locus-tag class description AKN93_00015 PF00664 ABC transporter transmembrane region AKN93_00015 PF00005 ABC transporter AKN93_00020 PF01590 GAF domain AKN93_00020 PF02954 Bacterial regulatory protein, Fis family AKN93_00020 PF00158 Sigma-54 interaction domain AKN93_00055 PF13409 Glutathione S-transferase, N-terminal domain AKN93_00065 PF01037 Lrp/AsnC ligand binding domain AKN93_00075 PF02562 PhoH-like protein AKN93_00075 PF13638 PIN domain AKN93_00080 PF01654 Cytochrome bd terminal oxidase subunit I AKN93_00085 PF02322 Cytochrome bd terminal oxidase subunit II AKN93_00090 PF03466 LysR substrate binding domain AKN93_00090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_00095 PF04341 Protein of unknown function, DUF485 AKN93_00100 PF00474 Sodium:solute symporter family AKN93_00105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AKN93_00105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AKN93_00105 PF11890 Domain of unknown function (DUF3410) AKN93_00110 PF02601 Exonuclease VII, large subunit AKN93_00110 PF13742 OB-fold nucleic acid binding domain AKN93_00115 PF01551 Peptidase family M23 AKN93_00120 PF00924 Mechanosensitive ion channel AKN93_00135 PF08502 LeuA allosteric (dimerisation) domain AKN93_00135 PF00682 HMGL-like AKN93_00140 PF04102 SlyX AKN93_00150 PF03573 outer membrane porin, OprD family AKN93_00155 PF03129 Anticodon binding domain AKN93_00155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AKN93_00155 PF04073 Aminoacyl-tRNA editing domain AKN93_00160 PF03616 Sodium/glutamate symporter AKN93_00170 PF00378 Enoyl-CoA hydratase/isomerase AKN93_00175 PF02803 Thiolase, C-terminal domain AKN93_00175 PF00108 Thiolase, N-terminal domain AKN93_00180 PF00106 short chain dehydrogenase AKN93_00185 PF00501 AMP-binding enzyme AKN93_00185 PF13193 AMP-binding enzyme C-terminal domain AKN93_00195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_00195 PF03466 LysR substrate binding domain AKN93_00200 PF00171 Aldehyde dehydrogenase family AKN93_00205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AKN93_00205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AKN93_00210 PF00378 Enoyl-CoA hydratase/isomerase AKN93_00215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKN93_00215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKN93_00215 PF02770 Acyl-CoA dehydrogenase, middle domain AKN93_00220 PF00118 TCP-1/cpn60 chaperonin family AKN93_00225 PF00166 Chaperonin 10 Kd subunit AKN93_00230 PF04186 FxsA cytoplasmic membrane protein AKN93_00235 PF07690 Major Facilitator Superfamily AKN93_00250 PF01012 Electron transfer flavoprotein domain AKN93_00250 PF00766 Electron transfer flavoprotein FAD-binding domain AKN93_00255 PF01012 Electron transfer flavoprotein domain AKN93_00265 PF03358 NADPH-dependent FMN reductase AKN93_00270 PF00117 Glutamine amidotransferase class-I AKN93_00270 PF02540 NAD synthase AKN93_00270 PF00958 GMP synthase C terminal domain AKN93_00275 PF00478 IMP dehydrogenase / GMP reductase domain AKN93_00275 PF00571 CBS domain AKN93_00280 PF04386 Stringent starvation protein B AKN93_00285 PF02798 Glutathione S-transferase, N-terminal domain AKN93_00285 PF00043 Glutathione S-transferase, C-terminal domain AKN93_00290 PF02167 Cytochrome C1 family AKN93_00295 PF00033 Cytochrome b/b6/petB AKN93_00295 PF00032 Cytochrome b(C-terminal)/b6/petD AKN93_00300 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AKN93_00300 PF00355 Rieske [2Fe-2S] domain AKN93_00305 PF00380 Ribosomal protein S9/S16 AKN93_00310 PF00572 Ribosomal protein L13 AKN93_00315 PF01740 STAS domain AKN93_00315 PF00916 Sulfate permease family AKN93_00320 PF00156 Phosphoribosyl transferase domain AKN93_00330 PF00860 Permease family AKN93_00335 PF13667 ThiC-associated domain AKN93_00335 PF01964 Radical SAM ThiC family AKN93_00340 PF02321 Outer membrane efflux protein AKN93_00345 PF02562 PhoH-like protein AKN93_00350 PF02130 Uncharacterized protein family UPF0054 AKN93_00355 PF03471 Transporter associated domain AKN93_00355 PF00571 CBS domain AKN93_00360 PF00795 Carbon-nitrogen hydrolase AKN93_00380 PF13419 Haloacid dehalogenase-like hydrolase AKN93_00385 PF00589 Phage integrase family AKN93_00385 PF02899 Phage integrase, N-terminal SAM-like domain AKN93_00400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AKN93_00400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AKN93_00410 PF01491 Frataxin-like domain AKN93_00415 PF01272 Transcription elongation factor, GreA/GreB, C-term AKN93_00415 PF14760 Rnk N-terminus AKN93_00420 PF00085 Thioredoxin AKN93_00425 PF00114 Pilin (bacterial filament) AKN93_00425 PF07963 Prokaryotic N-terminal methylation motif AKN93_00430 PF12626 Polymerase A arginine-rich C-terminus AKN93_00430 PF12627 Probable RNA and SrmB- binding site of polymerase A AKN93_00430 PF01743 Poly A polymerase head domain AKN93_00435 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AKN93_00440 PF02548 Ketopantoate hydroxymethyltransferase AKN93_00445 PF02569 Pantoate-beta-alanine ligase AKN93_00450 PF02261 Aspartate decarboxylase AKN93_00455 PF00342 Phosphoglucose isomerase AKN93_00460 PF02803 Thiolase, C-terminal domain AKN93_00460 PF00108 Thiolase, N-terminal domain AKN93_00465 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ AKN93_00475 PF02127 Aminopeptidase I zinc metalloprotease (M18) AKN93_00480 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AKN93_00485 PF17746 SfsA N-terminal OB domain AKN93_00485 PF03749 Sugar fermentation stimulation protein RE domain AKN93_00490 PF00155 Aminotransferase class I and II AKN93_00500 PF00925 GTP cyclohydrolase II AKN93_00505 PF18073 Rubredoxin metal binding domain AKN93_00515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKN93_00515 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AKN93_00525 PF01220 Dehydroquinase class II AKN93_00530 PF00364 Biotin-requiring enzyme AKN93_00535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKN93_00535 PF00289 Biotin carboxylase, N-terminal domain AKN93_00535 PF02785 Biotin carboxylase C-terminal domain AKN93_00540 PF08676 MutL C terminal dimerisation domain AKN93_00540 PF01119 DNA mismatch repair protein, C-terminal domain AKN93_00545 PF01520 N-acetylmuramoyl-L-alanine amidase AKN93_00545 PF11741 AMIN domain AKN93_00550 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AKN93_00555 PF08331 Domain of unknown function (DUF1730) AKN93_00560 PF00929 Exonuclease AKN93_00565 PF03193 RsgA GTPase AKN93_00570 PF02666 Phosphatidylserine decarboxylase AKN93_00575 PF00665 Integrase core domain AKN93_00580 PF01527 Transposase AKN93_00590 PF00227 Proteasome subunit AKN93_00595 PF07724 AAA domain (Cdc48 subfamily) AKN93_00595 PF00004 ATPase family associated with various cellular activities (AAA) AKN93_00605 PF01209 ubiE/COQ5 methyltransferase family AKN93_00615 PF03109 ABC1 family AKN93_00620 PF01502 Phosphoribosyl-AMP cyclohydrolase AKN93_00625 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AKN93_00630 PF02416 mttA/Hcf106 family AKN93_00635 PF02416 mttA/Hcf106 family AKN93_00650 PF13411 MerR HTH family regulatory protein AKN93_00655 PF00403 Heavy-metal-associated domain AKN93_00660 PF05362 Lon protease (S16) C-terminal proteolytic domain AKN93_00660 PF13654 AAA domain AKN93_00675 PF00005 ABC transporter AKN93_00685 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AKN93_00685 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AKN93_00690 PF00881 Nitroreductase family AKN93_00695 PF00762 Ferrochelatase AKN93_00700 PF01554 MatE AKN93_00705 PF00085 Thioredoxin AKN93_00710 PF08468 Methyltransferase small domain N-terminal AKN93_00710 PF05175 Methyltransferase small domain AKN93_00715 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AKN93_00715 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AKN93_00720 PF06945 Protein of unknown function (DUF1289) AKN93_00725 PF03477 ATP cone domain AKN93_00725 PF02867 Ribonucleotide reductase, barrel domain AKN93_00725 PF00317 Ribonucleotide reductase, all-alpha domain AKN93_00730 PF00268 Ribonucleotide reductase, small chain AKN93_00735 PF00111 2Fe-2S iron-sulfur cluster binding domain AKN93_00745 PF00588 SpoU rRNA Methylase family AKN93_00750 PF14765 Polyketide synthase dehydratase AKN93_00750 PF00550 Phosphopantetheine attachment site AKN93_00750 PF08659 KR domain AKN93_00750 PF08240 Alcohol dehydrogenase GroES-like domain AKN93_00750 PF00698 Acyl transferase domain AKN93_00755 PF00595 PDZ domain AKN93_00755 PF11818 C-terminal domain of tail specific protease (DUF3340) AKN93_00755 PF17804 Tail specific protease N-terminal domain AKN93_00755 PF03572 Peptidase family S41 AKN93_00775 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AKN93_00775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKN93_00795 PF04381 Putative exonuclease, RdgC AKN93_00800 PF00709 Adenylosuccinate synthetase AKN93_00805 PF13393 Histidyl-tRNA synthetase AKN93_00810 PF01145 SPFH domain / Band 7 family AKN93_00815 PF01145 SPFH domain / Band 7 family AKN93_00820 PF16360 GTP-binding GTPase Middle Region AKN93_00820 PF13167 GTP-binding GTPase N-terminal AKN93_00820 PF01926 50S ribosome-binding GTPase AKN93_00825 PF17209 Hfq protein AKN93_00840 PF06039 Malate:quinone oxidoreductase (Mqo) AKN93_00850 PF02540 NAD synthase AKN93_00850 PF00795 Carbon-nitrogen hydrolase AKN93_00855 PF02146 Sir2 family AKN93_00860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN93_00870 PF03222 Tryptophan/tyrosine permease family AKN93_00875 PF00152 tRNA synthetases class II (D, K and N) AKN93_00875 PF01336 OB-fold nucleic acid binding domain AKN93_00880 PF03462 PCRF domain AKN93_00880 PF00472 RF-1 domain AKN93_00885 PF07963 Prokaryotic N-terminal methylation motif AKN93_00885 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AKN93_00910 PF01472 PUA domain AKN93_00910 PF00696 Amino acid kinase family AKN93_00915 PF01926 50S ribosome-binding GTPase AKN93_00915 PF01018 GTP1/OBG AKN93_00920 PF01016 Ribosomal L27 protein AKN93_00925 PF00829 Ribosomal prokaryotic L21 protein AKN93_00930 PF00348 Polyprenyl synthetase AKN93_00935 PF01741 Large-conductance mechanosensitive channel, MscL AKN93_00940 PF02445 Quinolinate synthetase A protein AKN93_00950 PF16331 TolA binding protein trimerisation AKN93_00950 PF13525 Outer membrane lipoprotein AKN93_00955 PF00691 OmpA family AKN93_00960 PF07676 WD40-like Beta Propeller Repeat AKN93_00960 PF04052 TolB amino-terminal domain AKN93_00970 PF02472 Biopolymer transport protein ExbD/TolR AKN93_00975 PF01618 MotA/TolQ/ExbB proton channel family AKN93_00980 PF03061 Thioesterase superfamily AKN93_00985 PF17864 RuvB AAA lid domain AKN93_00985 PF05491 RuvB C-terminal winged helix domain AKN93_00985 PF05496 Holliday junction DNA helicase RuvB P-loop domain AKN93_00990 PF01330 RuvA N terminal domain AKN93_00990 PF07499 RuvA, C-terminal domain AKN93_00995 PF02075 Crossover junction endodeoxyribonuclease RuvC AKN93_01000 PF01709 Transcriptional regulator AKN93_01005 PF01336 OB-fold nucleic acid binding domain AKN93_01005 PF00152 tRNA synthetases class II (D, K and N) AKN93_01005 PF02938 GAD domain AKN93_01010 PF00313 'Cold-shock' DNA-binding domain AKN93_01015 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AKN93_01015 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AKN93_01025 PF10458 Valyl tRNA synthetase tRNA binding arm AKN93_01025 PF00133 tRNA synthetases class I (I, L, M and V) AKN93_01025 PF08264 Anticodon-binding domain of tRNA AKN93_01035 PF02653 Branched-chain amino acid transport system / permease component AKN93_01040 PF00005 ABC transporter AKN93_01045 PF02080 TrkA-C domain AKN93_01045 PF03600 Citrate transporter AKN93_01050 PF05971 RNA methyltransferase AKN93_01055 PF03884 DNA gyrase inhibitor YacG AKN93_01060 PF01121 Dephospho-CoA kinase AKN93_01065 PF00218 Indole-3-glycerol phosphate synthase AKN93_01070 PF02885 Glycosyl transferase family, helical bundle domain AKN93_01070 PF00591 Glycosyl transferase family, a/b domain AKN93_01075 PF00117 Glutamine amidotransferase class-I AKN93_01080 PF01113 Dihydrodipicolinate reductase, N-terminus AKN93_01080 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain AKN93_01085 PF00425 chorismate binding enzyme AKN93_01085 PF04715 Anthranilate synthase component I, N terminal region AKN93_01090 PF13419 Haloacid dehalogenase-like hydrolase AKN93_01095 PF00834 Ribulose-phosphate 3 epimerase family AKN93_01110 PF02222 ATP-grasp domain AKN93_01110 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AKN93_01115 PF00731 AIR carboxylase AKN93_01120 PF02441 Flavoprotein AKN93_01125 PF08245 Mur ligase middle domain AKN93_01125 PF02875 Mur ligase family, glutamate ligase domain AKN93_01125 PF01225 Mur ligase family, catalytic domain AKN93_01130 PF00583 Acetyltransferase (GNAT) family AKN93_01135 PF00719 Inorganic pyrophosphatase AKN93_01140 PF02609 Exonuclease VII small subunit AKN93_01145 PF00348 Polyprenyl synthetase AKN93_01170 PF12843 Putative quorum-sensing-regulated virulence factor AKN93_01175 PF00271 Helicase conserved C-terminal domain AKN93_01175 PF00270 DEAD/DEAH box helicase AKN93_01175 PF03880 DbpA RNA binding domain AKN93_01180 PF04055 Radical SAM superfamily AKN93_01185 PF01132 Elongation factor P (EF-P) OB domain AKN93_01185 PF08207 Elongation factor P (EF-P) KOW-like domain AKN93_01185 PF09285 Elongation factor P, C-terminal AKN93_01190 PF00152 tRNA synthetases class II (D, K and N) AKN93_01205 PF00155 Aminotransferase class I and II AKN93_01215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AKN93_01215 PF02817 e3 binding domain AKN93_01215 PF00364 Biotin-requiring enzyme AKN93_01220 PF17831 Pyruvate dehydrogenase E1 component middle domain AKN93_01220 PF00456 Transketolase, thiamine diphosphate binding domain AKN93_01225 PF08335 GlnD PII-uridylyltransferase AKN93_01225 PF03710 Glutamate-ammonia ligase adenylyltransferase AKN93_01235 PF00226 DnaJ domain AKN93_01235 PF05099 Tellurite resistance protein TerB AKN93_01240 PF00483 Nucleotidyl transferase AKN93_01245 PF01636 Phosphotransferase enzyme family AKN93_01250 PF04453 LPS transport system D AKN93_01250 PF03968 OstA-like protein AKN93_01255 PF09312 SurA N-terminal domain AKN93_01255 PF00639 PPIC-type PPIASE domain AKN93_01260 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AKN93_01275 PF00005 ABC transporter AKN93_01280 PF13533 Biotin-lipoyl like AKN93_01285 PF01812 5-formyltetrahydrofolate cyclo-ligase family AKN93_01290 PF05164 Cell division protein ZapA AKN93_01300 PF03695 Uncharacterised protein family (UPF0149) AKN93_01305 PF00557 Metallopeptidase family M24 AKN93_01305 PF05195 Aminopeptidase P, N-terminal domain AKN93_01310 PF01494 FAD binding domain AKN93_01320 PF01494 FAD binding domain AKN93_01355 PF02470 MlaD protein AKN93_01360 PF00005 ABC transporter AKN93_01365 PF02405 Permease MlaE AKN93_01370 PF00521 DNA gyrase/topoisomerase IV, subunit A AKN93_01370 PF03989 DNA gyrase C-terminal domain, beta-propeller AKN93_01385 PF05728 Uncharacterised protein family (UPF0227) AKN93_01390 PF00149 Calcineurin-like phosphoesterase AKN93_01395 PF02578 Multi-copper polyphenol oxidoreductase laccase AKN93_01400 PF00849 RNA pseudouridylate synthase AKN93_01400 PF01479 S4 domain AKN93_01405 PF13525 Outer membrane lipoprotein AKN93_01410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKN93_01415 PF00871 Acetokinase family AKN93_01420 PF01515 Phosphate acetyl/butaryl transferase AKN93_01420 PF07085 DRTGG domain AKN93_01425 PF01553 Acyltransferase AKN93_01430 PF05683 Fumarase C-terminus AKN93_01430 PF05681 Fumarate hydratase (Fumerase) AKN93_01440 PF04287 tRNA pseudouridine synthase C AKN93_01460 