locus-tag class description EW093_00015 PF01230 HIT domain EW093_00020 PF14492 Elongation Factor G, domain II EW093_00020 PF03144 Elongation factor Tu domain 2 EW093_00020 PF00679 Elongation factor G C-terminus EW093_00020 PF00009 Elongation factor Tu GTP binding domain EW093_00020 PF03764 Elongation factor G, domain IV EW093_00025 PF01451 Low molecular weight phosphotyrosine protein phosphatase EW093_00030 PF06865 Pyrimidine/purine nucleoside phosphorylase EW093_00035 PF01863 Protein of unknown function DUF45 EW093_00045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EW093_00045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EW093_00045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EW093_00045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EW093_00050 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EW093_00050 PF06165 Glycosyltransferase family 36 EW093_00060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EW093_00060 PF01411 tRNA synthetases class II (A) EW093_00065 PF01706 FliG C-terminal domain EW093_00065 PF14841 FliG middle domain EW093_00065 PF14842 FliG N-terminal domain EW093_00085 PF07194 P2 response regulator binding domain EW093_00085 PF02895 Signal transducing histidine kinase, homodimeric domain EW093_00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_00085 PF01584 CheW-like domain EW093_00085 PF01627 Hpt domain EW093_00095 PF00072 Response regulator receiver domain EW093_00100 PF00270 DEAD/DEAH box helicase EW093_00100 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EW093_00100 PF00271 Helicase conserved C-terminal domain EW093_00100 PF11898 Domain of unknown function (DUF3418) EW093_00100 PF04408 Helicase associated domain (HA2) EW093_00110 PF01348 Type II intron maturase EW093_00110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EW093_00120 PF00557 Metallopeptidase family M24 EW093_00130 PF01554 MatE EW093_00145 PF00255 Glutathione peroxidase EW093_00150 PF01047 MarR family EW093_00160 PF00005 ABC transporter EW093_00170 PF04060 Putative Fe-S cluster EW093_00180 PF02508 Rnf-Nqr subunit, membrane protein EW093_00185 PF02508 Rnf-Nqr subunit, membrane protein EW093_00195 PF03116 NQR2, RnfD, RnfE family EW093_00205 PF01654 Cytochrome bd terminal oxidase subunit I EW093_00215 PF01435 Peptidase family M48 EW093_00220 PF00211 Adenylate and Guanylate cyclase catalytic domain EW093_00260 PF00005 ABC transporter EW093_00260 PF12848 ABC transporter EW093_00280 PF13335 Magnesium chelatase, subunit ChlI C-terminal EW093_00280 PF01078 Magnesium chelatase, subunit ChlI EW093_00290 PF01042 Endoribonuclease L-PSP EW093_00325 PF00158 Sigma-54 interaction domain EW093_00325 PF02954 Bacterial regulatory protein, Fis family EW093_00325 PF00072 Response regulator receiver domain EW093_00330 PF00575 S1 RNA binding domain EW093_00335 PF01479 S4 domain EW093_00335 PF00849 RNA pseudouridylate synthase EW093_00340 PF04079 Segregation and condensation complex subunit ScpB EW093_00345 PF02616 Segregation and condensation protein ScpA EW093_00350 PF03764 Elongation factor G, domain IV EW093_00350 PF00679 Elongation factor G C-terminus EW093_00350 PF14492 Elongation Factor G, domain II EW093_00350 PF00009 Elongation factor Tu GTP binding domain EW093_00350 PF03144 Elongation factor Tu domain 2 EW093_00360 PF13307 Helicase C-terminal domain EW093_00360 PF06733 DEAD_2 EW093_00370 PF02774 Semialdehyde dehydrogenase, dimerisation domain EW093_00370 PF01118 Semialdehyde dehydrogenase, NAD binding domain EW093_00375 PF00696 Amino acid kinase family EW093_00375 PF01842 ACT domain EW093_00400 PF00916 Sulfate permease family EW093_00400 PF01740 STAS domain EW093_00405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EW093_00405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EW093_00405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EW093_00405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EW093_00410 PF02127 Aminopeptidase I zinc metalloprotease (M18) EW093_00415 PF01027 Inhibitor of apoptosis-promoting Bax1 EW093_00425 PF02653 Branched-chain amino acid transport system / permease component EW093_00430 PF00005 ABC transporter EW093_00435 PF01476 LysM domain EW093_00435 PF01464 Transglycosylase SLT domain EW093_00440 PF02502 Ribose/Galactose Isomerase EW093_00445 PF04620 Flagellar filament outer layer protein Flaa EW093_00455 PF01520 N-acetylmuramoyl-L-alanine amidase EW093_00460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EW093_00460 PF02844 Phosphoribosylglycinamide synthetase, N domain EW093_00460 PF02843 Phosphoribosylglycinamide synthetase, C domain EW093_00470 PF02348 Cytidylyltransferase EW093_00480 PF13186 Iron-sulfur cluster-binding domain EW093_00490 PF02601 Exonuclease VII, large subunit EW093_00490 PF13742 OB-fold nucleic acid binding domain EW093_00495 PF02609 Exonuclease VII small subunit EW093_00575 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EW093_00575 PF02142 MGS-like domain EW093_00575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EW093_00580 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EW093_00580 PF00117 Glutamine amidotransferase class-I EW093_00585 PF00156 Phosphoribosyl transferase domain EW093_00590 PF00814 Glycoprotease family EW093_00615 PF01103 Surface antigen EW093_00615 PF07244 Surface antigen variable number repeat EW093_00630 PF02472 Biopolymer transport protein ExbD/TolR EW093_00635 PF01618 MotA/TolQ/ExbB proton channel family EW093_00645 PF02223 Thymidylate kinase EW093_00655 PF02653 Branched-chain amino acid transport system / permease component EW093_00660 PF00005 ABC transporter EW093_00665 PF13407 Periplasmic binding protein domain EW093_00670 PF13407 Periplasmic binding protein domain EW093_00675 PF00072 Response regulator receiver domain EW093_00680 PF06580 Histidine kinase EW093_00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_00680 PF00672 HAMP domain EW093_00680 PF02743 Cache domain EW093_00690 PF02547 Queuosine biosynthesis protein EW093_00695 PF17864 RuvB AAA lid domain EW093_00695 PF05496 Holliday junction DNA helicase RuvB P-loop domain EW093_00695 PF05491 RuvB C-terminal winged helix domain EW093_00700 PF01330 RuvA N terminal domain EW093_00700 PF07499 RuvA, C-terminal domain EW093_00705 PF02075 Crossover junction endodeoxyribonuclease RuvC EW093_00710 PF01709 Transcriptional regulator EW093_00715 PF00211 Adenylate and Guanylate cyclase catalytic domain EW093_00715 PF00672 HAMP domain EW093_00725 PF00300 Histidine phosphatase superfamily (branch 1) EW093_00730 PF02811 PHP domain EW093_00765 PF12705 PD-(D/E)XK nuclease superfamily EW093_00765 PF13361 UvrD-like helicase C-terminal domain EW093_00765 PF00580 UvrD/REP helicase N-terminal domain EW093_00775 PF00271 Helicase conserved C-terminal domain EW093_00775 PF00176 SNF2 family N-terminal domain EW093_00800 PF01555 DNA methylase EW093_00800 PF18273 Type III R-M EcoP15I C-terminal domain EW093_00805 PF00176 SNF2 family N-terminal domain EW093_00805 PF00271 Helicase conserved C-terminal domain EW093_00810 PF02646 RmuC family EW093_00850 PF12102 Domain of unknown function (DUF3578) EW093_00850 PF07728 AAA domain (dynein-related subfamily) EW093_00860 PF00771 FHIPEP family EW093_00865 PF14480 DNA polymerase III polC-type N-terminus I EW093_00865 PF00929 Exonuclease EW093_00865 PF02811 PHP domain EW093_00865 PF11490 DNA polymerase III polC-type N-terminus II EW093_00865 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EW093_00865 PF07733 Bacterial DNA polymerase III alpha NTPase domain EW093_00865 PF14579 Helix-hairpin-helix motif EW093_00880 PF00771 FHIPEP family EW093_00890 PF07733 Bacterial DNA polymerase III alpha NTPase domain EW093_00890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EW093_00890 PF14579 Helix-hairpin-helix motif EW093_00890 PF02811 PHP domain EW093_00890 PF01336 OB-fold nucleic acid binding domain EW093_00910 PF13361 UvrD-like helicase C-terminal domain EW093_00910 PF00580 UvrD/REP helicase N-terminal domain EW093_00925 PF06803 Protein of unknown function (DUF1232) EW093_00990 PF04002 RadC-like JAB domain EW093_00995 PF04002 RadC-like JAB domain EW093_01010 PF10996 Beta-Casp domain EW093_01010 PF00753 Metallo-beta-lactamase superfamily EW093_01010 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EW093_01020 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EW093_01075 PF13649 Methyltransferase domain EW093_01080 PF13005 zinc-finger binding domain of transposase IS66 EW093_01080 PF13007 Transposase C of IS166 homeodomain EW093_01080 PF13817 IS66 C-terminal element EW093_01080 PF03050 Transposase IS66 family EW093_01180 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EW093_01180 PF18766 SWI2/SNF2 ATPase EW093_01180 PF12008 Type I restriction and modification enzyme - subunit R C terminal EW093_01185 PF06250 YhcG PDDEXK nuclease domain EW093_01185 PF17761 DUF1016 N-terminal domain EW093_01190 PF01420 Type I restriction modification DNA specificity domain EW093_01195 PF02384 N-6 DNA Methylase EW093_01195 PF12161 HsdM N-terminal domain EW093_01240 PF01934 Protein of unknown function DUF86 EW093_01270 PF00873 AcrB/AcrD/AcrF family EW093_01290 PF02687 FtsX-like permease family EW093_01290 PF12704 MacB-like periplasmic core domain EW093_01290 PF00005 ABC transporter EW093_01295 PF00005 ABC transporter EW093_01345 PF00196 Bacterial regulatory proteins, luxR family EW093_01345 PF00072 Response regulator receiver domain EW093_01365 PF13361 UvrD-like helicase C-terminal domain EW093_01365 PF00580 UvrD/REP helicase N-terminal domain EW093_01365 PF12705 PD-(D/E)XK nuclease superfamily EW093_01405 PF01695 IstB-like ATP binding protein EW093_01415 PF07804 HipA-like C-terminal domain EW093_01435 PF13649 Methyltransferase domain EW093_01450 PF01451 Low molecular weight phosphotyrosine protein phosphatase EW093_01455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EW093_01455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EW093_01490 PF00271 Helicase conserved C-terminal domain EW093_01490 PF04408 Helicase associated domain (HA2) EW093_01490 PF00270 DEAD/DEAH box helicase EW093_01490 PF08482 ATP-dependent helicase C-terminal EW093_01495 PF02610 L-arabinose isomerase EW093_01495 PF11762 L-arabinose isomerase C-terminal domain EW093_01500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EW093_01500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EW093_01510 PF00356 Bacterial regulatory proteins, lacI family EW093_01520 PF00331 Glycosyl hydrolase family 10 EW093_01520 PF00756 Putative esterase EW093_01520 PF03422 Carbohydrate binding module (family 6) EW093_01520 PF00404 Dockerin type I domain EW093_01525 PF12833 Helix-turn-helix domain EW093_01530 PF04616 Glycosyl hydrolases family 43 EW093_01540 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain EW093_01540 PF04616 Glycosyl hydrolases family 43 EW093_01550 PF01270 Glycosyl hydrolases family 8 EW093_01555 PF00528 Binding-protein-dependent transport system inner membrane component EW093_01560 PF00528 Binding-protein-dependent transport system inner membrane component EW093_01570 PF00072 Response regulator receiver domain EW093_01570 PF12833 Helix-turn-helix domain EW093_01575 PF02743 Cache domain EW093_01575 PF00672 HAMP domain EW093_01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_01575 PF06580 Histidine kinase EW093_01580 PF00331 Glycosyl hydrolase family 10 EW093_01580 PF02018 Carbohydrate binding domain EW093_01580 PF06452 Carbohydrate family 9 binding domain-like EW093_01585 PF07477 Glycosyl hydrolase family 67 C-terminus EW093_01585 PF07488 Glycosyl hydrolase family 67 middle domain EW093_01585 PF03648 Glycosyl hydrolase family 67 N-terminus EW093_01605 PF00005 ABC transporter EW093_01605 PF08402 TOBE domain EW093_01610 PF00528 Binding-protein-dependent transport system inner membrane component EW093_01620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EW093_01620 PF03466 LysR substrate binding domain EW093_01625 PF03590 Aspartate-ammonia ligase EW093_01630 PF00248 Aldo/keto reductase family EW093_01635 PF01545 Cation efflux family EW093_01645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_01645 PF02743 Cache domain EW093_01645 PF00672 HAMP domain EW093_01650 PF02785 Biotin carboxylase C-terminal domain EW093_01650 PF00289 Biotin carboxylase, N-terminal domain EW093_01650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EW093_01655 PF05726 Pirin C-terminal cupin domain EW093_01655 PF02678 Pirin EW093_01660 PF01546 Peptidase family M20/M25/M40 EW093_01660 PF07687 Peptidase dimerisation domain EW093_01665 PF00005 ABC transporter EW093_01675 PF13190 PDGLE domain EW093_01675 PF01891 Cobalt uptake substrate-specific transmembrane region EW093_01685 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EW093_01690 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_01690 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EW093_01695 PF02492 CobW/HypB/UreG, nucleotide-binding domain EW093_01715 PF03942 DTW domain EW093_01725 PF00317 Ribonucleotide reductase, all-alpha domain EW093_01725 PF02867 Ribonucleotide reductase, barrel domain EW093_01725 PF03477 ATP cone domain EW093_01750 PF00892 EamA-like transporter family EW093_01755 PF00265 Thymidine kinase EW093_01765 PF00793 DAHP synthetase I family EW093_01770 PF01915 Glycosyl hydrolase family 3 C-terminal domain EW093_01770 PF00933 Glycosyl hydrolase family 3 N terminal domain EW093_01775 PF00205 Thiamine pyrophosphate enzyme, central domain EW093_01775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EW093_01775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EW093_01780 PF10369 Small subunit of acetolactate synthase EW093_01790 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EW093_01790 PF01676 Metalloenzyme superfamily EW093_01800 PF00534 Glycosyl transferases group 1 EW093_01800 PF08323 Starch synthase catalytic domain EW093_01830 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EW093_01835 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EW093_01835 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EW093_01840 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EW093_01840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EW093_01855 PF00465 Iron-containing alcohol dehydrogenase EW093_01860 PF10114 Sensory domain found in PocR EW093_01860 PF12833 Helix-turn-helix domain EW093_01875 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system EW093_01880 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EW093_01910 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_01910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EW093_01915 PF04055 Radical SAM superfamily EW093_01920 PF03099 Biotin/lipoate A/B protein ligase family EW093_01925 PF00266 Aminotransferase class-V EW093_01930 PF02347 Glycine cleavage system P-protein EW093_01935 PF01597 Glycine cleavage H-protein EW093_01940 PF01571 Aminomethyltransferase folate-binding domain EW093_01940 PF08669 Glycine cleavage T-protein C-terminal barrel domain EW093_01950 PF07687 Peptidase dimerisation domain EW093_01950 PF01546 Peptidase family M20/M25/M40 EW093_01955 PF01925 Sulfite exporter TauE/SafE EW093_01970 PF00348 Polyprenyl synthetase EW093_01975 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_01980 PF02424 ApbE family EW093_01985 PF00990 Diguanylate cyclase, GGDEF domain EW093_01985 PF08448 PAS fold EW093_01990 PF09962 Uncharacterized conserved protein (DUF2196) EW093_01995 PF08240 Alcohol dehydrogenase GroES-like domain EW093_01995 PF00107 Zinc-binding dehydrogenase EW093_02000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EW093_02005 PF00873 AcrB/AcrD/AcrF family EW093_02015 PF00672 HAMP domain EW093_02015 PF02743 Cache domain EW093_02015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_02030 PF00270 DEAD/DEAH box helicase EW093_02030 PF00271 Helicase conserved C-terminal domain EW093_02035 PF01906 Putative heavy-metal-binding EW093_02045 PF04542 Sigma-70 region 2 EW093_02045 PF08281 Sigma-70, region 4 EW093_02060 PF03600 Citrate transporter EW093_02065 PF00271 Helicase conserved C-terminal domain EW093_02065 PF00570 HRDC domain EW093_02065 PF16124 RecQ zinc-binding EW093_02065 PF09382 RQC domain EW093_02065 PF00270 DEAD/DEAH box helicase EW093_02100 PF09382 RQC domain EW093_02100 PF16124 RecQ zinc-binding EW093_02100 PF00271 Helicase conserved C-terminal domain EW093_02100 PF00270 DEAD/DEAH box helicase EW093_02100 PF00570 HRDC domain EW093_02105 PF00583 Acetyltransferase (GNAT) family EW093_02115 PF03193 RsgA GTPase EW093_02130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_02130 PF00672 HAMP domain EW093_02130 PF02203 Tar ligand binding domain homologue EW093_02135 PF12833 Helix-turn-helix domain EW093_02135 PF02311 AraC-like ligand binding domain EW093_02145 PF00703 Glycosyl hydrolases family 2 EW093_02145 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EW093_02145 PF02837 Glycosyl hydrolases family 2, sugar binding domain EW093_02145 PF16355 Domain of unknown function (DUF4982) EW093_02160 PF12729 Four helix bundle sensory module for signal transduction EW093_02160 PF00672 HAMP domain EW093_02160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_02165 PF11842 Domain of unknown function (DUF3362) EW093_02165 PF04055 Radical SAM superfamily EW093_02165 PF08497 Radical SAM N-terminal EW093_02185 PF03412 Peptidase C39 family EW093_02185 PF00005 ABC transporter EW093_02185 PF00664 ABC transporter transmembrane region EW093_02235 PF13005 zinc-finger binding domain of transposase IS66 EW093_02235 PF13007 Transposase C of IS166 homeodomain EW093_02235 PF03050 Transposase IS66 family EW093_02235 PF13817 IS66 C-terminal element EW093_02290 PF00155 Aminotransferase class I and II EW093_02300 PF08264 Anticodon-binding domain of tRNA EW093_02300 PF00133 tRNA synthetases class I (I, L, M and V) EW093_02300 PF10458 Valyl tRNA synthetase tRNA binding arm EW093_02305 PF00027 Cyclic nucleotide-binding domain EW093_02305 PF13545 Crp-like helix-turn-helix domain EW093_02310 PF00464 Serine hydroxymethyltransferase EW093_02335 PF01406 tRNA synthetases class I (C) catalytic domain EW093_02335 PF09190 DALR domain EW093_02340 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EW093_02340 PF01565 FAD binding domain EW093_02345 PF00571 CBS domain EW093_02345 PF01769 Divalent cation transporter EW093_02345 PF03448 MgtE intracellular N domain EW093_02355 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EW093_02360 PF00004 ATPase family associated with various cellular activities (AAA) EW093_02360 PF07724 AAA domain (Cdc48 subfamily) EW093_02360 PF17871 AAA lid domain EW093_02360 PF02861 Clp amino terminal domain, pathogenicity island component EW093_02360 PF10431 C-terminal, D2-small domain, of ClpB protein EW093_02365 PF02617 ATP-dependent Clp protease adaptor protein ClpS EW093_02385 PF10509 Galactokinase galactose-binding signature EW093_02385 PF08544 GHMP kinases C terminal EW093_02390 PF01197 Ribosomal protein L31 EW093_02395 PF07498 Rho termination factor, N-terminal domain EW093_02395 PF07497 Rho termination factor, RNA-binding domain EW093_02395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EW093_02405 PF00216 Bacterial DNA-binding protein EW093_02410 PF01649 Ribosomal protein S20 EW093_02415 PF04468 PSP1 C-terminal conserved region EW093_02430 PF08525 Opacity-associated protein A N-terminal motif EW093_02430 PF01476 LysM domain EW093_02430 PF01551 Peptidase family M23 EW093_02435 PF01026 TatD related DNase EW093_02440 PF01207 Dihydrouridine synthase (Dus) EW093_02445 PF00156 Phosphoribosyl transferase domain EW093_02450 PF00586 AIR synthase related protein, N-terminal