TMO_0001 SM00382 ATPases associated with a variety of cellular activities TMO_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain TMO_0002 SM00480 DNA polymerase III beta subunit TMO_0003 SM00382 ATPases associated with a variety of cellular activities TMO_0004 SM00387 Histidine kinase-like ATPases TMO_0004 SM00433 TopoisomeraseII TMO_0015 SM01236 TMO_0015 TMO_0018 SM00382 ATPases associated with a variety of cellular activities TMO_0021 SM00382 ATPases associated with a variety of cellular activities TMO_0023 SM00387 Histidine kinase-like ATPases TMO_0023 SM00388 His Kinase A (phosphoacceptor) domain TMO_0024 SM00448 cheY-homologous receiver domain TMO_0026 SM00448 cheY-homologous receiver domain TMO_0032 SM00346 helix_turn_helix isocitrate lyase regulation TMO_0033 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TMO_0037 SM00100 Cyclic nucleotide-monophosphate binding domain TMO_0037 SM00419 helix_turn_helix, cAMP Regulatory protein TMO_0065 SM00530 Helix-turn-helix XRE-family like proteins TMO_0106 SM00382 ATPases associated with a variety of cellular activities TMO_0112 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_0114 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_0114 SM00895 TMO_0114 TMO_0119 SM00829 Enoylreductase TMO_0123 SM00893 Electron transfer flavoprotein domain TMO_0124 SM00893 Electron transfer flavoprotein domain TMO_0131 SM00382 ATPases associated with a variety of cellular activities TMO_0134 SM00563 Phosphate acyltransferases TMO_0141 SM00830 Chorismate mutase type II TMO_0144 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TMO_0144 SM00387 Histidine kinase-like ATPases TMO_0144 SM00388 His Kinase A (phosphoacceptor) domain TMO_0149 SM00849 Metallo-beta-lactamase superfamily TMO_0153 SM00822 TMO_0153 TMO_0158 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_0158 SM00091 PAS domain TMO_0158 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_0158 SM00387 Histidine kinase-like ATPases TMO_0158 SM00388 His Kinase A (phosphoacceptor) domain TMO_0158 SM00448 cheY-homologous receiver domain TMO_0162 SM00382 ATPases associated with a variety of cellular activities TMO_0166 SM00382 ATPases associated with a variety of cellular activities TMO_0166 SM00962 SRP54-type protein, GTPase domain TMO_0166 SM00963 SRP54-type protein, helical bundle domain TMO_0167 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_0169 SM00091 PAS domain TMO_0169 SM00387 Histidine kinase-like ATPases TMO_0169 SM00388 His Kinase A (phosphoacceptor) domain TMO_0170 SM00996 S-adenosyl-L-homocysteine hydrolase TMO_0170 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TMO_0178 SM00382 ATPases associated with a variety of cellular activities TMO_0181 SM00116 Domain in cystathionine beta-synthase and other proteins. TMO_0182 SM00474 3'-5' exonuclease TMO_0186 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TMO_0191 SM00382 ATPases associated with a variety of cellular activities TMO_0199 SM00873 B3/4 domain TMO_0199 SM00874 tRNA synthetase B5 domain TMO_0199 SM00896 Ferredoxin-fold anticodon binding domain TMO_0200 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TMO_0201 SM00838 Elongation factor G C-terminus TMO_0204 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TMO_0205 SM00947 Carbonic anhydrase TMO_0214 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_0214 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_0216 SM01005 Alanine racemase, C-terminal domain TMO_0217 SM00344 helix_turn_helix ASNC type TMO_0219 SM00342 helix_turn_helix, arabinose operon control protein TMO_0219 SM00871 Bacterial transcription activator, effector binding domain TMO_0221 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_0221 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_0221 SM00397 Helical region found in SNAREs TMO_0229 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_0229 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_0233 SM00100 Cyclic nucleotide-monophosphate binding domain TMO_0233 SM00419 helix_turn_helix, cAMP Regulatory protein TMO_0235 SM01007 Class II Aldolase and Adducin N-terminal domain TMO_0238 SM00869 Autotransporter beta-domain TMO_0240 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_0248 SM00382 ATPases associated with a variety of cellular activities TMO_0250 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_0255 SM01060 TMO_0255 TMO_0259 SM00342 helix_turn_helix, arabinose operon control protein TMO_0264 SM00946 Prolyl-tRNA synthetase, C-terminal TMO_0267 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_0268 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_0268 SM00895 TMO_0268 TMO_0269 SM01007 Class II Aldolase and Adducin N-terminal domain TMO_0273 SM00382 ATPases associated with a variety of cellular activities TMO_0281 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_0281 SM00895 TMO_0281 TMO_0289 SM00382 ATPases associated with a variety of cellular activities TMO_0291 SM01230 TMO_0291 TMO_0292 SM00382 ATPases associated with a variety of cellular activities TMO_0293 SM00382 ATPases associated with a variety of cellular activities TMO_0309 SM01400 TMO_0309 TMO_0317 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TMO_0320 SM00091 PAS domain TMO_0320 SM00382 ATPases associated with a variety of cellular activities TMO_0323 SM00382 ATPases associated with a variety of cellular activities TMO_0324 SM01116 TMO_0324 TMO_0329 SM00382 ATPases associated with a variety of cellular activities TMO_0330 SM00382 ATPases associated with a variety of cellular activities TMO_0335 SM00327 von Willebrand factor (vWF) type A domain TMO_0337 SM00271 DnaJ molecular chaperone homology domain TMO_0338 SM00530 Helix-turn-helix XRE-family like proteins TMO_0343 SM01091 Transporter associated domain TMO_0349 SM00346 helix_turn_helix isocitrate lyase regulation TMO_0353 SM00957 SecA DEAD-like domain TMO_0353 SM00958 SecA preprotein cross-linking domain TMO_0370 SM00448 cheY-homologous receiver domain TMO_0370 SM00862 Transcriptional regulatory protein, C terminal TMO_0372 SM00387 Histidine kinase-like ATPases TMO_0372 SM00388 His Kinase A (phosphoacceptor) domain TMO_0376 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TMO_0380 SM00937 TMO_0380 TMO_0384 SM00382 ATPases associated with a variety of cellular activities TMO_0384 SM01086 C-terminal, D2-small domain, of ClpB protein TMO_0386 SM00869 Autotransporter beta-domain TMO_0387 SM00420 helix_turn_helix, Deoxyribose operon repressor TMO_0387 SM01134 TMO_0387 TMO_0389 SM00342 helix_turn_helix, arabinose operon control protein TMO_0403 SM00843 TMO_0403 TMO_0413 SM00226 Low molecular weight phosphatase family TMO_0419 SM00354 helix_turn _helix lactose operon repressor TMO_0428 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_0428 SM00876 Biotin and Thiamin Synthesis associated domain TMO_0429 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_0429 SM00895 TMO_0429 TMO_0433 SM00382 ATPases associated with a variety of cellular activities TMO_0438 SM00342 helix_turn_helix, arabinose operon control protein TMO_0440 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_0445 SM00028 Tetratricopeptide repeats TMO_0451 SM00387 Histidine kinase-like ATPases TMO_0451 SM00388 His Kinase A (phosphoacceptor) domain TMO_0452 SM00448 cheY-homologous receiver domain TMO_0452 SM00862 Transcriptional regulatory protein, C terminal TMO_0461 SM00226 Low molecular weight phosphatase family TMO_0462 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_0462 SM00895 TMO_0462 TMO_0469 SM00448 cheY-homologous receiver domain TMO_0469 SM00862 Transcriptional regulatory protein, C terminal TMO_0470 SM00387 Histidine kinase-like ATPases TMO_0471 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TMO_0473 SM00342 helix_turn_helix, arabinose operon control protein TMO_0476 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_0484 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_0485 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_0487 SM00822 TMO_0487 TMO_0487 SM00823 Phosphopantetheine attachment site TMO_0487 SM00825 Beta-ketoacyl synthase TMO_0487 SM00826 TMO_0487 TMO_0487 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TMO_0487 SM00829 Enoylreductase TMO_0487 SM01294 TMO_0487 TMO_0490 SM00825 Beta-ketoacyl synthase TMO_0495 SM00382 ATPases associated with a variety of cellular activities TMO_0496 SM00382 ATPases associated with a variety of cellular activities TMO_0500 SM01012 TMO_0500 TMO_0506 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_0506 SM00091 PAS domain TMO_0506 SM00387 Histidine kinase-like ATPases TMO_0506 SM00388 His Kinase A (phosphoacceptor) domain TMO_0509 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_0509 SM00091 PAS domain TMO_0509 SM00387 Histidine kinase-like ATPases TMO_0509 SM00388 His Kinase A (phosphoacceptor) domain TMO_0525 SM00833 Cobalamin synthesis protein cobW C-terminal domain TMO_0528 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TMO_0533 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TMO_0536 SM00342 helix_turn_helix, arabinose operon control protein TMO_0541 SM00829 Enoylreductase TMO_0544 SM00342 helix_turn_helix, arabinose operon control protein TMO_0552 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_0552 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_0555 SM00861 Transketolase, pyrimidine binding domain TMO_0562 SM00966 SpoVT / AbrB like domain TMO_0565 SM00318 Staphylococcal nuclease homologues TMO_0568 SM01007 Class II Aldolase and Adducin N-terminal domain TMO_0576 SM00271 DnaJ molecular chaperone homology domain TMO_0578 SM00984 UDP binding domain TMO_0581 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_0588 SM00382 ATPases associated with a variety of cellular activities TMO_0588 SM01086 C-terminal, D2-small domain, of ClpB protein TMO_0595 SM00823 