PF00293 NUDIX domain AKN93_01470 PF03144 Elongation factor Tu domain 2 AKN93_01470 PF00009 Elongation factor Tu GTP binding domain AKN93_01470 PF00679 Elongation factor G C-terminus AKN93_01475 PF02926 THUMP domain AKN93_01475 PF02568 Thiamine biosynthesis protein (ThiI) AKN93_01480 PF03951 Glutamine synthetase, beta-Grasp domain AKN93_01480 PF00120 Glutamine synthetase, catalytic domain AKN93_01490 PF00732 GMC oxidoreductase AKN93_01490 PF05199 GMC oxidoreductase AKN93_01495 PF00171 Aldehyde dehydrogenase family AKN93_01500 PF02028 BCCT, betaine/carnitine/choline family transporter AKN93_01505 PF01895 PhoU domain AKN93_01510 PF00005 ABC transporter AKN93_01515 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_01520 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_01525 PF12849 PBP superfamily domain AKN93_01535 PF01761 3-dehydroquinate synthase AKN93_01540 PF01202 Shikimate kinase AKN93_01555 PF04350 Pilus assembly protein, PilO AKN93_01560 PF05137 Fimbrial assembly protein (PilN) AKN93_01565 PF11104 Type IV pilus assembly protein PilM; AKN93_01570 PF00905 Penicillin binding protein transpeptidase domain AKN93_01570 PF17092 Penicillin-binding protein OB-like domain AKN93_01570 PF00912 Transglycosylase AKN93_01575 PF00390 Malic enzyme, N-terminal domain AKN93_01575 PF03949 Malic enzyme, NAD binding domain AKN93_01580 PF01197 Ribosomal protein L31 AKN93_01585 PF17941 Polyphosphate kinase C-terminal domain 1 AKN93_01585 PF13089 Polyphosphate kinase N-terminal domain AKN93_01585 PF13090 Polyphosphate kinase C-terminal domain 2 AKN93_01585 PF02503 Polyphosphate kinase middle domain AKN93_01595 PF00691 OmpA family AKN93_01595 PF01389 OmpA-like transmembrane domain AKN93_01600 PF13018 Extended Signal Peptide of Type V secretion system AKN93_01600 PF03895 YadA-like membrane anchor domain AKN93_01600 PF05658 Head domain of trimeric autotransporter adhesin AKN93_01600 PF05662 Coiled stalk of trimeric autotransporter adhesin AKN93_01605 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AKN93_01605 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AKN93_01610 PF00034 Cytochrome c AKN93_01615 PF01926 50S ribosome-binding GTPase AKN93_01620 PF01734 Patatin-like phospholipase AKN93_01635 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_01640 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_01645 PF00497 Bacterial extracellular solute-binding proteins, family 3 AKN93_01650 PF00005 ABC transporter AKN93_01655 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AKN93_01655 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AKN93_01660 PF00034 Cytochrome c AKN93_01665 PF01926 50S ribosome-binding GTPase AKN93_01670 PF01734 Patatin-like phospholipase AKN93_01685 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_01690 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_01695 PF00497 Bacterial extracellular solute-binding proteins, family 3 AKN93_01700 PF00005 ABC transporter AKN93_01705 PF01557 Fumarylacetoacetate (FAA) hydrolase family AKN93_01710 PF02913 FAD linked oxidases, C-terminal domain AKN93_01710 PF01565 FAD binding domain AKN93_01715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AKN93_01715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AKN93_01720 PF00436 Single-strand binding protein family AKN93_01725 PF07690 Major Facilitator Superfamily AKN93_01730 PF17760 UvrA interaction domain AKN93_01730 PF17755 UvrA DNA-binding domain AKN93_01735 PF06628 Catalase-related immune-responsive AKN93_01735 PF00199 Catalase AKN93_01745 PF07683 Cobalamin synthesis protein cobW C-terminal domain AKN93_01745 PF02492 CobW/HypB/UreG, nucleotide-binding domain AKN93_01755 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AKN93_01755 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AKN93_01760 PF01810 LysE type translocator AKN93_01765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN93_01770 PF00842 Alanine racemase, C-terminal domain AKN93_01770 PF01168 Alanine racemase, N-terminal domain AKN93_01775 PF01266 FAD dependent oxidoreductase AKN93_01780 PF01037 Lrp/AsnC ligand binding domain AKN93_01785 PF00471 Ribosomal protein L33 AKN93_01790 PF00830 Ribosomal L28 family AKN93_01795 PF04002 RadC-like JAB domain AKN93_01800 PF02441 Flavoprotein AKN93_01800 PF04127 DNA / pantothenate metabolism flavoprotein AKN93_01805 PF00692 dUTPase AKN93_01810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AKN93_01810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AKN93_01810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AKN93_01810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AKN93_01815 PF00696 Amino acid kinase family AKN93_01825 PF00186 Dihydrofolate reductase AKN93_01835 PF01926 50S ribosome-binding GTPase AKN93_01835 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AKN93_01840 PF00210 Ferritin-like domain AKN93_01845 PF04324 BFD-like [2Fe-2S] binding domain AKN93_01860 PF00293 NUDIX domain AKN93_01865 PF02896 PEP-utilising enzyme, TIM barrel domain AKN93_01865 PF00391 PEP-utilising enzyme, mobile domain AKN93_01865 PF05524 PEP-utilising enzyme, N-terminal AKN93_01865 PF01590 GAF domain AKN93_01870 PF04452 RNA methyltransferase AKN93_01880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKN93_01880 PF02770 Acyl-CoA dehydrogenase, middle domain AKN93_01880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKN93_01900 PF00005 ABC transporter AKN93_01905 PF01032 FecCD transport family AKN93_01910 PF01032 FecCD transport family AKN93_01915 PF01497 Periplasmic binding protein AKN93_01920 PF05690 Thiazole biosynthesis protein ThiG AKN93_01930 PF03601 Conserved hypothetical protein 698 AKN93_01940 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AKN93_01940 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AKN93_01950 PF03480 Bacterial extracellular solute-binding protein, family 7 AKN93_01955 PF00155 Aminotransferase class I and II AKN93_01955 PF00392 Bacterial regulatory proteins, gntR family AKN93_01960 PF01266 FAD dependent oxidoreductase AKN93_01970 PF08406 CbbQ/NirQ/NorQ C-terminal AKN93_01970 PF07728 AAA domain (dynein-related subfamily) AKN93_01970 PF12556 Cobaltochelatase CobS subunit N terminal AKN93_01975 PF06213 Cobalamin biosynthesis protein CobT AKN93_01975 PF11775 Cobalamin biosynthesis protein CobT VWA domain AKN93_01975 PF06213 Cobalamin biosynthesis protein CobT AKN93_01975 PF11775 Cobalamin biosynthesis protein CobT VWA domain AKN93_01990 PF01925 Sulfite exporter TauE/SafE AKN93_01995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AKN93_01995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AKN93_01995 PF00205 Thiamine pyrophosphate enzyme, central domain AKN93_02000 PF01614 Bacterial transcriptional regulator AKN93_02000 PF09339 IclR helix-turn-helix domain AKN93_02010 PF07715 TonB-dependent Receptor Plug Domain AKN93_02010 PF00593 TonB dependent receptor AKN93_02015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_02015 PF03466 LysR substrate binding domain AKN93_02020 PF01266 FAD dependent oxidoreductase AKN93_02025 PF01042 Endoribonuclease L-PSP AKN93_02030 PF01168 Alanine racemase, N-terminal domain AKN93_02030 PF00842 Alanine racemase, C-terminal domain AKN93_02035 PF00202 Aminotransferase class-III AKN93_02040 PF00171 Aldehyde dehydrogenase family AKN93_02045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AKN93_02045 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AKN93_02055 PF03480 Bacterial extracellular solute-binding protein, family 7 AKN93_02065 PF00465 Iron-containing alcohol dehydrogenase AKN93_02070 PF17191 RecG wedge domain AKN93_02070 PF00271 Helicase conserved C-terminal domain AKN93_02070 PF00270 DEAD/DEAH box helicase AKN93_02075 PF03466 LysR substrate binding domain AKN93_02075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_02090 PF03222 Tryptophan/tyrosine permease family AKN93_02095 PF00884 Sulfatase AKN93_02100 PF04055 Radical SAM superfamily AKN93_02100 PF06463 Molybdenum Cofactor Synthesis C AKN93_02110 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_02115 PF03459 TOBE domain AKN93_02115 PF00005 ABC transporter AKN93_02130 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_02135 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_02140 PF08402 TOBE domain AKN93_02140 PF00005 ABC transporter AKN93_02145 PF13416 Bacterial extracellular solute-binding protein AKN93_02150 PF13416 Bacterial extracellular solute-binding protein AKN93_02155 PF01322 Cytochrome C' AKN93_02160 PF01476 LysM domain AKN93_02160 PF04972 BON domain AKN93_02165 PF00732 GMC oxidoreductase AKN93_02165 PF05199 GMC oxidoreductase AKN93_02175 PF00171 Aldehyde dehydrogenase family AKN93_02185 PF00438 S-adenosylmethionine synthetase, N-terminal domain AKN93_02185 PF02772 S-adenosylmethionine synthetase, central domain AKN93_02185 PF02773 S-adenosylmethionine synthetase, C-terminal domain AKN93_02195 PF01479 S4 domain AKN93_02200 PF02556 Preprotein translocase subunit SecB AKN93_02205 PF00462 Glutaredoxin AKN93_02210 PF00581 Rhodanese-like domain AKN93_02215 PF01676 Metalloenzyme superfamily AKN93_02215 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AKN93_02220 PF01551 Peptidase family M23 AKN93_02225 PF13180 PDZ domain AKN93_02225 PF03572 Peptidase family S41 AKN93_02235 PF00977 Histidine biosynthesis protein AKN93_02240 PF00977 Histidine biosynthesis protein AKN93_02245 PF00117 Glutamine amidotransferase class-I AKN93_02250 PF00475 Imidazoleglycerol-phosphate dehydratase AKN93_02265 PF00633 Helix-hairpin-helix motif AKN93_02265 PF00730 HhH-GPD superfamily base excision DNA repair protein AKN93_02265 PF14815 NUDIX domain AKN93_02265 PF10576 Iron-sulfur binding domain of endonuclease III AKN93_02270 PF04362 Bacterial Fe(2+) trafficking AKN93_02290 PF03060 Nitronate monooxygenase AKN93_02295 PF04264 YceI-like domain AKN93_02300 PF01292 Prokaryotic cytochrome b561 AKN93_02305 PF00127 Copper binding proteins, plastocyanin/azurin family AKN93_02310 PF00210 Ferritin-like domain AKN93_02315 PF01116 Fructose-bisphosphate aldolase class-II AKN93_02320 PF00162 Phosphoglycerate kinase AKN93_02325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AKN93_02325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AKN93_02330 PF00456 Transketolase, thiamine diphosphate binding domain AKN93_02330 PF02780 Transketolase, C-terminal domain AKN93_02330 PF02779 Transketolase, pyrimidine binding domain AKN93_02335 PF00156 Phosphoribosyl transferase domain AKN93_02345 PF00933 Glycosyl hydrolase family 3 N terminal domain AKN93_02345 PF14310 Fibronectin type III-like domain AKN93_02345 PF01915 Glycosyl hydrolase family 3 C-terminal domain AKN93_02350 PF06968 Biotin and Thiamin Synthesis associated domain AKN93_02350 PF04055 Radical SAM superfamily AKN93_02355 PF00155 Aminotransferase class I and II AKN93_02360 PF08241 Methyltransferase domain AKN93_02360 PF12697 Alpha/beta hydrolase family AKN93_02365 PF08241 Methyltransferase domain AKN93_02380 PF03453 MoeA N-terminal region (domain I and II) AKN93_02380 PF03454 MoeA C-terminal region (domain IV) AKN93_02380 PF00994 Probable molybdopterin binding domain AKN93_02385 PF00994 Probable molybdopterin binding domain AKN93_02390 PF12804 MobA-like NTP transferase domain AKN93_02395 PF01967 MoaC family AKN93_02410 PF00156 Phosphoribosyl transferase domain AKN93_02435 PF03793 PASTA domain AKN93_02435 PF00069 Protein kinase domain AKN93_02500 PF08340 Domain of unknown function (DUF1732) AKN93_02500 PF03755 YicC-like family, N-terminal region AKN93_02505 PF09905 DNA-binding protein VF530 AKN93_02510 PF01138 3' exoribonuclease family, domain 1 AKN93_02510 PF03725 3' exoribonuclease family, domain 2 AKN93_02540 PF03480 Bacterial extracellular solute-binding protein, family 7 AKN93_02545 PF13361 UvrD-like helicase C-terminal domain AKN93_02545 PF00580 UvrD/REP helicase N-terminal domain AKN93_02550 PF16325 Peptidase family U32 C-terminal domain AKN93_02550 PF01136 Peptidase family U32 AKN93_02560 PF13193 AMP-binding enzyme C-terminal domain AKN93_02560 PF00501 AMP-binding enzyme AKN93_02565 PF00384 Molybdopterin oxidoreductase AKN93_02565 PF01568 Molydopterin dinucleotide binding domain AKN93_02565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AKN93_02570 PF03916 Polysulphide reductase, NrfD AKN93_02575 PF13247 4Fe-4S dicluster domain AKN93_02580 PF02386 Cation transport protein AKN93_02585 PF02254 TrkA-N domain AKN93_02585 PF02080 TrkA-C domain AKN93_02590 PF01189 16S rRNA methyltransferase RsmB/F AKN93_02590 PF01029 NusB family AKN93_02595 PF02911 Formyl transferase, C-terminal domain AKN93_02595 PF00551 Formyl transferase AKN93_02600 PF01327 Polypeptide deformylase AKN93_02610 PF17782 DprA winged helix domain AKN93_02610 PF02481 DNA recombination-mediator protein A AKN93_02615 PF01300 Telomere recombination AKN93_02620 PF01218 Coproporphyrinogen III oxidase AKN93_02625 PF08501 Shikimate dehydrogenase substrate binding domain AKN93_02625 PF01488 Shikimate / quinate 5-dehydrogenase AKN93_02625 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AKN93_02630 PF01769 Divalent cation transporter AKN93_02630 PF00571 CBS domain AKN93_02630 PF03448 MgtE intracellular N domain AKN93_02635 PF02308 MgtC family AKN93_02640 PF02374 Anion-transporting ATPase AKN93_02640 PF17886 HSP20-like domain found in ArsA AKN93_02650 PF02554 Carbon starvation protein CstA AKN93_02650 PF13722 5TM C-terminal transporter carbon starvation CstA AKN93_02670 PF00202 Aminotransferase class-III AKN93_02675 PF06827 Zinc finger found in FPG and IleRS AKN93_02675 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AKN93_02675 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AKN93_02680 PF01925 Sulfite exporter TauE/SafE AKN93_02685 PF01790 Prolipoprotein diacylglyceryl transferase AKN93_02690 PF00303 Thymidylate synthase AKN93_02710 PF02036 SCP-2 sterol transfer family AKN93_02715 PF01136 Peptidase family U32 AKN93_02720 PF01136 Peptidase family U32 AKN93_02725 PF00962 Adenosine/AMP deaminase AKN93_02740 PF01653 NAD-dependent DNA ligase adenylation domain AKN93_02740 PF03120 NAD-dependent DNA ligase OB-fold domain AKN93_02755 PF00291 Pyridoxal-phosphate dependent enzyme AKN93_02755 PF00585 C-terminal regulatory domain of Threonine dehydratase AKN93_02760 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AKN93_02765 PF00710 Asparaginase, N-terminal AKN93_02765 PF17763 Glutaminase/Asparaginase C-terminal domain AKN93_02770 PF00892 EamA-like transporter family AKN93_02795 PF00005 ABC transporter AKN93_02795 PF00664 ABC transporter transmembrane region AKN93_02800 PF00571 CBS domain AKN93_02800 PF01368 DHH family AKN93_02800 PF02272 DHHA1 domain AKN93_02800 PF01743 Poly A polymerase head domain AKN93_02800 PF12627 Probable RNA and SrmB- binding site of polymerase A AKN93_02810 PF13411 MerR HTH family regulatory protein AKN93_02825 PF03466 LysR substrate binding domain AKN93_02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_02830 PF03060 Nitronate monooxygenase AKN93_02845 PF01380 SIS domain AKN93_02850 PF00920 Dehydratase family AKN93_02865 PF03594 Benzoate membrane transport protein AKN93_02870 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_02875 PF08669 Glycine cleavage T-protein C-terminal barrel domain AKN93_02875 PF01571 Aminomethyltransferase folate-binding domain AKN93_02880 PF01597 Glycine cleavage H-protein AKN93_02885 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AKN93_02885 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AKN93_02895 PF03480 Bacterial extracellular solute-binding protein, family 7 AKN93_02915 PF05193 Peptidase M16 