locus-tag class description J9260_00030 PF01051 Initiator Replication protein J9260_00050 PF02899 Phage integrase, N-terminal SAM-like domain J9260_00050 PF00589 Phage integrase family J9260_00055 PF04986 Putative transposase J9260_00055 PF14319 Transposase zinc-binding domain J9260_00070 PF07015 VirC1 protein J9260_00075 PF02796 Helix-turn-helix domain of resolvase J9260_00075 PF00239 Resolvase, N terminal domain J9260_00085 PF00216 Bacterial DNA-binding protein J9260_00095 PF00696 Amino acid kinase family J9260_00095 PF00583 Acetyltransferase (GNAT) family J9260_00100 PF13580 SIS domain J9260_00105 PF02021 Uncharacterised protein family UPF0102 J9260_00110 PF04348 LppC putative lipoprotein J9260_00115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J9260_00125 PF00719 Inorganic pyrophosphatase J9260_00130 PF03717 Penicillin-binding Protein dimerisation domain J9260_00130 PF00905 Penicillin binding protein transpeptidase domain J9260_00135 PF01098 Cell cycle protein J9260_00140 PF13406 Transglycosylase SLT domain J9260_00145 PF03330 Lytic transglycolase J9260_00145 PF05036 Sporulation related domain J9260_00150 PF07943 Penicillin-binding protein 5, C-terminal domain J9260_00150 PF00768 D-alanyl-D-alanine carboxypeptidase J9260_00155 PF04359 Protein of unknown function (DUF493) J9260_00160 PF03099 Biotin/lipoate A/B protein ligase family J9260_00165 PF03232 Ubiquinone biosynthesis protein COQ7 J9260_00170 PF01323 DSBA-like thioredoxin domain J9260_00175 PF01578 Cytochrome C assembly protein J9260_00180 PF05140 ResB-like family J9260_00185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9260_00190 PF01926 50S ribosome-binding GTPase J9260_00200 PF00595 PDZ domain J9260_00200 PF13180 PDZ domain J9260_00205 PF03755 YicC-like family, N-terminal region J9260_00205 PF08340 Domain of unknown function (DUF1732) J9260_00210 PF00156 Phosphoribosyl transferase domain J9260_00220 PF07963 Prokaryotic N-terminal methylation motif J9260_00220 PF08334 Type II secretion system (T2SS), protein G J9260_00225 PF12019 Type II transport protein GspH J9260_00225 PF07963 Prokaryotic N-terminal methylation motif J9260_00235 PF11612 Type II secretion system (T2SS), protein J J9260_00235 PF07963 Prokaryotic N-terminal methylation motif J9260_00245 PF00873 AcrB/AcrD/AcrF family J9260_00275 PF02424 ApbE family J9260_00280 PF00849 RNA pseudouridylate synthase J9260_00290 PF00877 NlpC/P60 family J9260_00295 PF00072 Response regulator receiver domain J9260_00295 PF00158 Sigma-54 interaction domain J9260_00295 PF02954 Bacterial regulatory protein, Fis family J9260_00300 PF00480 ROK family J9260_00310 PF00849 RNA pseudouridylate synthase J9260_00310 PF04287 tRNA pseudouridine synthase C J9260_00315 PF02798 Glutathione S-transferase, N-terminal domain J9260_00315 PF00043 Glutathione S-transferase, C-terminal domain J9260_00320 PF05685 Putative restriction endonuclease J9260_00330 PF01230 HIT domain J9260_00335 PF13361 UvrD-like helicase C-terminal domain J9260_00335 PF00580 UvrD/REP helicase N-terminal domain J9260_00335 PF12705 PD-(D/E)XK nuclease superfamily J9260_00340 PF02630 SCO1/SenC J9260_00350 PF02622 Uncharacterized ACR, COG1678 J9260_00355 PF03652 Holliday junction resolvase J9260_00360 PF00156 Phosphoribosyl transferase domain J9260_00365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_00365 PF00672 HAMP domain J9260_00365 PF00512 His Kinase A (phospho-acceptor) domain J9260_00380 PF07683 Cobalamin synthesis protein cobW C-terminal domain J9260_00380 PF02492 CobW/HypB/UreG, nucleotide-binding domain J9260_00390 PF00005 ABC transporter J9260_00395 PF15937 prlF antitoxin for toxin YhaV_toxin J9260_00420 PF01464 Transglycosylase SLT domain J9260_00420 PF01551 Peptidase family M23 J9260_00420 PF10145 Phage-related minor tail protein J9260_00425 PF03976 Polyphosphate kinase 2 (PPK2) J9260_00430 PF00072 Response regulator receiver domain J9260_00430 PF00486 Transcriptional regulatory protein, C terminal J9260_00465 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J9260_00475 PF00175 Oxidoreductase NAD-binding domain J9260_00475 PF00970 Oxidoreductase FAD-binding domain J9260_00475 PF01383 CpcD/allophycocyanin linker domain J9260_00485 PF02508 Rnf-Nqr subunit, membrane protein J9260_00490 PF02508 Rnf-Nqr subunit, membrane protein J9260_00495 PF04205 FMN-binding domain J9260_00500 PF03116 NQR2, RnfD, RnfE family J9260_00505 PF13375 RnfC Barrel sandwich hybrid domain J9260_00505 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J9260_00505 PF12838 4Fe-4S dicluster domain J9260_00510 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg J9260_00510 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase J9260_00510 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II J9260_00510 PF10371 Domain of unknown function J9260_00510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9260_00515 PF13187 4Fe-4S dicluster domain J9260_00515 PF04060 Putative Fe-S cluster J9260_00520 PF08335 GlnD PII-uridylyltransferase J9260_00520 PF03710 Glutamate-ammonia ligase adenylyltransferase J9260_00580 PF01565 FAD binding domain J9260_00580 PF09330 D-lactate dehydrogenase, membrane binding J9260_00585 PF02652 L-lactate permease J9260_00595 PF07729 FCD domain J9260_00595 PF00392 Bacterial regulatory proteins, gntR family J9260_00600 PF02754 Cysteine-rich domain J9260_00605 PF02589 LUD domain J9260_00605 PF13183 4Fe-4S dicluster domain J9260_00605 PF11870 Domain of unknown function (DUF3390) J9260_00610 PF02589 LUD domain J9260_00615 PF00072 Response regulator receiver domain J9260_00615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J9260_00615 PF00672 HAMP domain J9260_00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_00615 PF01627 Hpt domain J9260_00615 PF00512 His Kinase A (phospho-acceptor) domain J9260_00625 PF03725 3' exoribonuclease family, domain 2 J9260_00625 PF01138 3' exoribonuclease family, domain 1 J9260_00630 PF01725 Ham1 family J9260_00655 PF00679 Elongation factor G C-terminus J9260_00655 PF00009 Elongation factor Tu GTP binding domain J9260_00655 PF03144 Elongation factor Tu domain 2 J9260_00660 PF05175 Methyltransferase small domain J9260_00670 PF02222 ATP-grasp domain J9260_00670 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J9260_00675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_00675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J9260_00675 PF01627 Hpt domain J9260_00675 PF00072 Response regulator receiver domain J9260_00675 PF00672 HAMP domain J9260_00675 PF00512 His Kinase A (phospho-acceptor) domain J9260_00680 PF00731 AIR carboxylase J9260_00685 PF01259 SAICAR synthetase J9260_00690 PF01370 NAD dependent epimerase/dehydratase family J9260_00695 PF11356 Type II secretion system protein C J9260_00705 PF13635 Domain of unknown function (DUF4143) J9260_00705 PF13173 AAA domain J9260_00715 PF13676 TIR domain J9260_00725 PF00111 2Fe-2S iron-sulfur cluster binding domain J9260_00725 PF03476 MOSC N-terminal beta barrel domain J9260_00725 PF03473 MOSC domain J9260_00730 PF04073 Aminoacyl-tRNA editing domain J9260_00800 PF00892 EamA-like transporter family J9260_00805 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J9260_00815 PF02146 Sir2 family J9260_00825 PF00350 Dynamin family J9260_00850 PF00355 Rieske [2Fe-2S] domain J9260_00865 PF00072 Response regulator receiver domain J9260_00865 PF00196 Bacterial regulatory proteins, luxR family J9260_00870 PF07730 Histidine kinase J9260_00875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_00875 PF07730 Histidine kinase J9260_00875 PF13185 GAF domain J9260_00970 PF06940 Domain of unknown function (DUF1287) J9260_01025 PF01844 HNH endonuclease J9260_01050 PF13532 2OG-Fe(II) oxygenase superfamily J9260_01060 PF04993 TfoX N-terminal domain J9260_01070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9260_01075 PF01053 Cys/Met metabolism PLP-dependent enzyme J9260_01080 PF02661 Fic/DOC family J9260_01090 PF01850 PIN domain J9260_01120 PF08521 Two-component sensor kinase N-terminal J9260_01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_01120 PF00512 His Kinase A (phospho-acceptor) domain J9260_01125 PF00072 Response regulator receiver domain J9260_01125 PF00486 Transcriptional regulatory protein, C terminal J9260_01135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J9260_01165 PF00392 Bacterial regulatory proteins, gntR family J9260_01165 PF00155 Aminotransferase class I and II J9260_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9260_01175 PF03466 LysR substrate binding domain J9260_01180 PF01063 Amino-transferase class IV J9260_01195 PF00797 N-acetyltransferase J9260_01200 PF05685 Putative restriction endonuclease J9260_01205 PF00270 DEAD/DEAH box helicase J9260_01205 PF11898 Domain of unknown function (DUF3418) J9260_01205 PF04408 Helicase associated domain (HA2) J9260_01205 PF00271 Helicase conserved C-terminal domain J9260_01205 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J9260_01215 PF17864 RuvB AAA lid domain J9260_01215 PF05491 RuvB C-terminal winged helix domain J9260_01215 PF05496 Holliday junction DNA helicase RuvB P-loop domain J9260_01220 PF03061 Thioesterase superfamily J9260_01225 PF01618 MotA/TolQ/ExbB proton channel family J9260_01230 PF02472 Biopolymer transport protein ExbD/TolR J9260_01240 PF07676 WD40-like Beta Propeller Repeat J9260_01240 PF04052 TolB amino-terminal domain J9260_01245 PF00691 OmpA family J9260_01255 PF04055 Radical SAM superfamily J9260_01270 PF05685 Putative restriction endonuclease J9260_01280 PF13173 AAA domain J9260_01280 PF13635 Domain of unknown function (DUF4143) J9260_01285 PF06508 Queuosine biosynthesis protein QueC J9260_01290 PF01625 Peptide methionine sulfoxide reductase J9260_01295 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J9260_01305 PF00580 UvrD/REP helicase N-terminal domain J9260_01305 PF13361 UvrD-like helicase C-terminal domain J9260_01310 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_01310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9260_01315 PF08534 Redoxin J9260_01315 PF00462 Glutaredoxin J9260_01335 PF03466 LysR substrate binding domain J9260_01335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9260_01350 PF01300 Telomere recombination J9260_01355 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain J9260_01355 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain J9260_01360 PF00101 Ribulose bisphosphate carboxylase, small chain J9260_01385 PF00936 BMC domain J9260_01390 PF00936 BMC domain J9260_01415 PF00625 Guanylate kinase J9260_01420 PF13419 Haloacid dehalogenase-like hydrolase J9260_01425 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J9260_01425 PF01367 5'-3' exonuclease, C-terminal SAM fold J9260_01435 PF04362 Bacterial Fe(2+) trafficking J9260_01440 PF10576 Iron-sulfur binding domain of endonuclease III J9260_01440 PF14815 NUDIX domain J9260_01440 PF00730 HhH-GPD superfamily base excision DNA repair protein J9260_01440 PF00633 Helix-hairpin-helix motif J9260_01455 PF00596 Class II Aldolase and Adducin N-terminal domain J9260_01460 PF03079 ARD/ARD' family J9260_01470 PF14602 Hexapeptide repeat of succinyl-transferase J9260_01470 PF12804 MobA-like NTP transferase domain J9260_01470 PF00132 Bacterial transferase hexapeptide (six repeats) J9260_01475 PF01380 SIS domain J9260_01480 PF01740 STAS domain J9260_01480 PF00916 Sulfate permease family J9260_01490 PF01967 MoaC family J9260_01495 PF13180 PDZ domain J9260_01495 PF03572 Peptidase family S41 J9260_01500 PF01551 Peptidase family M23 J9260_01510 PF00581 Rhodanese-like domain J9260_01510 PF12368 Rhodanase C-terminal J9260_01510 PF17773 UPF0176 acylphosphatase like domain J9260_01515 PF00462 Glutaredoxin J9260_01520 PF02556 Preprotein translocase subunit SecB J9260_01525 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J9260_01525 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J9260_01530 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J9260_01530 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J9260_01540 PF02566 OsmC-like protein J9260_01545 PF02675 S-adenosylmethionine decarboxylase J9260_01550 PF00877 NlpC/P60 family J9260_01560 PF02915 Rubrerythrin J9260_01575 PF00348 Polyprenyl synthetase J9260_01580 PF00829 Ribosomal prokaryotic L21 protein J9260_01585 PF01016 Ribosomal L27 protein J9260_01600 PF01018 GTP1/OBG J9260_01600 PF01926 50S ribosome-binding GTPase J9260_01605 PF00696 Amino acid kinase family J9260_01605 PF01472 PUA domain J9260_01610 PF04379 ApaG domain J9260_01615 PF01464 Transglycosylase SLT domain J9260_01620 PF01063 Amino-transferase class IV J9260_01630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J9260_01655 PF00085 Thioredoxin J9260_01660 PF07498 Rho termination factor, N-terminal domain J9260_01660 PF07497 Rho termination factor, RNA-binding domain J9260_01660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9260_01665 PF16360 GTP-binding GTPase Middle Region J9260_01665 PF13167 GTP-binding GTPase N-terminal J9260_01665 PF01926 50S ribosome-binding GTPase J9260_01670 PF17209 Hfq protein J9260_01680 PF01119 DNA mismatch repair protein, C-terminal domain J9260_01680 PF08676 MutL C terminal dimerisation domain J9260_01685 PF13180 PDZ domain J9260_01690 PF06827 Zinc finger found in FPG and IleRS J9260_01690 PF08264 Anticodon-binding domain of tRNA J9260_01690 PF00133 tRNA synthetases class I (I, L, M and V) J9260_01695 PF01252 Signal peptidase (SPase) II J9260_01700 PF00206 Lyase J9260_01700 PF14698 Argininosuccinate lyase C-terminal J9260_01705 PF07694 5TMR of 5TMR-LYT J9260_01705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_01705 PF06580 Histidine kinase J9260_01710 PF04397 LytTr DNA-binding domain J9260_01710 PF00072 Response regulator receiver domain J9260_01725 PF00119 ATP synthase A chain J9260_01730 PF00137 ATP synthase subunit C J9260_01735 PF00430 ATP synthase B/B' CF(0) J9260_01740 PF00213 ATP synthase delta (OSCP) subunit J9260_01745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9260_01745 PF02874 ATP synthase alpha/beta family, beta-barrel domain J9260_01745 PF00306 ATP synthase alpha/beta chain, C terminal domain J9260_01750 PF00231 ATP synthase J9260_01755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9260_01755 PF02874 ATP synthase alpha/beta family, beta-barrel domain J9260_01760 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J9260_01760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J9260_01765 PF09820 Predicted AAA-ATPase J9260_01765 PF08011 PD-(D/E)XK nuclease superfamily J9260_01770 PF04751 Protein of unknown function (DUF615) J9260_01775 PF07726 ATPase family associated with various cellular activities (AAA) J9260_01775 PF17863 AAA lid domain J9260_01785 PF01841 Transglutaminase-like superfamily J9260_01785 PF11992 Domain of unknown function (DUF3488) J9260_01785 PF13559 Domain of unknown function (DUF4129) J9260_01815 PF03971 Monomeric isocitrate dehydrogenase J9260_01820 PF01618 MotA/TolQ/ExbB proton channel family J9260_01825 PF02472 Biopolymer transport protein ExbD/TolR J9260_01830 PF03544 Gram-negative bacterial TonB protein C-terminal J9260_01835 PF14306 PUA-like domain J9260_01835 PF01747 ATP-sulfurylase J9260_01840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9260_01840 PF03466 LysR substrate binding domain J9260_01850 PF01636 Phosphotransferase enzyme family J9260_01855 PF00483 Nucleotidyl transferase J9260_01860 PF13335 Magnesium chelatase, subunit ChlI C-terminal J9260_01860 PF01078 Magnesium chelatase, subunit ChlI J9260_01870 PF00909 Ammonium Transporter Family J9260_01875 PF00543 Nitrogen regulatory protein P-II J9260_01885 PF04380 Membrane fusogenic activity J9260_01895 PF03807 NADP oxidoreductase coenzyme F420-dependent J9260_01895 PF14748 Pyrroline-5-carboxylate reductase dimerisation J9260_01900 PF02325 YGGT family J9260_01905 PF02594 Uncharacterised ACR, YggU family COG1872 J9260_01910 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) J9260_01915 PF04262 Glutamate-cysteine ligase J9260_01920 PF01026 TatD related DNase J9260_01925 PF13847 Methyltransferase domain J9260_01930 PF07075 Protein of unknown function (DUF1343) J9260_01940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J9260_01940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J9260_01945 PF13627 Prokaryotic lipoprotein-attachment site J9260_01950 PF05685 Putative restriction endonuclease J9260_01955 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J9260_01955 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J9260_01960 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_01965 PF01966 HD domain J9260_01965 PF01743 Poly A polymerase head domain J9260_01965 PF12627 Probable RNA and SrmB- binding site of polymerase A J9260_01980 PF08534 Redoxin J9260_01990 PF00266 Aminotransferase class-V J9260_02005 PF13537 Glutamine amidotransferase domain J9260_02005 PF00733 Asparagine synthase J9260_02025 PF00004 ATPase family associated with various cellular activities (AAA) J9260_02025 PF01434 Peptidase family M41 J9260_02025 PF17862 AAA+ lid domain J9260_02030 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system J9260_02035 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system J9260_02050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J9260_02050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J9260_02055 PF00202 Aminotransferase class-III J9260_02060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J9260_02060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J9260_02065 PF03372 Endonuclease/Exonuclease/phosphatase family J9260_02070 PF07690 Major Facilitator Superfamily J9260_02085 PF03739 Lipopolysaccharide export system permease LptF/LptG J9260_02095 PF04055 Radical SAM superfamily J9260_02095 PF06969 HemN C-terminal domain J9260_02120 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) J9260_02125 PF03109 ABC1 family J9260_02140 PF00691 OmpA family J9260_02150 PF00691 OmpA family J9260_02150 PF00223 Photosystem I psaA/psaB protein J9260_02155 PF00398 Ribosomal RNA adenine dimethylase J9260_02165 PF00270 DEAD/DEAH box helicase J9260_02165 PF00271 Helicase conserved C-terminal domain J9260_02165 PF00570 HRDC domain J9260_02165 PF16124 RecQ zinc-binding J9260_02165 PF09382 RQC domain J9260_02170 PF02597 ThiS family J9260_02175 PF02391 MoaE protein J9260_02180 PF01668 SmpB protein J9260_02205 PF00512 His Kinase A (phospho-acceptor) domain J9260_02205 PF17149 Periplasmic sensor domain found in signal transduction proteins J9260_02205 PF00672 HAMP domain J9260_02205 PF01627 Hpt domain J9260_02205 PF00072 Response regulator receiver domain J9260_02205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_02220 PF07228 Stage II sporulation protein E (SpoIIE) J9260_02220 PF13426 PAS domain J9260_02225 PF01627 Hpt domain J9260_02225 PF00672 HAMP domain J9260_02225 PF00072 Response regulator receiver domain J9260_02225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J9260_02225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_02225 PF00512 His Kinase A (phospho-acceptor) domain J9260_02235 PF01740 STAS domain J9260_02240 PF00483 Nucleotidyl transferase J9260_02250 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J9260_02250 PF00703 Glycosyl hydrolases family 2 J9260_02250 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J9260_02250 PF16355 Domain of unknown function (DUF4982) J9260_02250 PF02837 Glycosyl hydrolases family 2, sugar binding domain J9260_02255 PF00535 Glycosyl transferase family 2 J9260_02255 PF03552 Cellulose synthase J9260_02255 PF07238 PilZ domain J9260_02295 PF00140 Sigma-70 factor, region 1.2 J9260_02295 PF04542 Sigma-70 region 2 J9260_02295 PF04545 Sigma-70, region 4 J9260_02325 PF00072 Response regulator receiver domain J9260_02325 PF00486 Transcriptional regulatory protein, C terminal J9260_02330 PF00512 His Kinase A (phospho-acceptor) domain J9260_02330 PF00672 HAMP domain