Phosphopantetheine attachment site TMO_0595 SM00824 Thioesterase TMO_0600 SM00822 TMO_0600 TMO_0607 SM00344 helix_turn_helix ASNC type TMO_0618 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_0618 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_0633 SM00382 ATPases associated with a variety of cellular activities TMO_0634 SM00382 ATPases associated with a variety of cellular activities TMO_0641 SM00822 TMO_0641 TMO_0642 SM00822 TMO_0642 TMO_0645 SM00530 Helix-turn-helix XRE-family like proteins TMO_0648 SM00829 Enoylreductase TMO_0649 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_0649 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_0651 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TMO_0663 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_0663 SM00895 TMO_0663 TMO_0669 SM00100 Cyclic nucleotide-monophosphate binding domain TMO_0671 SM00966 SpoVT / AbrB like domain TMO_0675 SM00382 ATPases associated with a variety of cellular activities TMO_0695 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_0696 SM00822 TMO_0696 TMO_0710 SM00984 UDP binding domain TMO_0736 SM00530 Helix-turn-helix XRE-family like proteins TMO_0737 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_0739 SM00829 Enoylreductase TMO_0743 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_0748 SM00487 DEAD-like helicases superfamily TMO_0748 SM00490 helicase superfamily c-terminal domain TMO_0749 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_0749 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_0757 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_0758 SM00267 diguanylate cyclase TMO_0760 SM00917 LeuA allosteric (dimerisation) domain TMO_0767 SM00155 Phospholipase D. Active site motifs. TMO_0769 SM00903 Flavin reductase like domain TMO_0775 SM00530 Helix-turn-helix XRE-family like proteins TMO_0779 SM00318 Staphylococcal nuclease homologues TMO_0780 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TMO_0788 SM00530 Helix-turn-helix XRE-family like proteins TMO_0791 SM00342 helix_turn_helix, arabinose operon control protein TMO_0803 SM00382 ATPases associated with a variety of cellular activities TMO_0804 SM00382 ATPases associated with a variety of cellular activities TMO_0806 SM00382 ATPases associated with a variety of cellular activities TMO_0814 SM00479 TMO_0814 TMO_0815 SM00116 Domain in cystathionine beta-synthase and other proteins. TMO_0818 SM00342 helix_turn_helix, arabinose operon control protein TMO_0820 SM00382 ATPases associated with a variety of cellular activities TMO_0824 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TMO_0826 SM01018 B12 binding domain TMO_0827 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TMO_0827 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TMO_0831 SM00342 helix_turn_helix, arabinose operon control protein TMO_0832 SM00886 Stress responsive A/B Barrel Domain TMO_0837 SM01001 AIR carboxylase TMO_0852 SM00829 Enoylreductase TMO_0853 SM00849 Metallo-beta-lactamase superfamily TMO_0854 SM00849 Metallo-beta-lactamase superfamily TMO_0862 SM00382 ATPases associated with a variety of cellular activities TMO_0867 SM01049 TMO_0867 TMO_0870 SM00382 ATPases associated with a variety of cellular activities TMO_0879 SM00841 Elongation factor P, C-terminal TMO_0879 SM01185 TMO_0879 TMO_0881 SM01133 TMO_0881 TMO_0884 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TMO_0886 SM00861 Transketolase, pyrimidine binding domain TMO_0889 SM00870 TMO_0889 TMO_0891 SM00530 Helix-turn-helix XRE-family like proteins TMO_0900 SM00382 ATPases associated with a variety of cellular activities TMO_0911 SM00382 ATPases associated with a variety of cellular activities TMO_0917 SM00267 diguanylate cyclase TMO_0921 SM00788 Adenylosuccinate synthetase TMO_0924 SM00382 ATPases associated with a variety of cellular activities TMO_0925 SM00382 ATPases associated with a variety of cellular activities TMO_0929 SM00530 Helix-turn-helix XRE-family like proteins TMO_0930 SM00448 cheY-homologous receiver domain TMO_0932 SM00387 Histidine kinase-like ATPases TMO_0932 SM00388 His Kinase A (phosphoacceptor) domain TMO_0935 SM00363 S4 RNA-binding domain TMO_0937 SM00232 JAB/MPN domain TMO_0943 SM00859 Semialdehyde dehydrogenase, NAD binding domain TMO_0944 SM00530 Helix-turn-helix XRE-family like proteins TMO_0946 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TMO_0946 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TMO_0949 SM00388 His Kinase A (phosphoacceptor) domain TMO_0953 SM00382 ATPases associated with a variety of cellular activities TMO_0956 SM00382 ATPases associated with a variety of cellular activities TMO_0961 SM00382 ATPases associated with a variety of cellular activities TMO_0966 SM00861 Transketolase, pyrimidine binding domain TMO_0967 SM00363 S4 RNA-binding domain TMO_0968 SM00100 Cyclic nucleotide-monophosphate binding domain TMO_0968 SM00419 helix_turn_helix, cAMP Regulatory protein TMO_0971 SM00450 Rhodanese Homology Domain TMO_0978 SM00822 TMO_0978 TMO_0986 SM00271 DnaJ molecular chaperone homology domain TMO_0998 SM00387 Histidine kinase-like ATPases TMO_0998 SM00388 His Kinase A (phosphoacceptor) domain TMO_1004 SM00226 Low molecular weight phosphatase family TMO_1005 SM00316 Ribosomal protein S1-like RNA-binding domain TMO_1020 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TMO_1021 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TMO_1021 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TMO_1025 SM00382 ATPases associated with a variety of cellular activities TMO_1045 SM00965 Secretin and TonB N terminus short domain TMO_1047 SM00903 Flavin reductase like domain TMO_1050 SM00855 Phosphoglycerate mutase family TMO_1059 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_1065 SM00382 ATPases associated with a variety of cellular activities TMO_1067 SM00267 diguanylate cyclase TMO_1068 SM00387 Histidine kinase-like ATPases TMO_1068 SM00388 His Kinase A (phosphoacceptor) domain TMO_1071 SM01236 TMO_1071 TMO_1094 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_1094 SM00091 PAS domain TMO_1094 SM00387 Histidine kinase-like ATPases TMO_1094 SM00388 His Kinase A (phosphoacceptor) domain TMO_1096 SM00858 TMO_1096 TMO_1103 SM00448 cheY-homologous receiver domain TMO_1109 SM00967 RNA 2'-O ribose methyltransferase substrate binding TMO_1127 SM00387 Histidine kinase-like ATPases TMO_1127 SM00388 His Kinase A (phosphoacceptor) domain TMO_1127 SM00448 cheY-homologous receiver domain TMO_1129 SM00382 ATPases associated with a variety of cellular activities TMO_1130 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TMO_1136 SM01329 TMO_1136 TMO_1138 SM00257 Lysin motif TMO_1147 SM00382 ATPases associated with a variety of cellular activities TMO_1149 SM00797 Allophanate hydrolase subunit 2 TMO_1150 SM00796 Allophanate hydrolase subunit 1 TMO_1151 SM00878 Biotin carboxylase C-terminal domain TMO_1160 SM00420 helix_turn_helix, Deoxyribose operon repressor TMO_1160 SM01134 TMO_1160 TMO_1172 SM00327 von Willebrand factor (vWF) type A domain TMO_1173 SM00382 ATPases associated with a variety of cellular activities TMO_1174 SM01092 CO dehydrogenase flavoprotein C-terminal domain TMO_1175 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TMO_1180 SM00421 helix_turn_helix, Lux Regulon TMO_1180 SM00448 cheY-homologous receiver domain TMO_1183 SM00382 ATPases associated with a variety of cellular activities TMO_1184 SM00382 ATPases associated with a variety of cellular activities TMO_1188 SM00255 Toll - interleukin 1 - resistance TMO_1191 SM00382 ATPases associated with a variety of cellular activities TMO_1196 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_1196 SM00895 TMO_1196 TMO_1213 SM00342 helix_turn_helix, arabinose operon control protein TMO_1214 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_1216 SM00267 diguanylate cyclase TMO_1216 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_1219 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_1223 SM00073 Histidine Phosphotransfer domain TMO_1223 SM00260 Two component signalling adaptor domain TMO_1223 SM00387 Histidine kinase-like ATPases TMO_1223 SM00448 cheY-homologous receiver domain TMO_1223 SM01231 TMO_1223 TMO_1224 SM00260 Two component signalling adaptor domain TMO_1225 SM00448 cheY-homologous receiver domain TMO_1226 SM00448 cheY-homologous receiver domain TMO_1227 SM00138 Methyltransferase, chemotaxis proteins TMO_1228 SM00448 cheY-homologous receiver domain TMO_1228 SM00862 Transcriptional regulatory protein, C terminal TMO_1229 SM00382 ATPases associated with a variety of cellular activities TMO_1232 SM00382 ATPases associated with a variety of cellular activities TMO_1239 SM00962 SRP54-type protein, GTPase domain TMO_1241 SM00382 ATPases associated with a variety of cellular activities TMO_1251 SM00387 Histidine kinase-like ATPases TMO_1251 SM00388 His Kinase A (phosphoacceptor) domain TMO_1254 SM00091 PAS domain TMO_1254 SM00267 diguanylate cyclase TMO_1259 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TMO_1262 SM00849 Metallo-beta-lactamase superfamily TMO_1270 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_1270 SM00091 PAS domain TMO_1270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_1280 SM00382 ATPases associated with a variety of cellular activities TMO_1285 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_1287 SM00822 TMO_1287 TMO_1290 SM00382 ATPases associated with a variety of cellular activities TMO_1294 SM01133 TMO_1294 TMO_1302 SM00965 Secretin and TonB N terminus short domain TMO_1311 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_1320 SM00382 ATPases associated with a variety of cellular activities TMO_1321 SM00420 helix_turn_helix, Deoxyribose operon repressor TMO_1321 SM01134 TMO_1321 TMO_1323 SM00869 Autotransporter beta-domain TMO_1324 SM00320 WD40 