inactive domain AKN93_02920 PF00675 Insulinase (Peptidase family M16) AKN93_02920 PF05193 Peptidase M16 inactive domain AKN93_02930 PF00448 SRP54-type protein, GTPase domain AKN93_02930 PF02881 SRP54-type protein, helical bundle domain AKN93_02935 PF00005 ABC transporter AKN93_02940 PF18075 FtsX extracellular domain AKN93_02945 PF04542 Sigma-70 region 2 AKN93_02945 PF04545 Sigma-70, region 4 AKN93_02945 PF00140 Sigma-70 factor, region 1.2 AKN93_02950 PF03956 Lysine exporter LysO AKN93_02955 PF00324 Amino acid permease AKN93_02960 PF13361 UvrD-like helicase C-terminal domain AKN93_02960 PF00580 UvrD/REP helicase N-terminal domain AKN93_02965 PF02028 BCCT, betaine/carnitine/choline family transporter AKN93_02970 PF00270 DEAD/DEAH box helicase AKN93_02970 PF00271 Helicase conserved C-terminal domain AKN93_02975 PF02219 Methylenetetrahydrofolate reductase AKN93_02980 PF05221 S-adenosyl-L-homocysteine hydrolase AKN93_02980 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AKN93_02995 PF01527 Transposase AKN93_03000 PF00665 Integrase core domain AKN93_03035 PF07670 Nucleoside recognition AKN93_03040 PF01510 N-acetylmuramoyl-L-alanine amidase AKN93_03050 PF12804 MobA-like NTP transferase domain AKN93_03050 PF00132 Bacterial transferase hexapeptide (six repeats) AKN93_03055 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AKN93_03055 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AKN93_03060 PF02874 ATP synthase alpha/beta family, beta-barrel domain AKN93_03060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AKN93_03065 PF00231 ATP synthase AKN93_03070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AKN93_03070 PF00306 ATP synthase alpha/beta chain, C terminal domain AKN93_03070 PF02874 ATP synthase alpha/beta family, beta-barrel domain AKN93_03075 PF00213 ATP synthase delta (OSCP) subunit AKN93_03080 PF00430 ATP synthase B/B' CF(0) AKN93_03085 PF00137 ATP synthase subunit C AKN93_03090 PF00119 ATP synthase A chain AKN93_03095 PF03899 ATP synthase I chain AKN93_03100 PF02195 ParB-like nuclease domain AKN93_03100 PF17762 HTH domain found in ParB protein AKN93_03105 PF13614 AAA domain AKN93_03110 PF02527 rRNA small subunit methyltransferase G AKN93_03115 PF13932 GidA associated domain AKN93_03115 PF01134 Glucose inhibited division protein A AKN93_03120 PF12631 MnmE helical domain AKN93_03120 PF10396 GTP-binding protein TrmE N-terminus AKN93_03120 PF01926 50S ribosome-binding GTPase AKN93_03125 PF14849 YidC periplasmic domain AKN93_03125 PF02096 60Kd inner membrane protein AKN93_03130 PF01809 Putative membrane protein insertion efficiency factor AKN93_03135 PF00825 Ribonuclease P AKN93_03140 PF00468 Ribosomal protein L34 AKN93_03145 PF10011 Predicted membrane protein (DUF2254) AKN93_03150 PF00376 MerR family regulatory protein AKN93_03150 PF09278 MerR, DNA binding AKN93_03155 PF00403 Heavy-metal-associated domain AKN93_03170 PF00892 EamA-like transporter family AKN93_03175 PF00132 Bacterial transferase hexapeptide (six repeats) AKN93_03180 PF01432 Peptidase family M3 AKN93_03190 PF01192 RNA polymerase Rpb6 AKN93_03195 PF13291 ACT domain AKN93_03195 PF04607 Region found in RelA / SpoT proteins AKN93_03195 PF02824 TGS domain AKN93_03200 PF01042 Endoribonuclease L-PSP AKN93_03205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN93_03210 PF02630 SCO1/SenC AKN93_03215 PF01636 Phosphotransferase enzyme family AKN93_03225 PF04241 Protein of unknown function (DUF423) AKN93_03230 PF05690 Thiazole biosynthesis protein ThiG AKN93_03230 PF02597 ThiS family AKN93_03235 PF05690 Thiazole biosynthesis protein ThiG AKN93_03240 PF02390 Putative methyltransferase AKN93_03245 PF00625 Guanylate kinase AKN93_03260 PF01926 50S ribosome-binding GTPase AKN93_03260 PF07650 KH domain AKN93_03265 PF03600 Citrate transporter AKN93_03270 PF00970 Oxidoreductase FAD-binding domain AKN93_03270 PF00175 Oxidoreductase NAD-binding domain AKN93_03275 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AKN93_03280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AKN93_03280 PF07497 Rho termination factor, RNA-binding domain AKN93_03280 PF07498 Rho termination factor, N-terminal domain AKN93_03285 PF00085 Thioredoxin AKN93_03290 PF02541 Ppx/GppA phosphatase family AKN93_03300 PF08299 Bacterial dnaA protein helix-turn-helix AKN93_03300 PF11638 DnaA N-terminal domain AKN93_03300 PF00308 Bacterial dnaA protein AKN93_03305 PF00712 DNA polymerase III beta subunit, N-terminal domain AKN93_03305 PF02767 DNA polymerase III beta subunit, central domain AKN93_03305 PF02768 DNA polymerase III beta subunit, C-terminal domain AKN93_03310 PF02463 RecF/RecN/SMC N terminal domain AKN93_03315 PF00204 DNA gyrase B AKN93_03315 PF00986 DNA gyrase B subunit, carboxyl terminus AKN93_03315 PF18053 DNA gyrase B subunit insert domain AKN93_03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_03315 PF01751 Toprim domain AKN93_03320 PF00512 His Kinase A (phospho-acceptor) domain AKN93_03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_03320 PF08521 Two-component sensor kinase N-terminal AKN93_03325 PF00072 Response regulator receiver domain AKN93_03325 PF00486 Transcriptional regulatory protein, C terminal AKN93_03330 PF11412 Disulphide bond corrector protein DsbC AKN93_03330 PF02683 Cytochrome C biogenesis protein transmembrane region AKN93_03335 PF00578 AhpC/TSA family AKN93_03340 PF13098 Thioredoxin-like domain AKN93_03345 PF00290 Tryptophan synthase alpha chain AKN93_03350 PF00291 Pyridoxal-phosphate dependent enzyme AKN93_03355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_03355 PF03466 LysR substrate binding domain AKN93_03360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKN93_03360 PF12806 Acetyl-CoA dehydrogenase C-terminal like AKN93_03360 PF02770 Acyl-CoA dehydrogenase, middle domain AKN93_03360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKN93_03370 PF01208 Uroporphyrinogen decarboxylase (URO-D) AKN93_03375 PF03466 LysR substrate binding domain AKN93_03375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_03380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AKN93_03390 PF01292 Prokaryotic cytochrome b561 AKN93_03395 PF12805 FUSC-like inner membrane protein yccS AKN93_03400 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AKN93_03400 PF18381 YcaO cyclodehydratase C-terminal domain AKN93_03405 PF12833 Helix-turn-helix domain AKN93_03405 PF02311 AraC-like ligand binding domain AKN93_03410 PF13593 SBF-like CPA transporter family (DUF4137) AKN93_03415 PF02597 ThiS family AKN93_03420 PF02391 MoaE protein AKN93_03425 PF00994 Probable molybdopterin binding domain AKN93_03425 PF03454 MoeA C-terminal region (domain IV) AKN93_03425 PF03453 MoeA N-terminal region (domain I and II) AKN93_03430 PF01258 Prokaryotic dksA/traR C4-type zinc finger AKN93_03435 PF03459 TOBE domain AKN93_03435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_03440 PF00512 His Kinase A (phospho-acceptor) domain AKN93_03440 PF08521 Two-component sensor kinase N-terminal AKN93_03440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_03445 PF00072 Response regulator receiver domain AKN93_03445 PF00486 Transcriptional regulatory protein, C terminal AKN93_03450 PF00884 Sulfatase AKN93_03465 PF01804 Penicillin amidase AKN93_03480 PF01026 TatD related DNase AKN93_03485 PF00009 Elongation factor Tu GTP binding domain AKN93_03485 PF03144 Elongation factor Tu domain 2 AKN93_03485 PF16658 Class II release factor RF3, C-terminal domain AKN93_03490 PF01863 Protein of unknown function DUF45 AKN93_03495 PF00011 Hsp20/alpha crystallin family AKN93_03500 PF00593 TonB dependent receptor AKN93_03500 PF07715 TonB-dependent Receptor Plug Domain AKN93_03505 PF00009 Elongation factor Tu GTP binding domain AKN93_03510 PF01507 Phosphoadenosine phosphosulfate reductase family AKN93_03515 PF01507 Phosphoadenosine phosphosulfate reductase family AKN93_03520 PF10414 Sirohaem synthase dimerisation region AKN93_03520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AKN93_03520 PF14824 Sirohaem biosynthesis protein central AKN93_03535 PF00583 Acetyltransferase (GNAT) family AKN93_03535 PF00696 Amino acid kinase family AKN93_03540 PF01384 Phosphate transporter family AKN93_03545 PF01865 Protein of unknown function DUF47 AKN93_03555 PF16200 C-terminal region of band_7 AKN93_03555 PF01145 SPFH domain / Band 7 family AKN93_03570 PF01323 DSBA-like thioredoxin domain AKN93_03580 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AKN93_03580 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AKN93_03585 PF02622 Uncharacterized ACR, COG1678 AKN93_03590 PF03652 Holliday junction resolvase AKN93_03595 PF00156 Phosphoribosyl transferase domain AKN93_03600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AKN93_03600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AKN93_03605 PF01979 Amidohydrolase family AKN93_03610 PF17785 PUA-like domain AKN93_03610 PF10672 S-adenosylmethionine-dependent methyltransferase AKN93_03615 PF06977 SdiA-regulated AKN93_03620 PF00459 Inositol monophosphatase family AKN93_03625 PF00293 NUDIX domain AKN93_03630 PF13419 Haloacid dehalogenase-like hydrolase AKN93_03635 PF01292 Prokaryotic cytochrome b561 AKN93_03640 PF00437 Type II/IV secretion system protein AKN93_03645 PF01168 Alanine racemase, N-terminal domain AKN93_03650 PF03807 NADP oxidoreductase coenzyme F420-dependent AKN93_03650 PF14748 Pyrroline-5-carboxylate reductase dimerisation AKN93_03655 PF02325 YGGT family AKN93_03660 PF02594 Uncharacterised ACR, YggU family COG1872 AKN93_03665 PF00561 alpha/beta hydrolase fold AKN93_03670 PF07021 Methionine biosynthesis protein MetW AKN93_03670 PF00561 alpha/beta hydrolase fold AKN93_03680 PF01725 Ham1 family AKN93_03685 PF04055 Radical SAM superfamily AKN93_03685 PF06969 HemN C-terminal domain AKN93_03690 PF00501 AMP-binding enzyme AKN93_03690 PF01553 Acyltransferase AKN93_03700 PF03466 LysR substrate binding domain AKN93_03700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_03705 PF02525 Flavodoxin-like fold AKN93_03710 PF02678 Pirin AKN93_03710 PF05726 Pirin C-terminal cupin domain AKN93_03715 PF01467 Cytidylyltransferase-like AKN93_03720 PF00037 4Fe-4S binding domain AKN93_03735 PF02091 Glycyl-tRNA synthetase alpha subunit AKN93_03740 PF05746 DALR anticodon binding domain AKN93_03740 PF02092 Glycyl-tRNA synthetase beta subunit AKN93_03765 PF00543 Nitrogen regulatory protein P-II AKN93_03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_03770 PF00512 His Kinase A (phospho-acceptor) domain AKN93_03770 PF00989 PAS fold AKN93_03770 PF11808 Phosphate regulon sensor protein PhoR AKN93_03775 PF00072 Response regulator receiver domain AKN93_03775 PF00486 Transcriptional regulatory protein, C terminal AKN93_03780 PF01040 UbiA prenyltransferase family AKN93_03785 PF04345 Chorismate lyase AKN93_03790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_03790 PF18113 Rubredoxin binding C-terminal domain AKN93_03800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN93_03805 PF00034 Cytochrome c AKN93_03810 PF01078 Magnesium chelatase, subunit ChlI AKN93_03810 PF13335 Magnesium chelatase, subunit ChlI C-terminal AKN93_03815 PF04380 Membrane fusogenic activity AKN93_03825 PF00106 short chain dehydrogenase AKN93_03830 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AKN93_03830 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AKN93_03835 PF00667 FAD binding domain AKN93_03835 PF00258 Flavodoxin AKN93_03835 PF00175 Oxidoreductase NAD-binding domain AKN93_03855 PF00593 TonB dependent receptor AKN93_03855 PF07715 TonB-dependent Receptor Plug Domain AKN93_03865 PF00512 His Kinase A (phospho-acceptor) domain AKN93_03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_03870 PF00072 Response regulator receiver domain AKN93_03870 PF02954 Bacterial regulatory protein, Fis family AKN93_03875 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AKN93_03885 PF01435 Peptidase family M48 AKN93_03895 PF16363 GDP-mannose 4,6 dehydratase AKN93_03900 PF03922 OmpW family AKN93_03905 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AKN93_03910 PF02580 D-Tyr-tRNA(Tyr) deacylase AKN93_03915 PF00464 Serine hydroxymethyltransferase AKN93_03920 PF00005 ABC transporter AKN93_03920 PF12848 ABC transporter AKN93_03925 PF00171 Aldehyde dehydrogenase family AKN93_03930 PF04262 Glutamate-cysteine ligase AKN93_03935 PF17674 HHH domain AKN93_03935 PF00575 S1 RNA binding domain AKN93_03935 PF09371 Tex-like protein N-terminal domain AKN93_03935 PF16921 Tex protein YqgF-like domain AKN93_03940 PF00072 Response regulator receiver domain AKN93_03940 PF00486 Transcriptional regulatory protein, C terminal AKN93_03945 PF00672 HAMP domain AKN93_03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_03945 PF00512 His Kinase A (phospho-acceptor) domain AKN93_03955 PF01475 Ferric uptake regulator family AKN93_03960 PF00005 ABC transporter AKN93_03965 PF00950 ABC 3 transport family AKN93_03975 PF00005 ABC transporter AKN93_03975 PF09383 NIL domain AKN93_03980 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_03985 PF03180 NLPA lipoprotein AKN93_03990 PF02566 OsmC-like protein AKN93_03995 PF02675 S-adenosylmethionine decarboxylase AKN93_04000 PF03232 Ubiquinone biosynthesis protein COQ7 AKN93_04005 PF01230 HIT domain AKN93_04010 PF03653 Uncharacterised protein family (UPF0093) AKN93_04015 PF02774 Semialdehyde dehydrogenase, dimerisation domain AKN93_04015 PF01118 Semialdehyde dehydrogenase, NAD binding domain AKN93_04020 PF01521 Iron-sulphur cluster biosynthesis AKN93_04025 PF03702 Anhydro-N-acetylmuramic acid kinase AKN93_04030 PF01551 Peptidase family M23 AKN93_04030 PF04225 Opacity-associated protein A LysM-like domain AKN93_04035 PF01479 S4 domain AKN93_04035 PF00579 tRNA synthetases class I (W and Y) AKN93_04065 PF03099 Biotin/lipoate A/B protein ligase family AKN93_04065 PF02237 Biotin protein ligase C terminal domain AKN93_04070 PF03309 Type III pantothenate kinase AKN93_04095 PF00009 Elongation factor Tu GTP binding domain AKN93_04095 PF03144 Elongation factor Tu domain 2 AKN93_04095 PF03143 Elongation factor Tu C-terminal domain AKN93_04105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AKN93_04110 PF00467 KOW motif AKN93_04110 PF02357 Transcription termination factor nusG AKN93_04115 PF03946 Ribosomal protein L11, N-terminal domain AKN93_04115 PF00298 Ribosomal protein L11, RNA binding domain AKN93_04120 PF00687 Ribosomal protein L1p/L10e family AKN93_04125 PF00466 Ribosomal protein L10 AKN93_04130 PF00542 Ribosomal protein L7/L12 C-terminal domain AKN93_04130 PF16320 Ribosomal protein L7/L12 dimerisation domain AKN93_04135 PF04563 RNA polymerase beta subunit AKN93_04135 PF04565 RNA polymerase Rpb2, domain 3 AKN93_04135 PF10385 RNA polymerase beta subunit external 1 domain AKN93_04135 PF00562 RNA polymerase Rpb2, domain 6 AKN93_04135 PF04560 RNA polymerase Rpb2, domain 7 AKN93_04135 PF04561 RNA polymerase Rpb2, domain 2 AKN93_04140 PF04998 RNA polymerase Rpb1, domain 5 AKN93_04140 PF00623 RNA polymerase Rpb1, domain 2 AKN93_04140 PF04983 RNA polymerase Rpb1, domain 3 AKN93_04140 PF04997 RNA polymerase Rpb1, domain 1 AKN93_04140 PF05000 RNA polymerase Rpb1, domain 4 AKN93_04145 PF00164 Ribosomal protein S12/S23 AKN93_04150 PF00177 Ribosomal protein S7p/S5e AKN93_04155 PF03144 Elongation factor Tu domain 2 AKN93_04155 PF00009 Elongation factor Tu GTP binding domain AKN93_04155 PF03764 Elongation factor G, domain IV AKN93_04155 PF00679 Elongation factor G C-terminus AKN93_04155 PF14492 Elongation Factor G, domain II AKN93_04160 PF03144 Elongation factor Tu domain 2 AKN93_04160 PF00009 Elongation factor