J9260_02330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_02340 PF00842 Alanine racemase, C-terminal domain J9260_02340 PF01168 Alanine racemase, N-terminal domain J9260_02345 PF03796 DnaB-like helicase C terminal domain J9260_02345 PF00772 DnaB-like helicase N terminal domain J9260_02350 PF01281 Ribosomal protein L9, N-terminal domain J9260_02350 PF03948 Ribosomal protein L9, C-terminal domain J9260_02360 PF01084 Ribosomal protein S18 J9260_02365 PF01250 Ribosomal protein S6 J9260_02370 PF00069 Protein kinase domain J9260_02370 PF07238 PilZ domain J9260_02390 PF03553 Na+/H+ antiporter family J9260_02395 PF03553 Na+/H+ antiporter family J9260_02405 PF13667 ThiC-associated domain J9260_02405 PF01964 Radical SAM ThiC family J9260_02420 PF02381 MraZ protein, putative antitoxin-like J9260_02425 PF01795 MraW methylase family J9260_02435 PF03717 Penicillin-binding Protein dimerisation domain J9260_02435 PF00905 Penicillin binding protein transpeptidase domain J9260_02440 PF08245 Mur ligase middle domain J9260_02440 PF01225 Mur ligase family, catalytic domain J9260_02440 PF02875 Mur ligase family, glutamate ligase domain J9260_02445 PF08245 Mur ligase middle domain J9260_02445 PF02875 Mur ligase family, glutamate ligase domain J9260_02445 PF01225 Mur ligase family, catalytic domain J9260_02450 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J9260_02450 PF00953 Glycosyl transferase family 4 J9260_02455 PF02875 Mur ligase family, glutamate ligase domain J9260_02455 PF08245 Mur ligase middle domain J9260_02460 PF01098 Cell cycle protein J9260_02465 PF03033 Glycosyltransferase family 28 N-terminal domain J9260_02465 PF04101 Glycosyltransferase family 28 C-terminal domain J9260_02470 PF08245 Mur ligase middle domain J9260_02470 PF02875 Mur ligase family, glutamate ligase domain J9260_02470 PF01225 Mur ligase family, catalytic domain J9260_02475 PF01820 D-ala D-ala ligase N-terminus J9260_02475 PF07478 D-ala D-ala ligase C-terminus J9260_02480 PF08478 POTRA domain, FtsQ-type J9260_02480 PF03799 Cell division protein FtsQ J9260_02485 PF02491 SHS2 domain inserted in FTSA J9260_02490 PF12327 FtsZ family, C-terminal domain J9260_02490 PF00091 Tubulin/FtsZ family, GTPase domain J9260_02495 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J9260_02505 PF10145 Phage-related minor tail protein J9260_02505 PF01551 Peptidase family M23 J9260_02505 PF01464 Transglycosylase SLT domain J9260_02510 PF07517 SecA DEAD-like domain J9260_02510 PF02810 SEC-C motif J9260_02510 PF07516 SecA Wing and Scaffold domain J9260_02510 PF01043 SecA preprotein cross-linking domain J9260_02515 PF01960 ArgJ family J9260_02520 PF00293 NUDIX domain J9260_02530 PF00270 DEAD/DEAH box helicase J9260_02530 PF00271 Helicase conserved C-terminal domain J9260_02535 PF18073 Rubredoxin metal binding domain J9260_02540 PF01595 Cyclin M transmembrane N-terminal domain J9260_02540 PF00571 CBS domain J9260_02540 PF03471 Transporter associated domain J9260_02550 PF00448 SRP54-type protein, GTPase domain J9260_02550 PF02881 SRP54-type protein, helical bundle domain J9260_02550 PF02978 Signal peptide binding domain J9260_02575 PF06940 Domain of unknown function (DUF1287) J9260_02580 PF00886 Ribosomal protein S16 J9260_02585 PF01782 RimM N-terminal domain J9260_02585 PF05239 PRC-barrel domain J9260_02590 PF01746 tRNA (Guanine-1)-methyltransferase J9260_02595 PF01245 Ribosomal protein L19 J9260_02600 PF00563 EAL domain J9260_02600 PF00990 Diguanylate cyclase, GGDEF domain J9260_02600 PF08448 PAS fold J9260_02605 PF01225 Mur ligase family, catalytic domain J9260_02605 PF02875 Mur ligase family, glutamate ligase domain J9260_02605 PF08245 Mur ligase middle domain J9260_02610 PF02441 Flavoprotein J9260_02615 PF00085 Thioredoxin J9260_02640 PF00746 LPXTG cell wall anchor motif J9260_02640 PF17210 SdrD B-like domain J9260_02640 PF04650 YSIRK type signal peptide J9260_02640 PF17961 Bacterial Ig domain J9260_02645 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J9260_02680 PF00072 Response regulator receiver domain J9260_02680 PF00486 Transcriptional regulatory protein, C terminal J9260_02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_02685 PF00512 His Kinase A (phospho-acceptor) domain J9260_02685 PF09308 LuxQ, periplasmic J9260_02685 PF00072 Response regulator receiver domain J9260_02700 PF01264 Chorismate synthase J9260_02720 PF12832 MFS_1 like family J9260_02725 PF02237 Biotin protein ligase C terminal domain J9260_02725 PF03099 Biotin/lipoate A/B protein ligase family J9260_02730 PF03309 Type III pantothenate kinase J9260_02745 PF01433 Peptidase family M1 domain J9260_02745 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J9260_02745 PF11940 Domain of unknown function (DUF3458) Ig-like fold J9260_02755 PF01844 HNH endonuclease J9260_02765 PF13640 2OG-Fe(II) oxygenase superfamily J9260_02765 PF18331 PKHD-type hydroxylase C-terminal domain J9260_02800 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J9260_02800 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J9260_02805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J9260_02805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J9260_02810 PF02635 DsrE/DsrF-like family J9260_02815 PF02635 DsrE/DsrF-like family J9260_02820 PF04077 DsrH like protein J9260_02825 PF04358 DsrC like protein J9260_02840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J9260_02840 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_02850 PF13247 4Fe-4S dicluster domain J9260_02870 PF00459 Inositol monophosphatase family J9260_02885 PF00633 Helix-hairpin-helix motif J9260_02885 PF10576 Iron-sulfur binding domain of endonuclease III J9260_02885 PF00730 HhH-GPD superfamily base excision DNA repair protein J9260_02890 PF02508 Rnf-Nqr subunit, membrane protein J9260_02895 PF04205 FMN-binding domain J9260_02900 PF03116 NQR2, RnfD, RnfE family J9260_02905 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J9260_02905 PF12838 4Fe-4S dicluster domain J9260_02905 PF13375 RnfC Barrel sandwich hybrid domain J9260_02905 PF10531 SLBB domain J9260_02910 PF04060 Putative Fe-S cluster J9260_02915 PF02508 Rnf-Nqr subunit, membrane protein J9260_02920 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J9260_02925 PF00639 PPIC-type PPIASE domain J9260_02925 PF09312 SurA N-terminal domain J9260_02930 PF04453 LPS transport system D J9260_02930 PF03968 OstA-like protein J9260_02940 PF07687 Peptidase dimerisation domain J9260_02940 PF01546 Peptidase family M20/M25/M40 J9260_02945 PF03960 ArsC family J9260_02955 PF10414 Sirohaem synthase dimerisation region J9260_02955 PF14824 Sirohaem biosynthesis protein central J9260_02955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J9260_02985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9260_02990 PF00528 Binding-protein-dependent transport system inner membrane component J9260_02995 PF00528 Binding-protein-dependent transport system inner membrane component J9260_02995 PF12911 N-terminal TM domain of oligopeptide transport permease C J9260_03000 PF00005 ABC transporter J9260_03000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9260_03005 PF18075 FtsX extracellular domain J9260_03010 PF00005 ABC transporter J9260_03015 PF00448 SRP54-type protein, GTPase domain J9260_03015 PF02881 SRP54-type protein, helical bundle domain J9260_03020 PF00675 Insulinase (Peptidase family M16) J9260_03020 PF05193 Peptidase M16 inactive domain J9260_03025 PF05193 Peptidase M16 inactive domain J9260_03040 PF00082 Subtilase family J9260_03040 PF04151 Bacterial pre-peptidase C-terminal domain J9260_03045 PF00009 Elongation factor Tu GTP binding domain J9260_03045 PF16658 Class II release factor RF3, C-terminal domain J9260_03045 PF03144 Elongation factor Tu domain 2 J9260_03055 PF00085 Thioredoxin J9260_03060 PF00999 Sodium/hydrogen exchanger family J9260_03065 PF00072 Response regulator receiver domain J9260_03065 PF00486 Transcriptional regulatory protein, C terminal J9260_03070 PF00512 His Kinase A (phospho-acceptor) domain J9260_03070 PF02702 Osmosensitive K+ channel His kinase sensor domain J9260_03070 PF13493 Domain of unknown function (DUF4118) J9260_03070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_03075 PF00474 Sodium:solute symporter family J9260_03085 PF00171 Aldehyde dehydrogenase family J9260_03095 PF01022 Bacterial regulatory protein, arsR family J9260_03100 PF06779 Uncharacterised MFS-type transporter YbfB J9260_03105 PF03692 Putative zinc- or iron-chelating domain J9260_03110 PF00830 Ribosomal L28 family J9260_03115 PF00471 Ribosomal protein L33 J9260_03125 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J9260_03130 PF02152 Dihydroneopterin aldolase J9260_03150 PF00437 Type II/IV secretion system protein J9260_03150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J9260_03155 PF00482 Type II secretion system (T2SS), protein F J9260_03160 PF07963 Prokaryotic N-terminal methylation motif J9260_03160 PF08334 Type II secretion system (T2SS), protein G J9260_03180 PF03934 Type II secretion system (T2SS), protein K J9260_03195 PF13417 Glutathione S-transferase, N-terminal domain J9260_03205 PF09335 SNARE associated Golgi protein J9260_03260 PF00196 Bacterial regulatory proteins, luxR family J9260_03260 PF00072 Response regulator receiver domain J9260_03265 PF03466 LysR substrate binding domain J9260_03265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9260_03270 PF00378 Enoyl-CoA hydratase/isomerase J9260_03270 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J9260_03270 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J9260_03275 PF00462 Glutaredoxin J9260_03285 PF03023 Lipid II flippase MurJ J9260_03330 PF00534 Glycosyl transferases group 1 J9260_03330 PF13439 Glycosyltransferase Family 4 J9260_03335 PF00085 Thioredoxin J9260_03345 PF00072 Response regulator receiver domain J9260_03345 PF00486 Transcriptional regulatory protein, C terminal J9260_03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_03365 PF00873 AcrB/AcrD/AcrF family J9260_03380 PF01292 Prokaryotic cytochrome b561 J9260_03390 PF08019 Phosphoethanolamine transferase EptA/EptB J9260_03390 PF00884 Sulfatase J9260_03405 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding J9260_03405 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_03405 PF10518 TAT (twin-arginine translocation) pathway signal sequence J9260_03420 PF01292 Prokaryotic cytochrome b561 J9260_03425 PF00072 Response regulator receiver domain J9260_03425 PF00486 Transcriptional regulatory protein, C terminal J9260_03430 PF08521 Two-component sensor kinase N-terminal J9260_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_03430 PF00512 His Kinase A (phospho-acceptor) domain J9260_03440 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding J9260_03440 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_03440 PF10518 TAT (twin-arginine translocation) pathway signal sequence J9260_03450 PF00501 AMP-binding enzyme J9260_03460 PF00106 short chain dehydrogenase J9260_03475 PF01938 TRAM domain J9260_03475 PF00919 Uncharacterized protein family UPF0004 J9260_03475 PF04055 Radical SAM superfamily J9260_03480 PF01476 LysM domain J9260_03480 PF08239 Bacterial SH3 domain J9260_03480 PF00877 NlpC/P60 family J9260_03485 PF00873 AcrB/AcrD/AcrF family J9260_03490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J9260_03505 PF00883 Cytosol aminopeptidase family, catalytic domain J9260_03505 PF02789 Cytosol aminopeptidase family, N-terminal domain J9260_03510 PF00293 NUDIX domain J9260_03510 PF09297 NADH pyrophosphatase zinc ribbon domain J9260_03520 PF00691 OmpA family J9260_03530 PF00117 Glutamine amidotransferase class-I J9260_03535 PF04715 Anthranilate synthase component I, N terminal region J9260_03535 PF00425 chorismate binding enzyme J9260_03540 PF13419 Haloacid dehalogenase-like hydrolase J9260_03545 PF00834 Ribulose-phosphate 3 epimerase family J9260_03565 PF13525 Outer membrane lipoprotein J9260_03570 PF00849 RNA pseudouridylate synthase J9260_03570 PF01479 S4 domain J9260_03580 PF13472 GDSL-like Lipase/Acylhydrolase family J9260_03585 PF00005 ABC transporter J9260_03600 PF07690 Major Facilitator Superfamily J9260_03610 PF05685 Putative restriction endonuclease J9260_03625 PF13614 AAA domain J9260_03630 PF01061 ABC-2 type transporter J9260_03635 PF00005 ABC transporter J9260_03640 PF00912 Transglycosylase J9260_03670 PF01728 FtsJ-like methyltransferase J9260_03675 PF17862 AAA+ lid domain J9260_03675 PF00004 ATPase family associated with various cellular activities (AAA) J9260_03675 PF06480 FtsH Extracellular J9260_03675 PF01434 Peptidase family M41 J9260_03680 PF00809 Pterin binding enzyme J9260_03685 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J9260_03685 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J9260_03685 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J9260_03685 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J9260_03690 PF00121 Triosephosphate isomerase J9260_03695 PF03840 Preprotein translocase SecG subunit J9260_03705 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J9260_03710 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J9260_03715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J9260_03720 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J9260_03730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J9260_03730 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J9260_03730 PF10531 SLBB domain J9260_03735 PF00384 Molybdopterin oxidoreductase J9260_03735 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J9260_03735 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J9260_03740 PF00146 NADH dehydrogenase J9260_03745 PF12838 4Fe-4S dicluster domain J9260_03750 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J9260_03755 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J9260_03760 PF00361 Proton-conducting membrane transporter J9260_03760 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J9260_03765 PF00361 Proton-conducting membrane transporter J9260_03765 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J9260_03770 PF00361 Proton-conducting membrane transporter J9260_03785 PF17384 RimP C-terminal SH3 domain J9260_03785 PF02576 RimP N-terminal domain J9260_03790 PF08529 NusA N-terminal domain J9260_03790 PF13184 NusA-like KH domain J9260_03795 PF00009 Elongation factor Tu GTP binding domain J9260_03795 PF03144 Elongation factor Tu domain 2 J9260_03795 PF11987 Translation-initiation factor 2 J9260_03795 PF04760 Translation initiation factor IF-2, N-terminal region J9260_03795 PF08364 Bacterial translation initiation factor IF-2 associated region J9260_03800 PF02033 Ribosome-binding factor A J9260_03805 PF09157 Pseudouridine synthase II TruB, C-terminal J9260_03805 PF16198 tRNA pseudouridylate synthase B C-terminal domain J9260_03805 PF01509 TruB family pseudouridylate synthase (N terminal domain) J9260_03815 PF01544 CorA-like Mg2+ transporter protein J9260_03830 PF03937 Flavinator of succinate dehydrogenase J9260_03835 PF13237 4Fe-4S dicluster domain J9260_03835 PF13085 2Fe-2S iron-sulfur cluster binding domain J9260_03840 PF02910 Fumarate reductase flavoprotein C-term J9260_03840 PF00890 FAD binding domain J9260_03850 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J9260_03860 PF16078 2-oxoglutarate dehydrogenase N-terminus J9260_03860 PF00676 Dehydrogenase E1 component J9260_03860 PF16870 2-oxoglutarate dehydrogenase C-terminal J9260_03860 PF02779 Transketolase, pyrimidine binding domain J9260_03865 PF03969 AFG1-like ATPase J9260_03880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J9260_03880 PF00364 Biotin-requiring enzyme J9260_03880 PF02817 e3 binding domain J9260_03885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9260_03885 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_03890 PF00549 CoA-ligase J9260_03890 PF08442 ATP-grasp domain J9260_03895 PF02629 CoA binding domain J9260_03895 PF00549 CoA-ligase J9260_03900 PF00285 Citrate synthase, C-terminal domain J9260_03905 PF00330 Aconitase family (aconitate hydratase) J9260_03905 PF06434 Aconitate hydratase 2 N-terminus J9260_03905 PF11791 Aconitate B N-terminal domain J9260_03925 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_03925 PF18113 Rubredoxin binding C-terminal domain J9260_03930 PF09190 DALR domain J9260_03930 PF01406 tRNA synthetases class I (C) catalytic domain J9260_03965 PF02769 AIR synthase related protein, C-terminal domain J9260_03965 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J9260_03965 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J9260_03970 PF01865 Protein of unknown function DUF47 J9260_03975 PF01384 Phosphate transporter family J9260_03980 PF01627 Hpt domain J9260_03980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_03980 PF00672 HAMP domain J9260_03980 PF00072 Response regulator receiver domain J9260_03980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J9260_03980 PF00512 His Kinase A (phospho-acceptor) domain J9260_03985 PF11808 Phosphate regulon sensor protein PhoR J9260_03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_03985 PF00512 His Kinase A (phospho-acceptor) domain J9260_03985 PF00989 PAS fold J9260_03990 PF00486 Transcriptional regulatory protein, C terminal J9260_03990 PF00072 Response regulator receiver domain J9260_03995 PF01895 PhoU domain J9260_04000 PF00005 ABC transporter J9260_04005 PF00528 Binding-protein-dependent transport system inner membrane component J9260_04010 PF00528 Binding-protein-dependent transport system inner membrane component J9260_04035 PF01209 ubiE/COQ5 methyltransferase family J9260_04045 PF12849 PBP superfamily domain J9260_04050 PF00224 Pyruvate kinase, barrel domain J9260_04050 PF02887 Pyruvate kinase, alpha/beta domain J9260_04065 PF00893 Small Multidrug Resistance protein J9260_04080 PF13439 Glycosyltransferase Family 4 J9260_04080 PF00534 Glycosyl transferases group 1 J9260_04090 PF02547 Queuosine biosynthesis protein J9260_04100 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J9260_04100 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J9260_04105 PF03618 Kinase/pyrophosphorylase J9260_04110 PF00391 PEP-utilising enzyme, mobile domain J9260_04110 PF02896 PEP-utilising enzyme, TIM barrel domain J9260_04110 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J9260_04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9260_04115 PF03466 LysR substrate binding domain J9260_04120 PF13439 Glycosyltransferase Family 4 J9260_04120 PF00534 Glycosyl transferases group 1 J9260_04125 PF00115 Cytochrome C and Quinol oxidase polypeptide I J9260_04140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9260_04140 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J9260_04145 PF13746 4Fe-4S dicluster domain J9260_04145 PF12801 4Fe-4S binding domain J9260_04145 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J9260_04155 PF06969 HemN C-terminal domain J9260_04155 PF04055 Radical SAM superfamily J9260_04160 PF13545 Crp-like helix-turn-helix domain J9260_04160 PF00027 Cyclic nucleotide-binding domain J9260_04170 PF01066 CDP-alcohol phosphatidyltransferase J9260_04180 PF12704 MacB-like periplasmic core domain J9260_04180 PF02687 FtsX-like permease family J9260_04185 PF02687 FtsX-like permease family J9260_04185 PF12704 MacB-like periplasmic core domain J9260_04190 PF00005 ABC transporter J9260_04200 PF00753 Metallo-beta-lactamase superfamily J9260_04200 PF03772 Competence protein J9260_04220 PF00795 Carbon-nitrogen hydrolase J9260_04230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_04230 PF00512 His Kinase A (phospho-acceptor) domain J9260_04245 PF04337 Protein of unknown function, DUF480 J9260_04260 PF02254 TrkA-N domain J9260_04260 PF02080 TrkA-C domain J9260_04260 PF00999 Sodium/hydrogen exchanger family J9260_04265 PF02600 Disulfide bond formation protein DsbB J9260_04270 PF01207 Dihydrouridine synthase (Dus) J9260_04275 PF02954 Bacterial regulatory protein, Fis family J9260_04285 