repeats TMO_1325 SM00833 Cobalamin synthesis protein cobW C-terminal domain TMO_1329 SM00344 helix_turn_helix ASNC type TMO_1335 SM00382 ATPases associated with a variety of cellular activities TMO_1353 SM00342 helix_turn_helix, arabinose operon control protein TMO_1361 SM00487 DEAD-like helicases superfamily TMO_1361 SM00490 helicase superfamily c-terminal domain TMO_1361 SM00847 Helicase associated domain (HA2) Add an annotation TMO_1362 SM00450 Rhodanese Homology Domain TMO_1377 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_1380 SM00829 Enoylreductase TMO_1387 SM00382 ATPases associated with a variety of cellular activities TMO_1392 SM00382 ATPases associated with a variety of cellular activities TMO_1400 SM00382 ATPases associated with a variety of cellular activities TMO_1404 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_1404 SM00895 TMO_1404 TMO_1417 SM00387 Histidine kinase-like ATPases TMO_1417 SM00388 His Kinase A (phosphoacceptor) domain TMO_1421 SM00382 ATPases associated with a variety of cellular activities TMO_1426 SM00346 helix_turn_helix isocitrate lyase regulation TMO_1431 SM00382 ATPases associated with a variety of cellular activities TMO_1438 SM00116 Domain in cystathionine beta-synthase and other proteins. TMO_1438 SM01240 TMO_1438 TMO_1450 SM00382 ATPases associated with a variety of cellular activities TMO_1451 SM00382 ATPases associated with a variety of cellular activities TMO_1457 SM00342 helix_turn_helix, arabinose operon control protein TMO_1466 SM00564 beta-propeller repeat TMO_1484 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TMO_1486 SM00344 helix_turn_helix ASNC type TMO_1492 SM00829 Enoylreductase TMO_1496 SM00829 Enoylreductase TMO_1498 SM00530 Helix-turn-helix XRE-family like proteins TMO_1502 SM00382 ATPases associated with a variety of cellular activities TMO_1507 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TMO_1508 SM00836 DALR anticodon binding domain TMO_1508 SM01016 Arginyl tRNA synthetase N terminal dom TMO_1514 SM00382 ATPases associated with a variety of cellular activities TMO_1515 SM00382 ATPases associated with a variety of cellular activities TMO_1520 SM00448 cheY-homologous receiver domain TMO_1520 SM00862 Transcriptional regulatory protein, C terminal TMO_1524 SM00460 Transglutaminase/protease-like homologues TMO_1531 SM00116 Domain in cystathionine beta-synthase and other proteins. TMO_1531 SM01091 Transporter associated domain TMO_1535 SM00382 ATPases associated with a variety of cellular activities TMO_1542 SM00257 Lysin motif TMO_1543 SM00825 Beta-ketoacyl synthase TMO_1546 SM01323 TMO_1546 TMO_1557 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_1557 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_1568 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_1570 SM00434 DNA Topoisomerase IV TMO_1575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_1575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_1580 SM00731 SprT homologues. TMO_1584 SM01130 TMO_1584 TMO_1587 SM00986 Uracil DNA glycosylase superfamily TMO_1587 SM00987 UreE urease accessory protein, C-terminal domain TMO_1590 SM01409 TMO_1590 TMO_1591 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TMO_1591 SM00954 Region found in RelA / SpoT proteins TMO_1596 SM00358 Double-stranded RNA binding motif TMO_1596 SM00535 Ribonuclease III family TMO_1604 SM00434 DNA Topoisomerase IV TMO_1616 SM01004 Delta-aminolevulinic acid dehydratase TMO_1618 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_1625 SM00487 DEAD-like helicases superfamily TMO_1625 SM00490 helicase superfamily c-terminal domain TMO_1627 SM00487 DEAD-like helicases superfamily TMO_1627 SM00490 helicase superfamily c-terminal domain TMO_1627 SM00982 TMO_1627 TMO_1627 SM01058 CarD-like/TRCF domain TMO_1630 SM00448 cheY-homologous receiver domain TMO_1632 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_1632 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_1634 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_1634 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_1638 SM00357 Cold shock protein domain TMO_1639 SM00357 Cold shock protein domain TMO_1640 SM00346 helix_turn_helix isocitrate lyase regulation TMO_1643 SM00382 ATPases associated with a variety of cellular activities TMO_1644 SM00382 ATPases associated with a variety of cellular activities TMO_1649 SM00382 ATPases associated with a variety of cellular activities TMO_1664 SM00382 ATPases associated with a variety of cellular activities TMO_1668 SM00062 Bacterial periplasmic substrate-binding proteins TMO_1668 SM00267 diguanylate cyclase TMO_1670 SM00530 Helix-turn-helix XRE-family like proteins TMO_1676 SM00936 Penicillin-binding protein 5, C-terminal domain TMO_1681 SM00849 Metallo-beta-lactamase superfamily TMO_1697 SM00883 Chaperonin 10 Kd subunit TMO_1702 SM00382 ATPases associated with a variety of cellular activities TMO_1702 SM00448 cheY-homologous receiver domain TMO_1703 SM00091 PAS domain TMO_1703 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_1703 SM00387 Histidine kinase-like ATPases TMO_1703 SM00388 His Kinase A (phosphoacceptor) domain TMO_1704 SM00382 ATPases associated with a variety of cellular activities TMO_1704 SM00448 cheY-homologous receiver domain TMO_1705 SM00091 PAS domain TMO_1705 SM00387 Histidine kinase-like ATPases TMO_1705 SM00388 His Kinase A (phosphoacceptor) domain TMO_1713 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_1716 SM00861 Transketolase, pyrimidine binding domain TMO_1725 SM00382 ATPases associated with a variety of cellular activities TMO_1726 SM00382 ATPases associated with a variety of cellular activities TMO_1731 SM00988 UreE urease accessory protein, N-terminal domain TMO_1746 SM01192 TMO_1746 TMO_1746 SM01193 TMO_1746 TMO_1756 SM00422 helix_turn_helix, mercury resistance TMO_1762 SM00852 Probable molybdopterin binding domain TMO_1773 SM00935 Outer membrane protein (OmpH-like) TMO_1775 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TMO_1783 SM00481 DNA polymerase alpha chain like domain TMO_1788 SM00421 helix_turn_helix, Lux Regulon TMO_1792 SM00881 CoA binding domain TMO_1794 SM00855 Phosphoglycerate mutase family TMO_1797 SM00903 Flavin reductase like domain TMO_1806 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TMO_1807 SM00073 Histidine Phosphotransfer domain TMO_1808 SM00422 helix_turn_helix, mercury resistance TMO_1809 SM00411 bacterial (prokaryotic) histone like domain TMO_1834 SM00341 Helicase and RNase D C-terminal TMO_1834 SM00474 3'-5' exonuclease TMO_1842 SM00562 TMO_1842 TMO_1843 SM00382 ATPases associated with a variety of cellular activities TMO_1844 SM00091 PAS domain TMO_1844 SM00388 His Kinase A (phosphoacceptor) domain TMO_1852 SM00650 Ribosomal RNA adenine dimethylases TMO_1854 SM00072 Guanylate kinase homologues. TMO_1860 SM00382 ATPases associated with a variety of cellular activities TMO_1863 SM00825 Beta-ketoacyl synthase TMO_1864 SM00823 Phosphopantetheine attachment site TMO_1865 SM00822 TMO_1865 TMO_1866 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TMO_1874 SM01005 Alanine racemase, C-terminal domain TMO_1876 SM00382 ATPases associated with a variety of cellular activities TMO_1877 SM00382 ATPases associated with a variety of cellular activities TMO_1880 SM00822 TMO_1880 TMO_1885 SM00564 beta-propeller repeat TMO_1890 SM00829 Enoylreductase TMO_1891 SM00342 helix_turn_helix, arabinose operon control protein TMO_1898 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_1900 SM00564 beta-propeller repeat TMO_1915 SM00387 Histidine kinase-like ATPases TMO_1915 SM00388 His Kinase A (phosphoacceptor) domain TMO_1915 SM00448 cheY-homologous receiver domain TMO_1917 SM00382 ATPases associated with a variety of cellular activities TMO_1924 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TMO_1924 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_1924 SM00091 PAS domain TMO_1924 SM00387 Histidine kinase-like ATPases TMO_1924 SM00388 His Kinase A (phosphoacceptor) domain TMO_1925 SM00838 Elongation factor G C-terminus TMO_1925 SM00889 Elongation factor G, domain IV TMO_1928 SM00481 DNA polymerase alpha chain like domain TMO_1930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_1930 SM00091 PAS domain TMO_1930 SM00387 Histidine kinase-like ATPases TMO_1930 SM00388 His Kinase A (phosphoacceptor) domain TMO_1933 SM00763 PrkA AAA domain TMO_1940 SM00382 ATPases associated with a variety of cellular activities TMO_1950 SM00382 ATPases associated with a variety of cellular activities TMO_1955 SM00342 helix_turn_helix, arabinose operon control protein TMO_1957 SM00829 Enoylreductase TMO_1962 SM00849 Metallo-beta-lactamase superfamily TMO_1972 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TMO_1973 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TMO_1980 SM00411 bacterial (prokaryotic) histone like domain TMO_1981 SM00382 ATPases associated with a variety of cellular activities TMO_1981 SM00464 Found in ATP-dependent protease La (LON) TMO_1982 SM00382 ATPases associated with a variety of cellular activities TMO_1982 SM00994 ClpX C4-type zinc finger TMO_1982 SM01086 C-terminal, D2-small domain, of ClpB protein TMO_1992 SM00938 Nitrogen regulatory protein P-II TMO_1993 SM01230 TMO_1993 TMO_1996 SM00387 Histidine kinase-like ATPases TMO_1996 SM00433 TopoisomeraseII TMO_2001 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_2006 SM00487 DEAD-like helicases superfamily TMO_2006 SM00490 helicase superfamily c-terminal domain TMO_2010 SM00382 ATPases associated with a variety of cellular activities TMO_2011 SM00382 ATPases associated with a variety of cellular activities TMO_2013 SM00382 ATPases associated with a variety of cellular activities TMO_2020 SM00855 Phosphoglycerate mutase family TMO_2024 SM00382 ATPases associated with a variety of cellular activities