Tu GTP binding domain AKN93_04160 PF03143 Elongation factor Tu C-terminal domain AKN93_04165 PF00338 Ribosomal protein S10p/S20e AKN93_04170 PF00297 Ribosomal protein L3 AKN93_04175 PF00573 Ribosomal protein L4/L1 family AKN93_04180 PF00276 Ribosomal protein L23 AKN93_04185 PF00181 Ribosomal Proteins L2, RNA binding domain AKN93_04185 PF03947 Ribosomal Proteins L2, C-terminal domain AKN93_04190 PF00203 Ribosomal protein S19 AKN93_04195 PF00237 Ribosomal protein L22p/L17e AKN93_04200 PF07650 KH domain AKN93_04200 PF00189 Ribosomal protein S3, C-terminal domain AKN93_04205 PF00252 Ribosomal protein L16p/L10e AKN93_04210 PF00831 Ribosomal L29 protein AKN93_04215 PF00366 Ribosomal protein S17 AKN93_04220 PF00238 Ribosomal protein L14p/L23e AKN93_04225 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AKN93_04225 PF00467 KOW motif AKN93_04230 PF00281 Ribosomal protein L5 AKN93_04230 PF00673 ribosomal L5P family C-terminus AKN93_04235 PF00253 Ribosomal protein S14p/S29e AKN93_04240 PF00410 Ribosomal protein S8 AKN93_04245 PF00347 Ribosomal protein L6 AKN93_04250 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AKN93_04255 PF03719 Ribosomal protein S5, C-terminal domain AKN93_04255 PF00333 Ribosomal protein S5, N-terminal domain AKN93_04260 PF00327 Ribosomal protein L30p/L7e AKN93_04265 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AKN93_04270 PF00344 SecY translocase AKN93_04275 PF00416 Ribosomal protein S13/S18 AKN93_04280 PF00411 Ribosomal protein S11 AKN93_04285 PF01479 S4 domain AKN93_04285 PF00163 Ribosomal protein S4/S9 N-terminal domain AKN93_04290 PF01000 RNA polymerase Rpb3/RpoA insert domain AKN93_04290 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AKN93_04290 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AKN93_04295 PF01196 Ribosomal protein L17 AKN93_04315 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AKN93_04315 PF00437 Type II/IV secretion system protein AKN93_04320 PF00482 Type II secretion system (T2SS), protein F AKN93_04325 PF06750 Bacterial Peptidase A24 N-terminal domain AKN93_04325 PF01478 Type IV leader peptidase family AKN93_04350 PF03471 Transporter associated domain AKN93_04350 PF00999 Sodium/hydrogen exchanger family AKN93_04350 PF02080 TrkA-C domain AKN93_04355 PF12795 Mechanosensitive ion channel porin domain AKN93_04355 PF12794 Mechanosensitive ion channel inner membrane domain 1 AKN93_04355 PF00924 Mechanosensitive ion channel AKN93_04360 PF01263 Aldose 1-epimerase AKN93_04365 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AKN93_04385 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AKN93_04390 PF14579 Helix-hairpin-helix motif AKN93_04390 PF14480 DNA polymerase III polC-type N-terminus I AKN93_04390 PF11490 DNA polymerase III polC-type N-terminus II AKN93_04390 PF07733 Bacterial DNA polymerase III alpha NTPase domain AKN93_04390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AKN93_04390 PF02811 PHP domain AKN93_04390 PF00929 Exonuclease AKN93_04400 PF01274 Malate synthase AKN93_04415 PF07396 Phosphate-selective porin O and P AKN93_04425 PF00892 EamA-like transporter family AKN93_04430 PF02311 AraC-like ligand binding domain AKN93_04430 PF12833 Helix-turn-helix domain AKN93_04435 PF00490 Delta-aminolevulinic acid dehydratase AKN93_04440 PF02592 Putative vitamin uptake transporter AKN93_04445 PF00206 Lyase AKN93_04445 PF10415 Fumarase C C-terminus AKN93_04455 PF02770 Acyl-CoA dehydrogenase, middle domain AKN93_04455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKN93_04455 PF12806 Acetyl-CoA dehydrogenase C-terminal like AKN93_04455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKN93_04465 PF00501 AMP-binding enzyme AKN93_04465 PF13193 AMP-binding enzyme C-terminal domain AKN93_04470 PF13426 PAS domain AKN93_04470 PF08447 PAS fold AKN93_04470 PF00989 PAS fold AKN93_04470 PF00512 His Kinase A (phospho-acceptor) domain AKN93_04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_04470 PF13493 Domain of unknown function (DUF4118) AKN93_04475 PF00196 Bacterial regulatory proteins, luxR family AKN93_04475 PF00072 Response regulator receiver domain AKN93_04480 PF01966 HD domain AKN93_04480 PF01743 Poly A polymerase head domain AKN93_04480 PF12627 Probable RNA and SrmB- binding site of polymerase A AKN93_04485 PF10417 C-terminal domain of 1-Cys peroxiredoxin AKN93_04485 PF00578 AhpC/TSA family AKN93_04490 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_04490 PF13192 Thioredoxin domain AKN93_04505 PF04545 Sigma-70, region 4 AKN93_04505 PF04539 Sigma-70 region 3 AKN93_04505 PF04542 Sigma-70 region 2 AKN93_04505 PF00140 Sigma-70 factor, region 1.2 AKN93_04505 PF03979 Sigma-70 factor, region 1.1 AKN93_04505 PF04546 Sigma-70, non-essential region AKN93_04510 PF13662 Toprim domain AKN93_04510 PF08278 DNA primase DnaG DnaB-binding AKN93_04510 PF01807 CHC2 zinc finger AKN93_04510 PF08275 DNA primase catalytic core, N-terminal domain AKN93_04510 PF10410 DnaB-helicase binding domain of primase AKN93_04515 PF01165 Ribosomal protein S21 AKN93_04520 PF00814 Glycoprotease family AKN93_04525 PF02660 Glycerol-3-phosphate acyltransferase AKN93_04530 PF02152 Dihydroneopterin aldolase AKN93_04535 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AKN93_04540 PF03788 LrgA family AKN93_04545 PF04172 LrgB-like family AKN93_04550 PF00294 pfkB family carbohydrate kinase AKN93_04550 PF01467 Cytidylyltransferase-like AKN93_04555 PF00248 Aldo/keto reductase family AKN93_04560 PF01266 FAD dependent oxidoreductase AKN93_04565 PF00375 Sodium:dicarboxylate symporter family AKN93_04575 PF02508 Rnf-Nqr subunit, membrane protein AKN93_04580 PF04205 FMN-binding domain AKN93_04585 PF03116 NQR2, RnfD, RnfE family AKN93_04590 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AKN93_04590 PF13375 RnfC Barrel sandwich hybrid domain AKN93_04590 PF12838 4Fe-4S dicluster domain AKN93_04590 PF10531 SLBB domain AKN93_04595 PF04060 Putative Fe-S cluster AKN93_04600 PF02508 Rnf-Nqr subunit, membrane protein AKN93_04610 PF00474 Sodium:solute symporter family AKN93_04620 PF00677 Lumazine binding domain AKN93_04625 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AKN93_04625 PF00925 GTP cyclohydrolase II AKN93_04630 PF00885 6,7-dimethyl-8-ribityllumazine synthase AKN93_04635 PF01029 NusB family AKN93_04640 PF00586 AIR synthase related protein, N-terminal domain AKN93_04640 PF02769 AIR synthase related protein, C-terminal domain AKN93_04645 PF04608 Phosphatidylglycerophosphatase A AKN93_04650 PF01435 Peptidase family M48 AKN93_04655 PF01227 GTP cyclohydrolase I AKN93_04660 PF00270 DEAD/DEAH box helicase AKN93_04660 PF04408 Helicase associated domain (HA2) AKN93_04660 PF00271 Helicase conserved C-terminal domain AKN93_04660 PF08482 ATP-dependent helicase C-terminal AKN93_04670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AKN93_04680 PF03480 Bacterial extracellular solute-binding protein, family 7 AKN93_04685 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AKN93_04685 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AKN93_04690 PF00392 Bacterial regulatory proteins, gntR family AKN93_04690 PF07729 FCD domain AKN93_04700 PF00285 Citrate synthase, C-terminal domain AKN93_04705 PF00694 Aconitase C-terminal domain AKN93_04705 PF00330 Aconitase family (aconitate hydratase) AKN93_04710 PF04303 PrpF protein AKN93_04725 PF13533 Biotin-lipoyl like AKN93_04735 PF13193 AMP-binding enzyme C-terminal domain AKN93_04735 PF00501 AMP-binding enzyme AKN93_04740 PF00108 Thiolase, N-terminal domain AKN93_04740 PF02803 Thiolase, C-terminal domain AKN93_04745 PF12833 Helix-turn-helix domain AKN93_04745 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AKN93_04760 PF00072 Response regulator receiver domain AKN93_04760 PF00196 Bacterial regulatory proteins, luxR family AKN93_04765 PF01219 Prokaryotic diacylglycerol kinase AKN93_04770 PF01053 Cys/Met metabolism PLP-dependent enzyme AKN93_04780 PF01139 tRNA-splicing ligase RtcB AKN93_04785 PF08502 LeuA allosteric (dimerisation) domain AKN93_04785 PF00682 HMGL-like AKN93_04800 PF00484 Carbonic anhydrase AKN93_04810 PF02817 e3 binding domain AKN93_04810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AKN93_04810 PF00364 Biotin-requiring enzyme AKN93_04815 PF02780 Transketolase, C-terminal domain AKN93_04815 PF02779 Transketolase, pyrimidine binding domain AKN93_04820 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal AKN93_04820 PF00676 Dehydrogenase E1 component AKN93_04830 PF17768 RecJ OB domain AKN93_04830 PF02272 DHHA1 domain AKN93_04830 PF01368 DHH family AKN93_04840 PF13847 Methyltransferase domain AKN93_04845 PF01612 3'-5' exonuclease AKN93_04845 PF00476 DNA polymerase family A AKN93_04845 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AKN93_04845 PF01367 5'-3' exonuclease, C-terminal SAM fold AKN93_04855 PF01569 PAP2 superfamily AKN93_04860 PF01430 Hsp33 protein AKN93_04865 PF01293 Phosphoenolpyruvate carboxykinase AKN93_04870 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AKN93_04870 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AKN93_04875 PF01418 Helix-turn-helix domain, rpiR family AKN93_04875 PF01380 SIS domain AKN93_04880 PF03061 Thioesterase superfamily AKN93_04890 PF03741 Integral membrane protein TerC family AKN93_04900 PF00005 ABC transporter AKN93_04900 PF12848 ABC transporter AKN93_04905 PF02600 Disulfide bond formation protein DsbB AKN93_04920 PF02602 Uroporphyrinogen-III synthase HemD AKN93_04925 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AKN93_04925 PF03900 Porphobilinogen deaminase, C-terminal domain AKN93_04930 PF04397 LytTr DNA-binding domain AKN93_04930 PF00072 Response regulator receiver domain AKN93_04940 PF00672 HAMP domain AKN93_04940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_04940 PF00512 His Kinase A (phospho-acceptor) domain AKN93_04940 PF01627 Hpt domain AKN93_04940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AKN93_04940 PF00072 Response regulator receiver domain AKN93_04945 PF00291 Pyridoxal-phosphate dependent enzyme AKN93_04950 PF05958 tRNA (Uracil-5-)-methyltransferase AKN93_04950 PF01938 TRAM domain AKN93_04955 PF04607 Region found in RelA / SpoT proteins AKN93_04955 PF02824 TGS domain AKN93_04955 PF13291 ACT domain AKN93_04960 PF03819 MazG nucleotide pyrophosphohydrolase domain AKN93_04965 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AKN93_04970 PF00034 Cytochrome c AKN93_04975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN93_04980 PF01649 Ribosomal protein S20 AKN93_04985 PF03023 Lipid II flippase MurJ AKN93_04990 PF01687 Riboflavin kinase AKN93_04990 PF06574 FAD synthetase AKN93_04995 PF06827 Zinc finger found in FPG and IleRS AKN93_04995 PF00133 tRNA synthetases class I (I, L, M and V) AKN93_04995 PF08264 Anticodon-binding domain of tRNA AKN93_05000 PF01252 Signal peptidase (SPase) II AKN93_05005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKN93_05010 PF02401 LytB protein AKN93_05015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AKN93_05015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AKN93_05025 PF01784 NIF3 (NGG1p interacting factor 3) AKN93_05030 PF07396 Phosphate-selective porin O and P AKN93_05035 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AKN93_05035 PF14489 QueF-like protein AKN93_05040 PF03167 Uracil DNA glycosylase superfamily AKN93_05065 PF03974 Ecotin AKN93_05070 PF01066 CDP-alcohol phosphatidyltransferase AKN93_05075 PF08459 UvrC Helix-hairpin-helix N-terminal AKN93_05075 PF01541 GIY-YIG catalytic domain AKN93_05075 PF02151 UvrB/uvrC motif AKN93_05080 PF00072 Response regulator receiver domain AKN93_05080 PF00196 Bacterial regulatory proteins, luxR family AKN93_05085 PF00570 HRDC domain AKN93_05085 PF01612 3'-5' exonuclease AKN93_05090 PF05166 YcgL domain AKN93_05100 PF05724 Thiopurine S-methyltransferase (TPMT) AKN93_05105 PF12170 DNA polymerase III tau subunit V interacting with alpha AKN93_05105 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AKN93_05105 PF12169 DNA polymerase III subunits gamma and tau domain III AKN93_05110 PF02575 YbaB/EbfC DNA-binding family AKN93_05115 PF02132 RecR protein AKN93_05115 PF13662 Toprim domain AKN93_05125 PF00873 AcrB/AcrD/AcrF family AKN93_05150 PF01882 Protein of unknown function DUF58 AKN93_05155 PF17863 AAA lid domain AKN93_05155 PF07726 ATPase family associated with various cellular activities (AAA) AKN93_05160 PF00849 RNA pseudouridylate synthase AKN93_05165 PF03776 Septum formation topological specificity factor MinE AKN93_05170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AKN93_05175 PF03775 Septum formation inhibitor MinC, C-terminal domain AKN93_05175 PF05209 Septum formation inhibitor MinC, N-terminal domain AKN93_05180 PF03279 Bacterial lipid A biosynthesis acyltransferase AKN93_05190 PF04333 MlaA lipoprotein AKN93_05200 PF09334 tRNA synthetases class I (M) AKN93_05200 PF01588 Putative tRNA binding domain AKN93_05205 PF10609 NUBPL iron-transfer P-loop NTPase AKN93_05210 PF00313 'Cold-shock' DNA-binding domain AKN93_05215 PF00692 dUTPase AKN93_05230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_05230 PF03466 LysR substrate binding domain AKN93_05240 PF00311 Phosphoenolpyruvate carboxylase AKN93_05260 PF02311 AraC-like ligand binding domain AKN93_05260 PF12833 Helix-turn-helix domain AKN93_05265 PF00171 Aldehyde dehydrogenase family AKN93_05265 PF01619 Proline dehydrogenase AKN93_05265 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AKN93_05265 PF14850 DNA-binding domain of Proline dehydrogenase AKN93_05270 PF00474 Sodium:solute symporter family AKN93_05280 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AKN93_05285 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AKN93_05290 PF13439 Glycosyltransferase Family 4 AKN93_05290 PF00534 Glycosyl transferases group 1 AKN93_05315 PF16861 Carbamoyltransferase C-terminus AKN93_05315 PF02543 Carbamoyltransferase N-terminus AKN93_05320 PF00534 Glycosyl transferases group 1 AKN93_05320 PF13439 Glycosyltransferase Family 4 AKN93_05350 PF10996 Beta-Casp domain AKN93_05350 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AKN93_05350 PF00753 Metallo-beta-lactamase superfamily AKN93_05365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AKN93_05365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AKN93_05365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AKN93_05370 PF01370 NAD dependent epimerase/dehydratase family AKN93_05390 PF13439 Glycosyltransferase Family 4 AKN93_05390 PF00534 Glycosyl transferases group 1 AKN93_05395 PF00534 Glycosyl transferases group 1 AKN93_05395 PF13439 Glycosyltransferase Family 4 AKN93_05400 PF00534 Glycosyl transferases group 1 AKN93_05400 PF13477 Glycosyl transferase 4-like AKN93_05410 PF01370 NAD dependent epimerase/dehydratase family AKN93_05415 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AKN93_05415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AKN93_05415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AKN93_05420 PF02397 Bacterial sugar transferase AKN93_05425 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AKN93_05430 PF02719 Polysaccharide biosynthesis protein AKN93_05450 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_05465 PF03330 Lytic transglycolase AKN93_05470 PF02934 GatB/GatE catalytic domain AKN93_05470 PF02637 GatB domain AKN93_05480 PF01425 Amidase AKN93_05485 PF02686 Glu-tRNAGln amidotransferase C subunit AKN93_05495 PF04085 rod shape-determining protein MreC AKN93_05505 PF02545 Maf-like protein AKN93_05510 PF10150 Ribonuclease E/G family AKN93_05510 PF00575 S1 RNA binding domain AKN93_05520 PF02463 RecF/RecN/SMC