PF03150 Di-haem cytochrome c peroxidase J9260_04290 PF01145 SPFH domain / Band 7 family J9260_04295 PF01145 SPFH domain / Band 7 family J9260_04305 PF00005 ABC transporter J9260_04305 PF17760 UvrA interaction domain J9260_04305 PF17755 UvrA DNA-binding domain J9260_04315 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J9260_04320 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_04325 PF01580 FtsK/SpoIIIE family J9260_04325 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J9260_04325 PF17854 FtsK alpha domain J9260_04325 PF09397 Ftsk gamma domain J9260_04330 PF03548 Outer membrane lipoprotein carrier protein LolA J9260_04335 PF00004 ATPase family associated with various cellular activities (AAA) J9260_04335 PF16193 AAA C-terminal domain J9260_04335 PF12002 MgsA AAA+ ATPase C terminal J9260_04345 PF01293 Phosphoenolpyruvate carboxykinase J9260_04350 PF00270 DEAD/DEAH box helicase J9260_04350 PF00271 Helicase conserved C-terminal domain J9260_04355 PF06123 Inner membrane protein CreD J9260_04360 PF01555 DNA methylase J9260_04385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J9260_04395 PF00528 Binding-protein-dependent transport system inner membrane component J9260_04400 PF00528 Binding-protein-dependent transport system inner membrane component J9260_04400 PF12911 N-terminal TM domain of oligopeptide transport permease C J9260_04405 PF08264 Anticodon-binding domain of tRNA J9260_04405 PF00133 tRNA synthetases class I (I, L, M and V) J9260_04405 PF10458 Valyl tRNA synthetase tRNA binding arm J9260_04415 PF04411 PD-(D/E)XK nuclease superfamily J9260_04430 PF04411 PD-(D/E)XK nuclease superfamily J9260_04455 PF05685 Putative restriction endonuclease J9260_04470 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_04470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9260_04475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J9260_04475 PF00364 Biotin-requiring enzyme J9260_04475 PF02817 e3 binding domain J9260_04480 PF17831 Pyruvate dehydrogenase E1 component middle domain J9260_04480 PF00456 Transketolase, thiamine diphosphate binding domain J9260_04485 PF00929 Exonuclease J9260_04490 PF13416 Bacterial extracellular solute-binding protein J9260_04495 PF00528 Binding-protein-dependent transport system inner membrane component J9260_04500 PF00899 ThiF family J9260_04505 PF00709 Adenylosuccinate synthetase J9260_04510 PF13393 Histidyl-tRNA synthetase J9260_04520 PF01145 SPFH domain / Band 7 family J9260_04525 PF01145 SPFH domain / Band 7 family J9260_04530 PF01476 LysM domain J9260_04530 PF08525 Opacity-associated protein A N-terminal motif J9260_04530 PF01551 Peptidase family M23 J9260_04535 PF00155 Aminotransferase class I and II J9260_04540 PF02151 UvrB/uvrC motif J9260_04540 PF08459 UvrC Helix-hairpin-helix N-terminal J9260_04540 PF01541 GIY-YIG catalytic domain J9260_04545 PF01066 CDP-alcohol phosphatidyltransferase J9260_04580 PF00829 Ribosomal prokaryotic L21 protein J9260_04585 PF00691 OmpA family J9260_04585 PF18393 MotY N-terminal domain J9260_04590 PF00994 Probable molybdopterin binding domain J9260_04590 PF03453 MoeA N-terminal region (domain I and II) J9260_04590 PF03454 MoeA C-terminal region (domain IV) J9260_04595 PF06965 Na+/H+ antiporter 1 J9260_04600 PF01699 Sodium/calcium exchanger protein J9260_04615 PF02355 Protein export membrane protein J9260_04615 PF07549 SecD/SecF GG Motif J9260_04620 PF13721 SecD export protein N-terminal TM region J9260_04620 PF07549 SecD/SecF GG Motif J9260_04620 PF02355 Protein export membrane protein J9260_04625 PF02699 Preprotein translocase subunit J9260_04630 PF00152 tRNA synthetases class II (D, K and N) J9260_04635 PF09285 Elongation factor P, C-terminal J9260_04635 PF01132 Elongation factor P (EF-P) OB domain J9260_04635 PF08207 Elongation factor P (EF-P) KOW-like domain J9260_04640 PF04320 Protein with unknown function (DUF469) J9260_04655 PF00814 Glycoprotease family J9260_04660 PF03781 Sulfatase-modifying factor enzyme 1 J9260_04670 PF00266 Aminotransferase class-V J9260_04685 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J9260_04700 PF13406 Transglycosylase SLT domain J9260_04710 PF00171 Aldehyde dehydrogenase family J9260_04715 PF00155 Aminotransferase class I and II J9260_04720 PF01784 NIF3 (NGG1p interacting factor 3) J9260_04725 PF00355 Rieske [2Fe-2S] domain J9260_04725 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J9260_04730 PF00032 Cytochrome b(C-terminal)/b6/petD J9260_04730 PF00033 Cytochrome b/b6/petB J9260_04735 PF02167 Cytochrome C1 family J9260_04740 PF00043 Glutathione S-transferase, C-terminal domain J9260_04740 PF02798 Glutathione S-transferase, N-terminal domain J9260_04745 PF04386 Stringent starvation protein B J9260_04750 PF00186 Dihydrofolate reductase J9260_04755 PF01979 Amidohydrolase family J9260_04765 PF06798 PrkA serine protein kinase C-terminal domain J9260_04765 PF08298 PrkA AAA domain J9260_04770 PF04285 Protein of unknown function (DUF444) J9260_04775 PF04293 SpoVR like protein J9260_04790 PF13406 Transglycosylase SLT domain J9260_04795 PF01544 CorA-like Mg2+ transporter protein J9260_04800 PF03668 P-loop ATPase protein family J9260_04805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J9260_04810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J9260_04815 PF00309 Sigma-54 factor, Activator interacting domain (AID) J9260_04815 PF04963 Sigma-54 factor, core binding domain J9260_04815 PF04552 Sigma-54, DNA binding domain J9260_04820 PF00005 ABC transporter J9260_04820 PF12399 Branched-chain amino acid ATP-binding cassette transporter J9260_04840 PF00571 CBS domain J9260_04840 PF01380 SIS domain J9260_04855 PF01025 GrpE J9260_04860 PF00012 Hsp70 protein J9260_04865 PF00226 DnaJ domain J9260_04865 PF00684 DnaJ central domain J9260_04865 PF01556 DnaJ C terminal domain J9260_04870 PF01113 Dihydrodipicolinate reductase, N-terminus J9260_04870 PF05173 Dihydrodipicolinate reductase, C-terminus J9260_04880 PF04143 Sulphur transport J9260_04885 PF01322 Cytochrome C' J9260_04895 PF01641 SelR domain J9260_04900 PF00312 Ribosomal protein S15 J9260_04905 PF00013 KH domain J9260_04905 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J9260_04905 PF01138 3' exoribonuclease family, domain 1 J9260_04905 PF00575 S1 RNA binding domain J9260_04905 PF03725 3' exoribonuclease family, domain 2 J9260_04910 PF01909 Nucleotidyltransferase domain J9260_04910 PF01966 HD domain J9260_04910 PF08335 GlnD PII-uridylyltransferase J9260_04910 PF01842 ACT domain J9260_04915 PF00557 Metallopeptidase family M24 J9260_04920 PF00318 Ribosomal protein S2 J9260_04925 PF00889 Elongation factor TS J9260_04930 PF00155 Aminotransferase class I and II J9260_04935 PF02153 Prephenate dehydrogenase J9260_04950 PF00872 Transposase, Mutator family J9260_04960 PF00872 Transposase, Mutator family J9260_04965 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J9260_04965 PF01266 FAD dependent oxidoreductase J9260_04980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9260_04985 PF00155 Aminotransferase class I and II J9260_04990 PF00132 Bacterial transferase hexapeptide (six repeats) J9260_04990 PF14602 Hexapeptide repeat of succinyl-transferase J9260_04990 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J9260_04995 PF00149 Calcineurin-like phosphoesterase J9260_05000 PF13514 AAA domain J9260_05005 PF01464 Transglycosylase SLT domain J9260_05010 PF02503 Polyphosphate kinase middle domain J9260_05010 PF13090 Polyphosphate kinase C-terminal domain 2 J9260_05010 PF17941 Polyphosphate kinase C-terminal domain 1 J9260_05010 PF13089 Polyphosphate kinase N-terminal domain J9260_05015 PF01618 MotA/TolQ/ExbB proton channel family J9260_05020 PF02472 Biopolymer transport protein ExbD/TolR J9260_05025 PF00664 ABC transporter transmembrane region J9260_05025 PF00005 ABC transporter J9260_05030 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J9260_05035 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J9260_05035 PF03966 Trm112p-like protein J9260_05040 PF02348 Cytidylyltransferase J9260_05060 PF00872 Transposase, Mutator family J9260_05065 PF00881 Nitroreductase family J9260_05070 PF04228 Putative neutral zinc metallopeptidase J9260_05100 PF04545 Sigma-70, region 4 J9260_05100 PF04539 Sigma-70 region 3 J9260_05100 PF00140 Sigma-70 factor, region 1.2 J9260_05100 PF04542 Sigma-70 region 2 J9260_05110 PF00155 Aminotransferase class I and II J9260_05115 PF03447 Homoserine dehydrogenase, NAD binding domain J9260_05115 PF00742 Homoserine dehydrogenase J9260_05115 PF01842 ACT domain J9260_05120 PF00291 Pyridoxal-phosphate dependent enzyme J9260_05120 PF14821 Threonine synthase N terminus J9260_05125 PF00691 OmpA family J9260_05125 PF13488 Glycine zipper J9260_05130 PF01066 CDP-alcohol phosphatidyltransferase J9260_05135 PF01594 AI-2E family transporter J9260_05155 PF11412 Disulphide bond corrector protein DsbC J9260_05155 PF02683 Cytochrome C biogenesis protein transmembrane region J9260_05160 PF00816 H-NS histone family J9260_05165 PF08448 PAS fold J9260_05165 PF00563 EAL domain J9260_05165 PF00990 Diguanylate cyclase, GGDEF domain J9260_05170 PF04186 FxsA cytoplasmic membrane protein J9260_05175 PF00166 Chaperonin 10 Kd subunit J9260_05180 PF00118 TCP-1/cpn60 chaperonin family J9260_05185 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J9260_05190 PF01850 PIN domain J9260_05205 PF13545 Crp-like helix-turn-helix domain J9260_05205 PF00027 Cyclic nucleotide-binding domain J9260_05210 PF01654 Cytochrome bd terminal oxidase subunit I J9260_05215 PF02322 Cytochrome bd terminal oxidase subunit II J9260_05220 PF08173 Membrane bound YbgT-like protein J9260_05250 PF10502 Signal peptidase, peptidase S26 J9260_05255 PF00364 Biotin-requiring enzyme J9260_05255 PF00289 Biotin carboxylase, N-terminal domain J9260_05255 PF02436 Conserved carboxylase domain J9260_05255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9260_05255 PF02785 Biotin carboxylase C-terminal domain J9260_05255 PF00682 HMGL-like J9260_05265 PF04151 Bacterial pre-peptidase C-terminal domain J9260_05265 PF00082 Subtilase family J9260_05275 PF00512 His Kinase A (phospho-acceptor) domain J9260_05275 PF00672 HAMP domain J9260_05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_05280 PF00072 Response regulator receiver domain J9260_05280 PF00486 Transcriptional regulatory protein, C terminal J9260_05285 PF00873 AcrB/AcrD/AcrF family J9260_05295 PF08359 YsiA-like protein, C-terminal region J9260_05295 PF00440 Bacterial regulatory proteins, tetR family J9260_05300 PF06418 CTP synthase N-terminus J9260_05300 PF00117 Glutamine amidotransferase class-I J9260_05305 PF00793 DAHP synthetase I family J9260_05310 PF00113 Enolase, C-terminal TIM barrel domain J9260_05310 PF03952 Enolase, N-terminal domain J9260_05315 PF04977 Septum formation initiator J9260_05320 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J9260_05325 PF03960 ArsC family J9260_05330 PF03358 NADPH-dependent FMN reductase J9260_05340 PF02542 YgbB family J9260_05345 PF01329 Pterin 4 alpha carbinolamine dehydratase J9260_05390 PF07859 alpha/beta hydrolase fold J9260_05400 PF00749 tRNA synthetases class I (E and Q), catalytic domain J9260_05405 PF01258 Prokaryotic dksA/traR C4-type zinc finger J9260_05420 PF02785 Biotin carboxylase C-terminal domain J9260_05420 PF00289 Biotin carboxylase, N-terminal domain J9260_05420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9260_05425 PF00364 Biotin-requiring enzyme J9260_05430 PF01220 Dehydroquinase class II J9260_05435 PF05872 Bacterial protein of unknown function (DUF853) J9260_05460 PF02562 PhoH-like protein J9260_05465 PF02130 Uncharacterized protein family UPF0054 J9260_05470 PF00571 CBS domain J9260_05470 PF03471 Transporter associated domain J9260_05475 PF00795 Carbon-nitrogen hydrolase J9260_05485 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J9260_05485 PF00925 GTP cyclohydrolase II J9260_05490 PF00885 6,7-dimethyl-8-ribityllumazine synthase J9260_05495 PF01029 NusB family J9260_05505 PF08264 Anticodon-binding domain of tRNA J9260_05505 PF00133 tRNA synthetases class I (I, L, M and V) J9260_05505 PF13603 Leucyl-tRNA synthetase, Domain 2 J9260_05525 PF04055 Radical SAM superfamily J9260_05525 PF06463 Molybdenum Cofactor Synthesis C J9260_05530 PF05860 haemagglutination activity domain J9260_05530 PF03543 Yersinia/Haemophilus virulence surface antigen J9260_05530 PF02661 Fic/DOC family J9260_05530 PF13018 Extended Signal Peptide of Type V secretion system J9260_05530 PF13332 Hemagglutinin repeat J9260_05545 PF12804 MobA-like NTP transferase domain J9260_05570 PF00872 Transposase, Mutator family J9260_05600 PF02579 Dinitrogenase iron-molybdenum cofactor J9260_05600 PF04055 Radical SAM superfamily J9260_05605 PF12838 4Fe-4S dicluster domain J9260_05615 PF00258 Flavodoxin J9260_05615 PF00753 Metallo-beta-lactamase superfamily J9260_05620 PF00111 2Fe-2S iron-sulfur cluster binding domain J9260_05625 PF00111 2Fe-2S iron-sulfur cluster binding domain J9260_05635 PF04891 NifQ J9260_05640 PF03747 ADP-ribosylglycohydrolase J9260_05645 PF02082 Transcriptional regulator J9260_05650 PF01521 Iron-sulphur cluster biosynthesis J9260_05655 PF01592 NifU-like N terminal domain J9260_05655 PF04324 BFD-like [2Fe-2S] binding domain J9260_05655 PF01106 NifU-like domain J9260_05660 PF00266 Aminotransferase class-V J9260_05680 PF00005 ABC transporter J9260_05680 PF12848 ABC transporter J9260_05685 PF00270 DEAD/DEAH box helicase J9260_05685 PF04408 Helicase associated domain (HA2) J9260_05685 PF08482 ATP-dependent helicase C-terminal J9260_05685 PF00271 Helicase conserved C-terminal domain J9260_05695 PF00158 Sigma-54 interaction domain J9260_05695 PF02954 Bacterial regulatory protein, Fis family J9260_05695 PF13185 GAF domain J9260_05700 PF00989 PAS fold J9260_05700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_05705 PF02508 Rnf-Nqr subunit, membrane protein J9260_05710 PF04060 Putative Fe-S cluster J9260_05715 PF13237 4Fe-4S dicluster domain J9260_05715 PF13375 RnfC Barrel sandwich hybrid domain J9260_05715 PF10531 SLBB domain J9260_05715 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J9260_05720 PF03116 NQR2, RnfD, RnfE family J9260_05725 PF04205 FMN-binding domain J9260_05730 PF02508 Rnf-Nqr subunit, membrane protein J9260_05735 PF03658 RnfH family Ubiquitin J9260_05765 PF00665 Integrase core domain J9260_05770 PF01695 IstB-like ATP binding protein J9260_05780 PF06258 Mitochondrial fission ELM1 J9260_05785 PF07724 AAA domain (Cdc48 subfamily) J9260_05785 PF10431 C-terminal, D2-small domain, of ClpB protein J9260_05785 PF06689 ClpX C4-type zinc finger J9260_05790 PF00639 PPIC-type PPIASE domain J9260_05795 PF04319 NifZ domain J9260_05800 PF03206 Nitrogen fixation protein NifW J9260_05810 PF00472 RF-1 domain J9260_05830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9260_05830 PF00205 Thiamine pyrophosphate enzyme, central domain J9260_05830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9260_05835 PF01263 Aldose 1-epimerase J9260_05840 PF00664 ABC transporter transmembrane region J9260_05840 PF00005 ABC transporter J9260_05845 PF00664 ABC transporter transmembrane region J9260_05845 PF00005 ABC transporter J9260_05870 PF17863 AAA lid domain J9260_05870 PF07726 ATPase family associated with various cellular activities (AAA) J9260_05885 PF01741 Large-conductance mechanosensitive channel, MscL J9260_05890 PF13356 Arm DNA-binding domain J9260_05890 PF00589 Phage integrase family J9260_05895 PF17191 RecG wedge domain J9260_05895 PF00270 DEAD/DEAH box helicase J9260_05895 PF13749 Putative ATP-dependent DNA helicase recG C-terminal J9260_05910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J9260_05945 PF01751 Toprim domain J9260_05945 PF01131 DNA topoisomerase J9260_05985 PF00872 Transposase, Mutator family J9260_06010 PF04002 RadC-like JAB domain J9260_06075 PF06834 TraU protein J9260_06090 PF06986 Type-1V conjugative transfer system mating pair stabilisation J9260_06105 PF01464 Transglycosylase SLT domain J9260_06145 PF09676 Type IV conjugative transfer system lipoprotein (TraV) J9260_06170 PF06122 Conjugative relaxosome accessory transposon protein J9260_06180 PF07916 TraG-like protein, N-terminal region J9260_06200 PF00239 Resolvase, N terminal domain J9260_06200 PF02796 Helix-turn-helix domain of resolvase J9260_06215 PF02796 Helix-turn-helix domain of resolvase J9260_06215 PF00239 Resolvase, N terminal domain J9260_06230 PF00571 CBS domain J9260_06230 PF00478 IMP dehydrogenase / GMP reductase domain J9260_06235 PF00196 Bacterial regulatory proteins, luxR family J9260_06235 PF00072 Response regulator receiver domain J9260_06240 PF00672 HAMP domain J9260_06240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_06240 PF07730 Histidine kinase J9260_06240 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J9260_06245 PF07690 Major Facilitator Superfamily J9260_06250 PF07690 Major Facilitator Superfamily J9260_06255 PF04358 DsrC like protein J9260_06260 PF00384 Molybdopterin oxidoreductase J9260_06260 PF01568 Molydopterin dinucleotide binding domain J9260_06260 PF14710 Respiratory nitrate reductase alpha N-terminal J9260_06265 PF14711 Respiratory nitrate reductase beta C-terminal J9260_06265 PF13247 4Fe-4S dicluster domain J9260_06270 PF02613 Nitrate reductase delta subunit J9260_06275 PF02665 Nitrate reductase gamma subunit J9260_06280 PF03453 MoeA N-terminal region (domain I and II) J9260_06280 PF00994 Probable molybdopterin binding domain J9260_06280 PF03454 MoeA C-terminal region (domain IV) J9260_06285 PF06463 Molybdenum Cofactor Synthesis C J9260_06285 PF04055 Radical SAM superfamily J9260_06290 PF01136 Peptidase family U32 J9260_06300 PF02036 SCP-2 sterol transfer family J9260_06305 PF06968 Biotin and Thiamin Synthesis associated domain J9260_06305 PF04055 Radical SAM superfamily J9260_06310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J9260_06310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J9260_06310 PF11890 Domain of unknown function (DUF3410) J9260_06315 PF16199 Radical_SAM C-terminal domain J9260_06315 PF04055 Radical SAM superfamily J9260_06320 PF00266 Aminotransferase class-V J9260_06350 PF02597 ThiS family J9260_06365 PF03793 PASTA domain J9260_06365 PF00069 Protein kinase domain J9260_06370 PF07690 Major Facilitator Superfamily J9260_06375 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_06375 PF18267 Rubredoxin NAD+ reductase C-terminal domain J9260_06375 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J9260_06375 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J9260_06375 PF04324 BFD-like [2Fe-2S] binding domain J9260_06385 PF01568 Molydopterin dinucleotide binding domain J9260_06385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J9260_06385 PF00384 Molybdopterin oxidoreductase J9260_06390 PF09163 Formate dehydrogenase N, transmembrane J9260_06390 PF12800 4Fe-4S binding domain J9260_06390 PF13247 4Fe-4S dicluster domain J9260_06395 PF04358 DsrC like protein J9260_06410 PF00873 AcrB/AcrD/AcrF family J9260_06430 PF09828 Chromate resistance exported protein J9260_06445 PF09828 Chromate resistance exported protein J9260_06455 PF01152 Bacterial-like globin J9260_06460 PF03595 Voltage-dependent anion channel J9260_06465 PF02687 FtsX-like permease family J9260_06465 PF12704 MacB-like periplasmic core domain J9260_06465 PF00005 ABC transporter J9260_06485 PF00440 Bacterial regulatory proteins, tetR family J9260_06490 PF00092 von Willebrand factor type A domain J9260_06500 PF08406 CbbQ/NirQ/NorQ C-terminal J9260_06500 PF07728 AAA domain (dynein-related subfamily) J9260_06510 PF00510 Cytochrome c oxidase subunit III J9260_06515 PF00593 TonB dependent receptor J9260_06515 PF07715 TonB-dependent Receptor Plug Domain J9260_06520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9260_06530 PF02540 NAD synthase J9260_06530 PF00958 GMP synthase C terminal domain J9260_06530 PF00117 Glutamine amidotransferase class-I J9260_06535 