityllumazine synthase AKN87_10465 PF01029 NusB family AKN87_10470 PF02769 AIR synthase related protein, C-terminal domain AKN87_10470 PF00586 AIR synthase related protein, N-terminal domain AKN87_10475 PF04608 Phosphatidylglycerophosphatase A AKN87_10480 PF01435 Peptidase family M48 AKN87_10485 PF01227 GTP cyclohydrolase I AKN87_10490 PF00270 DEAD/DEAH box helicase AKN87_10490 PF04408 Helicase associated domain (HA2) AKN87_10490 PF00271 Helicase conserved C-terminal domain AKN87_10490 PF08482 ATP-dependent helicase C-terminal AKN87_10500 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AKN87_10510 PF03480 Bacterial extracellular solute-binding protein, family 7 AKN87_10515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AKN87_10515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AKN87_10520 PF00392 Bacterial regulatory proteins, gntR family AKN87_10520 PF07729 FCD domain AKN87_10530 PF00285 Citrate synthase, C-terminal domain AKN87_10535 PF00694 Aconitase C-terminal domain AKN87_10535 PF00330 Aconitase family (aconitate hydratase) AKN87_10540 PF04303 PrpF protein AKN87_10555 PF13533 Biotin-lipoyl like AKN87_10565 PF00501 AMP-binding enzyme AKN87_10565 PF13193 AMP-binding enzyme C-terminal domain AKN87_10570 PF00108 Thiolase, N-terminal domain AKN87_10570 PF02803 Thiolase, C-terminal domain AKN87_10575 PF12833 Helix-turn-helix domain AKN87_10575 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AKN87_10590 PF00072 Response regulator receiver domain AKN87_10590 PF00196 Bacterial regulatory proteins, luxR family AKN87_10595 PF01219 Prokaryotic diacylglycerol kinase AKN87_10600 PF01053 Cys/Met metabolism PLP-dependent enzyme AKN87_10610 PF01139 tRNA-splicing ligase RtcB AKN87_10615 PF00682 HMGL-like AKN87_10615 PF08502 LeuA allosteric (dimerisation) domain AKN87_10630 PF00484 Carbonic anhydrase AKN87_10640 PF02817 e3 binding domain AKN87_10640 PF00364 Biotin-requiring enzyme AKN87_10640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AKN87_10645 PF02779 Transketolase, pyrimidine binding domain AKN87_10645 PF02780 Transketolase, C-terminal domain AKN87_10650 PF00676 Dehydrogenase E1 component AKN87_10650 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal AKN87_10660 PF02272 DHHA1 domain AKN87_10660 PF17768 RecJ OB domain AKN87_10660 PF01368 DHH family AKN87_10670 PF13847 Methyltransferase domain AKN87_10675 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AKN87_10675 PF00476 DNA polymerase family A AKN87_10675 PF01612 3'-5' exonuclease AKN87_10675 PF01367 5'-3' exonuclease, C-terminal SAM fold AKN87_10685 PF01569 PAP2 superfamily AKN87_10690 PF01430 Hsp33 protein AKN87_10695 PF01293 Phosphoenolpyruvate carboxykinase AKN87_10700 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AKN87_10700 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AKN87_10705 PF01380 SIS domain AKN87_10705 PF01418 Helix-turn-helix domain, rpiR family AKN87_10710 PF03061 Thioesterase superfamily AKN87_10720 PF03741 Integral membrane protein TerC family AKN87_10730 PF12848 ABC transporter AKN87_10730 PF00005 ABC transporter AKN87_10735 PF02600 Disulfide bond formation protein DsbB AKN87_10750 PF02602 Uroporphyrinogen-III synthase HemD AKN87_10755 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AKN87_10755 PF03900 Porphobilinogen deaminase, C-terminal domain AKN87_10760 PF04397 LytTr DNA-binding domain AKN87_10760 PF00072 Response regulator receiver domain AKN87_10770 PF00512 His Kinase A (phospho-acceptor) domain AKN87_10770 PF01627 Hpt domain AKN87_10770 PF00072 Response regulator receiver domain AKN87_10770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AKN87_10770 PF00672 HAMP domain AKN87_10770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_10775 PF00291 Pyridoxal-phosphate dependent enzyme AKN87_10780 PF05958 tRNA (Uracil-5-)-methyltransferase AKN87_10780 PF01938 TRAM domain AKN87_10785 PF13291 ACT domain AKN87_10785 PF02824 TGS domain AKN87_10785 PF04607 Region found in RelA / SpoT proteins AKN87_10790 PF03819 MazG nucleotide pyrophosphohydrolase domain AKN87_10795 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AKN87_10800 PF00034 Cytochrome c AKN87_10805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN87_10810 PF01649 