TMO_2028 SM00100 Cyclic nucleotide-monophosphate binding domain TMO_2028 SM00419 helix_turn_helix, cAMP Regulatory protein TMO_2036 SM00903 Flavin reductase like domain TMO_2038 SM00342 helix_turn_helix, arabinose operon control protein TMO_2039 SM00344 helix_turn_helix ASNC type TMO_2046 SM00382 ATPases associated with a variety of cellular activities TMO_2047 SM00382 ATPases associated with a variety of cellular activities TMO_2052 SM00100 Cyclic nucleotide-monophosphate binding domain TMO_2053 SM00382 ATPases associated with a variety of cellular activities TMO_2054 SM00869 Autotransporter beta-domain TMO_2058 SM00387 Histidine kinase-like ATPases TMO_2059 SM00448 cheY-homologous receiver domain TMO_2059 SM00862 Transcriptional regulatory protein, C terminal TMO_2063 SM00487 DEAD-like helicases superfamily TMO_2063 SM00490 helicase superfamily c-terminal domain TMO_2086 SM00346 helix_turn_helix isocitrate lyase regulation TMO_2092 SM00382 ATPases associated with a variety of cellular activities TMO_2095 SM00072 Guanylate kinase homologues. TMO_2097 SM00382 ATPases associated with a variety of cellular activities TMO_2098 SM00382 ATPases associated with a variety of cellular activities TMO_2103 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_2103 SM00866 TMO_2103 TMO_2109 SM00341 Helicase and RNase D C-terminal TMO_2109 SM00490 helicase superfamily c-terminal domain TMO_2109 SM00956 TMO_2109 TMO_2110 SM00052 Putative diguanylate phosphodiesterase TMO_2121 SM00271 DnaJ molecular chaperone homology domain TMO_2129 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_2129 SM00895 TMO_2129 TMO_2132 SM00382 ATPases associated with a variety of cellular activities TMO_2133 SM00382 ATPases associated with a variety of cellular activities TMO_2137 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_2137 SM01049 TMO_2137 TMO_2147 SM00382 ATPases associated with a variety of cellular activities TMO_2150 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TMO_2154 SM00387 Histidine kinase-like ATPases TMO_2154 SM00388 His Kinase A (phosphoacceptor) domain TMO_2155 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TMO_2158 SM00382 ATPases associated with a variety of cellular activities TMO_2163 SM00822 TMO_2163 TMO_2166 SM00852 Probable molybdopterin binding domain TMO_2180 SM00342 helix_turn_helix, arabinose operon control protein TMO_2192 SM00382 ATPases associated with a variety of cellular activities TMO_2211 SM00481 DNA polymerase alpha chain like domain TMO_2225 SM00470 ParB-like nuclease domain TMO_2228 SM00255 Toll - interleukin 1 - resistance TMO_2241 SM00422 helix_turn_helix, mercury resistance TMO_2252 SM00998 Adenylosuccinate lyase C-terminus TMO_2259 SM01211 TMO_2259 TMO_2267 SM00965 Secretin and TonB N terminus short domain TMO_2273 SM00450 Rhodanese Homology Domain TMO_2287 SM00363 S4 RNA-binding domain TMO_2287 SM01390 TMO_2287 TMO_2288 SM00382 ATPases associated with a variety of cellular activities TMO_2294 SM00917 LeuA allosteric (dimerisation) domain TMO_2297 SM00840 TMO_2297 TMO_2330 SM01091 Transporter associated domain TMO_2342 SM00387 Histidine kinase-like ATPases TMO_2342 SM00388 His Kinase A (phosphoacceptor) domain TMO_2349 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_2349 SM00866 TMO_2349 TMO_2356 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_2356 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_2356 SM01358 TMO_2356 TMO_2357 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_2357 SM00387 Histidine kinase-like ATPases TMO_2357 SM00388 His Kinase A (phosphoacceptor) domain TMO_2358 SM00448 cheY-homologous receiver domain TMO_2358 SM00862 Transcriptional regulatory protein, C terminal TMO_2360 SM00382 ATPases associated with a variety of cellular activities TMO_2412 SM00530 Helix-turn-helix XRE-family like proteins TMO_2427 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TMO_2428 SM01260 TMO_2428 TMO_2442 SM00116 Domain in cystathionine beta-synthase and other proteins. TMO_2445 SM00344 helix_turn_helix ASNC type TMO_2471 SM00382 ATPases associated with a variety of cellular activities TMO_2488 SM00822 TMO_2488 TMO_2490 SM00342 helix_turn_helix, arabinose operon control protein TMO_2494 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_2494 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_2495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_2495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_2504 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TMO_2505 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TMO_2506 SM00450 Rhodanese Homology Domain TMO_2511 SM00382 ATPases associated with a variety of cellular activities TMO_2514 SM00062 Bacterial periplasmic substrate-binding proteins TMO_2518 SM00382 ATPases associated with a variety of cellular activities TMO_2518 SM00448 cheY-homologous receiver domain TMO_2519 SM00671 Sel1-like repeats. TMO_2534 SM00382 ATPases associated with a variety of cellular activities TMO_2544 SM00382 ATPases associated with a variety of cellular activities TMO_2548 SM01207 TMO_2548 TMO_2549 SM00823 Phosphopantetheine attachment site TMO_2552 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TMO_2552 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TMO_2552 SM00493 TMO_2552 TMO_2553 SM00316 Ribosomal protein S1-like RNA-binding domain TMO_2553 SM00955 TMO_2553 TMO_2559 SM00267 diguanylate cyclase TMO_2559 SM00448 cheY-homologous receiver domain TMO_2560 SM00448 cheY-homologous receiver domain TMO_2570 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TMO_2571 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_2573 SM00878 Biotin carboxylase C-terminal domain TMO_2583 SM00342 helix_turn_helix, arabinose operon control protein TMO_2588 SM00965 Secretin and TonB N terminus short domain TMO_2591 SM00116 Domain in cystathionine beta-synthase and other proteins. TMO_2591 SM00924 MgtE intracellular N domain TMO_2592 SM00919 Malic enzyme, NAD binding domain TMO_2592 SM01274 TMO_2592 TMO_2598 SM00878 Biotin carboxylase C-terminal domain TMO_2603 SM00363 S4 RNA-binding domain TMO_2605 SM00382 ATPases associated with a variety of cellular activities TMO_2606 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TMO_2608 SM00662 RNA polymerases D TMO_2621 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TMO_2622 SM01374 TMO_2622 TMO_2626 SM00322 K homology RNA-binding domain TMO_2629 SM01382 TMO_2629 TMO_2629 SM01383 TMO_2629 TMO_2633 SM01403 TMO_2633 TMO_2635 SM00838 Elongation factor G C-terminus TMO_2635 SM00889 Elongation factor G, domain IV TMO_2638 SM00663 RNA polymerase I subunit A N-terminus TMO_2644 SM00649 Ribosomal protein L11/L12 TMO_2645 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TMO_2645 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TMO_2648 SM00967 RNA 2'-O ribose methyltransferase substrate binding TMO_2649 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_2649 SM00387 Histidine kinase-like ATPases TMO_2650 SM00448 cheY-homologous receiver domain TMO_2650 SM00862 Transcriptional regulatory protein, C terminal TMO_2651 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TMO_2653 SM00382 ATPases associated with a variety of cellular activities TMO_2673 SM00986 Uracil DNA glycosylase superfamily TMO_2673 SM00987 UreE urease accessory protein, C-terminal domain TMO_2678 SM00852 Probable molybdopterin binding domain TMO_2679 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_2681 SM01259 TMO_2681 TMO_2683 SM00387 Histidine kinase-like ATPases TMO_2683 SM00388 His Kinase A (phosphoacceptor) domain TMO_2684 SM00448 cheY-homologous receiver domain TMO_2684 SM00862 Transcriptional regulatory protein, C terminal TMO_2686 SM00382 ATPases associated with a variety of cellular activities TMO_2688 SM00342 helix_turn_helix, arabinose operon control protein TMO_2693 SM00493 TMO_2693 TMO_2696 SM00710 Parallel beta-helix repeats TMO_2701 SM00965 Secretin and TonB N terminus short domain TMO_2708 SM00052 Putative diguanylate phosphodiesterase TMO_2709 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_2713 SM01234 TMO_2713 TMO_2717 SM00831 Cation transporter/ATPase, N-terminus TMO_2720 SM00387 Histidine kinase-like ATPases TMO_2722 SM00880 TMO_2722 TMO_2722 SM01118 TMO_2722 TMO_2723 SM00382 ATPases associated with a variety of cellular activities TMO_2728 SM00382 ATPases associated with a variety of cellular activities TMO_2735 SM00382 ATPases associated with a variety of cellular activities TMO_2738 SM00421 helix_turn_helix, Lux Regulon TMO_2738 SM00448 cheY-homologous receiver domain TMO_2739 SM00387 Histidine kinase-like ATPases TMO_2744 SM00491 TMO_2744 TMO_2749 SM00478 endonuclease III TMO_2760 SM00833 Cobalamin synthesis protein cobW C-terminal domain TMO_2765 SM00530 Helix-turn-helix XRE-family like proteins TMO_2783 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_2783 SM00331 Sigma factor PP2C-like phosphatases TMO_2783 SM01049 TMO_2783 TMO_2792 SM00704 CDGSH-type zinc finger. Function unknown. TMO_2831 SM00382 ATPases associated with a variety of cellular activities TMO_2840 SM00822 TMO_2840 TMO_2844 SM00382 ATPases associated with a variety of cellular activities TMO_2846 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_2850 SM00382 ATPases associated with a variety of cellular activities TMO_2854 SM00346 helix_turn_helix isocitrate lyase regulation TMO_2857 SM00530 Helix-turn-helix XRE-family like proteins TMO_2862 SM00382 ATPases associated with a variety of cellular activities TMO_2865 SM00062 Bacterial periplasmic substrate-binding proteins TMO_2869 SM00342 helix_turn_helix, arabinose operon control protein TMO_2874 SM01209 TMO_2874 TMO_2874 SM01210 TMO_2874 TMO_2879 SM00363 S4 RNA-binding domain TMO_2885 SM00853 MutL C terminal dimerisation domain TMO_2885 SM01340 TMO_2885 TMO_2892 SM00904 Riboflavin kinase TMO_2897 SM00829 Enoylreductase TMO_2906 SM00382 ATPases associated with a variety of cellular activities TMO_2911 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_2911 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_2912 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_2912 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_2920 SM00382 ATPases associated with a variety of cellular activities TMO_2926 SM00421 helix_turn_helix, Lux Regulon TMO_2926 SM00448 cheY-homologous receiver domain TMO_2927 SM00387 Histidine kinase-like ATPases TMO_2931 SM00829 Enoylreductase TMO_2933 SM00382 ATPases associated with a variety of cellular activities TMO_2934 SM00382 ATPases associated with a variety of cellular activities TMO_2944 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_2951 SM00382 ATPases associated with a variety of cellular activities TMO_2954 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_2954 SM00866 TMO_2954 TMO_2956 SM00344 helix_turn_helix ASNC type TMO_2957 SM00460 Transglutaminase/protease-like homologues TMO_2959 SM00342 helix_turn_helix, arabinose operon control protein TMO_2964 SM00342 helix_turn_helix, arabinose operon control protein TMO_2968 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TMO_2973 SM00903 Flavin reductase like domain TMO_2976 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TMO_2976 SM00245 tail specific protease TMO_2981 SM00382 ATPases associated with a variety of cellular activities TMO_2985 SM00382 ATPases associated with a variety of cellular activities TMO_2989 SM00487 DEAD-like helicases superfamily TMO_2989 SM00490 helicase superfamily c-terminal domain TMO_2995 SM00100 Cyclic nucleotide-monophosphate binding domain TMO_2995 SM00419 helix_turn_helix, cAMP Regulatory protein TMO_2997 SM00382 ATPases associated with a variety of cellular activities TMO_3006 SM00861 Transketolase, pyrimidine binding domain TMO_3007 SM00881 CoA binding domain TMO_3012 SM00859 Semialdehyde dehydrogenase, NAD binding domain TMO_3015 SM00382 ATPases associated with a variety of cellular activities TMO_3016 SM00382 ATPases associated with a variety of cellular activities TMO_3034 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TMO_3054 SM01058 CarD-like/TRCF domain TMO_3056 SM00363 S4 RNA-binding domain TMO_3057 SM00490 helicase superfamily c-terminal domain TMO_3058 SM00387 Histidine kinase-like ATPases TMO_3062 SM00382 ATPases associated with a variety of cellular activities TMO_3067 SM00382 ATPases associated with a variety of cellular activities TMO_3075 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_3075 SM00895 TMO_3075 TMO_3077 SM00382 ATPases associated with a variety of cellular activities TMO_3085 SM00028 Tetratricopeptide repeats TMO_3086 SM00382 ATPases associated with a variety of cellular activities TMO_3087 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_3088 SM00062 Bacterial periplasmic substrate-binding proteins TMO_3094 SM00382 ATPases associated with a variety of cellular activities TMO_3095 SM00382 ATPases associated with a variety of cellular activities TMO_3099 SM01152 TMO_3099 TMO_3107 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TMO_3109 SM00849 Metallo-beta-lactamase superfamily TMO_3110 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_3120 SM00798 AICARFT/IMPCHase bienzyme TMO_3120 SM00851 MGS-like domain TMO_3122 SM00953 TMO_3122 TMO_3127 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_3134 SM00464 Found in ATP-dependent protease La (LON) TMO_3138 SM00938 Nitrogen regulatory protein P-II TMO_3141 SM00843 TMO_3141 TMO_3152 SM00855 Phosphoglycerate mutase family TMO_3155 SM00267 diguanylate cyclase TMO_3159 SM00882 Coenzyme A transferase TMO_3160 SM00882 Coenzyme A transferase TMO_3170 SM01236 TMO_3170 TMO_3174 SM00387 Histidine kinase-like ATPases TMO_3174 SM00388 His Kinase A (phosphoacceptor) domain TMO_3175 SM00507 HNH nucleases TMO_3185 SM00382 ATPases associated with a variety of cellular activities TMO_3194 SM00530 Helix-turn-helix XRE-family like proteins TMO_3197 SM00382 ATPases associated with a variety of cellular activities TMO_3209 SM00382 ATPases associated with a variety of cellular activities TMO_3211 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TMO_3211 SM00474 3'-5' exonuclease TMO_3211 SM00475 5'-3' exonuclease TMO_3211 SM00482 DNA polymerase A domain TMO_3212 SM00478 endonuclease III TMO_3221 SM00316 Ribosomal protein S1-like RNA-binding domain TMO_3230 SM00411 bacterial (prokaryotic) histone like domain TMO_3232 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TMO_3239 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TMO_3247 SM00382 ATPases associated with a variety of cellular activities TMO_3247 SM00962 SRP54-type protein, GTPase domain TMO_3247 SM00963 SRP54-type protein, helical bundle domain TMO_3254 SM01329 TMO_3254 TMO_3255 SM00859 Semialdehyde dehydrogenase, NAD binding domain TMO_3256 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TMO_3263 SM00881 CoA binding domain TMO_3269 SM00344 helix_turn_helix ASNC type TMO_3277 SM00382 ATPases associated with a variety of cellular activities TMO_3278 SM00382 ATPases associated with a variety of cellular activities TMO_3281 SM00342 helix_turn_helix, arabinose operon control protein TMO_3297 SM00822 TMO_3297 TMO_3301 SM00947 Carbonic anhydrase TMO_3306 SM00382 ATPases associated with a variety of cellular activities TMO_3318 SM00855 Phosphoglycerate mutase family TMO_3323 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_3325 SM00881 CoA binding domain TMO_3335 SM00382 ATPases associated with a variety of cellular activities TMO_3341 SM01329 TMO_3341 TMO_3345 SM00342 helix_turn_helix, arabinose operon control protein TMO_3348 SM00382 ATPases associated with a variety of cellular activities TMO_3348 SM01086 C-terminal, D2-small domain, of ClpB protein TMO_3356 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_3377 SM00342 helix_turn_helix, arabinose operon control protein TMO_3380 SM00530 Helix-turn-helix XRE-family like proteins TMO_3385 SM00925 MltA specific insert domain TMO_3394 SM00978 TMO_3394 TMO_3400 SM00479 TMO_3400 TMO_3408 SM00357 Cold shock protein domain TMO_3408 SM00382 ATPases associated with a variety of cellular activities TMO_3408 SM00959 Rho termination factor, N-terminal domain TMO_3409 SM00829 Enoylreductase TMO_3416 SM01228 TMO_3416 TMO_3419 SM00470 ParB-like nuclease domain TMO_3433 SM00867 YceI-like domain TMO_3440 SM00448 cheY-homologous receiver domain TMO_3440 SM00862 Transcriptional regulatory protein, C terminal TMO_3445 SM00530 Helix-turn-helix XRE-family like proteins TMO_3446 SM00382 ATPases associated with a variety of cellular activities TMO_3448 SM00478 endonuclease III TMO_3448 SM00525 TMO_3448 TMO_3452 SM00838 Elongation factor G C-terminus TMO_3458 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_3458 SM00866 TMO_3458 TMO_3459 SM00829 Enoylreductase TMO_3461 SM00530 Helix-turn-helix XRE-family like proteins TMO_3465 SM00749 bacterial OsmY and nodulation domain TMO_3469 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_3475 SM00271 DnaJ molecular chaperone homology domain TMO_3481 SM00382 ATPases associated with a variety of cellular activities TMO_3486 SM00382 ATPases associated with a variety of cellular activities TMO_3490 SM00354 helix_turn _helix lactose operon repressor TMO_3492 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TMO_3495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_3501 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TMO_3501 SM00534 ATPase domain of DNA mismatch repair MUTS family TMO_3502 SM00919 Malic enzyme, NAD binding domain TMO_3502 SM01274 TMO_3502 TMO_3503 SM00387 Histidine kinase-like ATPases TMO_3503 SM00388 His Kinase A (phosphoacceptor) domain TMO_3508 SM00382 ATPases associated with a variety of cellular activities TMO_3510 SM00448 cheY-homologous receiver domain TMO_3510 SM00862 Transcriptional regulatory protein, C terminal TMO_3516 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TMO_3517 SM00422 helix_turn_helix, mercury resistance TMO_3521 SM00932 Scaffold protein Nfu/NifU N terminal TMO_3522 SM00046 Diacylglycerol kinase catalytic domain (presumed) TMO_3530 SM00563 Phosphate acyltransferases TMO_3531 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_3534 SM00116 Domain in cystathionine beta-synthase and other proteins. TMO_3534 SM01091 Transporter associated domain TMO_3536 SM00530 Helix-turn-helix XRE-family like proteins TMO_3540 SM00316 Ribosomal protein S1-like RNA-binding domain TMO_3540 SM00322 K homology RNA-binding domain TMO_3545 SM01387 TMO_3545 TMO_3546 SM00316 Ribosomal protein S1-like RNA-binding domain TMO_3546 SM00322 K homology RNA-binding domain TMO_3561 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TMO_3561 SM01232 TMO_3561 TMO_3565 SM00450 Rhodanese Homology Domain TMO_a0001 SM00823 Phosphopantetheine attachment site TMO_a0001 SM00824 Thioesterase TMO_a0014 SM00344 helix_turn_helix ASNC type TMO_a0016 SM00833 Cobalamin synthesis protein cobW C-terminal domain TMO_a0017 SM00346 helix_turn_helix isocitrate lyase regulation TMO_a0023 SM00382 ATPases associated with a variety of cellular activities TMO_a0028 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_a0028 SM00387 Histidine kinase-like ATPases TMO_a0028 SM00388 His Kinase A (phosphoacceptor) domain TMO_a0029 SM00448 cheY-homologous receiver domain TMO_a0029 SM00862 Transcriptional regulatory protein, C terminal TMO_a0030 SM00014 Acid phosphatase homologues TMO_a0049 SM00344 helix_turn_helix ASNC type TMO_a0053 SM00052 Putative diguanylate phosphodiesterase TMO_a0053 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TMO_a0053 SM00091 PAS domain TMO_a0053 SM00267 diguanylate cyclase TMO_a0058 SM00342 helix_turn_helix, arabinose operon control protein TMO_a0072 SM00382 ATPases associated with a variety of cellular activities TMO_a0074 SM00219 Tyrosine kinase, catalytic domain TMO_a0075 SM00331 Sigma factor PP2C-like phosphatases TMO_a0075 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain TMO_a0081 SM00240 Forkhead associated domain TMO_a0082 SM00382 ATPases associated with a variety of cellular activities TMO_a0082 SM01086 C-terminal, D2-small domain, of ClpB protein TMO_a0106 SM00953 TMO_a0106 TMO_a0107 SM00642 Alpha-amylase domain TMO_a0112 SM00342 helix_turn_helix, arabinose operon control protein TMO_a0118 SM00382 ATPases associated with a variety of cellular activities TMO_a0122 SM00382 ATPases associated with a variety of cellular activities TMO_a0124 SM00342 helix_turn_helix, arabinose operon control protein TMO_a0127 SM00382 ATPases associated with a variety of cellular activities TMO_a0128 SM00382 ATPases associated with a variety of cellular activities TMO_a0135 SM00822 TMO_a0135 TMO_a0147 SM01007 Class II Aldolase and Adducin N-terminal domain TMO_a0152 SM00387 Histidine kinase-like ATPases TMO_a0152 SM00388 His Kinase A (phosphoacceptor) domain TMO_a0153 SM00382 ATPases associated with a variety of cellular activities TMO_a0153 SM00448 cheY-homologous receiver domain TMO_a0158 SM00878 Biotin carboxylase C-terminal domain TMO_a0161 SM00822 TMO_a0161 TMO_a0163 SM00382 ATPases associated with a variety of cellular activities TMO_a0168 SM00382 ATPases associated with a variety of cellular activities TMO_a0190 SM00382 ATPases associated with a variety of cellular activities TMO_a0191 SM00382 ATPases associated with a variety of cellular activities TMO_a0193 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_a0193 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_a0194 SM00342 helix_turn_helix, arabinose operon control protein TMO_a0199 SM00342 helix_turn_helix, arabinose operon control protein TMO_a0206 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_a0206 SM00091 PAS domain TMO_a0206 SM00387 Histidine kinase-like ATPases TMO_a0206 SM00388 His Kinase A (phosphoacceptor) domain TMO_a0206 SM00448 cheY-homologous receiver domain TMO_a0206 SM01079 TMO_a0206 TMO_a0212 SM00642 Alpha-amylase domain TMO_a0213 SM00642 Alpha-amylase domain TMO_a0214 SM00642 Alpha-amylase domain TMO_a0215 SM00642 Alpha-amylase domain TMO_a0225 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_a0226 SM00342 helix_turn_helix, arabinose operon control protein TMO_a0230 SM00382 ATPases associated with a variety of cellular activities TMO_a0231 SM00382 ATPases associated with a variety of cellular activities TMO_a0236 SM00822 TMO_a0236 TMO_a0243 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_a0243 SM00091 PAS domain TMO_a0243 SM00387 Histidine kinase-like ATPases TMO_a0243 SM00388 His Kinase A (phosphoacceptor) domain TMO_a0243 SM00448 cheY-homologous receiver domain TMO_a0243 SM01079 TMO_a0243 TMO_a0244 SM00829 Enoylreductase TMO_a0247 SM00382 ATPases associated with a variety of cellular activities TMO_a0257 SM00382 ATPases associated with a variety of cellular activities TMO_a0262 SM00829 Enoylreductase TMO_a0264 SM00966 SpoVT / AbrB like domain TMO_a0272 SM00822 TMO_a0272 TMO_a0283 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_a0283 SM00895 TMO_a0283 TMO_a0297 SM00382 ATPases associated with a variety of cellular activities TMO_a0298 SM00382 ATPases associated with a variety of cellular activities TMO_a0304 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TMO_a0305 SM01092 CO dehydrogenase flavoprotein C-terminal domain TMO_a0309 SM00357 Cold shock protein domain TMO_a0310 SM00357 Cold shock protein domain TMO_a0312 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen TMO_a0315 SM00822 TMO_a0315 TMO_a0324 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_a0334 SM00564 beta-propeller repeat TMO_a0341 SM00382 ATPases associated with a variety of cellular activities TMO_a0346 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_a0346 SM00895 TMO_a0346 TMO_a0357 SM00487 DEAD-like helicases superfamily TMO_a0398 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_a0398 SM00866 TMO_a0398 TMO_a0402 SM00382 ATPases associated with a variety of cellular activities TMO_a0403 SM00382 ATPases associated with a variety of cellular activities TMO_a0415 SM00382 ATPases associated with a variety of cellular activities TMO_a0416 SM00382 ATPases associated with a variety of cellular activities TMO_a0420 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_a0420 SM00895 TMO_a0420 TMO_a0445 SM00346 helix_turn_helix isocitrate lyase regulation TMO_a0453 SM00878 Biotin carboxylase C-terminal domain TMO_a0463 SM00342 helix_turn_helix, arabinose operon control protein TMO_a0466 SM00387 Histidine kinase-like ATPases TMO_a0466 SM00388 His Kinase A (phosphoacceptor) domain TMO_a0470 SM00387 Histidine kinase-like ATPases TMO_a0470 SM00388 His Kinase A (phosphoacceptor) domain TMO_a0470 SM00448 cheY-homologous receiver domain TMO_a0471 SM00421 helix_turn_helix, Lux Regulon TMO_a0471 SM00448 cheY-homologous receiver domain TMO_a0480 SM00306 Hint (Hedgehog/Intein) domain N-terminal region TMO_a0482 SM00226 Low molecular weight phosphatase family TMO_a0482 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TMO_a0483 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TMO_a0497 SM00382 ATPases associated with a variety of cellular activities TMO_a0498 SM00382 ATPases associated with a variety of cellular activities TMO_a0502 SM00822 TMO_a0502 TMO_a0504 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_a0522 SM00342 helix_turn_helix, arabinose operon control protein TMO_a0534 SM00387 Histidine kinase-like ATPases TMO_a0535 SM00421 helix_turn_helix, Lux Regulon TMO_a0535 SM00448 cheY-homologous receiver domain TMO_a0556 SM00346 helix_turn_helix isocitrate lyase regulation TMO_a0566 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_a0569 SM00829 Enoylreductase TMO_a0576 SM00965 Secretin and TonB N terminus short domain TMO_a0599 SM00530 Helix-turn-helix XRE-family like proteins TMO_a0600 SM01060 TMO_a0600 TMO_a0601 SM00116 Domain in cystathionine beta-synthase and other proteins. TMO_a0602 SM00986 Uracil DNA glycosylase superfamily TMO_a0602 SM00987 UreE urease accessory protein, C-terminal domain TMO_a0603 SM00822 TMO_a0603 TMO_a0603 SM00823 Phosphopantetheine attachment site TMO_a0603 SM00825 Beta-ketoacyl synthase TMO_b0021 SM01007 Class II Aldolase and Adducin N-terminal domain TMO_b0024 SM00382 ATPases associated with a variety of cellular activities TMO_b0027 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_b0027 SM00895 TMO_b0027 TMO_b0028 SM00062 Bacterial periplasmic substrate-binding proteins TMO_b0028 SM00091 PAS domain TMO_b0028 SM00387 Histidine kinase-like ATPases TMO_b0028 SM00388 His Kinase A (phosphoacceptor) domain TMO_b0028 SM00448 cheY-homologous receiver domain TMO_b0029 SM00448 cheY-homologous receiver domain TMO_b0029 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TMO_b0033 SM00530 Helix-turn-helix XRE-family like proteins TMO_b0036 SM00382 ATPases associated with a variety of cellular activities TMO_b0040 SM00382 ATPases associated with a variety of cellular activities TMO_b0044 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_b0044 SM00895 TMO_b0044 TMO_b0051 SM00342 helix_turn_helix, arabinose operon control protein TMO_b0056 SM00062 Bacterial periplasmic substrate-binding proteins TMO_b0058 SM00382 ATPases associated with a variety of cellular activities TMO_b0059 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TMO_b0078 SM00342 helix_turn_helix, arabinose operon control protein TMO_b0082 SM00849 Metallo-beta-lactamase superfamily TMO_b0086 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_b0086 SM00895 TMO_b0086 TMO_b0087 SM01130 TMO_b0087 TMO_b0089 SM00062 Bacterial periplasmic substrate-binding proteins TMO_b0092 SM00382 ATPases associated with a variety of cellular activities TMO_b0102 SM00382 ATPases associated with a variety of cellular activities TMO_b0103 SM00382 ATPases associated with a variety of cellular activities TMO_b0122 SM00859 Semialdehyde dehydrogenase, NAD binding domain TMO_b0127 SM00267 diguanylate cyclase TMO_b0129 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_b0129 SM00091 PAS domain TMO_b0129 SM00387 Histidine kinase-like ATPases TMO_b0129 SM00388 His Kinase A (phosphoacceptor) domain TMO_b0129 SM00448 cheY-homologous receiver domain TMO_b0129 SM01079 TMO_b0129 TMO_b0140 SM00382 ATPases associated with a variety of cellular activities TMO_b0141 SM01130 TMO_b0141 TMO_b0151 SM00062 Bacterial periplasmic substrate-binding proteins TMO_b0153 SM00382 ATPases associated with a variety of cellular activities TMO_b0162 SM00829 Enoylreductase TMO_b0167 SM00822 TMO_b0167 TMO_b0171 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_b0171 SM00866 TMO_b0171 TMO_b0187 SM00878 Biotin carboxylase C-terminal domain TMO_b0189 SM00267 diguanylate cyclase TMO_b0191 SM00861 Transketolase, pyrimidine binding domain TMO_b0195 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TMO_b0200 SM00382 ATPases associated with a variety of cellular activities TMO_b0206 SM00829 Enoylreductase TMO_b0208 SM00342 helix_turn_helix, arabinose operon control protein TMO_b0209 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TMO_b0210 SM00100 Cyclic nucleotide-monophosphate binding domain TMO_b0214 SM00342 helix_turn_helix, arabinose operon control protein TMO_b0220 SM00382 ATPases associated with a variety of cellular activities TMO_b0222 SM00965 Secretin and TonB N terminus short domain TMO_b0223 SM00448 cheY-homologous receiver domain TMO_b0223 SM00862 Transcriptional regulatory protein, C terminal TMO_b0225 SM00387 Histidine kinase-like ATPases TMO_b0225 SM00388 His Kinase A (phosphoacceptor) domain TMO_b0226 SM00342 helix_turn_helix, arabinose operon control protein TMO_b0229 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_b0229 SM00091 PAS domain TMO_b0229 SM00911 HWE histidine kinase TMO_b0235 SM00382 ATPases associated with a variety of cellular activities TMO_b0236 SM00382 ATPases associated with a variety of cellular activities TMO_b0249 SM00822 TMO_b0249 TMO_b0250 SM00346 helix_turn_helix isocitrate lyase regulation TMO_b0257 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_b0257 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_b0260 SM00346 helix_turn_helix isocitrate lyase regulation TMO_b0265 SM00382 ATPases associated with a variety of cellular activities TMO_b0270 SM00342 helix_turn_helix, arabinose operon control protein TMO_b0273 SM00419 helix_turn_helix, cAMP Regulatory protein TMO_b0292 SM00881 CoA binding domain TMO_b0303 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TMO_b0303 SM00387 Histidine kinase-like ATPases TMO_b0303 SM00388 His Kinase A (phosphoacceptor) domain TMO_b0306 SM00479 TMO_b0306 TMO_b0315 SM01150 TMO_b0315 TMO_b0317 SM00882 Coenzyme A transferase TMO_b0319 SM00882 Coenzyme A transferase TMO_b0320 SM00923 MbtH-like protein TMO_b0323 SM00823 Phosphopantetheine attachment site TMO_b0324 SM00823 Phosphopantetheine attachment site TMO_b0325 SM00823 Phosphopantetheine attachment site TMO_b0325 SM00824 Thioesterase TMO_b0326 SM01006 Siderophore biosynthesis protein domain TMO_b0331 SM00965 Secretin and TonB N terminus short domain TMO_b0332 SM00382 ATPases associated with a variety of cellular activities TMO_b0335 SM00382 ATPases associated with a variety of cellular activities TMO_b0341 SM00861 Transketolase, pyrimidine binding domain TMO_b0342 SM00344 helix_turn_helix ASNC type TMO_b0344 SM00382 ATPases associated with a variety of cellular activities TMO_b0352 SM00382 ATPases associated with a variety of cellular activities TMO_b0354 SM01007 Class II Aldolase and Adducin N-terminal domain TMO_b0359 SM00046 Diacylglycerol kinase catalytic domain (presumed) TMO_b0369 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_b0370 SM00387 Histidine kinase-like ATPases TMO_b0370 SM00388 His Kinase A (phosphoacceptor) domain TMO_b0370 SM00448 cheY-homologous receiver domain TMO_b0371 SM00421 helix_turn_helix, Lux Regulon TMO_b0371 SM00448 cheY-homologous receiver domain TMO_b0372 SM00382 ATPases associated with a variety of cellular activities TMO_b0379 SM00382 ATPases associated with a variety of cellular activities TMO_b0399 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_b0405 SM00382 ATPases associated with a variety of cellular activities TMO_b0406 SM00382 ATPases associated with a variety of cellular activities TMO_b0411 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_b0416 SM00829 Enoylreductase TMO_b0417 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TMO_b0420 SM00267 diguanylate cyclase TMO_b0422 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_b0422 SM00895 TMO_b0422 TMO_b0430 SM01007 Class II Aldolase and Adducin N-terminal domain TMO_b0437 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_b0437 SM00895 TMO_b0437 TMO_b0443 SM00382 ATPases associated with a variety of cellular activities TMO_b0444 SM00382 ATPases associated with a variety of cellular activities TMO_b0446 SM00903 Flavin reductase like domain TMO_b0449 SM00100 Cyclic nucleotide-monophosphate binding domain TMO_b0449 SM00419 helix_turn_helix, cAMP Regulatory protein TMO_b0451 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TMO_b0457 SM00852 Probable molybdopterin binding domain TMO_b0459 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_b0460 SM00852 Probable molybdopterin binding domain TMO_b0462 SM00267 diguanylate cyclase TMO_b0464 SM00382 ATPases associated with a variety of cellular activities TMO_b0466 SM00062 Bacterial periplasmic substrate-binding proteins TMO_b0467 SM01130 TMO_b0467 TMO_b0476 SM00382 ATPases associated with a variety of cellular activities TMO_b0478 SM00834 Putative regulatory protein TMO_b0483 SM00382 ATPases associated with a variety of cellular activities TMO_b0484 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_b0490 SM00014 Acid phosphatase homologues TMO_b0494 SM00382 ATPases associated with a variety of cellular activities TMO_b0495 SM00382 ATPases associated with a variety of cellular activities TMO_b0498 SM00873 B3/4 domain TMO_b0503 SM00342 helix_turn_helix, arabinose operon control protein TMO_b0504 SM00420 helix_turn_helix, Deoxyribose operon repressor TMO_b0504 SM01134 TMO_b0504 TMO_b0513 SM00342 helix_turn_helix, arabinose operon control protein TMO_b0517 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_b0517 SM00895 TMO_b0517 TMO_b0537 SM00342 helix_turn_helix, arabinose operon control protein TMO_b0539 SM00342 helix_turn_helix, arabinose operon control protein TMO_b0553 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_b0553 SM00866 TMO_b0553 TMO_b0557 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TMO_b0557 SM00419 helix_turn_helix, cAMP Regulatory protein TMO_b0559 SM00421 helix_turn_helix, Lux Regulon TMO_b0562 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_b0562 SM00866 TMO_b0562 TMO_b0572 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_b0572 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_b0584 SM00388 His Kinase A (phosphoacceptor) domain TMO_b0587 SM00470 ParB-like nuclease domain TMO_b0593 SM00342 helix_turn_helix, arabinose operon control protein TMO_b0598 SM00869 Autotransporter beta-domain TMO_c0002 SM00382 ATPases associated with a variety of cellular activities TMO_c0013 SM00448 cheY-homologous receiver domain TMO_c0013 SM00862 Transcriptional regulatory protein, C terminal TMO_c0014 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_c0014 SM00387 Histidine kinase-like ATPases TMO_c0014 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0015 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TMO_c0017 SM00226 Low molecular weight phosphatase family TMO_c0028 SM00953 TMO_c0028 TMO_c0048 SM00382 ATPases associated with a variety of cellular activities TMO_c0060 SM00487 DEAD-like helicases superfamily TMO_c0076 SM00422 helix_turn_helix, mercury resistance TMO_c0084 SM00422 helix_turn_helix, mercury resistance TMO_c0087 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TMO_c0087 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TMO_c0087 SM00493 TMO_c0087 TMO_c0100 SM00869 Autotransporter beta-domain TMO_c0107 SM00400 zinc finger TMO_c0107 SM00493 TMO_c0107 TMO_c0109 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TMO_c0110 SM00851 MGS-like domain TMO_c0110 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TMO_c0114 SM00344 helix_turn_helix ASNC type TMO_c0118 SM00267 diguanylate cyclase TMO_c0121 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_c0121 SM00331 Sigma factor PP2C-like phosphatases TMO_c0125 SM00487 DEAD-like helicases superfamily TMO_c0125 SM00490 helicase superfamily c-terminal domain TMO_c0129 SM00905 Dihydroneopterin aldolase TMO_c0130 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TMO_c0130 SM00465 GIY-YIG type nucleases (URI domain) TMO_c0133 SM00054 EF-hand, calcium binding motif TMO_c0140 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_c0141 SM00448 cheY-homologous receiver domain TMO_c0141 SM00862 Transcriptional regulatory protein, C terminal TMO_c0142 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_c0142 SM00387 Histidine kinase-like ATPases TMO_c0142 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0144 SM00267 diguanylate cyclase TMO_c0149 SM01007 Class II Aldolase and Adducin N-terminal domain TMO_c0173 SM00327 von Willebrand factor (vWF) type A domain TMO_c0174 SM00421 helix_turn_helix, Lux Regulon TMO_c0176 SM00421 helix_turn_helix, Lux Regulon TMO_c0179 SM00028 Tetratricopeptide repeats TMO_c0188 SM00342 helix_turn_helix, arabinose operon control protein TMO_c0195 SM00382 ATPases associated with a variety of cellular activities TMO_c0198 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0201 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_c0208 SM00822 TMO_c0208 TMO_c0212 SM00342 helix_turn_helix, arabinose operon control protein TMO_c0220 SM00382 ATPases associated with a variety of cellular activities TMO_c0230 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TMO_c0230 SM00292 breast cancer carboxy-terminal domain TMO_c0230 SM00532 Ligase N family TMO_c0232 SM00028 Tetratricopeptide repeats TMO_c0233 SM00530 Helix-turn-helix XRE-family like proteins TMO_c0235 SM00864 Tubulin/FtsZ family, GTPase domain TMO_c0235 SM00865 Tubulin/FtsZ family, C-terminal domain TMO_c0236 SM00842 Cell division protein FtsA TMO_c0251 SM00644 TMO_c0251 TMO_c0253 SM00382 ATPases associated with a variety of cellular activities TMO_c0254 SM00108 Bulb-type mannose-specific lectin TMO_c0255 SM00271 DnaJ molecular chaperone homology domain TMO_c0267 SM00530 Helix-turn-helix XRE-family like proteins TMO_c0282 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0302 SM00387 Histidine kinase-like ATPases TMO_c0302 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0307 SM00382 ATPases associated with a variety of cellular activities TMO_c0307 SM00448 cheY-homologous receiver domain TMO_c0311 SM00052 Putative diguanylate phosphodiesterase TMO_c0311 SM00267 diguanylate cyclase TMO_c0325 SM00342 helix_turn_helix, arabinose operon control protein TMO_c0334 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0336 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TMO_c0341 SM00342 helix_turn_helix, arabinose operon control protein TMO_c0349 SM00382 ATPases associated with a variety of cellular activities TMO_c0350 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0350 SM00895 TMO_c0350 TMO_c0356 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0356 SM00895 TMO_c0356 TMO_c0366 SM00530 Helix-turn-helix XRE-family like proteins TMO_c0371 