N terminal domain AKN93_05525 PF01025 GrpE AKN93_05530 PF00012 Hsp70 protein AKN93_05535 PF01556 DnaJ C terminal domain AKN93_05535 PF00684 DnaJ central domain AKN93_05535 PF00226 DnaJ domain AKN93_05540 PF05173 Dihydrodipicolinate reductase, C-terminus AKN93_05540 PF01113 Dihydrodipicolinate reductase, N-terminus AKN93_05545 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AKN93_05545 PF00117 Glutamine amidotransferase class-I AKN93_05550 PF01810 LysE type translocator AKN93_05555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKN93_05555 PF02142 MGS-like domain AKN93_05555 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AKN93_05560 PF01272 Transcription elongation factor, GreA/GreB, C-term AKN93_05560 PF03449 Transcription elongation factor, N-terminal AKN93_05570 PF01985 CRS1 / YhbY (CRM) domain AKN93_05575 PF01728 FtsJ-like methyltransferase AKN93_05580 PF00004 ATPase family associated with various cellular activities (AAA) AKN93_05580 PF17862 AAA+ lid domain AKN93_05580 PF06480 FtsH Extracellular AKN93_05580 PF01434 Peptidase family M41 AKN93_05585 PF00809 Pterin binding enzyme AKN93_05590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AKN93_05590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AKN93_05590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AKN93_05590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AKN93_05595 PF00121 Triosephosphate isomerase AKN93_05600 PF03840 Preprotein translocase SecG subunit AKN93_05610 PF02576 RimP N-terminal domain AKN93_05610 PF17384 RimP C-terminal SH3 domain AKN93_05615 PF13184 NusA-like KH domain AKN93_05615 PF08529 NusA N-terminal domain AKN93_05615 PF00575 S1 RNA binding domain AKN93_05620 PF00009 Elongation factor Tu GTP binding domain AKN93_05620 PF11987 Translation-initiation factor 2 AKN93_05620 PF04760 Translation initiation factor IF-2, N-terminal region AKN93_05620 PF08364 Bacterial translation initiation factor IF-2 associated region AKN93_05625 PF02033 Ribosome-binding factor A AKN93_05630 PF16198 tRNA pseudouridylate synthase B C-terminal domain AKN93_05630 PF01509 TruB family pseudouridylate synthase (N terminal domain) AKN93_05630 PF09157 Pseudouridine synthase II TruB, C-terminal AKN93_05635 PF00312 Ribosomal protein S15 AKN93_05640 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AKN93_05640 PF01138 3' exoribonuclease family, domain 1 AKN93_05640 PF03725 3' exoribonuclease family, domain 2 AKN93_05640 PF00575 S1 RNA binding domain AKN93_05640 PF00013 KH domain AKN93_05650 PF01435 Peptidase family M48 AKN93_05655 PF10263 SprT-like family AKN93_05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_05665 PF00486 Transcriptional regulatory protein, C terminal AKN93_05665 PF00072 Response regulator receiver domain AKN93_05670 PF00155 Aminotransferase class I and II AKN93_05675 PF00795 Carbon-nitrogen hydrolase AKN93_05680 PF00588 SpoU rRNA Methylase family AKN93_05690 PF02082 Transcriptional regulator AKN93_05695 PF00266 Aminotransferase class-V AKN93_05700 PF01592 NifU-like N terminal domain AKN93_05705 PF01521 Iron-sulphur cluster biosynthesis AKN93_05710 PF07743 HSCB C-terminal oligomerisation domain AKN93_05710 PF00226 DnaJ domain AKN93_05715 PF00012 Hsp70 protein AKN93_05720 PF00111 2Fe-2S iron-sulfur cluster binding domain AKN93_05725 PF04384 Iron-sulphur cluster assembly AKN93_05730 PF00334 Nucleoside diphosphate kinase AKN93_05735 PF04055 Radical SAM superfamily AKN93_05745 PF13464 Domain of unknown function (DUF4115) AKN93_05750 PF04551 GcpE protein AKN93_05755 PF03129 Anticodon binding domain AKN93_05755 PF13393 Histidyl-tRNA synthetase AKN93_05765 PF13360 PQQ-like domain AKN93_05770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AKN93_05770 PF01926 50S ribosome-binding GTPase AKN93_05780 PF01126 Heme oxygenase AKN93_05805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AKN93_05805 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_05810 PF00575 S1 RNA binding domain AKN93_05810 PF12111 Polyribonucleotide phosphorylase C terminal AKN93_05810 PF10150 Ribonuclease E/G family AKN93_05815 PF00849 RNA pseudouridylate synthase AKN93_05815 PF01479 S4 domain AKN93_05820 PF13419 Haloacid dehalogenase-like hydrolase AKN93_05825 PF06965 Na+/H+ antiporter 1 AKN93_05825 PF01343 Peptidase family S49 AKN93_05830 PF02545 Maf-like protein AKN93_05835 PF00448 SRP54-type protein, GTPase domain AKN93_05835 PF02881 SRP54-type protein, helical bundle domain AKN93_05835 PF02978 Signal peptide binding domain AKN93_05840 PF00886 Ribosomal protein S16 AKN93_05845 PF05239 PRC-barrel domain AKN93_05845 PF01782 RimM N-terminal domain AKN93_05850 PF01746 tRNA (Guanine-1)-methyltransferase AKN93_05855 PF01245 Ribosomal protein L19 AKN93_05860 PF03591 AzlC protein AKN93_05870 PF04972 BON domain AKN93_05875 PF13580 SIS domain AKN93_05880 PF02021 Uncharacterised protein family UPF0102 AKN93_05885 PF04348 LppC putative lipoprotein AKN93_05890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AKN93_05895 PF05958 tRNA (Uracil-5-)-methyltransferase AKN93_05910 PF06146 Phosphate-starvation-inducible E AKN93_05920 PF00795 Carbon-nitrogen hydrolase AKN93_05930 PF04751 Protein of unknown function (DUF615) AKN93_05935 PF01523 Putative modulator of DNA gyrase AKN93_05940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AKN93_05940 PF00205 Thiamine pyrophosphate enzyme, central domain AKN93_05940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AKN93_05945 PF10369 Small subunit of acetolactate synthase AKN93_05950 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AKN93_05950 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AKN93_05955 PF01066 CDP-alcohol phosphatidyltransferase AKN93_05985 PF08003 Protein of unknown function (DUF1698) AKN93_05990 PF13649 Methyltransferase domain AKN93_06000 PF01416 tRNA pseudouridine synthase AKN93_06005 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AKN93_06010 PF01039 Carboxyl transferase domain AKN93_06010 PF17848 Acetyl-coA carboxylase zinc finger domain AKN93_06015 PF02875 Mur ligase family, glutamate ligase domain AKN93_06015 PF08245 Mur ligase middle domain AKN93_06025 PF02674 Colicin V production protein AKN93_06030 PF00156 Phosphoribosyl transferase domain AKN93_06035 PF01053 Cys/Met metabolism PLP-dependent enzyme AKN93_06040 PF08411 Exonuclease C-terminal AKN93_06040 PF00929 Exonuclease AKN93_06050 PF06969 HemN C-terminal domain AKN93_06050 PF04055 Radical SAM superfamily AKN93_06055 PF13091 PLD-like domain AKN93_06060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKN93_06060 PF05698 Bacterial trigger factor protein (TF) C-terminus AKN93_06060 PF05697 Bacterial trigger factor protein (TF) AKN93_06065 PF00574 Clp protease AKN93_06070 PF07724 AAA domain (Cdc48 subfamily) AKN93_06070 PF10431 C-terminal, D2-small domain, of ClpB protein AKN93_06070 PF06689 ClpX C4-type zinc finger AKN93_06075 PF00004 ATPase family associated with various cellular activities (AAA) AKN93_06075 PF05362 Lon protease (S16) C-terminal proteolytic domain AKN93_06075 PF02190 ATP-dependent protease La (LON) substrate-binding domain AKN93_06080 PF00216 Bacterial DNA-binding protein AKN93_06085 PF13145 PPIC-type PPIASE domain AKN93_06090 PF06794 Uncharacterised protein family (UPF0270) AKN93_06095 PF03358 NADPH-dependent FMN reductase AKN93_06100 PF13726 Na+-H+ antiporter family AKN93_06100 PF03553 Na+/H+ antiporter family AKN93_06105 PF04261 Dyp-type peroxidase family AKN93_06110 PF01668 SmpB protein AKN93_06115 PF03364 Polyketide cyclase / dehydrase and lipid transport AKN93_06120 PF03658 RnfH family Ubiquitin AKN93_06125 PF04355 SmpA / OmlA family AKN93_06130 PF01475 Ferric uptake regulator family AKN93_06135 PF03976 Polyphosphate kinase 2 (PPK2) AKN93_06140 PF04245 37-kD nucleoid-associated bacterial protein AKN93_06145 PF01205 Uncharacterized protein family UPF0029 AKN93_06155 PF04320 Protein with unknown function (DUF469) AKN93_06165 PF00296 Luciferase-like monooxygenase AKN93_06175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN93_06175 PF13360 PQQ-like domain AKN93_06180 PF00156 Phosphoribosyl transferase domain AKN93_06195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AKN93_06195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AKN93_06200 PF01261 Xylose isomerase-like TIM barrel AKN93_06205 PF01027 Inhibitor of apoptosis-promoting Bax1 AKN93_06245 PF00202 Aminotransferase class-III AKN93_06250 PF02581 Thiamine monophosphate synthase AKN93_06255 PF08543 Phosphomethylpyrimidine kinase AKN93_06255 PF02581 Thiamine monophosphate synthase AKN93_06270 PF08264 Anticodon-binding domain of tRNA AKN93_06270 PF00133 tRNA synthetases class I (I, L, M and V) AKN93_06270 PF13603 Leucyl-tRNA synthetase, Domain 2 AKN93_06270 PF09334 tRNA synthetases class I (M) AKN93_06280 PF01266 FAD dependent oxidoreductase AKN93_06280 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AKN93_06285 PF07729 FCD domain AKN93_06285 PF00392 Bacterial regulatory proteins, gntR family AKN93_06290 PF02463 RecF/RecN/SMC N terminal domain AKN93_06290 PF06470 SMC proteins Flexible Hinge Domain AKN93_06295 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AKN93_06300 PF02464 Competence-damaged protein AKN93_06305 PF00154 recA bacterial DNA recombination protein AKN93_06310 PF02631 RecX family AKN93_06325 PF00271 Helicase conserved C-terminal domain AKN93_06325 PF00270 DEAD/DEAH box helicase AKN93_06340 PF02381 MraZ protein, putative antitoxin-like AKN93_06345 PF01795 MraW methylase family AKN93_06350 PF04999 Cell division protein FtsL AKN93_06355 PF03717 Penicillin-binding Protein dimerisation domain AKN93_06355 PF00905 Penicillin binding protein transpeptidase domain AKN93_06360 PF08245 Mur ligase middle domain AKN93_06360 PF01225 Mur ligase family, catalytic domain AKN93_06360 PF02875 Mur ligase family, glutamate ligase domain AKN93_06365 PF01225 Mur ligase family, catalytic domain AKN93_06365 PF08245 Mur ligase middle domain AKN93_06365 PF02875 Mur ligase family, glutamate ligase domain AKN93_06370 PF00953 Glycosyl transferase family 4 AKN93_06370 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AKN93_06375 PF02875 Mur ligase family, glutamate ligase domain AKN93_06375 PF08245 Mur ligase middle domain AKN93_06380 PF01098 Cell cycle protein AKN93_06385 PF04101 Glycosyltransferase family 28 C-terminal domain AKN93_06385 PF03033 Glycosyltransferase family 28 N-terminal domain AKN93_06390 PF02875 Mur ligase family, glutamate ligase domain AKN93_06390 PF08245 Mur ligase middle domain AKN93_06390 PF01225 Mur ligase family, catalytic domain AKN93_06395 PF01820 D-ala D-ala ligase N-terminus AKN93_06395 PF07478 D-ala D-ala ligase C-terminus AKN93_06400 PF03799 Cell division protein FtsQ AKN93_06400 PF08478 POTRA domain, FtsQ-type AKN93_06405 PF02491 SHS2 domain inserted in FTSA AKN93_06410 PF00091 Tubulin/FtsZ family, GTPase domain AKN93_06410 PF12327 FtsZ family, C-terminal domain AKN93_06415 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AKN93_06425 PF02810 SEC-C motif AKN93_06425 PF07517 SecA DEAD-like domain AKN93_06425 PF01043 SecA preprotein cross-linking domain AKN93_06425 PF07516 SecA Wing and Scaffold domain AKN93_06430 PF01960 ArgJ family AKN93_06435 PF00293 NUDIX domain AKN93_06440 PF01923 Cobalamin adenosyltransferase AKN93_06445 PF02558 Ketopantoate reductase PanE/ApbA AKN93_06445 PF08546 Ketopantoate reductase PanE/ApbA C terminal AKN93_06450 PF04461 Protein of unknown function (DUF520) AKN93_06455 PF01541 GIY-YIG catalytic domain AKN93_06455 PF02151 UvrB/uvrC motif AKN93_06455 PF08459 UvrC Helix-hairpin-helix N-terminal AKN93_06465 PF08206 Ribonuclease B OB domain AKN93_06465 PF17876 Cold shock domain AKN93_06465 PF00575 S1 RNA binding domain AKN93_06465 PF00773 RNB domain AKN93_06465 PF08461 Ribonuclease R winged-helix domain AKN93_06470 PF00588 SpoU rRNA Methylase family AKN93_06470 PF08032 RNA 2'-O ribose methyltransferase substrate binding AKN93_06475 PF01250 Ribosomal protein S6 AKN93_06480 PF01084 Ribosomal protein S18 AKN93_06490 PF03948 Ribosomal protein L9, C-terminal domain AKN93_06490 PF01281 Ribosomal protein L9, N-terminal domain AKN93_06495 PF00772 DnaB-like helicase N terminal domain AKN93_06495 PF03796 DnaB-like helicase C terminal domain AKN93_06510 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AKN93_06510 PF02843 Phosphoribosylglycinamide synthetase, C domain AKN93_06510 PF02844 Phosphoribosylglycinamide synthetase, N domain AKN93_06515 PF02142 MGS-like domain AKN93_06515 PF01808 AICARFT/IMPCHase bienzyme AKN93_06520 PF02954 Bacterial regulatory protein, Fis family AKN93_06525 PF01207 Dihydrouridine synthase (Dus) AKN93_06545 PF02586 SOS response associated peptidase (SRAP) AKN93_06550 PF00381 PTS HPr component phosphorylation site AKN93_06555 PF03668 P-loop ATPase protein family AKN93_06560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AKN93_06565 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AKN93_06570 PF00309 Sigma-54 factor, Activator interacting domain (AID) AKN93_06570 PF04552 Sigma-54, DNA binding domain AKN93_06570 PF04963 Sigma-54 factor, core binding domain AKN93_06585 PF13649 Methyltransferase domain AKN93_06595 PF04973 Nicotinamide mononucleotide transporter AKN93_06605 PF01047 MarR family AKN93_06615 PF03461 TRCF domain AKN93_06615 PF00270 DEAD/DEAH box helicase AKN93_06615 PF02559 CarD-like/TRCF domain AKN93_06615 PF17757 UvrB interaction domain AKN93_06615 PF00271 Helicase conserved C-terminal domain AKN93_06620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AKN93_06620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AKN93_06625 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AKN93_06625 PF11973 NQRA C-terminal domain AKN93_06630 PF03116 NQR2, RnfD, RnfE family AKN93_06635 PF04205 FMN-binding domain AKN93_06640 PF02508 Rnf-Nqr subunit, membrane protein AKN93_06645 PF02508 Rnf-Nqr subunit, membrane protein AKN93_06650 PF00175 Oxidoreductase NAD-binding domain AKN93_06650 PF00111 2Fe-2S iron-sulfur cluster binding domain AKN93_06650 PF00970 Oxidoreductase FAD-binding domain AKN93_06655 PF02424 ApbE family AKN93_06665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_06665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AKN93_06675 PF02687 FtsX-like permease family AKN93_06675 PF12704 MacB-like periplasmic core domain AKN93_06680 PF00005 ABC transporter AKN93_06685 PF01435 Peptidase family M48 AKN93_06690 PF00155 Aminotransferase class I and II AKN93_06695 PF01641 SelR domain AKN93_06705 PF00571 CBS domain AKN93_06705 PF03471 Transporter associated domain AKN93_06705 PF01595 Cyclin M transmembrane N-terminal domain AKN93_06715 PF02620 Large ribosomal RNA subunit accumulation protein YceD AKN93_06720 PF01783 Ribosomal L32p protein family AKN93_06725 PF02504 Fatty acid synthesis protein AKN93_06730 PF00698 Acyl transferase domain AKN93_06740 PF00550 Phosphopantetheine attachment site AKN93_06745 PF00109 Beta-ketoacyl synthase, N-terminal domain AKN93_06745 PF02801 Beta-ketoacyl synthase, C-terminal domain AKN93_06750 PF01063 Amino-transferase class IV AKN93_06755 PF02618 YceG-like family AKN93_06760 PF02223 Thymidylate kinase AKN93_06765 PF09115 DNA polymerase III, delta subunit, C terminal AKN93_06775 PF01026 TatD related DNase AKN93_06780 PF00270 DEAD/DEAH box helicase AKN93_06780 PF11898 Domain of unknown function (DUF3418) AKN93_06780 PF04408 Helicase associated domain (HA2) AKN93_06780 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AKN93_06780 PF00271 Helicase conserved C-terminal domain AKN93_06785 PF12392 Collagenase AKN93_06785 PF01136 Peptidase