PF00115 Cytochrome C and Quinol oxidase polypeptide I J9260_06540 PF00034 Cytochrome c J9260_06545 PF00150 Cellulase (glycosyl hydrolase family 5) J9260_06545 PF00331 Glycosyl hydrolase family 10 J9260_06545 PF00942 Cellulose binding domain J9260_06550 PF00440 Bacterial regulatory proteins, tetR family J9260_06585 PF08378 Nuclease-related domain J9260_06590 PF14579 Helix-hairpin-helix motif J9260_06590 PF00929 Exonuclease J9260_06590 PF02811 PHP domain J9260_06590 PF07733 Bacterial DNA polymerase III alpha NTPase domain J9260_06590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J9260_06590 PF11490 DNA polymerase III polC-type N-terminus II J9260_06600 PF06250 YhcG PDDEXK nuclease domain J9260_06600 PF17761 DUF1016 N-terminal domain J9260_06615 PF00271 Helicase conserved C-terminal domain J9260_06615 PF00176 SNF2 family N-terminal domain J9260_06620 PF00270 DEAD/DEAH box helicase J9260_06620 PF09369 Domain of unknown function (DUF1998) J9260_06620 PF00271 Helicase conserved C-terminal domain J9260_06675 PF12728 Helix-turn-helix domain J9260_06710 PF04546 Sigma-70, non-essential region J9260_06710 PF03979 Sigma-70 factor, region 1.1 J9260_06710 PF00140 Sigma-70 factor, region 1.2 J9260_06710 PF04542 Sigma-70 region 2 J9260_06710 PF04539 Sigma-70 region 3 J9260_06710 PF04545 Sigma-70, region 4 J9260_06715 PF08275 DNA primase catalytic core, N-terminal domain J9260_06715 PF10410 DnaB-helicase binding domain of primase J9260_06715 PF08278 DNA primase DnaG DnaB-binding J9260_06715 PF01807 CHC2 zinc finger J9260_06720 PF01493 GXGXG motif J9260_06720 PF00310 Glutamine amidotransferases class-II J9260_06720 PF04898 Glutamate synthase central domain J9260_06720 PF01645 Conserved region in glutamate synthase J9260_06725 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J9260_06725 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_06770 PF08502 LeuA allosteric (dimerisation) domain J9260_06770 PF00682 HMGL-like J9260_06775 PF03167 Uracil DNA glycosylase superfamily J9260_06780 PF00583 Acetyltransferase (GNAT) family J9260_06785 PF12627 Probable RNA and SrmB- binding site of polymerase A J9260_06785 PF01743 Poly A polymerase head domain J9260_06785 PF12626 Polymerase A arginine-rich C-terminus J9260_06790 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J9260_06795 PF08463 EcoEI R protein C-terminal J9260_06795 PF04851 Type III restriction enzyme, res subunit J9260_06795 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J9260_06795 PF00271 Helicase conserved C-terminal domain J9260_06805 PF12161 HsdM N-terminal domain J9260_06805 PF02384 N-6 DNA Methylase J9260_06810 PF13193 AMP-binding enzyme C-terminal domain J9260_06810 PF00501 AMP-binding enzyme J9260_06810 PF16177 Acetyl-coenzyme A synthetase N-terminus J9260_06815 PF04303 PrpF protein J9260_06820 PF00694 Aconitase C-terminal domain J9260_06820 PF00330 Aconitase family (aconitate hydratase) J9260_06825 PF00285 Citrate synthase, C-terminal domain J9260_06840 PF00117 Glutamine amidotransferase class-I J9260_06840 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J9260_06845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J9260_06845 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J9260_06845 PF02142 MGS-like domain J9260_06850 PF01272 Transcription elongation factor, GreA/GreB, C-term J9260_06850 PF03449 Transcription elongation factor, N-terminal J9260_06855 PF00300 Histidine phosphatase superfamily (branch 1) J9260_06860 PF02654 Cobalamin-5-phosphate synthase J9260_06865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J9260_06865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J9260_06865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J9260_06865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J9260_06875 PF02082 Transcriptional regulator J9260_06880 PF00149 Calcineurin-like phosphoesterase J9260_06885 PF04241 Protein of unknown function (DUF423) J9260_06890 PF04445 Putative SAM-dependent methyltransferase J9260_06895 PF04102 SlyX J9260_06900 PF00764 Arginosuccinate synthase J9260_06915 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase J9260_06915 PF09363 XFP C-terminal domain J9260_06915 PF09364 XFP N-terminal domain J9260_06920 PF00923 Transaldolase/Fructose-6-phosphate aldolase J9260_06925 PF01734 Patatin-like phospholipase J9260_06950 PF01556 DnaJ C terminal domain J9260_06950 PF00226 DnaJ domain J9260_06960 PF00690 Cation transporter/ATPase, N-terminus J9260_06960 PF00689 Cation transporting ATPase, C-terminus J9260_06965 PF00005 ABC transporter J9260_06970 PF02687 FtsX-like permease family J9260_06970 PF12704 MacB-like periplasmic core domain J9260_06975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J9260_07000 PF05532 CsbD-like J9260_07010 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J9260_07010 PF06165 Glycosyltransferase family 36 J9260_07010 PF10091 Putative glucoamylase J9260_07065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J9260_07070 PF00490 Delta-aminolevulinic acid dehydratase J9260_07075 PF02578 Multi-copper polyphenol oxidoreductase laccase J9260_07080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9260_07080 PF00005 ABC transporter J9260_07090 PF00117 Glutamine amidotransferase class-I J9260_07090 PF00958 GMP synthase C terminal domain J9260_07090 PF13673 Acetyltransferase (GNAT) domain J9260_07090 PF03352 Methyladenine glycosylase J9260_07090 PF13302 Acetyltransferase (GNAT) domain J9260_07130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J9260_07130 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J9260_07140 PF16078 2-oxoglutarate dehydrogenase N-terminus J9260_07140 PF00676 Dehydrogenase E1 component J9260_07140 PF16870 2-oxoglutarate dehydrogenase C-terminal J9260_07140 PF02779 Transketolase, pyrimidine binding domain J9260_07160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J9260_07170 PF01227 GTP cyclohydrolase I J9260_07185 PF01702 Queuine tRNA-ribosyltransferase J9260_07190 PF02754 Cysteine-rich domain J9260_07190 PF13183 4Fe-4S dicluster domain J9260_07195 PF01565 FAD binding domain J9260_07200 PF01565 FAD binding domain J9260_07200 PF02913 FAD linked oxidases, C-terminal domain J9260_07205 PF02403 Seryl-tRNA synthetase N-terminal domain J9260_07205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9260_07215 PF03129 Anticodon binding domain J9260_07215 PF02824 TGS domain J9260_07215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9260_07215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J9260_07220 PF00707 Translation initiation factor IF-3, C-terminal domain J9260_07220 PF05198 Translation initiation factor IF-3, N-terminal domain J9260_07225 PF01632 Ribosomal protein L35 J9260_07230 PF00453 Ribosomal protein L20 J9260_07235 PF01409 tRNA synthetases class II core domain (F) J9260_07235 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J9260_07240 PF03147 Ferredoxin-fold anticodon binding domain J9260_07240 PF03484 tRNA synthetase B5 domain J9260_07240 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J9260_07240 PF01588 Putative tRNA binding domain J9260_07240 PF03483 B3/4 domain J9260_07245 PF00216 Bacterial DNA-binding protein J9260_07260 PF17191 RecG wedge domain J9260_07260 PF00270 DEAD/DEAH box helicase J9260_07260 PF00271 Helicase conserved C-terminal domain J9260_07265 PF00521 DNA gyrase/topoisomerase IV, subunit A J9260_07265 PF03989 DNA gyrase C-terminal domain, beta-propeller J9260_07285 PF00266 Aminotransferase class-V J9260_07290 PF01842 ACT domain J9260_07290 PF01817 Chorismate mutase type II J9260_07290 PF00800 Prephenate dehydratase J9260_07305 PF00085 Thioredoxin J9260_07310 PF00175 Oxidoreductase NAD-binding domain J9260_07310 PF00970 Oxidoreductase FAD-binding domain J9260_07315 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J9260_07320 PF09179 TilS substrate binding domain J9260_07320 PF11734 TilS substrate C-terminal domain J9260_07320 PF01171 PP-loop family J9260_07340 PF02463 RecF/RecN/SMC N terminal domain J9260_07360 PF01336 OB-fold nucleic acid binding domain J9260_07360 PF02811 PHP domain J9260_07360 PF14579 Helix-hairpin-helix motif J9260_07360 PF07733 Bacterial DNA polymerase III alpha NTPase domain J9260_07360 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J9260_07385 PF14319 Transposase zinc-binding domain J9260_07385 PF04986 Putative transposase J9260_07390 PF00589 Phage integrase family J9260_07390 PF02899 Phage integrase, N-terminal SAM-like domain J9260_07395 PF00528 Binding-protein-dependent transport system inner membrane component J9260_07405 PF01926 50S ribosome-binding GTPase J9260_07405 PF12631 MnmE helical domain J9260_07405 PF10396 GTP-binding protein TrmE N-terminus J9260_07415 PF10609 NUBPL iron-transfer P-loop NTPase J9260_07425 PF00692 dUTPase J9260_07430 PF00465 Iron-containing alcohol dehydrogenase J9260_07445 PF00905 Penicillin binding protein transpeptidase domain J9260_07445 PF14814 Bifunctional transglycosylase second domain J9260_07445 PF00912 Transglycosylase J9260_07455 PF13307 Helicase C-terminal domain J9260_07455 PF04851 Type III restriction enzyme, res subunit J9260_07460 PF00814 Glycoprotease family J9260_07465 PF04055 Radical SAM superfamily J9260_07490 PF00528 Binding-protein-dependent transport system inner membrane component J9260_07495 PF03459 TOBE domain J9260_07495 PF00005 ABC transporter J9260_07510 PF02769 AIR synthase related protein, C-terminal domain J9260_07510 PF00586 AIR synthase related protein, N-terminal domain J9260_07525 PF00696 Amino acid kinase family J9260_07535 PF00692 dUTPase J9260_07540 PF04127 DNA / pantothenate metabolism flavoprotein J9260_07540 PF02441 Flavoprotein J9260_07545 PF04002 RadC-like JAB domain J9260_07550 PF01565 FAD binding domain J9260_07550 PF08031 Berberine and berberine like J9260_07565 PF02463 RecF/RecN/SMC N terminal domain J9260_07565 PF06470 SMC proteins Flexible Hinge Domain J9260_07570 PF04354 ZipA, C-terminal FtsZ-binding domain J9260_07575 PF00005 ABC transporter J9260_07575 PF08402 TOBE domain J9260_07580 PF00528 Binding-protein-dependent transport system inner membrane component J9260_07585 PF13416 Bacterial extracellular solute-binding protein J9260_07590 PF16363 GDP-mannose 4,6 dehydratase J9260_07605 PF03738 Glutathionylspermidine synthase preATP-grasp J9260_07620 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J9260_07620 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J9260_07625 PF10369 Small subunit of acetolactate synthase J9260_07630 PF00205 Thiamine pyrophosphate enzyme, central domain J9260_07630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J9260_07630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J9260_07635 PF00263 Bacterial type II and III secretion system protein J9260_07635 PF03958 Bacterial type II/III secretion system short domain J9260_07640 PF00437 Type II/IV secretion system protein J9260_07645 PF00482 Type II secretion system (T2SS), protein F J9260_07650 PF01624 MutS domain I J9260_07650 PF05188 MutS domain II J9260_07650 PF05192 MutS domain III J9260_07650 PF05190 MutS family domain IV J9260_07650 PF00488 MutS domain V J9260_07665 PF08011 PD-(D/E)XK nuclease superfamily J9260_07665 PF09820 Predicted AAA-ATPase J9260_07675 PF00485 Phosphoribulokinase / Uridine kinase family J9260_07680 PF00890 FAD binding domain J9260_07680 PF02910 Fumarate reductase flavoprotein C-term J9260_07685 PF08281 Sigma-70, region 4 J9260_07685 PF04542 Sigma-70 region 2 J9260_07705 PF13180 PDZ domain J9260_07715 PF00679 Elongation factor G C-terminus J9260_07715 PF00009 Elongation factor Tu GTP binding domain J9260_07715 PF03144 Elongation factor Tu domain 2 J9260_07715 PF06421 GTP-binding protein LepA C-terminus J9260_07720 PF10502 Signal peptidase, peptidase S26 J9260_07730 PF00035 Double-stranded RNA binding motif J9260_07730 PF14622 Ribonuclease-III-like J9260_07735 PF01926 50S ribosome-binding GTPase J9260_07735 PF07650 KH domain J9260_07740 PF02565 Recombination protein O C terminal J9260_07740 PF11967 Recombination protein O N terminal J9260_07745 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J9260_07750 PF01648 4'-phosphopantetheinyl transferase superfamily J9260_07755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_07755 PF00512 His Kinase A (phospho-acceptor) domain J9260_07755 PF01627 Hpt domain J9260_07755 PF00072 Response regulator receiver domain J9260_07760 PF00291 Pyridoxal-phosphate dependent enzyme J9260_07770 PF00089 Trypsin J9260_07775 PF00294 pfkB family carbohydrate kinase J9260_07785 PF02899 Phage integrase, N-terminal SAM-like domain J9260_07785 PF00589 Phage integrase family J9260_07790 PF05378 Hydantoinase/oxoprolinase N-terminal region J9260_07790 PF01968 Hydantoinase/oxoprolinase J9260_07795 PF03781 Sulfatase-modifying factor enzyme 1 J9260_07800 PF03330 Lytic transglycolase J9260_07800 PF05036 Sporulation related domain J9260_07810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J9260_07810 PF00072 Response regulator receiver domain J9260_07810 PF01627 Hpt domain J9260_07810 PF00512 His Kinase A (phospho-acceptor) domain J9260_07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_07810 PF00672 HAMP domain J9260_07875 PF03150 Di-haem cytochrome c peroxidase J9260_07880 PF00512 His Kinase A (phospho-acceptor) domain J9260_07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_07880 PF00672 HAMP domain J9260_07880 PF16527 Two-component sensor protein CpxA, periplasmic domain J9260_07885 PF00486 Transcriptional regulatory protein, C terminal J9260_07885 PF00072 Response regulator receiver domain J9260_07905 PF02321 Outer membrane efflux protein J9260_07910 PF00529 HlyD membrane-fusion protein of T1SS J9260_07910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J9260_07915 PF00005 ABC transporter J9260_07915 PF02687 FtsX-like permease family J9260_07915 PF12704 MacB-like periplasmic core domain J9260_07920 PF12704 MacB-like periplasmic core domain J9260_07920 PF00005 ABC transporter J9260_07920 PF02687 FtsX-like permease family J9260_07925 PF00581 Rhodanese-like domain J9260_07930 PF01169 Uncharacterized protein family UPF0016 J9260_07935 PF10672 S-adenosylmethionine-dependent methyltransferase J9260_07935 PF01170 Putative RNA methylase family UPF0020 J9260_07935 PF02926 THUMP domain J9260_07945 PF02938 GAD domain J9260_07945 PF01336 OB-fold nucleic acid binding domain J9260_07945 PF00152 tRNA synthetases class II (D, K and N) J9260_07960 PF00106 short chain dehydrogenase J9260_07975 PF09115 DNA polymerase III, delta subunit, C terminal J9260_07980 PF02223 Thymidylate kinase J9260_07985 PF02618 YceG-like family J9260_07990 PF01063 Amino-transferase class IV J9260_07995 PF04715 Anthranilate synthase component I, N terminal region J9260_07995 PF00425 chorismate binding enzyme J9260_08000 PF00109 Beta-ketoacyl synthase, N-terminal domain J9260_08000 PF02801 Beta-ketoacyl synthase, C-terminal domain J9260_08005 PF00550 Phosphopantetheine attachment site J9260_08015 PF00698 Acyl transferase domain J9260_08020 PF01176 Translation initiation factor 1A / IF-1 J9260_08025 PF00004 ATPase family associated with various cellular activities (AAA) J9260_08025 PF07724 AAA domain (Cdc48 subfamily) J9260_08025 PF17871 AAA lid domain J9260_08025 PF02861 Clp amino terminal domain, pathogenicity island component J9260_08025 PF10431 C-terminal, D2-small domain, of ClpB protein J9260_08030 PF02617 ATP-dependent Clp protease adaptor protein ClpS J9260_08035 PF00293 NUDIX domain J9260_08045 PF04356 Protein of unknown function (DUF489) J9260_08050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J9260_08055 PF18073 Rubredoxin metal binding domain J9260_08060 PF00216 Bacterial DNA-binding protein J9260_08065 PF00575 S1 RNA binding domain J9260_08070 PF02224 Cytidylate kinase J9260_08075 PF14489 QueF-like protein J9260_08100 PF01882 Protein of unknown function DUF58 J9260_08105 PF07726 ATPase family associated with various cellular activities (AAA) J9260_08105 PF17863 AAA lid domain J9260_08110 PF01722 BolA-like protein J9260_08120 PF00005 ABC transporter J9260_08120 PF12704 MacB-like periplasmic core domain J9260_08120 PF02687 FtsX-like permease family J9260_08125 PF12704 MacB-like periplasmic core domain J9260_08125 PF02687 FtsX-like permease family J9260_08125 PF00005 ABC transporter J9260_08130 PF00005 ABC transporter J9260_08130 PF02687 FtsX-like permease family J9260_08130 PF12704 MacB-like periplasmic core domain J9260_08150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J9260_08150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J9260_08165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J9260_08165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J9260_08170 PF12419 SNF2 Helicase protein J9260_08170 PF00271 Helicase conserved C-terminal domain J9260_08170 PF00176 SNF2 family N-terminal domain J9260_08180 PF00196 Bacterial regulatory proteins, luxR family J9260_08180 PF00072 Response regulator receiver domain J9260_08185 PF08448 PAS fold J9260_08185 PF03705 CheR methyltransferase, all-alpha domain J9260_08185 PF01739 CheR methyltransferase, SAM binding domain J9260_08185 PF01339 CheB methylesterase J9260_08195 PF12849 PBP superfamily domain J9260_08200 PF00486 Transcriptional regulatory protein, C terminal J9260_08200 PF00072 Response regulator receiver domain J9260_08205 PF00534 Glycosyl transferases group 1 J9260_08205 PF13439 Glycosyltransferase Family 4 J9260_08210 PF01569 PAP2 superfamily J9260_08220 PF00271 Helicase conserved C-terminal domain J9260_08220 PF00270 DEAD/DEAH box helicase J9260_08225 PF01928 CYTH domain J9260_08230 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J9260_08230 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J9260_08235 PF02504 Fatty acid synthesis protein J9260_08240 PF01783 Ribosomal L32p protein family J9260_08250 PF02545 Maf-like protein J9260_08265 PF08501 Shikimate dehydrogenase substrate binding domain J9260_08265 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J9260_08265 PF01488 Shikimate / quinate 5-dehydrogenase J9260_08270 PF00565 Staphylococcal nuclease homologue J9260_08305 PF01740 STAS domain J9260_08305 PF13426 PAS domain J9260_08330 PF09611 CRISPR-associated protein (Cas_Csy1) J9260_08335 PF18019 HD domain J9260_08340 PF01867 CRISPR associated protein Cas1 J9260_08350 PF00586 AIR synthase related protein, N-terminal domain J9260_08350 PF02769 AIR synthase related protein, C-terminal domain J9260_08355 PF00551 Formyl transferase J9260_08360 PF06865 Pyrimidine/purine nucleoside phosphorylase J9260_08365 PF01523 Putative modulator of DNA gyrase J9260_08370 PF01523 Putative modulator of DNA gyrase J9260_08375 PF00795 Carbon-nitrogen hydrolase J9260_08385 PF10150 Ribonuclease E/G family J9260_08385 PF00575 S1 RNA binding domain J9260_08390 PF02545 Maf-like protein J9260_08395 PF02590 Predicted SPOUT methyltransferase J9260_08405 PF01467 Cytidylyltransferase-like J9260_08415 PF01546 Peptidase family M20/M25/M40 J9260_08415 PF07687 Peptidase dimerisation domain J9260_08420 PF00180 Isocitrate/isopropylmalate dehydrogenase J9260_08440 PF09397 Ftsk gamma domain J9260_08440 PF01580 FtsK/SpoIIIE family J9260_08440 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J9260_08440 PF17854 FtsK alpha domain J9260_08450 PF05681 Fumarate hydratase (Fumerase) J9260_08450 PF05683 Fumarase C-terminus J9260_08455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J9260_08455 PF00005 ABC transporter J9260_08460 PF01008 Initiation factor 2 subunit family J9260_08465 PF01979 Amidohydrolase family J9260_08485 PF08003 Protein of unknown function (DUF1698) J9260_08490 PF13649 Methyltransferase domain J9260_08500 PF00183 Hsp90 protein J9260_08500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_08505 PF02965 Vitamin B12 dependent methionine synthase, activation domain J9260_08505 PF02607 B12 binding domain J9260_08505 PF02310 B12 binding domain J9260_08505 PF02574 Homocysteine S-methyltransferase