domain EW093_02450 PF02769 AIR synthase related protein, C-terminal domain EW093_02455 PF00551 Formyl transferase EW093_02460 PF02844 Phosphoribosylglycinamide synthetase, N domain EW093_02460 PF02843 Phosphoribosylglycinamide synthetase, C domain EW093_02460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EW093_02470 PF00588 SpoU rRNA Methylase family EW093_02470 PF08032 RNA 2'-O ribose methyltransferase substrate binding EW093_02490 PF01556 DnaJ C terminal domain EW093_02490 PF00684 DnaJ central domain EW093_02490 PF00226 DnaJ domain EW093_02495 PF00012 Hsp70 protein EW093_02500 PF01025 GrpE EW093_02510 PF13419 Haloacid dehalogenase-like hydrolase EW093_02520 PF02472 Biopolymer transport protein ExbD/TolR EW093_02525 PF01618 MotA/TolQ/ExbB proton channel family EW093_02535 PF01926 50S ribosome-binding GTPase EW093_02535 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EW093_02540 PF02896 PEP-utilising enzyme, TIM barrel domain EW093_02540 PF00391 PEP-utilising enzyme, mobile domain EW093_02540 PF05524 PEP-utilising enzyme, N-terminal EW093_02550 PF01022 Bacterial regulatory protein, arsR family EW093_02555 PF00266 Aminotransferase class-V EW093_02560 PF02926 THUMP domain EW093_02560 PF02568 Thiamine biosynthesis protein (ThiI) EW093_02565 PF00977 Histidine biosynthesis protein EW093_02575 PF00180 Isocitrate/isopropylmalate dehydrogenase EW093_02580 PF00682 HMGL-like EW093_02580 PF08502 LeuA allosteric (dimerisation) domain EW093_02585 PF00528 Binding-protein-dependent transport system inner membrane component EW093_02590 PF00528 Binding-protein-dependent transport system inner membrane component EW093_02600 PF00480 ROK family EW093_02605 PF06165 Glycosyltransferase family 36 EW093_02605 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EW093_02615 PF01411 tRNA synthetases class II (A) EW093_02615 PF02272 DHHA1 domain EW093_02615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EW093_02620 PF00375 Sodium:dicarboxylate symporter family EW093_02625 PF04262 Glutamate-cysteine ligase EW093_02625 PF18419 ATP-grasp-like domain EW093_02625 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EW093_02630 PF01174 SNO glutamine amidotransferase family EW093_02635 PF01680 SOR/SNZ family EW093_02640 PF00392 Bacterial regulatory proteins, gntR family EW093_02640 PF00155 Aminotransferase class I and II EW093_02650 PF02384 N-6 DNA Methylase EW093_02660 PF00990 Diguanylate cyclase, GGDEF domain EW093_02670 PF00403 Heavy-metal-associated domain EW093_02675 PF13411 MerR HTH family regulatory protein EW093_02680 PF02743 Cache domain EW093_02680 PF00672 HAMP domain EW093_02680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_02710 PF00294 pfkB family carbohydrate kinase EW093_02720 PF12833 Helix-turn-helix domain EW093_02730 PF17202 Single cache domain 3 EW093_02730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_02730 PF00672 HAMP domain EW093_02735 PF00512 His Kinase A (phospho-acceptor) domain EW093_02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_02735 PF00072 Response regulator receiver domain EW093_02735 PF07494 Two component regulator propeller EW093_02735 PF12833 Helix-turn-helix domain EW093_02735 PF07495 Y_Y_Y domain EW093_02740 PF07670 Nucleoside recognition EW093_02745 PF09297 NADH pyrophosphatase zinc ribbon domain EW093_02745 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EW093_02745 PF00293 NUDIX domain EW093_02750 PF13188 PAS domain EW093_02750 PF00512 His Kinase A (phospho-acceptor) domain EW093_02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_02750 PF00072 Response regulator receiver domain EW093_02750 PF08448 PAS fold EW093_02765 PF08448 PAS fold EW093_02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_02765 PF00512 His Kinase A (phospho-acceptor) domain EW093_02765 PF13188 PAS domain EW093_02765 PF00072 Response regulator receiver domain EW093_02775 PF00528 Binding-protein-dependent transport system inner membrane component EW093_02780 PF00005 ABC transporter EW093_02795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EW093_02795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EW093_02805 PF13411 MerR HTH family regulatory protein EW093_02805 PF06445 GyrI-like small molecule binding domain EW093_02810 PF09382 RQC domain EW093_02810 PF16124 RecQ zinc-binding EW093_02810 PF00570 HRDC domain EW093_02810 PF00271 Helicase conserved C-terminal domain EW093_02810 PF00270 DEAD/DEAH box helicase EW093_02820 PF00528 Binding-protein-dependent transport system inner membrane component EW093_02825 PF00528 Binding-protein-dependent transport system inner membrane component EW093_02830 PF01547 Bacterial extracellular solute-binding protein EW093_02835 PF00356 Bacterial regulatory proteins, lacI family EW093_02840 PF03636 Glycosyl hydrolase family 65, N-terminal domain EW093_02840 PF03632 Glycosyl hydrolase family 65 central catalytic domain EW093_02840 PF03633 Glycosyl hydrolase family 65, C-terminal domain EW093_02845 PF00356 Bacterial regulatory proteins, lacI family EW093_02850 PF05448 Acetyl xylan esterase (AXE1) EW093_02855 PF12833 Helix-turn-helix domain EW093_02855 PF02311 AraC-like ligand binding domain EW093_02860 PF01263 Aldose 1-epimerase EW093_02865 PF00356 Bacterial regulatory proteins, lacI family EW093_02870 PF00919 Uncharacterized protein family UPF0004 EW093_02870 PF04055 Radical SAM superfamily EW093_02875 PF00919 Uncharacterized protein family UPF0004 EW093_02875 PF01938 TRAM domain EW093_02875 PF04055 Radical SAM superfamily EW093_02880 PF00753 Metallo-beta-lactamase superfamily EW093_02880 PF12706 Beta-lactamase superfamily domain EW093_02885 PF00830 Ribosomal L28 family EW093_02895 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B EW093_02900 PF01180 Dihydroorotate dehydrogenase EW093_02910 PF02371 Transposase IS116/IS110/IS902 family EW093_02910 PF01548 Transposase EW093_02920 PF07733 Bacterial DNA polymerase III alpha NTPase domain EW093_02920 PF14579 Helix-hairpin-helix motif EW093_02920 PF02811 PHP domain EW093_02920 PF01336 OB-fold nucleic acid binding domain EW093_02920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EW093_02925 PF01676 Metalloenzyme superfamily EW093_02925 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EW093_02930 PF04536 TPM domain EW093_02955 PF17863 AAA lid domain EW093_02955 PF07726 ATPase family associated with various cellular activities (AAA) EW093_02960 PF00135 Carboxylesterase family EW093_02970 PF00155 Aminotransferase class I and II EW093_02975 PF00072 Response regulator receiver domain EW093_02975 PF00990 Diguanylate cyclase, GGDEF domain EW093_02985 PF00069 Protein kinase domain EW093_02985 PF03793 PASTA domain EW093_02995 PF13537 Glutamine amidotransferase domain EW093_02995 PF00733 Asparagine synthase EW093_03000 PF02073 Thermophilic metalloprotease (M29) EW093_03010 PF01548 Transposase EW093_03010 PF02371 Transposase IS116/IS110/IS902 family EW093_03020 PF00005 ABC transporter EW093_03025 PF00258 Flavodoxin EW093_03045 PF00005 ABC transporter EW093_03065 PF13005 zinc-finger binding domain of transposase IS66 EW093_03065 PF13817 IS66 C-terminal element EW093_03065 PF03050 Transposase IS66 family EW093_03065 PF13007 Transposase C of IS166 homeodomain EW093_03090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EW093_03095 PF00005 ABC transporter EW093_03100 PF00528 Binding-protein-dependent transport system inner membrane component EW093_03105 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_03120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EW093_03120 PF02874 ATP synthase alpha/beta family, beta-barrel domain EW093_03120 PF18269 T3SS EscN ATPase C-terminal domain EW093_03125 PF02108 Flagellar assembly protein FliH EW093_03130 PF14842 FliG N-terminal domain EW093_03130 PF14841 FliG middle domain EW093_03130 PF01706 FliG C-terminal domain EW093_03135 PF08345 Flagellar M-ring protein C-terminal EW093_03135 PF01514 Secretory protein of YscJ/FliF family EW093_03140 PF02049 Flagellar hook-basal body complex protein FliE EW093_03145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EW093_03145 PF00460 Flagella basal body rod protein EW093_03150 PF00460 Flagella basal body rod protein EW093_03155 PF00004 ATPase family associated with various cellular activities (AAA) EW093_03155 PF07724 AAA domain (Cdc48 subfamily) EW093_03160 PF00227 Proteasome subunit EW093_03165 PF00589 Phage integrase family EW093_03165 PF02899 Phage integrase, N-terminal SAM-like domain EW093_03170 PF17782 DprA winged helix domain EW093_03170 PF02481 DNA recombination-mediator protein A EW093_03180 PF02899 Phage integrase, N-terminal SAM-like domain EW093_03180 PF00589 Phage integrase family EW093_03185 PF12327 FtsZ family, C-terminal domain EW093_03185 PF00091 Tubulin/FtsZ family, GTPase domain EW093_03190 PF02491 SHS2 domain inserted in FTSA EW093_03200 PF01098 Cell cycle protein EW093_03205 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EW093_03205 PF00953 Glycosyl transferase family 4 EW093_03210 PF08245 Mur ligase middle domain EW093_03210 PF02875 Mur ligase family, glutamate ligase domain EW093_03210 PF01225 Mur ligase family, catalytic domain EW093_03220 PF01795 MraW methylase family EW093_03225 PF02381 MraZ protein, putative antitoxin-like EW093_03230 PF03065 Glycosyl hydrolase family 57 EW093_03230 PF09210 Domain of unknown function (DUF1957) EW093_03260 PF02463 RecF/RecN/SMC N terminal domain EW093_03265 PF01513 ATP-NAD kinase EW093_03275 PF01584 CheW-like domain EW093_03305 PF02436 Conserved carboxylase domain EW093_03305 PF00682 HMGL-like EW093_03305 PF00364 Biotin-requiring enzyme EW093_03310 PF01039 Carboxyl transferase domain EW093_03315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EW093_03315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EW093_03320 PF00698 Acyl transferase domain EW093_03330 PF00109 Beta-ketoacyl synthase, N-terminal domain EW093_03330 PF02801 Beta-ketoacyl synthase, C-terminal domain EW093_03335 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EW093_03335 PF12241 Trans-2-enoyl-CoA reductase catalytic region EW093_03335 PF07055 Enoyl reductase FAD binding domain EW093_03340 PF00072 Response regulator receiver domain EW093_03345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EW093_03345 PF00072 Response regulator receiver domain EW093_03345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_03345 PF00672 HAMP domain EW093_03345 PF01627 Hpt domain EW093_03345 PF00512 His Kinase A (phospho-acceptor) domain EW093_03350 PF00303 Thymidylate synthase EW093_03355 PF00186 Dihydrofolate reductase EW093_03370 PF00753 Metallo-beta-lactamase superfamily EW093_03380 PF02424 ApbE family EW093_03400 PF02557 D-alanyl-D-alanine carboxypeptidase EW093_03405 PF00152 tRNA synthetases class II (D, K and N) EW093_03405 PF01336 OB-fold nucleic acid binding domain EW093_03420 PF02824 TGS domain EW093_03420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EW093_03420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EW093_03420 PF03129 Anticodon binding domain EW093_03435 PF00004 ATPase family associated with various cellular activities (AAA) EW093_03435 PF10431 C-terminal, D2-small domain, of ClpB protein EW093_03435 PF02861 Clp amino terminal domain, pathogenicity island component EW093_03435 PF17871 AAA lid domain EW093_03435 PF07724 AAA domain (Cdc48 subfamily) EW093_03445 PF00005 ABC transporter EW093_03450 PF02687 FtsX-like permease family EW093_03450 PF12704 MacB-like periplasmic core domain EW093_03460 PF02881 SRP54-type protein, helical bundle domain EW093_03460 PF00448 SRP54-type protein, GTPase domain EW093_03475 PF00072 Response regulator receiver domain EW093_03495 PF04060 Putative Fe-S cluster EW093_03495 PF00037 4Fe-4S binding domain EW093_03495 PF13187 4Fe-4S dicluster domain EW093_03500 PF02508 Rnf-Nqr subunit, membrane protein EW093_03505 PF02508 Rnf-Nqr subunit, membrane protein EW093_03515 PF03116 NQR2, RnfD, RnfE family EW093_03520 PF10531 SLBB domain EW093_03520 PF13375 RnfC Barrel sandwich hybrid domain EW093_03520 PF13237 4Fe-4S dicluster domain EW093_03520 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EW093_03530 PF01479 S4 domain EW093_03530 PF00849 RNA pseudouridylate synthase EW093_03545 PF02578 Multi-copper polyphenol oxidoreductase laccase EW093_03555 PF00271 Helicase conserved C-terminal domain EW093_03555 PF00270 DEAD/DEAH box helicase EW093_03565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EW093_03565 PF03466 LysR substrate binding domain EW093_03615 PF01119 DNA mismatch repair protein, C-terminal domain EW093_03615 PF08676 MutL C terminal dimerisation domain EW093_03625 PF02896 PEP-utilising enzyme, TIM barrel domain EW093_03625 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EW093_03625 PF00391 PEP-utilising enzyme, mobile domain EW093_03640 PF00166 Chaperonin 10 Kd subunit EW093_03645 PF01245 Ribosomal protein L19 EW093_03650 PF01746 tRNA (Guanine-1)-methyltransferase EW093_03655 PF05239 PRC-barrel domain EW093_03655 PF01782 RimM N-terminal domain EW093_03665 PF00886 Ribosomal protein S16 EW093_03670 PF02978 Signal peptide binding domain EW093_03670 PF02881 SRP54-type protein, helical bundle domain EW093_03670 PF00448 SRP54-type protein, GTPase domain EW093_03685 PF02463 RecF/RecN/SMC N terminal domain EW093_03685 PF06470 SMC proteins Flexible Hinge Domain EW093_03695 PF04055 Radical SAM superfamily EW093_03700 PF00313 'Cold-shock' DNA-binding domain EW093_03705 PF00271 Helicase conserved C-terminal domain EW093_03705 PF00270 DEAD/DEAH box helicase EW093_03705 PF03880 DbpA RNA binding domain EW093_03710 PF00005 ABC transporter EW093_03725 PF01625 Peptide methionine sulfoxide reductase EW093_03730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_03730 PF00512 His Kinase A (phospho-acceptor) domain EW093_03730 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_03740 PF01883 Iron-sulfur cluster assembly protein EW093_03740 PF10609 NUBPL iron-transfer P-loop NTPase EW093_03745 PF01554 MatE EW093_03755 PF01184 GPR1/FUN34/yaaH family EW093_03765 PF00664 ABC transporter transmembrane region EW093_03765 PF00005 ABC transporter EW093_03775 PF14310 Fibronectin type III-like domain EW093_03775 PF00933 Glycosyl hydrolase family 3 N terminal domain EW093_03775 PF01915 Glycosyl hydrolase family 3 C-terminal domain EW093_03785 PF08361 MAATS-type transcriptional repressor, C-terminal region EW093_03785 PF00440 Bacterial regulatory proteins, tetR family EW093_03795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EW093_03795 PF00005 ABC transporter EW093_03800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EW093_03800 PF00005 ABC transporter EW093_03805 PF00528 Binding-protein-dependent transport system inner membrane component EW093_03805 PF12911 N-terminal TM domain of oligopeptide transport permease C EW093_03810 PF00528 Binding-protein-dependent transport system inner membrane component EW093_03815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EW093_03820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EW093_03830 PF00501 AMP-binding enzyme EW093_03835 PF02954 Bacterial regulatory protein, Fis family EW093_03835 PF00072 Response regulator receiver domain EW093_03835 PF00158 Sigma-54 interaction domain EW093_03840 PF17991 Thioredoxin like C-terminal domain EW093_03840 PF02683 Cytochrome C biogenesis protein transmembrane region EW093_03840 PF00578 AhpC/TSA family EW093_03845 PF01625 Peptide methionine sulfoxide reductase EW093_03845 PF01641 SelR domain EW093_03855 PF01047 MarR family EW093_03860 PF02371 Transposase IS116/IS110/IS902 family EW093_03860 PF01548 Transposase EW093_03865 PF00664 ABC transporter transmembrane region EW093_03865 PF00005 ABC transporter EW093_03870 PF00664 ABC transporter transmembrane region EW093_03870 PF00005 ABC transporter EW093_03880 PF00873 AcrB/AcrD/AcrF family EW093_03905 PF16736 Single Cache-like EW093_03905 PF00989 PAS fold EW093_03905 PF00512 His Kinase A (phospho-acceptor) domain EW093_03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_03910 PF00486 Transcriptional regulatory protein, C terminal EW093_03910 PF00072 Response regulator receiver domain EW093_03915 PF00248 Aldo/keto reductase family EW093_03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_03920 PF00512 His Kinase A (phospho-acceptor) domain EW093_03920 PF00989 PAS fold EW093_03920 PF16736 Single Cache-like EW093_03930 PF04474 Protein of unknown function (DUF554) EW093_03935 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EW093_03935 PF12557 Cob(I)alamin adenosyltransferase N terminal EW093_03970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EW093_03980 PF02001 Protein of unknown function DUF134 EW093_04000 PF01381 Helix-turn-helix EW093_04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_04015 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_04015 PF00512 His Kinase A (phospho-acceptor) domain EW093_04020 PF01899 Na+/H+ ion antiporter subunit EW093_04025 PF12838 4Fe-4S dicluster domain EW093_04030 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EW093_04035 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EW093_04040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EW093_04050 PF00361 Proton-conducting membrane transporter EW093_04055 PF00361 Proton-conducting membrane transporter EW093_04060 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EW093_04080 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EW093_04085 PF00300 Histidine phosphatase superfamily (branch 1) EW093_04090 PF02654 Cobalamin-5-phosphate synthase EW093_04095 PF02277 Phosphoribosyltransferase EW093_04100 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EW093_04105 PF07724 AAA domain (Cdc48 subfamily) EW093_04105 PF10431 C-terminal, D2-small domain, of ClpB protein EW093_04105 PF02861 Clp amino terminal domain, pathogenicity island component EW093_04105 PF17871 AAA lid domain EW093_04105 PF00004 ATPase family associated with various cellular activities (AAA) EW093_04115 PF00585 C-terminal regulatory domain of Threonine dehydratase EW093_04115 PF00291 Pyridoxal-phosphate dependent enzyme EW093_04120 PF00128 Alpha amylase, catalytic domain EW093_04120 PF16657 Maltogenic Amylase, C-terminal domain EW093_04125 PF00356 Bacterial regulatory proteins, lacI family EW093_04135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_04135 PF00672 HAMP domain EW093_04135 PF02743 Cache domain EW093_04140 PF00512 His Kinase A (phospho-acceptor) domain EW093_04140 PF08448 PAS fold EW093_04140 PF13188 PAS domain EW093_04140 PF00072 Response regulator receiver domain EW093_04140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_04145 PF00300 Histidine phosphatase superfamily (branch 1) EW093_04150 PF08240 Alcohol dehydrogenase GroES-like domain EW093_04150 PF00107 Zinc-binding dehydrogenase EW093_04155 PF13520 Amino acid permease EW093_04165 PF01323 DSBA-like thioredoxin domain EW093_04175 PF00881 Nitroreductase family EW093_04180 PF00232 Glycosyl hydrolase family 1 EW093_04195 PF04851 Type III restriction enzyme, res subunit EW093_04195 PF00271 Helicase conserved C-terminal domain EW093_04205 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EW093_04205 PF01488 Shikimate / quinate 5-dehydrogenase EW093_04205 PF08501 Shikimate dehydrogenase substrate binding domain EW093_04240 PF00180 Isocitrate/isopropylmalate dehydrogenase EW093_04250 PF01476 LysM domain EW093_04250 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EW093_04265 PF16326 ABC transporter C-terminal domain EW093_04265 PF12848 ABC transporter EW093_04265 PF00005 ABC transporter EW093_04275 PF03462 PCRF domain EW093_04275 PF00472 RF-1 domain EW093_04280 PF05175 Methyltransferase small domain EW093_04280 PF17827 PrmC N-terminal domain EW093_04285 PF02824 TGS domain EW093_04285 PF04607 Region found in RelA / SpoT proteins EW093_04285 PF13291 ACT domain EW093_04300 PF01965 DJ-1/PfpI family EW093_04305 PF01743 Poly A polymerase head domain EW093_04305 PF12626 Polymerase A arginine-rich C-terminus EW093_04305 PF12627 Probable RNA and SrmB- binding site of polymerase A EW093_04310 PF07228 Stage II sporulation protein E (SpoIIE) EW093_04310 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain EW093_04325 PF00480 ROK family EW093_04330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EW093_04330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EW093_04335 PF00211 Adenylate and Guanylate cyclase catalytic domain EW093_04340 PF00072 Response regulator receiver domain EW093_04340 PF09308 LuxQ, periplasmic EW093_04340 PF00512 His Kinase A (phospho-acceptor) domain EW093_04340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_04345 PF13840 ACT domain EW093_04345 PF00696 Amino acid kinase family EW093_04345 PF01842 ACT domain EW093_04345 PF03447 Homoserine dehydrogenase, NAD binding domain EW093_04345 PF00742 Homoserine dehydrogenase EW093_04350 PF00990 Diguanylate cyclase, GGDEF domain EW093_04360 PF02586 SOS response associated peptidase (SRAP) EW093_04365 PF11798 IMS family HHH motif EW093_04365 PF11799 impB/mucB/samB family C-terminal domain EW093_04365 PF00817 impB/mucB/samB family EW093_04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_04370 PF00072 Response regulator receiver domain EW093_04375 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EW093_04380 PF01551 Peptidase family M23 EW093_04395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EW093_04395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EW093_04400 PF00459 Inositol monophosphatase family EW093_04410 PF02806 Alpha amylase, C-terminal all-beta domain EW093_04410 PF00128 Alpha amylase, catalytic domain EW093_04410 PF03714 Bacterial pullanase-associated domain EW093_04415 PF00196 Bacterial regulatory proteins, luxR family EW093_04415 PF00072 Response regulator receiver domain EW093_04430 PF03714 Bacterial pullanase-associated domain EW093_04430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EW093_04430 PF00128 Alpha amylase, catalytic domain EW093_04465 PF03824 High-affinity nickel-transport protein EW093_04480 PF11941 Domain of unknown function (DUF3459) EW093_04480 PF00128 Alpha amylase, catalytic domain EW093_04485 PF00128 Alpha amylase, catalytic domain EW093_04485 PF03714 Bacterial pullanase-associated domain EW093_04485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EW093_04510 PF00324 Amino acid permease EW093_04515 PF00072 Response regulator receiver domain EW093_04515 PF01339 CheB methylesterase EW093_04520 PF01739 CheR methyltransferase, SAM binding domain EW093_04520 PF03705 CheR methyltransferase, all-alpha domain EW093_04525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_04525 PF01584 CheW-like domain EW093_04525 PF07194 P2 response regulator binding domain EW093_04525 PF01627 Hpt domain EW093_04525 PF02895 Signal transducing histidine kinase, homodimeric domain EW093_04535 PF01584 CheW-like domain EW093_04540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_04540 PF00672 HAMP domain EW093_04540 PF02203 Tar ligand binding domain homologue EW093_04545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EW093_04545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EW093_04565 PF08543 Phosphomethylpyrimidine kinase EW093_04570 PF01202 Shikimate kinase EW093_04580 PF00551 Formyl transferase EW093_04580 PF02911 Formyl transferase, C-terminal domain EW093_04585 PF01327 Polypeptide deformylase EW093_04590 PF00962 Adenosine/AMP deaminase EW093_04595 PF00117 Glutamine amidotransferase class-I EW093_04605 PF00133 tRNA synthetases class I (I, L, M and V) EW093_04605 PF08264 Anticodon-binding domain of tRNA EW093_04615 PF08534 Redoxin EW093_04635 PF00892 EamA-like transporter family EW093_04640 PF00557 Metallopeptidase family M24 EW093_04640 PF01321 Creatinase/Prolidase N-terminal domain EW093_04645 PF00528 Binding-protein-dependent transport system inner membrane component EW093_04650 PF00571 CBS domain EW093_04650 PF00005 ABC transporter EW093_04660 PF00282 Pyridoxal-dependent decarboxylase conserved domain EW093_04665 PF01268 Formate--tetrahydrofolate ligase EW093_04670 PF00155 Aminotransferase class I and II EW093_04680 PF17676 LD-carboxypeptidase C-terminal domain EW093_04680 PF02016 LD-carboxypeptidase N-terminal domain EW093_04685 PF01926 50S ribosome-binding GTPase EW093_04685 PF06071 Protein of unknown function (DUF933) EW093_04690 PF08003 Protein of unknown function (DUF1698) EW093_04695 PF13649 Methyltransferase domain EW093_04770 PF01195 Peptidyl-tRNA hydrolase EW093_04775 PF01195 Peptidyl-tRNA hydrolase EW093_04780 PF01048 Phosphorylase superfamily EW093_04785 PF02664 S-Ribosylhomocysteinase (LuxS) EW093_04800 PF12833 Helix-turn-helix domain EW093_04800 PF00072 Response regulator receiver domain EW093_04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_04805 PF06580 Histidine kinase EW093_04805 PF00672 HAMP domain EW093_04805 PF02743 Cache domain EW093_04815 PF01547 Bacterial extracellular solute-binding protein EW093_04825 PF00528 Binding-protein-dependent transport system inner membrane component EW093_04830 PF00528 Binding-protein-dependent transport system inner membrane component EW093_04835 PF00989 PAS fold EW093_04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_04835 PF13188 PAS domain EW093_04835 PF13426 PAS domain EW093_04835 PF00512 His Kinase A (phospho-acceptor) domain EW093_04850 PF03975 CheD chemotactic sensory transduction EW093_04865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EW093_04870 PF02152 Dihydroneopterin aldolase EW093_04875 PF00809 Pterin binding enzyme EW093_04880 PF01227 GTP cyclohydrolase I EW093_04885 PF01812 5-formyltetrahydrofolate cyclo-ligase family EW093_04895 PF12002 MgsA AAA+ ATPase C terminal EW093_04895 PF16193 AAA C-terminal domain EW093_04895 PF00004 ATPase family associated with various cellular activities (AAA) EW093_04920 PF05698 Bacterial trigger factor protein (TF) C-terminus EW093_04920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EW093_04920 PF05697 Bacterial trigger factor protein (TF) EW093_04925 PF00574 Clp protease EW093_04930 PF10431 C-terminal, D2-small domain, of ClpB protein EW093_04930 PF07724 AAA domain (Cdc48 subfamily) EW093_04930 PF06689 ClpX C4-type zinc finger EW093_04935 PF02190 ATP-dependent protease La (LON) substrate-binding domain EW093_04935 PF05362 Lon protease (S16) C-terminal proteolytic domain EW093_04935 PF00004 ATPase family associated with various cellular activities (AAA) EW093_04940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EW093_04940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EW093_04950 PF01368 DHH family EW093_04950 PF02833 DHHA2 domain EW093_04960 PF00156 Phosphoribosyl transferase domain EW093_05045 PF01554 MatE EW093_05055 PF00005 ABC transporter EW093_05060 PF00528 Binding-protein-dependent transport system inner membrane component EW093_05065 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_05070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_05070 PF02743 Cache domain EW093_05070 PF00672 HAMP domain EW093_05080 PF02743 Cache domain EW093_05080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_05080 PF00672 HAMP domain EW093_05085 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EW093_05085 PF16353 Domain of unknown function(DUF4981) EW093_05085 PF00703 Glycosyl hydrolases family 2 EW093_05085 PF02929 Beta galactosidase small chain EW093_05085 PF02837 Glycosyl hydrolases family 2, sugar binding domain EW093_05090 PF12833 Helix-turn-helix domain EW093_05090 PF02311 AraC-like ligand binding domain EW093_05095 PF00155 Aminotransferase class I and II EW093_05100 PF03186 CobD/Cbib protein EW093_05105 PF07685 CobB/CobQ-like glutamine amidotransferase domain EW093_05110 PF02417 Chromate transporter EW093_05120 PF00672 HAMP domain EW093_05120 PF01966 HD domain EW093_05125 PF01594 AI-2E family transporter EW093_05130 PF00266 Aminotransferase class-V EW093_05140 PF00512 His Kinase A (phospho-acceptor) domain EW093_05140 PF17149 Periplasmic sensor domain found in signal transduction proteins EW093_05140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_05140 PF00672 HAMP domain EW093_05140 PF00072 Response regulator receiver domain EW093_05140 PF01627 Hpt domain EW093_05150 PF05683 Fumarase C-terminus EW093_05150 PF05681 Fumarate hydratase (Fumerase) EW093_05155 PF05681 Fumarate hydratase (Fumerase) EW093_05175 PF01809 Putative membrane protein insertion efficiency factor EW093_05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_05180 PF00672 HAMP domain EW093_05180 PF02743 Cache domain EW093_05180 PF06580 Histidine kinase EW093_05185 PF00072 Response regulator receiver domain EW093_05185 PF12833 Helix-turn-helix domain EW093_05195 PF00528 Binding-protein-dependent transport system inner membrane component EW093_05200 PF00528 Binding-protein-dependent transport system inner membrane component EW093_05205 PF00999 Sodium/hydrogen exchanger family EW093_05215 PF06874 Firmicute fructose-1,6-bisphosphatase EW093_05220 PF00171 Aldehyde dehydrogenase family EW093_05230 PF02421 Ferrous iron transport protein B EW093_05230 PF07664 Ferrous iron transport protein B C terminus EW093_05230 PF07670 Nucleoside recognition EW093_05240 PF05175 Methyltransferase small domain EW093_05245 PF02086 D12 class N6 adenine-specific DNA methyltransferase EW093_05255 PF08245 Mur ligase middle domain EW093_05255 PF01225 Mur ligase family, catalytic domain EW093_05255 PF02875 Mur ligase family, glutamate ligase domain EW093_05260 PF02681 Divergent PAP2 family EW093_05270 PF00665 Integrase core domain EW093_05270 PF13936 Helix-turn-helix domain EW093_05285 PF00005 ABC transporter EW093_05290 PF03050 Transposase IS66 family EW093_05290 PF13817 IS66 C-terminal element EW093_05290 PF13007 Transposase C of IS166 homeodomain EW093_05290 PF13005 zinc-finger binding domain of transposase IS66 EW093_05305 PF00005 ABC transporter EW093_05305 PF12704 MacB-like periplasmic core domain EW093_05305 PF02687 FtsX-like permease family EW093_05320 PF00005 ABC transporter EW093_05320 PF00664 ABC transporter transmembrane region EW093_05325 PF03050 Transposase IS66 family EW093_05325 PF13005 zinc-finger binding domain of transposase IS66 EW093_05325 PF13817 IS66 C-terminal element EW093_05325 PF13007 Transposase C of IS166 homeodomain EW093_05340 PF00005 ABC transporter EW093_05340 PF00664 ABC transporter transmembrane region EW093_05350 PF13005 zinc-finger binding domain of transposase IS66 EW093_05350 PF13817 IS66 C-terminal element EW093_05350 PF03050 Transposase IS66 family EW093_05350 PF13007 Transposase C of IS166 homeodomain EW093_05375 PF01695 IstB-like ATP binding protein EW093_05385 PF01820 D-ala D-ala ligase N-terminus EW093_05385 PF07478 D-ala D-ala ligase C-terminus EW093_05390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EW093_05390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EW093_05400 PF00072 Response regulator receiver domain EW093_05400 PF00196 Bacterial regulatory proteins, luxR family EW093_05425 PF02347 Glycine cleavage system P-protein EW093_05440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EW093_05440 PF00037 4Fe-4S binding domain EW093_05440 PF02906 Iron only hydrogenase large subunit, C-terminal domain EW093_05440 PF02256 Iron hydrogenase small subunit EW093_05445 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EW093_05445 PF00037 4Fe-4S binding domain EW093_05445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EW093_05465 PF02629 CoA binding domain EW093_05465 PF06971 Putative DNA-binding protein N-terminus EW093_05470 PF13581 Histidine kinase-like ATPase domain EW093_05485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_05485 PF00512 His Kinase A (phospho-acceptor) domain EW093_05485 PF00989 PAS fold EW093_05485 PF00672 HAMP domain EW093_05490 PF00072 Response regulator receiver domain EW093_05490 PF00486 Transcriptional regulatory protein, C terminal EW093_05500 PF01554 MatE EW093_05510 PF00085 Thioredoxin EW093_05590 PF00665 Integrase core domain EW093_05590 PF13333 Integrase core domain EW093_05590 PF13276 HTH-like domain EW093_05595 PF01527 Transposase EW093_05625 PF13817 IS66 C-terminal element EW093_05625 PF03050 Transposase IS66 family EW093_05625 PF13007 Transposase C of IS166 homeodomain EW093_05625 PF13005 zinc-finger binding domain of transposase IS66 EW093_05650 PF00263 Bacterial type II and III secretion system protein EW093_05650 PF03958 Bacterial type II/III secretion system short domain EW093_05655 PF00437 Type II/IV secretion system protein EW093_05660 PF00482 Type II secretion system (T2SS), protein F EW093_05680 PF07963 Prokaryotic N-terminal methylation motif EW093_05680 PF08334 Type II secretion system (T2SS), protein G EW093_05735 PF00579 tRNA synthetases class I (W and Y) EW093_05740 PF13187 4Fe-4S dicluster domain EW093_05745 PF13187 4Fe-4S dicluster domain EW093_05750 PF00152 tRNA synthetases class II (D, K and N) EW093_05755 PF09285 Elongation factor P, C-terminal EW093_05755 PF08207 Elongation factor P (EF-P) KOW-like domain EW093_05755 PF01132 Elongation factor P (EF-P) OB domain EW093_05765 PF05552 Conserved TM helix EW093_05765 PF00924 Mechanosensitive ion channel EW093_05770 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EW093_05770 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EW093_05770 PF10371 Domain of unknown function EW093_05770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EW093_05770 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EW093_05775 PF01053 Cys/Met metabolism PLP-dependent enzyme EW093_05780 PF01053 Cys/Met metabolism PLP-dependent enzyme EW093_05790 PF00271 Helicase conserved C-terminal domain EW093_05790 PF04434 SWIM zinc finger EW093_05790 PF00176 SNF2 family N-terminal domain EW093_05800 PF02386 Cation transport protein EW093_05805 PF01261 Xylose isomerase-like TIM barrel EW093_05810 PF02743 Cache domain EW093_05810 PF00672 HAMP domain EW093_05810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_05815 PF16875 Glycosyl hydrolase family 36 N-terminal domain EW093_05815 PF16874 Glycosyl hydrolase family 36 C-terminal domain EW093_05820 PF02311 AraC-like ligand binding domain EW093_05820 PF12833 Helix-turn-helix domain EW093_05845 PF01569 PAP2 superfamily EW093_05880 PF02401 LytB protein EW093_05890 PF02355 Protein export membrane protein EW093_05895 PF02355 Protein export membrane protein EW093_05900 PF02699 Preprotein translocase subunit EW093_05910 PF00118 TCP-1/cpn60 chaperonin family EW093_05915 PF08279 HTH domain EW093_05915 PF02237 Biotin protein ligase C terminal domain EW093_05915 PF03099 Biotin/lipoate A/B protein ligase family EW093_05925 PF01316 Arginine repressor, DNA binding domain EW093_05925 PF02863 Arginine repressor, C-terminal domain EW093_05930 PF02774 Semialdehyde dehydrogenase, dimerisation domain EW093_05930 PF01118 Semialdehyde dehydrogenase, NAD binding domain EW093_05935 PF00696 Amino acid kinase family EW093_05940 PF00202 Aminotransferase class-III EW093_05945 PF00764 Arginosuccinate synthase EW093_05950 PF00211 Adenylate and Guanylate cyclase catalytic domain EW093_05960 PF00342 Phosphoglucose isomerase EW093_05965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_05965 PF00672 HAMP domain EW093_05965 PF05227 CHASE3 domain EW093_05970 PF00365 Phosphofructokinase EW093_05975 PF00005 ABC transporter EW093_05975 PF03459 TOBE domain EW093_06025 PF00005 ABC transporter EW093_06030 PF12706 Beta-lactamase superfamily domain EW093_06030 PF00753 Metallo-beta-lactamase superfamily EW093_06035 PF13091 PLD-like domain EW093_06035 PF13396 Phospholipase_D-nuclease N-terminal EW093_06040 PF03553 Na+/H+ antiporter family EW093_06060 PF00809 Pterin binding enzyme EW093_06060 PF02310 B12 binding domain EW093_06060 PF02574 Homocysteine S-methyltransferase EW093_06060 PF02965 Vitamin B12 dependent methionine synthase, activation domain EW093_06060 PF02607 B12 binding domain EW093_06065 PF01966 HD domain EW093_06065 PF13286 Phosphohydrolase-associated domain EW093_06070 PF13426 PAS domain EW093_06070 PF00563 EAL domain EW093_06070 PF00990 Diguanylate cyclase, GGDEF domain EW093_06080 PF00860 Permease family EW093_06085 PF02659 Putative manganese efflux pump EW093_06095 PF01212 Beta-eliminating lyase EW093_06100 PF00392 Bacterial regulatory proteins, gntR family EW093_06110 PF00528 Binding-protein-dependent transport system inner membrane component EW093_06115 PF00528 Binding-protein-dependent transport system inner membrane component EW093_06125 PF07470 Glycosyl Hydrolase Family 88 EW093_06140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_06140 PF00672 HAMP domain EW093_06140 PF00512 His Kinase A (phospho-acceptor) domain EW093_06150 PF00485 Phosphoribulokinase / Uridine kinase family EW093_06150 PF16875 Glycosyl hydrolase family 36 N-terminal domain EW093_06150 PF16874 Glycosyl hydrolase family 36 C-terminal domain EW093_06155 PF00128 Alpha amylase, catalytic domain EW093_06155 PF16657 Maltogenic Amylase, C-terminal domain EW093_06160 PF00356 Bacterial regulatory proteins, lacI family EW093_06170 PF07664 Ferrous iron transport protein B C terminus EW093_06170 PF02421 Ferrous iron transport protein B EW093_06170 PF07670 Nucleoside recognition EW093_06170 PF17910 FeoB cytosolic helical domain EW093_06185 PF00072 Response regulator receiver domain EW093_06190 PF00072 Response regulator receiver domain EW093_06190 PF00990 Diguanylate cyclase, GGDEF domain EW093_06205 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EW093_06205 PF00356 Bacterial regulatory proteins, lacI family EW093_06210 PF02614 Glucuronate isomerase EW093_06215 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EW093_06215 PF08666 SAF domain EW093_06220 PF01232 Mannitol dehydrogenase Rossmann domain EW093_06220 PF08125 Mannitol dehydrogenase C-terminal domain EW093_06225 PF13472 GDSL-like Lipase/Acylhydrolase family EW093_06235 PF07859 alpha/beta hydrolase fold EW093_06235 PF00331 Glycosyl hydrolase family 10 EW093_06240 PF07470 Glycosyl Hydrolase Family 88 EW093_06260 PF00528 Binding-protein-dependent transport system inner membrane component EW093_06265 PF00528 Binding-protein-dependent transport system inner membrane component EW093_06270 PF12833 Helix-turn-helix domain EW093_06275 PF01547 Bacterial extracellular solute-binding protein EW093_06285 PF01554 MatE EW093_06290 PF12833 Helix-turn-helix domain EW093_06290 PF17853 GGDEF-like domain EW093_06295 PF09339 IclR helix-turn-helix domain EW093_06295 PF01614 Bacterial transcriptional regulator EW093_06300 PF04962 KduI/IolB family EW093_06320 PF00563 EAL domain EW093_06320 PF00990 Diguanylate cyclase, GGDEF domain EW093_06320 PF03707 Bacterial signalling protein N terminal repeat EW093_06330 PF01047 MarR family EW093_06340 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_06345 PF00128 Alpha amylase, catalytic domain EW093_06350 PF13193 AMP-binding enzyme C-terminal domain EW093_06350 PF00501 AMP-binding enzyme EW093_06360 PF13411 MerR HTH family regulatory protein EW093_06380 PF00589 Phage integrase family EW093_06380 PF13495 Phage integrase, N-terminal SAM-like domain EW093_06385 PF04986 Putative transposase EW093_06385 PF14319 Transposase zinc-binding domain EW093_06390 PF14319 Transposase zinc-binding domain EW093_06390 PF04986 Putative transposase EW093_06425 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EW093_06435 PF01381 Helix-turn-helix EW093_06450 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EW093_06455 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system EW093_06480 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EW093_06485 PF02386 Cation transport protein EW093_06490 PF00011 Hsp20/alpha crystallin family EW093_06495 PF00011 Hsp20/alpha crystallin family EW093_06520 PF14572 Phosphoribosyl synthetase-associated domain EW093_06520 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EW093_06530 PF08533 Beta-galactosidase C-terminal domain EW093_06530 PF08532 Beta-galactosidase trimerisation domain EW093_06530 PF02449 Beta-galactosidase EW093_06545 PF00528 Binding-protein-dependent transport system inner membrane component EW093_06565 PF00072 Response regulator receiver domain EW093_06565 PF12833 Helix-turn-helix domain EW093_06570 PF02743 Cache domain EW093_06570 PF00672 HAMP domain EW093_06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_06570 PF06580 Histidine kinase EW093_06575 PF06580 Histidine kinase EW093_06575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_06575 PF00672 HAMP domain EW093_06575 PF02743 Cache domain EW093_06580 PF07691 PA14 domain EW093_06580 PF14310 Fibronectin type III-like domain EW093_06580 PF01915 Glycosyl hydrolase family 3 C-terminal domain EW093_06580 PF00933 Glycosyl hydrolase family 3 N terminal domain EW093_06585 PF02311 AraC-like ligand binding domain EW093_06585 PF12833 Helix-turn-helix domain EW093_06590 PF00942 Cellulose binding domain EW093_06590 PF03442 Carbohydrate binding domain X2 EW093_06615 PF13802 Galactose mutarotase-like EW093_06615 PF01055 Glycosyl hydrolases family 31 EW093_06620 PF00232 Glycosyl hydrolase family 1 EW093_06625 PF00512 His Kinase A (phospho-acceptor) domain EW093_06625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_06625 PF08448 PAS fold EW093_06625 PF00072 Response regulator receiver domain EW093_06625 PF13188 PAS domain EW093_06630 PF12833 Helix-turn-helix domain EW093_06635 PF03512 Glycosyl hydrolase family 52 EW093_06645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EW093_06645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EW093_06650 PF02779 Transketolase, pyrimidine binding domain EW093_06650 PF00456 Transketolase, thiamine diphosphate binding domain EW093_06650 PF02780 Transketolase, C-terminal domain EW093_06655 PF00392 Bacterial regulatory proteins, gntR family EW093_06665 PF00528 Binding-protein-dependent transport system inner membrane component EW093_06670 PF00528 Binding-protein-dependent transport system inner membrane component EW093_06675 PF04616 Glycosyl hydrolases family 43 EW093_06685 PF00528 Binding-protein-dependent transport system inner membrane component EW093_06690 PF00528 Binding-protein-dependent transport system inner membrane component EW093_06695 PF00392 Bacterial regulatory proteins, gntR family EW093_06700 PF00990 Diguanylate cyclase, GGDEF domain EW093_06710 PF09345 Domain of unknown function (DUF1987) EW093_06735 PF13847 Methyltransferase domain EW093_06745 PF00543 Nitrogen regulatory protein P-II EW093_06750 PF00909 Ammonium Transporter Family EW093_06760 PF00990 Diguanylate cyclase, GGDEF domain EW093_06760 PF17158 Membrane-associated sensor, integral membrane domain EW093_06765 PF00528 Binding-protein-dependent transport system inner membrane component EW093_06770 PF00528 Binding-protein-dependent transport system inner membrane component EW093_06780 PF00356 Bacterial regulatory proteins, lacI family EW093_06785 PF00356 Bacterial regulatory proteins, lacI family EW093_06790 PF00722 Glycosyl hydrolases family 16 EW093_06830 PF00480 ROK family EW093_06840 PF00672 HAMP domain EW093_06840 PF02743 Cache domain EW093_06840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_06845 PF00512 His Kinase A (phospho-acceptor) domain EW093_06845 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_06845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_06860 PF01590 GAF domain EW093_06860 PF00990 Diguanylate cyclase, GGDEF domain EW093_06860 PF00360 Phytochrome region EW093_06860 PF00563 EAL domain EW093_06905 PF17131 Outer membrane lipoprotein-sorting protein EW093_06910 PF03176 MMPL family EW093_06925 PF08713 DNA alkylation repair enzyme EW093_06930 PF00581 Rhodanese-like domain EW093_06935 PF00586 AIR synthase related protein, N-terminal domain EW093_06935 PF02769 AIR synthase related protein, C-terminal domain EW093_06940 PF00106 short chain dehydrogenase EW093_06945 PF00465 Iron-containing alcohol dehydrogenase EW093_06950 PF13411 MerR HTH family regulatory protein EW093_06955 PF05167 Uncharacterised ACR (DUF711) EW093_06990 PF01165 Ribosomal protein S21 EW093_07000 PF00248 Aldo/keto reductase family EW093_07005 PF01055 Glycosyl hydrolases family 31 EW093_07005 PF13802 Galactose mutarotase-like EW093_07005 PF17137 Domain of unknown function (DUF5110) EW093_07005 PF16338 Domain of unknown function (DUF4968) EW093_07010 PF00528 Binding-protein-dependent transport system inner membrane component EW093_07015 PF00528 Binding-protein-dependent transport system inner membrane component EW093_07025 PF00356 Bacterial regulatory proteins, lacI family EW093_07030 PF00356 Bacterial regulatory proteins, lacI family EW093_07045 PF00528 Binding-protein-dependent transport system inner membrane component EW093_07050 PF00528 Binding-protein-dependent transport system inner membrane component EW093_07055 PF17385 Lacto-N-biose phosphorylase central domain EW093_07055 PF17386 Lacto-N-biose phosphorylase C-terminal domain EW093_07055 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain EW093_07060 PF07470 Glycosyl Hydrolase Family 88 EW093_07075 PF00330 Aconitase family (aconitate hydratase) EW093_07080 PF16916 Dimerisation domain of Zinc Transporter EW093_07080 PF01545 Cation efflux family EW093_07085 PF05193 Peptidase M16 inactive domain EW093_07085 PF00675 Insulinase (Peptidase family M16) EW093_07105 PF00211 Adenylate and Guanylate cyclase catalytic domain EW093_07115 PF00682 HMGL-like EW093_07115 PF00364 Biotin-requiring enzyme EW093_07115 PF02436 Conserved carboxylase domain EW093_07120 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EW093_07125 PF01699 Sodium/calcium exchanger protein EW093_07150 PF00501 AMP-binding enzyme EW093_07150 PF13193 AMP-binding enzyme C-terminal domain EW093_07160 PF07995 Glucose / Sorbosone dehydrogenase EW093_07165 PF03831 PhnA domain EW093_07165 PF08274 PhnA Zinc-Ribbon EW093_07170 PF04376 Arginine-tRNA-protein transferase, N terminus EW093_07170 PF04377 Arginine-tRNA-protein transferase, C terminus EW093_07175 PF12392 Collagenase EW093_07175 PF01136 Peptidase family U32 EW093_07180 PF01966 HD domain EW093_07185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EW093_07205 PF08668 HDOD domain EW093_07210 PF01784 NIF3 (NGG1p interacting factor 3) EW093_07215 PF01252 Signal peptidase (SPase) II EW093_07235 PF09334 tRNA synthetases class I (M) EW093_07235 PF00133 tRNA synthetases class I (I, L, M and V) EW093_07235 PF08264 Anticodon-binding domain of tRNA EW093_07235 PF13603 Leucyl-tRNA synthetase, Domain 2 EW093_07245 PF02673 Bacitracin resistance protein BacA EW093_07270 PF08447 PAS fold EW093_07270 PF08448 PAS fold EW093_07270 PF05231 MASE1 EW093_07270 PF00990 Diguanylate cyclase, GGDEF domain EW093_07270 PF13426 PAS domain EW093_07270 PF00563 EAL domain EW093_07285 PF09397 Ftsk gamma domain EW093_07285 PF01580 FtsK/SpoIIIE family EW093_07285 PF17854 FtsK alpha domain EW093_07300 PF02527 rRNA small subunit methyltransferase G EW093_07305 PF13932 GidA associated domain EW093_07305 PF01134 Glucose inhibited division protein A EW093_07310 PF10396 GTP-binding protein TrmE N-terminus EW093_07310 PF12631 MnmE helical domain EW093_07310 PF01926 50S ribosome-binding GTPase EW093_07330 PF02548 Ketopantoate hydroxymethyltransferase EW093_07335 PF02569 Pantoate-beta-alanine ligase EW093_07340 PF02441 Flavoprotein EW093_07345 PF04127 DNA / pantothenate metabolism flavoprotein EW093_07345 PF02441 Flavoprotein EW093_07350 PF03309 Type III pantothenate kinase EW093_07355 PF02590 Predicted SPOUT methyltransferase EW093_07360 PF01136 Peptidase family U32 EW093_07365 PF00404 Dockerin type I domain EW093_07365 PF02927 Cellulase N-terminal ig-like domain EW093_07365 PF00759 Glycosyl hydrolase family 9 EW093_07370 PF01636 Phosphotransferase enzyme family EW093_07375 PF03023 Lipid II flippase MurJ EW093_07380 PF01914 MarC family integral membrane protein EW093_07390 PF00072 Response regulator receiver domain EW093_07395 PF01066 CDP-alcohol phosphatidyltransferase EW093_07400 PF00486 Transcriptional regulatory protein, C terminal EW093_07400 PF00072 Response regulator receiver domain EW093_07405 PF00183 Hsp90 protein EW093_07410 PF03030 Inorganic H+ pyrophosphatase EW093_07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_07420 PF00512 His Kinase A (phospho-acceptor) domain EW093_07420 PF00989 PAS fold EW093_07425 PF00196 Bacterial regulatory proteins, luxR family EW093_07425 PF00072 Response regulator receiver domain EW093_07430 PF01595 Cyclin M transmembrane N-terminal domain EW093_07430 PF03471 Transporter associated domain EW093_07430 PF00571 CBS domain EW093_07435 PF03129 Anticodon binding domain EW093_07435 PF04073 Aminoacyl-tRNA editing domain EW093_07435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EW093_07440 PF01592 NifU-like N terminal domain EW093_07440 PF01106 NifU-like domain EW093_07440 PF04324 BFD-like [2Fe-2S] binding domain EW093_07445 PF00266 Aminotransferase class-V EW093_07450 PF02938 GAD domain EW093_07450 PF00152 tRNA synthetases class II (D, K and N) EW093_07450 PF01336 OB-fold nucleic acid binding domain EW093_07460 PF00885 6,7-dimethyl-8-ribityllumazine synthase EW093_07465 PF00925 GTP cyclohydrolase II EW093_07465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EW093_07470 PF00677 Lumazine binding domain EW093_07475 PF01872 RibD C-terminal domain EW093_07475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EW093_07485 PF00196 Bacterial regulatory proteins, luxR family EW093_07485 PF00072 Response regulator receiver domain EW093_07515 PF14319 Transposase zinc-binding domain EW093_07515 PF04986 Putative transposase EW093_07535 PF02899 Phage integrase, N-terminal SAM-like domain EW093_07535 PF00589 Phage integrase family EW093_07540 PF04986 Putative transposase EW093_07540 PF14319 Transposase zinc-binding domain EW093_07560 PF13817 IS66 C-terminal element EW093_07560 PF13005 zinc-finger binding domain of transposase IS66 EW093_07560 PF03050 Transposase IS66 family EW093_07560 PF13007 Transposase C of IS166 homeodomain EW093_07595 PF06971 Putative DNA-binding protein N-terminus EW093_07595 PF02629 CoA binding domain EW093_07600 PF00266 Aminotransferase class-V EW093_07605 PF01842 ACT domain EW093_07605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EW093_07605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EW093_07610 PF00106 short chain dehydrogenase EW093_07620 PF00462 Glutaredoxin EW093_07645 PF01300 Telomere recombination EW093_07650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_07650 PF12729 Four helix bundle sensory module for signal transduction EW093_07650 PF00672 HAMP domain EW093_07660 PF07690 Major Facilitator Superfamily EW093_07680 PF00158 Sigma-54 interaction domain EW093_07680 PF02954 Bacterial regulatory protein, Fis family EW093_07680 PF01590 GAF domain EW093_07685 PF00682 HMGL-like EW093_07695 PF02579 Dinitrogenase iron-molybdenum cofactor EW093_07695 PF04055 Radical SAM superfamily EW093_07700 PF00148 Nitrogenase component 1 type Oxidoreductase EW093_07705 PF00148 Nitrogenase component 1 type Oxidoreductase EW093_07735 PF00589 Phage integrase family EW093_07735 PF02899 Phage integrase, N-terminal SAM-like domain EW093_07745 PF00148 Nitrogenase component 1 type Oxidoreductase EW093_07750 PF00148 Nitrogenase component 1 type Oxidoreductase EW093_07760 PF00543 Nitrogen regulatory protein P-II EW093_07765 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family EW093_07785 PF00722 Glycosyl hydrolases family 16 EW093_07790 PF00722 Glycosyl hydrolases family 16 EW093_07795 PF00356 Bacterial regulatory proteins, lacI family EW093_07795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EW093_07815 PF00266 Aminotransferase class-V EW093_07825 PF00144 Beta-lactamase EW093_07830 PF09587 Bacterial capsule synthesis protein PGA_cap EW093_07835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_07835 PF00672 HAMP domain EW093_07835 PF02743 Cache domain EW093_07850 PF00005 ABC transporter EW093_07880 PF04986 Putative transposase EW093_07880 PF14319 Transposase zinc-binding domain EW093_07885 PF00589 Phage integrase family EW093_07885 PF13495 Phage integrase, N-terminal SAM-like domain EW093_07890 PF00392 Bacterial regulatory proteins, gntR family EW093_07890 PF00155 Aminotransferase class I and II EW093_07900 PF12704 MacB-like periplasmic core domain EW093_07900 PF02687 FtsX-like permease family EW093_07900 PF00005 ABC transporter EW093_07935 PF12704 MacB-like periplasmic core domain EW093_07935 PF00005 ABC transporter EW093_07935 PF02687 FtsX-like permease family EW093_07940 PF00440 Bacterial regulatory proteins, tetR family EW093_07940 PF16925 Tetracyclin repressor-like, C-terminal domain EW093_07945 PF00196 Bacterial regulatory proteins, luxR family EW093_07950 PF00144 Beta-lactamase EW093_07960 PF02574 Homocysteine S-methyltransferase EW093_07960 PF02219 Methylenetetrahydrofolate reductase EW093_07965 PF01502 Phosphoribosyl-AMP cyclohydrolase EW093_07965 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EW093_07970 PF00211 Adenylate and Guanylate cyclase catalytic domain EW093_07970 PF00672 HAMP domain EW093_07980 PF02743 Cache domain EW093_07980 PF00672 HAMP domain EW093_07980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_07990 PF00465 Iron-containing alcohol dehydrogenase EW093_07995 PF01515 Phosphate acetyl/butaryl transferase EW093_08000 PF01515 Phosphate acetyl/butaryl transferase EW093_08005 PF13476 AAA domain EW093_08010 PF00149 Calcineurin-like phosphoesterase EW093_08010 PF12320 Type 5 capsule protein repressor C-terminal domain EW093_08015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_08015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EW093_08015 PF01627 Hpt domain EW093_08015 PF00072 Response regulator receiver domain EW093_08015 PF00512 His Kinase A (phospho-acceptor) domain EW093_08015 PF00672 HAMP domain EW093_08025 PF02915 Rubrerythrin EW093_08030 PF02583 Metal-sensitive transcriptional repressor EW093_08040 PF00356 Bacterial regulatory proteins, lacI family EW093_08045 PF00528 Binding-protein-dependent transport system inner membrane component EW093_08050 PF00528 Binding-protein-dependent transport system inner membrane component EW093_08075 PF02810 SEC-C motif EW093_08085 PF00282 Pyridoxal-dependent decarboxylase conserved domain EW093_08095 PF00977 Histidine biosynthesis protein EW093_08100 PF00149 Calcineurin-like phosphoesterase EW093_08100 PF02872 5'-nucleotidase, C-terminal domain EW093_08110 PF01627 Hpt domain EW093_08110 PF00072 Response regulator receiver domain EW093_08110 PF00512 His Kinase A (phospho-acceptor) domain EW093_08110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_08110 PF00672 HAMP domain EW093_08110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EW093_08125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EW093_08130 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EW093_08130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EW093_08135 PF06745 KaiC EW093_08135 PF18073 Rubredoxin metal binding domain EW093_08155 PF00465 Iron-containing alcohol dehydrogenase EW093_08170 PF13732 Domain of unknown function (DUF4162) EW093_08170 PF00005 ABC transporter EW093_08190 PF05230 MASE2 domain EW093_08190 PF00990 Diguanylate cyclase, GGDEF domain EW093_08195 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EW093_08195 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EW093_08200 PF00890 FAD binding domain EW093_08200 PF02910 Fumarate reductase flavoprotein C-term EW093_08205 PF02445 Quinolinate synthetase A protein EW093_08250 PF00011 Hsp20/alpha crystallin family EW093_08260 PF07722 Peptidase C26 EW093_08265 PF00128 Alpha amylase, catalytic domain EW093_08265 PF02903 Alpha amylase, N-terminal ig-like domain EW093_08265 PF16657 Maltogenic Amylase, C-terminal domain EW093_08270 PF00440 Bacterial regulatory proteins, tetR family EW093_08270 PF18665 Tetracyclin repressor-like, C-terminal domain EW093_08275 PF00675 Insulinase (Peptidase family M16) EW093_08275 PF05193 Peptidase M16 inactive domain EW093_08285 PF13538 UvrD-like helicase C-terminal domain EW093_08290 PF13361 UvrD-like helicase C-terminal domain EW093_08290 PF00580 UvrD/REP helicase N-terminal domain EW093_08290 PF12705 PD-(D/E)XK nuclease superfamily EW093_08295 PF17946 RecC C-terminal domain EW093_08305 PF07228 Stage II sporulation protein E (SpoIIE) EW093_08305 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain EW093_08315 PF00501 AMP-binding enzyme EW093_08315 PF13193 AMP-binding enzyme C-terminal domain EW093_08315 PF00668 Condensation domain EW093_08315 PF00550 Phosphopantetheine attachment site EW093_08325 PF00512 His Kinase A (phospho-acceptor) domain EW093_08325 PF00672 HAMP domain EW093_08325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_08345 PF07308 Protein of unknown function (DUF1456) EW093_08365 PF00664 ABC transporter transmembrane region EW093_08365 PF00005 ABC transporter EW093_08370 PF00664 ABC transporter transmembrane region EW093_08370 PF00005 ABC transporter EW093_08385 PF02903 Alpha amylase, N-terminal ig-like domain EW093_08385 PF00128 Alpha amylase, catalytic domain EW093_08385 PF16657 Maltogenic Amylase, C-terminal domain EW093_08390 PF13276 HTH-like domain EW093_08390 PF13333 Integrase core domain EW093_08390 PF00665 Integrase core domain EW093_08405 PF09827 CRISPR associated protein Cas2 EW093_08410 PF01867 CRISPR associated protein Cas1 EW093_08415 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 EW093_08415 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 EW093_08415 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 EW093_08415 PF13395 HNH endonuclease EW093_08420 PF00672 HAMP domain EW093_08420 PF00909 Ammonium Transporter Family EW093_08430 PF00072 Response regulator receiver domain EW093_08440 PF02203 Tar ligand binding domain homologue EW093_08440 PF00672 HAMP domain EW093_08440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_08470 PF13193 AMP-binding enzyme C-terminal domain EW093_08470 PF00501 AMP-binding enzyme EW093_08475 PF02535 ZIP Zinc transporter EW093_08570 PF01381 Helix-turn-helix EW093_08575 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB EW093_08595 PF13005 zinc-finger binding domain of transposase IS66 EW093_08595 PF13817 IS66 C-terminal element EW093_08595 PF13007 Transposase C of IS166 homeodomain EW093_08595 PF03050 Transposase IS66 family EW093_08600 PF13344 Haloacid dehalogenase-like hydrolase EW093_08620 PF07669 Eco57I restriction-modification methylase EW093_08625 PF02384 N-6 DNA Methylase EW093_08630 PF02899 Phage integrase, N-terminal SAM-like domain EW093_08630 PF00589 Phage integrase family EW093_08640 PF00291 Pyridoxal-phosphate dependent enzyme EW093_08640 PF14821 Threonine synthase N terminus EW093_08645 PF00742 Homoserine dehydrogenase EW093_08645 PF01842 ACT domain EW093_08645 PF00696 Amino acid kinase family EW093_08645 PF13840 ACT domain EW093_08645 PF03447 Homoserine dehydrogenase, NAD binding domain EW093_08650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EW093_08670 PF01728 FtsJ-like methyltransferase EW093_08675 PF00348 Polyprenyl synthetase EW093_08680 PF14804 Jag N-terminus EW093_08680 PF01424 R3H domain EW093_08685 PF14849 YidC periplasmic domain EW093_08685 PF02096 60Kd inner membrane protein EW093_08695 PF00468 Ribosomal protein L34 EW093_08705 PF02463 RecF/RecN/SMC N terminal domain EW093_08710 PF02463 RecF/RecN/SMC N terminal domain EW093_08715 PF02768 DNA polymerase III beta subunit, C-terminal domain EW093_08715 PF02767 DNA polymerase III beta subunit, central domain EW093_08715 PF00712 DNA polymerase III beta subunit, N-terminal domain EW093_08720 PF00308 Bacterial dnaA protein EW093_08720 PF08299 Bacterial dnaA protein helix-turn-helix EW093_08720 PF11638 DnaA N-terminal domain EW093_08725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_08725 PF01751 Toprim domain EW093_08725 PF00204 DNA gyrase B EW093_08725 PF00986 DNA gyrase B subunit, carboxyl terminus EW093_08730 PF00521 DNA gyrase/topoisomerase IV, subunit A EW093_08730 PF03989 DNA gyrase C-terminal domain, beta-propeller EW093_08735 PF01106 NifU-like domain EW093_08735 PF01592 NifU-like N terminal domain EW093_08735 PF04324 BFD-like [2Fe-2S] binding domain EW093_08740 PF13614 AAA domain EW093_08745 PF17762 HTH domain found in ParB protein EW093_08745 PF02195 ParB-like nuclease domain EW093_08760 PF07726 ATPase family associated with various cellular activities (AAA) EW093_08760 PF17863 AAA lid domain EW093_08780 PF12169 DNA polymerase III subunits gamma and tau domain III EW093_08785 PF02575 YbaB/EbfC DNA-binding family EW093_08790 PF02132 RecR protein EW093_08790 PF13662 Toprim domain EW093_08800 PF01204 Trehalase EW093_08805 PF00768 D-alanyl-D-alanine carboxypeptidase EW093_08805 PF07943 Penicillin-binding protein 5, C-terminal domain EW093_08810 PF00072 Response regulator receiver domain EW093_08810 PF00486 Transcriptional regulatory protein, C terminal EW093_08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_08815 PF00672 HAMP domain EW093_08815 PF00512 His Kinase A (phospho-acceptor) domain EW093_08815 PF13426 PAS domain EW093_08820 PF00072 Response regulator receiver domain EW093_08820 PF00486 Transcriptional regulatory protein, C terminal EW093_08825 PF01145 SPFH domain / Band 7 family EW093_08830 PF01145 SPFH domain / Band 7 family EW093_08840 PF09186 Domain of unknown function (DUF1949) EW093_08840 PF01205 Uncharacterized protein family UPF0029 EW093_08855 PF01541 GIY-YIG catalytic domain EW093_08855 PF02151 UvrB/uvrC motif EW093_08855 PF08459 UvrC Helix-hairpin-helix N-terminal EW093_08865 PF01726 LexA DNA binding domain EW093_08865 PF00717 Peptidase S24-like EW093_08870 PF02954 Bacterial regulatory protein, Fis family EW093_08870 PF00072 Response regulator receiver domain EW093_08870 PF00158 Sigma-54 interaction domain EW093_08875 PF00512 His Kinase A (phospho-acceptor) domain EW093_08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_08875 PF00672 HAMP domain EW093_08880 PF00381 PTS HPr component phosphorylation site EW093_08885 PF02603 HPr Serine kinase N terminus EW093_08885 PF07475 HPr Serine kinase C-terminal domain EW093_08895 PF00309 Sigma-54 factor, Activator interacting domain (AID) EW093_08895 PF04963 Sigma-54 factor, core binding domain EW093_08895 PF04552 Sigma-54, DNA binding domain EW093_08900 PF00005 ABC transporter EW093_08900 PF12399 Branched-chain amino acid ATP-binding cassette transporter EW093_08920 PF01739 CheR methyltransferase, SAM binding domain EW093_08920 PF03705 CheR methyltransferase, all-alpha domain EW093_08925 PF00072 Response regulator receiver domain EW093_08925 PF01339 CheB methylesterase EW093_08945 PF02542 YgbB family EW093_08950 PF02559 CarD-like/TRCF domain EW093_08955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EW093_08960 PF00248 Aldo/keto reductase family EW093_08970 PF00793 DAHP synthetase I family EW093_08970 PF18152 DAHP synthase ferredoxin-like domain EW093_09000 PF00501 AMP-binding enzyme EW093_09000 PF13193 AMP-binding enzyme C-terminal domain EW093_09010 PF03853 YjeF-related protein N-terminus EW093_09010 PF01256 Carbohydrate kinase EW093_09030 PF04452 RNA methyltransferase EW093_09035 PF13180 PDZ domain EW093_09035 PF03572 Peptidase family S41 EW093_09040 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EW093_09050 PF01790 Prolipoprotein diacylglyceryl transferase EW093_09060 PF07885 Ion channel EW093_09060 PF02254 TrkA-N domain EW093_09095 PF00795 Carbon-nitrogen hydrolase EW093_09095 PF02540 NAD synthase EW093_09100 PF03485 Arginyl tRNA synthetase N terminal domain EW093_09100 PF05746 DALR anticodon binding domain EW093_09100 PF00750 tRNA synthetases class I (R) EW093_09110 PF00072 Response regulator receiver domain EW093_09110 PF00486 Transcriptional regulatory protein, C terminal EW093_09120 PF00282 Pyridoxal-dependent decarboxylase conserved domain EW093_09125 PF00202 Aminotransferase class-III EW093_09130 PF00005 ABC transporter EW093_09160 PF00679 Elongation factor G C-terminus EW093_09160 PF14492 Elongation Factor G, domain II EW093_09160 PF03764 Elongation factor G, domain IV EW093_09160 PF03144 Elongation factor Tu domain 2 EW093_09160 PF00009 Elongation factor Tu GTP binding domain EW093_09205 PF12729 Four helix bundle sensory module for signal transduction EW093_09205 PF00672 HAMP domain EW093_09205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_09215 PF01588 Putative tRNA binding domain EW093_09215 PF03147 Ferredoxin-fold anticodon binding domain EW093_09215 PF03484 tRNA synthetase B5 domain EW093_09215 PF03483 B3/4 domain EW093_09215 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EW093_09220 PF01409 tRNA synthetases class II core domain (F) EW093_09220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EW093_09235 PF17804 Tail specific protease N-terminal domain EW093_09235 PF03572 Peptidase family S41 EW093_09235 PF00595 PDZ domain EW093_09235 PF11818 C-terminal domain of tail specific protease (DUF3340) EW093_09255 PF16363 GDP-mannose 4,6 dehydratase EW093_09260 PF02698 DUF218 domain EW093_09265 PF00085 Thioredoxin EW093_09280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EW093_09300 PF00072 Response regulator receiver domain EW093_09300 PF00486 Transcriptional regulatory protein, C terminal EW093_09305 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EW093_09305 PF00072 Response regulator receiver domain EW093_09305 PF00512 His Kinase A (phospho-acceptor) domain EW093_09305 PF01627 Hpt domain EW093_09305 PF00672 HAMP domain EW093_09305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_09315 PF02743 Cache domain EW093_09315 PF00672 HAMP domain EW093_09315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_09320 PF03372 Endonuclease/Exonuclease/phosphatase family EW093_09330 PF00465 Iron-containing alcohol dehydrogenase EW093_09345 PF00528 Binding-protein-dependent transport system inner membrane component EW093_09345 PF12911 N-terminal TM domain of oligopeptide transport permease C EW093_09350 PF02653 Branched-chain amino acid transport system / permease component EW093_09355 PF00005 ABC transporter EW093_09360 PF13407 Periplasmic binding protein domain EW093_09365 PF13407 Periplasmic binding protein domain EW093_09370 PF06580 Histidine kinase EW093_09370 PF00672 HAMP domain EW093_09370 PF02743 Cache domain EW093_09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_09375 PF00072 Response regulator receiver domain EW093_09375 PF12833 Helix-turn-helix domain EW093_09385 PF02446 4-alpha-glucanotransferase EW093_09390 PF00990 Diguanylate cyclase, GGDEF domain EW093_09395 PF00586 AIR synthase related protein, N-terminal domain EW093_09395 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EW093_09395 PF02769 AIR synthase related protein, C-terminal domain EW093_09400 PF01551 Peptidase family M23 EW093_09405 PF04204 Homoserine O-succinyltransferase EW093_09410 PF06580 Histidine kinase EW093_09410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_09410 PF00672 HAMP domain EW093_09410 PF02743 Cache domain EW093_09415 PF00072 Response regulator receiver domain EW093_09415 PF12833 Helix-turn-helix domain EW093_09420 PF01547 Bacterial extracellular solute-binding protein EW093_09425 PF00528 Binding-protein-dependent transport system inner membrane component EW093_09430 PF00528 Binding-protein-dependent transport system inner membrane component EW093_09435 PF04055 Radical SAM superfamily EW093_09435 PF11842 Domain of unknown function (DUF3362) EW093_09435 PF08497 Radical SAM N-terminal EW093_09450 PF00136 DNA polymerase family B EW093_09450 PF03104 DNA polymerase family B, exonuclease domain EW093_09455 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EW093_09455 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EW093_09460 PF00072 Response regulator receiver domain EW093_09465 PF00005 ABC transporter EW093_09465 PF00664 ABC transporter transmembrane region EW093_09470 PF00005 ABC transporter EW093_09470 PF00664 ABC transporter transmembrane region EW093_09475 PF09308 LuxQ, periplasmic EW093_09475 PF00512 His Kinase A (phospho-acceptor) domain EW093_09475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_09475 PF00072 Response regulator receiver domain EW093_09480 PF01739 CheR methyltransferase, SAM binding domain EW093_09480 PF03705 CheR methyltransferase, all-alpha domain EW093_09485 PF01339 CheB methylesterase EW093_09490 PF00360 Phytochrome region EW093_09490 PF00563 EAL domain EW093_09490 PF01590 GAF domain EW093_09490 PF00990 Diguanylate cyclase, GGDEF domain EW093_09495 PF00950 ABC 3 transport family EW093_09500 PF00005 ABC transporter EW093_09525 PF12127 SigmaW regulon antibacterial EW093_09535 PF01972 Serine dehydrogenase proteinase EW093_09535 PF01957 NfeD-like C-terminal, partner-binding EW093_09540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EW093_09540 PF01872 RibD C-terminal domain EW093_09545 PF00989 PAS fold EW093_09545 PF00512 His Kinase A (phospho-acceptor) domain EW093_09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_09545 PF16736 Single Cache-like EW093_09555 PF12850 Calcineurin-like phosphoesterase superfamily domain EW093_09560 PF00440 Bacterial regulatory proteins, tetR family EW093_09565 PF01926 50S ribosome-binding GTPase EW093_09575 PF01979 Amidohydrolase family EW093_09580 PF10576 Iron-sulfur binding domain of endonuclease III EW093_09580 PF00633 Helix-hairpin-helix motif EW093_09580 PF00730 HhH-GPD superfamily base excision DNA repair protein EW093_09585 PF17202 Single cache domain 3 EW093_09585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_09585 PF00672 HAMP domain EW093_09595 PF05698 Bacterial trigger factor protein (TF) C-terminus EW093_09600 PF00072 Response regulator receiver domain EW093_09600 PF00486 Transcriptional regulatory protein, C terminal EW093_09610 PF00005 ABC transporter EW093_09615 PF12399 Branched-chain amino acid ATP-binding cassette transporter EW093_09615 PF00005 ABC transporter EW093_09620 PF11862 Domain of unknown function (DUF3382) EW093_09620 PF02653 Branched-chain amino acid transport system / permease component EW093_09625 PF02653 Branched-chain amino acid transport system / permease component EW093_09630 PF13458 Periplasmic binding protein EW093_09635 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_09645 PF05698 Bacterial trigger factor protein (TF) C-terminus EW093_09650 PF00491 Arginase family EW093_09660 PF03313 Serine dehydratase alpha chain EW093_09670 PF01751 Toprim domain EW093_09670 PF01131 DNA topoisomerase EW093_09680 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B EW093_09680 PF00175 Oxidoreductase NAD-binding domain EW093_09685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EW093_09685 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_09690 PF13302 Acetyltransferase (GNAT) domain EW093_09695 PF10417 C-terminal domain of 1-Cys peroxiredoxin EW093_09695 PF00578 AhpC/TSA family EW093_09705 PF00005 ABC transporter EW093_09710 PF01458 Uncharacterized protein family (UPF0051) EW093_09715 PF00266 Aminotransferase class-V EW093_09720 PF02657 Fe-S metabolism associated domain EW093_09725 PF01883 Iron-sulfur cluster assembly protein EW093_09730 PF02592 Putative vitamin uptake transporter EW093_09740 PF00226 DnaJ domain EW093_09740 PF05099 Tellurite resistance protein TerB EW093_09745 PF07703 Alpha-2-macroglobulin bait region domain EW093_09745 PF00207 Alpha-2-macroglobulin family EW093_09745 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain EW093_09745 PF01835 MG2 domain EW093_09745 PF07678 A-macroglobulin TED domain EW093_09750 PF00912 Transglycosylase EW093_09750 PF06832 Penicillin-Binding Protein C-terminus Family EW093_09750 PF00905 Penicillin binding protein transpeptidase domain EW093_09760 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_09765 PF00528 Binding-protein-dependent transport system inner membrane component EW093_09770 PF00528 Binding-protein-dependent transport system inner membrane component EW093_09775 PF00005 ABC transporter EW093_09785 PF00696 Amino acid kinase family EW093_09785 PF00583 Acetyltransferase (GNAT) family EW093_09805 PF03358 NADPH-dependent FMN reductase EW093_09820 PF16123 Hydroxyacylglutathione hydrolase C-terminus EW093_09820 PF00753 Metallo-beta-lactamase superfamily EW093_09825 PF02683 Cytochrome C biogenesis protein transmembrane region EW093_09830 PF00578 AhpC/TSA family EW093_09840 PF03330 Lytic transglycolase EW093_09840 PF05036 Sporulation related domain EW093_09845 PF01921 tRNA synthetases class I (K) EW093_09855 PF00128 Alpha amylase, catalytic domain EW093_09860 PF01553 Acyltransferase EW093_09865 PF01926 50S ribosome-binding GTPase EW093_09865 PF07650 KH domain EW093_09870 PF00574 Clp protease EW093_09875 PF01259 SAICAR synthetase EW093_09890 PF01960 ArgJ family EW093_09910 PF00092 von Willebrand factor type A domain EW093_09915 PF00092 von Willebrand factor type A domain EW093_09915 PF07584 Aerotolerance regulator N-terminal EW093_09935 PF01176 Translation initiation factor 1A / IF-1 EW093_09950 PF00753 Metallo-beta-lactamase superfamily EW093_09960 PF03880 DbpA RNA binding domain EW093_09980 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EW093_10000 PF00005 ABC transporter EW093_10005 PF02608 ABC transporter substrate-binding protein PnrA-like EW093_10035 PF00842 Alanine racemase, C-terminal domain EW093_10035 PF01168 Alanine racemase, N-terminal domain EW093_10040 PF11849 Domain of unknown function (DUF3369) EW093_10045 PF00072 Response regulator receiver domain EW093_10045 PF00486 Transcriptional regulatory protein, C terminal EW093_10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_10050 PF00512 His Kinase A (phospho-acceptor) domain EW093_10050 PF16736 Single Cache-like EW093_10050 PF00989 PAS fold EW093_10060 PF00480 ROK family EW093_10060 PF01047 MarR family EW093_10070 PF00365 Phosphofructokinase EW093_10080 PF17151 Periplasmic sensor domain EW093_10080 PF00990 Diguanylate cyclase, GGDEF domain EW093_10120 PF00293 NUDIX domain EW093_10120 PF09297 NADH pyrophosphatase zinc ribbon domain EW093_10120 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EW093_10140 PF04055 Radical SAM superfamily EW093_10145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_10145 PF12729 Four helix bundle sensory module for signal transduction EW093_10145 PF00672 HAMP domain EW093_10150 PF01266 FAD dependent oxidoreductase EW093_10150 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EW093_10155 PF01966 HD domain EW093_10155 PF00013 KH domain EW093_10155 PF12072 Domain of unknown function (DUF3552) EW093_10160 PF13277 YmdB-like protein EW093_10165 PF01728 FtsJ-like methyltransferase EW093_10165 PF01479 S4 domain EW093_10185 PF07963 Prokaryotic N-terminal methylation motif EW093_10185 PF08334 Type II secretion system (T2SS), protein G EW093_10205 PF00482 Type II secretion system (T2SS), protein F EW093_10210 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EW093_10210 PF00437 Type II/IV secretion system protein EW093_10215 PF00263 Bacterial type II and III secretion system protein EW093_10215 PF03958 Bacterial type II/III secretion system short domain EW093_10220 PF04754 Putative transposase, YhgA-like EW093_10230 PF00375 Sodium:dicarboxylate symporter family EW093_10235 PF06968 Biotin and Thiamin Synthesis associated domain EW093_10235 PF04055 Radical SAM superfamily EW093_10240 PF06968 Biotin and Thiamin Synthesis associated domain EW093_10240 PF04055 Radical SAM superfamily EW093_10250 PF10415 Fumarase C C-terminus EW093_10250 PF00206 Lyase EW093_10255 PF10396 GTP-binding protein TrmE N-terminus EW093_10255 PF12631 MnmE helical domain EW093_10255 PF01926 50S ribosome-binding GTPase EW093_10260 PF00356 Bacterial regulatory proteins, lacI family EW093_10260 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EW093_10270 PF01380 SIS domain EW093_10275 PF16124 RecQ zinc-binding EW093_10275 PF00570 HRDC domain EW093_10275 PF00271 Helicase conserved C-terminal domain EW093_10275 PF00270 DEAD/DEAH box helicase EW093_10275 PF09382 RQC domain EW093_10280 PF10502 Signal peptidase, peptidase S26 EW093_10285 PF06165 Glycosyltransferase family 36 EW093_10285 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EW093_10295 PF12801 4Fe-4S binding domain EW093_10300 PF00682 HMGL-like EW093_10310 PF12849 PBP superfamily domain EW093_10315 PF00528 Binding-protein-dependent transport system inner membrane component EW093_10320 PF00528 Binding-protein-dependent transport system inner membrane component EW093_10325 PF00005 ABC transporter EW093_10330 PF01895 PhoU domain EW093_10335 PF00990 Diguanylate cyclase, GGDEF domain EW093_10335 PF03707 Bacterial signalling protein N terminal repeat EW093_10335 PF00563 EAL domain EW093_10345 PF00005 ABC transporter EW093_10355 PF00005 ABC transporter EW093_10355 PF02687 FtsX-like permease family EW093_10355 PF12704 MacB-like periplasmic core domain EW093_10365 PF00563 EAL domain EW093_10365 PF00990 Diguanylate cyclase, GGDEF domain EW093_10365 PF03707 Bacterial signalling protein N terminal repeat EW093_10375 PF00294 pfkB family carbohydrate kinase EW093_10380 PF01081 KDPG and KHG aldolase EW093_10400 PF00672 HAMP domain EW093_10400 PF00512 His Kinase A (phospho-acceptor) domain EW093_10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_10405 PF00072 Response regulator receiver domain EW093_10405 PF00486 Transcriptional regulatory protein, C terminal EW093_10425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_10425 PF00672 HAMP domain EW093_10425 PF07730 Histidine kinase EW093_10430 PF00072 Response regulator receiver domain EW093_10430 PF00196 Bacterial regulatory proteins, luxR family EW093_10440 PF00528 Binding-protein-dependent transport system inner membrane component EW093_10445 PF00528 Binding-protein-dependent transport system inner membrane component EW093_10460 PF02872 5'-nucleotidase, C-terminal domain EW093_10460 PF00149 Calcineurin-like phosphoesterase EW093_10465 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EW093_10465 PF00072 Response regulator receiver domain EW093_10465 PF00512 His Kinase A (phospho-acceptor) domain EW093_10465 PF01627 Hpt domain EW093_10465 PF00672 HAMP domain EW093_10465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_10470 PF00480 ROK family EW093_10470 PF01325 Iron dependent repressor, N-terminal DNA binding domain EW093_10475 PF00480 ROK family EW093_10490 PF01212 Beta-eliminating lyase EW093_10495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EW093_10505 PF00535 Glycosyl transferase family 2 EW093_10510 PF01979 Amidohydrolase family EW093_10515 PF07687 Peptidase dimerisation domain EW093_10515 PF01546 Peptidase family M20/M25/M40 EW093_10520 PF16591 Helical bimodular sensor domain EW093_10520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_10520 PF00672 HAMP domain EW093_10540 PF03631 Virulence factor BrkB EW093_10545 PF00211 Adenylate and Guanylate cyclase catalytic domain EW093_10555 PF00005 ABC transporter EW093_10555 PF13732 Domain of unknown function (DUF4162) EW093_10560 PF11799 impB/mucB/samB family C-terminal domain EW093_10560 PF00817 impB/mucB/samB family EW093_10560 PF13438 Domain of unknown function (DUF4113) EW093_10565 PF00717 Peptidase S24-like EW093_10570 PF07730 Histidine kinase EW093_10570 PF05384 Sensor protein DegS EW093_10570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_10575 PF00196 Bacterial regulatory proteins, luxR family EW093_10575 PF00072 Response regulator receiver domain EW093_10580 PF00773 RNB domain EW093_10590 PF01894 Uncharacterised protein family UPF0047 EW093_10600 PF00206 Lyase EW093_10605 PF02690 Na+/Pi-cotransporter EW093_10610 PF14572 Phosphoribosyl synthetase-associated domain EW093_10610 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EW093_10620 PF00471 Ribosomal protein L33 EW093_10635 PF02357 Transcription termination factor nusG EW093_10635 PF00467 KOW motif EW093_10640 PF00298 Ribosomal protein L11, RNA binding domain EW093_10640 PF03946 Ribosomal protein L11, N-terminal domain EW093_10645 PF00687 Ribosomal protein L1p/L10e family EW093_10650 PF00466 Ribosomal protein L10 EW093_10655 PF16320 Ribosomal protein L7/L12 dimerisation domain EW093_10655 PF00542 Ribosomal protein L7/L12 C-terminal domain EW093_10660 PF04560 RNA polymerase Rpb2, domain 7 EW093_10660 PF04561 RNA polymerase Rpb2, domain 2 EW093_10660 PF00562 RNA polymerase Rpb2, domain 6 EW093_10660 PF10385 RNA polymerase beta subunit external 1 domain EW093_10660 PF04563 RNA polymerase beta subunit EW093_10660 PF04565 RNA polymerase Rpb2, domain 3 EW093_10665 PF05000 RNA polymerase Rpb1, domain 4 EW093_10665 PF04997 RNA polymerase Rpb1, domain 1 EW093_10665 PF00623 RNA polymerase Rpb1, domain 2 EW093_10665 PF04983 RNA polymerase Rpb1, domain 3 EW093_10665 PF04998 RNA polymerase Rpb1, domain 5 EW093_10675 PF00177 Ribosomal protein S7p/S5e EW093_10680 PF00009 Elongation factor Tu GTP binding domain EW093_10680 PF03143 Elongation factor Tu C-terminal domain EW093_10680 PF03144 Elongation factor Tu domain 2 EW093_10685 PF00338 Ribosomal protein S10p/S20e EW093_10690 PF00297 Ribosomal protein L3 EW093_10695 PF00573 Ribosomal protein L4/L1 family EW093_10700 PF00276 Ribosomal protein L23 EW093_10705 PF00181 Ribosomal Proteins L2, RNA binding domain EW093_10705 PF03947 Ribosomal Proteins L2, C-terminal domain EW093_10710 PF00203 Ribosomal protein S19 EW093_10715 PF00237 Ribosomal protein L22p/L17e EW093_10720 PF00189 Ribosomal protein S3, C-terminal domain EW093_10720 PF07650 KH domain EW093_10725 PF00252 Ribosomal protein L16p/L10e EW093_10730 PF00831 Ribosomal L29 protein EW093_10735 PF00366 Ribosomal protein S17 EW093_10740 PF00238 Ribosomal protein L14p/L23e EW093_10745 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EW093_10745 PF00467 KOW motif EW093_10750 PF00281 Ribosomal protein L5 EW093_10750 PF00673 ribosomal L5P family C-terminus EW093_10755 PF00253 Ribosomal protein S14p/S29e EW093_10760 PF00410 Ribosomal protein S8 EW093_10765 PF00347 Ribosomal protein L6 EW093_10770 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EW093_10775 PF00333 Ribosomal protein S5, N-terminal domain EW093_10775 PF03719 Ribosomal protein S5, C-terminal domain EW093_10780 PF00327 Ribosomal protein L30p/L7e EW093_10785 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EW093_10790 PF00344 SecY translocase EW093_10795 PF00444 Ribosomal protein L36 EW093_10800 PF00416 Ribosomal protein S13/S18 EW093_10805 PF00411 Ribosomal protein S11 EW093_10810 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EW093_10810 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EW093_10810 PF01000 RNA polymerase Rpb3/RpoA insert domain EW093_10815 PF01196 Ribosomal protein L17 EW093_10835 PF00795 Carbon-nitrogen hydrolase EW093_10845 PF02954 Bacterial regulatory protein, Fis family EW093_10845 PF00158 Sigma-54 interaction domain EW093_10850 PF04012 PspA/IM30 family EW093_10855 PF04012 PspA/IM30 family EW093_10870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EW093_10870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EW093_10870 PF02824 TGS domain EW093_10870 PF03129 Anticodon binding domain EW093_10885 PF13407 Periplasmic binding protein domain EW093_10890 PF02653 Branched-chain amino acid transport system / permease component EW093_10895 PF00005 ABC transporter EW093_10900 PF05025 RbsD / FucU transport protein family EW093_10905 PF00356 Bacterial regulatory proteins, lacI family EW093_10905 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EW093_10910 PF00294 pfkB family carbohydrate kinase EW093_10925 PF13419 Haloacid dehalogenase-like hydrolase EW093_10950 PF01420 Type I restriction modification DNA specificity domain EW093_10965 PF13333 Integrase core domain EW093_10965 PF00665 Integrase core domain EW093_10965 PF13276 HTH-like domain EW093_10970 PF01527 Transposase EW093_10975 PF03063 Prismane/CO dehydrogenase family EW093_11020 PF00005 ABC transporter EW093_11030 PF00392 Bacterial regulatory proteins, gntR family EW093_11040 PF01966 HD domain EW093_11040 PF00072 Response regulator receiver domain EW093_11060 PF02127 Aminopeptidase I zinc metalloprotease (M18) EW093_11070 PF01343 Peptidase family S49 EW093_11075 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EW093_11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_11085 PF00072 Response regulator receiver domain EW093_11090 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EW093_11090 PF00749 tRNA synthetases class I (E and Q), catalytic domain EW093_11095 PF01037 Lrp/AsnC ligand binding domain EW093_11110 PF07690 Major Facilitator Superfamily EW093_11115 PF01171 PP-loop family EW093_11120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EW093_11120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EW093_11130 PF01272 Transcription elongation factor, GreA/GreB, C-term EW093_11130 PF03449 Transcription elongation factor, N-terminal EW093_11150 PF00593 TonB dependent receptor EW093_11150 PF07715 TonB-dependent Receptor Plug Domain EW093_11165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EW093_11165 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_11170 PF17746 SfsA N-terminal OB domain EW093_11170 PF03749 Sugar fermentation stimulation protein RE domain EW093_11185 PF00291 Pyridoxal-phosphate dependent enzyme EW093_11190 PF01053 Cys/Met metabolism PLP-dependent enzyme EW093_11195 PF02608 ABC transporter substrate-binding protein PnrA-like EW093_11200 PF03063 Prismane/CO dehydrogenase family EW093_11215 PF00990 Diguanylate cyclase, GGDEF domain EW093_11225 PF13302 Acetyltransferase (GNAT) domain EW093_11235 PF01966 HD domain EW093_11235 PF00672 HAMP domain EW093_11240 PF00085 Thioredoxin EW093_11295 PF07238 PilZ domain EW093_11300 PF12729 Four helix bundle sensory module for signal transduction EW093_11300 PF00672 HAMP domain EW093_11300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_11310 PF01554 MatE EW093_11315 PF03466 LysR substrate binding domain EW093_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EW093_11320 PF00933 Glycosyl hydrolase family 3 N terminal domain EW093_11320 PF01915 Glycosyl hydrolase family 3 C-terminal domain EW093_11320 PF14310 Fibronectin type III-like domain EW093_11325 PF03275 UDP-galactopyranose mutase EW093_11330 PF00933 Glycosyl hydrolase family 3 N terminal domain EW093_11335 PF01915 Glycosyl hydrolase family 3 C-terminal domain EW093_11335 PF14310 Fibronectin type III-like domain EW093_11335 PF00933 Glycosyl hydrolase family 3 N terminal domain EW093_11340 PF00535 Glycosyl transferase family 2 EW093_11345 PF01915 Glycosyl hydrolase family 3 C-terminal domain EW093_11345 PF00933 Glycosyl hydrolase family 3 N terminal domain EW093_11345 PF14310 Fibronectin type III-like domain EW093_11355 PF02142 MGS-like domain EW093_11365 PF01544 CorA-like Mg2+ transporter protein EW093_11375 PF00990 Diguanylate cyclase, GGDEF domain EW093_11380 PF00005 ABC transporter EW093_11380 PF00664 ABC transporter transmembrane region EW093_11385 PF00005 ABC transporter EW093_11385 PF00664 ABC transporter transmembrane region EW093_11395 PF01915 Glycosyl hydrolase family 3 C-terminal domain EW093_11395 PF14310 Fibronectin type III-like domain EW093_11395 PF00933 Glycosyl hydrolase family 3 N terminal domain EW093_11400 PF03009 Glycerophosphoryl diester phosphodiesterase family EW093_11405 PF00575 S1 RNA binding domain EW093_11405 PF02401 LytB protein EW093_11410 PF02660 Glycerol-3-phosphate acyltransferase EW093_11430 PF02645 Uncharacterised protein, DegV family COG1307 EW093_11440 PF00924 Mechanosensitive ion channel EW093_11440 PF05552 Conserved TM helix EW093_11445 PF02080 TrkA-C domain EW093_11445 PF02254 TrkA-N domain EW093_11455 PF01613 Flavin reductase like domain EW093_11455 PF00301 Rubredoxin EW093_11460 PF03601 Conserved hypothetical protein 698 EW093_11465 PF03466 LysR substrate binding domain EW093_11465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EW093_11470 PF00563 EAL domain EW093_11475 PF01595 Cyclin M transmembrane N-terminal domain EW093_11475 PF03471 Transporter associated domain EW093_11475 PF00571 CBS domain EW093_11480 PF00563 EAL domain EW093_11480 PF03707 Bacterial signalling protein N terminal repeat EW093_11480 PF00990 Diguanylate cyclase, GGDEF domain EW093_11500 PF03061 Thioesterase superfamily EW093_11505 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EW093_11505 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EW093_11510 PF00072 Response regulator receiver domain EW093_11510 PF00196 Bacterial regulatory proteins, luxR family EW093_11520 PF00209 Sodium:neurotransmitter symporter family EW093_11525 PF13520 Amino acid permease EW093_11550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_11550 PF02743 Cache domain EW093_11550 PF00672 HAMP domain EW093_11580 PF00005 ABC transporter EW093_11585 PF01032 FecCD transport family EW093_11590 PF01032 FecCD transport family EW093_11615 PF01554 MatE EW093_11630 PF00245 Alkaline phosphatase EW093_11645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EW093_11645 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_11690 PF13276 HTH-like domain EW093_11690 PF00665 Integrase core domain EW093_11690 PF13333 Integrase core domain EW093_11720 PF03063 Prismane/CO dehydrogenase family EW093_11750 PF02492 CobW/HypB/UreG, nucleotide-binding domain EW093_11755 PF00005 ABC transporter EW093_11770 PF00440 Bacterial regulatory proteins, tetR family EW093_11770 PF08359 YsiA-like protein, C-terminal region EW093_11780 PF12146 Serine aminopeptidase, S33 EW093_11785 PF18146 Damage-inducible protein CinA KH domain EW093_11785 PF00994 Probable molybdopterin binding domain EW093_11785 PF02464 Competence-damaged protein EW093_11795 PF02082 Transcriptional regulator EW093_11805 PF00933 Glycosyl hydrolase family 3 N terminal domain EW093_11805 PF01915 Glycosyl hydrolase family 3 C-terminal domain EW093_11820 PF14602 Hexapeptide repeat of succinyl-transferase EW093_11820 PF00132 Bacterial transferase hexapeptide (six repeats) EW093_11820 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EW093_11825 PF00155 Aminotransferase class I and II EW093_11830 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EW093_11830 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EW093_11835 PF01546 Peptidase family M20/M25/M40 EW093_11835 PF07687 Peptidase dimerisation domain EW093_11840 PF00871 Acetokinase family EW093_11855 PF12146 Serine aminopeptidase, S33 EW093_11860 PF00696 Amino acid kinase family EW093_11875 PF04055 Radical SAM superfamily EW093_11875 PF00919 Uncharacterized protein family UPF0004 EW093_11875 PF18693 TRAM domain EW093_11880 PF00580 UvrD/REP helicase N-terminal domain EW093_11880 PF13361 UvrD-like helicase C-terminal domain EW093_11895 PF00128 Alpha amylase, catalytic domain EW093_11900 PF00572 Ribosomal protein L13 EW093_11905 PF00380 Ribosomal protein S9/S16 EW093_11920 PF00708 Acylphosphatase EW093_11930 PF03807 NADP oxidoreductase coenzyme F420-dependent EW093_11930 PF14748 Pyrroline-5-carboxylate reductase dimerisation EW093_11935 PF01145 SPFH domain / Band 7 family EW093_11940 PF01145 SPFH domain / Band 7 family EW093_11945 PF09334 tRNA synthetases class I (M) EW093_11945 PF01588 Putative tRNA binding domain EW093_11955 PF00672 HAMP domain EW093_11955 PF02203 Tar ligand binding domain homologue EW093_11955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_11965 PF03636 Glycosyl hydrolase family 65, N-terminal domain EW093_11965 PF03632 Glycosyl hydrolase family 65 central catalytic domain EW093_11965 PF03633 Glycosyl hydrolase family 65, C-terminal domain EW093_11970 PF13419 Haloacid dehalogenase-like hydrolase EW093_11975 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EW093_11975 PF00356 Bacterial regulatory proteins, lacI family EW093_11980 PF01226 Formate/nitrite transporter EW093_11985 PF11849 Domain of unknown function (DUF3369) EW093_11990 PF00512 His Kinase A (phospho-acceptor) domain EW093_11990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_11990 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_11995 PF00849 RNA pseudouridylate synthase EW093_11995 PF01479 S4 domain EW093_12000 PF03649 Uncharacterised protein family (UPF0014) EW093_12005 PF00005 ABC transporter EW093_12010 PF00920 Dehydratase family EW093_12015 PF13419 Haloacid dehalogenase-like hydrolase EW093_12020 PF01479 S4 domain EW093_12020 PF00163 Ribosomal protein S4/S9 N-terminal domain EW093_12030 PF03824 High-affinity nickel-transport protein EW093_12035 PF01136 Peptidase family U32 EW093_12035 PF16325 Peptidase family U32 C-terminal domain EW093_12045 PF00005 ABC transporter EW093_12090 PF01553 Acyltransferase EW093_12090 PF00501 AMP-binding enzyme EW093_12095 PF04002 RadC-like JAB domain EW093_12105 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_12105 PF00512 His Kinase A (phospho-acceptor) domain EW093_12105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_12120 PF00892 EamA-like transporter family EW093_12125 PF03952 Enolase, N-terminal domain EW093_12125 PF00113 Enolase, C-terminal TIM barrel domain EW093_12130 PF03129 Anticodon binding domain EW093_12130 PF04073 Aminoacyl-tRNA editing domain EW093_12130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EW093_12135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EW093_12135 PF03129 Anticodon binding domain EW093_12135 PF04073 Aminoacyl-tRNA editing domain EW093_12150 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EW093_12155 PF01850 PIN domain EW093_12175 PF01063 Amino-transferase class IV EW093_12195 PF00436 Single-strand binding protein family EW093_12200 PF13635 Domain of unknown function (DUF4143) EW093_12200 PF13173 AAA domain EW093_12210 PF08443 RimK-like ATP-grasp domain EW093_12210 PF18030 RimK PreATP-grasp domain EW093_12235 PF00343 Carbohydrate phosphorylase EW093_12240 PF01842 ACT domain EW093_12240 PF03447 Homoserine dehydrogenase, NAD binding domain EW093_12240 PF00742 Homoserine dehydrogenase EW093_12250 PF00005 ABC transporter EW093_12250 PF03459 TOBE domain EW093_12250 PF17912 MalK OB fold domain EW093_12260 PF00583 Acetyltransferase (GNAT) family EW093_12260 PF04055 Radical SAM superfamily EW093_12260 PF16199 Radical_SAM C-terminal domain EW093_12280 PF01926 50S ribosome-binding GTPase EW093_12280 PF16360 GTP-binding GTPase Middle Region EW093_12280 PF13167 GTP-binding GTPase N-terminal EW093_12285 PF00171 Aldehyde dehydrogenase family EW093_12285 PF00465 Iron-containing alcohol dehydrogenase EW093_12290 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EW093_12295 PF01264 Chorismate synthase EW093_12300 PF01202 Shikimate kinase EW093_12310 PF00990 Diguanylate cyclase, GGDEF domain EW093_12310 PF08448 PAS fold EW093_12310 PF00563 EAL domain EW093_12330 PF08245 Mur ligase middle domain EW093_12355 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EW093_12355 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EW093_12365 PF01037 Lrp/AsnC ligand binding domain EW093_12375 PF00356 Bacterial regulatory proteins, lacI family EW093_12385 PF16363 GDP-mannose 4,6 dehydratase EW093_12390 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EW093_12390 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EW093_12405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EW093_12405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EW093_12405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EW093_12405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EW093_12410 PF16314 Domain of unknown function (DUF4954) EW093_12420 PF02403 Seryl-tRNA synthetase N-terminal domain EW093_12420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EW093_12430 PF00270 DEAD/DEAH box helicase EW093_12430 PF00271 Helicase conserved C-terminal domain EW093_12440 PF01725 Ham1 family EW093_12460 PF00512 His Kinase A (phospho-acceptor) domain EW093_12460 PF02743 Cache domain EW093_12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_12465 PF01869 BadF/BadG/BcrA/BcrD ATPase family EW093_12475 PF11700 Vacuole effluxer Atg22 like EW093_12480 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_12480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EW093_12495 PF00728 Glycosyl hydrolase family 20, catalytic domain EW093_12495 PF02838 Glycosyl hydrolase family 20, domain 2 EW093_12495 PF07691 PA14 domain EW093_12510 PF01751 Toprim domain EW093_12510 PF01396 Topoisomerase DNA binding C4 zinc finger EW093_12510 PF01131 DNA topoisomerase EW093_12510 PF08272 Topoisomerase I zinc-ribbon-like EW093_12515 PF00990 Diguanylate cyclase, GGDEF domain EW093_12515 PF00563 EAL domain EW093_12515 PF03707 Bacterial signalling protein N terminal repeat EW093_12520 PF01434 Peptidase family M41 EW093_12520 PF17862 AAA+ lid domain EW093_12520 PF00004 ATPase family associated with various cellular activities (AAA) EW093_12540 PF14748 Pyrroline-5-carboxylate reductase dimerisation EW093_12540 PF03807 NADP oxidoreductase coenzyme F420-dependent EW093_12545 PF00171 Aldehyde dehydrogenase family EW093_12550 PF00696 Amino acid kinase family EW093_12560 PF02082 Transcriptional regulator EW093_12565 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EW093_12565 PF01433 Peptidase family M1 domain EW093_12565 PF11940 Domain of unknown function (DUF3458) Ig-like fold EW093_12580 PF02875 Mur ligase family, glutamate ligase domain EW093_12580 PF08245 Mur ligase middle domain EW093_12590 PF00072 Response regulator receiver domain EW093_12595 PF04055 Radical SAM superfamily EW093_12610 PF03477 ATP cone domain EW093_12620 PF00881 Nitroreductase family EW093_12635 PF01435 Peptidase family M48 EW093_12635 PF16491 CAAX prenyl protease N-terminal, five membrane helices EW093_12645 PF03167 Uracil DNA glycosylase superfamily EW093_12650 PF00106 short chain dehydrogenase EW093_12665 PF02371 Transposase IS116/IS110/IS902 family EW093_12665 PF01548 Transposase EW093_12675 PF10282 Lactonase, 7-bladed beta-propeller EW093_12680 PF12833 Helix-turn-helix domain EW093_12695 PF00294 pfkB family carbohydrate kinase EW093_12700 PF17820 PDZ domain EW093_12700 PF13180 PDZ domain EW093_12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_12705 PF00989 PAS fold EW093_12705 PF16736 Single Cache-like EW093_12705 PF00512 His Kinase A (phospho-acceptor) domain EW093_12710 PF00072 Response regulator receiver domain EW093_12710 PF00486 Transcriptional regulatory protein, C terminal EW093_12715 PF03466 LysR substrate binding domain EW093_12715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EW093_12720 PF02361 Cobalt transport protein EW093_12725 PF00005 ABC transporter EW093_12730 PF02632 BioY family EW093_12735 PF02237 Biotin protein ligase C terminal domain EW093_12735 PF08279 HTH domain EW093_12735 PF03099 Biotin/lipoate A/B protein ligase family EW093_12745 PF00072 Response regulator receiver domain EW093_12745 PF00486 Transcriptional regulatory protein, C terminal EW093_12765 PF08011 PD-(D/E)XK nuclease superfamily EW093_12765 PF09820 Predicted AAA-ATPase EW093_12770 PF09820 Predicted AAA-ATPase EW093_12770 PF08011 PD-(D/E)XK nuclease superfamily EW093_12775 PF09820 Predicted AAA-ATPase EW093_12775 PF08011 PD-(D/E)XK nuclease superfamily EW093_12780 PF08011 PD-(D/E)XK nuclease superfamily EW093_12780 PF09820 Predicted AAA-ATPase EW093_12785 PF09820 Predicted AAA-ATPase EW093_12785 PF08011 PD-(D/E)XK nuclease superfamily EW093_12790 PF08191 LRR adjacent EW093_12790 PF13855 Leucine rich repeat EW093_12790 PF12799 Leucine Rich repeats (2 copies) EW093_12790 PF12354 Bacterial adhesion/invasion protein N terminal EW093_12790 PF13457 GW (Gly-Tryp) dipeptide domain EW093_12790 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) EW093_12795 PF07581 The GLUG motif EW093_12795 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) EW093_12815 PF00501 AMP-binding enzyme EW093_12820 PF05362 Lon protease (S16) C-terminal proteolytic domain EW093_12820 PF02190 ATP-dependent protease La (LON) substrate-binding domain EW093_12820 PF00004 ATPase family associated with various cellular activities (AAA) EW093_12830 PF01368 DHH family EW093_12830 PF17768 RecJ OB domain EW093_12830 PF10141 Single-strand DNA-specific exonuclease, C terminal domain EW093_12830 PF02272 DHHA1 domain EW093_12835 PF01551 Peptidase family M23 EW093_12840 PF01165 Ribosomal protein S21 EW093_12850 PF05193 Peptidase M16 inactive domain EW093_12850 PF08367 Peptidase M16C associated EW093_12850 PF00675 Insulinase (Peptidase family M16) EW093_12875 PF02779 Transketolase, pyrimidine binding domain EW093_12875 PF00456 Transketolase, thiamine diphosphate binding domain EW093_12895 PF00871 Acetokinase family EW093_12900 PF02719 Polysaccharide biosynthesis protein EW093_12905 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EW093_12910 PF00204 DNA gyrase B EW093_12910 PF01751 Toprim domain EW093_12910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_12910 PF00986 DNA gyrase B subunit, carboxyl terminus EW093_12915 PF00521 DNA gyrase/topoisomerase IV, subunit A EW093_12920 PF00027 Cyclic nucleotide-binding domain EW093_12920 PF00005 ABC transporter EW093_12925 PF02457 DisA bacterial checkpoint controller nucleotide-binding EW093_12935 PF01648 4'-phosphopantetheinyl transferase superfamily EW093_12940 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) EW093_12945 PF01416 tRNA pseudouridine synthase EW093_12955 PF18074 Primosomal protein N C-terminal domain EW093_12955 PF17764 3′ DNA-binding domain (3′BD) EW093_12955 PF00271 Helicase conserved C-terminal domain EW093_12955 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EW093_12955 PF00270 DEAD/DEAH box helicase EW093_12965 PF02743 Cache domain EW093_12965 PF00211 Adenylate and Guanylate cyclase catalytic domain EW093_12965 PF00672 HAMP domain EW093_12995 PF00176 SNF2 family N-terminal domain EW093_12995 PF00271 Helicase conserved C-terminal domain EW093_12995 PF12419 SNF2 Helicase protein EW093_13010 PF08011 PD-(D/E)XK nuclease superfamily EW093_13010 PF09820 Predicted AAA-ATPase EW093_13055 PF09820 Predicted AAA-ATPase EW093_13055 PF08011 PD-(D/E)XK nuclease superfamily EW093_13125 PF00534 Glycosyl transferases group 1 EW093_13125 PF13439 Glycosyltransferase Family 4 EW093_13160 PF08485 Polysaccharide biosynthesis protein C-terminal EW093_13160 PF02719 Polysaccharide biosynthesis protein EW093_13165 PF01370 NAD dependent epimerase/dehydratase family EW093_13170 PF02350 UDP-N-acetylglucosamine 2-epimerase EW093_13180 PF00483 Nucleotidyl transferase EW093_13185 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EW093_13190 PF04321 RmlD substrate binding domain EW093_13195 PF16363 GDP-mannose 4,6 dehydratase EW093_13200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EW093_13200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EW093_13205 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EW093_13205 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EW093_13205 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EW093_13210 PF02350 UDP-N-acetylglucosamine 2-epimerase EW093_13215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EW093_13220 PF00132 Bacterial transferase hexapeptide (six repeats) EW093_13225 PF00483 Nucleotidyl transferase EW093_13225 PF01050 Mannose-6-phosphate isomerase EW093_13240 PF01050 Mannose-6-phosphate isomerase EW093_13240 PF00483 Nucleotidyl transferase EW093_13330 PF08011 PD-(D/E)XK nuclease superfamily EW093_13330 PF09820 Predicted AAA-ATPase EW093_13345 PF08011 PD-(D/E)XK nuclease superfamily EW093_13345 PF09820 Predicted AAA-ATPase EW093_13355 PF03050 Transposase IS66 family EW093_13355 PF13007 Transposase C of IS166 homeodomain EW093_13355 PF13817 IS66 C-terminal element EW093_13355 PF13005 zinc-finger binding domain of transposase IS66 EW093_13375 PF00483 Nucleotidyl transferase EW093_13375 PF01050 Mannose-6-phosphate isomerase EW093_13385 PF09820 Predicted AAA-ATPase EW093_13385 PF08011 PD-(D/E)XK nuclease superfamily EW093_13400 PF01043 SecA preprotein cross-linking domain EW093_13400 PF07516 SecA Wing and Scaffold domain EW093_13400 PF07517 SecA DEAD-like domain EW093_13400 PF02810 SEC-C motif EW093_13405 PF02743 Cache domain EW093_13405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_13405 PF00672 HAMP domain EW093_13410 PF08447 PAS fold EW093_13410 PF13426 PAS domain EW093_13410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_13420 PF00953 Glycosyl transferase family 4 EW093_13430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EW093_13430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EW093_13435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EW093_13435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EW093_13435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EW093_13440 PF02350 UDP-N-acetylglucosamine 2-epimerase EW093_13445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EW093_13460 PF02397 Bacterial sugar transferase EW093_13475 PF00534 Glycosyl transferases group 1 EW093_13475 PF13439 Glycosyltransferase Family 4 EW093_13485 PF00534 Glycosyl transferases group 1 EW093_13485 PF13439 Glycosyltransferase Family 4 EW093_13505 PF00132 Bacterial transferase hexapeptide (six repeats) EW093_13510 PF08645 Polynucleotide kinase 3 phosphatase EW093_13515 PF13580 SIS domain EW093_13520 PF00294 pfkB family carbohydrate kinase EW093_13520 PF01467 Cytidylyltransferase-like EW093_13525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EW093_13540 PF00535 Glycosyl transferase family 2 EW093_13550 PF00534 Glycosyl transferases group 1 EW093_13550 PF13439 Glycosyltransferase Family 4 EW093_13560 PF01761 3-dehydroquinate synthase EW093_13565 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EW093_13565 PF00271 Helicase conserved C-terminal domain EW093_13565 PF04408 Helicase associated domain (HA2) EW093_13565 PF00270 DEAD/DEAH box helicase EW093_13570 PF00672 HAMP domain EW093_13570 PF00211 Adenylate and Guanylate cyclase catalytic domain EW093_13570 PF02743 Cache domain EW093_13580 PF01156 Inosine-uridine preferring nucleoside hydrolase EW093_13585 PF02562 PhoH-like protein EW093_13585 PF13638 PIN domain EW093_13605 PF01612 3'-5' exonuclease EW093_13605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EW093_13605 PF01367 5'-3' exonuclease, C-terminal SAM fold EW093_13605 PF00476 DNA polymerase family A EW093_13610 PF01121 Dephospho-CoA kinase EW093_13620 PF00072 Response regulator receiver domain EW093_13625 PF00132 Bacterial transferase hexapeptide (six repeats) EW093_13630 PF07729 FCD domain EW093_13630 PF00392 Bacterial regulatory proteins, gntR family EW093_13635 PF03786 D-mannonate dehydratase (UxuA) EW093_13640 PF08125 Mannitol dehydrogenase C-terminal domain EW093_13640 PF01232 Mannitol dehydrogenase Rossmann domain EW093_13645 PF04055 Radical SAM superfamily EW093_13645 PF12544 Lysine-2,3-aminomutase EW093_13655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EW093_13655 PF02811 PHP domain EW093_13655 PF01336 OB-fold nucleic acid binding domain EW093_13655 PF14579 Helix-hairpin-helix motif EW093_13655 PF07733 Bacterial DNA polymerase III alpha NTPase domain EW093_13700 PF00398 Ribosomal RNA adenine dimethylase EW093_13705 PF00701 Dihydrodipicolinate synthetase family EW093_13710 PF01113 Dihydrodipicolinate reductase, N-terminus EW093_13710 PF05173 Dihydrodipicolinate reductase, C-terminus EW093_13715 PF01515 Phosphate acetyl/butaryl transferase EW093_13795 PF05191 Adenylate kinase, active site lid EW093_13840 PF01926 50S ribosome-binding GTPase EW093_13855 PF00390 Malic enzyme, N-terminal domain EW093_13855 PF03949 Malic enzyme, NAD binding domain EW093_13865 PF02615 Malate/L-lactate dehydrogenase EW093_13870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EW093_13870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EW093_13890 PF00814 Glycoprotease family EW093_13895 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EW093_13915 PF07195 Flagellar hook-associated protein 2 C-terminus EW093_13915 PF02465 Flagellar hook-associated protein 2 N-terminus EW093_13925 PF02371 Transposase IS116/IS110/IS902 family EW093_13925 PF01548 Transposase EW093_13930 PF00669 Bacterial flagellin N-terminal helical region EW093_13930 PF00700 Bacterial flagellin C-terminal helical region EW093_13935 PF00669 Bacterial flagellin N-terminal helical region EW093_13935 PF00700 Bacterial flagellin C-terminal helical region EW093_13970 PF00453 Ribosomal protein L20 EW093_13975 PF01632 Ribosomal protein L35 EW093_13980 PF00707 Translation initiation factor IF-3, C-terminal domain EW093_13980 PF05198 Translation initiation factor IF-3, N-terminal domain EW093_13995 PF04620 Flagellar filament outer layer protein Flaa EW093_14005 PF01026 TatD related DNase EW093_14030 PF01551 Peptidase family M23 EW093_14030 PF01476 LysM domain EW093_14035 PF04545 Sigma-70, region 4 EW093_14035 PF04539 Sigma-70 region 3 EW093_14035 PF00140 Sigma-70 factor, region 1.2 EW093_14035 PF04542 Sigma-70 region 2 EW093_14065 PF02810 SEC-C motif EW093_14065 PF07517 SecA DEAD-like domain EW093_14065 PF07516 SecA Wing and Scaffold domain EW093_14065 PF01043 SecA preprotein cross-linking domain EW093_14075 PF02629 CoA binding domain EW093_14075 PF06971 Putative DNA-binding protein N-terminus EW093_14080 PF05958 tRNA (Uracil-5-)-methyltransferase EW093_14105 PF01168 Alanine racemase, N-terminal domain EW093_14115 PF00849 RNA pseudouridylate synthase EW093_14120 PF16123 Hydroxyacylglutathione hydrolase C-terminus EW093_14120 PF00753 Metallo-beta-lactamase superfamily EW093_14130 PF01177 Asp/Glu/Hydantoin racemase EW093_14135 PF03193 RsgA GTPase EW093_14150 PF02887 Pyruvate kinase, alpha/beta domain EW093_14150 PF00224 Pyruvate kinase, barrel domain EW093_14170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EW093_14170 PF16886 ATPsynthase alpha/beta subunit N-term extension EW093_14170 PF02874 ATP synthase alpha/beta family, beta-barrel domain EW093_14175 PF02874 ATP synthase alpha/beta family, beta-barrel domain EW093_14175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EW093_14180 PF01813 ATP synthase subunit D EW093_14200 PF03449 Transcription elongation factor, N-terminal EW093_14200 PF01272 Transcription elongation factor, GreA/GreB, C-term EW093_14210 PF00834 Ribulose-phosphate 3 epimerase family EW093_14230 PF02580 D-Tyr-tRNA(Tyr) deacylase EW093_14235 PF00154 recA bacterial DNA recombination protein EW093_14240 PF12848 ABC transporter EW093_14240 PF00005 ABC transporter EW093_14240 PF16326 ABC transporter C-terminal domain EW093_14250 PF00485 Phosphoribulokinase / Uridine kinase family EW093_14255 PF00534 Glycosyl transferases group 1 EW093_14255 PF08323 Starch synthase catalytic domain EW093_14265 PF01915 Glycosyl hydrolase family 3 C-terminal domain EW093_14265 PF00933 Glycosyl hydrolase family 3 N terminal domain EW093_14275 PF07196 Flagellin hook IN motif EW093_14275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EW093_14280 PF00669 Bacterial flagellin N-terminal helical region EW093_14280 PF00700 Bacterial flagellin C-terminal helical region EW093_14280 PF07196 Flagellin hook IN motif EW093_14285 PF02623 FliW protein EW093_14290 PF02599 Global regulator protein family EW093_14320 PF12437 Glutamine synthetase type III N terminal EW093_14320 PF18318 Glutamine synthetase C-terminal domain EW093_14320 PF00120 Glutamine synthetase, catalytic domain EW093_14330 PF00543 Nitrogen regulatory protein P-II EW093_14335 PF00909 Ammonium Transporter Family EW093_14350 PF00905 Penicillin binding protein transpeptidase domain EW093_14350 PF03717 Penicillin-binding Protein dimerisation domain EW093_14350 PF03793 PASTA domain EW093_14365 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EW093_14365 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EW093_14380 PF17763 Glutaminase/Asparaginase C-terminal domain EW093_14380 PF00710 Asparaginase, N-terminal EW093_14390 PF00929 Exonuclease EW093_14390 PF04851 Type III restriction enzyme, res subunit EW093_14390 PF13307 Helicase C-terminal domain EW093_14400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EW093_14400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EW093_14420 PF01553 Acyltransferase EW093_14435 PF04551 GcpE protein EW093_14445 PF17760 UvrA interaction domain EW093_14445 PF17755 UvrA DNA-binding domain EW093_14455 PF01966 HD domain EW093_14455 PF07697 7TM-HD extracellular EW093_14455 PF07698 7TM receptor with intracellular HD hydrolase EW093_14460 PF02130 Uncharacterized protein family UPF0054 EW093_14465 PF00571 CBS domain EW093_14465 PF03471 Transporter associated domain EW093_14475 PF00162 Phosphoglycerate kinase EW093_14480 PF00121 Triosephosphate isomerase EW093_14495 PF09312 SurA N-terminal domain EW093_14495 PF00639 PPIC-type PPIASE domain EW093_14500 PF01029 NusB family EW093_14510 PF00595 PDZ domain EW093_14510 PF13180 PDZ domain EW093_14515 PF00156 Phosphoribosyl transferase domain EW093_14520 PF01964 Radical SAM ThiC family EW093_14525 PF02581 Thiamine monophosphate synthase EW093_14530 PF00899 ThiF family EW093_14540 PF05690 Thiazole biosynthesis protein ThiG EW093_14550 PF01070 FMN-dependent dehydrogenase EW093_14570 PF01467 Cytidylyltransferase-like EW093_14575 PF01783 Ribosomal L32p protein family EW093_14580 PF00550 Phosphopantetheine attachment site EW093_14585 PF00035 Double-stranded RNA binding motif EW093_14585 PF14622 Ribonuclease-III-like EW093_14590 PF01743 Poly A polymerase head domain EW093_14590 PF13735 tRNA nucleotidyltransferase domain 2 putative EW093_14590 PF12627 Probable RNA and SrmB- binding site of polymerase A EW093_14615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EW093_14620 PF00528 Binding-protein-dependent transport system inner membrane component EW093_14625 PF00528 Binding-protein-dependent transport system inner membrane component EW093_14625 PF12911 N-terminal TM domain of oligopeptide transport permease C EW093_14630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EW093_14630 PF00005 ABC transporter EW093_14635 PF00005 ABC transporter EW093_14635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EW093_14650 PF07736 Chorismate mutase type I EW093_14655 PF00534 Glycosyl transferases group 1 EW093_14655 PF08323 Starch synthase catalytic domain EW093_14660 PF00557 Metallopeptidase family M24 EW093_14710 PF08275 DNA primase catalytic core, N-terminal domain EW093_14710 PF01807 CHC2 zinc finger EW093_14715 PF04542 Sigma-70 region 2 EW093_14715 PF03979 Sigma-70 factor, region 1.1 EW093_14715 PF00140 Sigma-70 factor, region 1.2 EW093_14715 PF04539 Sigma-70 region 3 EW093_14715 PF04545 Sigma-70, region 4 EW093_14750 PF03717 Penicillin-binding Protein dimerisation domain EW093_14750 PF00905 Penicillin binding protein transpeptidase domain EW093_14755 PF01098 Cell cycle protein EW093_14765 PF09905 DNA-binding protein VF530 EW093_14775 PF03358 NADPH-dependent FMN reductase EW093_14775 PF04205 FMN-binding domain EW093_14775 PF00890 FAD binding domain EW093_14795 PF02574 Homocysteine S-methyltransferase EW093_14795 PF02219 Methylenetetrahydrofolate reductase EW093_14805 PF03883 Peroxide stress protein YaaA EW093_14810 PF03960 ArsC family EW093_14815 PF16326 ABC transporter C-terminal domain EW093_14815 PF12848 ABC transporter EW093_14815 PF00005 ABC transporter EW093_14820 PF00672 HAMP domain EW093_14820 PF17202 Single cache domain 3 EW093_14820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_14825 PF02074 Carboxypeptidase Taq (M32) metallopeptidase EW093_14840 PF00933 Glycosyl hydrolase family 3 N terminal domain EW093_14840 PF01915 Glycosyl hydrolase family 3 C-terminal domain EW093_14850 PF00072 Response regulator receiver domain EW093_14850 PF00486 Transcriptional regulatory protein, C terminal EW093_14855 PF00672 HAMP domain EW093_14855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_14855 PF00512 His Kinase A (phospho-acceptor) domain EW093_14880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_14880 PF00512 His Kinase A (phospho-acceptor) domain EW093_14885 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_14885 PF01464 Transglycosylase SLT domain EW093_14890 PF00144 Beta-lactamase EW093_14905 PF02001 Protein of unknown function DUF134 EW093_14910 PF18267 Rubredoxin NAD+ reductase C-terminal domain EW093_14910 PF04324 BFD-like [2Fe-2S] binding domain EW093_14910 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EW093_14910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EW093_14910 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_14915 PF00226 DnaJ domain EW093_14915 PF05099 Tellurite resistance protein TerB EW093_14920 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EW093_14920 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EW093_14950 PF02875 Mur ligase family, glutamate ligase domain EW093_14950 PF08245 Mur ligase middle domain EW093_14950 PF01225 Mur ligase family, catalytic domain EW093_14955 PF08340 Domain of unknown function (DUF1732) EW093_14955 PF03755 YicC-like family, N-terminal region EW093_14975 PF02780 Transketolase, C-terminal domain EW093_14975 PF02779 Transketolase, pyrimidine binding domain EW093_14975 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EW093_14990 PF01966 HD domain EW093_14990 PF00072 Response regulator receiver domain EW093_14995 PF00155 Aminotransferase class I and II EW093_15000 PF00749 tRNA synthetases class I (E and Q), catalytic domain EW093_15005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EW093_15005 PF03129 Anticodon binding domain EW093_15010 PF00579 tRNA synthetases class I (W and Y) EW093_15020 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_15055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_15055 PF00672 HAMP domain EW093_15055 PF02743 Cache domain EW093_15060 PF03459 TOBE domain EW093_15060 PF00005 ABC transporter EW093_15065 PF00528 Binding-protein-dependent transport system inner membrane component EW093_15075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EW093_15085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_15085 PF00672 HAMP domain EW093_15085 PF02203 Tar ligand binding domain homologue EW093_15095 PF08359 YsiA-like protein, C-terminal region EW093_15095 PF00440 Bacterial regulatory proteins, tetR family EW093_15115 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EW093_15115 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EW093_15125 PF02677 Epoxyqueuosine reductase QueH EW093_15130 PF01261 Xylose isomerase-like TIM barrel EW093_15140 PF07694 5TMR of 5TMR-LYT EW093_15140 PF00990 Diguanylate cyclase, GGDEF domain EW093_15145 PF13597 Anaerobic ribonucleoside-triphosphate reductase EW093_15145 PF03477 ATP cone domain EW093_15175 PF00356 Bacterial regulatory proteins, lacI family EW093_15180 PF00356 Bacterial regulatory proteins, lacI family EW093_15195 PF02203 Tar ligand binding domain homologue EW093_15195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_15195 PF00672 HAMP domain EW093_15200 PF00694 Aconitase C-terminal domain EW093_15205 PF00330 Aconitase family (aconitate hydratase) EW093_15215 PF13180 PDZ domain EW093_15220 PF13361 UvrD-like helicase C-terminal domain EW093_15220 PF00580 UvrD/REP helicase N-terminal domain EW093_15235 PF00425 chorismate binding enzyme EW093_15235 PF04715 Anthranilate synthase component I, N terminal region EW093_15240 PF00591 Glycosyl transferase family, a/b domain EW093_15240 PF02885 Glycosyl transferase family, helical bundle domain EW093_15240 PF00117 Glutamine amidotransferase class-I EW093_15245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EW093_15245 PF00460 Flagella basal body rod protein EW093_15250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EW093_15250 PF00460 Flagella basal body rod protein EW093_15260 PF00905 Penicillin binding protein transpeptidase domain EW093_15260 PF00912 Transglycosylase EW093_15260 PF17092 Penicillin-binding protein OB-like domain EW093_15270 PF02608 ABC transporter substrate-binding protein PnrA-like EW093_15275 PF00005 ABC transporter EW093_15280 PF02653 Branched-chain amino acid transport system / permease component EW093_15290 PF02608 ABC transporter substrate-binding protein PnrA-like EW093_15295 PF00860 Permease family EW093_15310 PF00989 PAS fold EW093_15310 PF00512 His Kinase A (phospho-acceptor) domain EW093_15310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_15310 PF00672 HAMP domain EW093_15315 PF01116 Fructose-bisphosphate aldolase class-II EW093_15320 PF08525 Opacity-associated protein A N-terminal motif EW093_15320 PF01551 Peptidase family M23 EW093_15320 PF01476 LysM domain EW093_15325 PF00005 ABC transporter EW093_15330 PF01032 FecCD transport family EW093_15335 PF01497 Periplasmic binding protein EW093_15340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EW093_15355 PF02021 Uncharacterised protein family UPF0102 EW093_15365 PF00128 Alpha amylase, catalytic domain EW093_15365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EW093_15390 PF01228 Glycine radical EW093_15390 PF02901 Pyruvate formate lyase-like EW093_15400 PF03963 Flagellar hook capping protein - N-terminal region EW093_15405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EW093_15405 PF07559 Flagellar basal body protein FlaE EW093_15405 PF00460 Flagella basal body rod protein EW093_15415 PF01618 MotA/TolQ/ExbB proton channel family EW093_15420 PF13677 Membrane MotB of proton-channel complex MotA/MotB EW093_15420 PF00691 OmpA family EW093_15430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EW093_15430 PF02154 Flagellar motor switch protein FliM EW093_15435 PF04509 CheC-like family EW093_15435 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EW093_15445 PF00813 FliP family EW093_15450 PF01313 Bacterial export proteins, family 3 EW093_15460 PF01311 Bacterial export proteins, family 1 EW093_15465 PF01312 FlhB HrpN YscU SpaS Family EW093_15475 PF00448 SRP54-type protein, GTPase domain EW093_15480 PF10609 NUBPL iron-transfer P-loop NTPase EW093_15490 PF04539 Sigma-70 region 3 EW093_15490 PF04542 Sigma-70 region 2 EW093_15490 PF04545 Sigma-70, region 4 EW093_15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_15510 PF02895 Signal transducing histidine kinase, homodimeric domain EW093_15510 PF01584 CheW-like domain EW093_15510 PF01627 Hpt domain EW093_15510 PF07194 P2 response regulator binding domain EW093_15520 PF01493 GXGXG motif EW093_15520 PF01645 Conserved region in glutamate synthase EW093_15520 PF04898 Glutamate synthase central domain EW093_15520 PF00310 Glutamine amidotransferases class-II EW093_15525 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EW093_15525 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_15530 PF11849 Domain of unknown function (DUF3369) EW093_15555 PF00438 S-adenosylmethionine synthetase, N-terminal domain EW093_15555 PF02772 S-adenosylmethionine synthetase, central domain EW093_15555 PF02773 S-adenosylmethionine synthetase, C-terminal domain EW093_15570 PF17757 UvrB interaction domain EW093_15570 PF03461 TRCF domain EW093_15570 PF02559 CarD-like/TRCF domain EW093_15570 PF00271 Helicase conserved C-terminal domain EW093_15570 PF00270 DEAD/DEAH box helicase EW093_15575 PF02390 Putative methyltransferase EW093_15580 PF00285 Citrate synthase, C-terminal domain EW093_15590 PF00575 S1 RNA binding domain EW093_15590 PF16921 Tex protein YqgF-like domain EW093_15590 PF17674 HHH domain EW093_15590 PF09371 Tex-like protein N-terminal domain EW093_15620 PF13495 Phage integrase, N-terminal SAM-like domain EW093_15620 PF00589 Phage integrase family EW093_15645 PF01554 MatE EW093_15655 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EW093_15655 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EW093_15660 PF00334 Nucleoside diphosphate kinase EW093_15680 PF00533 BRCA1 C Terminus (BRCT) domain EW093_15680 PF03120 NAD-dependent DNA ligase OB-fold domain EW093_15680 PF01653 NAD-dependent DNA ligase adenylation domain EW093_15685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_15685 PF00072 Response regulator receiver domain EW093_15685 PF09308 LuxQ, periplasmic EW093_15685 PF00512 His Kinase A (phospho-acceptor) domain EW093_15690 PF04055 Radical SAM superfamily EW093_15720 PF04715 Anthranilate synthase component I, N terminal region EW093_15720 PF00425 chorismate binding enzyme EW093_15725 PF00117 Glutamine amidotransferase class-I EW093_15725 PF02885 Glycosyl transferase family, helical bundle domain EW093_15725 PF00591 Glycosyl transferase family, a/b domain EW093_15730 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EW093_15730 PF00218 Indole-3-glycerol phosphate synthase EW093_15735 PF00291 Pyridoxal-phosphate dependent enzyme EW093_15740 PF00290 Tryptophan synthase alpha chain EW093_15750 PF00990 Diguanylate cyclase, GGDEF domain EW093_15750 PF00563 EAL domain EW093_15750 PF08447 PAS fold EW093_15750 PF08448 PAS fold EW093_15750 PF13426 PAS domain EW093_15750 PF05231 MASE1 EW093_15760 PF03481 Putative GTP-binding controlling metal-binding EW093_15760 PF01300 Telomere recombination EW093_15765 PF02222 ATP-grasp domain EW093_15765 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EW093_15770 PF00731 AIR carboxylase EW093_15775 PF13393 Histidyl-tRNA synthetase EW093_15790 PF10672 S-adenosylmethionine-dependent methyltransferase EW093_15790 PF01170 Putative RNA methylase family UPF0020 EW093_15790 PF02926 THUMP domain EW093_15810 PF00475 Imidazoleglycerol-phosphate dehydratase EW093_15815 PF01634 ATP phosphoribosyltransferase EW093_15820 PF13393 Histidyl-tRNA synthetase EW093_15825 PF01476 LysM domain EW093_15825 PF00704 Glycosyl hydrolases family 18 EW093_15840 PF00270 DEAD/DEAH box helicase EW093_15840 PF00271 Helicase conserved C-terminal domain EW093_15840 PF17191 RecG wedge domain EW093_15855 PF01668 SmpB protein EW093_15865 PF10502 Signal peptidase, peptidase S26 EW093_15870 PF10502 Signal peptidase, peptidase S26 EW093_15875 PF04055 Radical SAM superfamily EW093_15875 PF06969 HemN C-terminal domain EW093_15885 PF03006 Haemolysin-III related EW093_15890 PF08411 Exonuclease C-terminal EW093_15890 PF00929 Exonuclease EW093_15900 PF02895 Signal transducing histidine kinase, homodimeric domain EW093_15900 PF01584 CheW-like domain EW093_15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_15900 PF07194 P2 response regulator binding domain EW093_15900 PF01627 Hpt domain EW093_15905 PF01584 CheW-like domain EW093_15915 PF00072 Response regulator receiver domain EW093_15920 PF01048 Phosphorylase superfamily EW093_15925 PF01502 Phosphoribosyl-AMP cyclohydrolase EW093_15940 PF01250 Ribosomal protein S6 EW093_15945 PF00436 Single-strand binding protein family EW093_15950 PF01084 Ribosomal protein S18 EW093_15955 PF03948 Ribosomal protein L9, C-terminal domain EW093_15955 PF01281 Ribosomal protein L9, N-terminal domain EW093_15960 PF00772 DnaB-like helicase N terminal domain EW093_15960 PF03796 DnaB-like helicase C terminal domain EW093_15985 PF00365 Phosphofructokinase EW093_16000 PF17820 PDZ domain EW093_16000 PF02163 Peptidase family M50 EW093_16005 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EW093_16005 PF13288 DXP reductoisomerase C-terminal domain EW093_16005 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EW093_16015 PF01255 Putative undecaprenyl diphosphate synthase EW093_16020 PF01765 Ribosome recycling factor EW093_16025 PF00889 Elongation factor TS EW093_16030 PF00318 Ribosomal protein S2 EW093_16035 PF02545 Maf-like protein EW093_16055 PF13519 von Willebrand factor type A domain EW093_16055 PF07584 Aerotolerance regulator N-terminal EW093_16065 PF01882 Protein of unknown function DUF58 EW093_16070 PF17863 AAA lid domain EW093_16070 PF07726 ATPase family associated with various cellular activities (AAA) EW093_16085 PF01048 Phosphorylase superfamily EW093_16090 PF02653 Branched-chain amino acid transport system / permease component EW093_16095 PF02653 Branched-chain amino acid transport system / permease component EW093_16100 PF00005 ABC transporter EW093_16110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EW093_16115 PF01676 Metalloenzyme superfamily EW093_16120 PF01791 DeoC/LacD family aldolase EW093_16125 PF00962 Adenosine/AMP deaminase EW093_16130 PF02885 Glycosyl transferase family, helical bundle domain EW093_16130 PF00591 Glycosyl transferase family, a/b domain EW093_16130 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EW093_16135 PF00356 Bacterial regulatory proteins, lacI family EW093_16140 PF00271 Helicase conserved C-terminal domain EW093_16140 PF00270 DEAD/DEAH box helicase EW093_16160 PF00005 ABC transporter EW093_16160 PF08402 TOBE domain EW093_16165 PF00528 Binding-protein-dependent transport system inner membrane component EW093_16170 PF01547 Bacterial extracellular solute-binding protein EW093_16200 PF01551 Peptidase family M23 EW093_16210 PF02811 PHP domain EW093_16220 PF13302 Acetyltransferase (GNAT) domain EW093_16220 PF00027 Cyclic nucleotide-binding domain EW093_16240 PF01808 AICARFT/IMPCHase bienzyme EW093_16240 PF02142 MGS-like domain EW093_16245 PF02142 MGS-like domain EW093_16245 PF01808 AICARFT/IMPCHase bienzyme EW093_16260 PF18381 YcaO cyclodehydratase C-terminal domain EW093_16260 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding EW093_16265 PF03819 MazG nucleotide pyrophosphohydrolase domain EW093_16275 PF00478 IMP dehydrogenase / GMP reductase domain EW093_16275 PF00571 CBS domain EW093_16280 PF00709 Adenylosuccinate synthetase EW093_16285 PF00117 Glutamine amidotransferase class-I EW093_16285 PF02540 NAD synthase EW093_16285 PF00958 GMP synthase C terminal domain EW093_16300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EW093_16300 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_16305 PF00268 Ribonucleotide reductase, small chain EW093_16310 PF03477 ATP cone domain EW093_16310 PF02867 Ribonucleotide reductase, barrel domain EW093_16310 PF00317 Ribonucleotide reductase, all-alpha domain EW093_16315 PF10417 C-terminal domain of 1-Cys peroxiredoxin EW093_16315 PF00578 AhpC/TSA family EW093_16320 PF00258 Flavodoxin EW093_16320 PF00753 Metallo-beta-lactamase superfamily EW093_16320 PF00301 Rubredoxin EW093_16325 PF00578 AhpC/TSA family EW093_16330 PF01880 Desulfoferrodoxin EW093_16330 PF06397 Desulfoferrodoxin, N-terminal domain EW093_16335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EW093_16335 PF07992 Pyridine nucleotide-disulphide oxidoreductase EW093_16340 PF10397 Adenylosuccinate lyase C-terminus EW093_16340 PF00206 Lyase EW093_16345 PF01432 Peptidase family M3 EW093_16360 PF00196 Bacterial regulatory proteins, luxR family EW093_16360 PF00072 Response regulator receiver domain EW093_16365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EW093_16370 PF00528 Binding-protein-dependent transport system inner membrane component EW093_16375 PF12911 N-terminal TM domain of oligopeptide transport permease C EW093_16375 PF00528 Binding-protein-dependent transport system inner membrane component EW093_16380 PF00005 ABC transporter EW093_16380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EW093_16385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EW093_16385 PF00005 ABC transporter EW093_16405 PF00291 Pyridoxal-phosphate dependent enzyme EW093_16410 PF00483 Nucleotidyl transferase EW093_16415 PF00682 HMGL-like EW093_16415 PF08502 LeuA allosteric (dimerisation) domain EW093_16420 PF00829 Ribosomal prokaryotic L21 protein EW093_16430 PF01016 Ribosomal L27 protein EW093_16435 PF01926 50S ribosome-binding GTPase EW093_16435 PF01018 GTP1/OBG EW093_16440 PF01467 Cytidylyltransferase-like EW093_16495 PF08544 GHMP kinases C terminal EW093_16495 PF00288 GHMP kinases N terminal domain EW093_16500 PF04026 SpoVG EW093_16505 PF14693 Ribosomal protein TL5, C-terminal domain EW093_16505 PF01386 Ribosomal L25p family EW093_16510 PF01195 Peptidyl-tRNA hydrolase EW093_16515 PF01171 PP-loop family EW093_16525 PF17820 PDZ domain EW093_16525 PF13180 PDZ domain EW093_16530 PF00009 Elongation factor Tu GTP binding domain EW093_16530 PF14492 Elongation Factor G, domain II EW093_16530 PF03144 Elongation factor Tu domain 2 EW093_16530 PF06421 GTP-binding protein LepA C-terminus EW093_16530 PF00679 Elongation factor G C-terminus EW093_16535 PF00313 'Cold-shock' DNA-binding domain EW093_16545 PF02811 PHP domain EW093_16545 PF14579 Helix-hairpin-helix motif EW093_16545 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EW093_16545 PF07733 Bacterial DNA polymerase III alpha NTPase domain EW093_16545 PF11490 DNA polymerase III polC-type N-terminus II EW093_16545 PF00929 Exonuclease EW093_16550 PF00075 RNase H EW093_16560 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EW093_16570 PF01702 Queuine tRNA-ribosyltransferase EW093_16590 PF00692 dUTPase EW093_16595 PF01138 3' exoribonuclease family, domain 1 EW093_16595 PF03725 3' exoribonuclease family, domain 2 EW093_16595 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EW093_16595 PF00013 KH domain EW093_16595 PF00575 S1 RNA binding domain EW093_16600 PF00312 Ribosomal protein S15 EW093_16605 PF00156 Phosphoribosyl transferase domain EW093_16620 PF01554 MatE EW093_16625 PF00583 Acetyltransferase (GNAT) family EW093_16645 PF02899 Phage integrase, N-terminal SAM-like domain EW093_16645 PF00589 Phage integrase family EW093_16650 PF00589 Phage integrase family EW093_16650 PF02899 Phage integrase, N-terminal SAM-like domain EW093_16655 PF04986 Putative transposase EW093_16655 PF14319 Transposase zinc-binding domain EW093_16680 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EW093_16700 PF13007 Transposase C of IS166 homeodomain EW093_16700 PF13005 zinc-finger binding domain of transposase IS66 EW093_16700 PF13817 IS66 C-terminal element EW093_16700 PF03050 Transposase IS66 family EW093_16715 PF03050 Transposase IS66 family EW093_16715 PF13817 IS66 C-terminal element EW093_16715 PF13007 Transposase C of IS166 homeodomain EW093_16715 PF13005 zinc-finger binding domain of transposase IS66 EW093_16745 PF13495 Phage integrase, N-terminal SAM-like domain EW093_16745 PF00589 Phage integrase family EW093_16760 PF13847 Methyltransferase domain EW093_16770 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EW093_16770 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EW093_16775 PF00474 Sodium:solute symporter family EW093_16780 PF00497 Bacterial extracellular solute-binding proteins, family 3 EW093_16785 PF00528 Binding-protein-dependent transport system inner membrane component EW093_16790 PF00005 ABC transporter EW093_16795 PF00578 AhpC/TSA family EW093_16800 PF02743 Cache domain EW093_16800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EW093_16800 PF00672 HAMP domain EW093_16810 PF00672 HAMP domain EW093_16810 PF00211 Adenylate and Guanylate cyclase catalytic domain EW093_16825 PF00916 Sulfate permease family EW093_16825 PF01740 STAS domain EW093_16835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EW093_16840 PF01252 Signal peptidase (SPase) II EW093_16845 PF13488 Glycine zipper EW093_16845 PF00691 OmpA family EW093_16850 PF01509 TruB family pseudouridylate synthase (N terminal domain) EW093_16855 PF02033 Ribosome-binding factor A EW093_16860 PF00009 Elongation factor Tu GTP binding domain EW093_16860 PF11987 Translation-initiation factor 2 EW093_16860 PF04760 Translation initiation factor IF-2, N-terminal region EW093_16865 PF08529 NusA N-terminal domain EW093_16865 PF00575 S1 RNA binding domain EW093_16865 PF13184 NusA-like KH domain EW093_16875 PF00156 Phosphoribosyl transferase domain EW093_16880 PF00488 MutS domain V EW093_16880 PF05190 MutS family domain IV EW093_16880 PF05192 MutS domain III EW093_16880 PF05188 MutS domain II EW093_16880 PF01624 MutS domain I EW093_16890 PF04452 RNA methyltransferase EW093_16895 PF03372 Endonuclease/Exonuclease/phosphatase family EW093_16900 PF00009 Elongation factor Tu GTP binding domain EW093_16900 PF03144 Elongation factor Tu domain 2 EW093_16900 PF00679 Elongation factor G C-terminus EW093_16905 PF00128 Alpha amylase, catalytic domain EW093_16905 PF16657 Maltogenic Amylase, C-terminal domain EW093_16905 PF02903 Alpha amylase, N-terminal ig-like domain EW093_16910 PF03788 LrgA family EW093_16915 PF04172 LrgB-like family EW093_16920 PF00528 Binding-protein-dependent transport system inner membrane component EW093_16925 PF00528 Binding-protein-dependent transport system inner membrane component EW093_16945 PF02151 UvrB/uvrC motif EW093_16945 PF04851 Type III restriction enzyme, res subunit EW093_16945 PF00271 Helicase conserved C-terminal domain EW093_16945 PF17757 UvrB interaction domain EW093_16945 PF12344 Ultra-violet resistance protein B EW093_16950 PF13180 PDZ domain EW093_16950 PF17820 PDZ domain EW093_16965 PF00989 PAS fold EW093_16965 PF00512 His Kinase A (phospho-acceptor) domain EW093_16965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EW093_16970 PF09115 DNA polymerase III, delta subunit, C terminal EW093_16980 PF03033 Glycosyltransferase family 28 N-terminal domain EW093_16980 PF04101 Glycosyltransferase family 28 C-terminal domain EW093_17015 PF03033 Glycosyltransferase family 28 N-terminal domain EW093_17015 PF04101 Glycosyltransferase family 28 C-terminal domain EW093_17020 PF03033 Glycosyltransferase family 28 N-terminal domain EW093_17020 PF04101 Glycosyltransferase family 28 C-terminal domain EW093_17095 PF00145 C-5 cytosine-specific DNA methylase EW093_17100 PF17761 DUF1016 N-terminal domain EW093_17100 PF06250 YhcG PDDEXK nuclease domain EW093_17110 PF13614 AAA domain EW093_17200 PF02371 Transposase IS116/IS110/IS902 family EW093_17200 PF01548 Transposase