family U32 AKN93_06790 PF05191 Adenylate kinase, active site lid AKN93_06795 PF00814 Glycoprotease family AKN93_06800 PF04445 Putative SAM-dependent methyltransferase AKN93_06810 PF01131 DNA topoisomerase AKN93_06810 PF01751 Toprim domain AKN93_06810 PF01396 Topoisomerase DNA binding C4 zinc finger AKN93_06810 PF08272 Topoisomerase I zinc-ribbon-like AKN93_06820 PF00849 RNA pseudouridylate synthase AKN93_06825 PF00593 TonB dependent receptor AKN93_06825 PF07715 TonB-dependent Receptor Plug Domain AKN93_06825 PF04886 PT repeat AKN93_06835 PF05171 Haemin-degrading HemS.ChuX domain AKN93_06845 PF02472 Biopolymer transport protein ExbD/TolR AKN93_06850 PF01497 Periplasmic binding protein AKN93_06855 PF01032 FecCD transport family AKN93_06860 PF00005 ABC transporter AKN93_06880 PF14698 Argininosuccinate lyase C-terminal AKN93_06880 PF00206 Lyase AKN93_06885 PF00465 Iron-containing alcohol dehydrogenase AKN93_06890 PF01699 Sodium/calcium exchanger protein AKN93_06895 PF00939 Sodium:sulfate symporter transmembrane region AKN93_06900 PF00270 DEAD/DEAH box helicase AKN93_06900 PF00271 Helicase conserved C-terminal domain AKN93_06900 PF03880 DbpA RNA binding domain AKN93_06920 PF00551 Formyl transferase AKN93_06925 PF00586 AIR synthase related protein, N-terminal domain AKN93_06925 PF02769 AIR synthase related protein, C-terminal domain AKN93_06935 PF03737 Aldolase/RraA AKN93_06940 PF01544 CorA-like Mg2+ transporter protein AKN93_06960 PF00691 OmpA family AKN93_06960 PF05736 OprF membrane domain AKN93_06970 PF13617 YnbE-like lipoprotein AKN93_06985 PF01797 Transposase IS200 like AKN93_06990 PF01385 Probable transposase AKN93_06990 PF07282 Putative transposase DNA-binding domain AKN93_06990 PF12323 Helix-turn-helix domain AKN93_06995 PF00027 Cyclic nucleotide-binding domain AKN93_06995 PF00325 Bacterial regulatory proteins, crp family AKN93_07015 PF13614 AAA domain AKN93_07015 PF13807 G-rich domain on putative tyrosine kinase AKN93_07015 PF02706 Chain length determinant protein AKN93_07035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AKN93_07035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AKN93_07035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AKN93_07040 PF01370 NAD dependent epimerase/dehydratase family AKN93_07055 PF00534 Glycosyl transferases group 1 AKN93_07060 PF13477 Glycosyl transferase 4-like AKN93_07060 PF00534 Glycosyl transferases group 1 AKN93_07065 PF02397 Bacterial sugar transferase AKN93_07075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKN93_07075 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AKN93_07075 PF02142 MGS-like domain AKN93_07080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AKN93_07085 PF02719 Polysaccharide biosynthesis protein AKN93_07100 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AKN93_07100 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AKN93_07105 PF02673 Bacitracin resistance protein BacA AKN93_07110 PF00440 Bacterial regulatory proteins, tetR family AKN93_07110 PF16295 Tetracyclin repressor-like, C-terminal domain AKN93_07120 PF00933 Glycosyl hydrolase family 3 N terminal domain AKN93_07125 PF01048 Phosphorylase superfamily AKN93_07135 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_07145 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AKN93_07150 PF04977 Septum formation initiator AKN93_07155 PF03952 Enolase, N-terminal domain AKN93_07155 PF00113 Enolase, C-terminal TIM barrel domain AKN93_07160 PF00793 DAHP synthetase I family AKN93_07165 PF06418 CTP synthase N-terminus AKN93_07165 PF00117 Glutamine amidotransferase class-I AKN93_07170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_07170 PF00183 Hsp90 protein AKN93_07180 PF13406 Transglycosylase SLT domain AKN93_07185 PF03330 Lytic transglycolase AKN93_07185 PF05036 Sporulation related domain AKN93_07190 PF00768 D-alanyl-D-alanine carboxypeptidase AKN93_07190 PF07943 Penicillin-binding protein 5, C-terminal domain AKN93_07195 PF04359 Protein of unknown function (DUF493) AKN93_07200 PF03099 Biotin/lipoate A/B protein ligase family AKN93_07205 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AKN93_07205 PF04055 Radical SAM superfamily AKN93_07210 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AKN93_07240 PF01925 Sulfite exporter TauE/SafE AKN93_07245 PF00270 DEAD/DEAH box helicase AKN93_07245 PF00570 HRDC domain AKN93_07245 PF16124 RecQ zinc-binding AKN93_07245 PF09382 RQC domain AKN93_07245 PF00271 Helicase conserved C-terminal domain AKN93_07250 PF00893 Small Multidrug Resistance protein AKN93_07255 PF00893 Small Multidrug Resistance protein AKN93_07260 PF01814 Hemerythrin HHE cation binding domain AKN93_07265 PF04055 Radical SAM superfamily AKN93_07270 PF01242 6-pyruvoyl tetrahydropterin synthase AKN93_07275 PF06508 Queuosine biosynthesis protein QueC AKN93_07280 PF00459 Inositol monophosphatase family AKN93_07285 PF05532 CsbD-like AKN93_07290 PF04972 BON domain AKN93_07295 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AKN93_07300 PF01554 MatE AKN93_07305 PF00398 Ribosomal RNA adenine dimethylase AKN93_07310 PF04379 ApaG domain AKN93_07315 PF00149 Calcineurin-like phosphoesterase AKN93_07320 PF00581 Rhodanese-like domain AKN93_07325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_07325 PF03466 LysR substrate binding domain AKN93_07330 PF17284 Spermidine synthase tetramerisation domain AKN93_07340 PF02028 BCCT, betaine/carnitine/choline family transporter AKN93_07350 PF00883 Cytosol aminopeptidase family, catalytic domain AKN93_07350 PF02789 Cytosol aminopeptidase family, N-terminal domain AKN93_07355 PF03739 Lipopolysaccharide export system permease LptF/LptG AKN93_07360 PF03739 Lipopolysaccharide export system permease LptF/LptG AKN93_07365 PF03969 AFG1-like ATPase AKN93_07370 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AKN93_07375 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AKN93_07380 PF04314 Copper chaperone PCu(A)C AKN93_07385 PF00313 'Cold-shock' DNA-binding domain AKN93_07390 PF02617 ATP-dependent Clp protease adaptor protein ClpS AKN93_07395 PF02861 Clp amino terminal domain, pathogenicity island component AKN93_07395 PF00004 ATPase family associated with various cellular activities (AAA) AKN93_07395 PF17871 AAA lid domain AKN93_07395 PF10431 C-terminal, D2-small domain, of ClpB protein AKN93_07395 PF07724 AAA domain (Cdc48 subfamily) AKN93_07400 PF00258 Flavodoxin AKN93_07405 PF00849 RNA pseudouridylate synthase AKN93_07410 PF01575 MaoC like domain AKN93_07415 PF00501 AMP-binding enzyme AKN93_07415 PF13193 AMP-binding enzyme C-terminal domain AKN93_07420 PF00582 Universal stress protein family AKN93_07425 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_07435 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AKN93_07440 PF04977 Septum formation initiator AKN93_07445 PF03952 Enolase, N-terminal domain AKN93_07445 PF00113 Enolase, C-terminal TIM barrel domain AKN93_07450 PF00793 DAHP synthetase I family AKN93_07455 PF00117 Glutamine amidotransferase class-I AKN93_07455 PF06418 CTP synthase N-terminus AKN93_07460 PF00183 Hsp90 protein AKN93_07460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_07475 PF00144 Beta-lactamase AKN93_07480 PF06733 DEAD_2 AKN93_07480 PF13307 Helicase C-terminal domain AKN93_07485 PF02810 SEC-C motif AKN93_07490 PF01180 Dihydroorotate dehydrogenase AKN93_07495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AKN93_07500 PF00873 AcrB/AcrD/AcrF family AKN93_07505 PF00873 AcrB/AcrD/AcrF family AKN93_07510 PF02321 Outer membrane efflux protein AKN93_07515 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AKN93_07530 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AKN93_07535 PF00920 Dehydratase family AKN93_07540 PF01081 KDPG and KHG aldolase AKN93_07550 PF01207 Dihydrouridine synthase (Dus) AKN93_07555 PF01176 Translation initiation factor 1A / IF-1 AKN93_07560 PF04376 Arginine-tRNA-protein transferase, N terminus AKN93_07560 PF04377 Arginine-tRNA-protein transferase, C terminus AKN93_07565 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AKN93_07570 PF01580 FtsK/SpoIIIE family AKN93_07570 PF09397 Ftsk gamma domain AKN93_07570 PF17854 FtsK alpha domain AKN93_07570 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AKN93_07575 PF03548 Outer membrane lipoprotein carrier protein LolA AKN93_07580 PF12002 MgsA AAA+ ATPase C terminal AKN93_07580 PF00004 ATPase family associated with various cellular activities (AAA) AKN93_07580 PF16193 AAA C-terminal domain AKN93_07585 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AKN93_07590 PF02403 Seryl-tRNA synthetase N-terminal domain AKN93_07590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AKN93_07600 PF03734 L,D-transpeptidase catalytic domain AKN93_07605 PF03129 Anticodon binding domain AKN93_07605 PF02824 TGS domain AKN93_07605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AKN93_07605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AKN93_07610 PF05198 Translation initiation factor IF-3, N-terminal domain AKN93_07610 PF00707 Translation initiation factor IF-3, C-terminal domain AKN93_07615 PF01632 Ribosomal protein L35 AKN93_07620 PF00453 Ribosomal protein L20 AKN93_07625 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AKN93_07625 PF01409 tRNA synthetases class II core domain (F) AKN93_07630 PF03483 B3/4 domain AKN93_07630 PF03484 tRNA synthetase B5 domain AKN93_07630 PF03147 Ferredoxin-fold anticodon binding domain AKN93_07630 PF01588 Putative tRNA binding domain AKN93_07630 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AKN93_07635 PF00216 Bacterial DNA-binding protein AKN93_07645 PF02635 DsrE/DsrF-like family AKN93_07650 PF02635 DsrE/DsrF-like family AKN93_07660 PF04358 DsrC like protein AKN93_07665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AKN93_07665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_07670 PF01965 DJ-1/PfpI family AKN93_07680 PF00175 Oxidoreductase NAD-binding domain AKN93_07680 PF00111 2Fe-2S iron-sulfur cluster binding domain AKN93_07680 PF00970 Oxidoreductase FAD-binding domain AKN93_07705 PF03781 Sulfatase-modifying factor enzyme 1 AKN93_07715 PF00005 ABC transporter AKN93_07750 PF04542 Sigma-70 region 2 AKN93_07750 PF04539 Sigma-70 region 3 AKN93_07750 PF04545 Sigma-70, region 4 AKN93_07750 PF00140 Sigma-70 factor, region 1.2 AKN93_07755 PF17871 AAA lid domain AKN93_07755 PF02861 Clp amino terminal domain, pathogenicity island component AKN93_07755 PF10431 C-terminal, D2-small domain, of ClpB protein AKN93_07755 PF07724 AAA domain (Cdc48 subfamily) AKN93_07755 PF00004 ATPase family associated with various cellular activities (AAA) AKN93_07765 PF08443 RimK-like ATP-grasp domain AKN93_07765 PF18030 RimK PreATP-grasp domain AKN93_07780 PF07690 Major Facilitator Superfamily AKN93_07795 PF00579 tRNA synthetases class I (W and Y) AKN93_07800 PF01258 Prokaryotic dksA/traR C4-type zinc finger AKN93_07810 PF04228 Putative neutral zinc metallopeptidase AKN93_07815 PF00664 ABC transporter transmembrane region AKN93_07815 PF00005 ABC transporter AKN93_07820 PF00005 ABC transporter AKN93_07820 PF00664 ABC transporter transmembrane region AKN93_07830 PF00075 RNase H AKN93_07835 PF00929 Exonuclease AKN93_07840 PF04143 Sulphur transport AKN93_07850 PF00753 Metallo-beta-lactamase superfamily AKN93_07860 PF00916 Sulfate permease family AKN93_07860 PF01740 STAS domain AKN93_07890 PF00293 NUDIX domain AKN93_07895 PF00132 Bacterial transferase hexapeptide (six repeats) AKN93_07905 PF02222 ATP-grasp domain AKN93_07915 PF00633 Helix-hairpin-helix motif AKN93_07915 PF10576 Iron-sulfur binding domain of endonuclease III AKN93_07915 PF00730 HhH-GPD superfamily base excision DNA repair protein AKN93_07920 PF01235 Sodium:alanine symporter family AKN93_07925 PF08534 Redoxin AKN93_07940 PF01206 Sulfurtransferase TusA AKN93_07945 PF01513 ATP-NAD kinase AKN93_07950 PF00149 Calcineurin-like phosphoesterase AKN93_07955 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AKN93_07955 PF01694 Rhomboid family AKN93_07970 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AKN93_07970 PF01433 Peptidase family M1 domain AKN93_07970 PF11940 Domain of unknown function (DUF3458) Ig-like fold AKN93_07975 PF00107 Zinc-binding dehydrogenase AKN93_07975 PF08240 Alcohol dehydrogenase GroES-like domain AKN93_07980 PF00756 Putative esterase AKN93_07985 PF01272 Transcription elongation factor, GreA/GreB, C-term AKN93_07985 PF03449 Transcription elongation factor, N-terminal AKN93_07995 PF02678 Pirin AKN93_07995 PF05726 Pirin C-terminal cupin domain AKN93_08000 PF00857 Isochorismatase family AKN93_08010 PF00005 ABC transporter AKN93_08015 PF13472 GDSL-like Lipase/Acylhydrolase family AKN93_08025 PF01979 Amidohydrolase family AKN93_08030 PF00216 Bacterial DNA-binding protein AKN93_08035 PF00005 ABC transporter AKN93_08040 PF00005 ABC transporter AKN93_08040 PF12399 Branched-chain amino acid ATP-binding cassette transporter AKN93_08045 PF02653 Branched-chain amino acid transport system / permease component AKN93_08045 PF11862 Domain of unknown function (DUF3382) AKN93_08050 PF02653 Branched-chain amino acid transport system / permease component AKN93_08055 PF13458 Periplasmic binding protein AKN93_08060 PF00929 Exonuclease AKN93_08065 PF01979 Amidohydrolase family AKN93_08070 PF00764 Arginosuccinate synthase AKN93_08075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AKN93_08090 PF00106 short chain dehydrogenase AKN93_08095 PF13419 Haloacid dehalogenase-like hydrolase AKN93_08110 PF00860 Permease family AKN93_08115 PF00080 Copper/zinc superoxide dismutase (SODC) AKN93_08120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_08125 PF00330 Aconitase family (aconitate hydratase) AKN93_08130 PF00694 Aconitase C-terminal domain AKN93_08135 PF00180 Isocitrate/isopropylmalate dehydrogenase AKN93_08140 PF02774 Semialdehyde dehydrogenase, dimerisation domain AKN93_08140 PF01118 Semialdehyde dehydrogenase, NAD binding domain AKN93_08145 PF01545 Cation efflux family AKN93_08145 PF16916 Dimerisation domain of Zinc Transporter AKN93_08155 PF00924 Mechanosensitive ion channel AKN93_08155 PF05552 Conserved TM helix AKN93_08160 PF00005 ABC transporter AKN93_08165 PF03379 CcmB protein AKN93_08170 PF01578 Cytochrome C assembly protein AKN93_08175 PF04995 Heme exporter protein D (CcmD) AKN93_08180 PF03100 CcmE AKN93_08185 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AKN93_08185 PF01578 Cytochrome C assembly protein AKN93_08190 PF08534 Redoxin AKN93_08195 PF03918 Cytochrome C biogenesis protein AKN93_08205 PF08546 Ketopantoate reductase PanE/ApbA C terminal AKN93_08205 PF02558 Ketopantoate reductase PanE/ApbA AKN93_08210 PF13677 Membrane MotB of proton-channel complex MotA/MotB AKN93_08210 PF00691 OmpA family AKN93_08215 PF01243 Pyridoxamine 5'-phosphate oxidase AKN93_08215 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AKN93_08225 PF05433 Glycine zipper 2TM domain AKN93_08250 PF02310 B12 binding domain AKN93_08250 PF02607 B12 binding domain AKN93_08250 PF02965 Vitamin B12 dependent methionine synthase, activation domain AKN93_08250 PF00809 Pterin binding enzyme AKN93_08250 PF02574 Homocysteine S-methyltransferase AKN93_08265 PF00970 Oxidoreductase FAD-binding domain AKN93_08265 PF00175 Oxidoreductase NAD-binding domain AKN93_08270 PF00675 Insulinase (Peptidase family M16) AKN93_08275 PF01170 Putative RNA methylase family UPF0020 AKN93_08275 PF02926 THUMP domain AKN93_08275 PF10672 S-adenosylmethionine-dependent methyltransferase AKN93_08280 PF01479 S4 domain AKN93_08280 PF00849 RNA pseudouridylate synthase AKN93_08285 PF01011 PQQ enzyme repeat