J9260_08505 PF00809 Pterin binding enzyme J9260_08540 PF08406 CbbQ/NirQ/NorQ C-terminal J9260_08540 PF07728 AAA domain (dynein-related subfamily) J9260_08550 PF00101 Ribulose bisphosphate carboxylase, small chain J9260_08555 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain J9260_08555 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain J9260_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9260_08560 PF03466 LysR substrate binding domain J9260_08565 PF01593 Flavin containing amine oxidoreductase J9260_08585 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J9260_08605 PF02769 AIR synthase related protein, C-terminal domain J9260_08605 PF00586 AIR synthase related protein, N-terminal domain J9260_08610 PF00677 Lumazine binding domain J9260_08620 PF01555 DNA methylase J9260_08625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J9260_08625 PF01872 RibD C-terminal domain J9260_08630 PF03477 ATP cone domain J9260_08635 PF00464 Serine hydroxymethyltransferase J9260_08645 PF01510 N-acetylmuramoyl-L-alanine amidase J9260_08655 PF02463 RecF/RecN/SMC N terminal domain J9260_08665 PF00580 UvrD/REP helicase N-terminal domain J9260_08665 PF13361 UvrD-like helicase C-terminal domain J9260_08670 PF00156 Phosphoribosyl transferase domain J9260_08675 PF02666 Phosphatidylserine decarboxylase J9260_08680 PF05175 Methyltransferase small domain J9260_08685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9260_08685 PF03466 LysR substrate binding domain J9260_08690 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain J9260_08690 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain J9260_08695 PF08406 CbbQ/NirQ/NorQ C-terminal J9260_08695 PF07728 AAA domain (dynein-related subfamily) J9260_08700 PF00092 von Willebrand factor type A domain J9260_08710 PF00872 Transposase, Mutator family J9260_08735 PF01906 Putative heavy-metal-binding J9260_08740 PF02230 Phospholipase/Carboxylesterase J9260_08765 PF02347 Glycine cleavage system P-protein J9260_08770 PF01597 Glycine cleavage H-protein J9260_08775 PF08669 Glycine cleavage T-protein C-terminal barrel domain J9260_08775 PF01571 Aminomethyltransferase folate-binding domain J9260_08805 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J9260_08810 PF00361 Proton-conducting membrane transporter J9260_08815 PF00146 NADH dehydrogenase J9260_08820 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J9260_08825 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J9260_08825 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J9260_08830 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J9260_08835 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J9260_08835 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J9260_08835 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_08860 PF02470 MlaD protein J9260_08875 PF00034 Cytochrome c J9260_08875 PF03150 Di-haem cytochrome c peroxidase J9260_08880 PF10411 Disulfide bond isomerase protein N-terminus J9260_08880 PF13098 Thioredoxin-like domain J9260_08885 PF08212 Lipocalin-like domain J9260_08905 PF03109 ABC1 family J9260_08910 PF08463 EcoEI R protein C-terminal J9260_08910 PF00271 Helicase conserved C-terminal domain J9260_08910 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) J9260_08910 PF04851 Type III restriction enzyme, res subunit J9260_08930 PF12161 HsdM N-terminal domain J9260_08930 PF02384 N-6 DNA Methylase J9260_08955 PF00334 Nucleoside diphosphate kinase J9260_08960 PF04055 Radical SAM superfamily J9260_08980 PF03129 Anticodon binding domain J9260_08980 PF13393 Histidyl-tRNA synthetase J9260_08985 PF09976 Tetratricopeptide repeat-like domain J9260_08990 PF13360 PQQ-like domain J9260_09005 PF02885 Glycosyl transferase family, helical bundle domain J9260_09005 PF00591 Glycosyl transferase family, a/b domain J9260_09010 PF00218 Indole-3-glycerol phosphate synthase J9260_09015 PF01790 Prolipoprotein diacylglyceryl transferase J9260_09020 PF00303 Thymidylate synthase J9260_09025 PF04204 Homoserine O-succinyltransferase J9260_09035 PF17961 Bacterial Ig domain J9260_09035 PF10425 C-terminus of bacterial fibrinogen-binding adhesin J9260_09035 PF04650 YSIRK type signal peptide J9260_09035 PF00746 LPXTG cell wall anchor motif J9260_09035 PF17210 SdrD B-like domain J9260_09070 PF00331 Glycosyl hydrolase family 10 J9260_09070 PF00942 Cellulose binding domain J9260_09070 PF00150 Cellulase (glycosyl hydrolase family 5) J9260_09075 PF09828 Chromate resistance exported protein J9260_09090 PF09828 Chromate resistance exported protein J9260_09100 PF00753 Metallo-beta-lactamase superfamily J9260_09100 PF00581 Rhodanese-like domain J9260_09105 PF00581 Rhodanese-like domain J9260_09110 PF07690 Major Facilitator Superfamily J9260_09115 PF17863 AAA lid domain J9260_09115 PF07726 ATPase family associated with various cellular activities (AAA) J9260_09125 PF04371 Porphyromonas-type peptidyl-arginine deiminase J9260_09135 PF00092 von Willebrand factor type A domain J9260_09140 PF13519 von Willebrand factor type A domain J9260_09155 PF06463 Molybdenum Cofactor Synthesis C J9260_09155 PF04055 Radical SAM superfamily J9260_09160 PF09312 SurA N-terminal domain J9260_09160 PF00639 PPIC-type PPIASE domain J9260_09165 PF02665 Nitrate reductase gamma subunit J9260_09170 PF02613 Nitrate reductase delta subunit J9260_09175 PF14711 Respiratory nitrate reductase beta C-terminal J9260_09175 PF13247 4Fe-4S dicluster domain J9260_09180 PF14710 Respiratory nitrate reductase alpha N-terminal J9260_09180 PF01568 Molydopterin dinucleotide binding domain J9260_09180 PF00384 Molybdopterin oxidoreductase J9260_09185 PF04358 DsrC like protein J9260_09190 PF07690 Major Facilitator Superfamily J9260_09195 PF07690 Major Facilitator Superfamily J9260_09210 PF00009 Elongation factor Tu GTP binding domain J9260_09210 PF03144 Elongation factor Tu domain 2 J9260_09210 PF14492 Elongation Factor G, domain II J9260_09210 PF03764 Elongation factor G, domain IV J9260_09210 PF00679 Elongation factor G C-terminus J9260_09215 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J9260_09215 PF07730 Histidine kinase J9260_09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_09215 PF00672 HAMP domain J9260_09220 PF00196 Bacterial regulatory proteins, luxR family J9260_09220 PF00072 Response regulator receiver domain J9260_09225 PF00571 CBS domain J9260_09230 PF04324 BFD-like [2Fe-2S] binding domain J9260_09230 PF00384 Molybdopterin oxidoreductase J9260_09230 PF01568 Molydopterin dinucleotide binding domain J9260_09230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J9260_09240 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J9260_09240 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J9260_09240 PF18267 Rubredoxin NAD+ reductase C-terminal domain J9260_09240 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_09240 PF04324 BFD-like [2Fe-2S] binding domain J9260_09250 PF04539 Sigma-70 region 3 J9260_09250 PF04542 Sigma-70 region 2 J9260_09250 PF03979 Sigma-70 factor, region 1.1 J9260_09250 PF00140 Sigma-70 factor, region 1.2 J9260_09250 PF04545 Sigma-70, region 4 J9260_09255 PF00872 Transposase, Mutator family J9260_09265 PF09335 SNARE associated Golgi protein J9260_09270 PF00005 ABC transporter J9260_09275 PF00528 Binding-protein-dependent transport system inner membrane component J9260_09280 PF00005 ABC transporter J9260_09285 PF00005 ABC transporter J9260_09290 PF00072 Response regulator receiver domain J9260_09290 PF03861 ANTAR domain J9260_09315 PF00873 AcrB/AcrD/AcrF family J9260_09320 PF09371 Tex-like protein N-terminal domain J9260_09320 PF00575 S1 RNA binding domain J9260_09320 PF17674 HHH domain J9260_09320 PF16921 Tex protein YqgF-like domain J9260_09345 PF08206 Ribonuclease B OB domain J9260_09345 PF17876 Cold shock domain J9260_09345 PF08461 Ribonuclease R winged-helix domain J9260_09345 PF00773 RNB domain J9260_09345 PF00575 S1 RNA binding domain J9260_09350 PF00588 SpoU rRNA Methylase family J9260_09350 PF08032 RNA 2'-O ribose methyltransferase substrate binding J9260_09365 PF02646 RmuC family J9260_09370 PF03776 Septum formation topological specificity factor MinE J9260_09375 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J9260_09380 PF03775 Septum formation inhibitor MinC, C-terminal domain J9260_09380 PF05209 Septum formation inhibitor MinC, N-terminal domain J9260_09390 PF02559 CarD-like/TRCF domain J9260_09390 PF00271 Helicase conserved C-terminal domain J9260_09390 PF03461 TRCF domain J9260_09390 PF17757 UvrB interaction domain J9260_09390 PF00270 DEAD/DEAH box helicase J9260_09415 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system J9260_09420 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA J9260_09425 PF00132 Bacterial transferase hexapeptide (six repeats) J9260_09430 PF01351 Ribonuclease HII J9260_09445 PF02684 Lipid-A-disaccharide synthetase J9260_09450 PF00132 Bacterial transferase hexapeptide (six repeats) J9260_09450 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J9260_09455 PF07977 FabA-like domain J9260_09460 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J9260_09460 PF00132 Bacterial transferase hexapeptide (six repeats) J9260_09470 PF07244 Surface antigen variable number repeat J9260_09470 PF01103 Surface antigen J9260_09475 PF02163 Peptidase family M50 J9260_09475 PF17820 PDZ domain J9260_09480 PF13288 DXP reductoisomerase C-terminal domain J9260_09480 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J9260_09480 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J9260_09490 PF01255 Putative undecaprenyl diphosphate synthase J9260_09495 PF01765 Ribosome recycling factor J9260_09500 PF00696 Amino acid kinase family J9260_09505 PF05728 Uncharacterised protein family (UPF0227) J9260_09510 PF01628 HrcA protein C terminal domain J9260_09510 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J9260_09515 PF01513 ATP-NAD kinase J9260_09520 PF02463 RecF/RecN/SMC N terminal domain J9260_09530 PF00581 Rhodanese-like domain J9260_09535 PF00196 Bacterial regulatory proteins, luxR family J9260_09535 PF00072 Response regulator receiver domain J9260_09540 PF00672 HAMP domain J9260_09540 PF07730 Histidine kinase J9260_09540 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J9260_09540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_09545 PF01521 Iron-sulphur cluster biosynthesis J9260_09550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J9260_09550 PF07685 CobB/CobQ-like glutamine amidotransferase domain J9260_09565 PF00872 Transposase, Mutator family J9260_09580 PF00589 Phage integrase family J9260_09580 PF02899 Phage integrase, N-terminal SAM-like domain J9260_09585 PF04986 Putative transposase J9260_09585 PF14319 Transposase zinc-binding domain J9260_09625 PF13361 UvrD-like helicase C-terminal domain J9260_09625 PF00580 UvrD/REP helicase N-terminal domain J9260_09625 PF12705 PD-(D/E)XK nuclease superfamily J9260_09655 PF01048 Phosphorylase superfamily J9260_09660 PF00156 Phosphoribosyl transferase domain J9260_09670 PF00933 Glycosyl hydrolase family 3 N terminal domain J9260_09680 PF01180 Dihydroorotate dehydrogenase J9260_09695 PF13847 Methyltransferase domain J9260_09695 PF10119 Predicted methyltransferase regulatory domain J9260_09705 PF02789 Cytosol aminopeptidase family, N-terminal domain J9260_09705 PF00883 Cytosol aminopeptidase family, catalytic domain J9260_09725 PF05736 OprF membrane domain J9260_09725 PF00691 OmpA family J9260_09740 PF00132 Bacterial transferase hexapeptide (six repeats) J9260_09745 PF00682 HMGL-like J9260_09755 PF00462 Glutaredoxin J9260_09780 PF00148 Nitrogenase component 1 type Oxidoreductase J9260_09785 PF00148 Nitrogenase component 1 type Oxidoreductase J9260_09790 PF02579 Dinitrogenase iron-molybdenum cofactor J9260_09800 PF03270 Protein of unknown function, DUF269 J9260_09810 PF12838 4Fe-4S dicluster domain J9260_09840 PF00258 Flavodoxin J9260_09865 PF02579 Dinitrogenase iron-molybdenum cofactor J9260_09865 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal J9260_09870 PF00037 4Fe-4S binding domain J9260_09880 PF00148 Nitrogenase component 1 type Oxidoreductase J9260_09880 PF11844 Domain of unknown function (DUF3364) J9260_09885 PF00148 Nitrogenase component 1 type Oxidoreductase J9260_09890 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family J9260_09895 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) J9260_09910 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding J9260_09910 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_09910 PF10518 TAT (twin-arginine translocation) pathway signal sequence J9260_09915 PF12823 Domain of unknown function (DUF3817) J9260_09925 PF00027 Cyclic nucleotide-binding domain J9260_09925 PF13545 Crp-like helix-turn-helix domain J9260_09950 PF14319 Transposase zinc-binding domain J9260_09950 PF04986 Putative transposase J9260_09955 PF02899 Phage integrase, N-terminal SAM-like domain J9260_09955 PF00589 Phage integrase family J9260_09970 PF00034 Cytochrome c J9260_09975 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_09975 PF10518 TAT (twin-arginine translocation) pathway signal sequence J9260_09975 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding J9260_09995 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J9260_09995 PF00355 Rieske [2Fe-2S] domain J9260_10005 PF00561 alpha/beta hydrolase fold J9260_10010 PF10417 C-terminal domain of 1-Cys peroxiredoxin J9260_10010 PF00578 AhpC/TSA family J9260_10015 PF00578 AhpC/TSA family J9260_10025 PF13247 4Fe-4S dicluster domain J9260_10030 PF00384 Molybdopterin oxidoreductase J9260_10030 PF10518 TAT (twin-arginine translocation) pathway signal sequence J9260_10030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J9260_10030 PF01568 Molydopterin dinucleotide binding domain J9260_10050 PF04073 Aminoacyl-tRNA editing domain J9260_10050 PF03129 Anticodon binding domain J9260_10050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J9260_10055 PF02142 MGS-like domain J9260_10055 PF01808 AICARFT/IMPCHase bienzyme J9260_10065 PF04377 Arginine-tRNA-protein transferase, C terminus J9260_10065 PF04376 Arginine-tRNA-protein transferase, N terminus J9260_10070 PF00325 Bacterial regulatory proteins, crp family J9260_10070 PF00027 Cyclic nucleotide-binding domain J9260_10075 PF00436 Single-strand binding protein family J9260_10080 PF07690 Major Facilitator Superfamily J9260_10085 PF08349 Protein of unknown function (DUF1722) J9260_10090 PF12795 Mechanosensitive ion channel porin domain J9260_10090 PF12794 Mechanosensitive ion channel inner membrane domain 1 J9260_10090 PF00924 Mechanosensitive ion channel J9260_10100 PF05973 Phage derived protein Gp49-like (DUF891) J9260_10105 PF01381 Helix-turn-helix J9260_10110 PF00005 ABC transporter J9260_10110 PF08402 TOBE domain J9260_10120 PF14437 MafB19-like deaminase J9260_10130 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system J9260_10155 PF03971 Monomeric isocitrate dehydrogenase J9260_10160 PF04371 Porphyromonas-type peptidyl-arginine deiminase J9260_10165 PF00795 Carbon-nitrogen hydrolase J9260_10190 PF00005 ABC transporter J9260_10190 PF00664 ABC transporter transmembrane region J9260_10195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_10195 PF00512 His Kinase A (phospho-acceptor) domain J9260_10195 PF01627 Hpt domain J9260_10195 PF00072 Response regulator receiver domain J9260_10195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J9260_10195 PF00672 HAMP domain J9260_10205 PF03350 Uncharacterized protein family, UPF0114 J9260_10235 PF03848 Tellurite resistance protein TehB J9260_10245 PF00871 Acetokinase family J9260_10250 PF01515 Phosphate acetyl/butaryl transferase J9260_10250 PF07085 DRTGG domain J9260_10255 PF00400 WD domain, G-beta repeat J9260_10255 PF12894 Anaphase-promoting complex subunit 4 WD40 domain J9260_10280 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system J9260_10285 PF02540 NAD synthase J9260_10285 PF00958 GMP synthase C terminal domain J9260_10285 PF00117 Glutamine amidotransferase class-I J9260_10290 PF00571 CBS domain J9260_10290 PF00478 IMP dehydrogenase / GMP reductase domain J9260_10300 PF13742 OB-fold nucleic acid binding domain J9260_10300 PF02601 Exonuclease VII, large subunit J9260_10325 PF03880 DbpA RNA binding domain J9260_10325 PF00271 Helicase conserved C-terminal domain J9260_10325 PF00270 DEAD/DEAH box helicase J9260_10330 PF00255 Glutathione peroxidase J9260_10350 PF00204 DNA gyrase B J9260_10350 PF00986 DNA gyrase B subunit, carboxyl terminus J9260_10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_10350 PF01751 Toprim domain J9260_10355 PF09997 Predicted membrane protein (DUF2238) J9260_10370 PF08011 PD-(D/E)XK nuclease superfamily J9260_10370 PF09820 Predicted AAA-ATPase J9260_10380 PF01555 DNA methylase J9260_10415 PF14403 Circularly permuted ATP-grasp type 2 J9260_10425 PF00149 Calcineurin-like phosphoesterase J9260_10430 PF06071 Protein of unknown function (DUF933) J9260_10430 PF01926 50S ribosome-binding GTPase J9260_10435 PF01195 Peptidyl-tRNA hydrolase J9260_10440 PF01386 Ribosomal L25p family J9260_10440 PF14693 Ribosomal protein TL5, C-terminal domain J9260_10445 PF14572 Phosphoribosyl synthetase-associated domain J9260_10445 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J9260_10460 PF00288 GHMP kinases N terminal domain J9260_10460 PF08544 GHMP kinases C terminal J9260_10465 PF03550 Outer membrane lipoprotein LolB J9260_10475 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J9260_10475 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J9260_10475 PF01488 Shikimate / quinate 5-dehydrogenase J9260_10480 PF00472 RF-1 domain J9260_10480 PF03462 PCRF domain J9260_10485 PF13847 Methyltransferase domain J9260_10485 PF17827 PrmC N-terminal domain J9260_10495 PF05567 Neisseria PilC beta-propeller domain J9260_10500 PF05567 Neisseria PilC beta-propeller domain J9260_10505 PF07963 Prokaryotic N-terminal methylation motif J9260_10505 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor J9260_10525 PF00994 Probable molybdopterin binding domain J9260_10530 PF01435 Peptidase family M48 J9260_10535 PF03989 DNA gyrase C-terminal domain, beta-propeller J9260_10535 PF00521 DNA gyrase/topoisomerase IV, subunit A J9260_10555 PF00533 BRCA1 C Terminus (BRCT) domain J9260_10555 PF01653 NAD-dependent DNA ligase adenylation domain J9260_10555 PF03120 NAD-dependent DNA ligase OB-fold domain J9260_10555 PF12826 Helix-hairpin-helix motif J9260_10555 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J9260_10560 PF00270 DEAD/DEAH box helicase J9260_10560 PF13749 Putative ATP-dependent DNA helicase recG C-terminal J9260_10560 PF17191 RecG wedge domain J9260_10565 PF05958 tRNA (Uracil-5-)-methyltransferase J9260_10570 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_10570 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding J9260_10570 PF10518 TAT (twin-arginine translocation) pathway signal sequence J9260_10585 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J9260_10585 PF01565 FAD binding domain J9260_10590 PF00849 RNA pseudouridylate synthase J9260_10595 PF01209 ubiE/COQ5 methyltransferase family J9260_10605 PF01588 Putative tRNA binding domain J9260_10605 PF09334 tRNA synthetases class I (M) J9260_10615 PF04381 Putative exonuclease, RdgC J9260_10635 PF02082 Transcriptional regulator J9260_10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9260_10640 PF03466 LysR substrate binding domain J9260_10650 PF00899 ThiF family J9260_10655 PF01557 Fumarylacetoacetate (FAA) hydrolase family J9260_10660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9260_10660 PF03466 LysR substrate binding domain J9260_10670 PF01381 Helix-turn-helix J9260_10675 PF05973 Phage derived protein Gp49-like (DUF891) J9260_10720 PF14319 Transposase zinc-binding domain J9260_10720 PF04986 Putative transposase J9260_10725 PF00589 Phage integrase family J9260_10725 PF02899 Phage integrase, N-terminal SAM-like domain J9260_10730 PF13495 Phage integrase, N-terminal SAM-like domain J9260_10730 PF00589 Phage integrase family J9260_10740 PF00529 HlyD membrane-fusion protein of T1SS J9260_10740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J9260_10750 PF03631 Virulence factor BrkB J9260_10780 PF02599 Global regulator protein family J9260_10785 PF01842 ACT domain J9260_10785 PF00696 Amino acid kinase family J9260_10785 PF13840 ACT domain J9260_10790 PF02272 DHHA1 domain J9260_10790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J9260_10790 PF01411 tRNA synthetases class II (A) J9260_10795 PF02631 RecX family J9260_10805 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J9260_10805 PF00561 alpha/beta hydrolase fold J9260_10810 PF02464 Competence-damaged protein J9260_10815 PF06965 Na+/H+ antiporter 1 J9260_10815 PF01343 Peptidase family S49 J9260_10820 PF13419 Haloacid dehalogenase-like hydrolase J9260_10825 PF00849 RNA pseudouridylate synthase J9260_10825 PF01479 S4 domain J9260_10830 PF12111 Polyribonucleotide phosphorylase C terminal J9260_10830 PF10150 Ribonuclease E/G family J9260_10830 PF00575 S1 RNA binding domain J9260_10835 PF01451 Low molecular weight phosphotyrosine protein phosphatase J9260_10885 PF13419 Haloacid dehalogenase-like hydrolase J9260_10905 PF00591 Glycosyl transferase family, a/b domain J9260_10905 PF02885 Glycosyl transferase family, helical bundle domain J9260_10915 PF02261 Aspartate decarboxylase J9260_10920 PF02569 Pantoate-beta-alanine ligase J9260_10925 PF02548 Ketopantoate hydroxymethyltransferase J9260_10930 PF04079 Segregation and condensation complex subunit ScpB J9260_10955 PF00872 Transposase, Mutator family J9260_10975 PF00872 Transposase, Mutator family J9260_10995 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J9260_11000 PF00561 alpha/beta hydrolase fold J9260_11010 PF02803 Thiolase, C-terminal domain J9260_11010 PF00108 Thiolase, N-terminal domain J9260_11015 PF00106 short chain dehydrogenase J9260_11020 PF05233 PHB accumulation regulatory domain J9260_11020 PF07879 PHB/PHA accumulation regulator DNA-binding domain J9260_11025 PF00210 Ferritin-like domain J9260_11030 PF13180 PDZ domain J9260_11045 PF05816 Toxic anion resistance protein (TelA) J9260_11065 PF04358 DsrC like protein J9260_11070 PF00877 NlpC/P60 family J9260_11075 PF01476 LysM domain J9260_11215 PF00872 Transposase, Mutator family J9260_11220 PF00872 Transposase, Mutator family J9260_11240 PF00180 Isocitrate/isopropylmalate dehydrogenase J9260_11245 PF12344 Ultra-violet resistance protein B J9260_11245 PF00271 Helicase conserved C-terminal domain J9260_11245 PF04851 Type III restriction enzyme, res subunit J9260_11245 PF17757 UvrB interaction domain J9260_11245 PF02151 UvrB/uvrC motif J9260_11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9260_11255 PF03466 LysR substrate binding domain J9260_11260 PF03597 Cytochrome oxidase maturation protein cbb3-type J9260_11275 PF12801 4Fe-4S binding domain J9260_11275 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J9260_11275 PF13746 4Fe-4S dicluster domain J9260_11280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9260_11280 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J9260_11295 PF00115 Cytochrome C and Quinol oxidase polypeptide I J9260_11300 PF01219 Prokaryotic diacylglycerol kinase J9260_11330 PF01555 DNA methylase J9260_11335 PF00815 Histidinol dehydrogenase J9260_11340 PF00793 DAHP synthetase I family J9260_11345 PF01634 ATP phosphoribosyltransferase J9260_11350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J9260_11355 PF00331 Glycosyl hydrolase family 10 J9260_11355 PF00395 S-layer homology domain J9260_11355 PF02018 Carbohydrate binding domain J9260_11355 PF06452 Carbohydrate family 9 binding domain-like J9260_11365 PF00291 Pyridoxal-phosphate dependent enzyme J9260_11380 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J9260_11380 PF00749 tRNA synthetases class I (E and Q), catalytic domain J9260_11390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J9260_11395 PF08328 Adenylosuccinate lyase C-terminal J9260_11395 PF00206 Lyase J9260_11400 PF08007 Cupin superfamily protein J9260_11410 PF00072 Response regulator receiver domain J9260_11410 PF00486 Transcriptional regulatory protein, C terminal J9260_11415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_11420 PF17962 Bacterial macroglobulin domain 6 J9260_11420 PF01835 MG2 domain J9260_11420 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J9260_11420 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J9260_11420 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J9260_11420 PF00207 Alpha-2-macroglobulin family J9260_11420 PF07703 Alpha-2-macroglobulin bait region domain J9260_11420 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J9260_11440 PF00478 IMP dehydrogenase / GMP reductase domain J9260_11440 PF00571 CBS domain J9260_11445 PF00749 tRNA synthetases class I (E and Q), catalytic domain J9260_11450 PF04608 Phosphatidylglycerophosphatase A J9260_11470 PF13411 MerR HTH family regulatory protein J9260_11475 PF03441 FAD binding domain of DNA photolyase J9260_11475 PF00875 DNA photolyase J9260_11480 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J9260_11485 PF00291 Pyridoxal-phosphate dependent enzyme J9260_11485 PF00585 C-terminal regulatory domain of Threonine dehydratase J9260_11500 PF03781 Sulfatase-modifying factor enzyme 1 J9260_11505 PF01738 Dienelactone hydrolase family J9260_11510 PF04551 GcpE protein J9260_11530 PF00005 ABC transporter J9260_11535 PF02405 Permease MlaE J9260_11550 PF00175 Oxidoreductase NAD-binding domain J9260_11550 PF00111 2Fe-2S iron-sulfur cluster binding domain J9260_11550 PF00970 Oxidoreductase FAD-binding domain J9260_11560 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J9260_11565 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J9260_11570 PF00535 Glycosyl transferase family 2 J9260_11580 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J9260_11600 PF13439 Glycosyltransferase Family 4 J9260_11605 PF13439 Glycosyltransferase Family 4 J9260_11605 PF00534 Glycosyl transferases group 1 J9260_11620 PF00248 Aldo/keto reductase family J9260_11625 PF01266 FAD dependent oxidoreductase J9260_11630 PF01467 Cytidylyltransferase-like J9260_11630 PF00294 pfkB family carbohydrate kinase J9260_11635 PF03279 Bacterial lipid A biosynthesis acyltransferase J9260_11640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J9260_11645 PF08534 Redoxin J9260_11660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J9260_11680 PF00909 Ammonium Transporter Family J9260_11695 PF02754 Cysteine-rich domain J9260_11695 PF13183 4Fe-4S dicluster domain J9260_11705 PF00004 ATPase family associated with various cellular activities (AAA) J9260_11705 PF17871 AAA lid domain J9260_11705 PF02861 Clp amino terminal domain, pathogenicity island component J9260_11705 PF10431 C-terminal, D2-small domain, of ClpB protein J9260_11705 PF07724 AAA domain (Cdc48 subfamily) J9260_11740 PF07690 Major Facilitator Superfamily J9260_11785 PF02616 Segregation and condensation protein ScpA J9260_11790 PF00579 tRNA synthetases class I (W and Y) J9260_11795 PF02163 Peptidase family M50 J9260_11800 PF01300 Telomere recombination J9260_11805 PF04279 Intracellular septation protein A J9260_11810 PF03795 YCII-related domain J9260_11820 PF01571 Aminomethyltransferase folate-binding domain J9260_11825 PF00155 Aminotransferase class I and II J9260_11835 PF13538 UvrD-like helicase C-terminal domain J9260_11840 PF00483 Nucleotidyl transferase J9260_11845 PF01926 50S ribosome-binding GTPase J9260_11845 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J9260_11850 PF01925 Sulfite exporter TauE/SafE J9260_11860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J9260_11865 PF00873 AcrB/AcrD/AcrF family J9260_11870 PF01761 3-dehydroquinate synthase J9260_11875 PF01202 Shikimate kinase J9260_11880 PF03958 Bacterial type II/III secretion system short domain J9260_11880 PF11741 AMIN domain J9260_11880 PF00263 Bacterial type II and III secretion system protein J9260_11880 PF07660 Secretin and TonB N terminus short domain J9260_11885 PF04351 Pilus assembly protein, PilP J9260_11890 PF04350 Pilus assembly protein, PilO J9260_11905 PF00905 Penicillin binding protein transpeptidase domain J9260_11905 PF17092 Penicillin-binding protein OB-like domain J9260_11905 PF00912 Transglycosylase J9260_11915 PF01208 Uroporphyrinogen decarboxylase (URO-D) J9260_11925 PF01165 Ribosomal protein S21 J9260_11930 PF01475 Ferric uptake regulator family J9260_11935 PF04355 SmpA / OmlA family J9260_11945 PF03658 RnfH family Ubiquitin J9260_11950 PF03364 Polyketide cyclase / dehydrase and lipid transport J9260_11960 PF01416 tRNA pseudouridine synthase J9260_11970 PF01118 Semialdehyde dehydrogenase, NAD binding domain J9260_11970 PF02774 Semialdehyde dehydrogenase, dimerisation domain J9260_11975 PF00180 Isocitrate/isopropylmalate dehydrogenase J9260_11980 PF00694 Aconitase C-terminal domain J9260_11985 PF00330 Aconitase family (aconitate hydratase) J9260_11990 PF17210 SdrD B-like domain J9260_11990 PF00746 LPXTG cell wall anchor motif J9260_11990 PF17961 Bacterial Ig domain J9260_11990 PF04650 YSIRK type signal peptide J9260_12015 PF00501 AMP-binding enzyme J9260_12015 PF13193 AMP-binding enzyme C-terminal domain J9260_12015 PF01553 Acyltransferase J9260_12040 PF00400 WD domain, G-beta repeat J9260_12040 PF12894 Anaphase-promoting complex subunit 4 WD40 domain J9260_12050 PF00929 Exonuclease J9260_12055 PF00075 RNase H J9260_12065 PF01464 Transglycosylase SLT domain J9260_12065 PF01476 LysM domain J9260_12070 PF16697 Inner membrane component of T3SS, cytoplasmic domain J9260_12075 PF01812 5-formyltetrahydrofolate cyclo-ligase family J9260_12090 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J9260_12110 PF04055 Radical SAM superfamily J9260_12110 PF01938 TRAM domain J9260_12110 PF00919 Uncharacterized protein family UPF0004 J9260_12115 PF13145 PPIC-type PPIASE domain J9260_12135 PF00216 Bacterial DNA-binding protein J9260_12140 PF02190 ATP-dependent protease La (LON) substrate-binding domain J9260_12140 PF05362 Lon protease (S16) C-terminal proteolytic domain J9260_12140 PF00004 ATPase family associated with various cellular activities (AAA) J9260_12145 PF07724 AAA domain (Cdc48 subfamily) J9260_12145 PF06689 ClpX C4-type zinc finger J9260_12145 PF10431 C-terminal, D2-small domain, of ClpB protein J9260_12150 PF00574 Clp protease J9260_12155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J9260_12155 PF05698 Bacterial trigger factor protein (TF) C-terminus J9260_12155 PF05697 Bacterial trigger factor protein (TF) J9260_12180 PF00072 Response regulator receiver domain J9260_12180 PF00486 Transcriptional regulatory protein, C terminal J9260_12195 PF12729 Four helix bundle sensory module for signal transduction J9260_12195 PF00672 HAMP domain J9260_12195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9260_12200 PF01584 CheW-like domain J9260_12200 PF02895 Signal transducing histidine kinase, homodimeric domain J9260_12200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_12200 PF01627 Hpt domain J9260_12200 PF00072 Response regulator receiver domain J9260_12205 PF00072 Response regulator receiver domain J9260_12205 PF00486 Transcriptional regulatory protein, C terminal J9260_12210 PF01695 IstB-like ATP binding protein J9260_12215 PF00665 Integrase core domain J9260_12245 PF00579 tRNA synthetases class I (W and Y) J9260_12250 PF10145 Phage-related minor tail protein J9260_12250 PF01551 Peptidase family M23 J9260_12250 PF01464 Transglycosylase SLT domain J9260_12255 PF04384 Iron-sulphur cluster assembly J9260_12260 PF00111 2Fe-2S iron-sulfur cluster binding domain J9260_12265 PF00012 Hsp70 protein J9260_12270 PF07743 HSCB C-terminal oligomerisation domain J9260_12275 PF01521 Iron-sulphur cluster biosynthesis J9260_12280 PF01592 NifU-like N terminal domain J9260_12285 PF00266 Aminotransferase class-V J9260_12290 PF02082 Transcriptional regulator J9260_12310 PF00132 Bacterial transferase hexapeptide (six repeats) J9260_12335 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J9260_12335 PF12170 DNA polymerase III tau subunit V interacting with alpha J9260_12335 PF12169 DNA polymerase III subunits gamma and tau domain III J9260_12340 PF02575 YbaB/EbfC DNA-binding family J9260_12345 PF13662 Toprim domain J9260_12345 PF02132 RecR protein J9260_12350 PF01230 HIT domain J9260_12390 PF03480 Bacterial extracellular solute-binding protein, family 7 J9260_12405 PF03737 Aldolase/RraA J9260_12410 PF00463 Isocitrate lyase family J9260_12415 PF06039 Malate:quinone oxidoreductase (Mqo) J9260_12420 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J9260_12425 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J9260_12425 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J9260_12430 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J9260_12430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J9260_12440 PF02796 Helix-turn-helix domain of resolvase J9260_12440 PF00239 Resolvase, N terminal domain J9260_12520 PF13356 Arm DNA-binding domain J9260_12520 PF00589 Phage integrase family J9260_12525 PF01336 OB-fold nucleic acid binding domain J9260_12525 PF00152 tRNA synthetases class II (D, K and N) J9260_12545 PF00872 Transposase, Mutator family J9260_12555 PF12706 Beta-lactamase superfamily domain J9260_12555 PF00753 Metallo-beta-lactamase superfamily J9260_12570 PF00483 Nucleotidyl transferase J9260_12575 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J9260_12580 PF04321 RmlD substrate binding domain J9260_12585 PF16363 GDP-mannose 4,6 dehydratase J9260_12620 PF00535 Glycosyl transferase family 2 J9260_12620 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 J9260_12630 PF02397 Bacterial sugar transferase J9260_12640 PF13614 AAA domain J9260_12690 PF01850 PIN domain J9260_12695 PF00872 Transposase, Mutator family J9260_12700 PF01966 HD domain J9260_12700 PF13286 Phosphohydrolase-associated domain J9260_12705 PF13180 PDZ domain J9260_12715 PF03741 Integral membrane protein TerC family J9260_12720 PF13091 PLD-like domain J9260_12720 PF13396 Phospholipase_D-nuclease N-terminal J9260_12725 PF11700 Vacuole effluxer Atg22 like J9260_12740 PF00311 Phosphoenolpyruvate carboxylase J9260_12760 PF01521 Iron-sulphur cluster biosynthesis J9260_12775 PF02774 Semialdehyde dehydrogenase, dimerisation domain J9260_12775 PF01118 Semialdehyde dehydrogenase, NAD binding domain J9260_12785 PF03653 Uncharacterised protein family (UPF0093) J9260_12790 PF00293 NUDIX domain J9260_12800 PF17946 RecC C-terminal domain J9260_12805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J9260_12805 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J9260_12805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J9260_12810 PF01050 Mannose-6-phosphate isomerase J9260_12810 PF00483 Nucleotidyl transferase J9260_12815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J9260_12815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J9260_12815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J9260_12815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J9260_12825 PF00005 ABC transporter J9260_12825 PF14524 Wzt C-terminal domain J9260_12840 PF00534 Glycosyl transferases group 1 J9260_12840 PF13439 Glycosyltransferase Family 4 J9260_12875 PF00413 Matrixin J9260_12875 PF08548 Peptidase M10 serralysin C terminal J9260_12875 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J9260_12880 PF02321 Outer membrane efflux protein J9260_12885 PF00005 ABC transporter J9260_12885 PF00664 ABC transporter transmembrane region J9260_12890 PF00529 HlyD membrane-fusion protein of T1SS J9260_12895 PF16363 GDP-mannose 4,6 dehydratase J9260_12905 PF13439 Glycosyltransferase Family 4 J9260_12905 PF00534 Glycosyl transferases group 1 J9260_12910 PF13439 Glycosyltransferase Family 4 J9260_12910 PF00534 Glycosyl transferases group 1 J9260_12915 PF01370 NAD dependent epimerase/dehydratase family J9260_12920 PF05685 Putative restriction endonuclease J9260_12925 PF02397 Bacterial sugar transferase J9260_12930 PF02719 Polysaccharide biosynthesis protein J9260_12935 PF00005 ABC transporter J9260_12935 PF12848 ABC transporter J9260_12945 PF04305 Protein of unknown function (DUF455) J9260_12960 PF05161 MOFRL family J9260_12960 PF13660 Domain of unknown function (DUF4147) J9260_12965 PF01053 Cys/Met metabolism PLP-dependent enzyme J9260_12970 PF01476 LysM domain J9260_12970 PF03734 L,D-transpeptidase catalytic domain J9260_12975 PF00156 Phosphoribosyl transferase domain J9260_12980 PF02674 Colicin V production protein J9260_12990 PF02875 Mur ligase family, glutamate ligase domain J9260_12990 PF08245 Mur ligase middle domain J9260_12995 PF01039 Carboxyl transferase domain J9260_12995 PF17848 Acetyl-coA carboxylase zinc finger domain J9260_13000 PF00290 Tryptophan synthase alpha chain J9260_13005 PF00291 Pyridoxal-phosphate dependent enzyme J9260_13030 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J9260_13035 PF00202 Aminotransferase class-III J9260_13040 PF17761 DUF1016 N-terminal domain J9260_13040 PF06250 YhcG PDDEXK nuclease domain J9260_13045 PF01645 Conserved region in glutamate synthase J9260_13055 PF01494 FAD binding domain J9260_13065 PF05195 Aminopeptidase P, N-terminal domain J9260_13065 PF00557 Metallopeptidase family M24 J9260_13080 PF05164 Cell division protein ZapA J9260_13095 PF01903 CbiX J9260_13100 PF08241 Methyltransferase domain J9260_13105 PF00561 alpha/beta hydrolase fold J9260_13110 PF02660 Glycerol-3-phosphate acyltransferase J9260_13115 PF02774 Semialdehyde dehydrogenase, dimerisation domain J9260_13115 PF01118 Semialdehyde dehydrogenase, NAD binding domain J9260_13130 PF00267 Gram-negative porin J9260_13135 PF00849 RNA pseudouridylate synthase J9260_13135 PF01479 S4 domain J9260_13145 PF00437 Type II/IV secretion system protein J9260_13155 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J9260_13160 PF01235 Sodium:alanine symporter family J9260_13165 PF00588 SpoU rRNA Methylase family J9260_13170 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J9260_13170 PF00561 alpha/beta hydrolase fold J9260_13180 PF00380 Ribosomal protein S9/S16 J9260_13185 PF00572 Ribosomal protein L13 J9260_13190 PF00535 Glycosyl transferase family 2 J9260_13195 PF00535 Glycosyl transferase family 2 J9260_13210 PF00535 Glycosyl transferase family 2 J9260_13225 PF14524 Wzt C-terminal domain J9260_13225 PF00005 ABC transporter J9260_13250 PF00263 Bacterial type II and III secretion system protein J9260_13250 PF03958 Bacterial type II/III secretion system short domain J9260_13265 PF05137 Fimbrial assembly protein (PilN) J9260_13275 PF00589 Phage integrase family J9260_13275 PF13356 Arm DNA-binding domain J9260_13305 PF00574 Clp protease J9260_13385 PF13148 Protein of unknown function (DUF3987) J9260_13400 PF00512 His Kinase A (phospho-acceptor) domain J9260_13400 PF01627 Hpt domain J9260_13400 PF00072 Response regulator receiver domain J9260_13400 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J9260_13400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_13400 PF00672 HAMP domain J9260_13410 PF00750 tRNA synthetases class I (R) J9260_13410 PF05746 DALR anticodon binding domain J9260_13410 PF03485 Arginyl tRNA synthetase N terminal domain J9260_13425 PF03880 DbpA RNA binding domain J9260_13425 PF00270 DEAD/DEAH box helicase J9260_13425 PF00271 Helicase conserved C-terminal domain J9260_13430 PF00488 MutS domain V J9260_13430 PF01713 Smr domain J9260_13435 PF01975 Survival protein SurE J9260_13445 PF01551 Peptidase family M23 J9260_13445 PF01476 LysM domain J9260_13450 PF00578 AhpC/TSA family J9260_13475 PF01794 Ferric reductase like transmembrane component J9260_13480 PF00174 Oxidoreductase molybdopterin binding domain J9260_13510 PF01494 FAD binding domain J9260_13515 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J9260_13515 PF02779 Transketolase, pyrimidine binding domain J9260_13515 PF02780 Transketolase, C-terminal domain J9260_13520 PF00348 Polyprenyl synthetase J9260_13525 PF02609 Exonuclease VII small subunit J9260_13535 PF07072 Cell division protein J9260_13540 PF01121 Dephospho-CoA kinase J9260_13545 PF01649 Ribosomal protein S20 J9260_13550 PF02195 ParB-like nuclease domain J9260_13550 PF17762 HTH domain found in ParB protein J9260_13555 PF13614 AAA domain J9260_13560 PF02527 rRNA small subunit methyltransferase G J9260_13565 PF01134 Glucose inhibited division protein A J9260_13565 PF13932 GidA associated domain J9260_13570 PF06968 Biotin and Thiamin Synthesis associated domain J9260_13570 PF04055 Radical SAM superfamily J9260_13580 PF01196 Ribosomal protein L17 J9260_13585 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J9260_13585 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J9260_13585 PF01000 RNA polymerase Rpb3/RpoA insert domain J9260_13590 PF01479 S4 domain J9260_13590 PF00163 Ribosomal protein S4/S9 N-terminal domain J9260_13595 PF00411 Ribosomal protein S11 J9260_13600 PF00416 Ribosomal protein S13/S18 J9260_13605 PF00444 Ribosomal protein L36 J9260_13610 PF00344 SecY translocase J9260_13615 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J9260_13620 PF00327 Ribosomal protein L30p/L7e J9260_13625 PF00333 Ribosomal protein S5, N-terminal domain J9260_13625 PF03719 Ribosomal protein S5, C-terminal domain J9260_13630 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J9260_13635 PF00347 Ribosomal protein L6 J9260_13640 PF00410 Ribosomal protein S8 J9260_13645 PF00253 Ribosomal protein S14p/S29e J9260_13650 PF00281 Ribosomal protein L5 J9260_13650 PF00673 ribosomal L5P family C-terminus J9260_13655 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J9260_13655 PF00467 KOW motif J9260_13660 PF00238 Ribosomal protein L14p/L23e J9260_13665 PF00366 Ribosomal protein S17 J9260_13670 PF00831 Ribosomal L29 protein J9260_13675 PF00252 Ribosomal protein L16p/L10e J9260_13680 PF07650 KH domain J9260_13680 PF00189 Ribosomal protein S3, C-terminal domain J9260_13685 PF00237 Ribosomal protein L22p/L17e J9260_13690 PF00203 Ribosomal protein S19 J9260_13695 PF03947 Ribosomal Proteins L2, C-terminal domain J9260_13695 PF00181 Ribosomal Proteins L2, RNA binding domain J9260_13700 PF00276 Ribosomal protein L23 J9260_13705 PF00573 Ribosomal protein L4/L1 family J9260_13710 PF00297 Ribosomal protein L3 J9260_13715 PF00338 Ribosomal protein S10p/S20e J9260_13725 PF00679 Elongation factor G C-terminus J9260_13725 PF14492 Elongation Factor G, domain II J9260_13725 PF00009 Elongation factor Tu GTP binding domain J9260_13725 PF03144 Elongation factor Tu domain 2 J9260_13725 PF03764 Elongation factor G, domain IV J9260_13730 PF00177 Ribosomal protein S7p/S5e J9260_13735 PF00164 Ribosomal protein S12/S23 J9260_13740 PF04997 RNA polymerase Rpb1, domain 1 J9260_13740 PF00623 RNA polymerase Rpb1, domain 2 J9260_13740 PF04983 RNA polymerase Rpb1, domain 3 J9260_13740 PF05000 RNA polymerase Rpb1, domain 4 J9260_13740 PF04998 RNA polymerase Rpb1, domain 5 J9260_13745 PF04563 RNA polymerase beta subunit J9260_13745 PF04561 RNA polymerase Rpb2, domain 2 J9260_13745 PF04565 RNA polymerase Rpb2, domain 3 J9260_13745 PF10385 RNA polymerase beta subunit external 1 domain J9260_13745 PF00562 RNA polymerase Rpb2, domain 6 J9260_13745 PF04560 RNA polymerase Rpb2, domain 7 J9260_13750 PF16320 Ribosomal protein L7/L12 dimerisation domain J9260_13750 PF00542 Ribosomal protein L7/L12 C-terminal domain J9260_13755 PF00466 Ribosomal protein L10 J9260_13760 PF00687 Ribosomal protein L1p/L10e family J9260_13765 PF03946 Ribosomal protein L11, N-terminal domain J9260_13765 PF00298 Ribosomal protein L11, RNA binding domain J9260_13770 PF02357 Transcription termination factor nusG J9260_13770 PF00467 KOW motif J9260_13775 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J9260_13785 PF03143 Elongation factor Tu C-terminal domain J9260_13785 PF03144 Elongation factor Tu domain 2 J9260_13785 PF00009 Elongation factor Tu GTP binding domain J9260_13805 PF04357 TamB, inner membrane protein subunit of TAM complex J9260_13810 PF01103 Surface antigen J9260_13810 PF07244 Surface antigen variable number repeat J9260_13810 PF17243 POTRA domain TamA domain 1 J9260_13815 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J9260_13820 PF01980 tRNA-methyltransferase O J9260_13820 PF18389 TrmO C-terminal domain J9260_13840 PF02698 DUF218 domain J9260_13845 PF01243 Pyridoxamine 5'-phosphate oxidase J9260_13855 PF00037 4Fe-4S binding domain J9260_13860 PF01467 Cytidylyltransferase-like J9260_13865 PF00950 ABC 3 transport family J9260_13870 PF00005 ABC transporter J9260_13875 PF01297 Zinc-uptake complex component A periplasmic J9260_13895 PF00027 Cyclic nucleotide-binding domain J9260_13895 PF13545 Crp-like helix-turn-helix domain J9260_13900 PF00211 Adenylate and Guanylate cyclase catalytic domain J9260_13920 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) J9260_13920 PF11973 NQRA C-terminal domain J9260_13925 PF03116 NQR2, RnfD, RnfE family J9260_13930 PF04205 FMN-binding domain J9260_13935 PF02508 Rnf-Nqr subunit, membrane protein J9260_13940 PF02508 Rnf-Nqr subunit, membrane protein J9260_13945 PF00175 Oxidoreductase NAD-binding domain J9260_13945 PF00111 2Fe-2S iron-sulfur cluster binding domain J9260_13945 PF00970 Oxidoreductase FAD-binding domain J9260_13955 PF00571 CBS domain J9260_13955 PF01743 Poly A polymerase head domain J9260_13965 PF06827 Zinc finger found in FPG and IleRS J9260_13965 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J9260_13965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J9260_13975 PF01207 Dihydrouridine synthase (Dus) J9260_14035 PF01867 CRISPR associated protein Cas1 J9260_14045 PF01695 IstB-like ATP binding protein J9260_14050 PF00665 Integrase core domain J9260_14140 PF08011 PD-(D/E)XK nuclease superfamily J9260_14140 PF09820 Predicted AAA-ATPase J9260_14150 PF01966 HD domain J9260_14150 PF00072 Response regulator receiver domain J9260_14170 PF07728 AAA domain (dynein-related subfamily) J9260_14170 PF08406 CbbQ/NirQ/NorQ C-terminal J9260_14200 PF08338 Domain of unknown function (DUF1731) J9260_14200 PF01370 NAD dependent epimerase/dehydratase family J9260_14225 PF00005 ABC transporter J9260_14225 PF13732 Domain of unknown function (DUF4162) J9260_14245 PF02673 Bacitracin resistance protein BacA J9260_14255 PF08351 Domain of unknown function (DUF1726) J9260_14255 PF13718 GNAT acetyltransferase 2 J9260_14255 PF05127 Helicase J9260_14255 PF17176 tRNA-binding domain J9260_14260 PF00543 Nitrogen regulatory protein P-II J9260_14265 PF00795 Carbon-nitrogen hydrolase J9260_14265 PF02540 NAD synthase J9260_14275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_14275 PF00512 His Kinase A (phospho-acceptor) domain J9260_14280 PF02954 Bacterial regulatory protein, Fis family J9260_14280 PF00072 Response regulator receiver domain J9260_14280 PF00158 Sigma-54 interaction domain J9260_14285 PF00005 ABC transporter J9260_14285 PF12848 ABC transporter J9260_14290 PF00072 Response regulator receiver domain J9260_14290 PF00486 Transcriptional regulatory protein, C terminal J9260_14305 PF05690 Thiazole biosynthesis protein ThiG J9260_14305 PF02597 ThiS family J9260_14310 PF05690 Thiazole biosynthesis protein ThiG J9260_14315 PF02390 Putative methyltransferase J9260_14325 PF00551 Formyl transferase J9260_14330 PF03600 Citrate transporter J9260_14335 PF00375 Sodium:dicarboxylate symporter family J9260_14340 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J9260_14345 PF04055 Radical SAM superfamily J9260_14360 PF01740 STAS domain J9260_14360 PF00916 Sulfate permease family J9260_14375 PF12693 GspL periplasmic domain J9260_14375 PF05134 Type II secretion system (T2SS), protein L J9260_14380 PF03934 Type II secretion system (T2SS), protein K J9260_14385 PF01464 Transglycosylase SLT domain J9260_14385 PF14718 Soluble lytic murein transglycosylase L domain J9260_14400 PF01274 Malate synthase J9260_14410 PF18381 YcaO cyclodehydratase C-terminal domain J9260_14410 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding J9260_14415 PF00194 Eukaryotic-type carbonic anhydrase J9260_14430 PF01844 HNH endonuclease J9260_14455 PF04607 Region found in RelA / SpoT proteins J9260_14455 PF02824 TGS domain J9260_14455 PF13291 ACT domain J9260_14465 PF00005 ABC transporter J9260_14465 PF12848 ABC transporter J9260_14475 PF02926 THUMP domain J9260_14475 PF02568 Thiamine biosynthesis protein (ThiI) J9260_14480 PF01145 SPFH domain / Band 7 family J9260_14480 PF15975 Flotillin J9260_14495 PF00117 Glutamine amidotransferase class-I J9260_14500 PF00475 Imidazoleglycerol-phosphate dehydratase J9260_14505 PF00438 S-adenosylmethionine synthetase, N-terminal domain J9260_14505 PF02773 S-adenosylmethionine synthetase, C-terminal domain J9260_14505 PF02772 S-adenosylmethionine synthetase, central domain J9260_14510 PF05221 S-adenosyl-L-homocysteine hydrolase J9260_14510 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J9260_14520 PF02219 Methylenetetrahydrofolate reductase J9260_14525 PF04452 RNA methyltransferase J9260_14535 PF13180 PDZ domain J9260_14540 PF00202 Aminotransferase class-III J9260_14545 PF02581 Thiamine monophosphate synthase J9260_14550 PF08543 Phosphomethylpyrimidine kinase J9260_14555 PF00583 Acetyltransferase (GNAT) family J9260_14555 PF13380 CoA binding domain J9260_14555 PF13607 Succinyl-CoA ligase like flavodoxin domain J9260_14560 PF00850 Histone deacetylase domain J9260_14585 PF00270 DEAD/DEAH box helicase J9260_14585 PF00271 Helicase conserved C-terminal domain J9260_14590 PF02445 Quinolinate synthetase A protein J9260_14605 PF00270 DEAD/DEAH box helicase J9260_14605 PF00271 Helicase conserved C-terminal domain J9260_14605 PF17764 3′ DNA-binding domain (3′BD) J9260_14605 PF18074 Primosomal protein N C-terminal domain J9260_14605 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J9260_14610 PF00072 Response regulator receiver domain J9260_14610 PF02954 Bacterial regulatory protein, Fis family J9260_14610 PF00158 Sigma-54 interaction domain J9260_14615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_14615 PF00989 PAS fold J9260_14615 PF00512 His Kinase A (phospho-acceptor) domain J9260_14635 PF00384 Molybdopterin oxidoreductase J9260_14635 PF01568 Molydopterin dinucleotide binding domain J9260_14635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J9260_14640 PF13247 4Fe-4S dicluster domain J9260_14640 PF12800 4Fe-4S binding domain J9260_14655 PF02233 NAD(P) transhydrogenase beta subunit J9260_14660 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J9260_14665 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J9260_14665 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J9260_14670 PF00691 OmpA family J9260_14675 PF03819 MazG nucleotide pyrophosphohydrolase domain J9260_14680 PF01330 RuvA N terminal domain J9260_14680 PF07499 RuvA, C-terminal domain J9260_14695 PF02091 Glycyl-tRNA synthetase alpha subunit J9260_14700 PF05746 DALR anticodon binding domain J9260_14700 PF02092 Glycyl-tRNA synthetase beta subunit J9260_14710 PF01266 FAD dependent oxidoreductase J9260_14760 PF01475 Ferric uptake regulator family J9260_14765 PF00227 Proteasome subunit J9260_14770 PF07724 AAA domain (Cdc48 subfamily) J9260_14770 PF10431 C-terminal, D2-small domain, of ClpB protein J9260_14770 PF00004 ATPase family associated with various cellular activities (AAA) J9260_14795 PF01502 Phosphoribosyl-AMP cyclohydrolase J9260_14800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9260_14800 PF02874 ATP synthase alpha/beta family, beta-barrel domain J9260_14820 PF00119 ATP synthase A chain J9260_14825 PF00137 ATP synthase subunit C J9260_14830 PF00430 ATP synthase B/B' CF(0) J9260_14830 PF11154 Protein of unknown function (DUF2934) J9260_14835 PF02874 ATP synthase alpha/beta family, beta-barrel domain J9260_14835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9260_14835 PF00306 ATP synthase alpha/beta chain, C terminal domain J9260_14840 PF00231 ATP synthase J9260_14850 PF03167 Uracil DNA glycosylase superfamily J9260_14865 PF00175 Oxidoreductase NAD-binding domain J9260_14865 PF00111 2Fe-2S iron-sulfur cluster binding domain J9260_14865 PF00970 Oxidoreductase FAD-binding domain J9260_14880 PF02222 ATP-grasp domain J9260_14880 PF01370 NAD dependent epimerase/dehydratase family J9260_14895 PF01435 Peptidase family M48 J9260_14900 PF00581 Rhodanese-like domain J9260_14905 PF13686 DsrE/DsrF/DrsH-like family J9260_14915 PF10518 TAT (twin-arginine translocation) pathway signal sequence J9260_14915 PF00149 Calcineurin-like phosphoesterase J9260_14920 PF00072 Response regulator receiver domain J9260_14925 PF00072 Response regulator receiver domain J9260_14935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9260_14935 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J9260_14945 PF01584 CheW-like domain J9260_14945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_14945 PF01627 Hpt domain J9260_14945 PF00072 Response regulator receiver domain J9260_14945 PF02895 Signal transducing histidine kinase, homodimeric domain J9260_14960 PF04172 LrgB-like family J9260_14965 PF03788 LrgA family J9260_14970 PF00149 Calcineurin-like phosphoesterase J9260_14975 PF00679 Elongation factor G C-terminus J9260_14975 PF14492 Elongation Factor G, domain II J9260_14975 PF03764 Elongation factor G, domain IV J9260_14975 PF00009 Elongation factor Tu GTP binding domain J9260_14975 PF03144 Elongation factor Tu domain 2 J9260_14980 PF10672 S-adenosylmethionine-dependent methyltransferase J9260_14980 PF17785 PUA-like domain J9260_14990 PF06123 Inner membrane protein CreD J9260_14995 PF01676 Metalloenzyme superfamily J9260_14995 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J9260_15005 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J9260_15010 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J9260_15015 PF03480 Bacterial extracellular solute-binding protein, family 7 J9260_15020 PF06956 Regulator of RNA terminal phosphate cyclase J9260_15020 PF00158 Sigma-54 interaction domain J9260_15035 PF03881 Fructosamine kinase J9260_15040 PF01139 tRNA-splicing ligase RtcB J9260_15065 PF13657 HipA N-terminal domain J9260_15065 PF07804 HipA-like C-terminal domain J9260_15080 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J9260_15085 PF09905 DNA-binding protein VF530 J9260_15090 PF06616 BsuBI/PstI restriction endonuclease domain J9260_15090 PF17728 BsuBI/PstI restriction endonuclease HTH domain J9260_15095 PF07669 Eco57I restriction-modification methylase J9260_15110 PF02600 Disulfide bond formation protein DsbB J9260_15115 PF00171 Aldehyde dehydrogenase family J9260_15135 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J9260_15145 PF00919 Uncharacterized protein family UPF0004 J9260_15145 PF18693 TRAM domain J9260_15145 PF04055 Radical SAM superfamily J9260_15150 PF00107 Zinc-binding dehydrogenase J9260_15150 PF08240 Alcohol dehydrogenase GroES-like domain J9260_15160 PF01168 Alanine racemase, N-terminal domain J9260_15165 PF00437 Type II/IV secretion system protein J9260_15170 PF00437 Type II/IV secretion system protein J9260_15175 PF00437 Type II/IV secretion system protein J9260_15195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J9260_15200 PF00361 Proton-conducting membrane transporter J9260_15200 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J9260_15205 PF00361 Proton-conducting membrane transporter J9260_15210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J9260_15210 PF00361 Proton-conducting membrane transporter J9260_15215 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J9260_15220 PF00361 Proton-conducting membrane transporter J9260_15220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J9260_15225 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) J9260_15230 PF00361 Proton-conducting membrane transporter J9260_15230 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J9260_15245 PF00561 alpha/beta hydrolase fold J9260_15250 PF02580 D-Tyr-tRNA(Tyr) deacylase J9260_15270 PF01722 BolA-like protein J9260_15275 PF03641 Possible lysine decarboxylase J9260_15285 PF01636 Phosphotransferase enzyme family J9260_15290 PF01545 Cation efflux family J9260_15290 PF16916 Dimerisation domain of Zinc Transporter J9260_15295 PF00120 Glutamine synthetase, catalytic domain J9260_15295 PF18318 Glutamine synthetase C-terminal domain J9260_15295 PF12437 Glutamine synthetase type III N terminal J9260_15300 PF00120 Glutamine synthetase, catalytic domain J9260_15300 PF03951 Glutamine synthetase, beta-Grasp domain J9260_15330 PF02954 Bacterial regulatory protein, Fis family J9260_15330 PF00072 Response regulator receiver domain J9260_15330 PF00158 Sigma-54 interaction domain J9260_15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_15335 PF00512 His Kinase A (phospho-acceptor) domain J9260_15335 PF00989 PAS fold J9260_15345 PF00474 Sodium:solute symporter family J9260_15375 PF03330 Lytic transglycolase J9260_15380 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA J9260_15385 PF02492 CobW/HypB/UreG, nucleotide-binding domain J9260_15420 PF00004 ATPase family associated with various cellular activities (AAA) J9260_15420 PF07724 AAA domain (Cdc48 subfamily) J9260_15420 PF10431 C-terminal, D2-small domain, of ClpB protein J9260_15420 PF02861 Clp amino terminal domain, pathogenicity island component J9260_15420 PF17871 AAA lid domain J9260_15440 PF04955 HupE / UreJ protein J9260_15445 PF01455 HupF/HypC family J9260_15450 PF01924 Hydrogenase formation hypA family J9260_15455 PF00586 AIR synthase related protein, N-terminal domain J9260_15455 PF02769 AIR synthase related protein, C-terminal domain J9260_15460 PF02384 N-6 DNA Methylase J9260_15475 PF01420 Type I restriction modification DNA specificity domain J9260_15485 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J9260_15485 PF11867 Domain of unknown function (DUF3387) J9260_15485 PF18766 SWI2/SNF2 ATPase J9260_15490 PF07503 HypF finger J9260_15490 PF01300 Telomere recombination J9260_15490 PF17788 HypF Kae1-like domain J9260_15490 PF00708 Acylphosphatase J9260_15505 PF00374 Nickel-dependent hydrogenase J9260_15525 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal J9260_15525 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J9260_15535 PF01750 Hydrogenase maturation protease J9260_15540 PF02743 Cache domain J9260_15540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_15540 PF00512 His Kinase A (phospho-acceptor) domain J9260_15545 PF02954 Bacterial regulatory protein, Fis family J9260_15545 PF00072 Response regulator receiver domain J9260_15545 PF00158 Sigma-54 interaction domain J9260_15550 PF01740 STAS domain J9260_15550 PF00916 Sulfate permease family J9260_15555 PF02954 Bacterial regulatory protein, Fis family J9260_15555 PF00072 Response regulator receiver domain J9260_15555 PF00158 Sigma-54 interaction domain J9260_15560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_15560 PF00989 PAS fold J9260_15560 PF00512 His Kinase A (phospho-acceptor) domain J9260_15565 PF00484 Carbonic anhydrase J9260_15575 PF00916 Sulfate permease family J9260_15575 PF01740 STAS domain J9260_15600 PF07664 Ferrous iron transport protein B C terminus J9260_15600 PF07670 Nucleoside recognition J9260_15600 PF02421 Ferrous iron transport protein B J9260_15610 PF03831 PhnA domain J9260_15610 PF08274 PhnA Zinc-Ribbon J9260_15620 PF04542 Sigma-70 region 2 J9260_15620 PF04545 Sigma-70, region 4 J9260_15630 PF05973 Phage derived protein Gp49-like (DUF891) J9260_15720 PF13148 Protein of unknown function (DUF3987) J9260_15765 PF11849 Domain of unknown function (DUF3369) J9260_15775 PF00593 TonB dependent receptor J9260_15775 PF07715 TonB-dependent Receptor Plug Domain J9260_15780 PF03900 Porphobilinogen deaminase, C-terminal domain J9260_15780 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J9260_15785 PF02602 Uroporphyrinogen-III synthase HemD J9260_15800 PF00390 Malic enzyme, N-terminal domain J9260_15800 PF03949 Malic enzyme, NAD binding domain J9260_15805 PF13181 Tetratricopeptide repeat J9260_15805 PF01435 Peptidase family M48 J9260_15810 PF01197 Ribosomal protein L31 J9260_15820 PF07977 FabA-like domain J9260_15825 PF01040 UbiA prenyltransferase family J9260_15875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J9260_15875 PF08447 PAS fold J9260_15890 PF00691 OmpA family J9260_15890 PF13488 Glycine zipper J9260_15905 PF01026 TatD related DNase J9260_15910 PF02570 Precorrin-8X methylmutase J9260_15920 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J9260_15920 PF01243 Pyridoxamine 5'-phosphate oxidase J9260_15930 PF08331 Domain of unknown function (DUF1730) J9260_15935 PF12848 ABC transporter J9260_15935 PF16326 ABC transporter C-terminal domain J9260_15935 PF00005 ABC transporter J9260_15940 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J9260_15950 PF00271 Helicase conserved C-terminal domain J9260_15950 PF18339 RapA N-terminal Tudor like domain 1 J9260_15950 PF18337 RapA N-terminal Tudor like domain J9260_15950 PF00176 SNF2 family N-terminal domain J9260_15950 PF12137 RNA polymerase recycling family C-terminal J9260_15965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J9260_15965 PF00384 Molybdopterin oxidoreductase J9260_15965 PF01568 Molydopterin dinucleotide binding domain J9260_15970 PF12800 4Fe-4S binding domain J9260_15970 PF13247 4Fe-4S dicluster domain J9260_15975 PF04976 DMSO reductase anchor subunit (DmsC) J9260_15985 PF00872 Transposase, Mutator family J9260_15990 PF04851 Type III restriction enzyme, res subunit J9260_15990 PF00271 Helicase conserved C-terminal domain J9260_15995 PF07152 YaeQ protein J9260_16000 PF01709 Transcriptional regulator J9260_16005 PF02075 Crossover junction endodeoxyribonuclease RuvC J9260_16020 PF03692 Putative zinc- or iron-chelating domain J9260_16025 PF01479 S4 domain J9260_16040 PF00485 Phosphoribulokinase / Uridine kinase family J9260_16060 PF01850 PIN domain J9260_16095 PF00390 Malic enzyme, N-terminal domain J9260_16095 PF03949 Malic enzyme, NAD binding domain J9260_16095 PF01515 Phosphate acetyl/butaryl transferase J9260_16105 PF00753 Metallo-beta-lactamase superfamily J9260_16115 PF01218 Coproporphyrinogen III oxidase J9260_16125 PF00082 Subtilase family J9260_16125 PF05922 Peptidase inhibitor I9 J9260_16135 PF04542 Sigma-70 region 2 J9260_16135 PF08281 Sigma-70, region 4 J9260_16140 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J9260_16145 PF06574 FAD synthetase J9260_16145 PF01687 Riboflavin kinase J9260_16150 PF00588 SpoU rRNA Methylase family J9260_16155 PF01979 Amidohydrolase family J9260_16160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J9260_16160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J9260_16165 PF00920 Dehydratase family J9260_16170 PF01734 Patatin-like phospholipase J9260_16175 PF00211 Adenylate and Guanylate cyclase catalytic domain J9260_16185 PF00872 Transposase, Mutator family J9260_16205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J9260_16205 PF07992 Pyridine nucleotide-disulphide oxidoreductase J9260_16215 PF13545 Crp-like helix-turn-helix domain J9260_16215 PF00027 Cyclic nucleotide-binding domain J9260_16225 PF01590 GAF domain J9260_16225 PF00360 Phytochrome region J9260_16225 PF00563 EAL domain J9260_16225 PF00990 Diguanylate cyclase, GGDEF domain J9260_16235 PF01809 Putative membrane protein insertion efficiency factor J9260_16265 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J9260_16270 PF01467 Cytidylyltransferase-like J9260_16270 PF00293 NUDIX domain J9260_16275 PF05987 Bacterial protein of unknown function (DUF898) J9260_16290 PF01612 3'-5' exonuclease J9260_16290 PF00570 HRDC domain J9260_16295 PF01136 Peptidase family U32 J9260_16295 PF16325 Peptidase family U32 C-terminal domain J9260_16300 PF17810 Arginine decarboxylase helical bundle domain J9260_16300 PF17944 Arginine decarboxylase C-terminal helical extension J9260_16300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J9260_16310 PF05166 YcgL domain J9260_16325 PF03372 Endonuclease/Exonuclease/phosphatase family J9260_16330 PF01432 Peptidase family M3 J9260_16335 PF18053 DNA gyrase B subunit insert domain J9260_16335 PF00204 DNA gyrase B J9260_16335 PF01751 Toprim domain J9260_16335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_16335 PF00986 DNA gyrase B subunit, carboxyl terminus J9260_16340 PF02463 RecF/RecN/SMC N terminal domain J9260_16345 PF00712 DNA polymerase III beta subunit, N-terminal domain J9260_16345 PF02768 DNA polymerase III beta subunit, C-terminal domain J9260_16345 PF02767 DNA polymerase III beta subunit, central domain J9260_16350 PF08299 Bacterial dnaA protein helix-turn-helix J9260_16350 PF11638 DnaA N-terminal domain J9260_16350 PF00308 Bacterial dnaA protein J9260_16355 PF00468 Ribosomal protein L34 J9260_16360 PF00825 Ribonuclease P J9260_16365 PF02096 60Kd inner membrane protein J9260_16365 PF14849 YidC periplasmic domain J9260_16370 PF01926 50S ribosome-binding GTPase J9260_16370 PF12631 MnmE helical domain J9260_16370 PF10396 GTP-binding protein TrmE N-terminus J9260_16380 PF01751 Toprim domain J9260_16380 PF13368 Topoisomerase C-terminal repeat J9260_16380 PF01131 DNA topoisomerase J9260_16385 PF01300 Telomere recombination J9260_16395 PF11741 AMIN domain J9260_16395 PF01520 N-acetylmuramoyl-L-alanine amidase J9260_16400 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J9260_16410 PF17783 CvfB-like winged helix domain J9260_16410 PF13509 S1 domain J9260_16415 PF00902 Sec-independent protein translocase protein (TatC) J9260_16420 PF02416 mttA/Hcf106 family J9260_16425 PF02416 mttA/Hcf106 family J9260_16430 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J9260_16435 PF00977 Histidine biosynthesis protein J9260_16440 PF00977 Histidine biosynthesis protein J9260_16445 PF02779 Transketolase, pyrimidine binding domain J9260_16445 PF02780 Transketolase, C-terminal domain J9260_16445 PF00456 Transketolase, thiamine diphosphate binding domain J9260_16450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J9260_16450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J9260_16455 PF00162 Phosphoglycerate kinase J9260_16460 PF02887 Pyruvate kinase, alpha/beta domain J9260_16460 PF00224 Pyruvate kinase, barrel domain J9260_16465 PF01116 Fructose-bisphosphate aldolase class-II J9260_16470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J9260_16470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J9260_16475 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J9260_16480 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J9260_16485 PF00374 Nickel-dependent hydrogenase J9260_16495 PF06832 Penicillin-Binding Protein C-terminus Family J9260_16495 PF00912 Transglycosylase J9260_16495 PF00905 Penicillin binding protein transpeptidase domain J9260_16515 PF01139 tRNA-splicing ligase RtcB J9260_16540 PF05724 Thiopurine S-methyltransferase (TPMT) J9260_16545 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J9260_16545 PF00476 DNA polymerase family A J9260_16545 PF01367 5'-3' exonuclease, C-terminal SAM fold J9260_16545 PF01612 3'-5' exonuclease J9260_16575 PF13657 HipA N-terminal domain J9260_16575 PF07804 HipA-like C-terminal domain J9260_16595 PF17284 Spermidine synthase tetramerisation domain J9260_16600 PF04361 Protein of unknown function (DUF494) J9260_16605 PF02481 DNA recombination-mediator protein A J9260_16605 PF17782 DprA winged helix domain J9260_16610 PF00294 pfkB family carbohydrate kinase J9260_16630 PF00717 Peptidase S24-like J9260_16630 PF01726 LexA DNA binding domain J9260_16635 PF00756 Putative esterase J9260_16640 PF00107 Zinc-binding dehydrogenase J9260_16640 PF08240 Alcohol dehydrogenase GroES-like domain J9260_16650 PF00342 Phosphoglucose isomerase J9260_16655 PF02685 Glucokinase J9260_16660 PF00483 Nucleotidyl transferase J9260_16670 PF02446 4-alpha-glucanotransferase J9260_16695 PF08323 Starch synthase catalytic domain J9260_16695 PF00534 Glycosyl transferases group 1 J9260_16700 PF00343 Carbohydrate phosphorylase J9260_16710 PF00753 Metallo-beta-lactamase superfamily J9260_16715 PF14306 PUA-like domain J9260_16715 PF01747 ATP-sulfurylase J9260_16720 PF13187 4Fe-4S dicluster domain J9260_16720 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit J9260_16725 PF00890 FAD binding domain J9260_16730 PF05191 Adenylate kinase, active site lid J9260_16735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J9260_16745 PF00365 Phosphofructokinase J9260_16755 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) J9260_16765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J9260_16770 PF02754 Cysteine-rich domain J9260_16775 PF13085 2Fe-2S iron-sulfur cluster binding domain J9260_16775 PF13183 4Fe-4S dicluster domain J9260_16780 PF01593 Flavin containing amine oxidoreductase J9260_16785 PF01593 Flavin containing amine oxidoreductase J9260_16790 PF03030 Inorganic H+ pyrophosphatase J9260_16800 PF00571 CBS domain J9260_16800 PF03471 Transporter associated domain J9260_16800 PF01595 Cyclin M transmembrane N-terminal domain J9260_16810 PF01557 Fumarylacetoacetate (FAA) hydrolase family J9260_16815 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J9260_16815 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J9260_16830 PF05685 Putative restriction endonuclease J9260_16835 PF02654 Cobalamin-5-phosphate synthase J9260_16840 PF07804 HipA-like C-terminal domain J9260_16840 PF13657 HipA N-terminal domain J9260_16850 PF02277 Phosphoribosyltransferase J9260_16855 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J9260_16860 PF17191 RecG wedge domain J9260_16860 PF13749 Putative ATP-dependent DNA helicase recG C-terminal J9260_16860 PF00270 DEAD/DEAH box helicase J9260_16865 PF01207 Dihydrouridine synthase (Dus) J9260_16870 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J9260_16870 PF12557 Cob(I)alamin adenosyltransferase N terminal J9260_16875 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J9260_16885 PF01142 tRNA pseudouridine synthase D (TruD) J9260_16890 PF00155 Aminotransferase class I and II J9260_16895 PF01206 Sulfurtransferase TusA J9260_16900 PF01678 Diaminopimelate epimerase J9260_16910 PF00589 Phage integrase family J9260_16910 PF02899 Phage integrase, N-terminal SAM-like domain J9260_16945 PF04055 Radical SAM superfamily J9260_16960 PF08281 Sigma-70, region 4 J9260_16960 PF04542 Sigma-70 region 2 J9260_17025 PF01476 LysM domain J9260_17030 PF01327 Polypeptide deformylase J9260_17035 PF02911 Formyl transferase, C-terminal domain J9260_17035 PF00551 Formyl transferase J9260_17040 PF01189 16S rRNA methyltransferase RsmB/F J9260_17040 PF01029 NusB family J9260_17050 PF00989 PAS fold J9260_17050 PF00512 His Kinase A (phospho-acceptor) domain J9260_17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_17050 PF00672 HAMP domain J9260_17055 PF02954 Bacterial regulatory protein, Fis family J9260_17055 PF00072 Response regulator receiver domain J9260_17055 PF00158 Sigma-54 interaction domain J9260_17060 PF02254 TrkA-N domain J9260_17060 PF02080 TrkA-C domain J9260_17065 PF02386 Cation transport protein J9260_17075 PF02401 LytB protein J9260_17080 PF06114 IrrE N-terminal-like domain J9260_17090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J9260_17100 PF02843 Phosphoribosylglycinamide synthetase, C domain J9260_17100 PF02844 Phosphoribosylglycinamide synthetase, N domain J9260_17100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J9260_17115 PF02926 THUMP domain J9260_17115 PF10672 S-adenosylmethionine-dependent methyltransferase J9260_17115 PF01170 Putative RNA methylase family UPF0020 J9260_17120 PF05114 Protein of unknown function (DUF692) J9260_17140 PF00929 Exonuclease J9260_17145 PF00486 Transcriptional regulatory protein, C terminal J9260_17145 PF00072 Response regulator receiver domain J9260_17150 PF00672 HAMP domain J9260_17150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_17150 PF18698 Histidine kinase sensor domain J9260_17150 PF00512 His Kinase A (phospho-acceptor) domain J9260_17150 PF00989 PAS fold J9260_17160 PF01192 RNA polymerase Rpb6 J9260_17165 PF13291 ACT domain J9260_17165 PF04607 Region found in RelA / SpoT proteins J9260_17165 PF02824 TGS domain J9260_17170 PF01042 Endoribonuclease L-PSP J9260_17175 PF02541 Ppx/GppA phosphatase family J9260_17180 PF05661 Protein of unknown function (DUF808) J9260_17185 PF06250 YhcG PDDEXK nuclease domain J9260_17185 PF17761 DUF1016 N-terminal domain J9260_17210 PF13460 NAD(P)H-binding J9260_17210 PF11066 Protein of unknown function (DUF2867) J9260_17225 PF01850 PIN domain J9260_17230 PF07704 Rv0623-like transcription factor J9260_17250 PF10127 RNA repair pathway DNA polymerase beta family J9260_17260 PF02661 Fic/DOC family J9260_17260 PF13784 Fic/DOC family N-terminal J9260_17265 PF11842 Domain of unknown function (DUF3362) J9260_17265 PF04055 Radical SAM superfamily J9260_17265 PF08497 Radical SAM N-terminal J9260_17270 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J9260_17280 PF03562 MltA specific insert domain J9260_17280 PF06725 3D domain J9260_17285 PF06725 3D domain J9260_17285 PF03562 MltA specific insert domain J9260_17295 PF01425 Amidase J9260_17300 PF02934 GatB/GatE catalytic domain J9260_17300 PF02637 GatB domain J9260_17305 PF02686 Glu-tRNAGln amidotransferase C subunit J9260_17325 PF00561 alpha/beta hydrolase fold J9260_17330 PF02525 Flavodoxin-like fold J9260_17335 PF01430 Hsp33 protein J9260_17345 PF04085 rod shape-determining protein MreC J9260_17355 PF02649 Type I GTP cyclohydrolase folE2 J9260_17360 PF16200 C-terminal region of band_7 J9260_17360 PF01145 SPFH domain / Band 7 family J9260_17365 PF01957 NfeD-like C-terminal, partner-binding J9260_17370 PF00149 Calcineurin-like phosphoesterase J9260_17385 PF00005 ABC transporter J9260_17385 PF00664 ABC transporter transmembrane region J9260_17390 PF02683 Cytochrome C biogenesis protein transmembrane region J9260_17390 PF11412 Disulphide bond corrector protein DsbC J9260_17405 PF00317 Ribonucleotide reductase, all-alpha domain J9260_17405 PF02867 Ribonucleotide reductase, barrel domain J9260_17405 PF03477 ATP cone domain J9260_17420 PF00268 Ribonucleotide reductase, small chain J9260_17425 PF02321 Outer membrane efflux protein J9260_17455 PF01694 Rhomboid family J9260_17460 PF00535 Glycosyl transferase family 2 J9260_17470 PF04349 Periplasmic glucan biosynthesis protein, MdoG J9260_17480 PF01209 ubiE/COQ5 methyltransferase family J9260_17495 PF06750 Bacterial Peptidase A24 N-terminal domain J9260_17495 PF01478 Type IV leader peptidase family J9260_17500 PF00482 Type II secretion system (T2SS), protein F J9260_17505 PF00437 Type II/IV secretion system protein J9260_17505 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J9260_17510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J9260_17510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J9260_17510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J9260_17515 PF13439 Glycosyltransferase Family 4 J9260_17520 PF13847 Methyltransferase domain J9260_17530 PF13537 Glutamine amidotransferase domain J9260_17530 PF00733 Asparagine synthase J9260_17535 PF01943 Polysaccharide biosynthesis protein J9260_17535 PF14667 Polysaccharide biosynthesis C-terminal domain J9260_17540 PF08241 Methyltransferase domain J9260_17545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J9260_17550 PF00132 Bacterial transferase hexapeptide (six repeats) J9260_17565 PF13439 Glycosyltransferase Family 4 J9260_17565 PF00534 Glycosyl transferases group 1 J9260_17570 PF00535 Glycosyl transferase family 2 J9260_17580 PF00114 Pilin (bacterial filament) J9260_17580 PF07963 Prokaryotic N-terminal methylation motif J9260_17585 PF01171 PP-loop family J9260_17590 PF13193 AMP-binding enzyme C-terminal domain J9260_17590 PF00501 AMP-binding enzyme J9260_17590 PF16177 Acetyl-coenzyme A synthetase N-terminus J9260_17600 PF13181 Tetratricopeptide repeat J9260_17600 PF00535 Glycosyl transferase family 2 J9260_17625 PF02108 Flagellar assembly protein FliH J9260_17635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J9260_17635 PF02874 ATP synthase alpha/beta family, beta-barrel domain J9260_17635 PF18269 T3SS EscN ATPase C-terminal domain J9260_17640 PF00771 FHIPEP family J9260_17650 PF01312 FlhB HrpN YscU SpaS Family J9260_17655 PF01311 Bacterial export proteins, family 1 J9260_17660 PF01313 Bacterial export proteins, family 3 J9260_17665 PF00813 FliP family J9260_17670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J9260_17680 PF00263 Bacterial type II and III secretion system protein J9260_17680 PF03958 Bacterial type II/III secretion system short domain J9260_17710 PF01514 Secretory protein of YscJ/FliF family J9260_17715 PF03279 Bacterial lipid A biosynthesis acyltransferase J9260_17720 PF18146 Damage-inducible protein CinA KH domain J9260_17720 PF00994 Probable molybdopterin binding domain J9260_17720 PF02464 Competence-damaged protein J9260_17725 PF00762 Ferrochelatase J9260_17735 PF00459 Inositol monophosphatase family J9260_17740 PF01177 Asp/Glu/Hydantoin racemase J9260_17745 PF00849 RNA pseudouridylate synthase J9260_17745 PF01479 S4 domain J9260_17755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J9260_17760 PF00664 ABC transporter transmembrane region J9260_17760 PF00005 ABC transporter J9260_17785 PF00459 Inositol monophosphatase family J9260_17790 PF00753 Metallo-beta-lactamase superfamily J9260_17790 PF16123 Hydroxyacylglutathione hydrolase C-terminus J9260_17795 PF00929 Exonuclease J9260_17800 PF01435 Peptidase family M48 J9260_17810 PF03193 RsgA GTPase J9260_17815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J9260_17815 PF00989 PAS fold J9260_17815 PF00512 His Kinase A (phospho-acceptor) domain J9260_17820 PF04264 YceI-like domain J9260_17825 PF01292 Prokaryotic cytochrome b561 J9260_17830 PF17954 Quercetinase C-terminal cupin domain J9260_17830 PF02678 Pirin J9260_17835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J9260_17835 PF03466 LysR substrate binding domain J9260_17840 PF09335 SNARE associated Golgi protein J9260_17845 PF02562 PhoH-like protein J9260_17845 PF13638 PIN domain J9260_17850 PF00578 AhpC/TSA family J9260_17855 PF00701 Dihydrodipicolinate synthetase family J9260_17860 PF06804 NlpB/DapX lipoprotein J9260_17910 PF02796 Helix-turn-helix domain of resolvase J9260_17910 PF00239 Resolvase, N terminal domain J9260_17950 PF01380 SIS domain J9260_17970 PF13614 AAA domain J9260_17980 PF00239 Resolvase, N terminal domain J9260_17980 PF02796 Helix-turn-helix domain of resolvase J9260_18005 PF01936 NYN domain J9260_18005 PF09722 Protein of unknown function (DUF2384) J9260_18015 PF10609 NUBPL iron-transfer P-loop NTPase J9260_18015 PF01883 Iron-sulfur cluster assembly protein J9260_18055 PF00005 ABC transporter J9260_18065 PF04151 Bacterial pre-peptidase C-terminal domain J9260_18065 PF00082 Subtilase family J9260_18110 PF09722 Protein of unknown function (DUF2384) J9260_18110 PF01936 NYN domain J9260_18120 PF00376 MerR family regulatory protein J9260_18120 PF09278 MerR, DNA binding J9260_18150 PF00873 AcrB/AcrD/AcrF family J9260_18165 PF00239 Resolvase, N terminal domain J9260_18165 PF02796 Helix-turn-helix domain of resolvase J9260_18210 PF00239 Resolvase, N terminal domain J9260_18210 PF02796 Helix-turn-helix domain of resolvase J9260_18265 PF01051 Initiator Replication protein J9260_18290 PF01051 Initiator Replication protein J9260_18340 PF01051 Initiator Replication protein J9260_18375 PF01051 Initiator Replication protein J9260_18405 PF00216 Bacterial DNA-binding protein J9260_18415 PF01051 Initiator Replication protein J9260_18445 PF00216 Bacterial DNA-binding protein J9260_18460 PF01051 Initiator Replication protein J9260_18490 PF13614 AAA domain J9260_18525 PF01051 Initiator Replication protein J9260_18555 PF13614 AAA domain