SM00342 helix_turn_helix, arabinose operon control protein TMO_c0374 SM00091 PAS domain TMO_c0374 SM00387 Histidine kinase-like ATPases TMO_c0374 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0389 SM00487 DEAD-like helicases superfamily TMO_c0392 SM00342 helix_turn_helix, arabinose operon control protein TMO_c0394 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0405 SM00382 ATPases associated with a variety of cellular activities TMO_c0415 SM00342 helix_turn_helix, arabinose operon control protein TMO_c0430 SM00382 ATPases associated with a variety of cellular activities TMO_c0431 SM00382 ATPases associated with a variety of cellular activities TMO_c0436 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TMO_c0438 SM00342 helix_turn_helix, arabinose operon control protein TMO_c0443 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0444 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0447 SM00833 Cobalamin synthesis protein cobW C-terminal domain TMO_c0453 SM00382 ATPases associated with a variety of cellular activities TMO_c0454 SM00382 ATPases associated with a variety of cellular activities TMO_c0456 SM00344 helix_turn_helix ASNC type TMO_c0460 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_c0460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_c0461 SM00382 ATPases associated with a variety of cellular activities TMO_c0464 SM00062 Bacterial periplasmic substrate-binding proteins TMO_c0465 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0465 SM00895 TMO_c0465 TMO_c0473 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0488 SM00530 Helix-turn-helix XRE-family like proteins TMO_c0497 SM00382 ATPases associated with a variety of cellular activities TMO_c0499 SM00062 Bacterial periplasmic substrate-binding proteins TMO_c0507 SM01329 TMO_c0507 TMO_c0509 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_c0509 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_c0510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_c0510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_c0511 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_c0511 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_c0515 SM00344 helix_turn_helix ASNC type TMO_c0523 SM00382 ATPases associated with a variety of cellular activities TMO_c0524 SM00387 Histidine kinase-like ATPases TMO_c0524 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0524 SM00448 cheY-homologous receiver domain TMO_c0527 SM00387 Histidine kinase-like ATPases TMO_c0527 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0528 SM00382 ATPases associated with a variety of cellular activities TMO_c0528 SM00448 cheY-homologous receiver domain TMO_c0530 SM00267 diguanylate cyclase TMO_c0530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TMO_c0537 SM00822 TMO_c0537 TMO_c0548 SM00421 helix_turn_helix, Lux Regulon TMO_c0550 SM00822 TMO_c0550 TMO_c0551 SM00342 helix_turn_helix, arabinose operon control protein TMO_c0553 SM00965 Secretin and TonB N terminus short domain TMO_c0561 SM00387 Histidine kinase-like ATPases TMO_c0561 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0562 SM00387 Histidine kinase-like ATPases TMO_c0562 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0569 SM00822 TMO_c0569 TMO_c0571 SM00387 Histidine kinase-like ATPases TMO_c0571 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0571 SM00448 cheY-homologous receiver domain TMO_c0572 SM00421 helix_turn_helix, Lux Regulon TMO_c0572 SM00448 cheY-homologous receiver domain TMO_c0576 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_c0580 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0580 SM00866 TMO_c0580 TMO_c0597 SM00382 ATPases associated with a variety of cellular activities TMO_c0602 SM00823 Phosphopantetheine attachment site TMO_c0603 SM00822 TMO_c0603 TMO_c0603 SM00823 Phosphopantetheine attachment site TMO_c0603 SM01294 TMO_c0603 TMO_c0604 SM00823 Phosphopantetheine attachment site TMO_c0605 SM00823 Phosphopantetheine attachment site TMO_c0606 SM00822 TMO_c0606 TMO_c0606 SM00823 Phosphopantetheine attachment site TMO_c0606 SM00825 Beta-ketoacyl synthase TMO_c0607 SM00822 TMO_c0607 TMO_c0607 SM00823 Phosphopantetheine attachment site TMO_c0608 SM00823 Phosphopantetheine attachment site TMO_c0608 SM00825 Beta-ketoacyl synthase TMO_c0609 SM00823 Phosphopantetheine attachment site TMO_c0610 SM00823 Phosphopantetheine attachment site TMO_c0611 SM00823 Phosphopantetheine attachment site TMO_c0611 SM00824 Thioesterase TMO_c0612 SM00923 MbtH-like protein TMO_c0620 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0620 SM00895 TMO_c0620 TMO_c0636 SM00642 Alpha-amylase domain TMO_c0642 SM00342 helix_turn_helix, arabinose operon control protein TMO_c0644 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0644 SM00895 TMO_c0644 TMO_c0650 SM01236 TMO_c0650 TMO_c0657 SM00346 helix_turn_helix isocitrate lyase regulation TMO_c0664 SM00530 Helix-turn-helix XRE-family like proteins TMO_c0673 SM00346 helix_turn_helix isocitrate lyase regulation TMO_c0676 SM00422 helix_turn_helix, mercury resistance TMO_c0680 SM00867 YceI-like domain TMO_c0681 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_c0691 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TMO_c0696 SM00729 Elongator protein 3, MiaB family, Radical SAM TMO_c0697 SM00421 helix_turn_helix, Lux Regulon TMO_c0701 SM00937 TMO_c0701 TMO_c0703 SM00646 TMO_c0703 TMO_c0704 SM00316 Ribosomal protein S1-like RNA-binding domain TMO_c0711 SM00966 SpoVT / AbrB like domain TMO_c0715 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TMO_c0715 SM00091 PAS domain TMO_c0715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TMO_c0719 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_c0721 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TMO_c0727 SM00823 Phosphopantetheine attachment site TMO_c0733 SM00878 Biotin carboxylase C-terminal domain TMO_c0734 SM01119 TMO_c0734 TMO_c0749 SM00382 ATPases associated with a variety of cellular activities TMO_c0750 SM00382 ATPases associated with a variety of cellular activities TMO_c0759 SM00382 ATPases associated with a variety of cellular activities TMO_c0767 SM00382 ATPases associated with a variety of cellular activities TMO_c0771 SM00382 ATPases associated with a variety of cellular activities TMO_c0772 SM00849 Metallo-beta-lactamase superfamily TMO_c0778 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TMO_c0780 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TMO_c0785 SM00422 helix_turn_helix, mercury resistance TMO_c0787 SM00530 Helix-turn-helix XRE-family like proteins TMO_c0792 SM00382 ATPases associated with a variety of cellular activities TMO_c0802 SM00387 Histidine kinase-like ATPases TMO_c0802 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0804 SM00823 Phosphopantetheine attachment site TMO_c0804 SM01294 TMO_c0804 TMO_c0812 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TMO_c0819 SM00345 helix_turn_helix gluconate operon transcriptional repressor TMO_c0824 SM00878 Biotin carboxylase C-terminal domain TMO_c0826 SM00530 Helix-turn-helix XRE-family like proteins TMO_c0828 SM00342 helix_turn_helix, arabinose operon control protein TMO_c0837 SM00382 ATPases associated with a variety of cellular activities TMO_c0845 SM00387 Histidine kinase-like ATPases TMO_c0845 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0848 SM00986 Uracil DNA glycosylase superfamily TMO_c0848 SM00987 UreE urease accessory protein, C-terminal domain TMO_c0849 SM00382 ATPases associated with a variety of cellular activities TMO_c0852 SM00861 Transketolase, pyrimidine binding domain TMO_c0854 SM00822 TMO_c0854 TMO_c0859 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TMO_c0871 SM00829 Enoylreductase TMO_c0872 SM00387 Histidine kinase-like ATPases TMO_c0872 SM00388 His Kinase A (phosphoacceptor) domain TMO_c0877 SM00052 Putative diguanylate phosphodiesterase TMO_c0879 SM00530 Helix-turn-helix XRE-family like proteins TMO_c0880 SM00382 ATPases associated with a variety of cellular activities TMO_c0884 SM00052 Putative diguanylate phosphodiesterase TMO_c0884 SM00267 diguanylate cyclase TMO_c0889 SM00347 helix_turn_helix multiple antibiotic resistance protein TMO_c0890 SM00346 helix_turn_helix isocitrate lyase regulation TMO_c0892 SM00861 Transketolase, pyrimidine binding domain TMO_c0894 SM00112 Cadherin repeats. TMO_c0895 SM00112 Cadherin repeats. TMO_c0895 SM00736 Dystroglycan-type cadherin-like domains. TMO_c0896 SM00710 Parallel beta-helix repeats TMO_c0928 SM00382 ATPases associated with a variety of cellular activities TMO_c0929 SM00382 ATPases associated with a variety of cellular activities TMO_d0001 SM00671 Sel1-like repeats. TMO_d0005 SM00342 helix_turn_helix, arabinose operon control protein TMO_d0006 SM00387 Histidine kinase-like ATPases TMO_d0006 SM00388 His Kinase A (phosphoacceptor) domain TMO_d0007 SM00732 Likely ribonuclease with RNase H fold. TMO_d0010 SM00845 GatB domain TMO_d0018 SM00382 ATPases associated with a variety of cellular activities TMO_d0018 SM00930 TMO_d0018 TMO_d0027 SM00420 helix_turn_helix, Deoxyribose operon repressor TMO_d0027 SM01134 TMO_d0027 TMO_d0029 SM00382 ATPases associated with a variety of cellular activities TMO_d0035 SM00420 helix_turn_helix, Deoxyribose operon repressor TMO_d0035 SM01134 TMO_d0035 TMO_d0042 SM00530 Helix-turn-helix XRE-family like proteins TMO_d0043 SM00062 Bacterial periplasmic substrate-binding proteins TMO_d0045 SM00382 ATPases associated with a variety of cellular activities TMO_d0048 SM00382 ATPases associated with a variety of cellular activities TMO_d0049 SM00382 ATPases associated with a variety of cellular activities TMO_d0053 SM00965 Secretin and TonB N terminus short domain TMO_d0059 SM00244 prohibitin homologues TMO_d0060 SM00244 prohibitin homologues TMO_d0063 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2.