AKN93_08290 PF11791 Aconitate B N-terminal domain AKN93_08290 PF06434 Aconitate hydratase 2 N-terminus AKN93_08290 PF00330 Aconitase family (aconitate hydratase) AKN93_08295 PF01648 4'-phosphopantetheinyl transferase superfamily AKN93_08295 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AKN93_08300 PF01207 Dihydrouridine synthase (Dus) AKN93_08330 PF17946 RecC C-terminal domain AKN93_08335 PF12705 PD-(D/E)XK nuclease superfamily AKN93_08335 PF00580 UvrD/REP helicase N-terminal domain AKN93_08335 PF13361 UvrD-like helicase C-terminal domain AKN93_08340 PF13538 UvrD-like helicase C-terminal domain AKN93_08345 PF01906 Putative heavy-metal-binding AKN93_08355 PF00923 Transaldolase/Fructose-6-phosphate aldolase AKN93_08365 PF03937 Flavinator of succinate dehydrogenase AKN93_08375 PF02910 Fumarate reductase flavoprotein C-term AKN93_08375 PF00890 FAD binding domain AKN93_08380 PF00378 Enoyl-CoA hydratase/isomerase AKN93_08395 PF02954 Bacterial regulatory protein, Fis family AKN93_08395 PF00158 Sigma-54 interaction domain AKN93_08395 PF00072 Response regulator receiver domain AKN93_08400 PF00497 Bacterial extracellular solute-binding proteins, family 3 AKN93_08400 PF00512 His Kinase A (phospho-acceptor) domain AKN93_08400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_08405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AKN93_08405 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_08410 PF08281 Sigma-70, region 4 AKN93_08410 PF04542 Sigma-70 region 2 AKN93_08415 PF03872 Anti sigma-E protein RseA, N-terminal domain AKN93_08415 PF03873 Anti sigma-E protein RseA, C-terminal domain AKN93_08420 PF03888 MucB/RseB N-terminal domain AKN93_08420 PF17188 MucB/RseB C-terminal domain AKN93_08430 PF13180 PDZ domain AKN93_08435 PF00679 Elongation factor G C-terminus AKN93_08435 PF00009 Elongation factor Tu GTP binding domain AKN93_08435 PF03144 Elongation factor Tu domain 2 AKN93_08435 PF06421 GTP-binding protein LepA C-terminus AKN93_08440 PF10502 Signal peptidase, peptidase S26 AKN93_08445 PF00035 Double-stranded RNA binding motif AKN93_08445 PF14622 Ribonuclease-III-like AKN93_08450 PF01926 50S ribosome-binding GTPase AKN93_08450 PF07650 KH domain AKN93_08455 PF11967 Recombination protein O N terminal AKN93_08455 PF02565 Recombination protein O C terminal AKN93_08460 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AKN93_08465 PF00440 Bacterial regulatory proteins, tetR family AKN93_08480 PF00005 ABC transporter AKN93_08485 PF01061 ABC-2 type transporter AKN93_08490 PF00877 NlpC/P60 family AKN93_08495 PF00877 NlpC/P60 family AKN93_08500 PF00291 Pyridoxal-phosphate dependent enzyme AKN93_08510 PF00512 His Kinase A (phospho-acceptor) domain AKN93_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_08510 PF00672 HAMP domain AKN93_08520 PF00486 Transcriptional regulatory protein, C terminal AKN93_08520 PF00072 Response regulator receiver domain AKN93_08525 PF03795 YCII-related domain AKN93_08530 PF04279 Intracellular septation protein A AKN93_08535 PF02811 PHP domain AKN93_08540 PF01300 Telomere recombination AKN93_08545 PF02616 Segregation and condensation protein ScpA AKN93_08550 PF04079 Segregation and condensation complex subunit ScpB AKN93_08555 PF00326 Prolyl oligopeptidase family AKN93_08560 PF04055 Radical SAM superfamily AKN93_08560 PF13186 Iron-sulfur cluster-binding domain AKN93_08565 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AKN93_08570 PF03070 TENA/THI-4/PQQC family AKN93_08575 PF12706 Beta-lactamase superfamily domain AKN93_08580 PF00171 Aldehyde dehydrogenase family AKN93_08595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN93_08600 PF01011 PQQ enzyme repeat AKN93_08600 PF13360 PQQ-like domain AKN93_08610 PF00196 Bacterial regulatory proteins, luxR family AKN93_08610 PF00072 Response regulator receiver domain AKN93_08620 PF00072 Response regulator receiver domain AKN93_08620 PF00196 Bacterial regulatory proteins, luxR family AKN93_08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_08625 PF00512 His Kinase A (phospho-acceptor) domain AKN93_08625 PF09456 RcsC Alpha-Beta-Loop (ABL) AKN93_08625 PF00072 Response regulator receiver domain AKN93_08640 PF01966 HD domain AKN93_08645 PF03747 ADP-ribosylglycohydrolase AKN93_08650 PF05099 Tellurite resistance protein TerB AKN93_08650 PF00226 DnaJ domain AKN93_08660 PF13476 AAA domain AKN93_08665 PF12320 Type 5 capsule protein repressor C-terminal domain AKN93_08665 PF00149 Calcineurin-like phosphoesterase AKN93_08675 PF01594 AI-2E family transporter AKN93_08685 PF02798 Glutathione S-transferase, N-terminal domain AKN93_08685 PF00043 Glutathione S-transferase, C-terminal domain AKN93_08690 PF00364 Biotin-requiring enzyme AKN93_08690 PF00561 alpha/beta hydrolase fold AKN93_08705 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AKN93_08705 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AKN93_08715 PF00717 Peptidase S24-like AKN93_08715 PF01726 LexA DNA binding domain AKN93_08720 PF03846 Cell division inhibitor SulA AKN93_08725 PF00749 tRNA synthetases class I (E and Q), catalytic domain AKN93_08730 PF07690 Major Facilitator Superfamily AKN93_08735 PF01551 Peptidase family M23 AKN93_08735 PF01476 LysM domain AKN93_08750 PF01975 Survival protein SurE AKN93_08755 PF01142 tRNA pseudouridine synthase D (TruD) AKN93_08760 PF02542 YgbB family AKN93_08765 PF00375 Sodium:dicarboxylate symporter family AKN93_08770 PF04357 TamB, inner membrane protein subunit of TAM complex AKN93_08775 PF17243 POTRA domain TamA domain 1 AKN93_08775 PF07244 Surface antigen variable number repeat AKN93_08775 PF01103 Surface antigen AKN93_08780 PF03372 Endonuclease/Exonuclease/phosphatase family AKN93_08785 PF01062 Bestrophin, RFP-TM, chloride channel AKN93_08790 PF01624 MutS domain I AKN93_08790 PF00488 MutS domain V AKN93_08790 PF05190 MutS family domain IV AKN93_08790 PF05188 MutS domain II AKN93_08790 PF05192 MutS domain III AKN93_08795 PF00037 4Fe-4S binding domain AKN93_08795 PF11953 Domain of unknown function (DUF3470) AKN93_08800 PF03150 Di-haem cytochrome c peroxidase AKN93_08810 PF01471 Putative peptidoglycan binding domain AKN93_08810 PF01520 N-acetylmuramoyl-L-alanine amidase AKN93_08830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AKN93_08835 PF03692 Putative zinc- or iron-chelating domain AKN93_08840 PF11734 TilS substrate C-terminal domain AKN93_08840 PF09179 TilS substrate binding domain AKN93_08840 PF01171 PP-loop family AKN93_08845 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AKN93_08850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AKN93_08850 PF14579 Helix-hairpin-helix motif AKN93_08850 PF07733 Bacterial DNA polymerase III alpha NTPase domain AKN93_08850 PF01336 OB-fold nucleic acid binding domain AKN93_08850 PF02811 PHP domain AKN93_08860 PF07977 FabA-like domain AKN93_08865 PF00109 Beta-ketoacyl synthase, N-terminal domain AKN93_08865 PF02801 Beta-ketoacyl synthase, C-terminal domain AKN93_08885 PF00875 DNA photolyase AKN93_08885 PF03441 FAD binding domain of DNA photolyase AKN93_08890 PF13180 PDZ domain AKN93_08895 PF01784 NIF3 (NGG1p interacting factor 3) AKN93_08905 PF06832 Penicillin-Binding Protein C-terminus Family AKN93_08905 PF00912 Transglycosylase AKN93_08905 PF00905 Penicillin binding protein transpeptidase domain AKN93_08910 PF03883 Peroxide stress protein YaaA AKN93_08915 PF00155 Aminotransferase class I and II AKN93_08920 PF00815 Histidinol dehydrogenase AKN93_08925 PF01634 ATP phosphoribosyltransferase AKN93_08930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AKN93_08935 PF01722 BolA-like protein AKN93_08945 PF05494 MlaC protein AKN93_08955 PF02405 Permease MlaE AKN93_08960 PF00005 ABC transporter AKN93_08965 PF00571 CBS domain AKN93_08965 PF01380 SIS domain AKN93_08980 PF03968 OstA-like protein AKN93_08985 PF00005 ABC transporter AKN93_08985 PF12399 Branched-chain amino acid ATP-binding cassette transporter AKN93_08990 PF01844 HNH endonuclease AKN93_09000 PF00664 ABC transporter transmembrane region AKN93_09000 PF00005 ABC transporter AKN93_09025 PF01925 Sulfite exporter TauE/SafE AKN93_09030 PF00293 NUDIX domain AKN93_09030 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AKN93_09030 PF09297 NADH pyrophosphatase zinc ribbon domain AKN93_09040 PF00378 Enoyl-CoA hydratase/isomerase AKN93_09045 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AKN93_09055 PF00034 Cytochrome c AKN93_09055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN93_09060 PF01266 FAD dependent oxidoreductase AKN93_09060 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AKN93_09065 PF01253 Translation initiation factor SUI1 AKN93_09070 PF00474 Sodium:solute symporter family AKN93_09080 PF01169 Uncharacterized protein family UPF0016 AKN93_09085 PF07879 PHB/PHA accumulation regulator DNA-binding domain AKN93_09085 PF05233 PHB accumulation regulatory domain AKN93_09090 PF12323 Helix-turn-helix domain AKN93_09090 PF07282 Putative transposase DNA-binding domain AKN93_09090 PF01385 Probable transposase AKN93_09105 PF13649 Methyltransferase domain AKN93_09110 PF08003 Protein of unknown function (DUF1698) AKN93_09130 PF00857 Isochorismatase family AKN93_09135 PF05726 Pirin C-terminal cupin domain AKN93_09135 PF02678 Pirin AKN93_09160 PF00893 Small Multidrug Resistance protein AKN93_09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_09165 PF03466 LysR substrate binding domain AKN93_09185 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AKN93_09185 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AKN93_09190 PF00753 Metallo-beta-lactamase superfamily AKN93_09195 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AKN93_09195 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AKN93_09195 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AKN93_09195 PF01835 MG2 domain AKN93_09195 PF07678 A-macroglobulin TED domain AKN93_09195 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AKN93_09195 PF07703 Alpha-2-macroglobulin bait region domain AKN93_09195 PF00207 Alpha-2-macroglobulin family AKN93_09195 PF17962 Bacterial macroglobulin domain 6 AKN93_09210 PF05872 Bacterial protein of unknown function (DUF853) AKN93_09215 PF00551 Formyl transferase AKN93_09215 PF01842 ACT domain AKN93_09220 PF04333 MlaA lipoprotein AKN93_09225 PF09190 DALR domain AKN93_09225 PF01406 tRNA synthetases class I (C) catalytic domain AKN93_09230 PF00749 tRNA synthetases class I (E and Q), catalytic domain AKN93_09230 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AKN93_09235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AKN93_09240 PF00149 Calcineurin-like phosphoesterase AKN93_09245 PF02667 Short chain fatty acid transporter AKN93_09250 PF12826 Helix-hairpin-helix motif AKN93_09250 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AKN93_09250 PF03120 NAD-dependent DNA ligase OB-fold domain AKN93_09250 PF00533 BRCA1 C Terminus (BRCT) domain AKN93_09250 PF01653 NAD-dependent DNA ligase adenylation domain AKN93_09255 PF04354 ZipA, C-terminal FtsZ-binding domain AKN93_09260 PF02780 Transketolase, C-terminal domain AKN93_09260 PF02779 Transketolase, pyrimidine binding domain AKN93_09260 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AKN93_09265 PF08274 PhnA Zinc-Ribbon AKN93_09265 PF03831 PhnA domain AKN93_09270 PF00575 S1 RNA binding domain AKN93_09275 PF02224 Cytidylate kinase AKN93_09280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AKN93_09285 PF00155 Aminotransferase class I and II AKN93_09290 PF01817 Chorismate mutase type II AKN93_09290 PF00800 Prephenate dehydratase AKN93_09290 PF01842 ACT domain AKN93_09295 PF00266 Aminotransferase class-V AKN93_09300 PF03989 DNA gyrase C-terminal domain, beta-propeller AKN93_09300 PF00521 DNA gyrase/topoisomerase IV, subunit A AKN93_09305 PF01008 Initiation factor 2 subunit family AKN93_09310 PF00005 ABC transporter AKN93_09310 PF00664 ABC transporter transmembrane region AKN93_09315 PF00308 Bacterial dnaA protein AKN93_09325 PF01066 CDP-alcohol phosphatidyltransferase AKN93_09330 PF01722 BolA-like protein AKN93_09335 PF03573 outer membrane porin, OprD family AKN93_09360 PF02472 Biopolymer transport protein ExbD/TolR AKN93_09365 PF01618 MotA/TolQ/ExbB proton channel family AKN93_09370 PF01618 MotA/TolQ/ExbB proton channel family AKN93_09380 PF13230 Glutamine amidotransferases class-II AKN93_09390 PF11798 IMS family HHH motif AKN93_09390 PF11799 impB/mucB/samB family C-terminal domain AKN93_09390 PF00817 impB/mucB/samB family AKN93_09415 PF00589 Phage integrase family AKN93_09415 PF14659 Phage integrase, N-terminal SAM-like domain AKN93_09430 PF12161 HsdM N-terminal domain AKN93_09430 PF02384 N-6 DNA Methylase AKN93_09475 PF02899 Phage integrase, N-terminal SAM-like domain AKN93_09475 PF00589 Phage integrase family AKN93_09510 PF01925 Sulfite exporter TauE/SafE AKN93_09515 PF01613 Flavin reductase like domain AKN93_09520 PF08267 Cobalamin-independent synthase, N-terminal domain AKN93_09520 PF01717 Cobalamin-independent synthase, Catalytic domain AKN93_09530 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_09535 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_09540 PF12857 TOBE-like domain AKN93_09540 PF00005 ABC transporter AKN93_09545 PF02887 Pyruvate kinase, alpha/beta domain AKN93_09545 PF00224 Pyruvate kinase, barrel domain AKN93_09550 PF00462 Glutaredoxin AKN93_09555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AKN93_09555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AKN93_09560 PF08402 TOBE domain AKN93_09560 PF00005 ABC transporter AKN93_09580 PF01925 Sulfite exporter TauE/SafE AKN93_09585 PF01613 Flavin reductase like domain AKN93_09590 PF08267 Cobalamin-independent synthase, N-terminal domain AKN93_09590 PF01717 Cobalamin-independent synthase, Catalytic domain AKN93_09600 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_09605 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_09610 PF12857 TOBE-like domain AKN93_09610 PF00005 ABC transporter AKN93_09615 PF02887 Pyruvate kinase, alpha/beta domain AKN93_09615 PF00224 Pyruvate kinase, barrel domain AKN93_09620 PF00462 Glutaredoxin AKN93_09625 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AKN93_09625 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AKN93_09630 PF00005 ABC transporter AKN93_09630 PF08402 TOBE domain AKN93_09635 PF00529 HlyD membrane-fusion protein of T1SS AKN93_09635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AKN93_09640 PF00873 AcrB/AcrD/AcrF family AKN93_09645 PF02321 Outer membrane efflux protein AKN93_09650 PF00691 OmpA family AKN93_09660 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AKN93_09660 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AKN93_09670 PF18337 RapA N-terminal Tudor like domain AKN93_09670 PF18339 RapA N-terminal Tudor like domain 1 AKN93_09670 PF00176 SNF2 family N-terminal domain AKN93_09670 PF00271 Helicase conserved C-terminal domain AKN93_09670 PF12137 RNA polymerase recycling family C-terminal AKN93_09675 PF01980 tRNA-methyltransferase O AKN93_09675 PF18389 TrmO C-terminal domain AKN93_09680 PF00483 Nucleotidyl transferase AKN93_09685 PF00270 DEAD/DEAH box helicase AKN93_09685 PF00271 Helicase conserved C-terminal domain AKN93_09700 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AKN93_09705 PF01899 Na+/H+ ion antiporter subunit AKN93_09710 PF00361 Proton-conducting membrane transporter AKN93_09715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AKN93_09720 PF13244 Domain of unknown function (DUF4040) AKN93_09720 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AKN93_09720 PF00361 Proton-conducting membrane transporter AKN93_09720 