Ribosomal protein S20 AKN87_10815 PF03023 Lipid II flippase MurJ AKN87_10820 PF06574 FAD synthetase AKN87_10820 PF01687 Riboflavin kinase AKN87_10825 PF06827 Zinc finger found in FPG and IleRS AKN87_10825 PF08264 Anticodon-binding domain of tRNA AKN87_10825 PF00133 tRNA synthetases class I (I, L, M and V) AKN87_10830 PF01252 Signal peptidase (SPase) II AKN87_10835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKN87_10840 PF02401 LytB protein AKN87_10845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AKN87_10845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AKN87_10855 PF01784 NIF3 (NGG1p interacting factor 3) AKN87_10860 PF07396 Phosphate-selective porin O and P AKN87_10865 PF14489 QueF-like protein AKN87_10865 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AKN87_10870 PF03167 Uracil DNA glycosylase superfamily AKN87_10895 PF03974 Ecotin AKN87_10900 PF01066 CDP-alcohol phosphatidyltransferase AKN87_10905 PF08459 UvrC Helix-hairpin-helix N-terminal AKN87_10905 PF01541 GIY-YIG catalytic domain AKN87_10905 PF02151 UvrB/uvrC motif AKN87_10910 PF00072 Response regulator receiver domain AKN87_10910 PF00196 Bacterial regulatory proteins, luxR family AKN87_10915 PF01612 3'-5' exonuclease AKN87_10915 PF00570 HRDC domain AKN87_10920 PF05166 YcgL domain AKN87_10930 PF07282 Putative transposase DNA-binding domain AKN87_10930 PF12323 Helix-turn-helix domain AKN87_10930 PF01385 Probable transposase AKN87_10940 PF05724 Thiopurine S-methyltransferase (TPMT) AKN87_10945 PF12169 DNA polymerase III subunits gamma and tau domain III AKN87_10945 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AKN87_10945 PF12170 DNA polymerase III tau subunit V interacting with alpha AKN87_10950 PF02575 YbaB/EbfC DNA-binding family AKN87_10955 PF02132 RecR protein AKN87_10955 PF13662 Toprim domain AKN87_10965 PF00873 AcrB/AcrD/AcrF family AKN87_10990 PF01882 Protein of unknown function DUF58 AKN87_10995 PF17863 AAA lid domain AKN87_10995 PF07726 ATPase family associated with various cellular activities (AAA) AKN87_11000 PF00849 RNA pseudouridylate synthase AKN87_11005 PF03776 Septum formation topological specificity factor MinE AKN87_11010 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AKN87_11015 PF03775 Septum formation inhibitor MinC, C-terminal domain AKN87_11015 PF05209 Septum formation inhibitor MinC, N-terminal domain AKN87_11020 PF03279 Bacterial lipid A biosynthesis acyltransferase AKN87_11030 PF04333 MlaA lipoprotein AKN87_11040 PF09334 tRNA synthetases class I (M) AKN87_11040 PF01588 Putative tRNA binding domain AKN87_11045 PF10609 NUBPL iron-transfer P-loop NTPase AKN87_11050 PF00313 'Cold-shock' DNA-binding domain AKN87_11055 PF00692 dUTPase AKN87_11065 PF08463 EcoEI R protein C-terminal AKN87_11065 PF00271 Helicase conserved C-terminal domain AKN87_11065 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AKN87_11065 PF04851 Type III restriction enzyme, res subunit AKN87_11070 PF12161 HsdM N-terminal domain AKN87_11070 PF02384 N-6 DNA Methylase AKN87_11075 PF01420 Type I restriction modification DNA specificity domain AKN87_11105 PF00916 Sulfate permease family AKN87_11105 PF01740 STAS domain AKN87_11110 PF01022 Bacterial regulatory protein, arsR family AKN87_11115 PF03358 NADPH-dependent FMN reductase AKN87_11120 PF01758 Sodium Bile acid symporter family AKN87_11125 PF03960 ArsC family AKN87_11135 PF04542 Sigma-70 region 2 AKN87_11135 PF08281 Sigma-70, region 4 AKN87_11150 PF02796 Helix-turn-helix domain of resolvase AKN87_11150 PF00239 Resolvase, N terminal domain AKN87_11160 PF01965 DJ-1/PfpI family AKN87_11165 PF12706 Beta-lactamase superfamily domain AKN87_11170 PF01638 HxlR-like helix-turn-helix AKN87_11175 PF01527 Transposase AKN87_11180 PF13276 HTH-like domain AKN87_11180 PF00665 Integrase core domain AKN87_11180 PF13333 Integrase core domain AKN87_11210 PF00589 Phage integrase family AKN87_11210 PF14659 Phage integrase, N-terminal SAM-like domain AKN87_11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN87_11245 PF03466 LysR substrate binding domain AKN87_11255 PF00311 Phosphoenolpyruvate carboxylase AKN87_11275 PF02311 AraC-like ligand binding domain AKN87_11275 PF12833 Helix-turn-helix domain AKN87_11280 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AKN87_11280 PF14850 DNA-binding domain of Proline dehydrogenase AKN87_11280 PF01619 Proline dehydrogenase AKN87_11280 PF00171 Aldehyde dehydrogenase family AKN87_11285 PF00474 Sodium:solute symporter family AKN87_11295 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AKN87_11300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AKN87_11305 PF13439 Glycosyltransferase Family 4 AKN87_11305 PF00534 Glycosyl transferases group 1 AKN87_11330 PF16861 Carbamoyltransferase C-terminus AKN87_11330 PF02543 Carbamoyltransferase N-terminus AKN87_11335 PF00534 Glycosyl transferases group 1 AKN87_11335 PF13439 Glycosyltransferase Family 4 AKN87_11365 PF10996 Beta-Casp domain AKN87_11365 PF00753 Metallo-beta-lactamase superfamily AKN87_11365 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AKN87_11380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AKN87_11380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AKN87_11380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AKN87_11385 PF01370 NAD dependent epimerase/dehydratase family AKN87_11405 PF13439 Glycosyltransferase Family 4 AKN87_11405 PF00534 Glycosyl transferases group 1 AKN87_11410 PF13439 Glycosyltransferase Family 4 AKN87_11410 PF00534 Glycosyl transferases group 1 AKN87_11415 PF13477 Glycosyl transferase 4-like AKN87_11415 PF00534 Glycosyl transferases group 1 AKN87_11425 PF01370 NAD dependent epimerase/dehydratase family AKN87_11430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AKN87_11430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AKN87_11430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AKN87_11435 PF02397 Bacterial sugar transferase AKN87_11440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AKN87_11445 PF02719 Polysaccharide biosynthesis protein AKN87_11465 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN87_11480 PF03330 Lytic transglycolase AKN87_11485 PF02934 GatB/GatE catalytic domain AKN87_11485 PF02637 GatB domain AKN87_11490 PF01425 Amidase AKN87_11495 PF02686 Glu-tRNAGln amidotransferase C subunit AKN87_11505 PF04085 rod shape-determining protein MreC AKN87_11515 PF02545 Maf-like protein AKN87_11520 PF00575 S1 RNA binding domain AKN87_11520 PF10150 Ribonuclease E/G family AKN87_11530 PF02463 RecF/RecN/SMC N terminal domain AKN87_11535 PF01025 GrpE AKN87_11540 PF00012 Hsp70 protein AKN87_11545 PF00226 DnaJ domain AKN87_11545 PF01556 DnaJ C terminal domain AKN87_11545 PF00684 DnaJ central domain AKN87_11550 PF01113 Dihydrodipicolinate reductase, N-terminus AKN87_11550 PF05173 Dihydrodipicolinate reductase, C-terminus AKN87_11555 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AKN87_11555 PF00117 Glutamine amidotransferase class-I AKN87_11560 PF01810 LysE type translocator AKN87_11565 PF02142 MGS-like domain AKN87_11565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKN87_11565 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AKN87_11570 PF03449 Transcription elongation factor, N-terminal AKN87_11570 PF01272 Transcription elongation factor, GreA/GreB, C-term AKN87_11580 PF01985 CRS1 / YhbY (CRM) domain AKN87_11585 PF01728 FtsJ-like methyltransferase AKN87_11590 PF00004 ATPase family associated with various cellular activities (AAA) AKN87_11590 PF17862 AAA+ lid domain AKN87_11590 PF06480 FtsH Extracellular AKN87_11590 PF01434 Peptidase family M41 AKN87_11595 PF00809 Pterin binding enzyme AKN87_11600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AKN87_11600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AKN87_11600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AKN87_11600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AKN87_11605 PF00121 Triosephosphate isomerase AKN87_11610 PF03840 Preprotein translocase SecG subunit AKN87_11620 PF02576 RimP N-terminal domain AKN87_11620 PF17384 RimP C-terminal SH3 domain AKN87_11625 PF13184 NusA-like KH domain AKN87_11625 PF00575 S1 RNA binding domain AKN87_11625 PF08529 NusA N-terminal domain AKN87_11630 PF00009 Elongation factor Tu GTP binding domain AKN87_11630 PF04760 Translation initiation factor IF-2, N-terminal region AKN87_11630 PF11987 Translation-initiation factor 2 AKN87_11630 PF08364 Bacterial translation initiation factor IF-2 associated region AKN87_11635 PF02033 Ribosome-binding factor A AKN87_11640 PF09157 Pseudouridine synthase II TruB, C-terminal AKN87_11640 PF16198 tRNA pseudouridylate synthase B C-terminal domain AKN87_11640 PF01509 TruB family pseudouridylate synthase (N terminal domain) AKN87_11645 PF00312 Ribosomal protein S15 AKN87_11650 PF00575 S1 RNA binding domain AKN87_11650 PF00013 KH domain AKN87_11650 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AKN87_11650 PF01138 3' exoribonuclease family, domain 1 AKN87_11650 PF03725 3' exoribonuclease family, domain 2 AKN87_11660 PF01435 Peptidase family M48 AKN87_11665 PF10263 SprT-like family AKN87_11670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN87_11675 PF00072 Response regulator receiver domain AKN87_11675 PF00486 Transcriptional regulatory protein, C terminal AKN87_11680 PF00155 Aminotransferase class I and II AKN87_11685 PF00795 Carbon-nitrogen hydrolase AKN87_11690 PF00588 SpoU rRNA Methylase family AKN87_11700 PF02082 Transcriptional regulator AKN87_11705 PF00266 Aminotransferase class-V AKN87_11710 PF01592 NifU-like N terminal domain AKN87_11715 PF01521 Iron-sulphur cluster biosynthesis AKN87_11720 PF00226 DnaJ domain AKN87_11720 PF07743 HSCB C-terminal oligomerisation domain AKN87_11725 PF00012 Hsp70 protein AKN87_11730 PF00111 2Fe-2S iron-sulfur cluster binding domain AKN87_11735 PF04384 Iron-sulphur cluster assembly AKN87_11740 PF00334 Nucleoside diphosphate kinase AKN87_11745 PF04055 Radical SAM superfamily AKN87_11755 PF13464 Domain of unknown function (DUF4115) AKN87_11760 PF04551 GcpE protein AKN87_11765 PF03129 Anticodon binding domain AKN87_11765 PF13393 Histidyl-tRNA synthetase AKN87_11775 PF13360 PQQ-like domain AKN87_11780 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AKN87_11780 PF01926 50S ribosome-binding GTPase AKN87_11790 PF01126 Heme oxygenase AKN87_11815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AKN87_11815 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN87_11820 PF00575 S1 RNA binding domain AKN87_11820 PF10150 Ribonuclease E/G family AKN87_11820 PF12111 Polyribonucleotide phosphorylase C terminal AKN87_11825 PF00849 RNA pseudouridylate synthase AKN87_11825 PF01479 S4 domain AKN87_11830 PF13419 Haloacid dehalogenase-like hydrolase AKN87_11835 PF06965 Na+/H+ antiporter 1 AKN87_11835 PF01343 Peptidase family S49 AKN87_11840 PF02545 Maf-like protein AKN87_11845 PF02881 SRP54-type protein, helical bundle domain AKN87_11845 PF02978 Signal peptide binding domain AKN87_11845 PF00448 SRP54-type protein, GTPase domain AKN87_11850 PF00886 Ribosomal protein S16 AKN87_11855 PF05239 PRC-barrel domain AKN87_11855 PF01782 RimM N-terminal domain AKN87_11860 PF01746 tRNA (Guanine-1)-methyltransferase AKN87_11865 PF01245 Ribosomal protein L19 AKN87_11870 PF03591 AzlC protein AKN87_11880 PF04972 BON domain AKN87_11885 PF13580 SIS domain AKN87_11890 PF02021 Uncharacterised protein family UPF0102 AKN87_11895 PF04348 LppC putative lipoprotein AKN87_11900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AKN87_11905 PF05958 tRNA (Uracil-5-)-methyltransferase AKN87_11920 PF06146 Phosphate-starvation-inducible E AKN87_11930 PF00795 Carbon-nitrogen hydrolase AKN87_11935 PF01523 Putative modulator of DNA gyrase AKN87_11940 PF04751 Protein of unknown function (DUF615) AKN87_11945 PF01523 Putative modulator of DNA gyrase AKN87_11950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AKN87_11950 PF00205 Thiamine pyrophosphate enzyme, central domain AKN87_11950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AKN87_11955 PF10369 Small subunit of acetolactate synthase AKN87_11960 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AKN87_11960 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AKN87_11965 PF01066 CDP-alcohol phosphatidyltransferase AKN87_11995 PF08003 Protein of unknown function (DUF1698) AKN87_12000 PF13649 Methyltransferase domain AKN87_12010 PF01416 tRNA pseudouridine synthase AKN87_12015 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AKN87_12020 PF01039 Carboxyl transferase domain AKN87_12020 PF17848 Acetyl-coA carboxylase zinc finger domain AKN87_12025 PF02875 Mur ligase family, glutamate ligase domain AKN87_12025 PF08245 Mur ligase middle domain