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AKN93_09725 PF08240 Alcohol dehydrogenase GroES-like domain AKN93_09725 PF00107 Zinc-binding dehydrogenase AKN93_09740 PF02151 UvrB/uvrC motif AKN93_09740 PF00271 Helicase conserved C-terminal domain AKN93_09740 PF12344 Ultra-violet resistance protein B AKN93_09740 PF17757 UvrB interaction domain AKN93_09740 PF04851 Type III restriction enzyme, res subunit AKN93_09745 PF00155 Aminotransferase class I and II AKN93_09750 PF00005 ABC transporter AKN93_09755 PF02687 FtsX-like permease family AKN93_09755 PF12704 MacB-like periplasmic core domain AKN93_09765 PF17783 CvfB-like winged helix domain AKN93_09765 PF13509 S1 domain AKN93_09770 PF01351 Ribonuclease HII AKN93_09775 PF02684 Lipid-A-disaccharide synthetase AKN93_09780 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AKN93_09780 PF00132 Bacterial transferase hexapeptide (six repeats) AKN93_09785 PF07977 FabA-like domain AKN93_09790 PF00132 Bacterial transferase hexapeptide (six repeats) AKN93_09790 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AKN93_09795 PF03938 Outer membrane protein (OmpH-like) AKN93_09800 PF07244 Surface antigen variable number repeat AKN93_09800 PF01103 Surface antigen AKN93_09805 PF17820 PDZ domain AKN93_09805 PF02163 Peptidase family M50 AKN93_09805 PF13180 PDZ domain AKN93_09810 PF13288 DXP reductoisomerase C-terminal domain AKN93_09810 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AKN93_09810 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AKN93_09820 PF01255 Putative undecaprenyl diphosphate synthase AKN93_09825 PF01765 Ribosome recycling factor AKN93_09830 PF00696 Amino acid kinase family AKN93_09835 PF00889 Elongation factor TS AKN93_09840 PF00318 Ribosomal protein S2 AKN93_09845 PF00557 Metallopeptidase family M24 AKN93_09850 PF01909 Nucleotidyltransferase domain AKN93_09850 PF01966 HD domain AKN93_09850 PF08335 GlnD PII-uridylyltransferase AKN93_09850 PF01842 ACT domain AKN93_09855 PF03960 ArsC family AKN93_09860 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AKN93_09860 PF14602 Hexapeptide repeat of succinyl-transferase AKN93_09865 PF00266 Aminotransferase class-V AKN93_09870 PF02657 Fe-S metabolism associated domain AKN93_09890 PF00291 Pyridoxal-phosphate dependent enzyme AKN93_09890 PF14821 Threonine synthase N terminus AKN93_09895 PF03447 Homoserine dehydrogenase, NAD binding domain AKN93_09895 PF01842 ACT domain AKN93_09895 PF00742 Homoserine dehydrogenase AKN93_09900 PF00589 Phage integrase family AKN93_09900 PF02899 Phage integrase, N-terminal SAM-like domain AKN93_09905 PF07690 Major Facilitator Superfamily AKN93_09910 PF09411 Lipid A 3-O-deacylase (PagL) AKN93_09915 PF01177 Asp/Glu/Hydantoin racemase AKN93_09920 PF00899 ThiF family AKN93_09925 PF17827 PrmC N-terminal domain AKN93_09925 PF05175 Methyltransferase small domain AKN93_09930 PF03462 PCRF domain AKN93_09930 PF00472 RF-1 domain AKN93_09935 PF01488 Shikimate / quinate 5-dehydrogenase AKN93_09935 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AKN93_09935 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AKN93_09945 PF03550 Outer membrane lipoprotein LolB AKN93_09950 PF00288 GHMP kinases N terminal domain AKN93_09950 PF08544 GHMP kinases C terminal AKN93_09960 PF14572 Phosphoribosyl synthetase-associated domain AKN93_09960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AKN93_09965 PF01386 Ribosomal L25p family AKN93_09965 PF14693 Ribosomal protein TL5, C-terminal domain AKN93_09970 PF01195 Peptidyl-tRNA hydrolase AKN93_09975 PF06071 Protein of unknown function (DUF933) AKN93_09975 PF01926 50S ribosome-binding GTPase AKN93_09980 PF00107 Zinc-binding dehydrogenase AKN93_09980 PF08240 Alcohol dehydrogenase GroES-like domain AKN93_09985 PF08496 Peptidase family S49 N-terminal AKN93_09985 PF01343 Peptidase family S49 AKN93_10005 PF14437 MafB19-like deaminase AKN93_10010 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AKN93_10010 PF01565 FAD binding domain AKN93_10015 PF01451 Low molecular weight phosphotyrosine protein phosphatase AKN93_10020 PF02348 Cytidylyltransferase AKN93_10025 PF03966 Trm112p-like protein AKN93_10030 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AKN93_10035 PF00753 Metallo-beta-lactamase superfamily AKN93_10035 PF13567 Domain of unknown function (DUF4131) AKN93_10035 PF03772 Competence protein AKN93_10045 PF00291 Pyridoxal-phosphate dependent enzyme AKN93_10050 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AKN93_10055 PF00682 HMGL-like AKN93_10055 PF02436 Conserved carboxylase domain AKN93_10055 PF00364 Biotin-requiring enzyme AKN93_10060 PF04277 Oxaloacetate decarboxylase, gamma chain AKN93_10065 PF03448 MgtE intracellular N domain AKN93_10065 PF00571 CBS domain AKN93_10065 PF01769 Divalent cation transporter AKN93_10085 PF02599 Global regulator protein family AKN93_10090 PF00696 Amino acid kinase family AKN93_10090 PF01842 ACT domain AKN93_10090 PF13840 ACT domain AKN93_10095 PF02272 DHHA1 domain AKN93_10095 PF01411 tRNA synthetases class II (A) AKN93_10095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AKN93_10105 PF00202 Aminotransferase class-III AKN93_10115 PF01171 PP-loop family AKN93_10120 PF07690 Major Facilitator Superfamily AKN93_10125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AKN93_10130 PF00206 Lyase AKN93_10130 PF10415 Fumarase C C-terminus AKN93_10135 PF01925 Sulfite exporter TauE/SafE AKN93_10140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKN93_10140 PF00512 His Kinase A (phospho-acceptor) domain AKN93_10140 PF09456 RcsC Alpha-Beta-Loop (ABL) AKN93_10140 PF00072 Response regulator receiver domain AKN93_10150 PF07549 SecD/SecF GG Motif AKN93_10150 PF02355 Protein export membrane protein AKN93_10155 PF13721 SecD export protein N-terminal TM region AKN93_10155 PF07549 SecD/SecF GG Motif AKN93_10155 PF02355 Protein export membrane protein AKN93_10160 PF02699 Preprotein translocase subunit AKN93_10165 PF01702 Queuine tRNA-ribosyltransferase AKN93_10170 PF02547 Queuosine biosynthesis protein AKN93_10180 PF07681 DoxX AKN93_10185 PF05175 Methyltransferase small domain AKN93_10190 PF01804 Penicillin amidase AKN93_10195 PF13488 Glycine zipper AKN93_10195 PF00691 OmpA family AKN93_10200 PF01541 GIY-YIG catalytic domain AKN93_10210 PF02230 Phospholipase/Carboxylesterase AKN93_10215 PF00270 DEAD/DEAH box helicase AKN93_10215 PF00271 Helicase conserved C-terminal domain AKN93_10220 PF01259 SAICAR synthetase AKN93_10230 PF00701 Dihydrodipicolinate synthetase family AKN93_10240 PF00578 AhpC/TSA family AKN93_10245 PF01206 Sulfurtransferase TusA AKN93_10250 PF13181 Tetratricopeptide repeat AKN93_10250 PF01435 Peptidase family M48 AKN93_10255 PF03601 Conserved hypothetical protein 698 AKN93_10260 PF07690 Major Facilitator Superfamily AKN93_10265 PF04231 Endonuclease I AKN93_10275 PF03006 Haemolysin-III related AKN93_10285 PF13091 PLD-like domain AKN93_10285 PF13396 Phospholipase_D-nuclease N-terminal AKN93_10290 PF02627 Carboxymuconolactone decarboxylase family AKN93_10295 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_10300 PF00583 Acetyltransferase (GNAT) family AKN93_10310 PF17113 Regulatory signalling modulator protein AmpE AKN93_10310 PF03186 CobD/Cbib protein AKN93_10315 PF00155 Aminotransferase class I and II AKN93_10325 PF01497 Periplasmic binding protein AKN93_10330 PF01032 FecCD transport family AKN93_10335 PF00005 ABC transporter AKN93_10340 PF12557 Cob(I)alamin adenosyltransferase N terminal AKN93_10340 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AKN93_10345 PF07685 CobB/CobQ-like glutamine amidotransferase domain AKN93_10345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AKN93_10350 PF00881 Nitroreductase family AKN93_10360 PF02567 Phenazine biosynthesis-like protein AKN93_10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKN93_10370 PF03466 LysR substrate binding domain AKN93_10380 PF02653 Branched-chain amino acid transport system / permease component AKN93_10390 PF00005 ABC transporter AKN93_10395 PF12399 Branched-chain amino acid ATP-binding cassette transporter AKN93_10395 PF00005 ABC transporter AKN93_10400 PF03573 outer membrane porin, OprD family AKN93_10410 PF13193 AMP-binding enzyme C-terminal domain AKN93_10410 PF00501 AMP-binding enzyme AKN93_10415 PF02770 Acyl-CoA dehydrogenase, middle domain AKN93_10415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKN93_10415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKN93_10420 PF01039 Carboxyl transferase domain AKN93_10425 PF00378 Enoyl-CoA hydratase/isomerase AKN93_10425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AKN93_10425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AKN93_10430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKN93_10430 PF00364 Biotin-requiring enzyme AKN93_10430 PF00289 Biotin carboxylase, N-terminal domain AKN93_10430 PF02785 Biotin carboxylase C-terminal domain AKN93_10435 PF00682 HMGL-like AKN93_10440 PF01144 Coenzyme A transferase AKN93_10445 PF01144 Coenzyme A transferase AKN93_10450 PF13411 MerR HTH family regulatory protein AKN93_10455 PF02627 Carboxymuconolactone decarboxylase family AKN93_10470 PF05525 Branched-chain amino acid transport protein AKN93_10475 PF00549 CoA-ligase AKN93_10475 PF02629 CoA binding domain AKN93_10480 PF00549 CoA-ligase AKN93_10480 PF08442 ATP-grasp domain AKN93_10485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AKN93_10485 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_10490 PF02817 e3 binding domain AKN93_10490 PF00364 Biotin-requiring enzyme AKN93_10490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AKN93_10495 PF16078 2-oxoglutarate dehydrogenase N-terminus AKN93_10495 PF00676 Dehydrogenase E1 component AKN93_10495 PF16870 2-oxoglutarate dehydrogenase C-terminal AKN93_10495 PF02779 Transketolase, pyrimidine binding domain AKN93_10500 PF13085 2Fe-2S iron-sulfur cluster binding domain AKN93_10505 PF00890 FAD binding domain AKN93_10505 PF02910 Fumarate reductase flavoprotein C-term AKN93_10515 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AKN93_10520 PF00285 Citrate synthase, C-terminal domain AKN93_10525 PF01852 START domain AKN93_10530 PF03692 Putative zinc- or iron-chelating domain AKN93_10535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AKN93_10535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AKN93_10545 PF00115 Cytochrome C and Quinol oxidase polypeptide I AKN93_10560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKN93_10560 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AKN93_10565 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AKN93_10565 PF12801 4Fe-4S binding domain AKN93_10565 PF13746 4Fe-4S dicluster domain AKN93_10575 PF00403 Heavy-metal-associated domain AKN93_10595 PF01464 Transglycosylase SLT domain AKN93_10595 PF14718 Soluble lytic murein transglycosylase L domain AKN93_10600 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AKN93_10605 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_10610 PF00005 ABC transporter AKN93_10615 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AKN93_10625 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKN93_10635 PF03358 NADPH-dependent FMN reductase AKN93_10640 PF03960 ArsC family AKN93_10645 PF08534 Redoxin AKN93_10665 PF00216 Bacterial DNA-binding protein AKN93_10670 PF01521 Iron-sulphur cluster biosynthesis AKN93_10670 PF01106 NifU-like domain AKN93_10675 PF13419 Haloacid dehalogenase-like hydrolase AKN93_10680 PF03079 ARD/ARD' family AKN93_10685 PF00596 Class II Aldolase and Adducin N-terminal domain AKN93_10695 PF01264 Chorismate synthase AKN93_10700 PF01713 Smr domain AKN93_10705 PF00180 Isocitrate/isopropylmalate dehydrogenase AKN93_10710 PF00293 NUDIX domain AKN93_10715 PF01551 Peptidase family M23 AKN93_10715 PF10145 Phage-related minor tail protein AKN93_10715 PF01464 Transglycosylase SLT domain AKN93_10730 PF00271 Helicase conserved C-terminal domain AKN93_10730 PF00270 DEAD/DEAH box helicase AKN93_10730 PF17764 3′ DNA-binding domain (3′BD) AKN93_10730 PF18074 Primosomal protein N C-terminal domain AKN93_10730 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AKN93_10735 PF00750 tRNA synthetases class I (R) AKN93_10735 PF03485 Arginyl tRNA synthetase N terminal domain AKN93_10735 PF05746 DALR anticodon binding domain AKN93_10750 PF00593 TonB dependent receptor AKN93_10750 PF07715 TonB-dependent Receptor Plug Domain AKN93_10760 PF02654 Cobalamin-5-phosphate synthase AKN93_10770 PF02277 Phosphoribosyltransferase AKN93_10775 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AKN93_10780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AKN93_10780 PF01872 RibD C-terminal domain AKN93_10785 PF03477 ATP cone domain AKN93_10795 PF04055 Radical SAM superfamily AKN93_10795 PF01938 TRAM domain AKN93_10795 PF00919 Uncharacterized protein family UPF0004 AKN93_10815 PF00440 Bacterial regulatory proteins, tetR family AKN93_10815 PF17932 Tetracyclin repressor-like, C-terminal domain AKN93_10840 PF00108 Thiolase, N-terminal domain AKN93_10840 PF02803 Thiolase, C-terminal domain AKN93_10845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AKN93_10845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AKN93_10845 PF00378 Enoyl-CoA hydratase/isomerase AKN93_10850 PF00582 Universal stress protein family AKN93_10860 PF02028 BCCT, betaine/carnitine/choline family transporter AKN93_10865 PF00005 ABC transporter AKN93_10865 PF12848 ABC transporter AKN93_10865 PF16326 ABC transporter C-terminal domain AKN93_10880 PF00425 chorismate binding enzyme AKN93_10880 PF04715 Anthranilate synthase component I, N terminal region AKN93_10885 PF03969 AFG1-like ATPase AKN93_10890 PF16123 Hydroxyacylglutathione hydrolase C-terminus AKN93_10890 PF00753 Metallo-beta-lactamase superfamily AKN93_10895 PF01476 LysM domain AKN93_10895 PF01464 Transglycosylase SLT domain AKN93_10900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AKN93_10905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AKN93_10910 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_10915 PF12911 N-terminal TM domain of oligopeptide transport permease C AKN93_10915 PF00528 Binding-protein-dependent transport system inner membrane component AKN93_10920 PF00005 ABC transporter AKN93_10920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AKN93_10935 PF00199 Catalase AKN93_10935 PF06628 Catalase-related immune-responsive AKN93_10935 PF18011 C-terminal domain found in long catalases AKN93_10940 PF00793 DAHP synthetase I family AKN93_10955 PF04356 Protein of unknown function (DUF489) AKN93_10960 PF00892 EamA-like transporter family AKN93_10965 PF00206 Lyase AKN93_10965 PF08328 Adenylosuccinate lyase C-terminal AKN93_10970 PF08007 Cupin superfamily protein AKN93_10975 PF13673 Acetyltransferase (GNAT) domain AKN93_10990 PF00463 Isocitrate lyase family AKN93_10995 PF00899 ThiF family AKN93_11005 PF13847 Methyltransferase domain AKN93_11015 PF02769 AIR synthase related protein, C-terminal domain AKN93_11015 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AKN93_11015 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AKN93_11020 PF01464 Transglycosylase SLT domain AKN93_11020 PF00497 Bacterial extracellular solute-binding proteins, family 3 AKN93_11030 PF00391 PEP-utilising enzyme, mobile domain AKN93_11030 PF02896 PEP-utilising enzyme, TIM barrel domain AKN93_11030 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AKN93_11035 PF03618 Kinase/pyrophosphorylase AKN93_11040 PF03458 UPF0126 domain AKN93_11045 PF01494 FAD binding domain AKN93_11060 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit