TMO_c0763 5b008ef5a2402a07c5a53d13bd530ade 927 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 25 1.5E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_c0763 5b008ef5a2402a07c5a53d13bd530ade 927 SUPERFAMILY SSF56003 253 926 1.27E-111 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TMO_c0763 5b008ef5a2402a07c5a53d13bd530ade 927 Gene3D G3DSA:3.30.365.10 765 926 1.3E-35 T 14-10-2018 TMO_c0763 5b008ef5a2402a07c5a53d13bd530ade 927 Gene3D G3DSA:3.30.365.20 505 626 1.8E-7 T 14-10-2018 TMO_c0763 5b008ef5a2402a07c5a53d13bd530ade 927 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 250 866 3.6E-74 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_c0763 5b008ef5a2402a07c5a53d13bd530ade 927 SUPERFAMILY SSF54665 51 175 1.06E-8 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily TMO_c0763 5b008ef5a2402a07c5a53d13bd530ade 927 Gene3D G3DSA:3.30.365.10 262 486 7.0E-48 T 14-10-2018 TMO_c0763 5b008ef5a2402a07c5a53d13bd530ade 927 Gene3D G3DSA:3.30.365.10 274 370 7.0E-48 T 14-10-2018 TMO_0419 db23acf897fb6742edce9df103c48d6c 336 SUPERFAMILY SSF53822 62 314 3.61E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_0419 db23acf897fb6742edce9df103c48d6c 336 Gene3D G3DSA:3.40.50.2300 162 324 3.8E-72 T 14-10-2018 TMO_0419 db23acf897fb6742edce9df103c48d6c 336 Pfam PF13377 Periplasmic binding protein-like domain 170 327 2.0E-31 T 14-10-2018 TMO_0419 db23acf897fb6742edce9df103c48d6c 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-10-2018 TMO_0419 db23acf897fb6742edce9df103c48d6c 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 51 1.3E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TMO_0419 db23acf897fb6742edce9df103c48d6c 336 SMART SM00354 5 74 1.4E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TMO_0419 db23acf897fb6742edce9df103c48d6c 336 Gene3D G3DSA:3.40.50.2300 65 319 3.8E-72 T 14-10-2018 TMO_0419 db23acf897fb6742edce9df103c48d6c 336 SUPERFAMILY SSF47413 5 62 2.72E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0419 db23acf897fb6742edce9df103c48d6c 336 Gene3D G3DSA:1.10.260.40 4 62 1.8E-19 T 14-10-2018 TMO_3415 4e4525fcb3076985c8b58b9026ed50fb 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 316 1.4E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_3415 4e4525fcb3076985c8b58b9026ed50fb 461 SUPERFAMILY SSF116878 129 461 1.83E-45 T 14-10-2018 TMO_3415 4e4525fcb3076985c8b58b9026ed50fb 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 461 1.7E-84 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TMO_3415 4e4525fcb3076985c8b58b9026ed50fb 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 461 30.792 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TMO_3415 4e4525fcb3076985c8b58b9026ed50fb 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 128 1.8E-33 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 TMO_3415 4e4525fcb3076985c8b58b9026ed50fb 461 Pfam PF01926 50S ribosome-binding GTPase 227 320 9.9E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_3415 4e4525fcb3076985c8b58b9026ed50fb 461 Pfam PF12631 MnmE helical domain 131 458 1.2E-52 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 TMO_3415 4e4525fcb3076985c8b58b9026ed50fb 461 Gene3D G3DSA:3.30.1360.120 1 129 1.4E-38 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TMO_3415 4e4525fcb3076985c8b58b9026ed50fb 461 Gene3D G3DSA:3.40.50.300 225 388 1.5E-101 T 14-10-2018 TMO_3415 4e4525fcb3076985c8b58b9026ed50fb 461 SUPERFAMILY SSF52540 81 377 6.11E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3415 4e4525fcb3076985c8b58b9026ed50fb 461 Gene3D G3DSA:1.20.120.430 130 461 1.5E-101 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 TMO_0901 a6d2c31d3a365996dfcb55894a62d5b3 144 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 14 126 6.4E-27 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TMO_0901 a6d2c31d3a365996dfcb55894a62d5b3 144 SUPERFAMILY SSF54637 12 136 5.92E-40 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0901 a6d2c31d3a365996dfcb55894a62d5b3 144 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 13 134 8.0E-45 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 TMO_0901 a6d2c31d3a365996dfcb55894a62d5b3 144 PIRSF PIRSF003230 4 143 5.5E-41 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TMO_0901 a6d2c31d3a365996dfcb55894a62d5b3 144 Gene3D G3DSA:3.10.129.10 10 140 3.0E-39 T 14-10-2018 TMO_0901 a6d2c31d3a365996dfcb55894a62d5b3 144 Pfam PF03061 Thioesterase superfamily 26 110 2.7E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00388 904 969 8.7E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 510 633 4.6E-17 T 14-10-2018 IPR000014 PAS domain TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF12860 PAS fold 773 888 1.5E-28 T 14-10-2018 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF12860 PAS fold 646 759 1.8E-30 T 14-10-2018 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF12860 PAS fold 398 505 1.4E-23 T 14-10-2018 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00304 318 371 1.1E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.565.10 968 1134 3.6E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 503 625 2.7E-23 T 14-10-2018 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF02743 Cache domain 40 211 2.0E-16 T 14-10-2018 IPR033479 Double Cache domain 1 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF55785 499 624 2.36E-23 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:1.20.1480.50 283 377 1.7E-9 T 14-10-2018 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00091 389 455 6.4 T 14-10-2018 IPR000014 PAS domain TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00091 767 835 15.0 T 14-10-2018 IPR000014 PAS domain TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00091 514 579 9.2E-9 T 14-10-2018 IPR000014 PAS domain TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00091 640 708 310.0 T 14-10-2018 IPR000014 PAS domain TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF55785 382 500 9.95E-5 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00387 1016 1134 1.8E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 760 880 1.0E-6 T 14-10-2018 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF55785 752 882 5.23E-11 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:1.10.287.130 881 967 5.7E-23 T 14-10-2018 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF47384 887 970 8.04E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 31 183 1.7E-30 T 14-10-2018 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1076 1086 1.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1094 1112 1.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1058 1072 1.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1118 1131 1.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF08448 PAS fold 521 629 2.9E-12 T 14-10-2018 IPR013656 PAS fold-4 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF52172 1180 1299 1.57E-37 T 14-10-2018 IPR011006 CheY-like superfamily TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 378 502 7.4E-7 T 14-10-2018 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 629 759 3.4E-11 T 14-10-2018 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.40.50.12740 1179 1316 1.1E-41 T 14-10-2018 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00448 1180 1294 1.8E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1016 1132 1.2E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF55874 958 1136 5.76E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF00512 His Kinase A (phospho-acceptor) domain 904 969 1.0E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF55785 625 753 8.55E-10 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF00072 Response regulator receiver domain 1182 1295 2.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00086 585 628 0.0017 T 14-10-2018 IPR001610 PAC motif TMO_0158 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 186 282 5.0E-6 T 14-10-2018 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 SUPERFAMILY SSF82714 187 268 5.49E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 Gene3D G3DSA:1.20.1640.10 504 1006 2.4E-232 T 14-10-2018 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 Gene3D G3DSA:3.30.70.1320 139 328 2.4E-232 T 14-10-2018 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 Gene3D G3DSA:3.30.70.1440 655 854 2.4E-232 T 14-10-2018 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 SUPERFAMILY SSF82693 42 136 1.99E-16 T 14-10-2018 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 Gene3D G3DSA:1.20.1640.10 14 503 2.4E-232 T 14-10-2018 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 SUPERFAMILY SSF82866 296 490 1.57E-34 T 14-10-2018 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 SUPERFAMILY SSF82693 141 325 9.42E-15 T 14-10-2018 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 SUPERFAMILY SSF82866 792 1013 5.89E-43 T 14-10-2018 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 Gene3D G3DSA:3.30.2090.10 706 794 2.4E-232 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.1E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.1E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 1.1E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.1E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.1E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.1E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 SUPERFAMILY SSF82693 554 642 5.93E-6 T 14-10-2018 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 Gene3D G3DSA:3.30.2090.10 181 270 2.4E-232 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 Gene3D G3DSA:3.30.70.1430 42 802 2.4E-232 T 14-10-2018 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 Pfam PF00873 AcrB/AcrD/AcrF family 6 1008 4.0E-136 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 SUPERFAMILY SSF82714 707 792 5.23E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_a0269 b6dd3fecc57f7fe312876ab3117f1d30 1015 Gene3D G3DSA:3.30.70.1430 555 654 2.4E-232 T 14-10-2018 TMO_2195 205aef462c44984a0fd8f9b0f99e626e 306 Gene3D G3DSA:3.30.450.90 2 107 1.2E-14 T 14-10-2018 TMO_2195 205aef462c44984a0fd8f9b0f99e626e 306 Pfam PF00437 Type II/IV secretion system protein 11 275 5.8E-83 T 14-10-2018 IPR001482 Type II/IV secretion system protein TMO_2195 205aef462c44984a0fd8f9b0f99e626e 306 Gene3D G3DSA:3.40.50.300 108 301 2.0E-50 T 14-10-2018 TMO_2195 205aef462c44984a0fd8f9b0f99e626e 306 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 1 297 6.3E-130 T 14-10-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 TMO_2195 205aef462c44984a0fd8f9b0f99e626e 306 SUPERFAMILY SSF52540 12 272 1.74E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0324 abcc168d344aa0fa27507404245b085a 157 TIGRFAM TIGR00673 cynS: cyanase 18 157 1.3E-50 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TMO_0324 abcc168d344aa0fa27507404245b085a 157 Gene3D G3DSA:3.30.1160.10 91 157 5.4E-36 T 14-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 TMO_0324 abcc168d344aa0fa27507404245b085a 157 SMART SM01116 85 157 6.3E-50 T 14-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 TMO_0324 abcc168d344aa0fa27507404245b085a 157 SUPERFAMILY SSF47413 14 87 1.91E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0324 abcc168d344aa0fa27507404245b085a 157 Hamap MF_00535 Cyanate hydratase [cynS]. 1 157 73.27 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TMO_0324 abcc168d344aa0fa27507404245b085a 157 SUPERFAMILY SSF55234 90 157 1.57E-30 T 14-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 TMO_0324 abcc168d344aa0fa27507404245b085a 157 Gene3D G3DSA:1.10.260.40 6 88 5.6E-22 T 14-10-2018 TMO_0324 abcc168d344aa0fa27507404245b085a 157 PIRSF PIRSF001263 7 157 3.1E-52 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TMO_0324 abcc168d344aa0fa27507404245b085a 157 PRINTS PR01693 Cyanase signature 25 40 8.1E-28 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TMO_0324 abcc168d344aa0fa27507404245b085a 157 PRINTS PR01693 Cyanase signature 93 107 8.1E-28 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TMO_0324 abcc168d344aa0fa27507404245b085a 157 PRINTS PR01693 Cyanase signature 45 62 8.1E-28 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TMO_0324 abcc168d344aa0fa27507404245b085a 157 PRINTS PR01693 Cyanase signature 111 127 8.1E-28 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TMO_0324 abcc168d344aa0fa27507404245b085a 157 PRINTS PR01693 Cyanase signature 142 152 8.1E-28 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TMO_0324 abcc168d344aa0fa27507404245b085a 157 Pfam PF02560 Cyanate lyase C-terminal domain 89 155 5.9E-38 T 14-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 2 14 2.1E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 350 362 2.1E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 15 25 2.1E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 31 43 2.1E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 318 324 2.1E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 76 88 2.1E-25 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 SUPERFAMILY SSF54373 231 324 8.24E-7 T 14-10-2018 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 Gene3D G3DSA:3.50.50.60 3 369 1.7E-131 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 7 24 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 SUPERFAMILY SSF51905 2 372 1.41E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 Gene3D G3DSA:1.10.8.870 402 472 6.2E-18 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 Gene3D G3DSA:3.30.9.10 80 325 1.7E-131 T 14-10-2018 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 390 490 3.3E-11 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_0443 2736eb1edb96d3013a8d93546acf669d 510 Pfam PF01266 FAD dependent oxidoreductase 3 360 2.9E-55 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_1825 411cbb5b3c04ce509ce1b5d859a9aaee 432 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 231 247 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_1825 411cbb5b3c04ce509ce1b5d859a9aaee 432 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 430 53.306 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_1825 411cbb5b3c04ce509ce1b5d859a9aaee 432 Pfam PF00464 Serine hydroxymethyltransferase 20 394 1.1E-178 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_1825 411cbb5b3c04ce509ce1b5d859a9aaee 432 Gene3D G3DSA:3.90.1150.10 21 401 2.0E-185 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_1825 411cbb5b3c04ce509ce1b5d859a9aaee 432 PIRSF PIRSF000412 2 432 2.1E-171 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_1825 411cbb5b3c04ce509ce1b5d859a9aaee 432 SUPERFAMILY SSF53383 14 430 4.13E-183 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_1825 411cbb5b3c04ce509ce1b5d859a9aaee 432 Gene3D G3DSA:3.40.640.10 46 297 2.0E-185 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 3.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 3.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 3.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 3.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 467 8.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 Gene3D G3DSA:1.10.287.130 227 301 3.2E-24 T 14-10-2018 TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 Gene3D G3DSA:3.30.450.20 105 226 8.0E-7 T 14-10-2018 TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 SMART SM00387 344 468 1.6E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 SUPERFAMILY SSF55874 287 466 2.1E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 Gene3D G3DSA:3.30.565.10 304 470 1.8E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 SUPERFAMILY SSF47384 218 298 3.73E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 SMART SM00388 231 298 8.6E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 SUPERFAMILY SSF55785 106 207 3.05E-7 T 14-10-2018 IPR035965 PAS domain superfamily TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 296 3.6E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_3503 0a6330f94db678d00b5641de79f3cc06 480 Pfam PF08448 PAS fold 123 224 2.1E-6 T 14-10-2018 IPR013656 PAS fold-4 TMO_3142 f8b6b3e49cbdd5ba249ec984569b7597 226 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 65 219 2.2E-28 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like TMO_3142 f8b6b3e49cbdd5ba249ec984569b7597 226 Gene3D G3DSA:2.50.20.10 53 225 1.1E-29 T 14-10-2018 TMO_3142 f8b6b3e49cbdd5ba249ec984569b7597 226 SUPERFAMILY SSF89392 56 220 2.55E-34 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX TMO_1776 d77d3f5d178dc079b799469ae586874b 351 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 345 9.1E-125 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TMO_1776 d77d3f5d178dc079b799469ae586874b 351 Pfam PF13288 DXP reductoisomerase C-terminal domain 226 342 2.3E-40 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TMO_1776 d77d3f5d178dc079b799469ae586874b 351 PIRSF PIRSF006205 1 351 9.1E-129 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TMO_1776 d77d3f5d178dc079b799469ae586874b 351 Gene3D G3DSA:1.10.1740.10 267 350 1.5E-27 T 14-10-2018 TMO_1776 d77d3f5d178dc079b799469ae586874b 351 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 111 194 5.9E-38 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TMO_1776 d77d3f5d178dc079b799469ae586874b 351 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 97 3.5E-23 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TMO_1776 d77d3f5d178dc079b799469ae586874b 351 SUPERFAMILY SSF69055 257 348 9.16E-30 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TMO_1776 d77d3f5d178dc079b799469ae586874b 351 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 347 38.482 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TMO_1776 d77d3f5d178dc079b799469ae586874b 351 Gene3D G3DSA:3.40.50.720 1 115 2.6E-31 T 14-10-2018 TMO_1776 d77d3f5d178dc079b799469ae586874b 351 SUPERFAMILY SSF51735 1 115 6.82E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1776 d77d3f5d178dc079b799469ae586874b 351 SUPERFAMILY SSF55347 91 229 2.91E-58 T 14-10-2018 TMO_0438 3fc38c14388f551d8f8b26c263c42177 321 SMART SM00342 226 311 5.0E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0438 3fc38c14388f551d8f8b26c263c42177 321 Pfam PF12833 Helix-turn-helix domain 232 312 2.3E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0438 3fc38c14388f551d8f8b26c263c42177 321 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 262 307 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_0438 3fc38c14388f551d8f8b26c263c42177 321 SUPERFAMILY SSF46689 262 314 1.39E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0438 3fc38c14388f551d8f8b26c263c42177 321 Pfam PF14525 AraC-binding-like domain 19 193 3.0E-22 T 14-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like TMO_0438 3fc38c14388f551d8f8b26c263c42177 321 Gene3D G3DSA:1.10.10.60 207 318 7.8E-21 T 14-10-2018 TMO_c0883 5cc72933a6e26e72457a11ed07780461 337 Gene3D G3DSA:3.40.190.10 33 310 6.9E-66 T 14-10-2018 TMO_c0883 5cc72933a6e26e72457a11ed07780461 337 Gene3D G3DSA:3.40.190.10 112 218 6.9E-66 T 14-10-2018 TMO_c0883 5cc72933a6e26e72457a11ed07780461 337 SUPERFAMILY SSF53850 32 260 1.36E-27 T 14-10-2018 TMO_c0883 5cc72933a6e26e72457a11ed07780461 337 Pfam PF09084 NMT1/THI5 like 41 259 5.1E-42 T 14-10-2018 IPR015168 SsuA/THI5-like TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 498 505 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 Gene3D G3DSA:1.10.10.60 459 517 6.9E-21 T 14-10-2018 TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 PIRSF PIRSF000774 1 520 1.5E-138 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 49 1.3E-15 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 Pfam PF04552 Sigma-54, DNA binding domain 359 518 4.9E-68 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 Pfam PF04963 Sigma-54 factor, core binding domain 157 344 1.5E-44 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 406 425 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 PRINTS PR00045 Sigma-54 factor signature 418 430 2.6E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 PRINTS PR00045 Sigma-54 factor signature 493 511 2.6E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 PRINTS PR00045 Sigma-54 factor signature 434 445 2.6E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 PRINTS PR00045 Sigma-54 factor signature 230 247 2.6E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 Gene3D G3DSA:1.10.10.1330 164 284 3.9E-21 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily TMO_0177 0f7138f5cee2524b5a64a5b98aa5c26f 524 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 517 3.2E-120 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 98 197 8.3E-32 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 SUPERFAMILY SSF54719 91 200 2.1E-37 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 88 1.6E-24 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 Gene3D G3DSA:1.10.287.990 21 89 6.0E-23 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 Gene3D G3DSA:2.40.500.20 91 202 4.2E-36 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 PIRSF PIRSF000349 1 202 1.2E-70 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 5.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 5.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 5.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 5.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_c0533 f8d4537f4734213e63e96e67f42a018d 202 SUPERFAMILY SSF46609 3 90 9.17E-29 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1382 6c28166f3ca80a7c3fdecc758be90899 202 SUPERFAMILY SSF48498 82 195 6.85E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1382 6c28166f3ca80a7c3fdecc758be90899 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1382 6c28166f3ca80a7c3fdecc758be90899 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1382 6c28166f3ca80a7c3fdecc758be90899 202 SUPERFAMILY SSF46689 3 83 9.22E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1382 6c28166f3ca80a7c3fdecc758be90899 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1382 6c28166f3ca80a7c3fdecc758be90899 202 Gene3D G3DSA:1.10.357.10 2 194 9.4E-37 T 14-10-2018 TMO_b0131 f8740ae380f2139da87260ecab779b7f 430 Pfam PF05226 CHASE2 domain 61 321 1.6E-13 T 14-10-2018 IPR007890 CHASE2 TMO_2706 1e120841573adbfce2cb604432a09359 288 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 143 177 4.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_2706 1e120841573adbfce2cb604432a09359 288 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 186 221 1.3E-10 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_2706 1e120841573adbfce2cb604432a09359 288 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 12 288 7.8E-120 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 TMO_2706 1e120841573adbfce2cb604432a09359 288 Gene3D G3DSA:1.10.166.10 9 78 1.3E-28 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 TMO_2706 1e120841573adbfce2cb604432a09359 288 SUPERFAMILY SSF51161 11 272 1.8E-64 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_2706 1e120841573adbfce2cb604432a09359 288 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 9 288 54.964 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 TMO_2706 1e120841573adbfce2cb604432a09359 288 Gene3D G3DSA:2.160.10.10 98 273 2.0E-51 T 14-10-2018 TMO_2706 1e120841573adbfce2cb604432a09359 288 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 12 77 1.7E-23 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 TMO_3255 95f3e75ff57454cc17d72e6052b59c5b 352 Gene3D G3DSA:3.30.360.10 129 321 5.4E-86 T 14-10-2018 TMO_3255 95f3e75ff57454cc17d72e6052b59c5b 352 Gene3D G3DSA:3.40.50.720 5 335 5.4E-86 T 14-10-2018 TMO_3255 95f3e75ff57454cc17d72e6052b59c5b 352 SUPERFAMILY SSF55347 134 325 6.22E-37 T 14-10-2018 TMO_3255 95f3e75ff57454cc17d72e6052b59c5b 352 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 322 7.8E-22 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TMO_3255 95f3e75ff57454cc17d72e6052b59c5b 352 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 118 1.2E-11 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_3255 95f3e75ff57454cc17d72e6052b59c5b 352 SMART SM00859 4 120 7.7E-7 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_3255 95f3e75ff57454cc17d72e6052b59c5b 352 SUPERFAMILY SSF51735 5 157 6.94E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3255 95f3e75ff57454cc17d72e6052b59c5b 352 PIRSF PIRSF000148 4 343 5.3E-69 T 14-10-2018 TMO_0581 a3fec1f23c091b544f290d7e4e69d3ef 474 Gene3D G3DSA:1.10.287.950 9 304 4.4E-50 T 14-10-2018 TMO_0581 a3fec1f23c091b544f290d7e4e69d3ef 474 SUPERFAMILY SSF58104 17 296 3.79E-53 T 14-10-2018 TMO_0581 a3fec1f23c091b544f290d7e4e69d3ef 474 SMART SM00283 38 299 1.4E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0581 a3fec1f23c091b544f290d7e4e69d3ef 474 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 165 194 5.8E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0581 a3fec1f23c091b544f290d7e4e69d3ef 474 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 62 91 5.8E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0581 a3fec1f23c091b544f290d7e4e69d3ef 474 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 136 163 5.8E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0581 a3fec1f23c091b544f290d7e4e69d3ef 474 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 91 264 4.9E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_1573 24a6c51cfe33b07228a225cee3e419bd 394 Pfam PF01702 Queuine tRNA-ribosyltransferase 149 382 1.7E-84 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TMO_1573 24a6c51cfe33b07228a225cee3e419bd 394 Gene3D G3DSA:3.20.20.105 12 388 4.1E-161 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TMO_1573 24a6c51cfe33b07228a225cee3e419bd 394 SUPERFAMILY SSF51713 23 383 1.83E-154 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TMO_1573 24a6c51cfe33b07228a225cee3e419bd 394 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 25 382 2.9E-145 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TMO_1573 24a6c51cfe33b07228a225cee3e419bd 394 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 23 385 54.329 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TMO_1573 24a6c51cfe33b07228a225cee3e419bd 394 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 25 384 1.1E-149 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 8.3E-62 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 8.3E-62 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 8.3E-62 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 8.3E-62 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 8.3E-62 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 8.3E-62 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 Gene3D G3DSA:2.40.50.140 1 123 1.4E-63 T 14-10-2018 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 SUPERFAMILY SSF50249 2 123 9.42E-53 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.7E-69 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 Pfam PF00164 Ribosomal protein S12/S23 17 123 3.5E-43 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 PIRSF PIRSF002133 1 123 1.9E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2637 9bf27cab6d90b95a3e155e1f71f1cd15 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.92 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0747 9c43f8eb3d2d14182dc0f1e7e916b44d 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 385 8.0E-104 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_0747 9c43f8eb3d2d14182dc0f1e7e916b44d 394 PIRSF PIRSF001434 2 389 1.4E-117 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_0747 9c43f8eb3d2d14182dc0f1e7e916b44d 394 Gene3D G3DSA:3.40.640.10 11 260 3.6E-72 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0747 9c43f8eb3d2d14182dc0f1e7e916b44d 394 SUPERFAMILY SSF53383 37 387 2.33E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_0747 9c43f8eb3d2d14182dc0f1e7e916b44d 394 Gene3D G3DSA:3.90.1150.10 262 393 1.4E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_0747 9c43f8eb3d2d14182dc0f1e7e916b44d 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_2433 834bbfb03bc7c68c91209ba86862b338 194 SUPERFAMILY SSF49482 4 194 1.19E-45 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_2433 834bbfb03bc7c68c91209ba86862b338 194 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 8 194 3.2E-61 T 14-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 TMO_2433 834bbfb03bc7c68c91209ba86862b338 194 Pfam PF00775 Dioxygenase 41 111 1.8E-9 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 TMO_2433 834bbfb03bc7c68c91209ba86862b338 194 Gene3D G3DSA:2.60.130.10 2 194 1.2E-59 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 1.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 175 0.0021 T 14-10-2018 TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 4.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 SUPERFAMILY SSF51735 9 263 5.16E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 261 1.4E-61 T 14-10-2018 TMO_c0854 023e4943b641fe51fac4a58cacae8091 264 Gene3D G3DSA:3.40.50.720 9 264 5.3E-84 T 14-10-2018 TMO_c0284 33d830be476e3acb2526f5bfccd47bcb 328 Pfam PF01794 Ferric reductase like transmembrane component 93 205 1.8E-13 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain TMO_0773 e0f8a6a4cbd9f449fc357e948fb1c9fc 192 SUPERFAMILY SSF53955 15 178 9.0E-41 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_0773 e0f8a6a4cbd9f449fc357e948fb1c9fc 192 Pfam PF09374 Predicted Peptidoglycan domain 107 174 1.1E-10 T 14-10-2018 IPR018537 Peptidoglycan binding domain TMO_0773 e0f8a6a4cbd9f449fc357e948fb1c9fc 192 Gene3D G3DSA:1.20.141.10 12 184 8.5E-46 T 14-10-2018 TMO_0773 e0f8a6a4cbd9f449fc357e948fb1c9fc 192 Pfam PF05838 Glycosyl hydrolase 108 20 104 2.7E-22 T 14-10-2018 IPR008565 Protein of unknown function DUF847 TMO_d0007 29773ec33fc17048dd2507d7dc9cd930 202 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 48 182 1.3E-27 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 TMO_d0007 29773ec33fc17048dd2507d7dc9cd930 202 SUPERFAMILY SSF53098 45 184 6.98E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_d0007 29773ec33fc17048dd2507d7dc9cd930 202 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 45 185 23.561 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 TMO_d0007 29773ec33fc17048dd2507d7dc9cd930 202 Pfam PF03652 Holliday junction resolvase 46 182 2.3E-37 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 TMO_d0007 29773ec33fc17048dd2507d7dc9cd930 202 SMART SM00732 45 150 9.1E-33 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 TMO_d0007 29773ec33fc17048dd2507d7dc9cd930 202 Gene3D G3DSA:3.30.420.140 44 188 4.6E-41 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 TMO_3261 ccaf740676a055165205a34f60555ca6 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 3.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_3261 ccaf740676a055165205a34f60555ca6 227 SUPERFAMILY SSF46689 17 92 6.67E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_3261 ccaf740676a055165205a34f60555ca6 227 SUPERFAMILY SSF48498 97 212 6.82E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_3261 ccaf740676a055165205a34f60555ca6 227 Gene3D G3DSA:1.10.357.10 16 221 1.3E-26 T 14-10-2018 TMO_3261 ccaf740676a055165205a34f60555ca6 227 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 125 193 3.6E-6 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SUPERFAMILY SSF55785 736 864 1.5E-27 T 14-10-2018 IPR035965 PAS domain superfamily TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 370 492 4.9E-14 T 14-10-2018 IPR000014 PAS domain TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 747 869 6.1E-25 T 14-10-2018 IPR000014 PAS domain TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM00086 701 739 370.0 T 14-10-2018 IPR001610 PAC motif TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM00086 827 867 270.0 T 14-10-2018 IPR001610 PAC motif TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM00086 445 487 4.1E-4 T 14-10-2018 IPR001610 PAC motif TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Gene3D G3DSA:3.30.565.10 974 1138 2.1E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Gene3D G3DSA:1.20.120.160 1436 1545 1.4E-12 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SUPERFAMILY SSF55785 365 485 1.15E-17 T 14-10-2018 IPR035965 PAS domain superfamily TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM00448 1156 1270 6.2E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM00448 1299 1415 1.8E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Pfam PF03924 CHASE domain 90 264 2.5E-40 T 14-10-2018 IPR006189 CHASE domain TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Gene3D G3DSA:3.30.450.20 627 738 5.0E-18 T 14-10-2018 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SUPERFAMILY SSF55785 485 601 9.95E-10 T 14-10-2018 IPR035965 PAS domain superfamily TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Pfam PF08448 PAS fold 383 488 7.0E-10 T 14-10-2018 IPR013656 PAS fold-4 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Pfam PF08448 PAS fold 651 740 1.7E-9 T 14-10-2018 IPR013656 PAS fold-4 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM00388 908 973 5.6E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Pfam PF00989 PAS fold 752 863 1.1E-17 T 14-10-2018 IPR013767 PAS fold GO:0006355 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Pfam PF12860 PAS fold 507 615 2.3E-12 T 14-10-2018 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM00091 751 817 4.8E-12 T 14-10-2018 IPR000014 PAS domain TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM00091 499 565 11.0 T 14-10-2018 IPR000014 PAS domain TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM00091 374 439 1.6 T 14-10-2018 IPR000014 PAS domain TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM00091 627 698 5.4 T 14-10-2018 IPR000014 PAS domain TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SUPERFAMILY SSF47384 895 973 1.92E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Gene3D G3DSA:3.40.50.2300 1279 1419 3.3E-40 T 14-10-2018 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Gene3D G3DSA:3.30.450.350 91 288 5.4E-18 T 14-10-2018 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Gene3D G3DSA:1.10.287.130 872 971 2.4E-27 T 14-10-2018 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SUPERFAMILY SSF52172 1154 1277 6.97E-19 T 14-10-2018 IPR011006 CheY-like superfamily TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM00387 1020 1137 4.6E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1020 1136 9.6E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Gene3D G3DSA:3.30.450.20 360 493 1.1E-18 T 14-10-2018 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Pfam PF00512 His Kinase A (phospho-acceptor) domain 908 972 8.2E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Pfam PF00072 Response regulator receiver domain 1159 1270 1.7E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Pfam PF00072 Response regulator receiver domain 1301 1415 8.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SMART SM01079 86 275 9.4E-47 T 14-10-2018 IPR006189 CHASE domain TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SUPERFAMILY SSF55785 608 732 1.12E-12 T 14-10-2018 IPR035965 PAS domain superfamily TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SUPERFAMILY SSF47226 1398 1535 3.27E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SUPERFAMILY SSF55874 962 1132 4.45E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 SUPERFAMILY SSF52172 1297 1419 1.05E-35 T 14-10-2018 IPR011006 CheY-like superfamily TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Gene3D G3DSA:3.30.450.20 494 618 3.5E-10 T 14-10-2018 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Gene3D G3DSA:3.40.50.2300 1148 1277 1.9E-17 T 14-10-2018 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1121 1134 6.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1080 1090 6.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1062 1076 6.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1097 1115 6.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0243 5b968ee0be5ce10450f4fc2dffe9afdf 1552 Gene3D G3DSA:3.30.450.20 739 864 9.6E-30 T 14-10-2018 TMO_0119 ef9bfed30a427ef26a6f4f9dde947ac5 428 Gene3D G3DSA:3.40.50.720 199 359 1.6E-191 T 14-10-2018 TMO_0119 ef9bfed30a427ef26a6f4f9dde947ac5 428 SUPERFAMILY SSF50129 43 205 2.04E-31 T 14-10-2018 IPR011032 GroES-like superfamily TMO_0119 ef9bfed30a427ef26a6f4f9dde947ac5 428 Pfam PF00107 Zinc-binding dehydrogenase 223 373 7.1E-35 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_0119 ef9bfed30a427ef26a6f4f9dde947ac5 428 Gene3D G3DSA:3.90.180.10 19 418 1.6E-191 T 14-10-2018 TMO_0119 ef9bfed30a427ef26a6f4f9dde947ac5 428 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 65 177 4.7E-14 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_0119 ef9bfed30a427ef26a6f4f9dde947ac5 428 SMART SM00829 46 410 4.3E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_0119 ef9bfed30a427ef26a6f4f9dde947ac5 428 SUPERFAMILY SSF51735 185 386 1.05E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0119 ef9bfed30a427ef26a6f4f9dde947ac5 428 TIGRFAM TIGR01751 crot-CoA-red: crotonyl-CoA carboxylase/reductase 30 422 7.4E-186 T 14-10-2018 IPR010085 Crotonyl-CoA reductase GO:0043880 KEGG: 00650+1.3.1.86 TMO_c0377 c5afadd4be76e546bf1ebb1b2d7e96f5 434 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 380 391 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_c0377 c5afadd4be76e546bf1ebb1b2d7e96f5 434 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 320 1.7E-50 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TMO_c0377 c5afadd4be76e546bf1ebb1b2d7e96f5 434 Gene3D G3DSA:3.20.20.70 4 309 5.3E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_c0377 c5afadd4be76e546bf1ebb1b2d7e96f5 434 SUPERFAMILY SSF51395 1 321 1.67E-74 T 14-10-2018 TMO_c0377 c5afadd4be76e546bf1ebb1b2d7e96f5 434 Gene3D G3DSA:3.30.70.20 310 414 1.0E-22 T 14-10-2018 TMO_c0377 c5afadd4be76e546bf1ebb1b2d7e96f5 434 Pfam PF14697 4Fe-4S dicluster domain 338 398 1.2E-23 T 14-10-2018 TMO_c0377 c5afadd4be76e546bf1ebb1b2d7e96f5 434 Pfam PF01180 Dihydroorotate dehydrogenase 5 305 4.4E-27 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TMO_c0377 c5afadd4be76e546bf1ebb1b2d7e96f5 434 SUPERFAMILY SSF54862 338 411 7.7E-15 T 14-10-2018 TMO_1053 f0b2656a829f766479d36e63f266d9a5 298 Pfam PF13489 Methyltransferase domain 54 162 8.9E-10 T 14-10-2018 TMO_1053 f0b2656a829f766479d36e63f266d9a5 298 Gene3D G3DSA:3.40.50.150 14 256 6.9E-20 T 14-10-2018 TMO_1053 f0b2656a829f766479d36e63f266d9a5 298 SUPERFAMILY SSF53335 19 217 7.99E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0555 a6ff75541d41bb092bfeb8a688c732a8 324 Pfam PF02780 Transketolase, C-terminal domain 195 313 6.7E-36 T 14-10-2018 IPR033248 Transketolase, C-terminal domain TMO_0555 a6ff75541d41bb092bfeb8a688c732a8 324 Gene3D G3DSA:3.40.50.920 191 322 2.3E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_0555 a6ff75541d41bb092bfeb8a688c732a8 324 Pfam PF02779 Transketolase, pyrimidine binding domain 4 175 9.2E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_0555 a6ff75541d41bb092bfeb8a688c732a8 324 Gene3D G3DSA:3.40.50.970 1 190 1.3E-72 T 14-10-2018 TMO_0555 a6ff75541d41bb092bfeb8a688c732a8 324 SUPERFAMILY SSF52518 3 178 5.4E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_0555 a6ff75541d41bb092bfeb8a688c732a8 324 SUPERFAMILY SSF52922 188 319 6.28E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_0555 a6ff75541d41bb092bfeb8a688c732a8 324 SMART SM00861 4 177 1.2E-55 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_2794 f86b8ab4fb27fb9db28fa5db8a72d694 321 Pfam PF01636 Phosphotransferase enzyme family 28 257 3.4E-34 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase TMO_2794 f86b8ab4fb27fb9db28fa5db8a72d694 321 Gene3D G3DSA:3.30.200.20 1 104 1.2E-35 T 14-10-2018 TMO_2794 f86b8ab4fb27fb9db28fa5db8a72d694 321 SUPERFAMILY SSF56112 5 311 7.66E-80 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_2794 f86b8ab4fb27fb9db28fa5db8a72d694 321 Gene3D G3DSA:3.90.1200.10 107 320 8.5E-76 T 14-10-2018 TMO_2794 f86b8ab4fb27fb9db28fa5db8a72d694 321 Hamap MF_00301 Homoserine kinase [thrB]. 1 321 151.926 T 14-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 TMO_2794 f86b8ab4fb27fb9db28fa5db8a72d694 321 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 308 3.9E-110 T 14-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 TMO_0827 53e7933c8cefc295d3eb3355d778fcf1 379 SMART SM01003 4 139 1.0E-72 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TMO_0827 53e7933c8cefc295d3eb3355d778fcf1 379 Gene3D G3DSA:3.40.50.720 139 322 1.4E-145 T 14-10-2018 TMO_0827 53e7933c8cefc295d3eb3355d778fcf1 379 SMART SM01002 148 315 3.4E-84 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TMO_0827 53e7933c8cefc295d3eb3355d778fcf1 379 Gene3D G3DSA:3.40.50.720 3 368 1.4E-145 T 14-10-2018 TMO_0827 53e7933c8cefc295d3eb3355d778fcf1 379 SUPERFAMILY SSF52283 1 170 9.35E-57 T 14-10-2018 TMO_0827 53e7933c8cefc295d3eb3355d778fcf1 379 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 139 3.4E-48 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TMO_0827 53e7933c8cefc295d3eb3355d778fcf1 379 SUPERFAMILY SSF51735 139 306 1.76E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0827 53e7933c8cefc295d3eb3355d778fcf1 379 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 372 4.5E-71 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 3.0E-130 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 48.227 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 SUPERFAMILY SSF50104 126 272 4.81E-64 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 2.9E-59 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 SUPERFAMILY SSF50249 2 124 1.17E-46 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 Gene3D G3DSA:4.10.950.10 197 274 2.8E-38 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 Gene3D G3DSA:2.30.30.30 118 196 3.2E-33 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 PIRSF PIRSF002158 5 274 9.4E-103 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 SMART SM01383 42 118 4.6E-41 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 SMART SM01382 124 252 4.1E-95 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.9E-30 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 Gene3D G3DSA:2.40.50.140 1 114 2.4E-45 T 14-10-2018 TMO_2629 7a4679f0261c7c5f54076de753295dbc 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_0605 96e9d0f20743a5422faeda6047d4c372 492 SUPERFAMILY SSF53720 9 481 8.9E-154 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_0605 96e9d0f20743a5422faeda6047d4c372 492 Gene3D G3DSA:3.40.309.10 260 448 3.1E-164 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_0605 96e9d0f20743a5422faeda6047d4c372 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_0605 96e9d0f20743a5422faeda6047d4c372 492 Pfam PF00171 Aldehyde dehydrogenase family 21 478 7.0E-158 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_0605 96e9d0f20743a5422faeda6047d4c372 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_0605 96e9d0f20743a5422faeda6047d4c372 492 Gene3D G3DSA:3.40.605.10 15 476 3.1E-164 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_1976 bef0507cfadb7791124a714fd79d5751 184 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 12 133 9.8E-47 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1976 bef0507cfadb7791124a714fd79d5751 184 SUPERFAMILY SSF143243 5 166 4.84E-59 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1976 bef0507cfadb7791124a714fd79d5751 184 Gene3D G3DSA:3.30.460.80 1 113 5.0E-42 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1976 bef0507cfadb7791124a714fd79d5751 184 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 14 134 2.0E-45 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1976 bef0507cfadb7791124a714fd79d5751 184 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 1 141 30.883 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1976 bef0507cfadb7791124a714fd79d5751 184 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 94 115 - T 14-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1976 bef0507cfadb7791124a714fd79d5751 184 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 62 120 3.0E-19 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_c0165 46d278043d692ac462b4b15a90a655cc 560 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 413 432 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_c0165 46d278043d692ac462b4b15a90a655cc 560 Gene3D G3DSA:2.40.110.20 141 299 1.8E-55 T 14-10-2018 TMO_c0165 46d278043d692ac462b4b15a90a655cc 560 Gene3D G3DSA:1.20.140.10 300 455 4.1E-38 T 14-10-2018 TMO_c0165 46d278043d692ac462b4b15a90a655cc 560 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 191 286 3.9E-15 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_c0165 46d278043d692ac462b4b15a90a655cc 560 SUPERFAMILY SSF56645 85 308 3.38E-34 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_c0165 46d278043d692ac462b4b15a90a655cc 560 SUPERFAMILY SSF47203 304 457 3.7E-42 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_c0165 46d278043d692ac462b4b15a90a655cc 560 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 299 454 3.2E-32 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_2691 d2c986c6226eff42c73e2a4d3b5875c1 167 PIRSF PIRSF005900 3 167 2.4E-46 T 14-10-2018 IPR002177 DNA-binding protein Dps TMO_2691 d2c986c6226eff42c73e2a4d3b5875c1 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 46 62 4.4E-7 T 14-10-2018 IPR002177 DNA-binding protein Dps TMO_2691 d2c986c6226eff42c73e2a4d3b5875c1 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 142 160 4.4E-7 T 14-10-2018 IPR002177 DNA-binding protein Dps TMO_2691 d2c986c6226eff42c73e2a4d3b5875c1 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 70 86 4.4E-7 T 14-10-2018 IPR002177 DNA-binding protein Dps TMO_2691 d2c986c6226eff42c73e2a4d3b5875c1 167 Gene3D G3DSA:1.20.1260.10 3 165 3.5E-46 T 14-10-2018 IPR012347 Ferritin-like TMO_2691 d2c986c6226eff42c73e2a4d3b5875c1 167 SUPERFAMILY SSF47240 11 162 8.72E-43 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_2691 d2c986c6226eff42c73e2a4d3b5875c1 167 Pfam PF00210 Ferritin-like domain 26 160 7.2E-24 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 TMO_c0889 64a346b194b151e6a6b53f9e9a2baf8e 177 SMART SM00347 44 145 6.9E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0889 64a346b194b151e6a6b53f9e9a2baf8e 177 Gene3D G3DSA:1.10.10.10 12 160 5.4E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0889 64a346b194b151e6a6b53f9e9a2baf8e 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 5.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0889 64a346b194b151e6a6b53f9e9a2baf8e 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 5.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0889 64a346b194b151e6a6b53f9e9a2baf8e 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 5.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0889 64a346b194b151e6a6b53f9e9a2baf8e 177 Pfam PF12802 MarR family 50 109 7.6E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0889 64a346b194b151e6a6b53f9e9a2baf8e 177 SUPERFAMILY SSF46785 23 158 1.18E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1482 065be3a0b1890650db310ec0dd6e03d7 542 Gene3D G3DSA:3.50.50.60 133 450 1.3E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1482 065be3a0b1890650db310ec0dd6e03d7 542 Gene3D G3DSA:3.90.190.10 1 119 2.8E-37 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like TMO_1482 065be3a0b1890650db310ec0dd6e03d7 542 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 1 114 9.0E-36 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 TMO_1482 065be3a0b1890650db310ec0dd6e03d7 542 Pfam PF04273 Putative phosphatase (DUF442) 1 89 1.1E-27 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 TMO_1482 065be3a0b1890650db310ec0dd6e03d7 542 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 131 253 2.0E-9 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_1482 065be3a0b1890650db310ec0dd6e03d7 542 SUPERFAMILY SSF51905 130 453 6.79E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1482 065be3a0b1890650db310ec0dd6e03d7 542 Gene3D G3DSA:3.50.50.60 245 386 1.3E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0158 14004fd7411112243089194e6ee81b84 176 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 111 120 4.9E-5 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 TMO_b0158 14004fd7411112243089194e6ee81b84 176 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 131 153 4.9E-5 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 TMO_b0158 14004fd7411112243089194e6ee81b84 176 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 75 97 4.9E-5 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 TMO_b0158 14004fd7411112243089194e6ee81b84 176 SUPERFAMILY SSF49329 35 176 7.46E-41 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 TMO_b0158 14004fd7411112243089194e6ee81b84 176 Gene3D G3DSA:2.60.40.200 32 176 5.1E-44 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 TMO_b0158 14004fd7411112243089194e6ee81b84 176 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 164 175 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 TMO_b0158 14004fd7411112243089194e6ee81b84 176 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 41 175 5.0E-37 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 TMO_1494 ab8dbb3b63c65f7c3e035cb2282b4906 308 SUPERFAMILY SSF53850 90 297 2.64E-33 T 14-10-2018 TMO_1494 ab8dbb3b63c65f7c3e035cb2282b4906 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1494 ab8dbb3b63c65f7c3e035cb2282b4906 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1494 ab8dbb3b63c65f7c3e035cb2282b4906 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1494 ab8dbb3b63c65f7c3e035cb2282b4906 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1494 ab8dbb3b63c65f7c3e035cb2282b4906 308 Pfam PF03466 LysR substrate binding domain 96 297 6.5E-21 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1494 ab8dbb3b63c65f7c3e035cb2282b4906 308 Gene3D G3DSA:3.40.190.10 92 292 4.8E-51 T 14-10-2018 TMO_1494 ab8dbb3b63c65f7c3e035cb2282b4906 308 SUPERFAMILY SSF46785 5 85 1.01E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1494 ab8dbb3b63c65f7c3e035cb2282b4906 308 Gene3D G3DSA:1.10.10.10 2 88 2.9E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1494 ab8dbb3b63c65f7c3e035cb2282b4906 308 Gene3D G3DSA:3.40.190.10 172 268 4.8E-51 T 14-10-2018 TMO_1502 35136c61db99252a5bb155b498bde20c 604 Gene3D G3DSA:3.40.50.300 140 327 1.4E-65 T 14-10-2018 TMO_1502 35136c61db99252a5bb155b498bde20c 604 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 601 35.522 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TMO_1502 35136c61db99252a5bb155b498bde20c 604 Gene3D G3DSA:1.20.58.760 407 604 1.4E-70 T 14-10-2018 TMO_1502 35136c61db99252a5bb155b498bde20c 604 Gene3D G3DSA:1.10.8.60 328 404 4.6E-30 T 14-10-2018 TMO_1502 35136c61db99252a5bb155b498bde20c 604 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 TMO_1502 35136c61db99252a5bb155b498bde20c 604 SMART SM00382 188 328 5.2E-24 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1502 35136c61db99252a5bb155b498bde20c 604 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 325 2.5E-42 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_1502 35136c61db99252a5bb155b498bde20c 604 SUPERFAMILY SSF140990 408 602 1.31E-64 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TMO_1502 35136c61db99252a5bb155b498bde20c 604 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 600 2.9E-210 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TMO_1502 35136c61db99252a5bb155b498bde20c 604 Pfam PF06480 FtsH Extracellular 10 95 5.4E-7 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 TMO_1502 35136c61db99252a5bb155b498bde20c 604 SUPERFAMILY SSF52540 147 397 1.04E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1502 35136c61db99252a5bb155b498bde20c 604 Pfam PF01434 Peptidase family M41 386 597 1.9E-70 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TMO_2238 97effef08fd92e6f73063d913158a399 849 Pfam PF00702 haloacid dehalogenase-like hydrolase 511 727 8.5E-47 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 Gene3D G3DSA:3.40.50.1000 495 765 4.4E-94 T 14-10-2018 IPR023214 HAD superfamily TMO_2238 97effef08fd92e6f73063d913158a399 849 SUPERFAMILY SSF56784 512 820 4.95E-64 T 14-10-2018 IPR036412 HAD-like superfamily TMO_2238 97effef08fd92e6f73063d913158a399 849 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 284 791 6.1E-92 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_2238 97effef08fd92e6f73063d913158a399 849 SUPERFAMILY SSF81653 316 412 3.92E-31 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00943 Copper-transporting ATPase signature 435 449 5.7E-9 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00943 Copper-transporting ATPase signature 747 761 5.7E-9 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00943 Copper-transporting ATPase signature 690 707 5.7E-9 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00943 Copper-transporting ATPase signature 302 320 5.7E-9 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00943 Copper-transporting ATPase signature 230 249 5.7E-9 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00943 Copper-transporting ATPase signature 282 301 5.7E-9 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 Pfam PF00122 E1-E2 ATPase 313 493 2.7E-57 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 SUPERFAMILY SSF55008 83 151 1.7E-21 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_2238 97effef08fd92e6f73063d913158a399 849 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 822 6.7E-195 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_2238 97effef08fd92e6f73063d913158a399 849 ProSitePatterns PS01047 Heavy-metal-associated domain. 89 118 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TMO_2238 97effef08fd92e6f73063d913158a399 849 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 20 80 1.9E-10 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 TMO_2238 97effef08fd92e6f73063d913158a399 849 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 86 148 2.4E-11 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 TMO_2238 97effef08fd92e6f73063d913158a399 849 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 227 823 1.7E-184 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 ProSitePatterns PS01047 Heavy-metal-associated domain. 22 51 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 362 376 7.0E-29 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 713 732 7.0E-29 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 638 649 7.0E-29 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 514 528 7.0E-29 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 736 748 7.0E-29 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 670 7.0E-29 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 Gene3D G3DSA:3.30.70.100 81 152 9.4E-22 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 Gene3D G3DSA:2.70.150.20 305 417 9.1E-45 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 Gene3D G3DSA:3.30.70.100 19 80 2.3E-21 T 14-10-2018 TMO_2238 97effef08fd92e6f73063d913158a399 849 SUPERFAMILY SSF81665 260 802 2.35E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TMO_2238 97effef08fd92e6f73063d913158a399 849 Pfam PF00403 Heavy-metal-associated domain 87 147 9.8E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_2238 97effef08fd92e6f73063d913158a399 849 Pfam PF00403 Heavy-metal-associated domain 20 78 2.3E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_2238 97effef08fd92e6f73063d913158a399 849 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 516 522 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TMO_2238 97effef08fd92e6f73063d913158a399 849 Gene3D G3DSA:3.40.1110.10 525 645 4.4E-94 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_2238 97effef08fd92e6f73063d913158a399 849 SUPERFAMILY SSF55008 17 80 1.2E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_1569 1f1ff977c299556abeb5171d8531dd22 137 Gene3D G3DSA:3.30.300.20 44 137 1.9E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_1569 1f1ff977c299556abeb5171d8531dd22 137 Pfam PF02566 OsmC-like protein 38 134 4.0E-19 T 14-10-2018 IPR003718 OsmC/Ohr family TMO_1569 1f1ff977c299556abeb5171d8531dd22 137 SUPERFAMILY SSF82784 1 136 2.09E-44 T 14-10-2018 IPR036102 OsmC/Ohr superfamily TMO_1569 1f1ff977c299556abeb5171d8531dd22 137 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 136 1.4E-56 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 TMO_1569 1f1ff977c299556abeb5171d8531dd22 137 Gene3D G3DSA:2.20.25.10 1 43 2.9E-18 T 14-10-2018 TMO_a0004 3f6dc29482f51a70d4bd05570b2cb6fe 81 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 77 2.7E-32 T 14-10-2018 IPR022789 Antitoxin ParD TMO_a0004 3f6dc29482f51a70d4bd05570b2cb6fe 81 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 72 7.4E-29 T 14-10-2018 IPR022789 Antitoxin ParD TMO_a0004 3f6dc29482f51a70d4bd05570b2cb6fe 81 Gene3D G3DSA:1.10.8.1250 10 80 7.6E-27 T 14-10-2018 IPR038296 Antitoxin ParD superfamily TMO_a0004 3f6dc29482f51a70d4bd05570b2cb6fe 81 SUPERFAMILY SSF47598 3 46 3.22E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_0985 260917a6e72e10cfdb16154cb42d5dfd 317 Pfam PF03631 Virulence factor BrkB 38 292 6.0E-51 T 14-10-2018 IPR017039 Virulence factor BrkB TMO_0985 260917a6e72e10cfdb16154cb42d5dfd 317 PIRSF PIRSF035875 16 312 4.0E-55 T 14-10-2018 IPR017039 Virulence factor BrkB TMO_0985 260917a6e72e10cfdb16154cb42d5dfd 317 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 34 289 3.9E-21 T 14-10-2018 IPR017039 Virulence factor BrkB TMO_3490 f7312948f4ff2d07029c10c099a88e09 350 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 TMO_3490 f7312948f4ff2d07029c10c099a88e09 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 6.6E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TMO_3490 f7312948f4ff2d07029c10c099a88e09 350 Gene3D G3DSA:1.10.260.40 1 55 3.7E-20 T 14-10-2018 TMO_3490 f7312948f4ff2d07029c10c099a88e09 350 SMART SM00354 2 72 3.4E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TMO_3490 f7312948f4ff2d07029c10c099a88e09 350 SUPERFAMILY SSF47413 3 60 9.38E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_3490 f7312948f4ff2d07029c10c099a88e09 350 Gene3D G3DSA:3.40.50.2300 56 308 1.3E-70 T 14-10-2018 TMO_3490 f7312948f4ff2d07029c10c099a88e09 350 Gene3D G3DSA:3.40.50.2300 162 291 1.3E-70 T 14-10-2018 TMO_3490 f7312948f4ff2d07029c10c099a88e09 350 Pfam PF13377 Periplasmic binding protein-like domain 170 317 2.3E-30 T 14-10-2018 TMO_3490 f7312948f4ff2d07029c10c099a88e09 350 SUPERFAMILY SSF53822 59 317 1.47E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_0302 9de85bfb0d3596119070ede3de523aa0 287 SUPERFAMILY SSF54593 4 197 8.17E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_0302 9de85bfb0d3596119070ede3de523aa0 287 Gene3D G3DSA:3.10.180.10 165 287 4.5E-6 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_0302 9de85bfb0d3596119070ede3de523aa0 287 SUPERFAMILY SSF54593 173 286 8.66E-9 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_0302 9de85bfb0d3596119070ede3de523aa0 287 Gene3D G3DSA:3.10.180.10 4 128 1.5E-10 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_0302 9de85bfb0d3596119070ede3de523aa0 287 Pfam PF13468 Glyoxalase-like domain 8 191 5.7E-40 T 14-10-2018 IPR025870 Glyoxalase-like domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.40.50.12780 263 712 1.5E-102 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.10 5690 6056 2.4E-110 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.30 2269 2522 6.9E-99 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.30 886 1131 1.9E-99 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3743 3754 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 889 1131 8.89E-47 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.40.50.12780 5072 5476 5.0E-110 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.40.50.12780 6122 6340 7.3E-46 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.40.50.12780 3592 3998 3.0E-121 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.40.50.12780 1146 1526 1.2E-109 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.40.50.12780 2540 2948 2.9E-134 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.300.30 1527 1616 7.6E-25 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF56801 6132 6337 1.44E-36 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2573 2977 2.6E-129 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1180 1556 1.9E-104 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 5105 5506 2.0E-107 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3623 4028 3.1E-119 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 4819 5061 8.45E-42 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 4628 4806 1.45E-38 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:1.10.1200.10 5576 5651 2.2E-20 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 ProSitePatterns PS00455 Putative AMP-binding domain signature. 6275 6286 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SMART SM00823 Phosphopantetheine attachment site 1630 1698 0.0085 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SMART SM00823 Phosphopantetheine attachment site 3067 3136 8.1E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SMART SM00823 Phosphopantetheine attachment site 4107 4175 0.0027 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SMART SM00823 Phosphopantetheine attachment site 5584 5652 0.0014 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.300.30 2949 3054 5.2E-33 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 4360 4599 2.15E-26 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:1.10.1200.10 1617 1699 1.1E-13 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:1.10.1200.10 4093 4177 3.9E-21 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00550 Phosphopantetheine attachment site 4109 4169 3.1E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00550 Phosphopantetheine attachment site 1633 1693 1.2E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00550 Phosphopantetheine attachment site 3069 3130 6.5E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00550 Phosphopantetheine attachment site 5589 5647 3.9E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.30 3328 3567 1.7E-128 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 5690 5866 1.19E-40 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4131 4146 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1278 1289 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF56801 259 711 2.09E-65 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00668 Condensation domain 724 1133 4.0E-65 T 14-10-2018 IPR001242 Condensation domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00668 Condensation domain 1710 1971 7.6E-21 T 14-10-2018 IPR001242 Condensation domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00668 Condensation domain 2086 2523 9.0E-56 T 14-10-2018 IPR001242 Condensation domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00668 Condensation domain 3152 3577 1.1E-80 T 14-10-2018 IPR001242 Condensation domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00668 Condensation domain 4188 4598 5.2E-45 T 14-10-2018 IPR001242 Condensation domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00668 Condensation domain 5683 6108 1.5E-63 T 14-10-2018 IPR001242 Condensation domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00668 Condensation domain 4630 5063 3.5E-59 T 14-10-2018 IPR001242 Condensation domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.10 726 1075 1.9E-99 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF47336 1624 1692 5.89E-11 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 5868 6108 1.08E-45 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF47336 5577 5646 1.57E-14 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 4187 4372 2.22E-37 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF13193 AMP-binding enzyme C-terminal domain 2962 3037 2.4E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF13193 AMP-binding enzyme C-terminal domain 5490 5560 1.5E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF13193 AMP-binding enzyme C-terminal domain 1540 1606 1.2E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF13193 AMP-binding enzyme C-terminal domain 4012 4082 2.2E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF47336 4100 4169 1.03E-14 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 3154 3324 1.56E-39 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.30 4813 5063 1.4E-101 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.30 1861 2082 1.4E-20 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.30 4344 4600 4.1E-45 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.30 5868 6117 2.4E-110 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 1711 1889 8.15E-27 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.10 3153 3517 1.7E-128 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF08892 YqcI/YcgG family 44 252 1.2E-63 T 14-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00501 AMP-binding enzyme 5086 5482 1.6E-73 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00501 AMP-binding enzyme 6139 6336 1.3E-25 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00501 AMP-binding enzyme 2552 2954 1.0E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00501 AMP-binding enzyme 3604 4004 1.8E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00501 AMP-binding enzyme 1158 1532 2.3E-70 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Pfam PF00501 AMP-binding enzyme 292 712 1.2E-56 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF56801 1133 1621 1.31E-124 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:1.10.1200.10 3058 3141 1.0E-20 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.10 1705 1860 2.9E-31 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.10 4178 4342 2.7E-46 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 2085 2262 2.67E-34 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 2271 2515 9.34E-44 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.10 2091 2456 6.9E-99 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 723 902 1.33E-34 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF47336 3059 3132 1.28E-13 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1654 1669 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 1877 2079 8.89E-13 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.559.10 4636 5005 1.4E-101 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5608 5623 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF56801 3590 4119 1.15E-138 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF52777 3330 3571 1.78E-53 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2690 2701 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.300.30 3999 4092 9.7E-28 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 Gene3D G3DSA:3.30.300.30 5477 5575 1.9E-28 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF56801 2546 3080 1.01E-148 T 14-10-2018 TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 ProSitePatterns PS00455 Putative AMP-binding domain signature. 5224 5235 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0323 e5dd20e3bae54b19ea132d96906d0e23 6469 SUPERFAMILY SSF56801 5074 5597 2.22E-126 T 14-10-2018 TMO_2620 58b8738d6a47d23c18fd972b3a42e120 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.384 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2620 58b8738d6a47d23c18fd972b3a42e120 179 SUPERFAMILY SSF55282 3 178 3.06E-76 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2620 58b8738d6a47d23c18fd972b3a42e120 179 PIRSF PIRSF002161 1 179 2.1E-64 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2620 58b8738d6a47d23c18fd972b3a42e120 179 Pfam PF00673 ribosomal L5P family C-terminus 85 177 5.8E-41 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2620 58b8738d6a47d23c18fd972b3a42e120 179 Gene3D G3DSA:3.30.1440.10 1 179 1.5E-77 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2620 58b8738d6a47d23c18fd972b3a42e120 179 Pfam PF00281 Ribosomal protein L5 24 80 6.7E-26 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2313 109302bbda4949d002159880850af930 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 39.243 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 TMO_2313 109302bbda4949d002159880850af930 608 Gene3D G3DSA:3.40.50.10490 445 593 2.7E-138 T 14-10-2018 TMO_2313 109302bbda4949d002159880850af930 608 Pfam PF13522 Glutamine amidotransferase domain 67 192 9.0E-22 T 14-10-2018 TMO_2313 109302bbda4949d002159880850af930 608 Gene3D G3DSA:3.60.20.10 2 240 3.6E-73 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_2313 109302bbda4949d002159880850af930 608 Pfam PF01380 SIS domain 293 415 9.7E-27 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TMO_2313 109302bbda4949d002159880850af930 608 Pfam PF01380 SIS domain 466 590 8.5E-25 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TMO_2313 109302bbda4949d002159880850af930 608 SUPERFAMILY SSF56235 2 232 1.46E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_2313 109302bbda4949d002159880850af930 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 4.9E-236 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 TMO_2313 109302bbda4949d002159880850af930 608 SUPERFAMILY SSF53697 246 608 1.84E-107 T 14-10-2018 TMO_2313 109302bbda4949d002159880850af930 608 Gene3D G3DSA:3.40.50.10490 247 607 2.7E-138 T 14-10-2018 TMO_a0014 c0d0c2e17ee45afbb848cef279457ef9 150 SUPERFAMILY SSF54909 68 147 7.24E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_a0014 c0d0c2e17ee45afbb848cef279457ef9 150 Gene3D G3DSA:1.10.10.10 1 58 9.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0014 c0d0c2e17ee45afbb848cef279457ef9 150 Gene3D G3DSA:3.30.70.920 59 149 8.2E-16 T 14-10-2018 TMO_a0014 c0d0c2e17ee45afbb848cef279457ef9 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.7E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_a0014 c0d0c2e17ee45afbb848cef279457ef9 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.7E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_a0014 c0d0c2e17ee45afbb848cef279457ef9 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.7E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_a0014 c0d0c2e17ee45afbb848cef279457ef9 150 SUPERFAMILY SSF46785 6 61 9.5E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0014 c0d0c2e17ee45afbb848cef279457ef9 150 Pfam PF01037 Lrp/AsnC ligand binding domain 73 141 9.8E-14 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_a0014 c0d0c2e17ee45afbb848cef279457ef9 150 SMART SM00344 6 112 1.3E-18 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_a0014 c0d0c2e17ee45afbb848cef279457ef9 150 Pfam PF13404 AsnC-type helix-turn-helix domain 6 47 1.6E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_2036 0f28c6f003baff5c09fe200ee5ae3f51 179 SUPERFAMILY SSF50475 17 169 2.26E-40 T 14-10-2018 TMO_2036 0f28c6f003baff5c09fe200ee5ae3f51 179 Pfam PF01613 Flavin reductase like domain 22 169 1.4E-32 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_2036 0f28c6f003baff5c09fe200ee5ae3f51 179 Gene3D G3DSA:2.30.110.10 3 173 8.1E-44 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_2036 0f28c6f003baff5c09fe200ee5ae3f51 179 SMART SM00903 21 168 7.3E-43 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_3336 48a09a36e0354dc9ecec21d0e47af39f 576 Gene3D G3DSA:1.10.3720.10 351 566 3.2E-14 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3336 48a09a36e0354dc9ecec21d0e47af39f 576 SUPERFAMILY SSF161098 19 281 7.09E-17 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3336 48a09a36e0354dc9ecec21d0e47af39f 576 Gene3D G3DSA:1.10.3720.10 18 288 1.0E-15 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3336 48a09a36e0354dc9ecec21d0e47af39f 576 SUPERFAMILY SSF161098 322 564 1.31E-20 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0388 51c6f14acac85a468088a5aa5831ab17 172 Gene3D G3DSA:3.10.129.10 10 162 1.2E-53 T 14-10-2018 TMO_b0388 51c6f14acac85a468088a5aa5831ab17 172 SUPERFAMILY SSF54637 13 164 1.04E-50 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_b0388 51c6f14acac85a468088a5aa5831ab17 172 Pfam PF01575 MaoC like domain 26 138 7.7E-23 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_0261 a70b76abbaf6222022d58ef20be74619 290 SUPERFAMILY SSF53335 22 263 4.75E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0261 a70b76abbaf6222022d58ef20be74619 290 Gene3D G3DSA:3.40.50.150 17 253 3.0E-25 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82693 137 332 8.37E-26 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1046 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:3.30.70.1320 135 334 0.0 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:3.30.70.1430 578 679 0.0 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 Pfam PF00873 AcrB/AcrD/AcrF family 5 1038 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82693 40 134 4.97E-28 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:3.30.70.1430 40 828 0.0 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:1.20.1640.10 10 523 0.0 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.0E-87 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.0E-87 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.0E-87 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.0E-87 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 2.0E-87 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 2.0E-87 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.0E-87 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.0E-87 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 2.0E-87 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82693 576 682 5.75E-26 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82866 842 1038 7.46E-46 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82866 298 498 1.7E-49 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82714 733 818 5.62E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:1.20.1640.10 524 1034 0.0 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:3.30.70.1440 680 877 0.0 T 14-10-2018 TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82714 185 274 4.71E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:3.30.2090.10 181 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:3.30.2090.10 732 820 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_2246 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82693 683 868 3.14E-29 T 14-10-2018 TMO_0610 a2fc198294fefdf0873c82d3f0cc536c 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0610 a2fc198294fefdf0873c82d3f0cc536c 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0610 a2fc198294fefdf0873c82d3f0cc536c 194 SUPERFAMILY SSF48498 82 187 3.95E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_0610 a2fc198294fefdf0873c82d3f0cc536c 194 Gene3D G3DSA:1.10.357.10 52 189 4.1E-34 T 14-10-2018 TMO_0610 a2fc198294fefdf0873c82d3f0cc536c 194 Gene3D G3DSA:1.10.10.60 5 51 4.4E-21 T 14-10-2018 TMO_0610 a2fc198294fefdf0873c82d3f0cc536c 194 SUPERFAMILY SSF46689 3 74 5.13E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0610 a2fc198294fefdf0873c82d3f0cc536c 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 5.0E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 SUPERFAMILY SSF52821 310 440 1.15E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 Gene3D G3DSA:3.40.250.10 208 313 4.7E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 Gene3D G3DSA:3.40.250.10 331 438 3.9E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 SUPERFAMILY SSF52821 209 325 3.27E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 SMART SM00450 335 433 9.1E-8 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 SMART SM00450 211 309 4.5E-12 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 SMART SM00450 470 566 2.8E-15 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 Gene3D G3DSA:2.60.120.10 47 188 1.3E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 SUPERFAMILY SSF51182 12 185 3.56E-36 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 SUPERFAMILY SSF52821 459 563 4.58E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 SUPERFAMILY SSF52821 580 732 1.3E-16 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 Gene3D G3DSA:3.40.250.10 467 555 5.7E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 Pfam PF00581 Rhodanese-like domain 480 560 2.5E-11 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 Pfam PF00581 Rhodanese-like domain 212 305 3.9E-10 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 Pfam PF00581 Rhodanese-like domain 335 429 1.7E-10 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_2273 06cab8707dbcd110b6b1d8a9566ba400 747 Gene3D G3DSA:3.40.250.10 582 684 1.6E-9 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 SMART SM00388 670 737 8.2E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 Gene3D G3DSA:3.30.565.10 746 891 6.5E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 433 453 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 Pfam PF00512 His Kinase A (phospho-acceptor) domain 671 736 2.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 SUPERFAMILY SSF47384 655 736 2.55E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 835 6.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 876 889 6.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 839 849 6.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 853 871 6.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 Pfam PF00474 Sodium:solute symporter family 48 139 1.7E-6 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 783 891 1.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 SMART SM00387 783 892 2.7E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 Gene3D G3DSA:1.20.1730.10 37 485 6.9E-15 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 SUPERFAMILY SSF55874 727 893 2.62E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0932 31f16ac09e43ae4f4fde4f9a238b752f 906 Gene3D G3DSA:1.10.287.130 635 735 1.2E-20 T 14-10-2018 TMO_0189 611e46ce0d0b7451caf3dd791faa7faf 404 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 212 223 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_0189 611e46ce0d0b7451caf3dd791faa7faf 404 Pfam PF08331 Domain of unknown function (DUF1730) 83 159 3.4E-20 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 TMO_0189 611e46ce0d0b7451caf3dd791faa7faf 404 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 27 334 43.048 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 TMO_0189 611e46ce0d0b7451caf3dd791faa7faf 404 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 34 366 5.0E-124 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 TMO_0189 611e46ce0d0b7451caf3dd791faa7faf 404 Pfam PF13484 4Fe-4S double cluster binding domain 211 275 1.4E-18 T 14-10-2018 TMO_0189 611e46ce0d0b7451caf3dd791faa7faf 404 SUPERFAMILY SSF48371 323 370 2.42E-5 T 14-10-2018 IPR016024 Armadillo-type fold TMO_0189 611e46ce0d0b7451caf3dd791faa7faf 404 SUPERFAMILY SSF46548 158 275 3.5E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_1763 3b67a856d05fd9922f471eb7cfbb6a02 282 SUPERFAMILY SSF46785 2 68 2.46E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1763 3b67a856d05fd9922f471eb7cfbb6a02 282 Pfam PF00717 Peptidase S24-like 197 261 1.4E-13 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TMO_1763 3b67a856d05fd9922f471eb7cfbb6a02 282 TIGRFAM TIGR00498 lexA: repressor LexA 153 280 4.2E-36 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 TMO_1763 3b67a856d05fd9922f471eb7cfbb6a02 282 Gene3D G3DSA:1.10.10.10 1 68 4.2E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1763 3b67a856d05fd9922f471eb7cfbb6a02 282 Hamap MF_00015 LexA repressor [lexA]. 1 281 31.556 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 TMO_1763 3b67a856d05fd9922f471eb7cfbb6a02 282 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 194 204 1.2E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TMO_1763 3b67a856d05fd9922f471eb7cfbb6a02 282 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 234 246 1.2E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TMO_1763 3b67a856d05fd9922f471eb7cfbb6a02 282 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 205 216 1.2E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TMO_1763 3b67a856d05fd9922f471eb7cfbb6a02 282 Gene3D G3DSA:2.10.109.10 162 281 8.6E-40 T 14-10-2018 TMO_1763 3b67a856d05fd9922f471eb7cfbb6a02 282 Pfam PF01726 LexA DNA binding domain 2 63 2.4E-13 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 TMO_1763 3b67a856d05fd9922f471eb7cfbb6a02 282 SUPERFAMILY SSF51306 156 279 1.24E-31 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TMO_3325 20e115eeb645e78621ea33954f252b57 917 SMART SM00881 9 104 1.8E-34 T 14-10-2018 IPR003781 CoA-binding GO:0048037 TMO_3325 20e115eeb645e78621ea33954f252b57 917 SUPERFAMILY SSF52210 136 295 1.44E-45 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3325 20e115eeb645e78621ea33954f252b57 917 Gene3D G3DSA:3.40.630.30 726 914 8.2E-44 T 14-10-2018 TMO_3325 20e115eeb645e78621ea33954f252b57 917 SUPERFAMILY SSF55729 731 895 1.54E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_3325 20e115eeb645e78621ea33954f252b57 917 Pfam PF13380 CoA binding domain 13 139 3.8E-26 T 14-10-2018 IPR003781 CoA-binding GO:0048037 TMO_3325 20e115eeb645e78621ea33954f252b57 917 SUPERFAMILY SSF51735 2 144 3.19E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3325 20e115eeb645e78621ea33954f252b57 917 Gene3D G3DSA:3.30.470.20 491 702 5.4E-72 T 14-10-2018 TMO_3325 20e115eeb645e78621ea33954f252b57 917 SUPERFAMILY SSF52210 299 456 1.31E-43 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3325 20e115eeb645e78621ea33954f252b57 917 Gene3D G3DSA:3.40.50.261 298 465 3.6E-52 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3325 20e115eeb645e78621ea33954f252b57 917 Pfam PF13549 ATP-grasp domain 483 704 3.1E-78 T 14-10-2018 TMO_3325 20e115eeb645e78621ea33954f252b57 917 Gene3D G3DSA:3.40.50.261 135 295 2.9E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3325 20e115eeb645e78621ea33954f252b57 917 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 156 293 6.7E-53 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain TMO_3325 20e115eeb645e78621ea33954f252b57 917 Gene3D G3DSA:3.30.1490.20 509 586 5.4E-72 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_3325 20e115eeb645e78621ea33954f252b57 917 SUPERFAMILY SSF56059 492 701 7.9E-39 T 14-10-2018 TMO_3325 20e115eeb645e78621ea33954f252b57 917 Pfam PF00583 Acetyltransferase (GNAT) family 812 887 5.8E-8 T 14-10-2018 IPR000182 GNAT domain TMO_3325 20e115eeb645e78621ea33954f252b57 917 Gene3D G3DSA:3.40.50.720 3 134 3.3E-41 T 14-10-2018 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 Gene3D G3DSA:3.40.50.300 70 290 1.0E-39 T 14-10-2018 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 SMART SM00382 89 246 1.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 44.065 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 431 1.7E-9 T 14-10-2018 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 SUPERFAMILY SSF52540 69 293 2.31E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 SUPERFAMILY SSF54211 257 456 1.21E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 Gene3D G3DSA:3.30.230.10 338 456 2.4E-15 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 215 243 3.5E-87 T 14-10-2018 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 10 34 3.5E-87 T 14-10-2018 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 81 109 3.5E-87 T 14-10-2018 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 176 200 3.5E-87 T 14-10-2018 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 123 140 3.5E-87 T 14-10-2018 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 324 347 3.5E-87 T 14-10-2018 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 250 276 3.5E-87 T 14-10-2018 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 Pfam PF13481 AAA domain 83 224 2.3E-12 T 14-10-2018 TMO_1877 84cd676c7c53578bed8d31c9b9de0f17 490 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 441 4.8E-173 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TMO_1653 7ce4ae8655c79ad4b17b318233aeb711 244 Pfam PF00119 ATP synthase A chain 23 213 2.3E-45 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1653 7ce4ae8655c79ad4b17b318233aeb711 244 PRINTS PR00123 ATP synthase A subunit signature 156 178 4.7E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1653 7ce4ae8655c79ad4b17b318233aeb711 244 PRINTS PR00123 ATP synthase A subunit signature 140 155 4.7E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1653 7ce4ae8655c79ad4b17b318233aeb711 244 PRINTS PR00123 ATP synthase A subunit signature 200 215 4.7E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1653 7ce4ae8655c79ad4b17b318233aeb711 244 PRINTS PR00123 ATP synthase A subunit signature 80 96 4.7E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1653 7ce4ae8655c79ad4b17b318233aeb711 244 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 24 215 4.3E-31 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1653 7ce4ae8655c79ad4b17b318233aeb711 244 Hamap MF_01393 ATP synthase subunit a [atpB]. 10 220 13.356 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1653 7ce4ae8655c79ad4b17b318233aeb711 244 Gene3D G3DSA:1.20.120.220 73 219 1.2E-32 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1653 7ce4ae8655c79ad4b17b318233aeb711 244 SUPERFAMILY SSF81336 77 213 2.09E-33 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_0118 548f5ccf9761463acc8f38de238c41b9 676 Gene3D G3DSA:3.40.50.280 526 676 1.3E-47 T 14-10-2018 TMO_0118 548f5ccf9761463acc8f38de238c41b9 676 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 541 668 4.5E-36 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TMO_0118 548f5ccf9761463acc8f38de238c41b9 676 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 19 509 2.7E-142 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TMO_0118 548f5ccf9761463acc8f38de238c41b9 676 SUPERFAMILY SSF52242 513 669 3.79E-47 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TMO_0118 548f5ccf9761463acc8f38de238c41b9 676 Pfam PF02310 B12 binding domain 544 646 3.2E-15 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TMO_0118 548f5ccf9761463acc8f38de238c41b9 676 SUPERFAMILY SSF51703 17 505 8.24E-159 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TMO_0118 548f5ccf9761463acc8f38de238c41b9 676 Pfam PF01642 Methylmalonyl-CoA mutase 18 503 2.9E-130 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TMO_0118 548f5ccf9761463acc8f38de238c41b9 676 Gene3D G3DSA:3.20.20.240 11 520 1.9E-167 T 14-10-2018 TMO_1543 2d42ac0a4ff69d69f69de3edfb0c9773 421 Gene3D G3DSA:3.40.47.10 269 421 1.8E-54 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1543 2d42ac0a4ff69d69f69de3edfb0c9773 421 SUPERFAMILY SSF53901 1 260 1.23E-72 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1543 2d42ac0a4ff69d69f69de3edfb0c9773 421 PIRSF PIRSF000447 1 421 5.6E-157 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TMO_1543 2d42ac0a4ff69d69f69de3edfb0c9773 421 SUPERFAMILY SSF53901 223 420 4.74E-64 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1543 2d42ac0a4ff69d69f69de3edfb0c9773 421 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 417 2.5E-161 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TMO_1543 2d42ac0a4ff69d69f69de3edfb0c9773 421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 162 178 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site TMO_1543 2d42ac0a4ff69d69f69de3edfb0c9773 421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 255 5.9E-60 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TMO_1543 2d42ac0a4ff69d69f69de3edfb0c9773 421 SMART SM00825 Beta-ketoacyl synthase 4 421 1.4E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TMO_1543 2d42ac0a4ff69d69f69de3edfb0c9773 421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 264 376 4.1E-37 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TMO_1543 2d42ac0a4ff69d69f69de3edfb0c9773 421 Gene3D G3DSA:3.40.47.10 1 262 1.3E-83 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0806 0642bcb5a500c532999183a745c96e77 594 Pfam PF00501 AMP-binding enzyme 15 468 2.6E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0806 0642bcb5a500c532999183a745c96e77 594 Gene3D G3DSA:3.40.50.12780 2 461 5.5E-151 T 14-10-2018 TMO_c0806 0642bcb5a500c532999183a745c96e77 594 SUPERFAMILY SSF56801 5 574 8.63E-115 T 14-10-2018 TMO_c0806 0642bcb5a500c532999183a745c96e77 594 Gene3D G3DSA:3.30.300.30 462 590 3.8E-32 T 14-10-2018 TMO_c0806 0642bcb5a500c532999183a745c96e77 594 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_2711 bf551d8a0c0e5aa02d1cfbe2579d6f46 221 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 26 210 3.8E-68 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 TMO_2711 bf551d8a0c0e5aa02d1cfbe2579d6f46 221 Gene3D G3DSA:3.40.50.300 17 220 4.9E-55 T 14-10-2018 TMO_2711 bf551d8a0c0e5aa02d1cfbe2579d6f46 221 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 30 214 26.921 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 TMO_2711 bf551d8a0c0e5aa02d1cfbe2579d6f46 221 SUPERFAMILY SSF52540 37 216 1.56E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2711 bf551d8a0c0e5aa02d1cfbe2579d6f46 221 Pfam PF01926 50S ribosome-binding GTPase 44 162 2.0E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_0948 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 Pfam PF07690 Major Facilitator Superfamily 31 369 9.7E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0948 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 SUPERFAMILY SSF103473 10 486 1.31E-33 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0948 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 Gene3D G3DSA:1.20.1250.20 291 486 1.7E-6 T 14-10-2018 TMO_0948 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 Gene3D G3DSA:1.20.1720.10 28 266 4.7E-17 T 14-10-2018 TMO_0948 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 PRINTS PR01035 Tetracycline resistance protein signature 351 374 6.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_0948 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 PRINTS PR01035 Tetracycline resistance protein signature 62 81 6.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_0948 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 PRINTS PR01035 Tetracycline resistance protein signature 151 173 6.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00397 Sirohaem Fe-binding site signature 689 707 3.1E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00397 Sirohaem Fe-binding site signature 646 664 3.1E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 Gene3D G3DSA:3.90.480.10 551 646 1.6E-6 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 283 7.1E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 643 776 5.8E-28 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 Gene3D G3DSA:3.50.50.60 117 243 2.0E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 Gene3D G3DSA:3.50.50.60 8 292 2.0E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 SUPERFAMILY SSF51905 149 310 3.96E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 SUPERFAMILY SSF56014 644 806 7.59E-51 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 SUPERFAMILY SSF51905 7 195 2.21E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.2E-9 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 237 251 2.2E-9 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.2E-9 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 2.2E-9 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 Gene3D G3DSA:1.10.10.1100 427 479 4.8E-8 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 689 705 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 Pfam PF04324 BFD-like [2Fe-2S] binding domain 494 543 1.2E-7 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 Pfam PF04324 BFD-like [2Fe-2S] binding domain 428 475 1.2E-12 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PIRSF PIRSF037149 1 818 1.0E-286 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 SUPERFAMILY SSF55124 529 651 3.76E-25 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.6E-19 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.6E-19 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.6E-19 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.6E-19 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.6E-19 T 14-10-2018 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 569 633 1.8E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 8 806 1.1E-251 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 Gene3D G3DSA:3.30.390.30 319 387 2.3E-6 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_2148 6dccb21cddb21b2dc87548db14e1a0b8 825 Gene3D G3DSA:3.30.413.10 647 797 3.1E-35 T 14-10-2018 TMO_0253 906db06f7a2482f60787f82850a35f36 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0253 906db06f7a2482f60787f82850a35f36 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0253 906db06f7a2482f60787f82850a35f36 223 Pfam PF13972 Bacterial transcriptional repressor 65 205 2.3E-39 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR TMO_0253 906db06f7a2482f60787f82850a35f36 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 8.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0253 906db06f7a2482f60787f82850a35f36 223 Gene3D G3DSA:1.10.357.10 6 222 1.4E-57 T 14-10-2018 TMO_0253 906db06f7a2482f60787f82850a35f36 223 SUPERFAMILY SSF46689 3 79 4.1E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0292 8b38d09981cb642cf2715edc8dc7654c 402 Gene3D G3DSA:1.10.10.10 333 380 4.3E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0292 8b38d09981cb642cf2715edc8dc7654c 402 SUPERFAMILY SSF46785 332 385 2.61E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2524 b138f0cb1f55c20b442f92f0e24809bc 301 SUPERFAMILY SSF46785 2 113 1.42E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2524 b138f0cb1f55c20b442f92f0e24809bc 301 Pfam PF03466 LysR substrate binding domain 91 295 9.4E-37 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2524 b138f0cb1f55c20b442f92f0e24809bc 301 Gene3D G3DSA:1.10.10.10 4 88 2.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2524 b138f0cb1f55c20b442f92f0e24809bc 301 Gene3D G3DSA:3.40.190.10 93 289 8.3E-45 T 14-10-2018 TMO_2524 b138f0cb1f55c20b442f92f0e24809bc 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.8E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2524 b138f0cb1f55c20b442f92f0e24809bc 301 SUPERFAMILY SSF53850 91 296 6.36E-33 T 14-10-2018 TMO_2524 b138f0cb1f55c20b442f92f0e24809bc 301 Gene3D G3DSA:3.40.190.10 168 270 8.3E-45 T 14-10-2018 TMO_c0211 e086b996f0fbc642ce6eec2b83cde889 318 SUPERFAMILY SSF48179 189 297 2.04E-17 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_c0211 e086b996f0fbc642ce6eec2b83cde889 318 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 185 1.5E-45 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_c0211 e086b996f0fbc642ce6eec2b83cde889 318 PIRSF PIRSF000105 1 316 4.6E-72 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 TMO_c0211 e086b996f0fbc642ce6eec2b83cde889 318 Gene3D G3DSA:1.10.1040.10 191 310 4.9E-21 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_c0211 e086b996f0fbc642ce6eec2b83cde889 318 SUPERFAMILY SSF51735 1 186 1.43E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0211 e086b996f0fbc642ce6eec2b83cde889 318 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 288 1.0E-14 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_c0211 e086b996f0fbc642ce6eec2b83cde889 318 Gene3D G3DSA:3.40.50.720 1 190 2.6E-55 T 14-10-2018 TMO_3194 e8dfbc1276e9a5bef32e0649e36f21ef 214 SMART SM00530 32 87 2.2E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_3194 e8dfbc1276e9a5bef32e0649e36f21ef 214 SUPERFAMILY SSF51182 80 203 8.02E-26 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_3194 e8dfbc1276e9a5bef32e0649e36f21ef 214 Pfam PF07883 Cupin domain 133 202 3.4E-13 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_3194 e8dfbc1276e9a5bef32e0649e36f21ef 214 SUPERFAMILY SSF47413 27 92 1.56E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_3194 e8dfbc1276e9a5bef32e0649e36f21ef 214 Gene3D G3DSA:2.60.120.10 115 207 2.7E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_3194 e8dfbc1276e9a5bef32e0649e36f21ef 214 Pfam PF01381 Helix-turn-helix 33 85 5.9E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_3194 e8dfbc1276e9a5bef32e0649e36f21ef 214 Gene3D G3DSA:1.10.260.40 21 95 1.1E-21 T 14-10-2018 TMO_1696 9777e7666622c95caa89369c8579aa2d 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 4.6E-265 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TMO_1696 9777e7666622c95caa89369c8579aa2d 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 8.9E-102 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 TMO_1696 9777e7666622c95caa89369c8579aa2d 548 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TMO_1696 9777e7666622c95caa89369c8579aa2d 548 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TMO_1696 9777e7666622c95caa89369c8579aa2d 548 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TMO_1696 9777e7666622c95caa89369c8579aa2d 548 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TMO_1696 9777e7666622c95caa89369c8579aa2d 548 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TMO_1696 9777e7666622c95caa89369c8579aa2d 548 SUPERFAMILY SSF54849 137 206 3.66E-24 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TMO_1696 9777e7666622c95caa89369c8579aa2d 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 42.865 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TMO_1696 9777e7666622c95caa89369c8579aa2d 548 SUPERFAMILY SSF52029 185 376 7.33E-87 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily TMO_1696 9777e7666622c95caa89369c8579aa2d 548 SUPERFAMILY SSF48592 6 522 3.66E-78 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily TMO_1696 9777e7666622c95caa89369c8579aa2d 548 Gene3D G3DSA:3.50.7.10 173 379 5.3E-242 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily TMO_1696 9777e7666622c95caa89369c8579aa2d 548 Gene3D G3DSA:3.30.260.10 138 410 5.3E-242 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TMO_1696 9777e7666622c95caa89369c8579aa2d 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TMO_1696 9777e7666622c95caa89369c8579aa2d 548 Gene3D G3DSA:1.10.560.10 8 522 5.3E-242 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily TMO_b0571 2d122d72acaeaf5c9b05526b77da3d77 257 Pfam PF02515 CoA-transferase family III 1 249 2.0E-55 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_b0571 2d122d72acaeaf5c9b05526b77da3d77 257 Gene3D G3DSA:3.40.50.10540 1 223 1.2E-62 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_b0571 2d122d72acaeaf5c9b05526b77da3d77 257 Gene3D G3DSA:3.30.1540.10 115 204 1.2E-62 T 14-10-2018 TMO_b0571 2d122d72acaeaf5c9b05526b77da3d77 257 SUPERFAMILY SSF89796 1 250 2.62E-61 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_2864 51b4e85566d7a3486599580992646a78 218 SUPERFAMILY SSF161098 11 198 1.23E-44 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2864 51b4e85566d7a3486599580992646a78 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 212 7.5E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2864 51b4e85566d7a3486599580992646a78 218 Gene3D G3DSA:1.10.3720.10 1 214 1.1E-51 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2864 51b4e85566d7a3486599580992646a78 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 2.0E-30 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_1618 8b6c104ac5d50fbca168862edeea4809 151 SMART SM00347 28 127 2.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1618 8b6c104ac5d50fbca168862edeea4809 151 Gene3D G3DSA:1.10.10.10 2 142 2.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1618 8b6c104ac5d50fbca168862edeea4809 151 Pfam PF13463 Winged helix DNA-binding domain 36 100 2.0E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1618 8b6c104ac5d50fbca168862edeea4809 151 SUPERFAMILY SSF46785 5 143 7.8E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1618 8b6c104ac5d50fbca168862edeea4809 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_b0103 353ac8b6c754772e2f454636bc40de88 363 SUPERFAMILY SSF50331 235 352 1.47E-22 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_b0103 353ac8b6c754772e2f454636bc40de88 363 Pfam PF08402 TOBE domain 274 345 1.1E-4 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_b0103 353ac8b6c754772e2f454636bc40de88 363 Gene3D G3DSA:3.40.50.300 1 235 7.6E-57 T 14-10-2018 TMO_b0103 353ac8b6c754772e2f454636bc40de88 363 Gene3D G3DSA:2.40.50.100 251 353 9.2E-7 T 14-10-2018 TMO_b0103 353ac8b6c754772e2f454636bc40de88 363 Gene3D G3DSA:2.40.50.140 280 337 9.2E-7 T 14-10-2018 TMO_b0103 353ac8b6c754772e2f454636bc40de88 363 Pfam PF00005 ABC transporter 20 159 3.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0103 353ac8b6c754772e2f454636bc40de88 363 SMART SM00382 26 218 1.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0103 353ac8b6c754772e2f454636bc40de88 363 SUPERFAMILY SSF52540 1 240 5.6E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3241 d4f53800b4a9c02dfd68a3385101a3b6 107 PIRSF PIRSF000077 1 106 9.3E-44 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TMO_3241 d4f53800b4a9c02dfd68a3385101a3b6 107 SUPERFAMILY SSF52833 3 106 8.42E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_3241 d4f53800b4a9c02dfd68a3385101a3b6 107 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 105 4.5E-39 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TMO_3241 d4f53800b4a9c02dfd68a3385101a3b6 107 Pfam PF00085 Thioredoxin 3 103 4.1E-35 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 TMO_3241 d4f53800b4a9c02dfd68a3385101a3b6 107 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TMO_3241 d4f53800b4a9c02dfd68a3385101a3b6 107 Gene3D G3DSA:3.40.30.10 1 106 7.1E-36 T 14-10-2018 TMO_3241 d4f53800b4a9c02dfd68a3385101a3b6 107 PRINTS PR00421 Thioredoxin family signature 30 39 1.1E-9 T 14-10-2018 TMO_3241 d4f53800b4a9c02dfd68a3385101a3b6 107 PRINTS PR00421 Thioredoxin family signature 22 30 1.1E-9 T 14-10-2018 TMO_3241 d4f53800b4a9c02dfd68a3385101a3b6 107 PRINTS PR00421 Thioredoxin family signature 70 81 1.1E-9 T 14-10-2018 TMO_0565 6274b6110c5b1310dc68a8f90bca5677 150 Gene3D G3DSA:2.40.50.90 19 140 1.2E-24 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily TMO_0565 6274b6110c5b1310dc68a8f90bca5677 150 SUPERFAMILY SSF50199 20 140 3.79E-32 T 14-10-2018 TMO_0565 6274b6110c5b1310dc68a8f90bca5677 150 Pfam PF00565 Staphylococcal nuclease homologue 33 135 3.2E-14 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 TMO_0565 6274b6110c5b1310dc68a8f90bca5677 150 SMART SM00318 13 136 8.2E-14 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 TMO_0436 c5293b65ce2d3ae7db1be812bec262ad 270 SUPERFAMILY SSF161098 9 259 4.71E-53 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0436 c5293b65ce2d3ae7db1be812bec262ad 270 Gene3D G3DSA:1.10.3720.10 12 265 2.5E-48 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0436 c5293b65ce2d3ae7db1be812bec262ad 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 259 2.1E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0331 2cfaf1a84d71bdcde89d4e02e2499579 419 SUPERFAMILY SSF51556 70 373 4.74E-88 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_0331 2cfaf1a84d71bdcde89d4e02e2499579 419 SUPERFAMILY SSF51338 8 417 3.28E-20 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_0331 2cfaf1a84d71bdcde89d4e02e2499579 419 Gene3D G3DSA:2.30.40.10 18 414 1.7E-139 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_0331 2cfaf1a84d71bdcde89d4e02e2499579 419 Gene3D G3DSA:3.20.20.140 71 371 1.7E-139 T 14-10-2018 TMO_0331 2cfaf1a84d71bdcde89d4e02e2499579 419 Pfam PF01979 Amidohydrolase family 66 415 1.6E-41 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_1541 7a10f07495c3bac1a88523531dfab68e 221 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 207 7.9E-61 T 14-10-2018 TMO_1541 7a10f07495c3bac1a88523531dfab68e 221 Gene3D G3DSA:3.40.50.150 1 212 2.8E-74 T 14-10-2018 TMO_1541 7a10f07495c3bac1a88523531dfab68e 221 SUPERFAMILY SSF53335 14 210 8.02E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1541 7a10f07495c3bac1a88523531dfab68e 221 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 212 36.934 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TMO_1541 7a10f07495c3bac1a88523531dfab68e 221 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TMO_1541 7a10f07495c3bac1a88523531dfab68e 221 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 209 3.2E-64 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 SUPERFAMILY SSF52490 15 211 6.15E-72 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 SMART SM00865 210 328 4.6E-61 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 Pfam PF12327 FtsZ family, C-terminal domain 225 320 1.4E-39 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 14 339 1.4E-127 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 177 2.5E-43 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 338 38.7 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 Gene3D G3DSA:3.40.50.1440 13 320 2.1E-124 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 PRINTS PR00423 Cell division protein FtsZ signature 215 236 3.7E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 PRINTS PR00423 Cell division protein FtsZ signature 101 121 3.7E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 PRINTS PR00423 Cell division protein FtsZ signature 129 150 3.7E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 PRINTS PR00423 Cell division protein FtsZ signature 192 214 3.7E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 SUPERFAMILY SSF55307 207 322 5.04E-45 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 TMO_c0235 32a8699423142abc7beb0dfbd93d37e9 521 SMART SM00864 16 208 1.4E-112 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TMO_1590 0c75d8ca5c63caceb93949d7aa586fdc 133 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 56 3.6E-16 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_1590 0c75d8ca5c63caceb93949d7aa586fdc 133 SUPERFAMILY SSF63562 1 80 2.09E-20 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TMO_1590 0c75d8ca5c63caceb93949d7aa586fdc 133 Gene3D G3DSA:3.90.940.10 1 83 4.0E-22 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TMO_1590 0c75d8ca5c63caceb93949d7aa586fdc 133 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.478 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_1590 0c75d8ca5c63caceb93949d7aa586fdc 133 SMART SM01409 8 60 6.8E-13 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TMO_1590 0c75d8ca5c63caceb93949d7aa586fdc 133 Pfam PF01192 RNA polymerase Rpb6 8 59 9.8E-12 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TMO_2534 737279b43bd3d02ddee5e987acbec147 354 SMART SM00382 46 229 2.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2534 737279b43bd3d02ddee5e987acbec147 354 Gene3D G3DSA:3.40.50.300 20 281 1.9E-73 T 14-10-2018 TMO_2534 737279b43bd3d02ddee5e987acbec147 354 Pfam PF00005 ABC transporter 38 179 2.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2534 737279b43bd3d02ddee5e987acbec147 354 SUPERFAMILY SSF50331 253 348 9.64E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_2534 737279b43bd3d02ddee5e987acbec147 354 Pfam PF08402 TOBE domain 274 348 3.0E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_2534 737279b43bd3d02ddee5e987acbec147 354 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2534 737279b43bd3d02ddee5e987acbec147 354 SUPERFAMILY SSF52540 22 258 1.0E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3429 62ed43bc8d06b4979fdaec6940b049ef 228 PIRSF PIRSF004848 1 225 2.4E-60 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TMO_3429 62ed43bc8d06b4979fdaec6940b049ef 228 SUPERFAMILY SSF51419 1 218 4.45E-71 T 14-10-2018 IPR029066 PLP-binding barrel TMO_3429 62ed43bc8d06b4979fdaec6940b049ef 228 Pfam PF01168 Alanine racemase, N-terminal domain 7 220 1.5E-23 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_3429 62ed43bc8d06b4979fdaec6940b049ef 228 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 220 1.2E-50 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TMO_3429 62ed43bc8d06b4979fdaec6940b049ef 228 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 219 25.711 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TMO_3429 62ed43bc8d06b4979fdaec6940b049ef 228 Gene3D G3DSA:3.20.20.10 1 224 7.4E-77 T 14-10-2018 IPR029066 PLP-binding barrel TMO_2344 dfa60d3754e510481ba77c3f88a1df4b 477 Gene3D G3DSA:1.10.45.10 434 474 2.6E-11 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 TMO_2344 dfa60d3754e510481ba77c3f88a1df4b 477 Pfam PF01565 FAD binding domain 49 185 1.8E-35 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TMO_2344 dfa60d3754e510481ba77c3f88a1df4b 477 Gene3D G3DSA:3.30.70.2190 225 346 5.9E-33 T 14-10-2018 TMO_2344 dfa60d3754e510481ba77c3f88a1df4b 477 Gene3D G3DSA:3.30.43.10 3 101 9.0E-25 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 TMO_2344 dfa60d3754e510481ba77c3f88a1df4b 477 SUPERFAMILY SSF56176 11 225 1.59E-71 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_2344 dfa60d3754e510481ba77c3f88a1df4b 477 Pfam PF02913 FAD linked oxidases, C-terminal domain 225 473 1.2E-52 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TMO_2344 dfa60d3754e510481ba77c3f88a1df4b 477 Gene3D G3DSA:3.30.70.2740 347 433 2.0E-30 T 14-10-2018 TMO_2344 dfa60d3754e510481ba77c3f88a1df4b 477 SUPERFAMILY SSF55103 228 475 2.45E-59 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TMO_2344 dfa60d3754e510481ba77c3f88a1df4b 477 Gene3D G3DSA:3.30.465.10 103 224 3.5E-43 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 SUPERFAMILY SSF52943 3 297 6.28E-88 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 283 296 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 Gene3D G3DSA:3.40.1380.10 63 216 2.3E-92 T 14-10-2018 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 Gene3D G3DSA:1.10.287.80 7 293 2.3E-92 T 14-10-2018 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 PRINTS PR00126 ATP synthase gamma subunit signature 275 296 1.0E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 PRINTS PR00126 ATP synthase gamma subunit signature 244 263 1.0E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 1.0E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 1.0E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 297 7.6E-102 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 297 33.197 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 Pfam PF00231 ATP synthase 3 297 2.4E-94 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2986 34669e9a3b38de6e37375fd43116d3ee 297 PIRSF PIRSF039089 1 297 2.5E-105 T 14-10-2018 TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00145 Argininosuccinate lyase family signature 321 337 2.7E-6 T 14-10-2018 TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 2.7E-6 T 14-10-2018 TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00145 Argininosuccinate lyase family signature 179 199 2.7E-6 T 14-10-2018 TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 SUPERFAMILY SSF48557 8 466 1.07E-160 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 9 465 6.5E-232 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 Pfam PF10415 Fumarase C C-terminus 412 465 5.1E-25 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 Pfam PF00206 Lyase 16 346 9.4E-114 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 Gene3D G3DSA:1.10.275.10 9 142 4.6E-59 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 Gene3D G3DSA:1.20.200.10 143 411 2.6E-120 T 14-10-2018 TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 Gene3D G3DSA:1.10.40.30 412 467 6.8E-28 T 14-10-2018 TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 Hamap MF_00743 Fumarate hydratase class II [fumC]. 8 466 91.737 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 ProSitePatterns PS00163 Fumarate lyases signature. 321 330 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 2.8E-35 T 14-10-2018 IPR000362 Fumarate lyase family TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00149 Fumarate lyase superfamily signature 321 337 2.8E-35 T 14-10-2018 IPR000362 Fumarate lyase family TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00149 Fumarate lyase superfamily signature 275 302 2.8E-35 T 14-10-2018 IPR000362 Fumarate lyase family TMO_0081 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 2.8E-35 T 14-10-2018 IPR000362 Fumarate lyase family TMO_1302 a7e5ecc1c07de498e18b5e0c4fee59dd 773 Pfam PF00593 TonB dependent receptor 320 771 2.3E-58 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_1302 a7e5ecc1c07de498e18b5e0c4fee59dd 773 Gene3D G3DSA:2.40.170.20 272 773 1.4E-130 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_1302 a7e5ecc1c07de498e18b5e0c4fee59dd 773 SUPERFAMILY SSF56935 140 773 4.71E-115 T 14-10-2018 TMO_1302 a7e5ecc1c07de498e18b5e0c4fee59dd 773 Gene3D G3DSA:2.170.130.10 143 266 2.7E-37 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_1302 a7e5ecc1c07de498e18b5e0c4fee59dd 773 SMART SM00965 75 126 1.4E-5 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_1302 a7e5ecc1c07de498e18b5e0c4fee59dd 773 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 756 773 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site TMO_1302 a7e5ecc1c07de498e18b5e0c4fee59dd 773 Pfam PF07715 TonB-dependent Receptor Plug Domain 152 261 3.2E-25 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_1302 a7e5ecc1c07de498e18b5e0c4fee59dd 773 Gene3D G3DSA:3.55.50.30 41 142 1.4E-20 T 14-10-2018 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 616 637 2.0E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 849 870 2.0E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 663 814 3.79E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 752 770 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 56 74 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 603 621 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 761 779 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1316 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR00313 NodO calcium binding signature 39 50 1.2E-9 T 14-10-2018 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR00313 NodO calcium binding signature 117 125 1.2E-9 T 14-10-2018 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR00313 NodO calcium binding signature 60 68 1.2E-9 T 14-10-2018 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR00313 NodO calcium binding signature 210 219 1.2E-9 T 14-10-2018 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 780 976 3.0E-31 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 9 173 1.57E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF08548 Peptidase M10 serralysin C terminal 817 963 3.0E-6 T 14-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 554 639 6.7E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 294 389 5.8E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 47 65 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1316 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 403 497 1.57E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 371 384 1.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 5 21 0.11 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 457 474 5.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 524 540 0.49 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 421 438 0.32 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 23 40 0.076 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 201 217 0.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 579 595 4.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 60 76 0.28 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 505 522 0.95 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 598 614 0.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 248 265 0.59 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 625 640 0.15 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 746 763 0.013 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 267 283 0.091 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 764 780 0.65 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 440 456 2.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 685 698 64.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 822 838 8.2 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 840 856 0.028 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 42 58 0.0068 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 857 874 0.24 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 359 368 57.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 285 301 6.8 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 116 133 0.063 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 728 745 0.049 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 621 639 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1316 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 290 392 1.19E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 465 562 6.8E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 445 463 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 640 695 1.6E-5 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 150 215 9.3E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 216 293 1.2E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 1 46 3.0E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 86 149 1.1E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 467 553 3.1E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 281 299 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1316 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 573 720 3.66E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 612 630 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1316 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 767 924 3.27E-23 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 182 310 9.16E-20 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 454 472 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 390 466 1.6E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 696 779 7.0E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 529 547 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1316 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 47 85 1.3E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1316 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 272 290 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0968 ab8d196b7127b888479699ff7beeec6c 233 Pfam PF13545 Crp-like helix-turn-helix domain 163 231 2.0E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_0968 ab8d196b7127b888479699ff7beeec6c 233 SUPERFAMILY SSF46785 161 232 7.21E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0968 ab8d196b7127b888479699ff7beeec6c 233 SMART SM00419 175 230 0.0025 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_0968 ab8d196b7127b888479699ff7beeec6c 233 Gene3D G3DSA:2.60.120.10 42 158 3.0E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_0968 ab8d196b7127b888479699ff7beeec6c 233 Gene3D G3DSA:1.10.10.10 161 233 1.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0968 ab8d196b7127b888479699ff7beeec6c 233 SMART SM00100 26 143 2.2E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_0968 ab8d196b7127b888479699ff7beeec6c 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 198 2.8E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_0968 ab8d196b7127b888479699ff7beeec6c 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 198 213 2.8E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_0968 ab8d196b7127b888479699ff7beeec6c 233 SUPERFAMILY SSF51206 19 157 5.11E-23 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like TMO_0968 ab8d196b7127b888479699ff7beeec6c 233 Pfam PF00027 Cyclic nucleotide-binding domain 45 127 3.9E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_0321 b341b1143eed499c9b7499abd34a1e87 467 Gene3D G3DSA:3.40.190.10 201 455 2.4E-109 T 14-10-2018 TMO_0321 b341b1143eed499c9b7499abd34a1e87 467 Pfam PF13379 NMT1-like family 110 346 7.9E-82 T 14-10-2018 TMO_0321 b341b1143eed499c9b7499abd34a1e87 467 Gene3D G3DSA:3.40.190.10 115 450 2.4E-109 T 14-10-2018 TMO_0321 b341b1143eed499c9b7499abd34a1e87 467 SUPERFAMILY SSF53850 111 335 1.67E-35 T 14-10-2018 TMO_c0643 545f3e368d0c6efdf2bd52e789f89fbd 475 Gene3D G3DSA:3.30.70.2190 226 346 2.5E-31 T 14-10-2018 TMO_c0643 545f3e368d0c6efdf2bd52e789f89fbd 475 Gene3D G3DSA:3.30.70.2740 349 431 1.4E-22 T 14-10-2018 TMO_c0643 545f3e368d0c6efdf2bd52e789f89fbd 475 SUPERFAMILY SSF56176 10 223 7.01E-74 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_c0643 545f3e368d0c6efdf2bd52e789f89fbd 475 Gene3D G3DSA:3.30.465.10 103 224 5.6E-44 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TMO_c0643 545f3e368d0c6efdf2bd52e789f89fbd 475 Pfam PF01565 FAD binding domain 49 185 7.5E-35 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TMO_c0643 545f3e368d0c6efdf2bd52e789f89fbd 475 Pfam PF02913 FAD linked oxidases, C-terminal domain 226 468 1.3E-39 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TMO_c0643 545f3e368d0c6efdf2bd52e789f89fbd 475 SUPERFAMILY SSF55103 198 468 3.11E-43 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TMO_c0643 545f3e368d0c6efdf2bd52e789f89fbd 475 Gene3D G3DSA:3.30.43.10 3 101 3.4E-27 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 TMO_1898 f532023db9aaadc54567dd42a0837244 409 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 398 3.5E-169 T 14-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative TMO_1898 f532023db9aaadc54567dd42a0837244 409 SUPERFAMILY SSF102114 47 195 3.79E-16 T 14-10-2018 TMO_1898 f532023db9aaadc54567dd42a0837244 409 SUPERFAMILY SSF47781 308 381 2.56E-8 T 14-10-2018 IPR010994 RuvA domain 2-like TMO_1898 f532023db9aaadc54567dd42a0837244 409 Pfam PF04055 Radical SAM superfamily 64 197 1.5E-7 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_1898 f532023db9aaadc54567dd42a0837244 409 SMART SM00729 58 284 2.1E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_1898 f532023db9aaadc54567dd42a0837244 409 Gene3D G3DSA:3.20.20.70 53 195 1.4E-8 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_0352 4c334d44beaaaa1d0d163d6ff4537c75 278 Gene3D G3DSA:1.10.8.760 135 205 1.3E-17 T 14-10-2018 TMO_0352 4c334d44beaaaa1d0d163d6ff4537c75 278 Gene3D G3DSA:3.40.50.11550 16 255 1.3E-17 T 14-10-2018 TMO_0352 4c334d44beaaaa1d0d163d6ff4537c75 278 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 24 243 4.2E-55 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN TMO_0352 4c334d44beaaaa1d0d163d6ff4537c75 278 SUPERFAMILY SSF159501 5 277 3.24E-54 T 14-10-2018 TMO_3034 c04aad6d8ef2564fbcf36f7800ac59ab 433 SUPERFAMILY SSF55073 245 431 1.08E-40 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_3034 c04aad6d8ef2564fbcf36f7800ac59ab 433 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 247 425 2.6E-19 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_3034 c04aad6d8ef2564fbcf36f7800ac59ab 433 Gene3D G3DSA:3.30.70.1230 239 432 5.3E-38 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_3034 c04aad6d8ef2564fbcf36f7800ac59ab 433 SMART SM00044 212 416 2.4E-6 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_b0418 7a5fc1a0dd83b87a3924b30c38b93b76 110 Gene3D G3DSA:3.30.530.20 3 49 8.1E-6 T 14-10-2018 IPR023393 START-like domain superfamily TMO_b0418 7a5fc1a0dd83b87a3924b30c38b93b76 110 SUPERFAMILY SSF55961 4 98 3.34E-17 T 14-10-2018 TMO_b0418 7a5fc1a0dd83b87a3924b30c38b93b76 110 Gene3D G3DSA:3.30.530.20 50 110 1.3E-7 T 14-10-2018 IPR023393 START-like domain superfamily TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 SUPERFAMILY SSF55874 737 903 5.5E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 SMART SM00388 679 747 1.1E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 Gene3D G3DSA:3.40.50.300 19 229 1.0E-98 T 14-10-2018 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 Gene3D G3DSA:1.10.287.130 672 746 8.5E-16 T 14-10-2018 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 SUPERFAMILY SSF52402 251 364 7.37E-7 T 14-10-2018 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 795 902 7.5E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 9.8E-97 T 14-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 Gene3D G3DSA:3.30.450.40 523 671 1.5E-33 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 830 844 4.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 889 902 4.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 848 858 4.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 864 882 4.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 Gene3D G3DSA:1.20.120.620 410 512 7.5E-25 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 SMART SM00387 791 905 7.8E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 SUPERFAMILY SSF47384 675 747 2.35E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 Pfam PF00512 His Kinase A (phospho-acceptor) domain 681 747 5.6E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 Pfam PF13492 GAF domain 537 660 6.1E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 Gene3D G3DSA:3.30.565.10 753 906 8.5E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 Pfam PF13493 Domain of unknown function (DUF4118) 416 517 5.7E-28 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain TMO_0451 fa2611d89f4262eaf24f2d5e22194803 915 SUPERFAMILY SSF55781 537 669 4.36E-8 T 14-10-2018 TMO_c0733 7db5a838cbb17a9dca7891af7de3c22e 447 Gene3D G3DSA:3.30.470.130 1 444 1.0E-190 T 14-10-2018 TMO_c0733 7db5a838cbb17a9dca7891af7de3c22e 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 3.0E-79 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_c0733 7db5a838cbb17a9dca7891af7de3c22e 447 SMART SM00878 335 440 7.6E-63 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_c0733 7db5a838cbb17a9dca7891af7de3c22e 447 Pfam PF02785 Biotin carboxylase C-terminal domain 335 440 4.2E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_c0733 7db5a838cbb17a9dca7891af7de3c22e 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_c0733 7db5a838cbb17a9dca7891af7de3c22e 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 442 8.0E-215 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 TMO_c0733 7db5a838cbb17a9dca7891af7de3c22e 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.7E-47 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_c0733 7db5a838cbb17a9dca7891af7de3c22e 447 SUPERFAMILY SSF56059 83 341 1.2E-71 T 14-10-2018 TMO_c0733 7db5a838cbb17a9dca7891af7de3c22e 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_c0733 7db5a838cbb17a9dca7891af7de3c22e 447 SUPERFAMILY SSF51246 330 442 1.46E-41 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TMO_c0733 7db5a838cbb17a9dca7891af7de3c22e 447 SUPERFAMILY SSF52440 1 113 9.35E-51 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_3466 28dd39c4fd8fec7f9aca1892a6aaad3d 134 SUPERFAMILY SSF52980 19 129 1.23E-16 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TMO_3466 28dd39c4fd8fec7f9aca1892a6aaad3d 134 Gene3D G3DSA:3.40.1350.10 23 133 2.0E-22 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TMO_3466 28dd39c4fd8fec7f9aca1892a6aaad3d 134 Pfam PF02021 Uncharacterised protein family UPF0102 24 116 7.9E-18 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 TMO_3466 28dd39c4fd8fec7f9aca1892a6aaad3d 134 Hamap MF_00048 UPF0102 protein YraN [yraN]. 17 129 17.187 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 TMO_c0531 0417853c696fce4016909e4fa331ac82 504 Gene3D G3DSA:3.40.640.10 86 356 2.9E-195 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0531 0417853c696fce4016909e4fa331ac82 504 PIRSF PIRSF001386 28 496 1.7E-207 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 TMO_c0531 0417853c696fce4016909e4fa331ac82 504 Gene3D G3DSA:3.90.1150.10 34 490 2.9E-195 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0531 0417853c696fce4016909e4fa331ac82 504 Pfam PF01212 Beta-eliminating lyase 74 461 5.4E-91 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 TMO_c0531 0417853c696fce4016909e4fa331ac82 504 Hamap MF_00544 Tryptophanase [tnaA]. 29 495 96.975 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 TMO_c0531 0417853c696fce4016909e4fa331ac82 504 SUPERFAMILY SSF53383 31 494 1.81E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_a0473 d6302b29461a2bbc7d6dce7271f3e1a9 100 SUPERFAMILY SSF55961 1 83 1.07E-14 T 14-10-2018 TMO_a0473 d6302b29461a2bbc7d6dce7271f3e1a9 100 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 2 80 7.1E-8 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like TMO_a0473 d6302b29461a2bbc7d6dce7271f3e1a9 100 Gene3D G3DSA:3.30.530.20 1 84 5.7E-15 T 14-10-2018 IPR023393 START-like domain superfamily TMO_2421 4065a61f58d36e8eda590ce4fc5f930a 586 Gene3D G3DSA:3.40.50.12780 22 428 3.4E-75 T 14-10-2018 TMO_2421 4065a61f58d36e8eda590ce4fc5f930a 586 Gene3D G3DSA:3.30.300.30 429 531 1.4E-24 T 14-10-2018 TMO_2421 4065a61f58d36e8eda590ce4fc5f930a 586 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_2421 4065a61f58d36e8eda590ce4fc5f930a 586 Pfam PF13193 AMP-binding enzyme C-terminal domain 443 518 1.4E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_2421 4065a61f58d36e8eda590ce4fc5f930a 586 SUPERFAMILY SSF56801 21 527 1.11E-112 T 14-10-2018 TMO_2421 4065a61f58d36e8eda590ce4fc5f930a 586 Pfam PF00501 AMP-binding enzyme 27 433 8.5E-74 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0481 f86bf6bb777fd8002db19f5ded4a6a2c 410 SUPERFAMILY SSF103473 7 403 7.46E-49 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_a0481 f86bf6bb777fd8002db19f5ded4a6a2c 410 Pfam PF07690 Major Facilitator Superfamily 31 370 3.3E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_a0481 f86bf6bb777fd8002db19f5ded4a6a2c 410 Gene3D G3DSA:1.20.1250.20 20 201 5.2E-18 T 14-10-2018 TMO_a0481 f86bf6bb777fd8002db19f5ded4a6a2c 410 Gene3D G3DSA:1.20.1250.20 219 408 4.2E-18 T 14-10-2018 TMO_a0282 d31a1fb56cc18ddb568313fd9122a43b 247 Gene3D G3DSA:3.40.50.12500 8 247 1.1E-62 T 14-10-2018 TMO_a0282 d31a1fb56cc18ddb568313fd9122a43b 247 PIRSF PIRSF015736 1 247 5.2E-55 T 14-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase TMO_2814 e66dd227423cfd8382131dc06c496269 279 SUPERFAMILY SSF81464 28 121 1.42E-28 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2814 e66dd227423cfd8382131dc06c496269 279 Gene3D G3DSA:2.60.40.420 125 260 2.1E-56 T 14-10-2018 IPR008972 Cupredoxin TMO_2814 e66dd227423cfd8382131dc06c496269 279 SUPERFAMILY SSF49503 126 258 4.48E-56 T 14-10-2018 IPR008972 Cupredoxin TMO_2814 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 211 228 2.3E-57 T 14-10-2018 TMO_2814 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 90 102 2.3E-57 T 14-10-2018 TMO_2814 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 102 122 2.3E-57 T 14-10-2018 TMO_2814 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 124 143 2.3E-57 T 14-10-2018 TMO_2814 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 191 211 2.3E-57 T 14-10-2018 TMO_2814 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 229 246 2.3E-57 T 14-10-2018 TMO_2814 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 167 188 2.3E-57 T 14-10-2018 TMO_2814 e66dd227423cfd8382131dc06c496269 279 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 192 240 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2814 e66dd227423cfd8382131dc06c496269 279 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 40 256 7.9E-62 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2814 e66dd227423cfd8382131dc06c496269 279 Gene3D G3DSA:1.10.287.90 30 124 3.7E-32 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2814 e66dd227423cfd8382131dc06c496269 279 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 128 246 2.4E-55 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2814 e66dd227423cfd8382131dc06c496269 279 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 29 116 1.1E-23 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2816 cee42431d84006318057da8e89e010dc 724 Pfam PF11874 Domain of unknown function (DUF3394) 638 687 4.9E-12 T 14-10-2018 IPR021814 Protein of unknown function DUF3394 TMO_2816 cee42431d84006318057da8e89e010dc 724 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 45 705 4.2E-205 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ TMO_2816 cee42431d84006318057da8e89e010dc 724 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 159 619 2.2E-83 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_3546 b821bceb8611343e8381050976e72c8b 748 SMART SM00322 559 624 3.7E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 TMO_3546 b821bceb8611343e8381050976e72c8b 748 Gene3D G3DSA:2.40.50.140 629 701 1.4E-29 T 14-10-2018 TMO_3546 b821bceb8611343e8381050976e72c8b 748 SMART SM00316 627 697 1.6E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 TMO_3546 b821bceb8611343e8381050976e72c8b 748 Gene3D G3DSA:3.30.230.70 2 238 6.4E-86 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_3546 b821bceb8611343e8381050976e72c8b 748 Pfam PF03725 3' exoribonuclease family, domain 2 467 535 1.3E-5 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_3546 b821bceb8611343e8381050976e72c8b 748 Pfam PF03725 3' exoribonuclease family, domain 2 155 219 4.7E-12 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_3546 b821bceb8611343e8381050976e72c8b 748 SUPERFAMILY SSF54211 6 152 3.64E-53 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_3546 b821bceb8611343e8381050976e72c8b 748 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 250 327 2.0E-17 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TMO_3546 b821bceb8611343e8381050976e72c8b 748 Pfam PF01138 3' exoribonuclease family, domain 1 22 152 1.0E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_3546 b821bceb8611343e8381050976e72c8b 748 Pfam PF01138 3' exoribonuclease family, domain 1 331 463 6.4E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_3546 b821bceb8611343e8381050976e72c8b 748 Pfam PF00013 KH domain 563 620 8.5E-11 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 TMO_3546 b821bceb8611343e8381050976e72c8b 748 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 19 698 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TMO_3546 b821bceb8611343e8381050976e72c8b 748 SUPERFAMILY SSF55666 146 239 2.94E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_3546 b821bceb8611343e8381050976e72c8b 748 Gene3D G3DSA:3.30.1370.10 557 628 7.9E-20 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TMO_3546 b821bceb8611343e8381050976e72c8b 748 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 11 700 30.91 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TMO_3546 b821bceb8611343e8381050976e72c8b 748 Gene3D G3DSA:3.30.230.70 243 556 5.4E-112 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_3546 b821bceb8611343e8381050976e72c8b 748 SUPERFAMILY SSF54211 298 495 1.82E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_3546 b821bceb8611343e8381050976e72c8b 748 Pfam PF00575 S1 RNA binding domain 625 697 1.4E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 TMO_3546 b821bceb8611343e8381050976e72c8b 748 PIRSF PIRSF005499 9 729 9.3E-296 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TMO_3546 b821bceb8611343e8381050976e72c8b 748 SUPERFAMILY SSF55666 457 555 1.21E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_3546 b821bceb8611343e8381050976e72c8b 748 SUPERFAMILY SSF54791 561 647 6.07E-22 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TMO_3546 b821bceb8611343e8381050976e72c8b 748 SUPERFAMILY SSF50249 627 704 9.36E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_2147 59d1bf3207d015f167b49bb90af6c665 275 SMART SM00382 35 218 5.9E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2147 59d1bf3207d015f167b49bb90af6c665 275 SUPERFAMILY SSF52540 8 228 4.41E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2147 59d1bf3207d015f167b49bb90af6c665 275 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2147 59d1bf3207d015f167b49bb90af6c665 275 Gene3D G3DSA:3.40.50.300 6 250 7.3E-66 T 14-10-2018 TMO_2147 59d1bf3207d015f167b49bb90af6c665 275 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 26 256 4.4E-101 T 14-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 TMO_2147 59d1bf3207d015f167b49bb90af6c665 275 Pfam PF00005 ABC transporter 26 168 1.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0126 f21b2934486e3ec1418e1c14d3c5e8e6 198 SUPERFAMILY SSF52833 1 189 1.94E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_0126 f21b2934486e3ec1418e1c14d3c5e8e6 198 Gene3D G3DSA:3.40.30.10 35 198 5.2E-43 T 14-10-2018 TMO_0126 f21b2934486e3ec1418e1c14d3c5e8e6 198 Pfam PF08534 Redoxin 55 179 6.0E-17 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 TMO_3427 3e9fb90e8fc1e67ac7fd2331f6e98fbe 299 Pfam PF00685 Sulfotransferase domain 5 272 1.7E-27 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 TMO_3427 3e9fb90e8fc1e67ac7fd2331f6e98fbe 299 SUPERFAMILY SSF52540 4 274 2.24E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3427 3e9fb90e8fc1e67ac7fd2331f6e98fbe 299 Gene3D G3DSA:3.40.50.300 1 275 1.4E-47 T 14-10-2018 TMO_1659 f002e0b993afe1d5b5df4c7a69b1c92c 432 Gene3D G3DSA:1.20.1250.20 36 432 7.1E-53 T 14-10-2018 TMO_1659 f002e0b993afe1d5b5df4c7a69b1c92c 432 Pfam PF07690 Major Facilitator Superfamily 45 272 3.1E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_1659 f002e0b993afe1d5b5df4c7a69b1c92c 432 SUPERFAMILY SSF103473 30 430 1.57E-65 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0580 56aae80670f82baeb4fde5b6d1007597 243 SUPERFAMILY SSF64288 65 241 2.67E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_c0580 56aae80670f82baeb4fde5b6d1007597 243 Gene3D G3DSA:3.40.1410.10 86 241 2.3E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_c0580 56aae80670f82baeb4fde5b6d1007597 243 SUPERFAMILY SSF46785 8 90 8.56E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0580 56aae80670f82baeb4fde5b6d1007597 243 SMART SM00866 98 237 1.2E-22 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_c0580 56aae80670f82baeb4fde5b6d1007597 243 Gene3D G3DSA:1.10.10.10 12 81 4.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0580 56aae80670f82baeb4fde5b6d1007597 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 1.8E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0580 56aae80670f82baeb4fde5b6d1007597 243 Pfam PF07702 UTRA domain 102 232 5.9E-23 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_c0580 56aae80670f82baeb4fde5b6d1007597 243 SMART SM00345 18 77 3.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0714 94d995df6a95f1bc448c9693d0223bed 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 36 92 5.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0714 94d995df6a95f1bc448c9693d0223bed 328 SUPERFAMILY SSF53850 117 321 4.1E-40 T 14-10-2018 TMO_c0714 94d995df6a95f1bc448c9693d0223bed 328 Gene3D G3DSA:1.10.10.10 25 113 3.7E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0714 94d995df6a95f1bc448c9693d0223bed 328 Gene3D G3DSA:3.40.190.10 117 320 1.7E-62 T 14-10-2018 TMO_c0714 94d995df6a95f1bc448c9693d0223bed 328 SUPERFAMILY SSF46785 32 112 2.58E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0714 94d995df6a95f1bc448c9693d0223bed 328 Pfam PF03466 LysR substrate binding domain 122 322 4.1E-24 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0714 94d995df6a95f1bc448c9693d0223bed 328 Gene3D G3DSA:3.40.190.10 198 296 1.7E-62 T 14-10-2018 TMO_c0714 94d995df6a95f1bc448c9693d0223bed 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 72 83 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0714 94d995df6a95f1bc448c9693d0223bed 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0714 94d995df6a95f1bc448c9693d0223bed 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 62 72 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1507 82d478b1653afb144106ee4c4164fc02 401 Gene3D G3DSA:1.10.3210.10 4 396 2.4E-126 T 14-10-2018 TMO_1507 82d478b1653afb144106ee4c4164fc02 401 SUPERFAMILY SSF109604 22 398 1.75E-85 T 14-10-2018 TMO_1507 82d478b1653afb144106ee4c4164fc02 401 Pfam PF13286 Phosphohydrolase-associated domain 303 393 1.2E-24 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain TMO_1507 82d478b1653afb144106ee4c4164fc02 401 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 34 395 3.7E-97 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 TMO_1507 82d478b1653afb144106ee4c4164fc02 401 Pfam PF01966 HD domain 71 215 1.2E-16 T 14-10-2018 IPR006674 HD domain TMO_1507 82d478b1653afb144106ee4c4164fc02 401 SMART SM00471 67 226 9.0E-14 T 14-10-2018 IPR003607 HD/PDEase domain TMO_1507 82d478b1653afb144106ee4c4164fc02 401 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 13 395 38.032 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 TMO_b0138 59f5b0c514dfbc47c74ea2863b87511c 448 Pfam PF08241 Methyltransferase domain 110 204 5.8E-6 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TMO_b0138 59f5b0c514dfbc47c74ea2863b87511c 448 Gene3D G3DSA:3.40.50.150 54 295 7.9E-21 T 14-10-2018 TMO_b0138 59f5b0c514dfbc47c74ea2863b87511c 448 SUPERFAMILY SSF53335 99 264 3.52E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_3155 286f53c517d5858f1def75e3f36665e0 303 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 294 9.5E-28 T 14-10-2018 IPR000160 GGDEF domain TMO_3155 286f53c517d5858f1def75e3f36665e0 303 SMART SM00267 134 303 1.0E-24 T 14-10-2018 IPR000160 GGDEF domain TMO_3155 286f53c517d5858f1def75e3f36665e0 303 SUPERFAMILY SSF55073 150 293 2.88E-27 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_3155 286f53c517d5858f1def75e3f36665e0 303 Gene3D G3DSA:3.30.70.270 133 302 3.6E-34 T 14-10-2018 TMO_3155 286f53c517d5858f1def75e3f36665e0 303 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 294 1.3E-26 T 14-10-2018 IPR000160 GGDEF domain TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 Gene3D G3DSA:3.40.50.300 111 277 2.0E-101 T 14-10-2018 TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 SUPERFAMILY SSF54980 395 468 6.12E-14 T 14-10-2018 IPR035647 EF-G domain III/V-like TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 59 74 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 PRINTS PR00315 GTP-binding elongation factor signature 102 113 7.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 PRINTS PR00315 GTP-binding elongation factor signature 66 74 7.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 PRINTS PR00315 GTP-binding elongation factor signature 86 96 7.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 PRINTS PR00315 GTP-binding elongation factor signature 16 29 7.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 PRINTS PR00315 GTP-binding elongation factor signature 138 147 7.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 5 529 49.778 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 Gene3D G3DSA:3.40.50.300 74 381 2.0E-101 T 14-10-2018 TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 SUPERFAMILY SSF50447 263 395 5.65E-26 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 Gene3D G3DSA:3.30.70.3280 392 532 4.4E-41 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 Pfam PF00009 Elongation factor Tu GTP binding domain 14 279 1.3E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 Pfam PF03144 Elongation factor Tu domain 2 316 382 8.0E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 9 529 4.1E-203 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 SUPERFAMILY SSF52540 10 280 1.23E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 Pfam PF16658 Class II release factor RF3, C-terminal domain 389 516 4.2E-41 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal TMO_0561 90b79ec110f0a63764378da51d06ad9e 533 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 149 9.9E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_c0805 13d2b669f2d343933d7611cd5bebe1ed 299 Pfam PF02353 Mycolic acid cyclopropane synthetase 22 292 1.1E-52 T 14-10-2018 TMO_c0805 13d2b669f2d343933d7611cd5bebe1ed 299 SUPERFAMILY SSF53335 26 297 8.14E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0805 13d2b669f2d343933d7611cd5bebe1ed 299 Gene3D G3DSA:3.40.50.150 25 299 6.3E-64 T 14-10-2018 TMO_c0805 13d2b669f2d343933d7611cd5bebe1ed 299 PIRSF PIRSF003085 4 299 5.7E-54 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 TMO_0732 026f11d7c21b428df85f42faa44ab256 299 Pfam PF03466 LysR substrate binding domain 87 293 2.0E-36 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0732 026f11d7c21b428df85f42faa44ab256 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.6E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0732 026f11d7c21b428df85f42faa44ab256 299 SUPERFAMILY SSF46785 1 84 1.22E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0732 026f11d7c21b428df85f42faa44ab256 299 Gene3D G3DSA:3.40.190.10 88 287 9.6E-58 T 14-10-2018 TMO_0732 026f11d7c21b428df85f42faa44ab256 299 Gene3D G3DSA:1.10.10.10 1 85 1.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0732 026f11d7c21b428df85f42faa44ab256 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0732 026f11d7c21b428df85f42faa44ab256 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0732 026f11d7c21b428df85f42faa44ab256 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0732 026f11d7c21b428df85f42faa44ab256 299 Gene3D G3DSA:3.40.190.10 164 270 9.6E-58 T 14-10-2018 TMO_0732 026f11d7c21b428df85f42faa44ab256 299 SUPERFAMILY SSF53850 88 297 2.29E-33 T 14-10-2018 TMO_1632 0a9af0e8c29029b31d270ccc0234b713 703 Gene3D G3DSA:1.10.287.950 401 700 6.5E-55 T 14-10-2018 TMO_1632 0a9af0e8c29029b31d270ccc0234b713 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 509 665 1.7E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_1632 0a9af0e8c29029b31d270ccc0234b713 703 Gene3D G3DSA:1.20.1480.50 310 400 6.5E-11 T 14-10-2018 TMO_1632 0a9af0e8c29029b31d270ccc0234b713 703 Gene3D G3DSA:3.30.450.20 63 209 4.9E-60 T 14-10-2018 TMO_1632 0a9af0e8c29029b31d270ccc0234b713 703 Gene3D G3DSA:3.30.450.20 54 309 4.9E-60 T 14-10-2018 TMO_1632 0a9af0e8c29029b31d270ccc0234b713 703 SMART SM00304 343 396 0.052 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_1632 0a9af0e8c29029b31d270ccc0234b713 703 SMART SM00304 593 646 35.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_1632 0a9af0e8c29029b31d270ccc0234b713 703 Pfam PF02743 Cache domain 38 273 7.1E-13 T 14-10-2018 IPR033479 Double Cache domain 1 TMO_1632 0a9af0e8c29029b31d270ccc0234b713 703 SUPERFAMILY SSF58104 371 684 1.09E-59 T 14-10-2018 TMO_1632 0a9af0e8c29029b31d270ccc0234b713 703 SMART SM00283 440 687 6.3E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0032 437743b38bbd022e05497cca196a022d 301 Pfam PF01614 Bacterial transcriptional regulator 160 279 1.3E-13 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_0032 437743b38bbd022e05497cca196a022d 301 Gene3D G3DSA:1.10.10.10 35 112 6.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0032 437743b38bbd022e05497cca196a022d 301 Pfam PF09339 IclR helix-turn-helix domain 39 89 1.1E-14 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_0032 437743b38bbd022e05497cca196a022d 301 SUPERFAMILY SSF55781 103 281 2.94E-42 T 14-10-2018 TMO_0032 437743b38bbd022e05497cca196a022d 301 SUPERFAMILY SSF46785 37 112 2.33E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0032 437743b38bbd022e05497cca196a022d 301 Gene3D G3DSA:3.30.450.40 113 284 3.8E-40 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_0032 437743b38bbd022e05497cca196a022d 301 SMART SM00346 37 128 3.2E-25 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 Pfam PF03949 Malic enzyme, NAD binding domain 165 357 3.7E-20 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 SMART SM00919 163 400 5.1E-132 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 748 9.5E-90 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 Gene3D G3DSA:3.40.50.10750 572 725 2.1E-88 T 14-10-2018 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 SMART SM01274 18 151 3.9E-79 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 PIRSF PIRSF036684 1 757 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 Pfam PF00390 Malic enzyme, N-terminal domain 20 151 1.3E-27 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 Gene3D G3DSA:3.40.50.10950 445 749 2.1E-88 T 14-10-2018 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 SUPERFAMILY SSF53223 10 161 2.37E-52 T 14-10-2018 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 Gene3D G3DSA:3.40.50.720 161 444 2.3E-81 T 14-10-2018 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 SUPERFAMILY SSF51735 163 452 1.04E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 Gene3D G3DSA:3.40.50.10380 1 160 1.1E-67 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 TMO_2592 0a7c6ad9cb37b4069583b20e20befdc2 769 SUPERFAMILY SSF53659 429 752 4.52E-85 T 14-10-2018 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 258 283 1.1E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 90 112 1.1E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 236 258 1.1E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 1.1E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 112 139 1.1E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 1.1E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 Gene3D G3DSA:3.40.50.170 89 284 5.3E-71 T 14-10-2018 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 Gene3D G3DSA:3.30.70.260 4 88 6.6E-22 T 14-10-2018 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 PIRSF PIRSF036480 5 285 6.0E-106 T 14-10-2018 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 SUPERFAMILY SSF55021 7 86 3.79E-12 T 14-10-2018 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 Pfam PF00551 Formyl transferase 90 266 9.2E-36 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 284 5.5E-100 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 SUPERFAMILY SSF53328 90 285 7.98E-62 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_c0563 afa6b8008875475c59ca57bf3973744a 285 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 284 46.469 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TMO_b0467 4f931e2c2bd12ed4dadc27f0bdd1f7a2 302 SUPERFAMILY SSF51569 7 294 3.77E-70 T 14-10-2018 TMO_b0467 4f931e2c2bd12ed4dadc27f0bdd1f7a2 302 Gene3D G3DSA:3.20.20.70 8 297 2.0E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_b0467 4f931e2c2bd12ed4dadc27f0bdd1f7a2 302 PIRSF PIRSF001365 6 300 2.5E-64 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_b0467 4f931e2c2bd12ed4dadc27f0bdd1f7a2 302 SMART SM01130 9 295 6.1E-68 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_b0467 4f931e2c2bd12ed4dadc27f0bdd1f7a2 302 Pfam PF00701 Dihydrodipicolinate synthetase family 10 292 1.7E-52 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_2970 74cdd7d31bbfc29d3e7ea9c242cd5505 203 Pfam PF01467 Cytidylyltransferase-like 5 186 1.5E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_2970 74cdd7d31bbfc29d3e7ea9c242cd5505 203 SUPERFAMILY SSF52374 1 186 2.44E-38 T 14-10-2018 TMO_2970 74cdd7d31bbfc29d3e7ea9c242cd5505 203 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 177 20.759 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TMO_2970 74cdd7d31bbfc29d3e7ea9c242cd5505 203 Gene3D G3DSA:3.40.50.620 1 195 7.4E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_2970 74cdd7d31bbfc29d3e7ea9c242cd5505 203 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 187 2.2E-33 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TMO_c0658 1a437dd487ecae4c9475be91f2b624bb 354 Gene3D G3DSA:2.60.120.10 14 354 5.2E-107 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_c0658 1a437dd487ecae4c9475be91f2b624bb 354 Pfam PF07883 Cupin domain 98 165 1.3E-16 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_c0658 1a437dd487ecae4c9475be91f2b624bb 354 SUPERFAMILY SSF51182 14 353 1.08E-88 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 SUPERFAMILY SSF82693 8 90 1.92E-19 T 14-10-2018 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 Pfam PF00873 AcrB/AcrD/AcrF family 8 959 2.3E-245 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 SUPERFAMILY SSF82866 740 964 1.31E-47 T 14-10-2018 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 SUPERFAMILY SSF82866 248 445 9.55E-43 T 14-10-2018 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 SUPERFAMILY SSF82693 509 606 1.67E-14 T 14-10-2018 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 SUPERFAMILY SSF82714 655 741 8.37E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 Gene3D G3DSA:3.30.70.1430 8 750 1.2E-270 T 14-10-2018 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 Gene3D G3DSA:3.30.70.1440 604 799 1.2E-270 T 14-10-2018 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 Gene3D G3DSA:1.20.1640.10 283 456 1.2E-270 T 14-10-2018 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 Gene3D G3DSA:3.30.2090.10 135 225 1.2E-270 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 PRINTS PR00702 Acriflavin resistance protein family signature 496 513 3.8E-54 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 PRINTS PR00702 Acriflavin resistance protein family signature 341 365 3.8E-54 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 PRINTS PR00702 Acriflavin resistance protein family signature 394 417 3.8E-54 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 PRINTS PR00702 Acriflavin resistance protein family signature 419 442 3.8E-54 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 PRINTS PR00702 Acriflavin resistance protein family signature 286 309 3.8E-54 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 PRINTS PR00702 Acriflavin resistance protein family signature 313 334 3.8E-54 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 PRINTS PR00702 Acriflavin resistance protein family signature 559 573 3.8E-54 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 Gene3D G3DSA:3.30.70.1320 91 282 1.2E-270 T 14-10-2018 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 Gene3D G3DSA:1.20.1640.10 457 956 1.2E-270 T 14-10-2018 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 SUPERFAMILY SSF82714 139 222 2.49E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 Gene3D G3DSA:3.30.2090.10 654 742 1.2E-270 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 SUPERFAMILY SSF82693 92 280 2.51E-20 T 14-10-2018 TMO_c0600 3e08181dd7ca30551f06fd56316fd84b 987 Gene3D G3DSA:3.30.70.1430 511 603 1.2E-270 T 14-10-2018 TMO_b0493 65129b89a705eb6f81830ccdd5214717 535 Gene3D G3DSA:3.90.76.10 67 214 6.7E-103 T 14-10-2018 TMO_b0493 65129b89a705eb6f81830ccdd5214717 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 454 1.8E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_b0493 65129b89a705eb6f81830ccdd5214717 535 Gene3D G3DSA:3.40.190.10 215 519 6.7E-103 T 14-10-2018 TMO_b0493 65129b89a705eb6f81830ccdd5214717 535 SUPERFAMILY SSF53850 55 534 7.76E-114 T 14-10-2018 TMO_b0493 65129b89a705eb6f81830ccdd5214717 535 PIRSF PIRSF002741 24 533 2.1E-81 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_b0493 65129b89a705eb6f81830ccdd5214717 535 Gene3D G3DSA:3.10.105.10 290 509 6.7E-103 T 14-10-2018 TMO_a0377 d885a0a103cc4304725e763059677f60 623 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 67 386 7.7E-76 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TMO_a0377 d885a0a103cc4304725e763059677f60 623 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 425 614 6.1E-29 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 TMO_a0377 d885a0a103cc4304725e763059677f60 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 239 255 7.3E-25 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TMO_a0377 d885a0a103cc4304725e763059677f60 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 199 215 7.3E-25 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TMO_a0377 d885a0a103cc4304725e763059677f60 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 309 327 7.3E-25 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TMO_a0377 d885a0a103cc4304725e763059677f60 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 129 145 7.3E-25 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TMO_a0377 d885a0a103cc4304725e763059677f60 623 PRINTS PR00133 Glycosyl hydrolase family 3 signature 153 172 7.3E-25 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TMO_a0377 d885a0a103cc4304725e763059677f60 623 SUPERFAMILY SSF52279 425 614 4.58E-37 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TMO_a0377 d885a0a103cc4304725e763059677f60 623 Gene3D G3DSA:3.20.20.300 52 404 3.9E-121 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 TMO_a0377 d885a0a103cc4304725e763059677f60 623 Gene3D G3DSA:3.40.50.1700 411 622 5.3E-56 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TMO_a0377 d885a0a103cc4304725e763059677f60 623 SUPERFAMILY SSF51445 55 424 2.0E-99 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 49 278 6.0E-62 T 14-10-2018 TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 226 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 41 58 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 207 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 178 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 243 263 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 127 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 Gene3D G3DSA:3.40.50.720 2 280 9.8E-87 T 14-10-2018 TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 40 225 0.005 T 14-10-2018 TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 116 127 8.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 188 207 8.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 8.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0315 7061a79a38dc30f128af7e3a158c4f56 283 SUPERFAMILY SSF51735 38 280 9.28E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0515 fff6551cea5f20dca680e87b4d4b440c 308 Gene3D G3DSA:3.40.190.10 90 302 2.8E-54 T 14-10-2018 TMO_0515 fff6551cea5f20dca680e87b4d4b440c 308 Gene3D G3DSA:3.40.190.10 181 278 2.8E-54 T 14-10-2018 TMO_0515 fff6551cea5f20dca680e87b4d4b440c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0515 fff6551cea5f20dca680e87b4d4b440c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0515 fff6551cea5f20dca680e87b4d4b440c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0515 fff6551cea5f20dca680e87b4d4b440c 308 Pfam PF03466 LysR substrate binding domain 134 304 1.0E-20 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0515 fff6551cea5f20dca680e87b4d4b440c 308 Gene3D G3DSA:1.10.10.10 1 87 1.6E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0515 fff6551cea5f20dca680e87b4d4b440c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 4.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0515 fff6551cea5f20dca680e87b4d4b440c 308 SUPERFAMILY SSF53850 90 305 2.17E-33 T 14-10-2018 TMO_0515 fff6551cea5f20dca680e87b4d4b440c 308 SUPERFAMILY SSF46785 3 84 1.33E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1163 10139d65b077b330747f369f86703476 998 PRINTS PR00702 Acriflavin resistance protein family signature 386 409 1.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1163 10139d65b077b330747f369f86703476 998 PRINTS PR00702 Acriflavin resistance protein family signature 411 434 1.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1163 10139d65b077b330747f369f86703476 998 PRINTS PR00702 Acriflavin resistance protein family signature 279 302 1.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1163 10139d65b077b330747f369f86703476 998 PRINTS PR00702 Acriflavin resistance protein family signature 333 357 1.2E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1163 10139d65b077b330747f369f86703476 998 Gene3D G3DSA:3.30.2090.10 658 746 1.6E-232 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_1163 10139d65b077b330747f369f86703476 998 SUPERFAMILY SSF82866 745 981 6.28E-41 T 14-10-2018 TMO_1163 10139d65b077b330747f369f86703476 998 Gene3D G3DSA:3.30.70.1430 4 754 1.6E-232 T 14-10-2018 TMO_1163 10139d65b077b330747f369f86703476 998 SUPERFAMILY SSF82866 239 438 6.41E-39 T 14-10-2018 TMO_1163 10139d65b077b330747f369f86703476 998 Gene3D G3DSA:3.30.2090.10 128 218 1.6E-232 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_1163 10139d65b077b330747f369f86703476 998 Gene3D G3DSA:3.30.70.1430 513 606 1.6E-232 T 14-10-2018 TMO_1163 10139d65b077b330747f369f86703476 998 Gene3D G3DSA:1.20.1640.10 276 456 1.6E-232 T 14-10-2018 TMO_1163 10139d65b077b330747f369f86703476 998 Gene3D G3DSA:1.20.1640.10 457 973 1.6E-232 T 14-10-2018 TMO_1163 10139d65b077b330747f369f86703476 998 Gene3D G3DSA:3.30.70.1440 607 804 1.6E-232 T 14-10-2018 TMO_1163 10139d65b077b330747f369f86703476 998 SUPERFAMILY SSF82693 3 84 9.94E-17 T 14-10-2018 TMO_1163 10139d65b077b330747f369f86703476 998 Gene3D G3DSA:3.30.70.1320 86 275 1.6E-232 T 14-10-2018 TMO_1163 10139d65b077b330747f369f86703476 998 Pfam PF00873 AcrB/AcrD/AcrF family 4 976 6.1E-156 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1163 10139d65b077b330747f369f86703476 998 SUPERFAMILY SSF82714 135 209 1.44E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_1163 10139d65b077b330747f369f86703476 998 SUPERFAMILY SSF82693 89 273 6.02E-17 T 14-10-2018 TMO_2490 b2c2c2fdae7d6582f4c7a96d553fae65 309 Pfam PF06719 AraC-type transcriptional regulator N-terminus 24 174 1.5E-43 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal TMO_2490 b2c2c2fdae7d6582f4c7a96d553fae65 309 Gene3D G3DSA:1.10.10.60 187 291 1.1E-27 T 14-10-2018 TMO_2490 b2c2c2fdae7d6582f4c7a96d553fae65 309 SUPERFAMILY SSF46689 187 237 5.67E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2490 b2c2c2fdae7d6582f4c7a96d553fae65 309 SUPERFAMILY SSF46689 239 290 2.37E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2490 b2c2c2fdae7d6582f4c7a96d553fae65 309 SMART SM00342 203 286 8.3E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2490 b2c2c2fdae7d6582f4c7a96d553fae65 309 Pfam PF12833 Helix-turn-helix domain 209 283 2.9E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_1923 d28de8715f11af6ccbe168ab4c0a6348 251 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 44 64 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site TMO_1923 d28de8715f11af6ccbe168ab4c0a6348 251 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 44 65 6.7E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site TMO_1923 d28de8715f11af6ccbe168ab4c0a6348 251 Pfam PF07963 Prokaryotic N-terminal methylation motif 43 65 1.7E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site TMO_1923 d28de8715f11af6ccbe168ab4c0a6348 251 SUPERFAMILY SSF54523 46 117 3.61E-8 T 14-10-2018 TMO_1722 890e7661c45e01bc83e3635f1a142f1c 423 Gene3D G3DSA:3.40.50.2300 143 385 1.1E-137 T 14-10-2018 TMO_1722 890e7661c45e01bc83e3635f1a142f1c 423 Pfam PF13433 Periplasmic binding protein domain 28 399 4.2E-174 T 14-10-2018 TMO_1722 890e7661c45e01bc83e3635f1a142f1c 423 Gene3D G3DSA:3.40.50.2300 30 366 1.1E-137 T 14-10-2018 TMO_1722 890e7661c45e01bc83e3635f1a142f1c 423 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 28 395 3.4E-176 T 14-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like TMO_1722 890e7661c45e01bc83e3635f1a142f1c 423 SUPERFAMILY SSF53822 27 400 1.38E-89 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_1391 eabe03f4a9a26ad9290bcc7b7bf7768f 291 Gene3D G3DSA:1.10.3720.10 8 285 7.6E-47 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1391 eabe03f4a9a26ad9290bcc7b7bf7768f 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 277 1.1E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1391 eabe03f4a9a26ad9290bcc7b7bf7768f 291 SUPERFAMILY SSF161098 10 282 2.49E-50 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0572 9cc10318708e573ba5b2e04ef66a40d8 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 8.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0572 9cc10318708e573ba5b2e04ef66a40d8 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 8.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0572 9cc10318708e573ba5b2e04ef66a40d8 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 8.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0572 9cc10318708e573ba5b2e04ef66a40d8 217 SUPERFAMILY SSF46894 138 206 8.5E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_c0572 9cc10318708e573ba5b2e04ef66a40d8 217 Gene3D G3DSA:3.40.50.2300 2 130 8.0E-28 T 14-10-2018 TMO_c0572 9cc10318708e573ba5b2e04ef66a40d8 217 SMART SM00421 145 202 2.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0572 9cc10318708e573ba5b2e04ef66a40d8 217 Gene3D G3DSA:1.10.10.10 146 214 1.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0572 9cc10318708e573ba5b2e04ef66a40d8 217 Pfam PF00072 Response regulator receiver domain 5 117 8.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0572 9cc10318708e573ba5b2e04ef66a40d8 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 7.7E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0572 9cc10318708e573ba5b2e04ef66a40d8 217 SUPERFAMILY SSF52172 1 129 9.82E-28 T 14-10-2018 IPR011006 CheY-like superfamily TMO_c0572 9cc10318708e573ba5b2e04ef66a40d8 217 SMART SM00448 3 117 5.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 SMART SM00928 426 471 9.1E-18 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 146 316 9.8E-45 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 439 450 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 SUPERFAMILY SSF52833 4 86 4.7E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 SUPERFAMILY SSF140490 423 508 4.84E-27 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 428 508 1.3E-30 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 Gene3D G3DSA:1.20.1440.230 424 517 7.4E-24 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 Gene3D G3DSA:3.40.50.11540 150 328 2.4E-73 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 Gene3D G3DSA:3.10.20.600 329 423 6.5E-22 T 14-10-2018 TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 264 279 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 SUPERFAMILY SSF142984 341 421 4.05E-19 T 14-10-2018 TMO_1020 8fb1d7b675ab21c9d2f2aba03997c2f3 518 SUPERFAMILY SSF142019 97 337 6.93E-86 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_3382 f7cdcd54f00c06251b78d9c1db34cc9a 231 SUPERFAMILY SSF100950 54 229 5.86E-38 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_3382 f7cdcd54f00c06251b78d9c1db34cc9a 231 Pfam PF02589 LUD domain 131 228 5.6E-25 T 14-10-2018 IPR003741 LUD domain TMO_3382 f7cdcd54f00c06251b78d9c1db34cc9a 231 Gene3D G3DSA:3.40.50.10420 52 229 1.3E-45 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily TMO_c0264 89d08b2b1a4e4b2c4ff6d432f92e1f37 287 Gene3D G3DSA:3.40.190.10 168 244 2.4E-16 T 14-10-2018 TMO_c0264 89d08b2b1a4e4b2c4ff6d432f92e1f37 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 3.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0264 89d08b2b1a4e4b2c4ff6d432f92e1f37 287 Gene3D G3DSA:1.10.10.10 1 90 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0264 89d08b2b1a4e4b2c4ff6d432f92e1f37 287 SUPERFAMILY SSF46785 1 107 1.42E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0264 89d08b2b1a4e4b2c4ff6d432f92e1f37 287 Gene3D G3DSA:3.40.190.10 91 167 2.4E-16 T 14-10-2018 TMO_c0264 89d08b2b1a4e4b2c4ff6d432f92e1f37 287 Pfam PF03466 LysR substrate binding domain 86 284 4.5E-23 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0264 89d08b2b1a4e4b2c4ff6d432f92e1f37 287 SUPERFAMILY SSF53850 87 286 6.52E-20 T 14-10-2018 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 SUPERFAMILY SSF48163 300 465 2.88E-36 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 Gene3D G3DSA:1.10.10.350 368 465 2.0E-24 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 31.21 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 6.7E-152 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 305 6.7E-94 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 SUPERFAMILY SSF52374 3 299 5.09E-109 T 14-10-2018 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 Gene3D G3DSA:3.40.50.620 1 315 3.8E-129 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 5.2E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.2E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.2E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 5.2E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_1765 b7ab3f3e2c743a467f7c763e4d0973b4 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.2E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_0899 713bd9b597ba20cc02c306327f04a821 215 Pfam PF14520 Helix-hairpin-helix domain 72 130 6.3E-13 T 14-10-2018 TMO_0899 713bd9b597ba20cc02c306327f04a821 215 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 206 6.4E-36 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TMO_0899 713bd9b597ba20cc02c306327f04a821 215 Gene3D G3DSA:1.10.150.20 66 147 9.2E-21 T 14-10-2018 TMO_0899 713bd9b597ba20cc02c306327f04a821 215 Pfam PF07499 RuvA, C-terminal domain 166 213 6.2E-11 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 TMO_0899 713bd9b597ba20cc02c306327f04a821 215 SUPERFAMILY SSF47781 65 132 1.11E-18 T 14-10-2018 IPR010994 RuvA domain 2-like TMO_0899 713bd9b597ba20cc02c306327f04a821 215 Gene3D G3DSA:1.10.8.10 163 213 6.7E-10 T 14-10-2018 TMO_0899 713bd9b597ba20cc02c306327f04a821 215 Gene3D G3DSA:2.40.50.140 1 65 2.8E-20 T 14-10-2018 TMO_0899 713bd9b597ba20cc02c306327f04a821 215 Pfam PF01330 RuvA N terminal domain 1 62 5.7E-18 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 TMO_0899 713bd9b597ba20cc02c306327f04a821 215 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 214 28.196 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TMO_0899 713bd9b597ba20cc02c306327f04a821 215 SUPERFAMILY SSF50249 1 63 1.37E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_0899 713bd9b597ba20cc02c306327f04a821 215 SUPERFAMILY SSF46929 167 214 1.06E-8 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily TMO_c0138 950650fc0daec3c53e684fbbad8a64f7 116 SUPERFAMILY SSF46785 12 108 1.17E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0138 950650fc0daec3c53e684fbbad8a64f7 116 Gene3D G3DSA:1.10.10.10 1 114 2.6E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0138 950650fc0daec3c53e684fbbad8a64f7 116 Pfam PF01638 HxlR-like helix-turn-helix 24 107 1.6E-33 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type TMO_0085 acc67d94048c012d358a02b66b301d66 329 Gene3D G3DSA:3.30.160.40 227 315 1.2E-22 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 PRINTS PR00151 Porphobilinogen deaminase signature 148 165 3.5E-43 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 PRINTS PR00151 Porphobilinogen deaminase signature 235 252 3.5E-43 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 PRINTS PR00151 Porphobilinogen deaminase signature 81 100 3.5E-43 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 PRINTS PR00151 Porphobilinogen deaminase signature 50 70 3.5E-43 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 PRINTS PR00151 Porphobilinogen deaminase signature 129 146 3.5E-43 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 Gene3D G3DSA:3.40.190.10 108 207 5.8E-81 T 14-10-2018 TMO_0085 acc67d94048c012d358a02b66b301d66 329 Gene3D G3DSA:3.40.190.10 7 215 5.8E-81 T 14-10-2018 TMO_0085 acc67d94048c012d358a02b66b301d66 329 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 308 36.446 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 301 9.1E-102 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 SUPERFAMILY SSF54782 225 314 7.59E-18 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 231 306 4.4E-14 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 217 4.2E-76 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 236 252 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0085 acc67d94048c012d358a02b66b301d66 329 SUPERFAMILY SSF53850 7 222 1.6E-76 T 14-10-2018 TMO_0085 acc67d94048c012d358a02b66b301d66 329 PIRSF PIRSF001438 1 320 4.4E-113 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_b0584 0c74950f50cd08593678667a1e4d7a1f 411 SMART SM00388 183 252 9.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0584 0c74950f50cd08593678667a1e4d7a1f 411 Gene3D G3DSA:1.10.287.130 150 250 3.5E-20 T 14-10-2018 TMO_b0584 0c74950f50cd08593678667a1e4d7a1f 411 Gene3D G3DSA:3.30.565.10 261 410 3.0E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0584 0c74950f50cd08593678667a1e4d7a1f 411 SUPERFAMILY SSF47384 178 250 8.24E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_b0584 0c74950f50cd08593678667a1e4d7a1f 411 Pfam PF00512 His Kinase A (phospho-acceptor) domain 184 251 4.8E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0584 0c74950f50cd08593678667a1e4d7a1f 411 SUPERFAMILY SSF55874 241 407 9.79E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0647 ce3ba5c98c38ca6c14db4cedaa2c3010 427 PIRSF PIRSF006066 3 427 6.4E-146 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_c0647 ce3ba5c98c38ca6c14db4cedaa2c3010 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 417 2.7E-110 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_c0647 ce3ba5c98c38ca6c14db4cedaa2c3010 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 19 423 1.5E-128 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_3523 8b2acc19b94d90425be7879a3bd9e926 233 Pfam PF00106 short chain dehydrogenase 8 192 1.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3523 8b2acc19b94d90425be7879a3bd9e926 233 Gene3D G3DSA:3.40.50.720 1 231 5.4E-54 T 14-10-2018 TMO_3523 8b2acc19b94d90425be7879a3bd9e926 233 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_3523 8b2acc19b94d90425be7879a3bd9e926 233 SUPERFAMILY SSF51735 1 231 1.33E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3523 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 6.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3523 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3523 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3523 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3523 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3523 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0912 3119ceaac37930f1542fc5ebced96334 401 SUPERFAMILY SSF51717 134 396 1.28E-87 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0912 3119ceaac37930f1542fc5ebced96334 401 Gene3D G3DSA:3.20.20.20 116 400 5.5E-98 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0912 3119ceaac37930f1542fc5ebced96334 401 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 174 187 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0912 3119ceaac37930f1542fc5ebced96334 401 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 140 155 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0912 3119ceaac37930f1542fc5ebced96334 401 Pfam PF00809 Pterin binding enzyme 141 381 1.6E-71 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0912 3119ceaac37930f1542fc5ebced96334 401 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 140 394 3.8E-87 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 TMO_0200 134c46d5c2116bf0b048dc3edaa8679f 468 SUPERFAMILY SSF55073 237 425 4.4E-57 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_0200 134c46d5c2116bf0b048dc3edaa8679f 468 SMART SM00044 193 405 1.3E-24 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_0200 134c46d5c2116bf0b048dc3edaa8679f 468 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 242 419 3.2E-34 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_0200 134c46d5c2116bf0b048dc3edaa8679f 468 Gene3D G3DSA:3.30.70.1230 230 435 4.4E-62 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_1662 c8a0009da11e5ee22245b4e476086413 532 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 305 356 1.7E-8 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TMO_1662 c8a0009da11e5ee22245b4e476086413 532 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 73 288 2.5E-24 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TMO_1662 c8a0009da11e5ee22245b4e476086413 532 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 30 61 1.1E-4 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TMO_1662 c8a0009da11e5ee22245b4e476086413 532 Gene3D G3DSA:1.10.189.10 346 520 9.5E-41 T 14-10-2018 TMO_1662 c8a0009da11e5ee22245b4e476086413 532 Gene3D G3DSA:3.30.1490.20 29 244 4.6E-73 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_1662 c8a0009da11e5ee22245b4e476086413 532 Pfam PF00391 PEP-utilising enzyme, mobile domain 425 504 1.4E-19 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_1662 c8a0009da11e5ee22245b4e476086413 532 Gene3D G3DSA:3.50.30.10 384 510 9.5E-41 T 14-10-2018 TMO_1662 c8a0009da11e5ee22245b4e476086413 532 Gene3D G3DSA:1.20.80.30 113 203 4.6E-73 T 14-10-2018 TMO_1662 c8a0009da11e5ee22245b4e476086413 532 SUPERFAMILY SSF52009 388 513 1.57E-27 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TMO_1662 c8a0009da11e5ee22245b4e476086413 532 SUPERFAMILY SSF56059 27 371 4.59E-105 T 14-10-2018 TMO_1662 c8a0009da11e5ee22245b4e476086413 532 Gene3D G3DSA:3.30.470.20 245 342 2.1E-32 T 14-10-2018 TMO_1662 c8a0009da11e5ee22245b4e476086413 532 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 451 462 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TMO_1321 6fc1df1b9771b87b2a81a032b14c91fb 255 Gene3D G3DSA:3.30.750.70 69 127 9.0E-7 T 14-10-2018 TMO_1321 6fc1df1b9771b87b2a81a032b14c91fb 255 Gene3D G3DSA:1.10.10.10 1 52 4.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1321 6fc1df1b9771b87b2a81a032b14c91fb 255 SUPERFAMILY SSF100950 71 230 9.63E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_1321 6fc1df1b9771b87b2a81a032b14c91fb 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 4.5E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_1321 6fc1df1b9771b87b2a81a032b14c91fb 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_1321 6fc1df1b9771b87b2a81a032b14c91fb 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_1321 6fc1df1b9771b87b2a81a032b14c91fb 255 SMART SM00420 6 58 1.1E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_1321 6fc1df1b9771b87b2a81a032b14c91fb 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 TMO_1321 6fc1df1b9771b87b2a81a032b14c91fb 255 Pfam PF00455 DeoR C terminal sensor domain 72 228 4.4E-40 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain TMO_1321 6fc1df1b9771b87b2a81a032b14c91fb 255 SUPERFAMILY SSF46785 3 65 2.28E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1321 6fc1df1b9771b87b2a81a032b14c91fb 255 SMART SM01134 70 230 2.2E-54 T 14-10-2018 TMO_3485 2ebacf746eabe2a993fc17d7d6129ca5 273 Pfam PF00149 Calcineurin-like phosphoesterase 2 197 2.0E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TMO_3485 2ebacf746eabe2a993fc17d7d6129ca5 273 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 255 36.683 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 TMO_3485 2ebacf746eabe2a993fc17d7d6129ca5 273 Gene3D G3DSA:3.60.21.40 1 239 1.9E-85 T 14-10-2018 TMO_3485 2ebacf746eabe2a993fc17d7d6129ca5 273 Gene3D G3DSA:3.30.750.180 105 231 1.9E-85 T 14-10-2018 TMO_3485 2ebacf746eabe2a993fc17d7d6129ca5 273 SUPERFAMILY SSF56300 1 255 1.38E-55 T 14-10-2018 TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 94 108 3.3E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 219 239 3.3E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 174 196 3.3E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 347 358 3.3E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 SMART SM00839 185 419 2.7E-63 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 SUPERFAMILY SSF53223 10 185 3.84E-62 T 14-10-2018 TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 Gene3D G3DSA:3.40.50.10860 39 182 1.0E-56 T 14-10-2018 TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 PIRSF PIRSF000185 5 422 4.6E-150 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 183 419 8.9E-57 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 Gene3D G3DSA:3.40.50.720 183 421 4.2E-71 T 14-10-2018 TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 SUPERFAMILY SSF51735 183 419 3.36E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0186 918b6dc1952b0730f2f865b96177fc37 426 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 37 163 2.7E-49 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_2956 c6d877beb416b84b543fa83091203e7e 152 SMART SM00344 1 110 2.3E-46 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_2956 c6d877beb416b84b543fa83091203e7e 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site TMO_2956 c6d877beb416b84b543fa83091203e7e 152 SUPERFAMILY SSF54909 62 149 1.74E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_2956 c6d877beb416b84b543fa83091203e7e 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 7.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_2956 c6d877beb416b84b543fa83091203e7e 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 7.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_2956 c6d877beb416b84b543fa83091203e7e 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 7.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_2956 c6d877beb416b84b543fa83091203e7e 152 Gene3D G3DSA:1.10.10.10 2 52 7.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2956 c6d877beb416b84b543fa83091203e7e 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 2.4E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_2956 c6d877beb416b84b543fa83091203e7e 152 Gene3D G3DSA:3.30.70.920 54 138 7.9E-27 T 14-10-2018 TMO_2956 c6d877beb416b84b543fa83091203e7e 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.8E-18 T 14-10-2018 TMO_2956 c6d877beb416b84b543fa83091203e7e 152 SUPERFAMILY SSF46785 1 60 2.21E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 Gene3D G3DSA:1.10.150.20 751 809 1.4E-21 T 14-10-2018 TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 SUPERFAMILY SSF47781 723 811 1.97E-22 T 14-10-2018 IPR010994 RuvA domain 2-like TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 Pfam PF02151 UvrB/uvrC motif 401 428 9.6E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 SUPERFAMILY SSF46600 383 435 5.23E-11 T 14-10-2018 IPR036876 UVR domain superfamily TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 Pfam PF01541 GIY-YIG catalytic domain 211 284 1.1E-5 T 14-10-2018 IPR000305 GIY-YIG endonuclease TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 202 789 1.1E-159 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 Hamap MF_00203 UvrABC system protein C [uvrC]. 196 808 27.0 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 Gene3D G3DSA:3.40.1440.10 197 294 4.7E-30 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 Pfam PF12826 Helix-hairpin-helix motif 762 811 1.4E-7 T 14-10-2018 TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 SUPERFAMILY SSF82771 209 292 1.7E-19 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 Gene3D G3DSA:3.30.420.340 567 750 2.0E-41 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 SMART SM00278 789 808 120.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 SMART SM00278 757 776 0.36 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 SMART SM00465 209 290 1.2E-16 T 14-10-2018 IPR000305 GIY-YIG endonuclease TMO_c0130 803670421bf5ce39df2c87953bab9e0e 813 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 575 742 6.8E-44 T 14-10-2018 IPR001162 UvrC family homology region TMO_c0408 a221eb024c9f6c0b6d4bfad181af8af4 502 Hamap MF_01932 AMP nucleosidase [amn]. 23 502 61.132 T 14-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 TMO_c0408 a221eb024c9f6c0b6d4bfad181af8af4 502 SUPERFAMILY SSF53167 29 502 6.06E-153 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TMO_c0408 a221eb024c9f6c0b6d4bfad181af8af4 502 Pfam PF01048 Phosphorylase superfamily 288 447 1.5E-11 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TMO_c0408 a221eb024c9f6c0b6d4bfad181af8af4 502 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 31 502 2.1E-204 T 14-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 TMO_c0408 a221eb024c9f6c0b6d4bfad181af8af4 502 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 32 184 1.6E-52 T 14-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 TMO_c0408 a221eb024c9f6c0b6d4bfad181af8af4 502 Gene3D G3DSA:3.30.1730.10 26 190 1.4E-47 T 14-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 TMO_c0408 a221eb024c9f6c0b6d4bfad181af8af4 502 Gene3D G3DSA:3.40.50.1580 191 502 2.1E-97 T 14-10-2018 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 15 649 1.4E-226 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 SUPERFAMILY SSF56719 416 650 1.31E-76 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 Gene3D G3DSA:3.30.565.10 14 220 1.2E-71 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 508 524 1.6E-61 T 14-10-2018 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 46 61 1.6E-61 T 14-10-2018 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 442 456 1.6E-61 T 14-10-2018 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 526 543 1.6E-61 T 14-10-2018 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 546 558 1.6E-61 T 14-10-2018 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 81 94 1.6E-61 T 14-10-2018 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 588 604 1.6E-61 T 14-10-2018 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 125 139 1.6E-61 T 14-10-2018 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 288 301 1.6E-61 T 14-10-2018 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 SUPERFAMILY SSF55874 17 218 1.83E-58 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 SUPERFAMILY SSF54211 241 413 1.44E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 187 4.6E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 SMART SM00433 46 651 2.8E-267 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 Pfam PF00204 DNA gyrase B 241 412 4.6E-40 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 Gene3D G3DSA:3.30.230.10 241 417 3.1E-43 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 SMART SM00387 42 188 4.9E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 584 647 2.6E-23 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 ProSitePatterns PS00177 DNA topoisomerase II signature. 444 452 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 Pfam PF01751 Toprim domain 441 547 3.3E-16 T 14-10-2018 IPR006171 TOPRIM domain TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 Gene3D G3DSA:3.40.50.670 421 658 6.8E-85 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 383 397 1.6E-13 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 492 501 1.6E-13 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 17 27 1.6E-13 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 397 417 1.6E-13 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 335 351 1.6E-13 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 609 621 1.6E-13 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_1996 29e04692eafbe758db5089ad7f673a1e 659 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 14 655 41.226 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_2600 60cbf7f8ace807a1fb23d7a50f6e7935 510 Gene3D G3DSA:3.90.226.10 1 256 2.2E-96 T 14-10-2018 TMO_2600 60cbf7f8ace807a1fb23d7a50f6e7935 510 SUPERFAMILY SSF52096 251 510 4.39E-93 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_2600 60cbf7f8ace807a1fb23d7a50f6e7935 510 SUPERFAMILY SSF52096 2 254 1.2E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_2600 60cbf7f8ace807a1fb23d7a50f6e7935 510 Gene3D G3DSA:3.90.226.10 258 510 1.6E-98 T 14-10-2018 TMO_2600 60cbf7f8ace807a1fb23d7a50f6e7935 510 Pfam PF01039 Carboxyl transferase domain 27 508 3.6E-202 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 TMO_2703 1c746627eac80d507d7040f86b26dd4c 181 SUPERFAMILY SSF88659 102 173 2.43E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_2703 1c746627eac80d507d7040f86b26dd4c 181 Pfam PF04542 Sigma-70 region 2 17 84 1.6E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_2703 1c746627eac80d507d7040f86b26dd4c 181 Gene3D G3DSA:1.10.10.10 100 174 1.1E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2703 1c746627eac80d507d7040f86b26dd4c 181 Pfam PF08281 Sigma-70, region 4 118 166 2.6E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_2703 1c746627eac80d507d7040f86b26dd4c 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 170 4.4E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_2703 1c746627eac80d507d7040f86b26dd4c 181 Gene3D G3DSA:1.10.1740.10 5 86 2.4E-9 T 14-10-2018 TMO_2703 1c746627eac80d507d7040f86b26dd4c 181 SUPERFAMILY SSF88946 16 100 2.0E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 SUPERFAMILY SSF55681 1 257 4.31E-124 T 14-10-2018 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 261 52.159 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 Gene3D G3DSA:3.30.930.10 1 184 4.2E-96 T 14-10-2018 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 1 257 1.0E-137 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 Gene3D G3DSA:1.20.58.180 185 260 3.6E-33 T 14-10-2018 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 86 110 7.8E-68 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 221 237 7.8E-68 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 75 7.8E-68 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 112 132 7.8E-68 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 135 150 7.8E-68 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 34 49 7.8E-68 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0796 897518009d3f1d88ed3899d400b20096 268 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 256 1.1E-132 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_2790 559d450ff500e33229e6953a89cfe5b4 379 Pfam PF01571 Aminomethyltransferase folate-binding domain 21 265 2.4E-86 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain TMO_2790 559d450ff500e33229e6953a89cfe5b4 379 Gene3D G3DSA:3.30.70.1400 67 151 2.8E-82 T 14-10-2018 TMO_2790 559d450ff500e33229e6953a89cfe5b4 379 SUPERFAMILY SSF101790 286 379 1.96E-24 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal TMO_2790 559d450ff500e33229e6953a89cfe5b4 379 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 17 373 2.3E-102 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TMO_2790 559d450ff500e33229e6953a89cfe5b4 379 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 277 369 2.0E-22 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TMO_2790 559d450ff500e33229e6953a89cfe5b4 379 PIRSF PIRSF006487 5 379 2.4E-79 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TMO_2790 559d450ff500e33229e6953a89cfe5b4 379 SUPERFAMILY SSF103025 15 292 2.04E-89 T 14-10-2018 TMO_2790 559d450ff500e33229e6953a89cfe5b4 379 Gene3D G3DSA:4.10.1250.10 244 288 6.9E-18 T 14-10-2018 TMO_2790 559d450ff500e33229e6953a89cfe5b4 379 Gene3D G3DSA:3.30.1360.120 20 243 2.8E-82 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TMO_2790 559d450ff500e33229e6953a89cfe5b4 379 Gene3D G3DSA:2.40.30.110 291 368 2.8E-26 T 14-10-2018 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 Hamap MF_00054_B Elongation factor G [fusA]. 6 691 112.512 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 SMART SM00838 600 687 1.4E-55 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 Pfam PF03144 Elongation factor Tu domain 2 324 391 1.5E-13 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 Gene3D G3DSA:3.30.230.10 484 687 5.7E-88 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 SUPERFAMILY SSF54980 402 480 1.26E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 Gene3D G3DSA:3.30.70.240 604 674 5.7E-88 T 14-10-2018 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 SUPERFAMILY SSF54980 603 689 7.67E-31 T 14-10-2018 IPR035647 EF-G domain III/V-like TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 SMART SM00889 480 598 2.1E-60 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 Pfam PF14492 Elongation Factor G, domain II 404 478 3.5E-34 T 14-10-2018 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 SUPERFAMILY SSF54211 479 599 4.3E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 SUPERFAMILY SSF50447 264 404 6.82E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 Pfam PF00679 Elongation factor G C-terminus 600 686 1.1E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 Gene3D G3DSA:3.40.50.300 1 291 8.3E-115 T 14-10-2018 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 Pfam PF00009 Elongation factor Tu GTP binding domain 10 281 4.6E-71 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 179 1.4E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 Pfam PF03764 Elongation factor G, domain IV 479 597 6.6E-42 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 Gene3D G3DSA:3.30.70.870 406 483 2.2E-33 T 14-10-2018 TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 SUPERFAMILY SSF52540 6 281 4.55E-110 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2635 dc7cd3a164bd324468fb92f0ea37807d 693 Gene3D G3DSA:2.40.30.10 292 405 2.6E-42 T 14-10-2018 TMO_d0060 0fb04a71671a7f5aa88b65f33ac55e1d 300 SUPERFAMILY SSF117892 54 191 4.84E-27 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily TMO_d0060 0fb04a71671a7f5aa88b65f33ac55e1d 300 SMART SM00244 22 184 9.7E-38 T 14-10-2018 IPR001107 Band 7 domain TMO_d0060 0fb04a71671a7f5aa88b65f33ac55e1d 300 Gene3D G3DSA:3.30.479.30 51 186 2.9E-25 T 14-10-2018 TMO_d0060 0fb04a71671a7f5aa88b65f33ac55e1d 300 PIRSF PIRSF005651 2 292 7.3E-98 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 TMO_d0060 0fb04a71671a7f5aa88b65f33ac55e1d 300 TIGRFAM TIGR01932 hflC: HflC protein 137 283 1.7E-42 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 TMO_d0060 0fb04a71671a7f5aa88b65f33ac55e1d 300 Pfam PF01145 SPFH domain / Band 7 family 26 199 9.3E-32 T 14-10-2018 IPR001107 Band 7 domain TMO_1285 af33ef4b505c444220797e80c26cf17f 413 Gene3D G3DSA:1.10.12.10 357 411 8.1E-10 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_1285 af33ef4b505c444220797e80c26cf17f 413 SMART SM00347 24 124 4.8E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1285 af33ef4b505c444220797e80c26cf17f 413 Gene3D G3DSA:1.10.10.10 1 140 5.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1285 af33ef4b505c444220797e80c26cf17f 413 SUPERFAMILY SSF46785 5 136 1.93E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1285 af33ef4b505c444220797e80c26cf17f 413 Gene3D G3DSA:3.90.226.10 159 356 2.3E-51 T 14-10-2018 TMO_1285 af33ef4b505c444220797e80c26cf17f 413 SUPERFAMILY SSF52096 156 410 2.4E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_1285 af33ef4b505c444220797e80c26cf17f 413 Pfam PF00378 Enoyl-CoA hydratase/isomerase 167 410 1.7E-45 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_1285 af33ef4b505c444220797e80c26cf17f 413 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 97 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_1285 af33ef4b505c444220797e80c26cf17f 413 Pfam PF13463 Winged helix DNA-binding domain 31 97 4.0E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1285 af33ef4b505c444220797e80c26cf17f 413 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1285 af33ef4b505c444220797e80c26cf17f 413 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1285 af33ef4b505c444220797e80c26cf17f 413 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0252 2cbdda0790963a7d8c5c31be3ea5730f 310 SUPERFAMILY SSF103481 209 301 6.15E-13 T 14-10-2018 TMO_c0252 2cbdda0790963a7d8c5c31be3ea5730f 310 SUPERFAMILY SSF103481 57 150 2.22E-14 T 14-10-2018 TMO_c0252 2cbdda0790963a7d8c5c31be3ea5730f 310 Pfam PF00892 EamA-like transporter family 22 147 1.4E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_c0252 2cbdda0790963a7d8c5c31be3ea5730f 310 Pfam PF00892 EamA-like transporter family 160 297 2.3E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3560 b0623c635c041154c2becc29f644e776 268 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 23 267 37.267 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 TMO_3560 b0623c635c041154c2becc29f644e776 268 SUPERFAMILY SSF53335 27 261 9.82E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_3560 b0623c635c041154c2becc29f644e776 268 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 43 58 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 TMO_3560 b0623c635c041154c2becc29f644e776 268 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 175 189 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 TMO_3560 b0623c635c041154c2becc29f644e776 268 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 32 266 8.6E-77 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 TMO_3560 b0623c635c041154c2becc29f644e776 268 Gene3D G3DSA:3.40.50.150 38 268 3.9E-73 T 14-10-2018 TMO_3560 b0623c635c041154c2becc29f644e776 268 Pfam PF01209 ubiE/COQ5 methyltransferase family 28 266 1.8E-84 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 SMART SM00836 452 580 1.1E-55 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 SUPERFAMILY SSF47323 446 580 1.24E-31 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 SMART SM01016 5 94 6.8E-35 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Gene3D G3DSA:3.30.1360.70 6 111 8.6E-24 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Pfam PF05746 DALR anticodon binding domain 452 580 1.0E-29 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Gene3D G3DSA:3.40.50.620 123 446 4.9E-140 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 29 579 8.6E-107 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 SUPERFAMILY SSF55190 3 114 6.02E-24 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 SUPERFAMILY SSF52374 119 463 3.94E-82 T 14-10-2018 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 580 23.801 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Pfam PF00750 tRNA synthetases class I (R) 103 183 1.1E-10 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Gene3D G3DSA:1.10.730.10 447 577 4.9E-140 T 14-10-2018 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 15 94 9.2E-22 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 162 175 1.7E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 138 154 1.7E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 321 342 1.7E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 123 138 1.7E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TMO_1508 f22116d1c552ad8ec13b9c8cfd7d1e96 581 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 133 142 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_c0809 70dee7183bd33c02274a8e51c690b0ef 236 Pfam PF13649 Methyltransferase domain 58 151 1.2E-14 T 14-10-2018 TMO_c0809 70dee7183bd33c02274a8e51c690b0ef 236 SUPERFAMILY SSF53335 23 234 2.19E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0809 70dee7183bd33c02274a8e51c690b0ef 236 Gene3D G3DSA:3.40.50.150 18 236 1.9E-39 T 14-10-2018 TMO_1595 d200dad17494ae288446572da06da64f 266 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 32 240 4.4E-47 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TMO_1595 d200dad17494ae288446572da06da64f 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 118 130 1.1E-24 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TMO_1595 d200dad17494ae288446572da06da64f 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 197 216 1.1E-24 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TMO_1595 d200dad17494ae288446572da06da64f 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 48 64 1.1E-24 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TMO_1595 d200dad17494ae288446572da06da64f 266 Pfam PF00717 Peptidase S24-like 55 141 1.6E-19 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TMO_1595 d200dad17494ae288446572da06da64f 266 Gene3D G3DSA:2.170.230.10 129 196 3.7E-59 T 14-10-2018 TMO_1595 d200dad17494ae288446572da06da64f 266 SUPERFAMILY SSF51306 46 263 1.36E-61 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TMO_1595 d200dad17494ae288446572da06da64f 266 Gene3D G3DSA:2.10.109.10 46 239 3.7E-59 T 14-10-2018 TMO_1595 d200dad17494ae288446572da06da64f 266 ProSitePatterns PS00501 Signal peptidases I serine active site. 57 64 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 TMO_1595 d200dad17494ae288446572da06da64f 266 ProSitePatterns PS00760 Signal peptidases I lysine active site. 120 132 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 TMO_2269 a2cf9e4a04cde0d056a7ca055d492e9b 174 Pfam PF08281 Sigma-70, region 4 113 160 2.2E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_2269 a2cf9e4a04cde0d056a7ca055d492e9b 174 SUPERFAMILY SSF88946 6 84 1.57E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_2269 a2cf9e4a04cde0d056a7ca055d492e9b 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 165 3.2E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_2269 a2cf9e4a04cde0d056a7ca055d492e9b 174 Gene3D G3DSA:1.10.1740.10 6 82 5.2E-9 T 14-10-2018 TMO_2269 a2cf9e4a04cde0d056a7ca055d492e9b 174 Pfam PF04542 Sigma-70 region 2 10 79 3.0E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_2269 a2cf9e4a04cde0d056a7ca055d492e9b 174 Gene3D G3DSA:1.10.10.10 96 171 3.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2269 a2cf9e4a04cde0d056a7ca055d492e9b 174 SUPERFAMILY SSF88659 88 170 6.73E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_0405 7119bfd8fc7f3645c4943b348239c111 157 Gene3D G3DSA:3.40.1350.10 13 157 6.8E-52 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TMO_0405 7119bfd8fc7f3645c4943b348239c111 157 PIRSF PIRSF031796 1 154 1.7E-49 T 14-10-2018 IPR009394 DNA repair protein MmcB-like TMO_0405 7119bfd8fc7f3645c4943b348239c111 157 Pfam PF06319 DNA repair protein MmcB-like 11 150 5.5E-51 T 14-10-2018 IPR009394 DNA repair protein MmcB-like TMO_2294 fe9f8972e916891fd3f40faae4291a8b 545 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 6 527 1.2E-193 T 14-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 TMO_2294 fe9f8972e916891fd3f40faae4291a8b 545 Gene3D G3DSA:3.30.160.270 402 523 4.7E-7 T 14-10-2018 TMO_2294 fe9f8972e916891fd3f40faae4291a8b 545 Pfam PF08502 LeuA allosteric (dimerisation) domain 378 521 8.4E-26 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_2294 fe9f8972e916891fd3f40faae4291a8b 545 Gene3D G3DSA:3.20.20.70 5 327 3.4E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2294 fe9f8972e916891fd3f40faae4291a8b 545 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 203 216 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_2294 fe9f8972e916891fd3f40faae4291a8b 545 SUPERFAMILY SSF110921 420 521 4.45E-19 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_2294 fe9f8972e916891fd3f40faae4291a8b 545 Pfam PF00682 HMGL-like 6 269 1.5E-45 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_2294 fe9f8972e916891fd3f40faae4291a8b 545 SMART SM00917 376 525 4.3E-28 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_2294 fe9f8972e916891fd3f40faae4291a8b 545 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_2294 fe9f8972e916891fd3f40faae4291a8b 545 SUPERFAMILY SSF51569 3 294 1.37E-79 T 14-10-2018 TMO_0635 839af696d80e77d857a0547cf81ae39e 439 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 323 4.8E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_d0052 52a749802aee2bf548bd5d74538c419a 296 Gene3D G3DSA:3.40.50.1980 31 119 2.0E-20 T 14-10-2018 TMO_d0052 52a749802aee2bf548bd5d74538c419a 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 83 98 2.0E-11 T 14-10-2018 TMO_d0052 52a749802aee2bf548bd5d74538c419a 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 52 70 2.0E-11 T 14-10-2018 TMO_d0052 52a749802aee2bf548bd5d74538c419a 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 206 224 2.0E-11 T 14-10-2018 TMO_d0052 52a749802aee2bf548bd5d74538c419a 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 182 197 2.0E-11 T 14-10-2018 TMO_d0052 52a749802aee2bf548bd5d74538c419a 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 271 284 2.0E-11 T 14-10-2018 TMO_d0052 52a749802aee2bf548bd5d74538c419a 296 SUPERFAMILY SSF53807 33 290 1.06E-39 T 14-10-2018 TMO_d0052 52a749802aee2bf548bd5d74538c419a 296 Gene3D G3DSA:3.40.50.1980 123 294 1.5E-40 T 14-10-2018 TMO_d0052 52a749802aee2bf548bd5d74538c419a 296 Pfam PF01497 Periplasmic binding protein 35 269 6.0E-15 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain TMO_0541 1a583e8528934fe4e0d730adabef1bcf 330 SMART SM00829 16 326 9.5E-14 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_0541 1a583e8528934fe4e0d730adabef1bcf 330 SUPERFAMILY SSF50129 6 155 1.51E-36 T 14-10-2018 IPR011032 GroES-like superfamily TMO_0541 1a583e8528934fe4e0d730adabef1bcf 330 Pfam PF00107 Zinc-binding dehydrogenase 157 257 3.6E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_0541 1a583e8528934fe4e0d730adabef1bcf 330 Gene3D G3DSA:3.40.50.720 129 273 1.1E-85 T 14-10-2018 TMO_0541 1a583e8528934fe4e0d730adabef1bcf 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 93 1.3E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_0541 1a583e8528934fe4e0d730adabef1bcf 330 SUPERFAMILY SSF51735 121 259 1.32E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0541 1a583e8528934fe4e0d730adabef1bcf 330 Gene3D G3DSA:3.90.180.10 16 321 1.1E-85 T 14-10-2018 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Gene3D G3DSA:3.30.559.30 234 485 4.7E-135 T 14-10-2018 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 SUPERFAMILY SSF53474 1885 2152 1.72E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Gene3D G3DSA:3.40.50.12780 515 900 2.9E-108 T 14-10-2018 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 SUPERFAMILY SSF53335 1377 1533 5.63E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Gene3D G3DSA:3.40.50.150 1388 1557 5.0E-29 T 14-10-2018 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1825 1840 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 SMART SM00823 Phosphopantetheine attachment site 1801 1870 9.7E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 SUPERFAMILY SSF47336 1796 1866 3.01E-14 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 SUPERFAMILY SSF52777 237 485 2.52E-54 T 14-10-2018 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Pfam PF00975 Thioesterase domain 1899 2151 6.8E-34 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Gene3D G3DSA:3.30.300.30 1650 1789 6.7E-12 T 14-10-2018 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 SUPERFAMILY SSF52777 57 230 3.45E-47 T 14-10-2018 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Gene3D G3DSA:1.10.1200.10 1790 1872 6.4E-21 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 SUPERFAMILY SSF53335 983 1211 5.16E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Pfam PF00668 Condensation domain 56 494 5.7E-86 T 14-10-2018 IPR001242 Condensation domain TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Gene3D G3DSA:3.40.50.150 973 1110 4.2E-30 T 14-10-2018 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 ProSitePatterns PS00455 Putative AMP-binding domain signature. 657 668 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Pfam PF00550 Phosphopantetheine attachment site 1803 1865 1.5E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Pfam PF00501 AMP-binding enzyme 527 905 3.7E-77 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 542 930 5.0E-111 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 SMART SM00824 Thioesterase 1901 2153 4.7E-5 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Gene3D G3DSA:3.40.50.1820 1887 2159 1.8E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Gene3D G3DSA:3.30.559.10 56 423 4.7E-135 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 SUPERFAMILY SSF56801 515 1779 1.49E-116 T 14-10-2018 TMO_c0611 d130660d115a13324008ac1c87d6d8cd 2163 Pfam PF08242 Methyltransferase domain 1419 1513 2.4E-9 T 14-10-2018 IPR013217 Methyltransferase type 12 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 SUPERFAMILY SSF55008 86 159 2.23E-11 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 634 791 5.4E-29 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 520 9.8E-30 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 243 810 7.2E-142 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 Pfam PF00122 E1-E2 ATPase 317 487 3.3E-40 T 14-10-2018 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 Gene3D G3DSA:2.70.150.20 293 410 5.0E-23 T 14-10-2018 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 Gene3D G3DSA:3.40.1110.10 518 640 1.2E-57 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 SUPERFAMILY SSF81653 317 406 1.14E-15 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 224 810 5.7E-133 T 14-10-2018 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 Gene3D G3DSA:3.40.50.1000 488 759 1.2E-57 T 14-10-2018 IPR023214 HAD superfamily TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 Pfam PF00403 Heavy-metal-associated domain 92 138 6.4E-5 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 721 3.2E-31 T 14-10-2018 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 731 743 7.5E-17 T 14-10-2018 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 727 7.5E-17 T 14-10-2018 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 665 7.5E-17 T 14-10-2018 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 7.5E-17 T 14-10-2018 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 644 7.5E-17 T 14-10-2018 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 356 370 7.5E-17 T 14-10-2018 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 SUPERFAMILY SSF56784 506 807 4.37E-41 T 14-10-2018 IPR036412 HAD-like superfamily TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 13 64 6.8E-7 T 14-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 SUPERFAMILY SSF81665 251 779 7.06E-14 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TMO_c0919 b33043503dc536b185edc6fcc817a24e 816 SUPERFAMILY SSF81660 509 596 8.17E-8 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 13 58 1.2E-23 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 PIRSF PIRSF000006 2 289 5.5E-102 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 Gene3D G3DSA:1.10.760.10 174 262 2.3E-67 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 208 282 3.3E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 111 193 2.5E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 Gene3D G3DSA:1.20.58.1490 1 72 2.6E-19 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 8 289 2.4E-100 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 Gene3D G3DSA:1.10.760.10 83 285 2.3E-67 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 PRINTS PR00605 Class IC cytochrome C signature 120 131 8.6E-8 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 PRINTS PR00605 Class IC cytochrome C signature 260 282 8.6E-8 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 SUPERFAMILY SSF46626 203 288 2.04E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0922 f33e1c1c42c3a4de802e30c45304fe8b 289 SUPERFAMILY SSF46626 31 199 1.48E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_1733 652e57a263ae69651cf7c833a45e271f 219 Hamap MF_01389 Urease accessory protein UreG [ureG]. 1 197 45.732 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 TMO_1733 652e57a263ae69651cf7c833a45e271f 219 Gene3D G3DSA:3.40.50.300 1 193 7.1E-49 T 14-10-2018 TMO_1733 652e57a263ae69651cf7c833a45e271f 219 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 173 1.7E-37 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_1733 652e57a263ae69651cf7c833a45e271f 219 SUPERFAMILY SSF52540 1 192 3.32E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1733 652e57a263ae69651cf7c833a45e271f 219 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 1 188 1.2E-103 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 TMO_1733 652e57a263ae69651cf7c833a45e271f 219 PIRSF PIRSF005624 1 200 1.9E-48 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 TMO_2597 afe16743a41cb0ba3b9691ec569c5abd 479 Gene3D G3DSA:1.10.45.10 438 478 5.7E-14 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 TMO_2597 afe16743a41cb0ba3b9691ec569c5abd 479 Pfam PF01565 FAD binding domain 51 186 2.0E-33 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TMO_2597 afe16743a41cb0ba3b9691ec569c5abd 479 SUPERFAMILY SSF56176 13 224 3.6E-69 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_2597 afe16743a41cb0ba3b9691ec569c5abd 479 Gene3D G3DSA:3.30.70.2190 227 348 3.5E-30 T 14-10-2018 TMO_2597 afe16743a41cb0ba3b9691ec569c5abd 479 Gene3D G3DSA:3.30.43.10 6 102 3.5E-24 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 TMO_2597 afe16743a41cb0ba3b9691ec569c5abd 479 SUPERFAMILY SSF55103 228 479 4.09E-50 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TMO_2597 afe16743a41cb0ba3b9691ec569c5abd 479 Pfam PF02913 FAD linked oxidases, C-terminal domain 229 476 2.4E-46 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TMO_2597 afe16743a41cb0ba3b9691ec569c5abd 479 Gene3D G3DSA:3.30.70.2740 352 437 1.4E-20 T 14-10-2018 TMO_2597 afe16743a41cb0ba3b9691ec569c5abd 479 Gene3D G3DSA:3.30.465.10 104 225 5.7E-44 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TMO_0830 5fb0c7765472cb7eb2a7024414591ba2 307 Gene3D G3DSA:3.60.130.10 20 307 2.4E-77 T 14-10-2018 TMO_0830 5fb0c7765472cb7eb2a7024414591ba2 307 SUPERFAMILY SSF51197 25 303 3.21E-75 T 14-10-2018 TMO_0830 5fb0c7765472cb7eb2a7024414591ba2 307 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 27 296 4.3E-53 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 TMO_b0380 e879057c92064192e2ef119ee12e0e47 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 280 7.6E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0380 e879057c92064192e2ef119ee12e0e47 285 SUPERFAMILY SSF161098 76 262 7.19E-29 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0380 e879057c92064192e2ef119ee12e0e47 285 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 13 58 1.0E-5 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_b0380 e879057c92064192e2ef119ee12e0e47 285 Gene3D G3DSA:1.10.3720.10 72 277 1.0E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0590 3367da5438f96d607b761d277fcd460f 678 Gene3D G3DSA:3.40.50.1110 67 275 9.7E-27 T 14-10-2018 IPR036514 SGNH hydrolase superfamily TMO_a0590 3367da5438f96d607b761d277fcd460f 678 SUPERFAMILY SSF56784 279 398 1.11E-5 T 14-10-2018 IPR036412 HAD-like superfamily TMO_a0590 3367da5438f96d607b761d277fcd460f 678 TIGRFAM TIGR01686 FkbH: FkbH domain 277 627 5.1E-70 T 14-10-2018 IPR010037 FkbH domain TMO_a0590 3367da5438f96d607b761d277fcd460f 678 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 280 402 4.6E-14 T 14-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC TMO_a0590 3367da5438f96d607b761d277fcd460f 678 Gene3D G3DSA:3.40.50.1000 277 443 3.0E-49 T 14-10-2018 IPR023214 HAD superfamily TMO_2549 02c798513d95589740667840f38f0178 922 SUPERFAMILY SSF56801 29 555 1.57E-109 T 14-10-2018 TMO_2549 02c798513d95589740667840f38f0178 922 Gene3D G3DSA:3.40.50.1820 650 918 1.7E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2549 02c798513d95589740667840f38f0178 922 SUPERFAMILY SSF47336 577 650 4.71E-9 T 14-10-2018 IPR036736 ACP-like superfamily TMO_2549 02c798513d95589740667840f38f0178 922 SUPERFAMILY SSF53474 653 910 4.78E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2549 02c798513d95589740667840f38f0178 922 Gene3D G3DSA:3.40.50.12780 29 451 7.9E-84 T 14-10-2018 TMO_2549 02c798513d95589740667840f38f0178 922 Gene3D G3DSA:1.10.1200.10 573 649 5.4E-10 T 14-10-2018 IPR036736 ACP-like superfamily TMO_2549 02c798513d95589740667840f38f0178 922 ProSitePatterns PS00455 Putative AMP-binding domain signature. 199 210 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_2549 02c798513d95589740667840f38f0178 922 Gene3D G3DSA:3.30.300.30 454 555 3.7E-26 T 14-10-2018 TMO_2549 02c798513d95589740667840f38f0178 922 Pfam PF00550 Phosphopantetheine attachment site 582 642 1.8E-5 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_2549 02c798513d95589740667840f38f0178 922 Pfam PF00501 AMP-binding enzyme 38 459 3.1E-62 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_2549 02c798513d95589740667840f38f0178 922 SMART SM00823 Phosphopantetheine attachment site 579 648 0.0032 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_2549 02c798513d95589740667840f38f0178 922 Pfam PF13193 AMP-binding enzyme C-terminal domain 467 542 9.5E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_3470 cb0647d1b96fd2b256aa11a5406cc70c 203 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 13 197 3.7E-52 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TMO_3470 cb0647d1b96fd2b256aa11a5406cc70c 203 Gene3D G3DSA:3.90.950.10 9 200 9.5E-68 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_3470 cb0647d1b96fd2b256aa11a5406cc70c 203 Hamap MF_01405 dITP/XTP pyrophosphatase. 11 201 46.533 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 TMO_3470 cb0647d1b96fd2b256aa11a5406cc70c 203 SUPERFAMILY SSF52972 6 199 4.97E-67 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_3470 cb0647d1b96fd2b256aa11a5406cc70c 203 Pfam PF01725 Ham1 family 13 196 6.6E-53 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TMO_0381 b9d5c6d558145887edc01fbe3ebbc76d 298 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 9 292 37.461 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TMO_0381 b9d5c6d558145887edc01fbe3ebbc76d 298 Gene3D G3DSA:3.40.50.150 92 297 2.7E-57 T 14-10-2018 TMO_0381 b9d5c6d558145887edc01fbe3ebbc76d 298 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 269 3.2E-47 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 TMO_0381 b9d5c6d558145887edc01fbe3ebbc76d 298 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 197 203 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TMO_0381 b9d5c6d558145887edc01fbe3ebbc76d 298 Gene3D G3DSA:1.10.8.10 10 91 1.3E-15 T 14-10-2018 TMO_0381 b9d5c6d558145887edc01fbe3ebbc76d 298 SUPERFAMILY SSF53335 28 275 3.92E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0381 b9d5c6d558145887edc01fbe3ebbc76d 298 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 31 288 5.4E-73 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TMO_0381 b9d5c6d558145887edc01fbe3ebbc76d 298 Pfam PF05175 Methyltransferase small domain 126 204 2.9E-11 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 TMO_2772 317bb1d265195243a1698538923c1248 281 Gene3D G3DSA:3.30.950.10 111 231 1.2E-43 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TMO_2772 317bb1d265195243a1698538923c1248 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 5.2E-42 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TMO_2772 317bb1d265195243a1698538923c1248 281 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2772 317bb1d265195243a1698538923c1248 281 Gene3D G3DSA:3.40.1010.10 1 110 2.8E-28 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TMO_2772 317bb1d265195243a1698538923c1248 281 SUPERFAMILY SSF53790 2 247 5.89E-64 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TMO_2772 317bb1d265195243a1698538923c1248 281 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 249 1.2E-97 T 14-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 TMO_1790 d3cda7ec56357d5d1bc2d9140c062321 152 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 142 9.6E-59 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1790 d3cda7ec56357d5d1bc2d9140c062321 152 PIRSF PIRSF002181 1 151 8.3E-52 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TMO_1790 d3cda7ec56357d5d1bc2d9140c062321 152 SUPERFAMILY SSF52161 1 140 3.27E-57 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TMO_1790 d3cda7ec56357d5d1bc2d9140c062321 152 Pfam PF00572 Ribosomal protein L13 14 139 2.9E-52 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TMO_1790 d3cda7ec56357d5d1bc2d9140c062321 152 Gene3D G3DSA:3.90.1180.10 1 143 4.6E-58 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TMO_1790 d3cda7ec56357d5d1bc2d9140c062321 152 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 142 29.04 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TMO_1790 d3cda7ec56357d5d1bc2d9140c062321 152 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 TMO_b0587 540ea5354a3e09c36c134d18dd7cf373 300 Gene3D G3DSA:1.10.10.2830 115 228 4.4E-22 T 14-10-2018 TMO_b0587 540ea5354a3e09c36c134d18dd7cf373 300 Gene3D G3DSA:3.90.1530.30 50 114 2.2E-20 T 14-10-2018 TMO_b0587 540ea5354a3e09c36c134d18dd7cf373 300 SMART SM00470 37 126 2.0E-23 T 14-10-2018 IPR003115 ParB/Sulfiredoxin TMO_b0587 540ea5354a3e09c36c134d18dd7cf373 300 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 184 2.1E-40 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 TMO_b0587 540ea5354a3e09c36c134d18dd7cf373 300 Pfam PF02195 ParB-like nuclease domain 38 120 8.9E-21 T 14-10-2018 IPR003115 ParB/Sulfiredoxin TMO_b0587 540ea5354a3e09c36c134d18dd7cf373 300 SUPERFAMILY SSF110849 38 163 4.45E-23 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TMO_0839 57038567b1958c3d2e091d0e9c8ab2cd 576 Gene3D G3DSA:3.40.720.10 246 527 6.5E-15 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TMO_0839 57038567b1958c3d2e091d0e9c8ab2cd 576 SUPERFAMILY SSF53649 303 496 2.43E-8 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TMO_1987 c8883fe7ae26f3ecf32eaf01b6d74391 502 Pfam PF05292 Malonyl-CoA decarboxylase C-terminal domain 216 473 1.8E-111 T 14-10-2018 IPR007956 Malonyl-CoA decarboxylase, C-terminal GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 TMO_1987 c8883fe7ae26f3ecf32eaf01b6d74391 502 Gene3D G3DSA:3.40.630.150 215 502 9.9E-111 T 14-10-2018 TMO_1987 c8883fe7ae26f3ecf32eaf01b6d74391 502 Pfam PF17408 Malonyl-CoA decarboxylase N-terminal domain 125 213 2.0E-17 T 14-10-2018 IPR035372 Malonyl-CoA decarboxylase, N-terminal KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 TMO_1987 c8883fe7ae26f3ecf32eaf01b6d74391 502 Gene3D G3DSA:1.20.140.90 74 213 2.7E-25 T 14-10-2018 IPR038351 Malonyl-CoA decarboxylase, N-terminal domain superfamily KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 TMO_c0228 7f780b80793406a16e7877d58ae15783 156 Pfam PF03061 Thioesterase superfamily 64 141 6.7E-9 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_c0228 7f780b80793406a16e7877d58ae15783 156 SUPERFAMILY SSF54637 26 149 1.25E-29 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_c0228 7f780b80793406a16e7877d58ae15783 156 Gene3D G3DSA:3.10.129.10 4 156 6.0E-34 T 14-10-2018 TMO_c0228 7f780b80793406a16e7877d58ae15783 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 34 151 1.5E-20 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_0584 c26c7503412c4aa71693eb20017aa46f 524 Pfam PF05036 Sporulation related domain 434 514 3.4E-7 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 TMO_0584 c26c7503412c4aa71693eb20017aa46f 524 Gene3D G3DSA:3.40.710.10 51 322 3.0E-82 T 14-10-2018 TMO_0584 c26c7503412c4aa71693eb20017aa46f 524 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 85 96 1.1E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_0584 c26c7503412c4aa71693eb20017aa46f 524 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 165 178 1.1E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_0584 c26c7503412c4aa71693eb20017aa46f 524 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 155 1.1E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_0584 c26c7503412c4aa71693eb20017aa46f 524 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 59 277 1.1E-62 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 TMO_0584 c26c7503412c4aa71693eb20017aa46f 524 SUPERFAMILY SSF56601 40 295 5.13E-71 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF52777 2609 2785 7.78E-44 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF56801 1512 2067 1.57E-140 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF47336 967 1038 1.83E-17 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF52777 1078 1278 7.23E-42 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1683 1694 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF00975 Thioesterase domain 3661 3765 2.2E-19 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.30.559.10 2609 2974 5.4E-107 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 ProSitePatterns PS00455 Putative AMP-binding domain signature. 608 619 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.30.559.30 1267 1521 4.7E-112 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF52777 36 207 1.67E-33 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 ProSitePatterns PS00012 Phosphopantetheine attachment site. 997 1012 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.30.559.10 2123 2300 2.5E-55 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF52777 2134 2334 5.45E-40 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.30.559.30 209 460 1.8E-106 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF52777 2790 3030 8.0E-41 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:1.10.1200.10 3559 3640 6.1E-21 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF52777 1270 1511 1.22E-46 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF13193 AMP-binding enzyme C-terminal domain 873 945 4.6E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF13193 AMP-binding enzyme C-terminal domain 3477 3545 3.3E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF13193 AMP-binding enzyme C-terminal domain 1956 2031 7.7E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2079 2094 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF52777 2322 2572 4.11E-27 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 502 889 1.0E-101 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1572 1972 5.3E-123 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3084 3493 4.7E-120 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF56801 469 985 4.71E-129 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3592 3607 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.30.559.30 2787 3030 5.4E-107 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:1.10.1200.10 2046 2122 1.3E-20 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.30.559.10 1087 1459 4.7E-112 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF00668 Condensation domain 2136 2571 4.6E-52 T 14-10-2018 IPR001242 Condensation domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF00668 Condensation domain 2603 2986 1.5E-58 T 14-10-2018 IPR001242 Condensation domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF00668 Condensation domain 32 451 4.9E-63 T 14-10-2018 IPR001242 Condensation domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF00668 Condensation domain 1082 1521 2.8E-63 T 14-10-2018 IPR001242 Condensation domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF52777 209 457 2.33E-47 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3212 3223 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SMART SM00824 Thioesterase 3663 3886 3.3E-4 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF53474 3644 3876 1.04E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:1.10.1200.10 961 1043 3.2E-24 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF47336 2050 2117 1.18E-16 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF56801 3055 3579 6.67E-140 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.30.300.30 860 960 2.5E-28 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.30.300.30 1942 2045 6.3E-37 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF00550 Phosphopantetheine attachment site 2057 2118 6.6E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF00550 Phosphopantetheine attachment site 975 1037 3.6E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF00550 Phosphopantetheine attachment site 3570 3633 4.1E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.30.300.30 3464 3558 9.2E-27 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.30.559.30 2304 2574 2.2E-50 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.40.50.1820 3652 3889 6.8E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.30.559.10 36 405 1.8E-106 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SUPERFAMILY SSF47336 3561 3634 4.32E-14 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.40.50.12780 3050 3463 1.7E-125 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.40.50.12780 473 859 8.5E-104 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Gene3D G3DSA:3.40.50.12780 1539 1940 9.4E-123 T 14-10-2018 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SMART SM00823 Phosphopantetheine attachment site 2055 2123 8.4E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SMART SM00823 Phosphopantetheine attachment site 3568 3637 0.0041 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 SMART SM00823 Phosphopantetheine attachment site 973 1041 8.1E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF00501 AMP-binding enzyme 1553 1948 1.3E-80 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF00501 AMP-binding enzyme 487 865 9.3E-76 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0325 0ece58637ea0980bb5a79d93c379c990 3894 Pfam PF00501 AMP-binding enzyme 3063 3469 5.0E-82 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0755 7a99c8b5252344ff7cfa27c09b85c6dd 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.8E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0755 7a99c8b5252344ff7cfa27c09b85c6dd 313 Pfam PF03466 LysR substrate binding domain 91 284 2.8E-23 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0755 7a99c8b5252344ff7cfa27c09b85c6dd 313 Gene3D G3DSA:3.40.190.290 94 283 1.8E-23 T 14-10-2018 TMO_c0755 7a99c8b5252344ff7cfa27c09b85c6dd 313 SUPERFAMILY SSF53850 93 287 3.57E-28 T 14-10-2018 TMO_c0755 7a99c8b5252344ff7cfa27c09b85c6dd 313 Gene3D G3DSA:1.10.10.10 6 92 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0755 7a99c8b5252344ff7cfa27c09b85c6dd 313 SUPERFAMILY SSF46785 5 107 3.81E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0597 577c338345982734251dca3825af6cc2 560 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 11 538 2.4E-96 T 14-10-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015833|GO:0016021|GO:1904680 TMO_c0597 577c338345982734251dca3825af6cc2 560 Pfam PF00005 ABC transporter 350 484 1.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0597 577c338345982734251dca3825af6cc2 560 Gene3D G3DSA:3.40.50.300 328 557 2.5E-36 T 14-10-2018 TMO_c0597 577c338345982734251dca3825af6cc2 560 SMART SM00382 357 544 9.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0597 577c338345982734251dca3825af6cc2 560 SUPERFAMILY SSF52540 328 539 1.26E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0597 577c338345982734251dca3825af6cc2 560 Gene3D G3DSA:1.20.1560.10 10 304 2.5E-13 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_c0597 577c338345982734251dca3825af6cc2 560 SUPERFAMILY SSF90123 17 301 5.76E-19 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_b0569 351d5920cd9a544ee95048908569af27 389 SUPERFAMILY SSF47203 234 385 7.41E-54 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_b0569 351d5920cd9a544ee95048908569af27 389 Gene3D G3DSA:2.40.110.10 125 240 2.6E-39 T 14-10-2018 TMO_b0569 351d5920cd9a544ee95048908569af27 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 221 1.5E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_b0569 351d5920cd9a544ee95048908569af27 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 122 2.8E-25 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_b0569 351d5920cd9a544ee95048908569af27 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 383 4.0E-48 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_b0569 351d5920cd9a544ee95048908569af27 389 PIRSF PIRSF016578 141 389 8.1E-13 T 14-10-2018 TMO_b0569 351d5920cd9a544ee95048908569af27 389 PIRSF PIRSF016578 1 113 6.5E-8 T 14-10-2018 TMO_b0569 351d5920cd9a544ee95048908569af27 389 Gene3D G3DSA:1.10.540.10 19 123 2.1E-28 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_b0569 351d5920cd9a544ee95048908569af27 389 SUPERFAMILY SSF56645 12 245 6.28E-70 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_b0569 351d5920cd9a544ee95048908569af27 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 128 140 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_b0569 351d5920cd9a544ee95048908569af27 389 Gene3D G3DSA:1.20.140.10 241 387 4.9E-52 T 14-10-2018 TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 SMART SM00889 493 610 5.0E-56 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 SUPERFAMILY SSF50447 279 405 1.38E-9 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 SUPERFAMILY SSF54980 612 695 2.45E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 Gene3D G3DSA:3.40.50.300 30 293 4.8E-52 T 14-10-2018 TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 Pfam PF14492 Elongation Factor G, domain II 417 490 6.7E-16 T 14-10-2018 TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 SUPERFAMILY SSF54211 492 611 2.15E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 Gene3D G3DSA:3.30.230.10 497 701 5.2E-58 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 SMART SM00838 612 702 0.0027 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 Gene3D G3DSA:3.30.70.870 417 493 1.8E-16 T 14-10-2018 TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 SUPERFAMILY SSF54980 418 494 2.16E-12 T 14-10-2018 IPR035647 EF-G domain III/V-like TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 Gene3D G3DSA:3.40.50.300 23 401 4.8E-52 T 14-10-2018 TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 SUPERFAMILY SSF52540 22 295 1.31E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 Pfam PF00679 Elongation factor G C-terminus 612 700 4.1E-9 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 Pfam PF00009 Elongation factor Tu GTP binding domain 26 294 6.6E-20 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 Pfam PF03764 Elongation factor G, domain IV 492 609 3.3E-38 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TMO_1925 5ea8e7a62e6e37f004ea75b290a8a386 708 Gene3D G3DSA:3.30.70.240 616 689 5.2E-58 T 14-10-2018 TMO_0376 f6af606f800e70f476eda1a07e861445 756 SUPERFAMILY SSF47831 206 324 4.18E-28 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TMO_0376 f6af606f800e70f476eda1a07e861445 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 474 493 2.2E-16 T 14-10-2018 TMO_0376 f6af606f800e70f476eda1a07e861445 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 645 660 2.2E-16 T 14-10-2018 TMO_0376 f6af606f800e70f476eda1a07e861445 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 681 693 2.2E-16 T 14-10-2018 TMO_0376 f6af606f800e70f476eda1a07e861445 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 628 643 2.2E-16 T 14-10-2018 TMO_0376 f6af606f800e70f476eda1a07e861445 756 Pfam PF05524 PEP-utilising enzyme, N-terminal 189 307 2.3E-24 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TMO_0376 f6af606f800e70f476eda1a07e861445 756 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 434 722 1.8E-84 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TMO_0376 f6af606f800e70f476eda1a07e861445 756 SUPERFAMILY SSF51621 431 723 1.07E-87 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_0376 f6af606f800e70f476eda1a07e861445 756 SMART SM00065 27 173 2.9E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_0376 f6af606f800e70f476eda1a07e861445 756 SUPERFAMILY SSF55781 13 163 1.33E-23 T 14-10-2018 TMO_0376 f6af606f800e70f476eda1a07e861445 756 SUPERFAMILY SSF52009 306 421 2.22E-26 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TMO_0376 f6af606f800e70f476eda1a07e861445 756 Pfam PF13185 GAF domain 32 163 2.5E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_0376 f6af606f800e70f476eda1a07e861445 756 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 189 736 2.8E-122 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 TMO_0376 f6af606f800e70f476eda1a07e861445 756 Gene3D G3DSA:3.30.450.40 12 167 7.7E-36 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_0376 f6af606f800e70f476eda1a07e861445 756 Gene3D G3DSA:3.50.30.10 189 414 2.5E-56 T 14-10-2018 TMO_0376 f6af606f800e70f476eda1a07e861445 756 Pfam PF00391 PEP-utilising enzyme, mobile domain 333 404 5.0E-15 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_0376 f6af606f800e70f476eda1a07e861445 756 Gene3D G3DSA:3.20.20.60 415 752 1.1E-90 T 14-10-2018 TMO_0376 f6af606f800e70f476eda1a07e861445 756 Gene3D G3DSA:1.10.274.10 206 327 2.5E-56 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TMO_2248 2eee7dd22d07714ef8ca323fab8a8ec2 301 SUPERFAMILY SSF53850 90 293 2.09E-32 T 14-10-2018 TMO_2248 2eee7dd22d07714ef8ca323fab8a8ec2 301 Gene3D G3DSA:1.10.10.10 1 92 7.9E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2248 2eee7dd22d07714ef8ca323fab8a8ec2 301 SUPERFAMILY SSF46785 1 83 4.77E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2248 2eee7dd22d07714ef8ca323fab8a8ec2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2248 2eee7dd22d07714ef8ca323fab8a8ec2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2248 2eee7dd22d07714ef8ca323fab8a8ec2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2248 2eee7dd22d07714ef8ca323fab8a8ec2 301 Gene3D G3DSA:3.40.190.10 93 287 4.5E-41 T 14-10-2018 TMO_2248 2eee7dd22d07714ef8ca323fab8a8ec2 301 Gene3D G3DSA:3.40.190.10 163 266 4.5E-41 T 14-10-2018 TMO_2248 2eee7dd22d07714ef8ca323fab8a8ec2 301 Pfam PF03466 LysR substrate binding domain 88 289 5.1E-33 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2248 2eee7dd22d07714ef8ca323fab8a8ec2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.3E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0581 d4509d215b76921b792dec163bdb00de 499 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 22 38 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_b0581 d4509d215b76921b792dec163bdb00de 499 Gene3D G3DSA:3.30.160.270 361 434 4.1E-19 T 14-10-2018 TMO_b0581 d4509d215b76921b792dec163bdb00de 499 Pfam PF00682 HMGL-like 15 289 5.0E-68 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_b0581 d4509d215b76921b792dec163bdb00de 499 Gene3D G3DSA:3.20.20.70 1 360 1.6E-147 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_b0581 d4509d215b76921b792dec163bdb00de 499 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 225 238 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_b0581 d4509d215b76921b792dec163bdb00de 499 SUPERFAMILY SSF51569 4 312 6.01E-93 T 14-10-2018 TMO_b0581 d4509d215b76921b792dec163bdb00de 499 SUPERFAMILY SSF89000 373 421 7.45E-12 T 14-10-2018 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Gene3D G3DSA:2.150.10.10 89 128 7.8E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1313 74ff16203c3f68dc906af81d00a39254 524 PRINTS PR00313 NodO calcium binding signature 39 50 6.3E-10 T 14-10-2018 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 PRINTS PR00313 NodO calcium binding signature 162 170 6.3E-10 T 14-10-2018 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 PRINTS PR00313 NodO calcium binding signature 60 68 6.3E-10 T 14-10-2018 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 PRINTS PR00313 NodO calcium binding signature 189 198 6.3E-10 T 14-10-2018 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 SUPERFAMILY SSF51120 227 352 4.12E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1313 74ff16203c3f68dc906af81d00a39254 524 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 392 410 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1313 74ff16203c3f68dc906af81d00a39254 524 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 110 128 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF08548 Peptidase M10 serralysin C terminal 287 512 3.0E-7 T 14-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 60 76 0.21 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 161 178 1.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 5 21 0.74 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 405 421 0.0013 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 24 40 0.02 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 387 403 0.0079 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 227 244 0.088 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 246 262 0.21 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 78 94 0.11 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 180 196 1.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 41 58 0.0032 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 113 129 0.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 96 112 13.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 321 337 7.8 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 303 319 31.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Gene3D G3DSA:2.150.10.10 344 519 1.2E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1313 74ff16203c3f68dc906af81d00a39254 524 SUPERFAMILY SSF51120 9 142 3.66E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1313 74ff16203c3f68dc906af81d00a39254 524 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 105 126 4.2E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 387 408 4.2E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Gene3D G3DSA:2.150.10.10 45 88 2.7E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1313 74ff16203c3f68dc906af81d00a39254 524 SUPERFAMILY SSF51120 332 472 1.57E-20 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1313 74ff16203c3f68dc906af81d00a39254 524 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 101 119 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Gene3D G3DSA:2.150.10.10 1 44 1.4E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1313 74ff16203c3f68dc906af81d00a39254 524 SUPERFAMILY SSF51120 102 220 3.5E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Gene3D G3DSA:2.150.10.10 129 193 1.0E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Gene3D G3DSA:2.150.10.10 194 262 5.7E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1313 74ff16203c3f68dc906af81d00a39254 524 Gene3D G3DSA:2.150.10.10 263 343 5.0E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_a0095 5e6d8e73f58c2158b490cf43bd86bbeb 660 Pfam PF05954 Phage late control gene D protein (GPD) 48 349 2.1E-85 T 14-10-2018 TMO_a0095 5e6d8e73f58c2158b490cf43bd86bbeb 660 Gene3D G3DSA:3.30.1920.30 242 305 5.4E-98 T 14-10-2018 TMO_a0095 5e6d8e73f58c2158b490cf43bd86bbeb 660 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 29 536 4.0E-171 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset TMO_a0095 5e6d8e73f58c2158b490cf43bd86bbeb 660 SUPERFAMILY SSF69255 385 471 3.4E-33 T 14-10-2018 TMO_a0095 5e6d8e73f58c2158b490cf43bd86bbeb 660 SUPERFAMILY SSF69279 224 383 2.89E-32 T 14-10-2018 TMO_a0095 5e6d8e73f58c2158b490cf43bd86bbeb 660 Gene3D G3DSA:2.30.110.50 33 352 5.4E-98 T 14-10-2018 TMO_a0095 5e6d8e73f58c2158b490cf43bd86bbeb 660 SUPERFAMILY SSF69349 462 658 6.12E-19 T 14-10-2018 TMO_a0095 5e6d8e73f58c2158b490cf43bd86bbeb 660 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 42 524 4.8E-123 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein TMO_a0095 5e6d8e73f58c2158b490cf43bd86bbeb 660 Gene3D G3DSA:3.55.50.10 118 211 5.4E-98 T 14-10-2018 TMO_a0095 5e6d8e73f58c2158b490cf43bd86bbeb 660 Gene3D G3DSA:2.40.50.230 375 476 1.8E-42 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily TMO_a0095 5e6d8e73f58c2158b490cf43bd86bbeb 660 SUPERFAMILY SSF69279 30 206 2.13E-52 T 14-10-2018 TMO_0535 fd56cb7ab7725150d7f512a8f78a2af6 213 SUPERFAMILY SSF109604 32 122 4.19E-14 T 14-10-2018 TMO_0535 fd56cb7ab7725150d7f512a8f78a2af6 213 Pfam PF01966 HD domain 32 117 2.2E-7 T 14-10-2018 IPR006674 HD domain TMO_0535 fd56cb7ab7725150d7f512a8f78a2af6 213 Gene3D G3DSA:1.10.3210.10 10 188 5.3E-14 T 14-10-2018 TMO_a0262 0aa0719786cd14963c68c38b3c57a207 342 Pfam PF00107 Zinc-binding dehydrogenase 178 302 6.3E-29 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_a0262 0aa0719786cd14963c68c38b3c57a207 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 93 3.5E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_a0262 0aa0719786cd14963c68c38b3c57a207 342 Gene3D G3DSA:3.40.50.720 149 290 1.3E-105 T 14-10-2018 TMO_a0262 0aa0719786cd14963c68c38b3c57a207 342 SUPERFAMILY SSF51735 145 315 1.39E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0262 0aa0719786cd14963c68c38b3c57a207 342 Gene3D G3DSA:3.90.180.10 23 333 1.3E-105 T 14-10-2018 TMO_a0262 0aa0719786cd14963c68c38b3c57a207 342 SUPERFAMILY SSF50129 11 173 1.32E-33 T 14-10-2018 IPR011032 GroES-like superfamily TMO_a0262 0aa0719786cd14963c68c38b3c57a207 342 SMART SM00829 14 339 1.4E-17 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_1944 1d183b0fbf0c685a6b30f0967d6b79c0 408 SUPERFAMILY SSF53383 5 392 5.24E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_1944 1d183b0fbf0c685a6b30f0967d6b79c0 408 Gene3D G3DSA:3.90.1150.10 289 386 6.5E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_1944 1d183b0fbf0c685a6b30f0967d6b79c0 408 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TMO_1944 1d183b0fbf0c685a6b30f0967d6b79c0 408 Pfam PF00155 Aminotransferase class I and II 32 384 2.3E-58 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_1944 1d183b0fbf0c685a6b30f0967d6b79c0 408 Gene3D G3DSA:3.40.640.10 64 288 6.5E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 Gene3D G3DSA:3.30.565.10 476 631 4.5E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF08448 PAS fold 286 382 3.6E-5 T 14-10-2018 IPR013656 PAS fold-4 TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 SMART SM00387 515 628 5.0E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 SUPERFAMILY SSF47384 387 470 1.35E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF03707 Bacterial signalling protein N terminal repeat 190 255 2.9E-7 T 14-10-2018 IPR005330 MHYT domain TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF03707 Bacterial signalling protein N terminal repeat 64 121 9.5E-17 T 14-10-2018 IPR005330 MHYT domain TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF03707 Bacterial signalling protein N terminal repeat 127 176 5.6E-14 T 14-10-2018 IPR005330 MHYT domain TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 Gene3D G3DSA:1.10.287.130 391 471 6.3E-17 T 14-10-2018 TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 SUPERFAMILY SSF55874 461 626 1.7E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 567 2.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 612 625 2.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 606 2.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 581 2.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 SMART SM00388 401 470 1.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 Gene3D G3DSA:3.30.450.20 257 390 1.8E-7 T 14-10-2018 TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 627 2.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1417 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF00512 His Kinase A (phospho-acceptor) domain 401 470 7.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0542 dadb42dde89c9d1ac2191504b2b13a8e 300 Gene3D G3DSA:3.40.190.290 89 277 7.5E-31 T 14-10-2018 TMO_0542 dadb42dde89c9d1ac2191504b2b13a8e 300 SUPERFAMILY SSF46785 1 110 1.58E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0542 dadb42dde89c9d1ac2191504b2b13a8e 300 Pfam PF03466 LysR substrate binding domain 86 278 1.0E-27 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0542 dadb42dde89c9d1ac2191504b2b13a8e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0542 dadb42dde89c9d1ac2191504b2b13a8e 300 SUPERFAMILY SSF53850 87 281 3.98E-31 T 14-10-2018 TMO_0542 dadb42dde89c9d1ac2191504b2b13a8e 300 Gene3D G3DSA:1.10.10.10 2 85 2.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0973 b8281a7a7db6cb5a1e137f16f93e17da 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0973 b8281a7a7db6cb5a1e137f16f93e17da 519 SUPERFAMILY SSF56801 7 513 2.62E-152 T 14-10-2018 TMO_0973 b8281a7a7db6cb5a1e137f16f93e17da 519 Gene3D G3DSA:3.30.300.310 412 514 1.3E-34 T 14-10-2018 TMO_0973 b8281a7a7db6cb5a1e137f16f93e17da 519 Gene3D G3DSA:3.40.50.12780 2 411 5.4E-116 T 14-10-2018 TMO_0973 b8281a7a7db6cb5a1e137f16f93e17da 519 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 500 2.9E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0973 b8281a7a7db6cb5a1e137f16f93e17da 519 Pfam PF00501 AMP-binding enzyme 14 415 8.3E-101 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_1078 40f79607cb280596ae7f023d9a4c510a 387 SUPERFAMILY SSF64518 1 386 5.75E-74 T 14-10-2018 TMO_1078 40f79607cb280596ae7f023d9a4c510a 387 Pfam PF00700 Bacterial flagellin C-terminal helical region 301 386 1.5E-22 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_1078 40f79607cb280596ae7f023d9a4c510a 387 Gene3D G3DSA:1.10.8.410 337 386 7.3E-21 T 14-10-2018 TMO_1078 40f79607cb280596ae7f023d9a4c510a 387 PRINTS PR00207 Flagellin signature 37 54 9.4E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_1078 40f79607cb280596ae7f023d9a4c510a 387 PRINTS PR00207 Flagellin signature 111 134 9.4E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_1078 40f79607cb280596ae7f023d9a4c510a 387 PRINTS PR00207 Flagellin signature 76 95 9.4E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_1078 40f79607cb280596ae7f023d9a4c510a 387 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 3.6E-33 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_1078 40f79607cb280596ae7f023d9a4c510a 387 Gene3D G3DSA:1.20.1330.10 44 336 1.3E-55 T 14-10-2018 TMO_1078 40f79607cb280596ae7f023d9a4c510a 387 Gene3D G3DSA:3.30.70.2120 172 285 1.3E-55 T 14-10-2018 TMO_c0451 5da88f2df85fc5006609a8af708c1b74 339 SUPERFAMILY SSF161098 94 309 6.54E-19 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0451 5da88f2df85fc5006609a8af708c1b74 339 Gene3D G3DSA:1.10.3720.10 88 314 2.9E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0451 5da88f2df85fc5006609a8af708c1b74 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 322 2.4E-44 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3363 3942aef563db129d669a93d11ed16386 152 Gene3D G3DSA:3.10.20.400 17 114 2.6E-39 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 TMO_3363 3942aef563db129d669a93d11ed16386 152 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 24 127 31.21 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 TMO_3363 3942aef563db129d669a93d11ed16386 152 SUPERFAMILY SSF141734 26 131 3.53E-47 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 TMO_3363 3942aef563db129d669a93d11ed16386 152 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 50 123 4.0E-34 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 TMO_3363 3942aef563db129d669a93d11ed16386 152 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 73 126 2.0E-16 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 TMO_0544 e3ee6f3e54ff10ee277435bdbe12aa70 263 SUPERFAMILY SSF51182 30 199 1.6E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_0544 e3ee6f3e54ff10ee277435bdbe12aa70 263 Pfam PF12833 Helix-turn-helix domain 180 256 2.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0544 e3ee6f3e54ff10ee277435bdbe12aa70 263 SMART SM00342 174 256 3.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0544 e3ee6f3e54ff10ee277435bdbe12aa70 263 SUPERFAMILY SSF46689 211 256 1.21E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0544 e3ee6f3e54ff10ee277435bdbe12aa70 263 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_0544 e3ee6f3e54ff10ee277435bdbe12aa70 263 Gene3D G3DSA:1.10.10.60 158 261 1.1E-21 T 14-10-2018 TMO_1642 5fae476515fa68fa96a673697e52205f 410 Gene3D G3DSA:3.40.50.2300 53 361 5.7E-91 T 14-10-2018 TMO_1642 5fae476515fa68fa96a673697e52205f 410 SUPERFAMILY SSF53822 43 398 3.66E-86 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_1642 5fae476515fa68fa96a673697e52205f 410 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 45 61 4.5E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_1642 5fae476515fa68fa96a673697e52205f 410 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 83 4.5E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_1642 5fae476515fa68fa96a673697e52205f 410 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 86 104 4.5E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_1642 5fae476515fa68fa96a673697e52205f 410 Gene3D G3DSA:3.40.50.2300 164 293 5.7E-91 T 14-10-2018 TMO_1642 5fae476515fa68fa96a673697e52205f 410 Pfam PF13458 Periplasmic binding protein 45 394 6.1E-78 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_a0235 d17638f344e2331af21039559c965fb4 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 76 94 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 TMO_a0235 d17638f344e2331af21039559c965fb4 393 Gene3D G3DSA:3.40.47.10 3 391 5.9E-111 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0235 d17638f344e2331af21039559c965fb4 393 ProSitePatterns PS00737 Thiolases signature 2. 331 347 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 TMO_a0235 d17638f344e2331af21039559c965fb4 393 SUPERFAMILY SSF53901 10 387 8.51E-45 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0235 d17638f344e2331af21039559c965fb4 393 PIRSF PIRSF000429 1 391 4.5E-60 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_a0235 d17638f344e2331af21039559c965fb4 393 Pfam PF00108 Thiolase, N-terminal domain 6 111 5.2E-14 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_a0235 d17638f344e2331af21039559c965fb4 393 Pfam PF02803 Thiolase, C-terminal domain 269 367 1.6E-10 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 SMART SM00388 439 507 4.5E-27 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 Gene3D G3DSA:3.30.450.20 156 270 9.7E-7 T 14-10-2018 TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 Gene3D G3DSA:3.30.450.20 271 404 5.2E-7 T 14-10-2018 TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 SUPERFAMILY SSF55785 156 265 6.07E-5 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 SUPERFAMILY SSF55874 496 675 9.82E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 SUPERFAMILY SSF55785 260 388 1.17E-7 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 556 674 1.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 SMART SM00387 555 677 7.0E-40 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 Gene3D G3DSA:3.30.565.10 509 677 3.0E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 Pfam PF00512 His Kinase A (phospho-acceptor) domain 439 507 8.8E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 Pfam PF12860 PAS fold 281 394 7.6E-21 T 14-10-2018 TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 630 1.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 616 1.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 674 1.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 655 1.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 SUPERFAMILY SSF47384 427 508 6.08E-23 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0845 2f9bccc3f5eae8e9d5ed5cfc04aa3ab9 720 Gene3D G3DSA:1.10.287.130 426 508 3.1E-26 T 14-10-2018 TMO_0161 3f78c2707cadd4d7d57492b38106a1ed 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 266 3.0E-30 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2134 1bc3aea8a387a356016a9696788c3530 406 Gene3D G3DSA:3.40.50.2300 35 344 3.7E-115 T 14-10-2018 TMO_2134 1bc3aea8a387a356016a9696788c3530 406 Gene3D G3DSA:3.40.50.2300 151 282 3.7E-115 T 14-10-2018 TMO_2134 1bc3aea8a387a356016a9696788c3530 406 Pfam PF13458 Periplasmic binding protein 32 369 1.1E-91 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_2134 1bc3aea8a387a356016a9696788c3530 406 SUPERFAMILY SSF53822 32 404 3.26E-94 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_c0006 a8d8b58fca09c7a453eb3ed8107e82b1 61 Gene3D G3DSA:2.40.10.300 1 61 1.5E-25 T 14-10-2018 IPR038644 CopK superfamily TMO_c0006 a8d8b58fca09c7a453eb3ed8107e82b1 61 Pfam PF11525 Copper resistance protein K 1 59 1.6E-29 T 14-10-2018 IPR021604 Copper resistance protein K GO:0046872 TMO_a0407 c05e993998a27a2646bcc12cffadd1ab 452 SUPERFAMILY SSF51905 8 451 1.16E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0407 c05e993998a27a2646bcc12cffadd1ab 452 SUPERFAMILY SSF56425 250 392 1.07E-25 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_a0407 c05e993998a27a2646bcc12cffadd1ab 452 Gene3D G3DSA:3.50.50.60 8 449 1.2E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0407 c05e993998a27a2646bcc12cffadd1ab 452 Pfam PF00890 FAD binding domain 8 434 3.1E-54 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_a0407 c05e993998a27a2646bcc12cffadd1ab 452 Gene3D G3DSA:3.90.700.10 242 388 1.2E-112 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_c0663 92f5b342e093e6447b45d1b9d3318c44 224 Pfam PF13417 Glutathione S-transferase, N-terminal domain 20 90 3.8E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_c0663 92f5b342e093e6447b45d1b9d3318c44 224 SUPERFAMILY SSF52833 12 95 6.08E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0663 92f5b342e093e6447b45d1b9d3318c44 224 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 14 222 6.8E-80 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 TMO_c0663 92f5b342e093e6447b45d1b9d3318c44 224 Pfam PF13410 Glutathione S-transferase, C-terminal domain 140 200 3.4E-6 T 14-10-2018 TMO_c0663 92f5b342e093e6447b45d1b9d3318c44 224 Gene3D G3DSA:1.20.1050.10 99 224 1.2E-48 T 14-10-2018 TMO_c0663 92f5b342e093e6447b45d1b9d3318c44 224 SUPERFAMILY SSF47616 92 222 3.98E-28 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_c0663 92f5b342e093e6447b45d1b9d3318c44 224 Gene3D G3DSA:3.40.30.10 11 98 7.0E-20 T 14-10-2018 TMO_c0411 d359f9bb69ee8c9a1d0246aa1628b79b 428 SUPERFAMILY SSF82784 231 424 8.77E-39 T 14-10-2018 IPR036102 OsmC/Ohr superfamily TMO_c0411 d359f9bb69ee8c9a1d0246aa1628b79b 428 Gene3D G3DSA:3.30.300.20 286 427 3.9E-37 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_c0411 d359f9bb69ee8c9a1d0246aa1628b79b 428 Pfam PF00561 alpha/beta hydrolase fold 36 141 5.5E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0411 d359f9bb69ee8c9a1d0246aa1628b79b 428 Pfam PF02566 OsmC-like protein 320 422 7.9E-17 T 14-10-2018 IPR003718 OsmC/Ohr family TMO_c0411 d359f9bb69ee8c9a1d0246aa1628b79b 428 Gene3D G3DSA:3.40.50.1820 8 265 2.0E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0411 d359f9bb69ee8c9a1d0246aa1628b79b 428 SUPERFAMILY SSF53474 8 255 2.49E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0489 34136a1077cf65be45c205fd1cb4e148 83 SUPERFAMILY SSF47336 3 81 6.54E-13 T 14-10-2018 IPR036736 ACP-like superfamily TMO_0489 34136a1077cf65be45c205fd1cb4e148 83 Pfam PF00550 Phosphopantetheine attachment site 8 75 2.6E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_0489 34136a1077cf65be45c205fd1cb4e148 83 Gene3D G3DSA:1.10.1200.10 1 79 9.9E-15 T 14-10-2018 IPR036736 ACP-like superfamily TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 SUPERFAMILY SSF52440 1 101 9.78E-32 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 292 4.5E-81 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 SMART SM01209 101 292 2.4E-137 T 14-10-2018 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 SUPERFAMILY SSF51246 325 422 3.71E-31 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 42.756 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 Gene3D G3DSA:3.90.600.10 326 423 3.0E-33 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 Gene3D G3DSA:3.40.50.20 1 93 7.2E-33 T 14-10-2018 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.0E-31 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 SUPERFAMILY SSF56059 102 319 4.24E-62 T 14-10-2018 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 Gene3D G3DSA:3.30.1490.20 119 187 1.3E-25 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 4.8E-162 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 420 3.4E-28 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 Gene3D G3DSA:3.30.470.20 188 325 3.4E-56 T 14-10-2018 TMO_2874 aa5905a320dc184b886612a8cff8dab2 423 SMART SM01210 326 422 3.6E-51 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_3233 8c67fa16be8659c006e70585144ba9e2 234 Gene3D G3DSA:3.20.20.70 11 231 3.2E-59 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3233 8c67fa16be8659c006e70585144ba9e2 234 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 13 229 37.681 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 TMO_3233 8c67fa16be8659c006e70585144ba9e2 234 SUPERFAMILY SSF51366 14 227 2.51E-53 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TMO_3233 8c67fa16be8659c006e70585144ba9e2 234 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 15 224 8.4E-38 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 Gene3D G3DSA:3.30.390.10 1 127 8.8E-54 T 14-10-2018 IPR029017 Enolase-like, N-terminal TMO_1746 d02b154a39f7dea77d497cc991faa594 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 424 2.5E-134 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 SMART SM01193 4 134 9.1E-90 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 SUPERFAMILY SSF54826 3 138 4.07E-54 T 14-10-2018 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 311 322 1.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 161 174 1.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 363 380 1.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 334 348 1.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 37 51 1.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 107 123 1.4E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 SMART SM01192 139 425 5.4E-222 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 422 1.3E-207 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 ProSitePatterns PS00164 Enolase signature. 334 347 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 Hamap MF_00318 Enolase [eno]. 2 411 44.688 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 Gene3D G3DSA:3.20.20.120 129 429 9.2E-132 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TMO_1746 d02b154a39f7dea77d497cc991faa594 429 SUPERFAMILY SSF51604 139 423 1.57E-129 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TMO_1746 d02b154a39f7dea77d497cc991faa594 429 Pfam PF03952 Enolase, N-terminal domain 4 134 5.3E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_1746 d02b154a39f7dea77d497cc991faa594 429 PIRSF PIRSF001400 1 425 1.3E-187 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_a0045 9a20cc80e00513029836ca8c6c43ff42 94 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 24 89 7.0E-14 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D TMO_a0045 9a20cc80e00513029836ca8c6c43ff42 94 Gene3D G3DSA:1.10.10.1150 18 91 2.6E-8 T 14-10-2018 TMO_3322 8c68a2188915363514ef8b8bc50540a3 411 Pfam PF03594 Benzoate membrane transport protein 19 387 2.5E-133 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 TMO_3322 8c68a2188915363514ef8b8bc50540a3 411 TIGRFAM TIGR00843 benE: benzoate transporter 19 389 3.2E-114 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 TMO_c0449 f0f01797fc9680bcb309c2fbe0717729 245 Pfam PF01925 Sulfite exporter TauE/SafE 10 233 5.0E-26 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_3343 848c4c7659ee21b5b1984c404168bb6b 640 Gene3D G3DSA:3.10.450.40 3 105 2.6E-15 T 14-10-2018 TMO_3343 848c4c7659ee21b5b1984c404168bb6b 640 ProSitePatterns PS01164 Copper amine oxidase topaquinone signature. 370 383 - T 14-10-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 TMO_3343 848c4c7659ee21b5b1984c404168bb6b 640 SUPERFAMILY SSF54416 13 101 6.69E-15 T 14-10-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 TMO_3343 848c4c7659ee21b5b1984c404168bb6b 640 Pfam PF02727 Copper amine oxidase, N2 domain 16 91 2.7E-7 T 14-10-2018 IPR015800 Copper amine oxidase, N2-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751|Reactome: R-HSA-211945 TMO_3343 848c4c7659ee21b5b1984c404168bb6b 640 Gene3D G3DSA:3.10.450.40 106 208 2.4E-32 T 14-10-2018 TMO_3343 848c4c7659ee21b5b1984c404168bb6b 640 Pfam PF02728 Copper amine oxidase, N3 domain 102 203 2.7E-19 T 14-10-2018 IPR015802 Copper amine oxidase, N3-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751|Reactome: R-HSA-211945 TMO_3343 848c4c7659ee21b5b1984c404168bb6b 640 SUPERFAMILY SSF49998 214 630 7.06E-156 T 14-10-2018 IPR036460 Copper amine oxidase, catalytic domain superfamily GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 TMO_3343 848c4c7659ee21b5b1984c404168bb6b 640 Gene3D G3DSA:2.70.98.20 209 626 3.5E-160 T 14-10-2018 IPR036460 Copper amine oxidase, catalytic domain superfamily GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 TMO_3343 848c4c7659ee21b5b1984c404168bb6b 640 Pfam PF01179 Copper amine oxidase, enzyme domain 225 626 1.3E-157 T 14-10-2018 IPR015798 Copper amine oxidase, catalytic domain GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 TMO_3343 848c4c7659ee21b5b1984c404168bb6b 640 SUPERFAMILY SSF54416 102 214 8.14E-35 T 14-10-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 TMO_2431 d752805f755fb99053442fcb2ba0e3cb 394 SUPERFAMILY SSF51905 3 393 2.81E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2431 d752805f755fb99053442fcb2ba0e3cb 394 Pfam PF01494 FAD binding domain 4 345 1.1E-79 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 TMO_2431 d752805f755fb99053442fcb2ba0e3cb 394 SUPERFAMILY SSF54373 178 278 1.41E-40 T 14-10-2018 TMO_2431 d752805f755fb99053442fcb2ba0e3cb 394 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 4 394 2.5E-169 T 14-10-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 TMO_2431 d752805f755fb99053442fcb2ba0e3cb 394 Gene3D G3DSA:3.30.9.10 75 391 3.7E-165 T 14-10-2018 TMO_2431 d752805f755fb99053442fcb2ba0e3cb 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 6.0E-27 T 14-10-2018 TMO_2431 d752805f755fb99053442fcb2ba0e3cb 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 6.0E-27 T 14-10-2018 TMO_2431 d752805f755fb99053442fcb2ba0e3cb 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 6.0E-27 T 14-10-2018 TMO_2431 d752805f755fb99053442fcb2ba0e3cb 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 6.0E-27 T 14-10-2018 TMO_2431 d752805f755fb99053442fcb2ba0e3cb 394 Gene3D G3DSA:3.50.50.60 4 354 3.7E-165 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2026 7dbc40e55d5f2c10d1c95b5c170e1dca 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 325 2.9E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2026 7dbc40e55d5f2c10d1c95b5c170e1dca 332 Gene3D G3DSA:1.10.3720.10 84 326 4.4E-17 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2026 7dbc40e55d5f2c10d1c95b5c170e1dca 332 SUPERFAMILY SSF161098 99 308 3.6E-12 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 156 163 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 Gene3D G3DSA:3.30.360.10 157 321 5.9E-118 T 14-10-2018 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 SMART SM00846 8 158 2.0E-54 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 163 319 2.0E-58 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 SUPERFAMILY SSF55347 158 320 6.25E-63 T 14-10-2018 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 275 290 1.4E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 179 195 1.4E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 114 127 1.4E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 152 170 1.4E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 235 252 1.4E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 9 331 2.0E-111 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 Gene3D G3DSA:3.40.50.720 9 334 5.9E-118 T 14-10-2018 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 9 107 1.5E-24 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 SUPERFAMILY SSF51735 9 186 8.2E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0483 8fcc9d88585ca9c42541b3a66895ae62 340 PIRSF PIRSF000149 7 340 4.5E-110 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0518 c4ad58db7275aeb1b29644fe93f326b8 482 SUPERFAMILY SSF53901 4 160 2.0E-17 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0518 c4ad58db7275aeb1b29644fe93f326b8 482 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 213 291 7.6E-8 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TMO_a0518 c4ad58db7275aeb1b29644fe93f326b8 482 SUPERFAMILY SSF50249 351 458 4.45E-10 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_a0518 c4ad58db7275aeb1b29644fe93f326b8 482 Gene3D G3DSA:3.40.47.10 196 297 1.6E-14 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0518 c4ad58db7275aeb1b29644fe93f326b8 482 Gene3D G3DSA:3.40.47.10 1 189 9.7E-23 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0518 c4ad58db7275aeb1b29644fe93f326b8 482 SUPERFAMILY SSF53901 181 291 5.01E-13 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0518 c4ad58db7275aeb1b29644fe93f326b8 482 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 363 389 2.6E-5 T 14-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal TMO_1374 0ee971c098215cd3ed3413a62cea4664 303 Pfam PF03466 LysR substrate binding domain 90 286 8.8E-35 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1374 0ee971c098215cd3ed3413a62cea4664 303 Gene3D G3DSA:3.40.190.290 91 286 2.1E-39 T 14-10-2018 TMO_1374 0ee971c098215cd3ed3413a62cea4664 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1374 0ee971c098215cd3ed3413a62cea4664 303 SUPERFAMILY SSF53850 90 290 4.71E-40 T 14-10-2018 TMO_1374 0ee971c098215cd3ed3413a62cea4664 303 Gene3D G3DSA:1.10.10.10 3 84 4.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1374 0ee971c098215cd3ed3413a62cea4664 303 SUPERFAMILY SSF46785 1 111 9.91E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2825 263c480d407b09d05780bfac512d9760 506 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 437 1.7E-162 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 TMO_2825 263c480d407b09d05780bfac512d9760 506 SUPERFAMILY SSF50475 3 328 3.1E-109 T 14-10-2018 TMO_2825 263c480d407b09d05780bfac512d9760 506 Gene3D G3DSA:3.40.1670.10 343 460 1.7E-52 T 14-10-2018 TMO_2825 263c480d407b09d05780bfac512d9760 506 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 461 2.0E-151 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 TMO_2825 263c480d407b09d05780bfac512d9760 506 Gene3D G3DSA:1.20.5.570 461 501 6.7E-11 T 14-10-2018 TMO_2825 263c480d407b09d05780bfac512d9760 506 SUPERFAMILY SSF143968 329 493 4.58E-68 T 14-10-2018 TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 SUPERFAMILY SSF47384 145 228 5.49E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 Gene3D G3DSA:1.10.287.130 112 228 1.5E-22 T 14-10-2018 TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 SMART SM00304 108 161 6.1E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 273 380 3.2E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 SMART SM00387 272 383 2.6E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 41 380 3.5E-127 T 14-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 337 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 323 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 362 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 Pfam PF00512 His Kinase A (phospho-acceptor) domain 163 226 1.6E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 SUPERFAMILY SSF55874 218 381 8.25E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 SMART SM00388 162 228 2.1E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0014 677826a9c3b408adc2872f10aac36d16 384 Gene3D G3DSA:3.30.565.10 234 383 2.4E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1006 bd52743f6341a87b03f803c59a3dc821 204 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 183 9.0E-41 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 TMO_1006 bd52743f6341a87b03f803c59a3dc821 204 Hamap MF_00528 Septum formation protein Maf [maf]. 1 190 28.795 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 TMO_1006 bd52743f6341a87b03f803c59a3dc821 204 Gene3D G3DSA:3.90.950.10 1 192 1.4E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_1006 bd52743f6341a87b03f803c59a3dc821 204 SUPERFAMILY SSF52972 1 183 3.92E-55 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_1006 bd52743f6341a87b03f803c59a3dc821 204 PIRSF PIRSF006305 1 192 4.7E-47 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 TMO_1006 bd52743f6341a87b03f803c59a3dc821 204 Pfam PF02545 Maf-like protein 1 184 9.8E-50 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 TMO_3506 3200a1f77cee9a1673f96179bfbded4f 460 SUPERFAMILY SSF161098 201 447 2.49E-31 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3506 3200a1f77cee9a1673f96179bfbded4f 460 Pfam PF12501 Phosphate ATP-binding cassette transporter 7 178 1.6E-36 T 14-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 TMO_3506 3200a1f77cee9a1673f96179bfbded4f 460 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 162 455 6.6E-84 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 TMO_3506 3200a1f77cee9a1673f96179bfbded4f 460 Gene3D G3DSA:1.10.3720.10 225 458 4.9E-34 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3506 3200a1f77cee9a1673f96179bfbded4f 460 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 247 456 2.4E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 Gene3D G3DSA:3.40.50.720 2 258 2.5E-74 T 14-10-2018 TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 5.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 5.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 5.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 SUPERFAMILY SSF51735 12 258 1.04E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 4.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 4.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_0817 c375fb3b52b1d14575de25c7160a3db0 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 256 1.9E-61 T 14-10-2018 TMO_b0521 d6572d90f272371e0be514101d0af096 136 SUPERFAMILY SSF46785 6 91 9.8E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0521 d6572d90f272371e0be514101d0af096 136 Gene3D G3DSA:1.10.10.10 4 87 9.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0521 d6572d90f272371e0be514101d0af096 136 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 8.1E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0521 d6572d90f272371e0be514101d0af096 136 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0521 d6572d90f272371e0be514101d0af096 136 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0521 d6572d90f272371e0be514101d0af096 136 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 Gene3D G3DSA:2.30.130.40 17 137 6.1E-35 T 14-10-2018 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 695 703 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 SMART SM00382 368 525 7.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 692 711 3.1E-55 T 14-10-2018 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 614 630 3.1E-55 T 14-10-2018 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 722 741 3.1E-55 T 14-10-2018 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 376 395 3.1E-55 T 14-10-2018 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 745 763 3.1E-55 T 14-10-2018 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 SUPERFAMILY SSF52540 333 606 1.18E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 Gene3D G3DSA:1.20.58.1480 142 265 3.1E-45 T 14-10-2018 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 Gene3D G3DSA:3.30.230.10 612 796 3.2E-79 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 372 508 1.4E-18 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 SMART SM00464 30 222 1.1E-81 T 14-10-2018 IPR003111 Lon, substrate-binding domain TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 589 791 1.5E-96 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 Gene3D G3DSA:1.10.8.60 511 603 1.7E-29 T 14-10-2018 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 31 220 8.1E-42 T 14-10-2018 IPR003111 Lon, substrate-binding domain TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 PIRSF PIRSF001174 19 793 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 TIGRFAM TIGR00763 lon: endopeptidase La 32 790 1.9E-299 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 SUPERFAMILY SSF88697 32 221 5.22E-50 T 14-10-2018 IPR015947 PUA-like superfamily TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 Hamap MF_01973 Lon protease [lon]. 31 791 72.243 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 SUPERFAMILY SSF54211 614 789 2.73E-58 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_1981 4e7bf44545ea389abd3e21fae69a7e91 827 Gene3D G3DSA:3.40.50.300 334 510 2.8E-62 T 14-10-2018 TMO_2602 3587e0345db9dbc6192db5c0a8b96f1d 238 Gene3D G3DSA:3.40.50.1000 11 212 1.2E-51 T 14-10-2018 IPR023214 HAD superfamily TMO_2602 3587e0345db9dbc6192db5c0a8b96f1d 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 187 1.8E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_2602 3587e0345db9dbc6192db5c0a8b96f1d 238 SUPERFAMILY SSF56784 9 224 4.75E-54 T 14-10-2018 IPR036412 HAD-like superfamily TMO_2602 3587e0345db9dbc6192db5c0a8b96f1d 238 Gene3D G3DSA:1.10.150.240 23 91 1.2E-51 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TMO_2602 3587e0345db9dbc6192db5c0a8b96f1d 238 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 129 193 6.5E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_2602 3587e0345db9dbc6192db5c0a8b96f1d 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 193 2.1E-29 T 14-10-2018 TMO_c0203 a02aa8d4e351ff583526c7f752795b3f 339 PIRSF PIRSF036540 2 321 2.2E-86 T 14-10-2018 IPR011413 Uncharacterised conserved protein UCP036540 TMO_c0203 a02aa8d4e351ff583526c7f752795b3f 339 Gene3D G3DSA:3.30.1330.10 9 147 1.8E-27 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TMO_c0203 a02aa8d4e351ff583526c7f752795b3f 339 SUPERFAMILY SSF56042 159 303 1.64E-20 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TMO_c0203 a02aa8d4e351ff583526c7f752795b3f 339 TIGRFAM TIGR04049 AIR_rel_sll0787: AIR synthase-related protein, sll0787 family 4 317 2.9E-134 T 14-10-2018 IPR024030 AIR synthase-related protein, sll0787 family TMO_c0203 a02aa8d4e351ff583526c7f752795b3f 339 SUPERFAMILY SSF55326 26 150 4.45E-27 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TMO_c0203 a02aa8d4e351ff583526c7f752795b3f 339 Pfam PF02769 AIR synthase related protein, C-terminal domain 199 298 4.1E-14 T 14-10-2018 IPR010918 PurM-like, C-terminal domain TMO_c0203 a02aa8d4e351ff583526c7f752795b3f 339 Pfam PF00586 AIR synthase related protein, N-terminal domain 44 148 1.7E-21 T 14-10-2018 IPR016188 PurM-like, N-terminal domain TMO_c0203 a02aa8d4e351ff583526c7f752795b3f 339 Gene3D G3DSA:3.90.650.10 148 309 3.8E-17 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TMO_2231 92dbdf8d19f5de76c9c5495ba4d9e449 206 Gene3D G3DSA:3.40.50.10140 8 143 5.6E-6 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TMO_2231 92dbdf8d19f5de76c9c5495ba4d9e449 206 SUPERFAMILY SSF52200 36 151 2.75E-5 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TMO_2610 f0d64f371f31a1ce69a373c178240d25 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.597 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2610 f0d64f371f31a1ce69a373c178240d25 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 5.4E-33 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2610 f0d64f371f31a1ce69a373c178240d25 122 Gene3D G3DSA:1.10.8.50 1 72 8.8E-29 T 14-10-2018 TMO_2610 f0d64f371f31a1ce69a373c178240d25 122 PIRSF PIRSF002134 1 122 1.6E-45 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2610 f0d64f371f31a1ce69a373c178240d25 122 Gene3D G3DSA:4.10.910.10 73 119 1.2E-27 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2610 f0d64f371f31a1ce69a373c178240d25 122 SUPERFAMILY SSF46946 2 121 6.92E-47 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 TMO_2610 f0d64f371f31a1ce69a373c178240d25 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2610 f0d64f371f31a1ce69a373c178240d25 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.1E-54 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_b0595 8c9f8cac3d0ab2beed40620f69f70fcd 135 PIRSF PIRSF004638 1 135 2.7E-16 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 TMO_b0595 8c9f8cac3d0ab2beed40620f69f70fcd 135 Pfam PF03653 Uncharacterised protein family (UPF0093) 47 134 1.6E-12 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 Pfam PF00158 Sigma-54 interaction domain 321 488 1.4E-61 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 Gene3D G3DSA:1.10.10.60 565 628 6.4E-12 T 14-10-2018 TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 SUPERFAMILY SSF52540 320 565 2.76E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 SUPERFAMILY SSF46689 535 626 7.89E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 SMART SM00382 341 485 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 590 607 4.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 607 627 4.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 Gene3D G3DSA:3.30.450.40 15 201 1.8E-53 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 535 544 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 Gene3D G3DSA:3.40.50.300 312 493 1.9E-59 T 14-10-2018 TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 Gene3D G3DSA:1.10.8.60 494 564 1.2E-18 T 14-10-2018 TMO_1431 e7138b79c3f6ef0749c40bd733787492 631 Pfam PF02954 Bacterial regulatory protein, Fis family 583 624 6.7E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_3017 582e3c0e4af16ba855e7cb27eb0fcee9 298 SUPERFAMILY SSF161098 91 298 5.1E-30 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3017 582e3c0e4af16ba855e7cb27eb0fcee9 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 297 1.1E-31 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3017 582e3c0e4af16ba855e7cb27eb0fcee9 298 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 67 9.1E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_3017 582e3c0e4af16ba855e7cb27eb0fcee9 298 Gene3D G3DSA:1.10.3720.10 84 297 1.0E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2593 7f9918e1c94519af8c0873347a56dfe8 231 Pfam PF03099 Biotin/lipoate A/B protein ligase family 76 174 5.4E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TMO_2593 7f9918e1c94519af8c0873347a56dfe8 231 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 81 96 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TMO_2593 7f9918e1c94519af8c0873347a56dfe8 231 Hamap MF_00013 Octanoyltransferase [lipB]. 13 221 34.33 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TMO_2593 7f9918e1c94519af8c0873347a56dfe8 231 PIRSF PIRSF016262 13 229 1.6E-54 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TMO_2593 7f9918e1c94519af8c0873347a56dfe8 231 Gene3D G3DSA:3.30.930.10 12 218 1.5E-61 T 14-10-2018 TMO_2593 7f9918e1c94519af8c0873347a56dfe8 231 SUPERFAMILY SSF55681 16 221 5.3E-64 T 14-10-2018 TMO_2593 7f9918e1c94519af8c0873347a56dfe8 231 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 38 197 1.9E-45 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TMO_2593 7f9918e1c94519af8c0873347a56dfe8 231 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 85 138 4.0E-16 T 14-10-2018 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 SMART SM00475 10 265 6.1E-122 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 SMART SM00279 176 211 1.5E-14 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 SMART SM00474 321 527 4.1E-22 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:1.10.150.20 719 862 4.9E-105 T 14-10-2018 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 12 173 3.4E-56 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:1.10.150.20 177 250 4.1E-94 T 14-10-2018 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 823 834 2.6E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 764 789 2.6E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 801 812 2.6E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 855 871 2.6E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 740 753 2.6E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 710 733 2.6E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 665 687 2.6E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 688 703 2.6E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 885 898 2.6E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:3.40.50.1010 12 281 4.1E-94 T 14-10-2018 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:3.30.70.370 674 934 4.9E-105 T 14-10-2018 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 Pfam PF01612 3'-5' exonuclease 321 526 1.1E-30 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 TIGRFAM TIGR00593 pola: DNA polymerase I 12 938 2.4E-282 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 SMART SM00482 696 902 1.4E-115 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 SUPERFAMILY SSF88723 9 173 4.25E-53 T 14-10-2018 IPR029060 PIN-like domain superfamily TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:3.30.420.10 318 551 2.8E-61 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 SUPERFAMILY SSF56672 533 938 7.67E-148 T 14-10-2018 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 268 3.6E-29 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:1.20.1060.10 552 668 2.6E-38 T 14-10-2018 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 ProSitePatterns PS00447 DNA polymerase family A signature. 764 783 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 SUPERFAMILY SSF47807 174 288 1.0E-28 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 SUPERFAMILY SSF53098 319 526 5.22E-48 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_3211 c8ba3335655464aaaa76c8c4294158fc 938 Pfam PF00476 DNA polymerase family A 560 935 2.1E-146 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_c0654 d837a7407fa335cc74decd4e7dafb50b 424 Gene3D G3DSA:1.20.1250.20 5 389 4.2E-20 T 14-10-2018 TMO_c0654 d837a7407fa335cc74decd4e7dafb50b 424 Pfam PF07690 Major Facilitator Superfamily 16 350 2.6E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0654 d837a7407fa335cc74decd4e7dafb50b 424 SUPERFAMILY SSF103473 7 394 8.63E-24 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 205 223 1.9E-20 T 14-10-2018 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 334 350 1.9E-20 T 14-10-2018 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 125 1.9E-20 T 14-10-2018 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 380 402 1.9E-20 T 14-10-2018 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 266 1.9E-20 T 14-10-2018 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 Gene3D G3DSA:3.50.50.60 108 426 1.3E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 SUPERFAMILY SSF51905 96 425 3.79E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 105 416 1.8E-30 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 Gene3D G3DSA:3.50.50.60 217 342 1.3E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 244 268 3.7E-33 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 336 357 3.7E-33 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 127 3.7E-33 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 153 3.7E-33 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 206 214 3.7E-33 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 298 314 3.7E-33 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_2185 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 159 169 3.7E-33 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 Gene3D G3DSA:3.90.226.10 10 300 9.5E-85 T 14-10-2018 TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 Gene3D G3DSA:3.40.50.720 304 487 7.8E-66 T 14-10-2018 TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 203 1.2E-34 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 SUPERFAMILY SSF48179 486 627 4.17E-22 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 307 484 9.6E-62 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 484 508 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 SUPERFAMILY SSF52096 14 298 1.03E-62 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 Gene3D G3DSA:1.10.1040.50 489 708 2.2E-72 T 14-10-2018 TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 701 1.9E-6 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 487 580 1.4E-18 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 SUPERFAMILY SSF51735 303 485 1.82E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0632 eb14d6c7299c9eb5413f4ea3761db715 710 SUPERFAMILY SSF48179 611 703 9.35E-23 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 SMART SM00283 434 688 2.4E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 Gene3D G3DSA:3.30.450.20 57 311 7.9E-42 T 14-10-2018 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 Gene3D G3DSA:3.30.450.20 66 212 7.9E-42 T 14-10-2018 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 Pfam PF00672 HAMP domain 345 392 3.9E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 498 659 1.1E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 Gene3D G3DSA:1.10.287.950 401 693 2.8E-48 T 14-10-2018 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 SMART SM00304 344 397 2.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 Pfam PF02743 Cache domain 47 247 4.1E-16 T 14-10-2018 IPR033479 Double Cache domain 1 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 491 8.7E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 609 638 8.7E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 561 590 8.7E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 SUPERFAMILY SSF58104 376 685 1.44E-50 T 14-10-2018 TMO_0229 6eda6fa998bdfe4c5635ea45b8dffab5 694 Gene3D G3DSA:1.20.1480.50 312 400 1.3E-15 T 14-10-2018 TMO_d0043 2f79a0aabf80c01a4062808734ce2124 248 Gene3D G3DSA:3.40.190.10 25 246 1.0E-57 T 14-10-2018 TMO_d0043 2f79a0aabf80c01a4062808734ce2124 248 SUPERFAMILY SSF53850 1 247 1.48E-62 T 14-10-2018 TMO_d0043 2f79a0aabf80c01a4062808734ce2124 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 247 3.8E-57 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_d0043 2f79a0aabf80c01a4062808734ce2124 248 SMART SM00062 26 248 4.8E-51 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_d0043 2f79a0aabf80c01a4062808734ce2124 248 Gene3D G3DSA:3.40.190.10 111 212 1.0E-57 T 14-10-2018 TMO_3444 ff849d748000d063b3e404d364011f15 253 Gene3D G3DSA:1.10.12.10 198 252 1.7E-8 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_3444 ff849d748000d063b3e404d364011f15 253 Gene3D G3DSA:3.90.226.10 1 197 1.3E-40 T 14-10-2018 TMO_3444 ff849d748000d063b3e404d364011f15 253 SUPERFAMILY SSF52096 2 252 8.4E-51 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_3444 ff849d748000d063b3e404d364011f15 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 252 2.5E-29 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_1119 f86e46678a8f2ca4948c20cabd0d0dc3 94 SUPERFAMILY SSF160544 5 86 7.19E-20 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TMO_1119 f86e46678a8f2ca4948c20cabd0d0dc3 94 Gene3D G3DSA:3.40.1690.10 6 87 2.3E-21 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TMO_1119 f86e46678a8f2ca4948c20cabd0d0dc3 94 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 81 3.4E-16 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_1430 c51bcc0f42a68ffe868ee0966e0efcfb 725 Pfam PF01968 Hydantoinase/oxoprolinase 232 517 4.3E-76 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_1430 c51bcc0f42a68ffe868ee0966e0efcfb 725 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 19 206 4.3E-42 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_1430 c51bcc0f42a68ffe868ee0966e0efcfb 725 SUPERFAMILY SSF53067 18 338 2.27E-5 T 14-10-2018 TMO_a0374 be64a3d1b882691ffc04d78c8172f1e4 234 PIRSF PIRSF009320 1 228 2.9E-37 T 14-10-2018 TMO_a0374 be64a3d1b882691ffc04d78c8172f1e4 234 Gene3D G3DSA:3.40.50.300 1 217 3.3E-36 T 14-10-2018 TMO_a0374 be64a3d1b882691ffc04d78c8172f1e4 234 SUPERFAMILY SSF52540 1 197 6.12E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0374 be64a3d1b882691ffc04d78c8172f1e4 234 Pfam PF07015 VirC1 protein 1 223 1.8E-14 T 14-10-2018 IPR009744 VirC1 TMO_2892 b805b44b2d024e53620d7f625815b047 325 Pfam PF06574 FAD synthetase 14 167 3.6E-47 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TMO_2892 b805b44b2d024e53620d7f625815b047 325 Gene3D G3DSA:3.40.50.620 1 185 2.1E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_2892 b805b44b2d024e53620d7f625815b047 325 SUPERFAMILY SSF82114 174 318 1.2E-42 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 TMO_2892 b805b44b2d024e53620d7f625815b047 325 SUPERFAMILY SSF52374 17 176 6.57E-26 T 14-10-2018 TMO_2892 b805b44b2d024e53620d7f625815b047 325 SMART SM00904 183 317 9.1E-61 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 TMO_2892 b805b44b2d024e53620d7f625815b047 325 Pfam PF01687 Riboflavin kinase 184 316 6.3E-37 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 TMO_2892 b805b44b2d024e53620d7f625815b047 325 PIRSF PIRSF004491 1 323 8.0E-96 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TMO_2892 b805b44b2d024e53620d7f625815b047 325 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 316 1.7E-79 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TMO_2892 b805b44b2d024e53620d7f625815b047 325 Gene3D G3DSA:2.40.30.30 186 324 3.1E-42 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 TMO_a0112 05bc211c09c24f1c91fc526579faa4cb 276 SUPERFAMILY SSF46689 226 272 2.6E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0112 05bc211c09c24f1c91fc526579faa4cb 276 Pfam PF02311 AraC-like ligand binding domain 22 155 2.0E-22 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_a0112 05bc211c09c24f1c91fc526579faa4cb 276 Gene3D G3DSA:1.10.10.60 175 275 8.1E-20 T 14-10-2018 TMO_a0112 05bc211c09c24f1c91fc526579faa4cb 276 SMART SM00342 190 272 1.8E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0112 05bc211c09c24f1c91fc526579faa4cb 276 SUPERFAMILY SSF51215 18 133 3.14E-18 T 14-10-2018 IPR037923 Transcription regulator HTH-like TMO_a0112 05bc211c09c24f1c91fc526579faa4cb 276 Gene3D G3DSA:2.60.120.10 4 95 1.7E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_a0112 05bc211c09c24f1c91fc526579faa4cb 276 Pfam PF12833 Helix-turn-helix domain 196 271 1.0E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0112 05bc211c09c24f1c91fc526579faa4cb 276 SUPERFAMILY SSF46689 176 224 1.7E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2979 efa021097931eb0b20d33f67aa5fff16 265 Pfam PF13531 Bacterial extracellular solute-binding protein 29 260 2.5E-45 T 14-10-2018 TMO_2979 efa021097931eb0b20d33f67aa5fff16 265 Gene3D G3DSA:3.40.190.10 105 221 4.8E-67 T 14-10-2018 TMO_2979 efa021097931eb0b20d33f67aa5fff16 265 SUPERFAMILY SSF53850 28 262 3.21E-56 T 14-10-2018 TMO_2979 efa021097931eb0b20d33f67aa5fff16 265 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 259 8.6E-53 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 TMO_2979 efa021097931eb0b20d33f67aa5fff16 265 PIRSF PIRSF004846 1 264 2.5E-61 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 TMO_2979 efa021097931eb0b20d33f67aa5fff16 265 Gene3D G3DSA:3.40.190.10 31 259 4.8E-67 T 14-10-2018 TMO_1879 31292ca9cd6d5bf6dc78c75a0d53ea46 496 PIRSF PIRSF000485 24 488 5.8E-171 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TMO_1879 31292ca9cd6d5bf6dc78c75a0d53ea46 496 SUPERFAMILY SSF56235 28 254 7.12E-72 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_1879 31292ca9cd6d5bf6dc78c75a0d53ea46 496 Gene3D G3DSA:3.40.50.2020 287 451 6.1E-160 T 14-10-2018 TMO_1879 31292ca9cd6d5bf6dc78c75a0d53ea46 496 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 28 473 8.3E-157 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TMO_1879 31292ca9cd6d5bf6dc78c75a0d53ea46 496 Pfam PF13522 Glutamine amidotransferase domain 84 221 2.6E-21 T 14-10-2018 TMO_1879 31292ca9cd6d5bf6dc78c75a0d53ea46 496 SUPERFAMILY SSF53271 262 481 6.29E-74 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like TMO_1879 31292ca9cd6d5bf6dc78c75a0d53ea46 496 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 27 473 47.06 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TMO_1879 31292ca9cd6d5bf6dc78c75a0d53ea46 496 Pfam PF00156 Phosphoribosyl transferase domain 288 397 1.8E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TMO_1879 31292ca9cd6d5bf6dc78c75a0d53ea46 496 Gene3D G3DSA:3.60.20.10 28 474 6.1E-160 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_a0564 53714e403c1870bd562b2fe7021c8139 333 SUPERFAMILY SSF53850 34 291 2.35E-17 T 14-10-2018 TMO_a0564 53714e403c1870bd562b2fe7021c8139 333 Gene3D G3DSA:3.40.190.10 134 282 4.2E-18 T 14-10-2018 TMO_a0564 53714e403c1870bd562b2fe7021c8139 333 Gene3D G3DSA:3.40.190.10 39 289 4.2E-18 T 14-10-2018 TMO_1582 798c17e20bca747d124f2d660821ef41 233 SUPERFAMILY SSF56784 11 231 6.84E-47 T 14-10-2018 IPR036412 HAD-like superfamily TMO_1582 798c17e20bca747d124f2d660821ef41 233 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 14 195 1.2E-31 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1582 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 1.0E-33 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1582 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 115 128 1.0E-33 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1582 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 162 1.0E-33 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1582 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 1.0E-33 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1582 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 1.0E-33 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1582 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 39 52 1.0E-33 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1582 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 53 66 1.0E-33 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1582 798c17e20bca747d124f2d660821ef41 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 92 202 1.7E-13 T 14-10-2018 TMO_1582 798c17e20bca747d124f2d660821ef41 233 Gene3D G3DSA:1.10.150.240 25 100 3.8E-66 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TMO_1582 798c17e20bca747d124f2d660821ef41 233 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 11 206 1.6E-62 T 14-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 TMO_1582 798c17e20bca747d124f2d660821ef41 233 Gene3D G3DSA:3.40.50.1000 13 216 3.8E-66 T 14-10-2018 IPR023214 HAD superfamily TMO_a0232 5a8a9a8ae18da6d35bc66e61be7ab4d1 410 Pfam PF02803 Thiolase, C-terminal domain 283 378 1.7E-7 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_a0232 5a8a9a8ae18da6d35bc66e61be7ab4d1 410 Pfam PF00108 Thiolase, N-terminal domain 5 207 1.9E-16 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_a0232 5a8a9a8ae18da6d35bc66e61be7ab4d1 410 PIRSF PIRSF000429 1 406 1.1E-58 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_a0232 5a8a9a8ae18da6d35bc66e61be7ab4d1 410 SUPERFAMILY SSF53901 271 394 6.11E-27 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0232 5a8a9a8ae18da6d35bc66e61be7ab4d1 410 SUPERFAMILY SSF53901 4 254 5.51E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0232 5a8a9a8ae18da6d35bc66e61be7ab4d1 410 Gene3D G3DSA:3.40.47.10 1 406 2.4E-108 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 608 738 6.8E-13 T 14-10-2018 IPR000014 PAS domain TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 SUPERFAMILY SSF55785 597 729 9.95E-19 T 14-10-2018 IPR035965 PAS domain superfamily TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 SMART SM00091 743 811 11.0 T 14-10-2018 IPR000014 PAS domain TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 SMART SM00091 612 683 4.8E-4 T 14-10-2018 IPR000014 PAS domain TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Pfam PF13426 PAS domain 69 173 0.53 T 14-10-2018 IPR000014 PAS domain TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 SUPERFAMILY SSF55785 752 857 1.05E-20 T 14-10-2018 IPR035965 PAS domain superfamily TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Gene3D G3DSA:3.30.450.20 739 811 4.4E-21 T 14-10-2018 TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Gene3D G3DSA:3.30.565.10 945 1087 7.0E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 SMART SM00911 872 954 1.9E-21 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Pfam PF13188 PAS domain 361 420 0.0069 T 14-10-2018 IPR000014 PAS domain TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Gene3D G3DSA:3.30.450.20 602 729 8.3E-25 T 14-10-2018 TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 SUPERFAMILY SSF55785 388 479 7.68E-7 T 14-10-2018 IPR035965 PAS domain superfamily TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 SMART SM00086 817 859 0.01 T 14-10-2018 IPR001610 PAC motif TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 SMART SM00086 688 731 0.029 T 14-10-2018 IPR001610 PAC motif TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 SMART SM00086 131 175 210.0 T 14-10-2018 IPR001610 PAC motif TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 SMART SM00086 558 600 3.6E-4 T 14-10-2018 IPR001610 PAC motif TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 SUPERFAMILY SSF55785 469 598 1.24E-13 T 14-10-2018 IPR035965 PAS domain superfamily TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Gene3D G3DSA:3.30.450.20 484 598 7.7E-16 T 14-10-2018 TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Pfam PF07536 HWE histidine kinase 872 954 5.8E-16 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Gene3D G3DSA:2.10.70.100 814 861 2.2E-13 T 14-10-2018 TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Gene3D G3DSA:3.30.450.20 49 186 5.1E-11 T 14-10-2018 TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Gene3D G3DSA:3.30.450.20 347 483 2.6E-16 T 14-10-2018 TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Pfam PF08447 PAS fold 530 592 7.5E-9 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Pfam PF08447 PAS fold 636 724 3.3E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_b0229 c4b9290bde67d7ae38e4de8b41504612 1107 Pfam PF08447 PAS fold 765 852 6.0E-22 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_1768 915d0e20bd12a2b50ea63a18b18d9911 396 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 8 387 8.2E-85 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 TMO_1768 915d0e20bd12a2b50ea63a18b18d9911 396 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 388 34.324 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 TMO_1768 915d0e20bd12a2b50ea63a18b18d9911 396 Pfam PF02684 Lipid-A-disaccharide synthetase 9 353 1.4E-99 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 TMO_1768 915d0e20bd12a2b50ea63a18b18d9911 396 SUPERFAMILY SSF53756 9 339 1.19E-33 T 14-10-2018 TMO_1768 915d0e20bd12a2b50ea63a18b18d9911 396 Gene3D G3DSA:3.40.50.2000 180 362 1.2E-5 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 2752 2844 1.05E-6 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 4662 4752 1.3E-5 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 2850 2937 1.2E-5 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 2856 2937 1.11E-5 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.80.10.50 1380 1511 2.1E-9 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 3044 3128 1.83E-8 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 4862 4943 3.66E-8 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 2477 2561 7.71E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1356 1401 2.8E-8 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 894 939 3.7E-7 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1468 1512 1.5E-14 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1577 1627 1.7E-6 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 836 886 4.0E-11 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1542 1570 3.1E-4 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1411 1461 9.9E-7 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1293 1344 1.1E-9 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 781 827 4.1E-8 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 645 673 4.1E-7 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 3434 3516 7.46E-9 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 4192 4274 1.96E-8 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 3124 3241 4.71E-10 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF63829 616 910 7.85E-9 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 1357 1392 0.019 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 1320 1335 0.046 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 642 663 0.034 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 842 879 6.3E-7 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 1418 1451 0.0021 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 899 932 0.025 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 1473 1503 5.2E-6 T 14-10-2018 IPR013431 Delta-60 repeat TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 4473 4558 1.26E-10 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 4671 4750 4.19E-5 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 4287 4366 8.11E-8 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 5235 5320 7.46E-10 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 3243 3323 4.32E-5 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 5426 5505 1.13E-8 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 4561 4655 1.4E-7 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 3898 3988 1.9E-8 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 4853 4942 3.6E-7 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 2468 2561 1.2E-8 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 5040 5128 1.3E-8 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 5418 5505 6.9E-9 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 4280 4366 9.7E-8 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 3715 3801 2.49E-9 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 5048 5128 2.88E-8 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 4095 4180 4.58E-10 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 3134 3228 4.2E-9 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 2667 2748 1.7E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 3813 3895 1.57E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 4570 4655 6.81E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00736 3425 3520 0.23 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00736 3809 3899 0.069 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00736 5334 5417 0.041 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00736 4183 4278 0.014 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00736 4842 4946 0.012 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00736 2653 2753 0.022 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00736 4571 4659 0.096 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00736 3706 3805 0.23 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00736 4464 4562 0.15 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00736 3132 3231 0.097 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Pfam PF16184 Cadherin-like 1972 2069 1.3E-20 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 3529 3609 6.54E-9 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 4949 5039 8.0E-5 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 2661 2753 1.5E-8 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 4090 4184 2.7E-12 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 3807 3897 2.2E-9 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 2754 2848 2.1E-6 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 3522 3611 6.5E-9 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 3038 3133 2.3E-9 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 3427 3520 1.5E-11 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 4470 4560 1.3E-13 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 5233 5324 4.3E-12 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 3709 3805 1.2E-10 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 5327 5417 1.2E-7 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 Gene3D G3DSA:2.60.40.60 4186 4278 1.9E-9 T 14-10-2018 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 5333 5413 4.71E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 3542 3615 1.5E-5 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 5248 5325 6.1E-12 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 4681 4756 0.004 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 4389 4465 0.17 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 2584 2660 0.022 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 2870 2943 0.014 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 2491 2567 0.0013 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 3057 3134 5.9E-9 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 4486 4563 8.5E-13 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 4005 4087 0.17 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 3729 3806 2.1E-8 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 3155 3232 7.4E-8 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 3827 3900 2.3E-8 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 4206 4279 8.7E-9 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 4968 5040 0.035 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 5528 5604 0.54 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 2681 2754 5.2E-6 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 3448 3521 2.3E-8 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 4584 4660 1.6E-5 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 3921 3994 1.3E-8 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 3632 3708 0.29 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 3253 3328 0.0083 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 5151 5227 0.096 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 5439 5511 8.6E-7 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 5061 5134 0.015 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 4874 4947 1.2E-7 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 2776 2849 0.004 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 5346 5418 5.4E-7 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 4108 4185 5.3E-11 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SMART SM00112 4300 4372 3.0E-5 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 PRINTS PR00205 Cadherin signature 3946 3972 5.2E-8 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 PRINTS PR00205 Cadherin signature 3775 3787 5.2E-8 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 PRINTS PR00205 Cadherin signature 3707 3736 5.2E-8 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 PRINTS PR00205 Cadherin signature 3787 3806 5.2E-8 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 PRINTS PR00205 Cadherin signature 3978 3995 5.2E-8 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0895 145cc189669c1581d0af62c90c63f412 5610 SUPERFAMILY SSF49313 3908 3988 3.93E-9 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0636 e2d0b3e3f62d3dae0bfa9005866fa736 543 Pfam PF00128 Alpha amylase, catalytic domain 26 380 2.9E-82 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_c0636 e2d0b3e3f62d3dae0bfa9005866fa736 543 SUPERFAMILY SSF51445 2 465 6.18E-128 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_c0636 e2d0b3e3f62d3dae0bfa9005866fa736 543 Gene3D G3DSA:3.90.400.10 103 173 2.6E-169 T 14-10-2018 TMO_c0636 e2d0b3e3f62d3dae0bfa9005866fa736 543 SMART SM00642 11 406 1.6E-109 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_c0636 e2d0b3e3f62d3dae0bfa9005866fa736 543 Gene3D G3DSA:3.20.20.80 3 460 2.6E-169 T 14-10-2018 TMO_2257 8db76d84142f9fa9de65930e495857ad 256 Pfam PF01259 SAICAR synthetase 7 235 5.7E-63 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_2257 8db76d84142f9fa9de65930e495857ad 256 Gene3D G3DSA:3.30.470.20 85 224 9.1E-96 T 14-10-2018 TMO_2257 8db76d84142f9fa9de65930e495857ad 256 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 31.997 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_2257 8db76d84142f9fa9de65930e495857ad 256 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_2257 8db76d84142f9fa9de65930e495857ad 256 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_2257 8db76d84142f9fa9de65930e495857ad 256 Gene3D G3DSA:3.30.200.20 7 235 9.1E-96 T 14-10-2018 TMO_2257 8db76d84142f9fa9de65930e495857ad 256 SUPERFAMILY SSF56104 5 236 1.8E-78 T 14-10-2018 TMO_2257 8db76d84142f9fa9de65930e495857ad 256 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 237 2.8E-63 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 TMO_b0471 7c40c997f06f3623a6cb7c7cdcd2cc3f 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.3E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0471 7c40c997f06f3623a6cb7c7cdcd2cc3f 305 Gene3D G3DSA:3.40.190.290 94 302 5.3E-34 T 14-10-2018 TMO_b0471 7c40c997f06f3623a6cb7c7cdcd2cc3f 305 Gene3D G3DSA:1.10.10.10 3 91 2.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0471 7c40c997f06f3623a6cb7c7cdcd2cc3f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0471 7c40c997f06f3623a6cb7c7cdcd2cc3f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0471 7c40c997f06f3623a6cb7c7cdcd2cc3f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0471 7c40c997f06f3623a6cb7c7cdcd2cc3f 305 SUPERFAMILY SSF53850 93 298 1.09E-35 T 14-10-2018 TMO_b0471 7c40c997f06f3623a6cb7c7cdcd2cc3f 305 Pfam PF03466 LysR substrate binding domain 94 295 9.3E-35 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0471 7c40c997f06f3623a6cb7c7cdcd2cc3f 305 SUPERFAMILY SSF46785 2 81 1.85E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 Gene3D G3DSA:3.40.50.1980 31 232 1.1E-125 T 14-10-2018 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 SUPERFAMILY SSF53720 24 429 3.92E-89 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 41.674 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 PIRSF PIRSF000099 6 431 3.9E-161 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 5.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 5.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 5.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 5.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 5.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 5.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 5.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 5.4E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 427 5.7E-161 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 Gene3D G3DSA:3.40.50.1980 234 350 1.1E-125 T 14-10-2018 TMO_1002 0a0e556bfa907624c63068f143cbbe93 433 Pfam PF00815 Histidinol dehydrogenase 24 428 1.1E-167 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 SUPERFAMILY SSF50465 288 383 1.09E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 384 57.429 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 Gene3D G3DSA:2.40.30.10 291 383 3.0E-42 T 14-10-2018 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 39 54 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 Gene3D G3DSA:2.40.30.10 197 290 5.5E-39 T 14-10-2018 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 PRINTS PR00315 GTP-binding elongation factor signature 2 15 8.9E-26 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 PRINTS PR00315 GTP-binding elongation factor signature 119 128 8.9E-26 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 PRINTS PR00315 GTP-binding elongation factor signature 46 54 8.9E-26 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 PRINTS PR00315 GTP-binding elongation factor signature 66 76 8.9E-26 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 PRINTS PR00315 GTP-binding elongation factor signature 82 93 8.9E-26 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 Pfam PF03143 Elongation factor Tu C-terminal domain 288 382 3.9E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 383 2.3E-222 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 Pfam PF03144 Elongation factor Tu domain 2 215 283 7.9E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 Gene3D G3DSA:3.40.50.300 1 193 6.2E-69 T 14-10-2018 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 135 1.2E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 SUPERFAMILY SSF52540 1 216 1.39E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 Pfam PF00009 Elongation factor Tu GTP binding domain 1 191 7.0E-59 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2647 747e15abe121a0ad8f7f93d64dca2504 384 SUPERFAMILY SSF50447 195 291 4.52E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 Gene3D G3DSA:3.30.565.10 513 677 6.4E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 SUPERFAMILY SSF47384 428 513 1.04E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 SMART SM00387 558 675 5.6E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 673 3.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 SMART SM00091 310 377 0.5 T 14-10-2018 IPR000014 PAS domain TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 SMART SM00091 181 252 18.0 T 14-10-2018 IPR000014 PAS domain TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 Pfam PF12860 PAS fold 187 301 6.0E-13 T 14-10-2018 TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 Pfam PF12860 PAS fold 317 428 3.1E-10 T 14-10-2018 TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 616 7.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 653 7.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 630 7.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 672 7.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 SUPERFAMILY SSF55785 294 412 2.09E-7 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 SUPERFAMILY SSF55874 501 675 1.83E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 SMART SM00388 444 512 2.6E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 Gene3D G3DSA:1.10.287.130 433 512 1.7E-21 T 14-10-2018 TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 Gene3D G3DSA:3.30.450.20 167 304 1.6E-7 T 14-10-2018 TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 SUPERFAMILY SSF55785 165 284 2.79E-9 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 Gene3D G3DSA:3.30.450.20 310 432 7.6E-8 T 14-10-2018 TMO_0169 6e758d110da95fb43fdb2befaabf2fdf 691 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 512 7.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0523 899604c498ec46f84818700f4ac8c378 362 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 85 200 4.6E-11 T 14-10-2018 TMO_b0523 899604c498ec46f84818700f4ac8c378 362 Gene3D G3DSA:2.70.160.11 204 345 4.8E-8 T 14-10-2018 TMO_b0523 899604c498ec46f84818700f4ac8c378 362 SUPERFAMILY SSF53335 66 356 4.98E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_b0523 899604c498ec46f84818700f4ac8c378 362 Gene3D G3DSA:3.40.50.150 57 201 4.3E-45 T 14-10-2018 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 536 545 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 SUPERFAMILY SSF46689 536 651 6.45E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 349 362 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 Pfam PF02954 Bacterial regulatory protein, Fis family 622 650 3.0E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 635 653 5.3E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 618 635 5.3E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 Gene3D G3DSA:1.10.8.60 506 572 5.3E-12 T 14-10-2018 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 Gene3D G3DSA:3.30.450.40 21 207 1.1E-47 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 Gene3D G3DSA:1.10.10.60 601 652 1.7E-13 T 14-10-2018 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 Pfam PF00158 Sigma-54 interaction domain 334 492 2.0E-62 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 Gene3D G3DSA:3.40.50.300 315 497 1.0E-58 T 14-10-2018 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 SUPERFAMILY SSF52540 330 567 3.0E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 412 427 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 Pfam PF01590 GAF domain 71 197 1.8E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_2933 e4f0aa1caed8a6be570b06204fad27d7 653 SMART SM00382 345 489 7.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0359 071855ae02000a099f4aaa23483e0a11 86 SUPERFAMILY SSF52833 3 84 2.89E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_0359 071855ae02000a099f4aaa23483e0a11 86 Pfam PF00462 Glutaredoxin 4 64 8.8E-21 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TMO_0359 071855ae02000a099f4aaa23483e0a11 86 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 5.0E-36 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 TMO_0359 071855ae02000a099f4aaa23483e0a11 86 PRINTS PR00160 Glutaredoxin signature 47 60 5.7E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup TMO_0359 071855ae02000a099f4aaa23483e0a11 86 PRINTS PR00160 Glutaredoxin signature 61 74 5.7E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup TMO_0359 071855ae02000a099f4aaa23483e0a11 86 PRINTS PR00160 Glutaredoxin signature 4 22 5.7E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup TMO_0359 071855ae02000a099f4aaa23483e0a11 86 Gene3D G3DSA:3.40.30.10 2 84 8.2E-29 T 14-10-2018 TMO_0359 071855ae02000a099f4aaa23483e0a11 86 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Gene3D G3DSA:2.150.10.10 265 452 1.2E-31 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Gene3D G3DSA:2.150.10.10 152 264 4.1E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 119 137 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 PRINTS PR00313 NodO calcium binding signature 123 131 5.5E-10 T 14-10-2018 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 PRINTS PR00313 NodO calcium binding signature 248 257 5.5E-10 T 14-10-2018 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 PRINTS PR00313 NodO calcium binding signature 39 50 5.5E-10 T 14-10-2018 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 PRINTS PR00313 NodO calcium binding signature 105 113 5.5E-10 T 14-10-2018 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 SUPERFAMILY SSF51120 153 298 1.07E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Gene3D G3DSA:2.150.10.10 53 95 9.2E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Gene3D G3DSA:2.150.10.10 96 151 3.1E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Gene3D G3DSA:2.150.10.10 2 52 1.0E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 110 128 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 SUPERFAMILY SSF51120 9 142 1.96E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 244 262 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 SUPERFAMILY SSF51120 262 445 2.09E-24 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 257 272 30.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 221 237 57.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 5 22 0.14 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 323 339 0.0011 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 304 321 0.005 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 33 49 0.0017 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 340 357 0.037 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 239 255 0.006 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 51 67 0.35 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 87 103 0.017 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 122 139 0.0018 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 68 85 0.019 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF08548 Peptidase M10 serralysin C terminal 298 447 1.3E-9 T 14-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 TMO_1315 4c14d8e785445b595a69e12f6472ba0e 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 328 346 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_b0232 bc4592af927f6494b85d7922b73c58fe 587 Pfam PF13395 HNH endonuclease 452 505 8.8E-5 T 14-10-2018 IPR003615 HNH nuclease TMO_b0232 bc4592af927f6494b85d7922b73c58fe 587 Pfam PF03235 Protein of unknown function DUF262 8 255 1.9E-33 T 14-10-2018 IPR004919 Domain of unknown function DUF262 TMO_2777 e5e60bb20af89b62e99d84e3c2c6b7de 385 Pfam PF01903 CbiX 15 129 2.6E-24 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 TMO_2777 e5e60bb20af89b62e99d84e3c2c6b7de 385 Pfam PF01903 CbiX 163 266 5.7E-19 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 TMO_2777 e5e60bb20af89b62e99d84e3c2c6b7de 385 SUPERFAMILY SSF53800 8 274 2.07E-60 T 14-10-2018 TMO_2777 e5e60bb20af89b62e99d84e3c2c6b7de 385 Gene3D G3DSA:3.40.50.1400 6 142 8.8E-26 T 14-10-2018 TMO_2777 e5e60bb20af89b62e99d84e3c2c6b7de 385 Gene3D G3DSA:3.40.50.1400 153 275 5.8E-19 T 14-10-2018 TMO_c0678 0ef64d3040ff2a3834dc40758e7ed174 714 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 339 696 7.6E-87 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 TMO_c0678 0ef64d3040ff2a3834dc40758e7ed174 714 Gene3D G3DSA:3.30.420.40 475 658 1.1E-101 T 14-10-2018 TMO_c0678 0ef64d3040ff2a3834dc40758e7ed174 714 Gene3D G3DSA:3.30.420.40 339 687 1.1E-101 T 14-10-2018 TMO_c0678 0ef64d3040ff2a3834dc40758e7ed174 714 Gene3D G3DSA:3.40.50.720 6 296 1.0E-55 T 14-10-2018 TMO_c0678 0ef64d3040ff2a3834dc40758e7ed174 714 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 168 8.9E-19 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TMO_c0678 0ef64d3040ff2a3834dc40758e7ed174 714 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 336 698 35.247 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 TMO_c0678 0ef64d3040ff2a3834dc40758e7ed174 714 SUPERFAMILY SSF51735 1 301 6.08E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0678 0ef64d3040ff2a3834dc40758e7ed174 714 SUPERFAMILY SSF53067 339 668 8.63E-17 T 14-10-2018 TMO_c0678 0ef64d3040ff2a3834dc40758e7ed174 714 Gene3D G3DSA:3.90.25.10 168 303 1.0E-55 T 14-10-2018 TMO_3302 abeab06676f24b169c84c2f892e2825c 260 SUPERFAMILY SSF51695 20 256 8.63E-64 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TMO_3302 abeab06676f24b169c84c2f892e2825c 260 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 24 253 2.1E-42 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 TMO_3302 abeab06676f24b169c84c2f892e2825c 260 Gene3D G3DSA:3.20.20.190 14 258 6.5E-73 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 2.0E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 2.0E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 133 152 2.0E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 188 208 2.0E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 2.0E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 Pfam PF06723 MreB/Mbl protein 11 339 2.0E-151 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 Gene3D G3DSA:3.30.420.40 155 320 1.8E-134 T 14-10-2018 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 Gene3D G3DSA:3.90.640.10 187 262 1.8E-134 T 14-10-2018 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 Gene3D G3DSA:3.30.420.40 13 330 1.8E-134 T 14-10-2018 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 SUPERFAMILY SSF53067 150 334 7.6E-47 T 14-10-2018 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 SUPERFAMILY SSF53067 10 149 1.5E-39 T 14-10-2018 TMO_0761 d557330feaa9df377124ce37b6e9bae9 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 4.0E-158 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TMO_2749 3aa8ea32e34b09d6f103e87a0bd340de 391 Gene3D G3DSA:3.90.79.10 248 382 1.7E-10 T 14-10-2018 TMO_2749 3aa8ea32e34b09d6f103e87a0bd340de 391 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 61 179 3.0E-16 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TMO_2749 3aa8ea32e34b09d6f103e87a0bd340de 391 Pfam PF00633 Helix-hairpin-helix motif 125 153 2.8E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 TMO_2749 3aa8ea32e34b09d6f103e87a0bd340de 391 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 215 231 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 TMO_2749 3aa8ea32e34b09d6f103e87a0bd340de 391 SMART SM00478 64 213 2.1E-47 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TMO_2749 3aa8ea32e34b09d6f103e87a0bd340de 391 Gene3D G3DSA:1.10.340.30 42 157 4.4E-80 T 14-10-2018 TMO_2749 3aa8ea32e34b09d6f103e87a0bd340de 391 ProSitePatterns PS01155 Endonuclease III family signature. 127 156 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 TMO_2749 3aa8ea32e34b09d6f103e87a0bd340de 391 SUPERFAMILY SSF48150 27 244 3.14E-68 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TMO_2749 3aa8ea32e34b09d6f103e87a0bd340de 391 Pfam PF14815 NUDIX domain 259 378 1.6E-18 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 TMO_2749 3aa8ea32e34b09d6f103e87a0bd340de 391 Gene3D G3DSA:1.10.1670.10 31 235 4.4E-80 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TMO_2749 3aa8ea32e34b09d6f103e87a0bd340de 391 SUPERFAMILY SSF55811 243 380 1.2E-14 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TMO_1524 e88324ac1257c8ccff9ffca6086867ec 278 SMART SM00460 162 231 3.4E-23 T 14-10-2018 IPR002931 Transglutaminase-like TMO_1524 e88324ac1257c8ccff9ffca6086867ec 278 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 81 1.7E-23 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal TMO_1524 e88324ac1257c8ccff9ffca6086867ec 278 Pfam PF01841 Transglutaminase-like superfamily 119 229 1.0E-27 T 14-10-2018 IPR002931 Transglutaminase-like TMO_1524 e88324ac1257c8ccff9ffca6086867ec 278 SUPERFAMILY SSF54001 7 260 1.28E-45 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TMO_1524 e88324ac1257c8ccff9ffca6086867ec 278 Gene3D G3DSA:3.10.620.30 71 265 1.4E-46 T 14-10-2018 TMO_1951 a29f8525258583213ee24a41464eba52 415 Pfam PF02687 FtsX-like permease family 301 408 4.4E-14 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TMO_1951 a29f8525258583213ee24a41464eba52 415 Pfam PF12704 MacB-like periplasmic core domain 29 241 2.9E-16 T 14-10-2018 IPR025857 MacB-like periplasmic core domain TMO_1951 a29f8525258583213ee24a41464eba52 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 415 8.3E-140 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 TMO_0069 b5894e5ae4133485dfee76c7cd228143 139 Pfam PF14354 Restriction alleviation protein Lar 7 64 1.2E-9 T 14-10-2018 TMO_3139 86b2794d650c3f1d2fe87ba6be5d8fd6 441 SUPERFAMILY SSF111352 36 412 4.18E-103 T 14-10-2018 TMO_3139 86b2794d650c3f1d2fe87ba6be5d8fd6 441 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 35 434 4.2E-174 T 14-10-2018 IPR019879 Ammonium transporter, marine subtype TMO_3139 86b2794d650c3f1d2fe87ba6be5d8fd6 441 Pfam PF00909 Ammonium Transporter Family 42 431 1.5E-101 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 TMO_3139 86b2794d650c3f1d2fe87ba6be5d8fd6 441 ProSitePatterns PS01219 Ammonium transporters signature. 192 217 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 TMO_3139 86b2794d650c3f1d2fe87ba6be5d8fd6 441 Gene3D G3DSA:1.10.3430.10 22 439 6.8E-124 T 14-10-2018 IPR029020 Ammonium/urea transporter TMO_3139 86b2794d650c3f1d2fe87ba6be5d8fd6 441 TIGRFAM TIGR00836 amt: ammonium transporter 41 431 1.2E-104 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 70 88 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 291 376 3.4E-10 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 Gene3D G3DSA:3.20.20.10 67 285 1.3E-84 T 14-10-2018 IPR029066 PLP-binding barrel TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 Gene3D G3DSA:2.40.37.10 286 389 1.3E-84 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 SUPERFAMILY SSF50621 256 397 1.63E-32 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 PRINTS PR01182 Ornithine decarboxylase signature 364 377 3.2E-10 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 PRINTS PR01182 Ornithine decarboxylase signature 343 353 3.2E-10 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 PRINTS PR01182 Ornithine decarboxylase signature 308 321 3.2E-10 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 PRINTS PR01182 Ornithine decarboxylase signature 68 95 3.2E-10 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 58 287 2.1E-42 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 377 390 3.6E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 91 103 3.6E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 194 207 3.6E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 70 88 3.6E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 277 296 3.6E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_1614 c2d6a73b62011bd4bb9ac688fe6973b8 420 SUPERFAMILY SSF51419 43 288 3.49E-48 T 14-10-2018 IPR029066 PLP-binding barrel TMO_0484 4c20ede9bd8e4a82f89e0c3149049fe4 449 Pfam PF04055 Radical SAM superfamily 178 327 3.2E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_0484 4c20ede9bd8e4a82f89e0c3149049fe4 449 SUPERFAMILY SSF102114 164 362 4.71E-22 T 14-10-2018 TMO_0484 4c20ede9bd8e4a82f89e0c3149049fe4 449 SMART SM00729 170 374 6.9E-5 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_0484 4c20ede9bd8e4a82f89e0c3149049fe4 449 Gene3D G3DSA:3.20.20.70 166 420 5.4E-10 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1863 778ac83a3f5bb8d9a8f678edfc576af8 419 PIRSF PIRSF000447 1 419 4.7E-193 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TMO_1863 778ac83a3f5bb8d9a8f678edfc576af8 419 SUPERFAMILY SSF53901 221 418 2.98E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1863 778ac83a3f5bb8d9a8f678edfc576af8 419 Gene3D G3DSA:3.40.47.10 263 407 1.6E-56 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1863 778ac83a3f5bb8d9a8f678edfc576af8 419 SUPERFAMILY SSF53901 1 260 1.22E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1863 778ac83a3f5bb8d9a8f678edfc576af8 419 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 415 3.8E-199 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TMO_1863 778ac83a3f5bb8d9a8f678edfc576af8 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 375 2.3E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TMO_1863 778ac83a3f5bb8d9a8f678edfc576af8 419 Gene3D G3DSA:3.40.47.10 1 261 4.0E-89 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1863 778ac83a3f5bb8d9a8f678edfc576af8 419 SMART SM00825 Beta-ketoacyl synthase 4 419 5.5E-17 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TMO_1863 778ac83a3f5bb8d9a8f678edfc576af8 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 253 3.3E-64 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TMO_1863 778ac83a3f5bb8d9a8f678edfc576af8 419 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site TMO_0377 bf90a0ef82693cd7ef324f66df2ea182 411 Pfam PF13413 Helix-turn-helix domain 42 99 4.3E-19 T 14-10-2018 TMO_0377 bf90a0ef82693cd7ef324f66df2ea182 411 Gene3D G3DSA:1.10.260.40 32 124 1.7E-23 T 14-10-2018 TMO_0377 bf90a0ef82693cd7ef324f66df2ea182 411 Pfam PF13464 Domain of unknown function (DUF4115) 328 398 4.0E-18 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 TMO_3083 896b90229765c5e554c976f3c604e418 178 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 8 173 1.8E-47 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 TMO_3083 896b90229765c5e554c976f3c604e418 178 Gene3D G3DSA:3.40.30.10 25 178 3.8E-40 T 14-10-2018 TMO_3083 896b90229765c5e554c976f3c604e418 178 SUPERFAMILY SSF52833 42 175 7.8E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_3083 896b90229765c5e554c976f3c604e418 178 Pfam PF08534 Redoxin 40 162 2.9E-13 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 TMO_3083 896b90229765c5e554c976f3c604e418 178 ProSitePatterns PS00194 Thioredoxin family active site. 68 86 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TMO_3278 fd4fe8a0b258f311bd13cd9c0388b5ad 591 Gene3D G3DSA:1.20.1560.10 4 315 2.9E-28 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_3278 fd4fe8a0b258f311bd13cd9c0388b5ad 591 SMART SM00382 359 545 1.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3278 fd4fe8a0b258f311bd13cd9c0388b5ad 591 SUPERFAMILY SSF52540 326 568 1.22E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3278 fd4fe8a0b258f311bd13cd9c0388b5ad 591 SUPERFAMILY SSF90123 6 316 5.76E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_3278 fd4fe8a0b258f311bd13cd9c0388b5ad 591 Pfam PF00005 ABC transporter 352 499 7.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3278 fd4fe8a0b258f311bd13cd9c0388b5ad 591 Gene3D G3DSA:3.40.50.300 326 576 1.3E-85 T 14-10-2018 TMO_3278 fd4fe8a0b258f311bd13cd9c0388b5ad 591 Pfam PF00664 ABC transporter transmembrane region 62 229 3.9E-11 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_3278 fd4fe8a0b258f311bd13cd9c0388b5ad 591 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0042 52ecf87c2d4b9d7d6ec03b6e4ce5d365 313 SUPERFAMILY SSF161098 93 298 3.71E-18 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0042 52ecf87c2d4b9d7d6ec03b6e4ce5d365 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 5.3E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0042 52ecf87c2d4b9d7d6ec03b6e4ce5d365 313 Gene3D G3DSA:1.10.3720.10 86 305 1.1E-22 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0490 a7fd1d0b07ed62990dfe80a8cf45eca3 557 SUPERFAMILY SSF48452 5 139 1.09E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_a0490 a7fd1d0b07ed62990dfe80a8cf45eca3 557 Gene3D G3DSA:3.40.50.11380 149 330 5.5E-45 T 14-10-2018 TMO_a0490 a7fd1d0b07ed62990dfe80a8cf45eca3 557 Gene3D G3DSA:3.40.50.2000 348 515 1.5E-31 T 14-10-2018 TMO_a0490 a7fd1d0b07ed62990dfe80a8cf45eca3 557 Pfam PF13844 Glycosyl transferase family 41 186 314 2.0E-17 T 14-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 TMO_a0490 a7fd1d0b07ed62990dfe80a8cf45eca3 557 Gene3D G3DSA:1.25.40.10 4 148 5.5E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_a0211 093a2218f588da027acf66f66325faba 634 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 84 605 3.7E-77 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TMO_a0211 093a2218f588da027acf66f66325faba 634 SUPERFAMILY SSF51445 84 618 1.26E-127 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_a0211 093a2218f588da027acf66f66325faba 634 Pfam PF02446 4-alpha-glucanotransferase 91 603 8.8E-99 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TMO_a0211 093a2218f588da027acf66f66325faba 634 Gene3D G3DSA:3.20.20.80 82 607 5.2E-115 T 14-10-2018 TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 Gene3D G3DSA:3.30.1360.200 200 339 6.3E-63 T 14-10-2018 TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 Pfam PF07549 SecD/SecF GG Motif 39 64 2.7E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 271 501 1.2E-81 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 47 508 9.6E-146 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 521 45.413 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 Gene3D G3DSA:1.20.1640.10 344 520 1.7E-10 T 14-10-2018 TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 PRINTS PR00702 Acriflavin resistance protein family signature 357 380 5.2E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 PRINTS PR00702 Acriflavin resistance protein family signature 410 434 5.2E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 PRINTS PR00702 Acriflavin resistance protein family signature 485 508 5.2E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 SUPERFAMILY SSF82866 256 516 3.53E-46 T 14-10-2018 TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 Pfam PF02355 Protein export membrane protein 343 512 9.7E-21 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TMO_1547 086c58264bb73f34c97e40046ecdad8a 522 Gene3D G3DSA:3.30.70.3400 140 343 6.3E-63 T 14-10-2018 TMO_1251 b7012e2820a42d6024c813789969bacd 425 SMART SM00387 305 418 6.7E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1251 b7012e2820a42d6024c813789969bacd 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 191 259 3.8E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1251 b7012e2820a42d6024c813789969bacd 425 SUPERFAMILY SSF47384 175 260 3.34E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_1251 b7012e2820a42d6024c813789969bacd 425 Gene3D G3DSA:1.10.287.130 147 254 8.0E-23 T 14-10-2018 TMO_1251 b7012e2820a42d6024c813789969bacd 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 306 417 6.6E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1251 b7012e2820a42d6024c813789969bacd 425 SMART SM00388 190 259 4.6E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1251 b7012e2820a42d6024c813789969bacd 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 7.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1251 b7012e2820a42d6024c813789969bacd 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 415 7.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1251 b7012e2820a42d6024c813789969bacd 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 7.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1251 b7012e2820a42d6024c813789969bacd 425 Gene3D G3DSA:3.30.565.10 255 417 2.9E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1251 b7012e2820a42d6024c813789969bacd 425 SUPERFAMILY SSF55874 248 420 6.29E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0500 8398879b7ba9cd2952e276b1ee9064fc 529 Gene3D G3DSA:3.30.300.310 419 523 5.9E-30 T 14-10-2018 TMO_a0500 8398879b7ba9cd2952e276b1ee9064fc 529 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 510 1.2E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0500 8398879b7ba9cd2952e276b1ee9064fc 529 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_a0500 8398879b7ba9cd2952e276b1ee9064fc 529 Gene3D G3DSA:3.40.50.12780 15 415 4.3E-102 T 14-10-2018 TMO_a0500 8398879b7ba9cd2952e276b1ee9064fc 529 Pfam PF00501 AMP-binding enzyme 21 423 1.1E-75 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0500 8398879b7ba9cd2952e276b1ee9064fc 529 SUPERFAMILY SSF56801 20 522 2.22E-131 T 14-10-2018 TMO_2665 908a747a470433e580d8bff2066acc5f 508 Pfam PF02321 Outer membrane efflux protein 83 269 1.1E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_2665 908a747a470433e580d8bff2066acc5f 508 Pfam PF02321 Outer membrane efflux protein 302 482 2.3E-31 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_2665 908a747a470433e580d8bff2066acc5f 508 SUPERFAMILY SSF56954 16 487 1.28E-113 T 14-10-2018 TMO_2665 908a747a470433e580d8bff2066acc5f 508 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 24 484 7.5E-114 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 TMO_2665 908a747a470433e580d8bff2066acc5f 508 Gene3D G3DSA:1.20.1600.10 72 485 4.0E-138 T 14-10-2018 TMO_2665 908a747a470433e580d8bff2066acc5f 508 Gene3D G3DSA:2.20.200.10 119 373 4.0E-138 T 14-10-2018 TMO_2628 ce87c42c05f2d19b86e822ca554e8531 92 Gene3D G3DSA:3.30.860.10 1 92 1.0E-37 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2628 ce87c42c05f2d19b86e822ca554e8531 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.4E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2628 ce87c42c05f2d19b86e822ca554e8531 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.4E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2628 ce87c42c05f2d19b86e822ca554e8531 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.4E-21 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2628 ce87c42c05f2d19b86e822ca554e8531 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.367 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2628 ce87c42c05f2d19b86e822ca554e8531 92 Pfam PF00203 Ribosomal protein S19 3 83 1.3E-34 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2628 ce87c42c05f2d19b86e822ca554e8531 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2628 ce87c42c05f2d19b86e822ca554e8531 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 1.5E-41 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 TMO_2628 ce87c42c05f2d19b86e822ca554e8531 92 PIRSF PIRSF002144 1 92 1.2E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2628 ce87c42c05f2d19b86e822ca554e8531 92 SUPERFAMILY SSF54570 3 84 1.09E-34 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_1530 39e4a5b89a4236fa788fe00abc162a26 249 Pfam PF03741 Integral membrane protein TerC family 15 205 1.9E-46 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 TMO_0949 3078ec41771114093330f3f6dc709254 388 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 211 5.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0949 3078ec41771114093330f3f6dc709254 388 Gene3D G3DSA:1.10.287.130 108 210 5.7E-15 T 14-10-2018 TMO_0949 3078ec41771114093330f3f6dc709254 388 SMART SM00388 143 212 1.6E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0949 3078ec41771114093330f3f6dc709254 388 SUPERFAMILY SSF47384 132 212 1.61E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_3184 930df01d083bf8c157c6bb03211998da 412 SUPERFAMILY SSF57884 29 104 2.22E-29 T 14-10-2018 IPR035451 Ada-like domain superfamily TMO_3184 930df01d083bf8c157c6bb03211998da 412 Gene3D G3DSA:1.10.10.60 113 198 2.1E-7 T 14-10-2018 TMO_3184 930df01d083bf8c157c6bb03211998da 412 Pfam PF02805 Metal binding domain of Ada 33 96 9.9E-29 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 TMO_3184 930df01d083bf8c157c6bb03211998da 412 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 297 375 9.7E-28 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TMO_3184 930df01d083bf8c157c6bb03211998da 412 SUPERFAMILY SSF46767 297 377 2.35E-27 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 TMO_3184 930df01d083bf8c157c6bb03211998da 412 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 297 376 7.3E-29 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TMO_3184 930df01d083bf8c157c6bb03211998da 412 Gene3D G3DSA:3.40.10.10 26 97 1.0E-28 T 14-10-2018 IPR035451 Ada-like domain superfamily TMO_3184 930df01d083bf8c157c6bb03211998da 412 SUPERFAMILY SSF53155 210 293 2.16E-10 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TMO_3184 930df01d083bf8c157c6bb03211998da 412 Gene3D G3DSA:1.10.10.10 294 378 1.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3184 930df01d083bf8c157c6bb03211998da 412 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 346 352 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TMO_3184 930df01d083bf8c157c6bb03211998da 412 Pfam PF12833 Helix-turn-helix domain 126 201 1.3E-8 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_3184 930df01d083bf8c157c6bb03211998da 412 Gene3D G3DSA:3.30.160.70 199 293 7.2E-17 T 14-10-2018 TMO_1971 fb1ce34cc05538bd3f971ce4c3b454a2 337 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 57 72 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1971 fb1ce34cc05538bd3f971ce4c3b454a2 337 Pfam PF00146 NADH dehydrogenase 18 325 1.3E-133 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1971 fb1ce34cc05538bd3f971ce4c3b454a2 337 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 331 25.956 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1971 fb1ce34cc05538bd3f971ce4c3b454a2 337 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 212 225 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1437 6e6fd6e2bd3a71af229de39c54ec03fd 271 Pfam PF01728 FtsJ-like methyltransferase 73 252 3.6E-56 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 TMO_1437 6e6fd6e2bd3a71af229de39c54ec03fd 271 SUPERFAMILY SSF53335 72 253 8.76E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1437 6e6fd6e2bd3a71af229de39c54ec03fd 271 Gene3D G3DSA:3.40.50.150 72 259 1.8E-60 T 14-10-2018 TMO_1437 6e6fd6e2bd3a71af229de39c54ec03fd 271 PIRSF PIRSF005461 38 264 1.1E-74 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 TMO_1437 6e6fd6e2bd3a71af229de39c54ec03fd 271 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 57 253 31.393 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.5E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.5E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.5E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.5E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.5E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.5E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 249 2.5E-62 T 14-10-2018 TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 Gene3D G3DSA:3.40.50.720 1 251 8.7E-80 T 14-10-2018 TMO_c0839 34b5c169262b01cf97fdf3d07bc88ba4 252 SUPERFAMILY SSF51735 5 251 1.58E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0125 f2772ab679721b711369eecfde9789a8 736 SUPERFAMILY SSF46600 642 682 3.66E-10 T 14-10-2018 IPR036876 UVR domain superfamily TMO_c0125 f2772ab679721b711369eecfde9789a8 736 SUPERFAMILY SSF52540 57 605 7.37E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0125 f2772ab679721b711369eecfde9789a8 736 Gene3D G3DSA:4.10.860.10 641 686 9.0E-7 T 14-10-2018 TMO_c0125 f2772ab679721b711369eecfde9789a8 736 Gene3D G3DSA:3.40.50.300 439 620 1.5E-48 T 14-10-2018 TMO_c0125 f2772ab679721b711369eecfde9789a8 736 Hamap MF_00204 UvrABC system protein B [uvrB]. 27 683 41.984 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TMO_c0125 f2772ab679721b711369eecfde9789a8 736 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 29 680 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TMO_c0125 f2772ab679721b711369eecfde9789a8 736 SMART SM00490 484 570 2.1E-19 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_c0125 f2772ab679721b711369eecfde9789a8 736 Gene3D G3DSA:3.40.50.300 21 260 6.6E-78 T 14-10-2018 TMO_c0125 f2772ab679721b711369eecfde9789a8 736 Pfam PF12344 Ultra-violet resistance protein B 577 617 2.6E-20 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain TMO_c0125 f2772ab679721b711369eecfde9789a8 736 Pfam PF02151 UvrB/uvrC motif 652 681 2.6E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 TMO_c0125 f2772ab679721b711369eecfde9789a8 736 Gene3D G3DSA:3.40.50.300 300 438 2.3E-46 T 14-10-2018 TMO_c0125 f2772ab679721b711369eecfde9789a8 736 Pfam PF04851 Type III restriction enzyme, res subunit 38 163 2.6E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TMO_c0125 f2772ab679721b711369eecfde9789a8 736 SUPERFAMILY SSF52540 30 439 2.18E-131 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0125 f2772ab679721b711369eecfde9789a8 736 Pfam PF00271 Helicase conserved C-terminal domain 465 568 1.5E-17 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_c0125 f2772ab679721b711369eecfde9789a8 736 SMART SM00487 33 450 2.6E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_b0090 64d7d56e2a9c83c89c05209402dc823f 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 215 3.3E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0090 64d7d56e2a9c83c89c05209402dc823f 221 SUPERFAMILY SSF161098 16 209 1.23E-35 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0090 64d7d56e2a9c83c89c05209402dc823f 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 112 9.7E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_b0090 64d7d56e2a9c83c89c05209402dc823f 221 Gene3D G3DSA:1.10.3720.10 4 219 1.5E-44 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0382 4c6a17617ad1bd0d3e9ca58624077310 288 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 102 115 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site TMO_c0382 4c6a17617ad1bd0d3e9ca58624077310 288 Gene3D G3DSA:3.30.540.10 9 160 1.2E-32 T 14-10-2018 TMO_c0382 4c6a17617ad1bd0d3e9ca58624077310 288 Gene3D G3DSA:3.40.190.80 179 282 5.7E-15 T 14-10-2018 TMO_c0382 4c6a17617ad1bd0d3e9ca58624077310 288 Pfam PF00459 Inositol monophosphatase family 17 270 6.9E-39 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_c0382 4c6a17617ad1bd0d3e9ca58624077310 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 51 71 2.4E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_c0382 4c6a17617ad1bd0d3e9ca58624077310 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 230 254 2.4E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_c0382 4c6a17617ad1bd0d3e9ca58624077310 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 73 89 2.4E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_c0382 4c6a17617ad1bd0d3e9ca58624077310 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 102 118 2.4E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_c0382 4c6a17617ad1bd0d3e9ca58624077310 288 SUPERFAMILY SSF56655 17 282 2.62E-55 T 14-10-2018 TMO_c0830 acc56dda9d89f45cf0ffc7edf2b32a8c 213 PIRSF PIRSF006324 1 210 5.1E-59 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_c0830 acc56dda9d89f45cf0ffc7edf2b32a8c 213 Pfam PF01810 LysE type translocator 15 207 1.1E-32 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_b0166 905b4591ac33e7b95ba147164a22214c 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 9.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0166 905b4591ac33e7b95ba147164a22214c 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 9.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0166 905b4591ac33e7b95ba147164a22214c 194 SUPERFAMILY SSF46689 12 87 9.98E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0166 905b4591ac33e7b95ba147164a22214c 194 Gene3D G3DSA:1.10.357.10 5 192 9.7E-49 T 14-10-2018 TMO_b0166 905b4591ac33e7b95ba147164a22214c 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 67 9.3E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0166 905b4591ac33e7b95ba147164a22214c 194 SUPERFAMILY SSF48498 88 186 1.48E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1496 b6ef9baf3cf2633d64b9ae885ff7cd10 304 Pfam PF13602 Zinc-binding dehydrogenase 199 284 2.6E-6 T 14-10-2018 TMO_1496 b6ef9baf3cf2633d64b9ae885ff7cd10 304 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 5.8E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_1496 b6ef9baf3cf2633d64b9ae885ff7cd10 304 SUPERFAMILY SSF50129 8 141 3.14E-26 T 14-10-2018 IPR011032 GroES-like superfamily TMO_1496 b6ef9baf3cf2633d64b9ae885ff7cd10 304 SUPERFAMILY SSF51735 118 233 2.01E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1496 b6ef9baf3cf2633d64b9ae885ff7cd10 304 Gene3D G3DSA:3.90.180.10 19 289 1.1E-46 T 14-10-2018 TMO_1496 b6ef9baf3cf2633d64b9ae885ff7cd10 304 Gene3D G3DSA:3.40.50.720 129 251 1.1E-46 T 14-10-2018 TMO_1496 b6ef9baf3cf2633d64b9ae885ff7cd10 304 SMART SM00829 11 300 1.1E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_2538 81417f087867105850c568c043751aa8 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 9.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2538 81417f087867105850c568c043751aa8 198 Gene3D G3DSA:1.10.357.10 3 181 8.9E-17 T 14-10-2018 TMO_2538 81417f087867105850c568c043751aa8 198 SUPERFAMILY SSF46689 3 72 6.98E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0870 8e023457fa18fffa9af93627a963bfba 428 Gene3D G3DSA:3.40.50.300 34 269 1.6E-74 T 14-10-2018 TMO_0870 8e023457fa18fffa9af93627a963bfba 428 SMART SM00382 56 253 5.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0870 8e023457fa18fffa9af93627a963bfba 428 SUPERFAMILY SSF52540 42 274 3.06E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0870 8e023457fa18fffa9af93627a963bfba 428 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 39 407 1.9E-138 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 TMO_0870 8e023457fa18fffa9af93627a963bfba 428 Pfam PF00571 CBS domain 359 407 0.003 T 14-10-2018 IPR000644 CBS domain TMO_0870 8e023457fa18fffa9af93627a963bfba 428 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0870 8e023457fa18fffa9af93627a963bfba 428 SUPERFAMILY SSF54631 293 406 2.56E-12 T 14-10-2018 TMO_0870 8e023457fa18fffa9af93627a963bfba 428 Pfam PF00005 ABC transporter 48 195 2.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0870 8e023457fa18fffa9af93627a963bfba 428 Gene3D G3DSA:3.10.580.10 270 419 2.8E-8 T 14-10-2018 TMO_c0114 dce2e55c07599e7196fefcd38320585d 168 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 4.6E-18 T 14-10-2018 TMO_c0114 dce2e55c07599e7196fefcd38320585d 168 SMART SM00344 6 115 6.9E-43 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_c0114 dce2e55c07599e7196fefcd38320585d 168 Gene3D G3DSA:3.30.70.920 60 143 1.7E-25 T 14-10-2018 TMO_c0114 dce2e55c07599e7196fefcd38320585d 168 SUPERFAMILY SSF46785 5 66 3.79E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0114 dce2e55c07599e7196fefcd38320585d 168 Gene3D G3DSA:1.10.10.10 1 59 9.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0114 dce2e55c07599e7196fefcd38320585d 168 SUPERFAMILY SSF54909 66 155 3.62E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_c0114 dce2e55c07599e7196fefcd38320585d 168 Pfam PF01037 Lrp/AsnC ligand binding domain 73 145 5.4E-21 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_c0114 dce2e55c07599e7196fefcd38320585d 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 8.6E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0114 dce2e55c07599e7196fefcd38320585d 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 8.6E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0114 dce2e55c07599e7196fefcd38320585d 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 8.6E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_0646 ddec0eef4f02652249bfd01b9b0a0ee7 403 Gene3D G3DSA:1.10.540.10 1 131 1.4E-56 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_0646 ddec0eef4f02652249bfd01b9b0a0ee7 403 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 246 394 1.6E-36 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_0646 ddec0eef4f02652249bfd01b9b0a0ee7 403 SUPERFAMILY SSF56645 2 259 2.75E-69 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_0646 ddec0eef4f02652249bfd01b9b0a0ee7 403 Gene3D G3DSA:1.20.140.10 247 401 1.3E-40 T 14-10-2018 TMO_0646 ddec0eef4f02652249bfd01b9b0a0ee7 403 Gene3D G3DSA:2.40.110.10 132 246 2.4E-50 T 14-10-2018 TMO_0646 ddec0eef4f02652249bfd01b9b0a0ee7 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 234 1.5E-20 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_0646 ddec0eef4f02652249bfd01b9b0a0ee7 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 128 2.0E-15 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_0646 ddec0eef4f02652249bfd01b9b0a0ee7 403 SUPERFAMILY SSF47203 244 398 3.38E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_a0034 edfee977b1334c3d9ce48f38e8466b65 444 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 24 441 1.9E-160 T 14-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 TMO_a0034 edfee977b1334c3d9ce48f38e8466b65 444 Gene3D G3DSA:3.90.1580.10 192 444 2.0E-36 T 14-10-2018 TMO_a0034 edfee977b1334c3d9ce48f38e8466b65 444 SUPERFAMILY SSF56436 199 443 1.06E-64 T 14-10-2018 IPR016187 C-type lectin fold TMO_a0034 edfee977b1334c3d9ce48f38e8466b65 444 SUPERFAMILY SSF109854 6 159 2.01E-7 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TMO_a0034 edfee977b1334c3d9ce48f38e8466b65 444 Pfam PF12867 DinB superfamily 28 161 8.5E-12 T 14-10-2018 IPR024775 DinB-like domain TMO_a0034 edfee977b1334c3d9ce48f38e8466b65 444 Pfam PF03781 Sulfatase-modifying factor enzyme 1 361 441 2.0E-6 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TMO_a0034 edfee977b1334c3d9ce48f38e8466b65 444 Pfam PF03781 Sulfatase-modifying factor enzyme 1 205 345 1.1E-22 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TMO_d0057 85bea8196d9576ecd6e8da999f07a4e0 449 SUPERFAMILY SSF54637 26 155 1.92E-6 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_d0057 85bea8196d9576ecd6e8da999f07a4e0 449 Gene3D G3DSA:3.10.129.10 21 152 2.7E-6 T 14-10-2018 TMO_d0057 85bea8196d9576ecd6e8da999f07a4e0 449 Gene3D G3DSA:3.10.129.10 166 286 7.9E-12 T 14-10-2018 TMO_d0057 85bea8196d9576ecd6e8da999f07a4e0 449 Gene3D G3DSA:3.10.129.10 307 442 2.6E-21 T 14-10-2018 TMO_d0057 85bea8196d9576ecd6e8da999f07a4e0 449 SUPERFAMILY SSF54637 168 281 4.19E-14 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_d0057 85bea8196d9576ecd6e8da999f07a4e0 449 SUPERFAMILY SSF54637 310 447 2.89E-21 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_c0153 ca11a9f961980026dbbb0362c5351cf9 409 SUPERFAMILY SSF81342 12 274 5.18E-115 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 TMO_c0153 ca11a9f961980026dbbb0362c5351cf9 409 Pfam PF00033 Cytochrome b/b6/petB 29 215 4.6E-80 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 TMO_c0153 ca11a9f961980026dbbb0362c5351cf9 409 SUPERFAMILY SSF81648 275 391 1.2E-42 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 TMO_c0153 ca11a9f961980026dbbb0362c5351cf9 409 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 272 373 4.1E-42 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 TMO_c0153 ca11a9f961980026dbbb0362c5351cf9 409 Gene3D G3DSA:1.20.810.10 3 408 4.7E-168 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 TMO_c0153 ca11a9f961980026dbbb0362c5351cf9 409 PIRSF PIRSF038885 3 404 2.1E-202 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 370 9.8E-12 T 14-10-2018 IPR000014 PAS domain TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 249 7.4E-12 T 14-10-2018 IPR000014 PAS domain TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 125 1.7E-14 T 14-10-2018 IPR000014 PAS domain TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 Gene3D G3DSA:3.30.450.20 13 139 1.4E-18 T 14-10-2018 TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 SUPERFAMILY SSF55785 21 123 1.62E-20 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 Pfam PF08448 PAS fold 20 125 3.5E-13 T 14-10-2018 IPR013656 PAS fold-4 TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 Pfam PF08448 PAS fold 144 249 3.6E-12 T 14-10-2018 IPR013656 PAS fold-4 TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 Gene3D G3DSA:3.30.450.20 268 364 3.5E-18 T 14-10-2018 TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 SUPERFAMILY SSF55785 267 367 1.71E-23 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 SMART SM00283 352 568 1.2E-11 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 Gene3D G3DSA:3.30.450.20 140 267 4.8E-21 T 14-10-2018 TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 SMART SM00091 12 79 0.97 T 14-10-2018 IPR000014 PAS domain TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 SMART SM00091 255 323 2.0 T 14-10-2018 IPR000014 PAS domain TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 SMART SM00091 133 198 7.8 T 14-10-2018 IPR000014 PAS domain TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 Pfam PF08447 PAS fold 278 363 7.8E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 SMART SM00086 84 126 1.9 T 14-10-2018 IPR001610 PAC motif TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 SMART SM00086 328 370 0.098 T 14-10-2018 IPR001610 PAC motif TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 SMART SM00086 206 248 2.4E-6 T 14-10-2018 IPR001610 PAC motif TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 565 6.8E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 SUPERFAMILY SSF58104 367 564 1.44E-42 T 14-10-2018 TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 SUPERFAMILY SSF55785 144 249 2.79E-24 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0715 c761367aa422e27e11c2bf1a70692747 568 Gene3D G3DSA:1.10.287.950 365 568 5.0E-35 T 14-10-2018 TMO_1248 8e54226318ff7a81fb05200061d52ce7 567 Gene3D G3DSA:2.60.98.20 285 447 1.6E-13 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily TMO_1248 8e54226318ff7a81fb05200061d52ce7 567 SUPERFAMILY SSF117143 84 527 3.14E-61 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TMO_1248 8e54226318ff7a81fb05200061d52ce7 567 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TMO_1248 8e54226318ff7a81fb05200061d52ce7 567 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 487 564 1.6E-19 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TMO_1248 8e54226318ff7a81fb05200061d52ce7 567 Pfam PF07559 Flagellar basal body protein FlaE 323 446 6.6E-14 T 14-10-2018 IPR011491 Flagellar hook protein FlgE TMO_1248 8e54226318ff7a81fb05200061d52ce7 567 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 310 547 9.4E-44 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TMO_1248 8e54226318ff7a81fb05200061d52ce7 567 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 8 309 2.3E-45 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TMO_1248 8e54226318ff7a81fb05200061d52ce7 567 Pfam PF00460 Flagella basal body rod protein 9 39 3.1E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TMO_c0210 c7555a3866361e59b140d33758639264 248 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 246 2.6E-43 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_c0210 c7555a3866361e59b140d33758639264 248 SUPERFAMILY SSF52096 1 246 3.98E-61 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_c0210 c7555a3866361e59b140d33758639264 248 Gene3D G3DSA:3.90.226.10 1 248 8.1E-62 T 14-10-2018 TMO_c0210 c7555a3866361e59b140d33758639264 248 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 SUPERFAMILY SSF53738 263 370 8.63E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 Gene3D G3DSA:3.40.120.10 178 255 8.7E-28 T 14-10-2018 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 Gene3D G3DSA:3.40.120.10 257 374 1.4E-36 T 14-10-2018 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 SUPERFAMILY SSF53738 158 261 2.59E-25 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 138 1.1E-32 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 1.4E-20 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 1.4E-20 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 1.4E-20 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 210 223 1.4E-20 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 259 5.1E-21 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 Gene3D G3DSA:3.40.120.10 2 149 7.2E-46 T 14-10-2018 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 Gene3D G3DSA:3.30.310.50 375 464 2.9E-24 T 14-10-2018 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 SUPERFAMILY SSF53738 8 133 2.51E-36 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 SUPERFAMILY SSF55957 373 457 3.31E-20 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 372 1.3E-20 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0579 62272107a4fa24287b845c6ee6870d4c 469 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 379 455 2.1E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 Pfam PF00501 AMP-binding enzyme 2 77 1.4E-21 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 Pfam PF13193 AMP-binding enzyme C-terminal domain 85 155 1.3E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 Gene3D G3DSA:3.30.559.30 420 680 6.0E-62 T 14-10-2018 TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 Pfam PF00550 Phosphopantetheine attachment site 182 243 2.1E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 SUPERFAMILY SSF56801 2 192 4.71E-60 T 14-10-2018 TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 SMART SM00823 Phosphopantetheine attachment site 180 248 3.1E-5 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 Gene3D G3DSA:1.10.1200.10 172 248 1.2E-19 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 SUPERFAMILY SSF47336 174 242 1.28E-15 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 Pfam PF00668 Condensation domain 266 676 9.1E-54 T 14-10-2018 IPR001242 Condensation domain TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 SUPERFAMILY SSF52777 264 447 3.89E-34 T 14-10-2018 TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 ProSitePatterns PS00012 Phosphopantetheine attachment site. 204 219 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 Gene3D G3DSA:3.40.50.12780 1 71 1.1E-25 T 14-10-2018 TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 549 698 8.6E-25 T 14-10-2018 IPR010060 Non-ribosomal peptide synthase TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 SUPERFAMILY SSF52777 436 676 4.34E-30 T 14-10-2018 TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 Gene3D G3DSA:3.30.300.30 72 169 2.2E-30 T 14-10-2018 TMO_b0324 a2dab3ecd07263b12ff02c8926badf6a 704 Gene3D G3DSA:3.30.559.10 252 419 1.4E-47 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_a0283 8f9cd0ea23c138ad420e469d6ce2648d 234 Pfam PF07729 FCD domain 88 213 1.6E-23 T 14-10-2018 IPR011711 GntR, C-terminal TMO_a0283 8f9cd0ea23c138ad420e469d6ce2648d 234 Gene3D G3DSA:1.10.10.10 2 78 2.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0283 8f9cd0ea23c138ad420e469d6ce2648d 234 SMART SM00895 87 214 3.0E-21 T 14-10-2018 IPR011711 GntR, C-terminal TMO_a0283 8f9cd0ea23c138ad420e469d6ce2648d 234 Gene3D G3DSA:1.20.120.530 81 225 4.6E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_a0283 8f9cd0ea23c138ad420e469d6ce2648d 234 SMART SM00345 19 77 3.7E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0283 8f9cd0ea23c138ad420e469d6ce2648d 234 SUPERFAMILY SSF46785 11 81 1.37E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0283 8f9cd0ea23c138ad420e469d6ce2648d 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 9.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0283 8f9cd0ea23c138ad420e469d6ce2648d 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 9.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0283 8f9cd0ea23c138ad420e469d6ce2648d 234 SUPERFAMILY SSF48008 83 220 2.33E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_a0283 8f9cd0ea23c138ad420e469d6ce2648d 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 1.6E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3240 293c6e9a30efd611e83025694de4d8bc 440 Pfam PF08245 Mur ligase middle domain 64 214 3.9E-7 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TMO_3240 293c6e9a30efd611e83025694de4d8bc 440 Gene3D G3DSA:3.40.1190.10 28 250 1.8E-32 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_3240 293c6e9a30efd611e83025694de4d8bc 440 SUPERFAMILY SSF53623 44 222 1.26E-32 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 ProSitePatterns PS00756 Protein secY signature 2. 178 195 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 SUPERFAMILY SSF103491 16 428 2.09E-129 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 PIRSF PIRSF004557 10 445 5.1E-121 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 8.8E-95 T 14-10-2018 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 159 184 8.8E-95 T 14-10-2018 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 319 341 8.8E-95 T 14-10-2018 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 185 208 8.8E-95 T 14-10-2018 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 406 424 8.8E-95 T 14-10-2018 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 277 296 8.8E-95 T 14-10-2018 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 374 392 8.8E-95 T 14-10-2018 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 8.8E-95 T 14-10-2018 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 8.8E-95 T 14-10-2018 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 Gene3D G3DSA:1.10.3370.10 13 433 4.8E-161 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 437 29.502 T 14-10-2018 IPR026593 Protein translocase subunit SecY TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 432 4.9E-129 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TMO_2612 1149edb3895cf1e52fe369cd1ddb3b7f 447 Pfam PF00344 SecY translocase 80 421 1.0E-116 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TMO_a0296 6fef3baf3be702d3bab8b98e67d61a32 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 22 285 5.9E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2522 0376941df9620af8c618ed6ff462ba83 868 Pfam PF13087 AAA domain 306 491 1.2E-10 T 14-10-2018 TMO_2522 0376941df9620af8c618ed6ff462ba83 868 SUPERFAMILY SSF52980 528 635 1.23E-15 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TMO_2522 0376941df9620af8c618ed6ff462ba83 868 Pfam PF11784 Protein of unknown function (DUF3320) 701 748 1.7E-16 T 14-10-2018 IPR021754 Protein of unknown function DUF3320 TMO_2522 0376941df9620af8c618ed6ff462ba83 868 Gene3D G3DSA:3.40.50.300 318 504 9.9E-24 T 14-10-2018 TMO_2522 0376941df9620af8c618ed6ff462ba83 868 Gene3D G3DSA:3.40.960.10 533 636 4.2E-16 T 14-10-2018 TMO_2522 0376941df9620af8c618ed6ff462ba83 868 SUPERFAMILY SSF52540 230 519 3.72E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2522 0376941df9620af8c618ed6ff462ba83 868 Gene3D G3DSA:3.40.50.300 139 285 4.7E-14 T 14-10-2018 TMO_2522 0376941df9620af8c618ed6ff462ba83 868 Pfam PF13086 AAA domain 230 270 1.7E-7 T 14-10-2018 TMO_2961 88d906d3a71133c9b46a697425c92a12 99 Gene3D G3DSA:3.30.2310.20 1 96 4.7E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_2961 88d906d3a71133c9b46a697425c92a12 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 91 5.8E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_2961 88d906d3a71133c9b46a697425c92a12 99 PIRSF PIRSF029218 1 98 2.3E-22 T 14-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 TMO_3126 301e336723adc3c986827aafaa6da435 425 Pfam PF01494 FAD binding domain 292 357 5.7E-12 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 TMO_3126 301e336723adc3c986827aafaa6da435 425 Pfam PF01494 FAD binding domain 2 173 3.5E-12 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 TMO_3126 301e336723adc3c986827aafaa6da435 425 Gene3D G3DSA:3.50.50.60 3 353 6.8E-103 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3126 301e336723adc3c986827aafaa6da435 425 SUPERFAMILY SSF54373 182 288 9.61E-33 T 14-10-2018 TMO_3126 301e336723adc3c986827aafaa6da435 425 SUPERFAMILY SSF51905 1 365 3.89E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3126 301e336723adc3c986827aafaa6da435 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 8.6E-20 T 14-10-2018 TMO_3126 301e336723adc3c986827aafaa6da435 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 8.6E-20 T 14-10-2018 TMO_3126 301e336723adc3c986827aafaa6da435 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 8.6E-20 T 14-10-2018 TMO_3126 301e336723adc3c986827aafaa6da435 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 8.6E-20 T 14-10-2018 TMO_3126 301e336723adc3c986827aafaa6da435 425 Gene3D G3DSA:3.30.9.30 35 291 6.8E-103 T 14-10-2018 TMO_0176 1d477e14978aaad7ccc25d34fcd9b9e7 199 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 196 21.187 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid TMO_0176 1d477e14978aaad7ccc25d34fcd9b9e7 199 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 138 191 3.1E-14 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal TMO_0176 1d477e14978aaad7ccc25d34fcd9b9e7 199 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 95 1.5E-19 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 TMO_0176 1d477e14978aaad7ccc25d34fcd9b9e7 199 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 1.3E-22 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 TMO_0176 1d477e14978aaad7ccc25d34fcd9b9e7 199 Gene3D G3DSA:3.30.160.100 1 109 1.2E-22 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like TMO_0176 1d477e14978aaad7ccc25d34fcd9b9e7 199 SUPERFAMILY SSF69754 1 101 3.14E-29 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like TMO_0176 1d477e14978aaad7ccc25d34fcd9b9e7 199 Gene3D G3DSA:3.30.505.50 151 195 6.5E-11 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily TMO_0862 b6569c3faa71c709fba513fff951bae3 518 SUPERFAMILY SSF52540 259 491 3.04E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0862 b6569c3faa71c709fba513fff951bae3 518 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0862 b6569c3faa71c709fba513fff951bae3 518 Pfam PF00005 ABC transporter 19 166 7.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0862 b6569c3faa71c709fba513fff951bae3 518 SMART SM00382 28 214 3.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0862 b6569c3faa71c709fba513fff951bae3 518 Gene3D G3DSA:3.40.50.300 246 496 3.0E-40 T 14-10-2018 TMO_0862 b6569c3faa71c709fba513fff951bae3 518 SUPERFAMILY SSF52540 3 224 1.84E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0862 b6569c3faa71c709fba513fff951bae3 518 Gene3D G3DSA:3.40.50.300 1 228 1.8E-55 T 14-10-2018 TMO_0862 b6569c3faa71c709fba513fff951bae3 518 Pfam PF00005 ABC transporter 277 433 1.0E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2648 ef5ba04bb31e0d245b48a135ca20e730 284 SUPERFAMILY SSF55315 38 114 7.89E-14 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like TMO_2648 ef5ba04bb31e0d245b48a135ca20e730 284 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 43 116 9.0E-15 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TMO_2648 ef5ba04bb31e0d245b48a135ca20e730 284 Gene3D G3DSA:3.30.1330.30 35 114 1.7E-8 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like TMO_2648 ef5ba04bb31e0d245b48a135ca20e730 284 Pfam PF00588 SpoU rRNA Methylase family 133 273 1.4E-37 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TMO_2648 ef5ba04bb31e0d245b48a135ca20e730 284 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 42 275 5.5E-56 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 TMO_2648 ef5ba04bb31e0d245b48a135ca20e730 284 Gene3D G3DSA:3.40.1280.10 116 279 8.2E-50 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_2648 ef5ba04bb31e0d245b48a135ca20e730 284 SMART SM00967 41 118 1.7E-15 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TMO_2648 ef5ba04bb31e0d245b48a135ca20e730 284 SUPERFAMILY SSF75217 123 275 8.5E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases TMO_0920 46edf8a174f00ad3ef5abc199a363a77 391 SUPERFAMILY SSF55681 10 321 6.16E-47 T 14-10-2018 TMO_0920 46edf8a174f00ad3ef5abc199a363a77 391 PIRSF PIRSF001549 7 328 4.1E-39 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 TMO_0920 46edf8a174f00ad3ef5abc199a363a77 391 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 20 366 22.727 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 TMO_0920 46edf8a174f00ad3ef5abc199a363a77 391 Pfam PF13393 Histidyl-tRNA synthetase 13 318 1.8E-86 T 14-10-2018 TMO_0920 46edf8a174f00ad3ef5abc199a363a77 391 Gene3D G3DSA:3.30.930.10 4 327 5.9E-64 T 14-10-2018 TMO_c0707 6cb30f4e018c18f5d2207ec3c77dfa7c 458 Gene3D G3DSA:1.25.40.10 246 454 8.0E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0707 6cb30f4e018c18f5d2207ec3c77dfa7c 458 Pfam PF13432 Tetratricopeptide repeat 282 345 3.8E-9 T 14-10-2018 TMO_c0707 6cb30f4e018c18f5d2207ec3c77dfa7c 458 Gene3D G3DSA:3.30.2010.10 35 118 1.0E-5 T 14-10-2018 TMO_c0707 6cb30f4e018c18f5d2207ec3c77dfa7c 458 Pfam PF01435 Peptidase family M48 42 230 4.0E-29 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_c0707 6cb30f4e018c18f5d2207ec3c77dfa7c 458 SUPERFAMILY SSF48452 279 426 3.54E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_2975 bda52c9fe9d9bb81183c64ddb07b1681 468 Gene3D G3DSA:2.70.70.10 341 464 5.3E-26 T 14-10-2018 IPR011055 Duplicated hybrid motif TMO_2975 bda52c9fe9d9bb81183c64ddb07b1681 468 SUPERFAMILY SSF51261 340 462 6.28E-28 T 14-10-2018 IPR011055 Duplicated hybrid motif TMO_2975 bda52c9fe9d9bb81183c64ddb07b1681 468 Pfam PF01551 Peptidase family M23 368 458 1.0E-19 T 14-10-2018 IPR016047 Peptidase M23 TMO_2198 59d39ac472480b7b31da160848cd0910 599 Pfam PF11843 Protein of unknown function (DUF3363) 296 421 4.4E-29 T 14-10-2018 IPR021795 Protein of unknown function DUF3363 TMO_2198 59d39ac472480b7b31da160848cd0910 599 Pfam PF11843 Protein of unknown function (DUF3363) 422 597 3.4E-56 T 14-10-2018 IPR021795 Protein of unknown function DUF3363 TMO_2900 78d027888f05926519777504fed41102 365 SUPERFAMILY SSF111369 42 111 3.92E-11 T 14-10-2018 TMO_2900 78d027888f05926519777504fed41102 365 SUPERFAMILY SSF111369 185 281 9.94E-12 T 14-10-2018 TMO_2900 78d027888f05926519777504fed41102 365 Gene3D G3DSA:2.40.30.170 224 344 2.1E-36 T 14-10-2018 TMO_2900 78d027888f05926519777504fed41102 365 Gene3D G3DSA:1.10.287.470 77 106 1.0E-12 T 14-10-2018 TMO_2900 78d027888f05926519777504fed41102 365 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 285 1.3E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_2900 78d027888f05926519777504fed41102 365 Gene3D G3DSA:2.40.50.100 44 76 1.0E-12 T 14-10-2018 TMO_2900 78d027888f05926519777504fed41102 365 Gene3D G3DSA:1.10.287.470 109 177 3.1E-8 T 14-10-2018 TMO_0182 075ce7dd59455d989ef08f970ae80975 203 Gene3D G3DSA:3.30.420.10 9 188 3.5E-44 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_0182 075ce7dd59455d989ef08f970ae80975 203 SMART SM00474 1 169 3.7E-36 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_0182 075ce7dd59455d989ef08f970ae80975 203 SUPERFAMILY SSF53098 19 190 3.14E-52 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_0182 075ce7dd59455d989ef08f970ae80975 203 Pfam PF01612 3'-5' exonuclease 19 168 1.1E-35 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_b0260 3b97807c00b79af6f729a9491bf14818 258 SUPERFAMILY SSF46785 10 82 1.34E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0260 3b97807c00b79af6f729a9491bf14818 258 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 7 251 6.0E-97 T 14-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 TMO_b0260 3b97807c00b79af6f729a9491bf14818 258 Pfam PF01614 Bacterial transcriptional regulator 129 252 2.8E-33 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_b0260 3b97807c00b79af6f729a9491bf14818 258 SUPERFAMILY SSF55781 74 252 2.09E-47 T 14-10-2018 TMO_b0260 3b97807c00b79af6f729a9491bf14818 258 Gene3D G3DSA:3.30.450.40 79 255 1.2E-53 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_b0260 3b97807c00b79af6f729a9491bf14818 258 Pfam PF09339 IclR helix-turn-helix domain 14 63 1.9E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_b0260 3b97807c00b79af6f729a9491bf14818 258 Gene3D G3DSA:1.10.10.10 3 78 2.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0260 3b97807c00b79af6f729a9491bf14818 258 SMART SM00346 10 98 2.7E-27 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_3297 8357513f24a7fa7327892090b45bac02 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_3297 8357513f24a7fa7327892090b45bac02 269 Gene3D G3DSA:3.40.50.720 7 262 5.3E-72 T 14-10-2018 TMO_3297 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 8.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3297 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 8.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3297 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 8.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3297 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 8.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3297 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 8.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3297 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 8.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3297 8357513f24a7fa7327892090b45bac02 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 260 1.8E-52 T 14-10-2018 TMO_3297 8357513f24a7fa7327892090b45bac02 269 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 202 0.0013 T 14-10-2018 TMO_3297 8357513f24a7fa7327892090b45bac02 269 SUPERFAMILY SSF51735 16 261 2.79E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3297 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 4.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3297 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 4.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3297 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 4.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0320 4d00841e9e4a550071098bb78985372a 386 Pfam PF13524 Glycosyl transferases group 1 262 349 1.2E-16 T 14-10-2018 TMO_a0320 4d00841e9e4a550071098bb78985372a 386 SUPERFAMILY SSF53756 15 349 1.71E-17 T 14-10-2018 TMO_a0320 4d00841e9e4a550071098bb78985372a 386 Gene3D G3DSA:3.40.50.2000 188 335 3.9E-10 T 14-10-2018 TMO_c0935 e7ca7c403699e7f3a344db9a9641274c 401 Pfam PF13673 Acetyltransferase (GNAT) domain 46 177 7.7E-11 T 14-10-2018 IPR000182 GNAT domain TMO_c0935 e7ca7c403699e7f3a344db9a9641274c 401 Pfam PF11814 Peptidase_C39 like family 188 393 2.6E-82 T 14-10-2018 IPR021770 Protein of unknown function DUF3335 TMO_c0935 e7ca7c403699e7f3a344db9a9641274c 401 Gene3D G3DSA:3.40.630.30 21 182 6.9E-27 T 14-10-2018 TMO_c0935 e7ca7c403699e7f3a344db9a9641274c 401 SUPERFAMILY SSF55729 26 178 1.65E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_0473 ef1ea4674847bfc0a182abd7e531dde8 317 Pfam PF12833 Helix-turn-helix domain 222 301 2.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0473 ef1ea4674847bfc0a182abd7e531dde8 317 Pfam PF12852 Cupin 2 183 7.1E-39 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain TMO_0473 ef1ea4674847bfc0a182abd7e531dde8 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 299 4.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_0473 ef1ea4674847bfc0a182abd7e531dde8 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 283 4.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_0473 ef1ea4674847bfc0a182abd7e531dde8 317 SMART SM00342 216 299 6.9E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0473 ef1ea4674847bfc0a182abd7e531dde8 317 SUPERFAMILY SSF46689 252 301 6.27E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0473 ef1ea4674847bfc0a182abd7e531dde8 317 Gene3D G3DSA:1.10.10.60 195 310 1.4E-25 T 14-10-2018 TMO_0473 ef1ea4674847bfc0a182abd7e531dde8 317 SUPERFAMILY SSF46689 199 250 8.72E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1510 b7673aeebddfc4561d91c914745d75f3 348 SUPERFAMILY SSF51445 15 330 7.16E-68 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_1510 b7673aeebddfc4561d91c914745d75f3 348 Gene3D G3DSA:3.20.20.300 13 345 7.8E-94 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 TMO_1510 b7673aeebddfc4561d91c914745d75f3 348 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 25 307 2.9E-53 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TMO_d0010 8bab511ac1fbfdcff552de69f7bcf300 483 SUPERFAMILY SSF55931 12 303 1.5E-114 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TMO_d0010 8bab511ac1fbfdcff552de69f7bcf300 483 SUPERFAMILY SSF89095 304 407 2.22E-32 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 TMO_d0010 8bab511ac1fbfdcff552de69f7bcf300 483 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 10 482 37.544 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 TMO_d0010 8bab511ac1fbfdcff552de69f7bcf300 483 SMART SM00845 335 481 3.4E-83 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TMO_d0010 8bab511ac1fbfdcff552de69f7bcf300 483 Gene3D G3DSA:1.10.10.410 421 483 3.9E-27 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal TMO_d0010 8bab511ac1fbfdcff552de69f7bcf300 483 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 152 166 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 TMO_d0010 8bab511ac1fbfdcff552de69f7bcf300 483 Pfam PF02637 GatB domain 335 481 4.1E-53 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TMO_d0010 8bab511ac1fbfdcff552de69f7bcf300 483 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 10 482 1.4E-165 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 TMO_d0010 8bab511ac1fbfdcff552de69f7bcf300 483 Pfam PF02934 GatB/GatE catalytic domain 13 296 2.3E-113 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 TMO_d0010 8bab511ac1fbfdcff552de69f7bcf300 483 Gene3D G3DSA:1.10.150.380 304 420 3.4E-37 T 14-10-2018 TMO_2474 514b14c4ff122e5293ea7c7d0a7dda8b 157 Pfam PF01899 Na+/H+ ion antiporter subunit 8 137 2.7E-26 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 TMO_1387 e341b930863161e01e4bc0f604a9d772 288 Gene3D G3DSA:3.40.50.300 17 234 3.1E-55 T 14-10-2018 TMO_1387 e341b930863161e01e4bc0f604a9d772 288 SUPERFAMILY SSF52540 12 242 5.24E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1387 e341b930863161e01e4bc0f604a9d772 288 Pfam PF00005 ABC transporter 37 169 1.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1387 e341b930863161e01e4bc0f604a9d772 288 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1387 e341b930863161e01e4bc0f604a9d772 288 SMART SM00382 46 218 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1628 edfb5728e546820f529f2e1103677ce7 110 Pfam PF05957 Bacterial protein of unknown function (DUF883) 18 110 3.8E-17 T 14-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 TMO_a0255 f5f4c62fe30643212da50222c8d56746 333 PIRSF PIRSF033905 1 324 2.1E-157 T 14-10-2018 IPR009645 Uncharacterised conserved protein GguC TMO_a0255 f5f4c62fe30643212da50222c8d56746 333 SUPERFAMILY SSF56529 110 314 2.56E-20 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_a0255 f5f4c62fe30643212da50222c8d56746 333 Gene3D G3DSA:3.90.850.10 117 316 7.1E-10 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 104 3.4E-40 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 377 1.0E-64 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Gene3D G3DSA:3.30.300.10 105 379 2.8E-162 T 14-10-2018 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 SUPERFAMILY SSF55973 5 111 1.92E-40 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Gene3D G3DSA:3.30.300.10 7 235 2.8E-162 T 14-10-2018 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 PIRSF PIRSF000497 1 389 8.6E-161 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 233 4.2E-36 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 SUPERFAMILY SSF55973 114 234 1.53E-41 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Gene3D G3DSA:3.30.300.10 13 272 2.8E-162 T 14-10-2018 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 387 8.7E-155 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 SUPERFAMILY SSF55973 235 387 7.06E-65 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TMO_3537 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 388 49.748 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TMO_2569 9028991ab0936b46def91790a61a79db 467 Gene3D G3DSA:3.10.129.10 3 153 5.6E-18 T 14-10-2018 TMO_2569 9028991ab0936b46def91790a61a79db 467 Gene3D G3DSA:3.40.718.10 167 462 1.4E-93 T 14-10-2018 TMO_2569 9028991ab0936b46def91790a61a79db 467 Pfam PF01515 Phosphate acetyl/butaryl transferase 245 454 9.4E-43 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TMO_2569 9028991ab0936b46def91790a61a79db 467 SUPERFAMILY SSF54637 9 136 1.32E-13 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_2569 9028991ab0936b46def91790a61a79db 467 SUPERFAMILY SSF53659 171 461 3.87E-65 T 14-10-2018 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 ProSitePatterns PS00455 Putative AMP-binding domain signature. 687 698 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 Gene3D G3DSA:3.30.300.30 371 462 2.2E-9 T 14-10-2018 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 Pfam PF08659 KR domain 1229 1426 1.6E-22 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 Pfam PF00501 AMP-binding enzyme 549 948 1.2E-58 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 Gene3D G3DSA:3.40.50.12780 510 941 1.7E-104 T 14-10-2018 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 SUPERFAMILY SSF56801 513 1050 2.75E-91 T 14-10-2018 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 SMART SM00823 Phosphopantetheine attachment site 1537 1606 0.0025 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 Gene3D G3DSA:3.40.50.12780 170 366 1.1E-11 T 14-10-2018 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 Gene3D G3DSA:3.40.50.720 1055 1479 1.3E-56 T 14-10-2018 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 SUPERFAMILY SSF51735 1227 1443 1.46E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 SUPERFAMILY SSF47336 1531 1602 1.58E-16 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 Gene3D G3DSA:1.10.1200.10 1527 1611 2.7E-22 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 Gene3D G3DSA:3.30.300.30 943 1049 1.6E-28 T 14-10-2018 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 SUPERFAMILY SSF51735 1004 1214 1.48E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 Pfam PF00550 Phosphopantetheine attachment site 1539 1602 1.4E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1229 1428 9.1E-10 T 14-10-2018 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 SUPERFAMILY SSF56801 204 460 7.98E-26 T 14-10-2018 TMO_c0607 3ee74693d7951c72f3abcd69f4cae8cd 1613 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1561 1576 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_b0121 e02eeffa6446f4fde6a9aae5578ace8b 263 Gene3D G3DSA:3.90.850.10 5 262 1.9E-75 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_b0121 e02eeffa6446f4fde6a9aae5578ace8b 263 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 257 2.7E-10 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 TMO_b0121 e02eeffa6446f4fde6a9aae5578ace8b 263 SUPERFAMILY SSF56529 7 261 1.83E-70 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_b0416 b475a4f31d6180ea5db1efa3ca5c1ea3 345 Pfam PF00107 Zinc-binding dehydrogenase 178 306 5.0E-30 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_b0416 b475a4f31d6180ea5db1efa3ca5c1ea3 345 SMART SM00829 11 341 1.0E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_b0416 b475a4f31d6180ea5db1efa3ca5c1ea3 345 SUPERFAMILY SSF51735 142 311 1.79E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0416 b475a4f31d6180ea5db1efa3ca5c1ea3 345 SUPERFAMILY SSF50129 4 162 1.45E-53 T 14-10-2018 IPR011032 GroES-like superfamily TMO_b0416 b475a4f31d6180ea5db1efa3ca5c1ea3 345 Gene3D G3DSA:3.40.50.720 151 292 3.3E-119 T 14-10-2018 TMO_b0416 b475a4f31d6180ea5db1efa3ca5c1ea3 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 135 5.5E-34 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_b0416 b475a4f31d6180ea5db1efa3ca5c1ea3 345 Gene3D G3DSA:3.90.180.10 8 334 3.3E-119 T 14-10-2018 TMO_b0416 b475a4f31d6180ea5db1efa3ca5c1ea3 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 TMO_0388 7a1d2d564d5d40eddf10a8b836fe3eee 461 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 TMO_0388 7a1d2d564d5d40eddf10a8b836fe3eee 461 Pfam PF07732 Multicopper oxidase 49 155 5.9E-32 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 TMO_0388 7a1d2d564d5d40eddf10a8b836fe3eee 461 SUPERFAMILY SSF49503 34 157 1.02E-29 T 14-10-2018 IPR008972 Cupredoxin TMO_0388 7a1d2d564d5d40eddf10a8b836fe3eee 461 Gene3D G3DSA:2.60.40.420 36 155 5.9E-33 T 14-10-2018 IPR008972 Cupredoxin TMO_0388 7a1d2d564d5d40eddf10a8b836fe3eee 461 SUPERFAMILY SSF49503 308 459 2.57E-31 T 14-10-2018 IPR008972 Cupredoxin TMO_0388 7a1d2d564d5d40eddf10a8b836fe3eee 461 Gene3D G3DSA:2.60.40.420 309 460 4.6E-32 T 14-10-2018 IPR008972 Cupredoxin TMO_0388 7a1d2d564d5d40eddf10a8b836fe3eee 461 SUPERFAMILY SSF49503 157 271 1.67E-8 T 14-10-2018 IPR008972 Cupredoxin TMO_0388 7a1d2d564d5d40eddf10a8b836fe3eee 461 Gene3D G3DSA:2.60.40.420 157 305 9.3E-21 T 14-10-2018 IPR008972 Cupredoxin TMO_0388 7a1d2d564d5d40eddf10a8b836fe3eee 461 Pfam PF07731 Multicopper oxidase 361 459 3.7E-21 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 TMO_0388 7a1d2d564d5d40eddf10a8b836fe3eee 461 ProSitePatterns PS00079 Multicopper oxidases signature 1. 437 457 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site TMO_c0509 27130c08b1017626657a06ea409417f2 558 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 519 7.1E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_c0509 27130c08b1017626657a06ea409417f2 558 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 180 5.4E-18 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain TMO_c0509 27130c08b1017626657a06ea409417f2 558 SUPERFAMILY SSF58104 237 551 1.44E-57 T 14-10-2018 TMO_c0509 27130c08b1017626657a06ea409417f2 558 Gene3D G3DSA:1.20.1480.50 169 267 1.7E-13 T 14-10-2018 TMO_c0509 27130c08b1017626657a06ea409417f2 558 SMART SM00304 209 262 1.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_c0509 27130c08b1017626657a06ea409417f2 558 SMART SM00283 298 552 3.4E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_c0509 27130c08b1017626657a06ea409417f2 558 Pfam PF00672 HAMP domain 209 257 4.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_c0509 27130c08b1017626657a06ea409417f2 558 Gene3D G3DSA:1.10.287.950 268 558 3.1E-51 T 14-10-2018 TMO_b0178 c038a5f2edfe91decc9d5bdb74223782 283 SUPERFAMILY SSF51735 6 253 1.37E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0178 c038a5f2edfe91decc9d5bdb74223782 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0178 c038a5f2edfe91decc9d5bdb74223782 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0178 c038a5f2edfe91decc9d5bdb74223782 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0178 c038a5f2edfe91decc9d5bdb74223782 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0178 c038a5f2edfe91decc9d5bdb74223782 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0178 c038a5f2edfe91decc9d5bdb74223782 283 Gene3D G3DSA:3.40.50.720 1 256 8.8E-62 T 14-10-2018 TMO_b0178 c038a5f2edfe91decc9d5bdb74223782 283 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 253 8.3E-38 T 14-10-2018 TMO_0149 482210c474c47b58dd6e26d5c6cebdbb 259 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 4 259 42.553 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 TMO_0149 482210c474c47b58dd6e26d5c6cebdbb 259 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 7 258 1.4E-95 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 TMO_0149 482210c474c47b58dd6e26d5c6cebdbb 259 PIRSF PIRSF005457 1 259 6.3E-101 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 TMO_0149 482210c474c47b58dd6e26d5c6cebdbb 259 SMART SM00849 14 175 9.7E-32 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_0149 482210c474c47b58dd6e26d5c6cebdbb 259 Pfam PF00753 Metallo-beta-lactamase superfamily 29 175 6.3E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_0149 482210c474c47b58dd6e26d5c6cebdbb 259 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 57 77 - T 14-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 TMO_0149 482210c474c47b58dd6e26d5c6cebdbb 259 Gene3D G3DSA:3.60.15.10 4 259 5.9E-83 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_0149 482210c474c47b58dd6e26d5c6cebdbb 259 SUPERFAMILY SSF56281 6 258 2.8E-66 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_0149 482210c474c47b58dd6e26d5c6cebdbb 259 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 176 258 1.4E-23 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 TMO_2586 920548587b0342dba27c8fedaf70af3c 171 Gene3D G3DSA:1.10.10.10 91 169 3.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2586 920548587b0342dba27c8fedaf70af3c 171 Pfam PF04542 Sigma-70 region 2 12 75 4.5E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_2586 920548587b0342dba27c8fedaf70af3c 171 Pfam PF08281 Sigma-70, region 4 110 162 1.1E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_2586 920548587b0342dba27c8fedaf70af3c 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 166 4.3E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_2586 920548587b0342dba27c8fedaf70af3c 171 SUPERFAMILY SSF88946 11 80 1.77E-15 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_2586 920548587b0342dba27c8fedaf70af3c 171 SUPERFAMILY SSF88659 92 168 2.8E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_2586 920548587b0342dba27c8fedaf70af3c 171 Gene3D G3DSA:1.10.1740.10 5 78 5.7E-12 T 14-10-2018 TMO_c0575 31e6cdb0084cfd120298afc62d6b8981 410 Gene3D G3DSA:3.40.50.2300 156 287 5.4E-110 T 14-10-2018 TMO_c0575 31e6cdb0084cfd120298afc62d6b8981 410 Gene3D G3DSA:3.40.50.2300 40 348 5.4E-110 T 14-10-2018 TMO_c0575 31e6cdb0084cfd120298afc62d6b8981 410 SUPERFAMILY SSF53822 36 408 2.69E-87 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_c0575 31e6cdb0084cfd120298afc62d6b8981 410 Pfam PF13458 Periplasmic binding protein 36 373 4.8E-86 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_0084 a49ca35e6185c0885d1cac801b441d32 258 Gene3D G3DSA:3.40.50.10090 1 111 2.0E-20 T 14-10-2018 TMO_0084 a49ca35e6185c0885d1cac801b441d32 258 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 231 5.3E-31 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_0084 a49ca35e6185c0885d1cac801b441d32 258 Gene3D G3DSA:3.40.50.10090 123 237 3.4E-9 T 14-10-2018 TMO_0084 a49ca35e6185c0885d1cac801b441d32 258 SUPERFAMILY SSF69618 1 237 1.06E-38 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TMO_3227 f22dd7c9fbfe36b7d700bc35a06ac562 301 SUPERFAMILY SSF161098 60 287 2.09E-46 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3227 f22dd7c9fbfe36b7d700bc35a06ac562 301 Gene3D G3DSA:1.10.3720.10 57 298 3.7E-54 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3227 f22dd7c9fbfe36b7d700bc35a06ac562 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 297 4.9E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2831 42924861d9a32882872abadb47d32074 660 Gene3D G3DSA:1.20.1560.10 40 377 5.7E-84 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_2831 42924861d9a32882872abadb47d32074 660 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 66 635 1.8E-182 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 TMO_2831 42924861d9a32882872abadb47d32074 660 Pfam PF00005 ABC transporter 413 562 2.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2831 42924861d9a32882872abadb47d32074 660 Gene3D G3DSA:3.40.50.300 391 643 1.4E-90 T 14-10-2018 TMO_2831 42924861d9a32882872abadb47d32074 660 ProSitePatterns PS00211 ABC transporters family signature. 534 548 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2831 42924861d9a32882872abadb47d32074 660 SUPERFAMILY SSF90123 64 379 2.75E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_2831 42924861d9a32882872abadb47d32074 660 SMART SM00382 422 608 3.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2831 42924861d9a32882872abadb47d32074 660 Pfam PF00664 ABC transporter transmembrane region 76 337 2.3E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_2831 42924861d9a32882872abadb47d32074 660 SUPERFAMILY SSF52540 391 633 3.03E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0486 892bb5d15d2161eb5ec34ff54d69157d 222 SUPERFAMILY SSF53335 24 217 1.94E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_a0486 892bb5d15d2161eb5ec34ff54d69157d 222 Gene3D G3DSA:3.40.50.150 37 206 1.7E-33 T 14-10-2018 TMO_a0486 892bb5d15d2161eb5ec34ff54d69157d 222 Pfam PF04989 Cephalosporin hydroxylase 24 217 2.8E-60 T 14-10-2018 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase GO:0008168|GO:0008610 TMO_1854 123bfd3599504321bf84bbb195549857 224 Hamap MF_00328 Guanylate kinase [gmk]. 18 202 35.179 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 TMO_1854 123bfd3599504321bf84bbb195549857 224 SUPERFAMILY SSF52540 18 204 4.27E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1854 123bfd3599504321bf84bbb195549857 224 SMART SM00072 19 202 2.5E-56 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit TMO_1854 123bfd3599504321bf84bbb195549857 224 Gene3D G3DSA:3.30.63.10 51 110 1.3E-63 T 14-10-2018 TMO_1854 123bfd3599504321bf84bbb195549857 224 ProSitePatterns PS00856 Guanylate kinase-like signature. 54 71 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 TMO_1854 123bfd3599504321bf84bbb195549857 224 Gene3D G3DSA:3.40.50.300 24 198 1.3E-63 T 14-10-2018 TMO_1854 123bfd3599504321bf84bbb195549857 224 Pfam PF00625 Guanylate kinase 22 200 6.8E-51 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit TMO_1854 123bfd3599504321bf84bbb195549857 224 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 21 199 4.6E-70 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.5E-93 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 82 91 1.7E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 262 267 1.7E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 221 230 1.7E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 287 301 1.7E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 44 66 1.7E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 137 154 1.7E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 308 39.788 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 SUPERFAMILY SSF53671 5 307 2.23E-95 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 150 2.2E-43 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 138 149 1.6E-14 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 258 267 1.6E-14 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 54 73 1.6E-14 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 303 7.8E-19 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 Gene3D G3DSA:3.40.50.1370 138 285 5.0E-92 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 54 61 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_2546 8e982d61f03057a3d3c7b51cbfa4ef93 311 Gene3D G3DSA:3.40.50.1370 13 300 5.0E-92 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TMO_2819 8e789551494679de3e189dc7ac627bee 328 Pfam PF01380 SIS domain 139 263 1.1E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TMO_2819 8e789551494679de3e189dc7ac627bee 328 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 73 6.8E-10 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 TMO_2819 8e789551494679de3e189dc7ac627bee 328 SUPERFAMILY SSF53697 124 269 1.87E-17 T 14-10-2018 TMO_2819 8e789551494679de3e189dc7ac627bee 328 SUPERFAMILY SSF46689 9 81 5.73E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2819 8e789551494679de3e189dc7ac627bee 328 Gene3D G3DSA:1.10.10.10 6 82 8.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2819 8e789551494679de3e189dc7ac627bee 328 Gene3D G3DSA:3.40.50.10490 107 286 2.4E-24 T 14-10-2018 TMO_0030 0822867d85faa49bc0e84bb6e9613f35 328 Gene3D G3DSA:3.90.1280.10 266 325 7.0E-16 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 TMO_0030 0822867d85faa49bc0e84bb6e9613f35 328 SUPERFAMILY SSF64397 21 274 2.62E-59 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 TMO_0030 0822867d85faa49bc0e84bb6e9613f35 328 Gene3D G3DSA:3.55.30.10 17 208 2.3E-58 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 TMO_0030 0822867d85faa49bc0e84bb6e9613f35 328 Gene3D G3DSA:1.10.287.480 216 265 5.6E-7 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily TMO_0030 0822867d85faa49bc0e84bb6e9613f35 328 SUPERFAMILY SSF118352 266 322 3.4E-14 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 TMO_0030 0822867d85faa49bc0e84bb6e9613f35 328 Pfam PF01430 Hsp33 protein 21 313 2.8E-73 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 TMO_0030 0822867d85faa49bc0e84bb6e9613f35 328 PIRSF PIRSF005261 8 324 5.2E-71 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 2.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 2.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 2.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 257 2.6E-68 T 14-10-2018 TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 SUPERFAMILY SSF51735 12 259 2.53E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 Gene3D G3DSA:3.40.50.720 1 260 1.1E-84 T 14-10-2018 TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 1.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0431 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 SUPERFAMILY SSF56059 9 389 1.29E-145 T 14-10-2018 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 Gene3D G3DSA:1.10.189.10 356 538 6.1E-77 T 14-10-2018 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 SUPERFAMILY SSF51621 520 881 1.13E-131 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 Pfam PF00391 PEP-utilising enzyme, mobile domain 430 512 1.3E-25 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 526 878 3.2E-91 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 1 880 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 Gene3D G3DSA:1.20.80.30 110 197 1.5E-107 T 14-10-2018 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 770 788 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 Gene3D G3DSA:3.50.30.10 394 518 6.1E-77 T 14-10-2018 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 Gene3D G3DSA:3.20.20.60 541 883 2.5E-152 T 14-10-2018 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 Gene3D G3DSA:3.30.1490.20 10 242 1.5E-107 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 367 3.2E-65 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 Gene3D G3DSA:3.30.470.20 243 352 3.0E-40 T 14-10-2018 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 459 470 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 SUPERFAMILY SSF52009 397 521 3.66E-37 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TMO_c0793 87ede0fdb5947df1fa5ee1926ee8d19e 884 PIRSF PIRSF000853 1 884 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_0373 5d40c8e52baa1b167a37d7291eaeb8d5 366 Gene3D G3DSA:3.40.190.10 139 354 1.9E-116 T 14-10-2018 TMO_0373 5d40c8e52baa1b167a37d7291eaeb8d5 366 Gene3D G3DSA:3.40.190.10 41 341 1.9E-116 T 14-10-2018 TMO_0373 5d40c8e52baa1b167a37d7291eaeb8d5 366 SUPERFAMILY SSF53850 41 307 6.85E-42 T 14-10-2018 TMO_0373 5d40c8e52baa1b167a37d7291eaeb8d5 366 Pfam PF13416 Bacterial extracellular solute-binding protein 55 297 2.2E-15 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_1833 350b3344368391f57723662a51b89808 608 Pfam PF01336 OB-fold nucleic acid binding domain 21 102 2.2E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TMO_1833 350b3344368391f57723662a51b89808 608 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 560 1.4E-94 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1833 350b3344368391f57723662a51b89808 608 Pfam PF02938 GAD domain 315 406 7.1E-14 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 TMO_1833 350b3344368391f57723662a51b89808 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 6.0E-22 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1833 350b3344368391f57723662a51b89808 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 6.0E-22 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1833 350b3344368391f57723662a51b89808 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 6.0E-22 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1833 350b3344368391f57723662a51b89808 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 6.0E-22 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1833 350b3344368391f57723662a51b89808 608 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 4 587 31.145 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TMO_1833 350b3344368391f57723662a51b89808 608 Gene3D G3DSA:3.30.1360.30 279 422 7.8E-168 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TMO_1833 350b3344368391f57723662a51b89808 608 SUPERFAMILY SSF55681 115 587 1.08E-98 T 14-10-2018 TMO_1833 350b3344368391f57723662a51b89808 608 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 586 3.3E-190 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TMO_1833 350b3344368391f57723662a51b89808 608 Gene3D G3DSA:3.30.930.10 122 585 7.8E-168 T 14-10-2018 TMO_1833 350b3344368391f57723662a51b89808 608 SUPERFAMILY SSF50249 4 107 5.52E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_1833 350b3344368391f57723662a51b89808 608 SUPERFAMILY SSF55261 297 422 1.8E-36 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TMO_1833 350b3344368391f57723662a51b89808 608 Gene3D G3DSA:2.40.50.140 1 106 9.3E-35 T 14-10-2018 TMO_b0419 f2d8e3537dea8505976954d5dd6d75ef 198 SUPERFAMILY SSF52096 7 196 1.32E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_b0419 f2d8e3537dea8505976954d5dd6d75ef 198 Pfam PF00574 Clp protease 17 196 3.4E-79 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TMO_b0419 f2d8e3537dea8505976954d5dd6d75ef 198 Gene3D G3DSA:3.90.226.10 2 198 2.1E-83 T 14-10-2018 TMO_b0419 f2d8e3537dea8505976954d5dd6d75ef 198 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 116 129 - T 14-10-2018 IPR033135 ClpP, histidine active site TMO_b0419 f2d8e3537dea8505976954d5dd6d75ef 198 PRINTS PR00127 Clp protease catalytic subunit P signature 115 134 3.1E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_b0419 f2d8e3537dea8505976954d5dd6d75ef 198 PRINTS PR00127 Clp protease catalytic subunit P signature 172 191 3.1E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_b0419 f2d8e3537dea8505976954d5dd6d75ef 198 PRINTS PR00127 Clp protease catalytic subunit P signature 94 111 3.1E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_b0419 f2d8e3537dea8505976954d5dd6d75ef 198 PRINTS PR00127 Clp protease catalytic subunit P signature 23 38 3.1E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_b0419 f2d8e3537dea8505976954d5dd6d75ef 198 PRINTS PR00127 Clp protease catalytic subunit P signature 63 83 3.1E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_b0419 f2d8e3537dea8505976954d5dd6d75ef 198 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 7 197 40.442 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_0658 39c2b041a6efafbf80fe4d7162a94f26 191 SUPERFAMILY SSF55729 21 183 1.15E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_0658 39c2b041a6efafbf80fe4d7162a94f26 191 Pfam PF13420 Acetyltransferase (GNAT) domain 21 176 2.8E-24 T 14-10-2018 TMO_0658 39c2b041a6efafbf80fe4d7162a94f26 191 Gene3D G3DSA:3.40.630.30 18 191 3.6E-46 T 14-10-2018 TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 561 887 1.0E-126 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 449 557 5.0E-28 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 318 330 3.2E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 299 314 3.2E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 263 273 3.2E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 181 196 3.2E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 Gene3D G3DSA:1.10.1740.60 201 284 2.3E-40 T 14-10-2018 TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 SUPERFAMILY SSF63737 7 198 2.62E-41 T 14-10-2018 TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 Gene3D G3DSA:1.25.50.10 560 887 1.8E-126 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 Gene3D G3DSA:2.60.40.1730 16 199 4.1E-65 T 14-10-2018 TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 14 886 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 Gene3D G3DSA:1.10.390.10 285 448 2.2E-64 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 SUPERFAMILY SSF55486 208 456 6.96E-77 T 14-10-2018 TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 Pfam PF01433 Peptidase family M1 domain 213 443 4.8E-58 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TMO_1210 c49115d0d86beccdebf52aabae4404e2 887 Gene3D G3DSA:2.60.40.1840 449 558 2.5E-31 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily TMO_a0159 98c0c97bda8d6b85557d011a2edb2967 306 Gene3D G3DSA:3.20.20.60 1 306 1.2E-80 T 14-10-2018 TMO_a0159 98c0c97bda8d6b85557d011a2edb2967 306 PIRSF PIRSF015582 1 306 5.5E-69 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like TMO_a0159 98c0c97bda8d6b85557d011a2edb2967 306 SUPERFAMILY SSF51621 4 251 7.53E-51 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_a0159 98c0c97bda8d6b85557d011a2edb2967 306 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 5 239 8.5E-31 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_c0286 720038f60464a87375497d6f7c78a3fc 308 Gene3D G3DSA:3.40.190.10 167 274 1.7E-48 T 14-10-2018 TMO_c0286 720038f60464a87375497d6f7c78a3fc 308 Gene3D G3DSA:1.10.10.10 7 93 3.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0286 720038f60464a87375497d6f7c78a3fc 308 SUPERFAMILY SSF46785 9 114 3.08E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0286 720038f60464a87375497d6f7c78a3fc 308 Gene3D G3DSA:3.40.190.10 94 298 1.7E-48 T 14-10-2018 TMO_c0286 720038f60464a87375497d6f7c78a3fc 308 SUPERFAMILY SSF53850 91 305 3.1E-35 T 14-10-2018 TMO_c0286 720038f60464a87375497d6f7c78a3fc 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 5.7E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0286 720038f60464a87375497d6f7c78a3fc 308 Pfam PF03466 LysR substrate binding domain 91 303 5.3E-33 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 Gene3D G3DSA:3.30.70.270 432 595 7.3E-40 T 14-10-2018 TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 Gene3D G3DSA:3.20.20.450 604 856 3.8E-95 T 14-10-2018 IPR035919 EAL domain superfamily TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 Gene3D G3DSA:2.60.40.2380 52 196 5.0E-17 T 14-10-2018 TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 SMART SM00267 427 593 1.2E-28 T 14-10-2018 IPR000160 GGDEF domain TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 Pfam PF07695 7TM diverse intracellular signalling 202 404 7.5E-24 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 SUPERFAMILY SSF141868 609 855 2.35E-85 T 14-10-2018 IPR035919 EAL domain superfamily TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 Pfam PF07696 7TMR-DISM extracellular 2 54 180 7.4E-23 T 14-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 Pfam PF00990 Diguanylate cyclase, GGDEF domain 438 584 2.4E-29 T 14-10-2018 IPR000160 GGDEF domain TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 Pfam PF00563 EAL domain 609 843 8.9E-74 T 14-10-2018 IPR001633 EAL domain TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 436 584 1.6E-21 T 14-10-2018 IPR000160 GGDEF domain TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 SUPERFAMILY SSF55073 443 588 2.28E-33 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_c0311 27f597f60f9f04f5833b5cf254f96118 884 SMART SM00052 603 848 2.7E-106 T 14-10-2018 IPR001633 EAL domain TMO_1918 af1410f84788c42e574767402c583a78 431 PRINTS PR00812 Bacterial general secretion pathway protein F signature 194 222 4.3E-6 T 14-10-2018 IPR003004 GspF/PilC family TMO_1918 af1410f84788c42e574767402c583a78 431 PRINTS PR00812 Bacterial general secretion pathway protein F signature 394 408 4.3E-6 T 14-10-2018 IPR003004 GspF/PilC family TMO_1918 af1410f84788c42e574767402c583a78 431 Gene3D G3DSA:1.20.81.30 91 201 2.0E-8 T 14-10-2018 TMO_1918 af1410f84788c42e574767402c583a78 431 Pfam PF00482 Type II secretion system (T2SS), protein F 300 414 9.0E-13 T 14-10-2018 IPR018076 Type II secretion system F domain TMO_1918 af1410f84788c42e574767402c583a78 431 Pfam PF00482 Type II secretion system (T2SS), protein F 105 222 4.4E-13 T 14-10-2018 IPR018076 Type II secretion system F domain TMO_1918 af1410f84788c42e574767402c583a78 431 Gene3D G3DSA:1.20.81.30 287 392 8.0E-9 T 14-10-2018 TMO_2709 c67590bed6347e62013e858e63fefce3 451 SMART SM00283 190 444 2.7E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2709 c67590bed6347e62013e858e63fefce3 451 Gene3D G3DSA:1.10.287.950 165 450 5.7E-50 T 14-10-2018 TMO_2709 c67590bed6347e62013e858e63fefce3 451 SUPERFAMILY SSF58104 171 443 1.2E-54 T 14-10-2018 TMO_2709 c67590bed6347e62013e858e63fefce3 451 SUPERFAMILY SSF46458 10 158 3.02E-7 T 14-10-2018 IPR009050 Globin-like superfamily TMO_2709 c67590bed6347e62013e858e63fefce3 451 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 263 405 2.9E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2709 c67590bed6347e62013e858e63fefce3 451 Pfam PF11563 Protoglobin 11 165 2.1E-13 T 14-10-2018 TMO_2709 c67590bed6347e62013e858e63fefce3 451 Gene3D G3DSA:1.10.490.10 10 164 1.4E-14 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_b0331 937e5f5c4ceb7c7e670fe5e19e1fd656 809 Gene3D G3DSA:2.40.170.20 264 809 7.5E-139 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_b0331 937e5f5c4ceb7c7e670fe5e19e1fd656 809 Pfam PF07660 Secretin and TonB N terminus short domain 62 107 3.2E-9 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_b0331 937e5f5c4ceb7c7e670fe5e19e1fd656 809 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 155 808 1.8E-125 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_b0331 937e5f5c4ceb7c7e670fe5e19e1fd656 809 Gene3D G3DSA:2.170.130.10 131 263 8.9E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_b0331 937e5f5c4ceb7c7e670fe5e19e1fd656 809 SUPERFAMILY SSF56935 141 809 5.27E-135 T 14-10-2018 TMO_b0331 937e5f5c4ceb7c7e670fe5e19e1fd656 809 Pfam PF07715 TonB-dependent Receptor Plug Domain 154 253 2.8E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_b0331 937e5f5c4ceb7c7e670fe5e19e1fd656 809 Gene3D G3DSA:3.55.50.30 29 129 1.6E-28 T 14-10-2018 TMO_b0331 937e5f5c4ceb7c7e670fe5e19e1fd656 809 SMART SM00965 58 109 5.9E-13 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_b0331 937e5f5c4ceb7c7e670fe5e19e1fd656 809 Pfam PF00593 TonB dependent receptor 346 808 4.6E-57 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_a0251 fa2eca1aaf9ff9250bea0564ebebac6d 326 Gene3D G3DSA:3.40.309.10 93 274 3.6E-45 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_a0251 fa2eca1aaf9ff9250bea0564ebebac6d 326 SUPERFAMILY SSF53720 1 318 1.7E-59 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_a0251 fa2eca1aaf9ff9250bea0564ebebac6d 326 Gene3D G3DSA:3.40.605.10 1 92 1.7E-18 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_a0251 fa2eca1aaf9ff9250bea0564ebebac6d 326 Pfam PF00171 Aldehyde dehydrogenase family 1 236 1.0E-18 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_3147 3476ec3a08264c158f3ffacd7994b2e7 408 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 404 1.6E-184 T 14-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase TMO_3147 3476ec3a08264c158f3ffacd7994b2e7 408 SUPERFAMILY SSF53474 90 403 1.6E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3147 3476ec3a08264c158f3ffacd7994b2e7 408 Pfam PF06850 PHB de-polymerase C-terminus 204 404 5.8E-96 T 14-10-2018 IPR009656 PHB de-polymerase, C-terminal TMO_3147 3476ec3a08264c158f3ffacd7994b2e7 408 PIRSF PIRSF020818 1 408 2.5E-192 T 14-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase TMO_d0062 0882142279985c1cb0ae059e09251c12 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 59 2.5E-18 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 TMO_1278 e1bb8f0a7beef836b4a660faa9c71e0d 385 Gene3D G3DSA:3.20.20.70 30 383 1.5E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1278 e1bb8f0a7beef836b4a660faa9c71e0d 385 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 31 368 3.6E-58 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TMO_1278 e1bb8f0a7beef836b4a660faa9c71e0d 385 SUPERFAMILY SSF51395 29 382 9.87E-107 T 14-10-2018 TMO_b0094 264a2d463ce202d0ad14a73a705b33d2 333 PIRSF PIRSF029792 1 333 5.5E-134 T 14-10-2018 IPR008794 Proline racemase family TMO_b0094 264a2d463ce202d0ad14a73a705b33d2 333 SUPERFAMILY SSF54506 3 330 2.54E-118 T 14-10-2018 TMO_b0094 264a2d463ce202d0ad14a73a705b33d2 333 Gene3D G3DSA:3.10.310.10 6 332 6.4E-117 T 14-10-2018 TMO_b0094 264a2d463ce202d0ad14a73a705b33d2 333 Gene3D G3DSA:3.10.310.10 144 309 6.4E-117 T 14-10-2018 TMO_b0094 264a2d463ce202d0ad14a73a705b33d2 333 Pfam PF05544 Proline racemase 8 331 3.0E-143 T 14-10-2018 IPR008794 Proline racemase family TMO_0028 4e67785c1f3a7b507325719bb78a1e8b 175 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 146 157 7.2E-12 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_0028 4e67785c1f3a7b507325719bb78a1e8b 175 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 64 83 7.2E-12 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_0028 4e67785c1f3a7b507325719bb78a1e8b 175 SUPERFAMILY SSF53671 17 162 1.33E-53 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TMO_0028 4e67785c1f3a7b507325719bb78a1e8b 175 PRINTS PR00102 Ornithine carbamoyltransferase signature 135 149 2.0E-19 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TMO_0028 4e67785c1f3a7b507325719bb78a1e8b 175 PRINTS PR00102 Ornithine carbamoyltransferase signature 62 76 2.0E-19 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TMO_0028 4e67785c1f3a7b507325719bb78a1e8b 175 PRINTS PR00102 Ornithine carbamoyltransferase signature 95 108 2.0E-19 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TMO_0028 4e67785c1f3a7b507325719bb78a1e8b 175 Gene3D G3DSA:3.40.50.1370 6 172 4.0E-61 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TMO_0028 4e67785c1f3a7b507325719bb78a1e8b 175 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 64 71 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_0028 4e67785c1f3a7b507325719bb78a1e8b 175 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 19 159 3.9E-53 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TMO_c0239 9e1e2b0b8f0ae889d2b490de73990e29 336 Gene3D G3DSA:3.30.465.10 109 234 2.3E-38 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TMO_c0239 9e1e2b0b8f0ae889d2b490de73990e29 336 Gene3D G3DSA:3.30.43.10 26 105 3.3E-20 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 TMO_c0239 9e1e2b0b8f0ae889d2b490de73990e29 336 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 47 318 1.5E-54 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0239 9e1e2b0b8f0ae889d2b490de73990e29 336 Pfam PF01565 FAD binding domain 56 184 3.9E-20 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TMO_c0239 9e1e2b0b8f0ae889d2b490de73990e29 336 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 219 317 3.9E-30 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0239 9e1e2b0b8f0ae889d2b490de73990e29 336 SUPERFAMILY SSF56176 44 227 1.13E-44 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_c0239 9e1e2b0b8f0ae889d2b490de73990e29 336 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 336 94.668 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0239 9e1e2b0b8f0ae889d2b490de73990e29 336 SUPERFAMILY SSF56194 214 318 8.63E-36 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0239 9e1e2b0b8f0ae889d2b490de73990e29 336 Gene3D G3DSA:3.90.78.10 235 322 4.2E-31 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0818 4026c97a8e03fb486de7cffbead0bc76 307 Gene3D G3DSA:3.10.310.10 39 146 2.4E-59 T 14-10-2018 TMO_c0818 4026c97a8e03fb486de7cffbead0bc76 307 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 27 289 5.1E-40 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_c0818 4026c97a8e03fb486de7cffbead0bc76 307 SUPERFAMILY SSF54506 28 302 6.15E-49 T 14-10-2018 TMO_c0818 4026c97a8e03fb486de7cffbead0bc76 307 Pfam PF02567 Phenazine biosynthesis-like protein 32 289 1.7E-49 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_c0818 4026c97a8e03fb486de7cffbead0bc76 307 Gene3D G3DSA:3.10.310.10 147 301 2.4E-59 T 14-10-2018 TMO_c0818 4026c97a8e03fb486de7cffbead0bc76 307 PIRSF PIRSF016184 25 305 8.6E-51 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_0271 fe781a31ccff768e08a4661c7e0734e5 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 322 2.0E-45 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0271 fe781a31ccff768e08a4661c7e0734e5 325 Gene3D G3DSA:1.10.3720.10 89 317 3.3E-26 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0271 fe781a31ccff768e08a4661c7e0734e5 325 SUPERFAMILY SSF161098 94 307 2.62E-20 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 SUPERFAMILY SSF81653 245 338 2.62E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 SUPERFAMILY SSF56784 438 739 2.25E-47 T 14-10-2018 IPR036412 HAD-like superfamily TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 211 718 1.0E-78 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 SUPERFAMILY SSF55008 13 80 5.24E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 Pfam PF00403 Heavy-metal-associated domain 20 79 5.9E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 Gene3D G3DSA:3.30.70.100 19 83 1.2E-18 T 14-10-2018 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 288 302 4.1E-27 T 14-10-2018 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 564 575 4.1E-27 T 14-10-2018 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 658 4.1E-27 T 14-10-2018 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 438 452 4.1E-27 T 14-10-2018 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 586 596 4.1E-27 T 14-10-2018 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 662 674 4.1E-27 T 14-10-2018 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 Pfam PF00702 haloacid dehalogenase-like hydrolase 434 653 3.6E-38 T 14-10-2018 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 SUPERFAMILY SSF81665 186 430 9.02E-15 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 ProSitePatterns PS01047 Heavy-metal-associated domain. 22 51 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 440 446 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 156 741 2.3E-154 T 14-10-2018 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 Pfam PF00122 E1-E2 ATPase 238 417 4.7E-55 T 14-10-2018 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 Gene3D G3DSA:3.40.50.1000 419 691 1.7E-69 T 14-10-2018 IPR023214 HAD superfamily TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 Gene3D G3DSA:3.40.1110.10 449 571 1.7E-69 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 Gene3D G3DSA:2.70.150.20 231 343 4.7E-37 T 14-10-2018 TMO_1757 a6d074789ddbd5f1317de0157e284ee7 754 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 174 741 6.6E-165 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_3375 a7519c47f4112fc1d7b6958cd87bf91e 174 Pfam PF06114 IrrE N-terminal-like domain 46 170 1.7E-20 T 14-10-2018 IPR010359 IrrE N-terminal-like domain TMO_3375 a7519c47f4112fc1d7b6958cd87bf91e 174 Gene3D G3DSA:3.40.390.50 66 135 4.0E-11 T 14-10-2018 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 30 51 3.5E-18 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 277 295 3.5E-18 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 298 316 3.5E-18 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 255 272 3.5E-18 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 74 93 3.5E-18 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 55 73 3.5E-18 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 Gene3D G3DSA:3.40.50.1980 195 320 5.4E-49 T 14-10-2018 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 Gene3D G3DSA:3.40.50.1980 31 192 7.9E-53 T 14-10-2018 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 SUPERFAMILY SSF53807 26 319 3.14E-92 T 14-10-2018 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00690 Adhesin family signature 74 91 1.6E-19 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00690 Adhesin family signature 285 304 1.6E-19 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00690 Adhesin family signature 259 277 1.6E-19 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00690 Adhesin family signature 61 74 1.6E-19 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00690 Adhesin family signature 30 48 1.6E-19 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TMO_1282 364153273c2bbc69e19e8de4b91b0f14 321 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 317 3.0E-86 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TMO_1975 bb1ebf0cf5158cf88e409bd33e5518ab 395 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 125 395 9.4E-125 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1975 bb1ebf0cf5158cf88e409bd33e5518ab 395 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 4 395 50.313 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1975 bb1ebf0cf5158cf88e409bd33e5518ab 395 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 48 59 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1975 bb1ebf0cf5158cf88e409bd33e5518ab 395 Gene3D G3DSA:1.10.645.20 9 395 6.2E-181 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1975 bb1ebf0cf5158cf88e409bd33e5518ab 395 SUPERFAMILY SSF56762 21 395 1.2E-144 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1975 bb1ebf0cf5158cf88e409bd33e5518ab 395 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 11 395 1.4E-185 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_3309 7c058a56f3914fb2a9897d2b3ca6e5a6 151 Gene3D G3DSA:3.20.20.70 1 145 1.7E-33 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3309 7c058a56f3914fb2a9897d2b3ca6e5a6 151 Pfam PF03060 Nitronate monooxygenase 2 137 3.6E-24 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_3309 7c058a56f3914fb2a9897d2b3ca6e5a6 151 SUPERFAMILY SSF51412 2 77 3.21E-16 T 14-10-2018 TMO_0294 8d2bf1e074dcb39860c0127db05a52cb 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 290 1.1E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0294 8d2bf1e074dcb39860c0127db05a52cb 292 Gene3D G3DSA:1.10.3720.10 77 284 2.9E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0294 8d2bf1e074dcb39860c0127db05a52cb 292 SUPERFAMILY SSF161098 83 289 3.79E-28 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0765 d348e557e794f72aae22152eeba91364 426 PIRSF PIRSF000018 29 425 1.5E-119 T 14-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 TMO_c0765 d348e557e794f72aae22152eeba91364 426 SUPERFAMILY SSF46626 39 174 1.85E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0765 d348e557e794f72aae22152eeba91364 426 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 322 404 2.9E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0765 d348e557e794f72aae22152eeba91364 426 SUPERFAMILY SSF46626 322 420 1.55E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0765 d348e557e794f72aae22152eeba91364 426 SUPERFAMILY SSF46626 201 309 1.33E-12 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0765 d348e557e794f72aae22152eeba91364 426 Gene3D G3DSA:1.10.760.10 309 426 2.2E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0765 d348e557e794f72aae22152eeba91364 426 Pfam PF00034 Cytochrome c 51 151 3.8E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0765 d348e557e794f72aae22152eeba91364 426 Gene3D G3DSA:1.10.760.10 167 307 2.1E-9 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0765 d348e557e794f72aae22152eeba91364 426 Gene3D G3DSA:1.10.760.10 2 162 6.1E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_0731 2b76e9659171301da4b77e6839c11c13 421 Pfam PF07690 Major Facilitator Superfamily 43 288 3.6E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0731 2b76e9659171301da4b77e6839c11c13 421 Gene3D G3DSA:1.20.1250.20 32 414 3.3E-48 T 14-10-2018 TMO_0731 2b76e9659171301da4b77e6839c11c13 421 SUPERFAMILY SSF103473 22 417 4.05E-57 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0315 b7fe70abb9aaed4bd8d6bf0b9e2d0897 118 Pfam PF04380 Membrane fusogenic activity 2 78 1.3E-21 T 14-10-2018 IPR007475 Membrane fusogenic activity TMO_d0035 b9012c486868861636706d3112585d1c 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_d0035 b9012c486868861636706d3112585d1c 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_d0035 b9012c486868861636706d3112585d1c 251 SMART SM00420 6 58 1.7E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_d0035 b9012c486868861636706d3112585d1c 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.1E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_d0035 b9012c486868861636706d3112585d1c 251 SUPERFAMILY SSF46785 4 61 1.08E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_d0035 b9012c486868861636706d3112585d1c 251 SMART SM01134 72 234 1.4E-59 T 14-10-2018 TMO_d0035 b9012c486868861636706d3112585d1c 251 SUPERFAMILY SSF100950 75 233 4.69E-26 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_d0035 b9012c486868861636706d3112585d1c 251 Pfam PF00455 DeoR C terminal sensor domain 74 232 6.0E-46 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain TMO_d0035 b9012c486868861636706d3112585d1c 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 TMO_d0035 b9012c486868861636706d3112585d1c 251 Gene3D G3DSA:1.10.10.10 1 55 2.1E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2140 385a372042ce8cfbe0ecef3b75d9dad6 127 SUPERFAMILY SSF47240 7 93 1.48E-19 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_2140 385a372042ce8cfbe0ecef3b75d9dad6 127 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 7 124 6.0E-39 T 14-10-2018 IPR030907 Ferritin-like protein TMO_2293 289c604bcbdeb66d57a309f0e1b04f67 523 Pfam PF00857 Isochorismatase family 322 498 8.2E-29 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_2293 289c604bcbdeb66d57a309f0e1b04f67 523 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 27 256 1.8E-51 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 TMO_2293 289c604bcbdeb66d57a309f0e1b04f67 523 SUPERFAMILY SSF52499 317 521 1.44E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_2293 289c604bcbdeb66d57a309f0e1b04f67 523 Gene3D G3DSA:3.40.1280.10 22 187 3.8E-53 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_2293 289c604bcbdeb66d57a309f0e1b04f67 523 Gene3D G3DSA:1.10.8.590 190 269 1.8E-7 T 14-10-2018 TMO_2293 289c604bcbdeb66d57a309f0e1b04f67 523 SUPERFAMILY SSF75217 25 183 1.37E-31 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases TMO_2293 289c604bcbdeb66d57a309f0e1b04f67 523 Pfam PF00588 SpoU rRNA Methylase family 27 177 2.5E-27 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TMO_2293 289c604bcbdeb66d57a309f0e1b04f67 523 Gene3D G3DSA:3.40.50.850 319 522 8.0E-73 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_1477 85a9fb690c528ffff8123e33e78e1065 267 SUPERFAMILY SSF52833 32 192 4.55E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_1477 85a9fb690c528ffff8123e33e78e1065 267 Gene3D G3DSA:3.40.30.10 35 206 1.4E-32 T 14-10-2018 TMO_2447 cc023821a00a5b7ad1962dd2275ce9d0 95 Gene3D G3DSA:3.30.70.1060 1 93 2.0E-24 T 14-10-2018 TMO_2447 cc023821a00a5b7ad1962dd2275ce9d0 95 Pfam PF03795 YCII-related domain 1 91 4.4E-15 T 14-10-2018 IPR005545 YCII-related TMO_2447 cc023821a00a5b7ad1962dd2275ce9d0 95 SUPERFAMILY SSF54909 1 92 2.63E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_b0255 d3dc238b6862fdc4ebce93f2b1dd7634 242 Gene3D G3DSA:3.40.50.1860 111 227 3.2E-48 T 14-10-2018 TMO_b0255 d3dc238b6862fdc4ebce93f2b1dd7634 242 Gene3D G3DSA:3.40.50.1860 16 234 3.2E-48 T 14-10-2018 TMO_b0255 d3dc238b6862fdc4ebce93f2b1dd7634 242 SUPERFAMILY SSF53681 133 239 9.16E-20 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TMO_b0255 d3dc238b6862fdc4ebce93f2b1dd7634 242 Pfam PF01177 Asp/Glu/Hydantoin racemase 19 236 3.9E-34 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TMO_b0255 d3dc238b6862fdc4ebce93f2b1dd7634 242 SUPERFAMILY SSF53681 16 114 1.29E-16 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TMO_b0255 d3dc238b6862fdc4ebce93f2b1dd7634 242 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 205 215 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 Gene3D G3DSA:3.30.1360.200 159 272 3.0E-36 T 14-10-2018 TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 206 436 5.6E-80 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 584 745 3.8E-48 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 Gene3D G3DSA:1.20.1640.10 281 457 1.1E-14 T 14-10-2018 TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 458 41.847 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 Gene3D G3DSA:1.20.1640.10 570 766 2.6E-14 T 14-10-2018 TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 476 759 26.276 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 504 748 6.2E-69 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 442 4.3E-141 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 Pfam PF07549 SecD/SecF GG Motif 500 518 5.7E-5 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 Pfam PF07549 SecD/SecF GG Motif 38 63 8.7E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 PRINTS PR01755 Bacterial translocase SecF protein signature 503 518 1.5E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 PRINTS PR01755 Bacterial translocase SecF protein signature 616 630 1.5E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 PRINTS PR01755 Bacterial translocase SecF protein signature 664 682 1.5E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 PRINTS PR01755 Bacterial translocase SecF protein signature 696 711 1.5E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 SUPERFAMILY SSF82866 253 450 4.19E-42 T 14-10-2018 TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 SUPERFAMILY SSF82866 545 759 2.22E-39 T 14-10-2018 TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 Gene3D G3DSA:3.30.70.3400 46 143 1.3E-23 T 14-10-2018 TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 Pfam PF02355 Protein export membrane protein 572 756 5.1E-61 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TMO_c0594 50b918513d97b1bbf08ace4361868d01 778 Pfam PF02355 Protein export membrane protein 277 444 2.3E-16 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TMO_2844 900752860a43fdca9ef7bc8bc81205b6 359 Pfam PF08402 TOBE domain 277 352 8.6E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_2844 900752860a43fdca9ef7bc8bc81205b6 359 SUPERFAMILY SSF52540 4 241 2.18E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2844 900752860a43fdca9ef7bc8bc81205b6 359 Gene3D G3DSA:2.40.50.140 283 345 4.3E-10 T 14-10-2018 TMO_2844 900752860a43fdca9ef7bc8bc81205b6 359 SMART SM00382 28 211 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2844 900752860a43fdca9ef7bc8bc81205b6 359 Pfam PF00005 ABC transporter 20 161 4.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2844 900752860a43fdca9ef7bc8bc81205b6 359 SUPERFAMILY SSF50331 238 352 2.21E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_2844 900752860a43fdca9ef7bc8bc81205b6 359 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2844 900752860a43fdca9ef7bc8bc81205b6 359 Gene3D G3DSA:3.40.50.300 2 221 1.1E-67 T 14-10-2018 TMO_2844 900752860a43fdca9ef7bc8bc81205b6 359 Gene3D G3DSA:2.40.50.940 222 350 4.3E-10 T 14-10-2018 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 Gene3D G3DSA:2.170.120.12 56 176 6.6E-81 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 6 318 35.653 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 SMART SM00662 26 233 7.8E-82 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 SUPERFAMILY SSF55257 16 236 5.63E-28 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 32 227 5.8E-22 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 258 329 7.0E-32 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 SUPERFAMILY SSF47789 251 327 1.57E-26 T 14-10-2018 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 317 1.7E-112 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 SUPERFAMILY SSF56553 56 177 3.45E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 Gene3D G3DSA:3.30.1360.10 25 227 6.6E-81 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 Gene3D G3DSA:1.10.150.20 245 330 3.9E-37 T 14-10-2018 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 309 1.5E-25 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2608 dc3f9df5b79902a2905903b9a2101dfd 338 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 65 158 2.6E-19 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_1559 6cefdc1e1a822393606fe4e0da88aa77 448 SUPERFAMILY SSF55031 227 336 4.49E-12 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TMO_1559 6cefdc1e1a822393606fe4e0da88aa77 448 Gene3D G3DSA:3.40.630.10 49 442 1.8E-153 T 14-10-2018 TMO_1559 6cefdc1e1a822393606fe4e0da88aa77 448 Pfam PF07687 Peptidase dimerisation domain 224 338 3.9E-20 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain TMO_1559 6cefdc1e1a822393606fe4e0da88aa77 448 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 42 427 1.7E-91 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase TMO_1559 6cefdc1e1a822393606fe4e0da88aa77 448 Gene3D G3DSA:3.30.70.360 227 354 1.8E-153 T 14-10-2018 TMO_1559 6cefdc1e1a822393606fe4e0da88aa77 448 SUPERFAMILY SSF53187 28 442 2.86E-57 T 14-10-2018 TMO_1559 6cefdc1e1a822393606fe4e0da88aa77 448 Pfam PF01546 Peptidase family M20/M25/M40 120 438 6.1E-28 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 TMO_2014 e12d931ccfef5d2185eed7ecf78f891e 319 Gene3D G3DSA:3.40.50.1820 46 318 1.6E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2014 e12d931ccfef5d2185eed7ecf78f891e 319 Pfam PF00756 Putative esterase 69 271 1.4E-15 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 TMO_2014 e12d931ccfef5d2185eed7ecf78f891e 319 SUPERFAMILY SSF53474 54 315 6.73E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0097 1ba358861a293a3b5f47700f77bfbe80 137 Pfam PF08786 DcrB 6 133 5.2E-35 T 14-10-2018 IPR014894 Protein DcrB TMO_a0097 1ba358861a293a3b5f47700f77bfbe80 137 SUPERFAMILY SSF55724 1 135 3.4E-33 T 14-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich TMO_a0097 1ba358861a293a3b5f47700f77bfbe80 137 Gene3D G3DSA:3.40.1000.10 1 137 1.4E-37 T 14-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich TMO_0603 40e07222769c45e8c3d142ead7f082ae 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 450 469 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TMO_0603 40e07222769c45e8c3d142ead7f082ae 574 Gene3D G3DSA:3.40.50.970 391 571 1.2E-54 T 14-10-2018 TMO_0603 40e07222769c45e8c3d142ead7f082ae 574 SUPERFAMILY SSF52467 165 380 1.7E-32 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_0603 40e07222769c45e8c3d142ead7f082ae 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 414 561 3.8E-43 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_0603 40e07222769c45e8c3d142ead7f082ae 574 Gene3D G3DSA:3.40.50.1220 210 380 5.4E-33 T 14-10-2018 TMO_0603 40e07222769c45e8c3d142ead7f082ae 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 215 353 8.1E-24 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TMO_0603 40e07222769c45e8c3d142ead7f082ae 574 SUPERFAMILY SSF52518 393 568 2.14E-54 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_0603 40e07222769c45e8c3d142ead7f082ae 574 Gene3D G3DSA:3.40.50.970 4 188 5.7E-49 T 14-10-2018 TMO_0603 40e07222769c45e8c3d142ead7f082ae 574 SUPERFAMILY SSF52518 10 182 2.25E-45 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_0603 40e07222769c45e8c3d142ead7f082ae 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 182 6.7E-45 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TMO_2352 c0a7e884da6dabf1e25ec4c2fa8087ae 345 PIRSF PIRSF001439 6 336 5.0E-58 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 TMO_2352 c0a7e884da6dabf1e25ec4c2fa8087ae 345 Gene3D G3DSA:3.30.1780.10 18 330 3.8E-78 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 TMO_2352 c0a7e884da6dabf1e25ec4c2fa8087ae 345 TIGRFAM TIGR03944 dehyd_SbnB_fam: 2,3-diaminopropionate biosynthesis protein SbnB 12 336 2.5E-118 T 14-10-2018 IPR023866 2,3-diaminopropionate biosynthesis protein SbnB TMO_2352 c0a7e884da6dabf1e25ec4c2fa8087ae 345 SUPERFAMILY SSF51735 11 335 7.69E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2352 c0a7e884da6dabf1e25ec4c2fa8087ae 345 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 53 320 1.1E-26 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 TMO_2352 c0a7e884da6dabf1e25ec4c2fa8087ae 345 Gene3D G3DSA:3.40.50.720 141 309 3.8E-78 T 14-10-2018 TMO_3379 5feaed44216a2244cafd4ca1fceaab9b 290 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 240 253 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_3379 5feaed44216a2244cafd4ca1fceaab9b 290 Pfam PF00294 pfkB family carbohydrate kinase 8 284 2.4E-29 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB TMO_3379 5feaed44216a2244cafd4ca1fceaab9b 290 SUPERFAMILY SSF53613 7 283 4.21E-46 T 14-10-2018 IPR029056 Ribokinase-like TMO_3379 5feaed44216a2244cafd4ca1fceaab9b 290 PRINTS PR00990 Ribokinase signature 38 57 3.9E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 TMO_3379 5feaed44216a2244cafd4ca1fceaab9b 290 PRINTS PR00990 Ribokinase signature 209 220 3.9E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 TMO_3379 5feaed44216a2244cafd4ca1fceaab9b 290 PRINTS PR00990 Ribokinase signature 11 32 3.9E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 TMO_3379 5feaed44216a2244cafd4ca1fceaab9b 290 Gene3D G3DSA:3.40.1190.20 6 288 5.0E-49 T 14-10-2018 IPR029056 Ribokinase-like TMO_0466 da11afff5d0e3d4d008f996c3effcfed 427 SUPERFAMILY SSF53822 52 421 9.42E-84 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_0466 da11afff5d0e3d4d008f996c3effcfed 427 Gene3D G3DSA:3.40.50.2300 75 379 8.4E-103 T 14-10-2018 TMO_0466 da11afff5d0e3d4d008f996c3effcfed 427 Pfam PF13458 Periplasmic binding protein 52 386 1.2E-80 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_0466 da11afff5d0e3d4d008f996c3effcfed 427 Gene3D G3DSA:3.40.50.2300 171 386 8.4E-103 T 14-10-2018 TMO_a0016 5d4854e47e722afd3e02add88ce7043b 321 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 230 315 2.0E-11 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_a0016 5d4854e47e722afd3e02add88ce7043b 321 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 172 6.1E-45 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_a0016 5d4854e47e722afd3e02add88ce7043b 321 SUPERFAMILY SSF52540 9 180 1.02E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0016 5d4854e47e722afd3e02add88ce7043b 321 SMART SM00833 229 319 5.2E-8 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_a0016 5d4854e47e722afd3e02add88ce7043b 321 Gene3D G3DSA:3.40.50.300 8 203 9.9E-52 T 14-10-2018 TMO_a0016 5d4854e47e722afd3e02add88ce7043b 321 SUPERFAMILY SSF90002 230 315 5.23E-9 T 14-10-2018 TMO_c0457 377299d597fe28cf73679944127ebddf 472 Gene3D G3DSA:3.50.50.100 27 438 7.3E-115 T 14-10-2018 TMO_c0457 377299d597fe28cf73679944127ebddf 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 30 52 1.0E-7 T 14-10-2018 TMO_c0457 377299d597fe28cf73679944127ebddf 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 332 339 1.0E-7 T 14-10-2018 TMO_c0457 377299d597fe28cf73679944127ebddf 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 1.0E-7 T 14-10-2018 TMO_c0457 377299d597fe28cf73679944127ebddf 472 SUPERFAMILY SSF51905 29 234 1.13E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0457 377299d597fe28cf73679944127ebddf 472 SUPERFAMILY SSF51905 178 373 2.73E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0457 377299d597fe28cf73679944127ebddf 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 317 339 4.3E-10 T 14-10-2018 TMO_c0457 377299d597fe28cf73679944127ebddf 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 4.3E-10 T 14-10-2018 TMO_c0457 377299d597fe28cf73679944127ebddf 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 31 50 4.3E-10 T 14-10-2018 TMO_c0457 377299d597fe28cf73679944127ebddf 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 122 140 4.3E-10 T 14-10-2018 TMO_c0457 377299d597fe28cf73679944127ebddf 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 30 360 3.0E-49 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_c0754 f089b0279d43bc6d643e4ed60342817b 289 Gene3D G3DSA:3.40.190.10 161 258 9.4E-62 T 14-10-2018 TMO_c0754 f089b0279d43bc6d643e4ed60342817b 289 Gene3D G3DSA:1.10.10.10 4 86 7.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0754 f089b0279d43bc6d643e4ed60342817b 289 Pfam PF03466 LysR substrate binding domain 89 287 6.7E-48 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0754 f089b0279d43bc6d643e4ed60342817b 289 Gene3D G3DSA:3.40.190.10 91 283 9.4E-62 T 14-10-2018 TMO_c0754 f089b0279d43bc6d643e4ed60342817b 289 SUPERFAMILY SSF53850 90 288 3.26E-46 T 14-10-2018 TMO_c0754 f089b0279d43bc6d643e4ed60342817b 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 9.7E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0754 f089b0279d43bc6d643e4ed60342817b 289 SUPERFAMILY SSF46785 3 102 1.11E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 SUPERFAMILY SSF52172 12 142 2.42E-19 T 14-10-2018 IPR011006 CheY-like superfamily TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 SMART SM00421 174 231 4.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 SMART SM00448 8 131 7.1E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 SUPERFAMILY SSF46894 169 237 1.97E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 Gene3D G3DSA:3.40.50.2300 6 119 1.9E-11 T 14-10-2018 TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 229 1.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 Pfam PF00072 Response regulator receiver domain 12 130 5.0E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 Gene3D G3DSA:1.10.10.10 120 237 2.0E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 191 4.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 219 4.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 207 4.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_a0535 66d6276e6b814b45e9945496bb8d4770 237 ProSitePatterns PS00622 LuxR-type HTH domain signature. 191 218 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_0094 86b96f545cf9bc6a0fd989401c767122 119 Pfam PF00355 Rieske [2Fe-2S] domain 10 96 1.0E-10 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_0094 86b96f545cf9bc6a0fd989401c767122 119 Gene3D G3DSA:2.102.10.10 14 117 1.6E-15 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_0094 86b96f545cf9bc6a0fd989401c767122 119 SUPERFAMILY SSF50022 9 113 5.37E-24 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_0027 b79f0045edc4d7c323cd499ee003fe21 399 SUPERFAMILY SSF53383 4 386 2.82E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_0027 b79f0045edc4d7c323cd499ee003fe21 399 Pfam PF00202 Aminotransferase class-III 14 384 2.9E-116 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_0027 b79f0045edc4d7c323cd499ee003fe21 399 PIRSF PIRSF000521 7 147 1.1E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_0027 b79f0045edc4d7c323cd499ee003fe21 399 PIRSF PIRSF000521 162 388 1.1E-40 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_0027 b79f0045edc4d7c323cd499ee003fe21 399 Gene3D G3DSA:3.90.1150.10 14 379 3.4E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_0027 b79f0045edc4d7c323cd499ee003fe21 399 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 385 4.7E-140 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 TMO_0027 b79f0045edc4d7c323cd499ee003fe21 399 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 4 388 67.477 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 TMO_0027 b79f0045edc4d7c323cd499ee003fe21 399 Gene3D G3DSA:3.40.640.10 48 293 3.4E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0027 b79f0045edc4d7c323cd499ee003fe21 399 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_2652 2f934fd13c2e2a9d0d230b96c822cf04 801 Pfam PF01568 Molydopterin dinucleotide binding domain 636 759 1.7E-26 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TMO_2652 2f934fd13c2e2a9d0d230b96c822cf04 801 Gene3D G3DSA:3.40.50.740 62 531 3.1E-148 T 14-10-2018 TMO_2652 2f934fd13c2e2a9d0d230b96c822cf04 801 Gene3D G3DSA:2.40.40.20 612 772 2.9E-44 T 14-10-2018 TMO_2652 2f934fd13c2e2a9d0d230b96c822cf04 801 Gene3D G3DSA:3.40.228.10 158 605 3.1E-148 T 14-10-2018 TMO_2652 2f934fd13c2e2a9d0d230b96c822cf04 801 Pfam PF00384 Molybdopterin oxidoreductase 62 522 1.5E-50 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2652 2f934fd13c2e2a9d0d230b96c822cf04 801 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 675 702 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TMO_2652 2f934fd13c2e2a9d0d230b96c822cf04 801 SUPERFAMILY SSF50692 630 768 3.16E-39 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TMO_2652 2f934fd13c2e2a9d0d230b96c822cf04 801 Gene3D G3DSA:3.90.55.10 61 568 3.1E-148 T 14-10-2018 TMO_2652 2f934fd13c2e2a9d0d230b96c822cf04 801 SUPERFAMILY SSF53706 57 638 3.66E-121 T 14-10-2018 TMO_2501 a84f6381fd694cfbebc153b56d87d29e 619 Pfam PF00583 Acetyltransferase (GNAT) family 168 272 3.5E-9 T 14-10-2018 IPR000182 GNAT domain TMO_2501 a84f6381fd694cfbebc153b56d87d29e 619 SUPERFAMILY SSF55729 96 278 8.37E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2501 a84f6381fd694cfbebc153b56d87d29e 619 TIGRFAM TIGR03103 trio_acet_GNAT: GNAT-family acetyltransferase TIGR03103 63 606 8.1E-263 T 14-10-2018 IPR017534 GNAT-acetyltransferase TMO_2501 a84f6381fd694cfbebc153b56d87d29e 619 SUPERFAMILY SSF56059 357 602 2.3E-31 T 14-10-2018 TMO_2501 a84f6381fd694cfbebc153b56d87d29e 619 Pfam PF08443 RimK-like ATP-grasp domain 356 458 2.8E-7 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 TMO_2501 a84f6381fd694cfbebc153b56d87d29e 619 Gene3D G3DSA:3.30.470.20 440 602 1.8E-12 T 14-10-2018 TMO_2501 a84f6381fd694cfbebc153b56d87d29e 619 Gene3D G3DSA:3.40.630.30 31 286 1.9E-20 T 14-10-2018 TMO_2501 a84f6381fd694cfbebc153b56d87d29e 619 Gene3D G3DSA:3.30.1490.20 357 439 7.2E-11 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_0739 239ccb5403b5fbcd7609198a0d8a9dfd 344 Pfam PF16884 N-terminal domain of oxidoreductase 9 111 4.8E-33 T 14-10-2018 TMO_0739 239ccb5403b5fbcd7609198a0d8a9dfd 344 SUPERFAMILY SSF50129 293 342 6.83E-5 T 14-10-2018 IPR011032 GroES-like superfamily TMO_0739 239ccb5403b5fbcd7609198a0d8a9dfd 344 Gene3D G3DSA:3.40.50.720 135 312 5.5E-115 T 14-10-2018 TMO_0739 239ccb5403b5fbcd7609198a0d8a9dfd 344 Gene3D G3DSA:3.90.180.10 14 341 5.5E-115 T 14-10-2018 TMO_0739 239ccb5403b5fbcd7609198a0d8a9dfd 344 SUPERFAMILY SSF51735 133 308 9.03E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0739 239ccb5403b5fbcd7609198a0d8a9dfd 344 SMART SM00829 21 341 4.7E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_0739 239ccb5403b5fbcd7609198a0d8a9dfd 344 Pfam PF00107 Zinc-binding dehydrogenase 167 260 2.1E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_0739 239ccb5403b5fbcd7609198a0d8a9dfd 344 SUPERFAMILY SSF50129 7 150 1.0E-34 T 14-10-2018 IPR011032 GroES-like superfamily TMO_1592 5522054f65374929887ad4c2c068e663 200 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 6 197 1.7E-70 T 14-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_1592 5522054f65374929887ad4c2c068e663 200 Pfam PF00156 Phosphoribosyl transferase domain 51 167 2.1E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TMO_1592 5522054f65374929887ad4c2c068e663 200 SUPERFAMILY SSF53271 4 194 1.85E-34 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like TMO_1592 5522054f65374929887ad4c2c068e663 200 Gene3D G3DSA:3.40.50.2020 5 199 1.9E-51 T 14-10-2018 TMO_1592 5522054f65374929887ad4c2c068e663 200 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 200 26.065 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 SUPERFAMILY SSF53633 21 271 5.89E-63 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 Hamap MF_00456 Glutamate 5-kinase [proB]. 21 275 35.847 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 Pfam PF01472 PUA domain 293 366 1.4E-20 T 14-10-2018 IPR002478 PUA domain GO:0003723 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 TIGRFAM TIGR01027 proB: glutamate 5-kinase 21 382 9.4E-119 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 SMART SM00359 293 375 1.3E-18 T 14-10-2018 IPR002478 PUA domain GO:0003723 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 ProSitePatterns PS00902 Glutamate 5-kinase signature. 224 241 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 PRINTS PR00474 Glutamate 5-kinase family signature 226 246 9.7E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 9.7E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 PRINTS PR00474 Glutamate 5-kinase family signature 93 121 9.7E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 PRINTS PR00474 Glutamate 5-kinase family signature 165 192 9.7E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 PRINTS PR00474 Glutamate 5-kinase family signature 133 154 9.7E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 Gene3D G3DSA:2.30.130.10 282 382 9.4E-32 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 Gene3D G3DSA:3.40.1160.10 13 280 8.3E-80 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 SUPERFAMILY SSF88697 292 382 1.71E-24 T 14-10-2018 IPR015947 PUA-like superfamily TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 Pfam PF00696 Amino acid kinase family 21 250 7.5E-40 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TMO_2968 fbc298f6a4644e7bdce6f17e2a8c234b 401 PIRSF PIRSF000729 17 383 9.6E-120 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 TMO_0002 78f2f76266b2c6d30545c5d07b4857dc 373 Gene3D G3DSA:3.70.10.10 140 371 9.3E-119 T 14-10-2018 TMO_0002 78f2f76266b2c6d30545c5d07b4857dc 373 PIRSF PIRSF000804 1 373 3.6E-118 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TMO_0002 78f2f76266b2c6d30545c5d07b4857dc 373 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 121 2.3E-29 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TMO_0002 78f2f76266b2c6d30545c5d07b4857dc 373 Gene3D G3DSA:3.10.150.10 1 249 9.3E-119 T 14-10-2018 TMO_0002 78f2f76266b2c6d30545c5d07b4857dc 373 SUPERFAMILY SSF55979 1 121 2.3E-24 T 14-10-2018 TMO_0002 78f2f76266b2c6d30545c5d07b4857dc 373 SUPERFAMILY SSF55979 252 373 3.4E-34 T 14-10-2018 TMO_0002 78f2f76266b2c6d30545c5d07b4857dc 373 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 250 3.7E-33 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 TMO_0002 78f2f76266b2c6d30545c5d07b4857dc 373 SMART SM00480 17 369 8.4E-125 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TMO_0002 78f2f76266b2c6d30545c5d07b4857dc 373 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 253 372 1.7E-32 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TMO_0002 78f2f76266b2c6d30545c5d07b4857dc 373 SUPERFAMILY SSF55979 129 251 9.42E-27 T 14-10-2018 TMO_0002 78f2f76266b2c6d30545c5d07b4857dc 373 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 372 1.3E-87 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 SUPERFAMILY SSF47226 760 841 1.13E-14 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 Gene3D G3DSA:3.30.565.10 411 584 2.7E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 Gene3D G3DSA:1.20.120.160 756 862 4.0E-14 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 Gene3D G3DSA:3.30.450.20 197 322 1.2E-6 T 14-10-2018 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 SUPERFAMILY SSF52172 617 738 1.28E-35 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 Pfam PF01627 Hpt domain 783 858 3.0E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 SMART SM00387 459 583 5.1E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 460 580 1.7E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 SMART SM00388 347 412 6.9E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 SUPERFAMILY SSF55785 195 308 9.57E-9 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 Pfam PF00072 Response regulator receiver domain 622 733 1.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 Pfam PF00512 His Kinase A (phospho-acceptor) domain 348 412 5.2E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 Gene3D G3DSA:1.10.287.130 324 410 3.4E-26 T 14-10-2018 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 Gene3D G3DSA:3.40.50.2300 614 740 2.9E-36 T 14-10-2018 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 SUPERFAMILY SSF55874 401 581 1.3E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 Pfam PF07694 5TMR of 5TMR-LYT 39 188 4.2E-14 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 580 5.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 561 5.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 5.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 SUPERFAMILY SSF47384 332 413 2.55E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_1915 1b42cd4b3548298f5184fbdc0923d0aa 863 SMART SM00448 619 733 6.4E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0766 8a07e25ac9743dd983f2463f7b52cc29 601 Gene3D G3DSA:3.40.50.12780 330 464 2.9E-34 T 14-10-2018 TMO_c0766 8a07e25ac9743dd983f2463f7b52cc29 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0766 8a07e25ac9743dd983f2463f7b52cc29 601 SUPERFAMILY SSF56801 7 600 1.44E-115 T 14-10-2018 TMO_c0766 8a07e25ac9743dd983f2463f7b52cc29 601 Gene3D G3DSA:3.30.300.30 466 596 1.7E-5 T 14-10-2018 TMO_c0766 8a07e25ac9743dd983f2463f7b52cc29 601 Gene3D G3DSA:3.40.50.12780 4 326 3.6E-52 T 14-10-2018 TMO_c0766 8a07e25ac9743dd983f2463f7b52cc29 601 Pfam PF00501 AMP-binding enzyme 15 471 2.7E-90 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0807 3f99b309ab7f5e2aca6feda4d233ffed 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 218 1.2E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_c0807 3f99b309ab7f5e2aca6feda4d233ffed 387 SUPERFAMILY SSF56645 8 243 2.09E-65 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_c0807 3f99b309ab7f5e2aca6feda4d233ffed 387 Gene3D G3DSA:2.40.110.10 121 237 2.1E-34 T 14-10-2018 TMO_c0807 3f99b309ab7f5e2aca6feda4d233ffed 387 Gene3D G3DSA:1.10.540.10 4 119 6.1E-25 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_c0807 3f99b309ab7f5e2aca6feda4d233ffed 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 379 4.2E-41 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_c0807 3f99b309ab7f5e2aca6feda4d233ffed 387 Gene3D G3DSA:1.20.140.10 238 384 6.3E-44 T 14-10-2018 TMO_c0807 3f99b309ab7f5e2aca6feda4d233ffed 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_c0807 3f99b309ab7f5e2aca6feda4d233ffed 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 117 6.1E-24 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_c0807 3f99b309ab7f5e2aca6feda4d233ffed 387 SUPERFAMILY SSF47203 233 379 8.38E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_2242 9b61bcbac4e2e76b5c2fed38a3968c72 401 Gene3D G3DSA:1.20.1250.20 2 390 2.7E-24 T 14-10-2018 TMO_2242 9b61bcbac4e2e76b5c2fed38a3968c72 401 Pfam PF07690 Major Facilitator Superfamily 216 396 8.6E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_2242 9b61bcbac4e2e76b5c2fed38a3968c72 401 SUPERFAMILY SSF103473 6 392 1.57E-28 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 SUPERFAMILY SSF52777 73 261 8.0E-36 T 14-10-2018 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 SUPERFAMILY SSF47336 1018 1123 6.41E-18 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Pfam PF00550 Phosphopantetheine attachment site 1024 1090 1.4E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Gene3D G3DSA:3.40.50.12780 508 905 2.7E-90 T 14-10-2018 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 SUPERFAMILY SSF52777 1113 1289 1.45E-51 T 14-10-2018 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Gene3D G3DSA:3.30.559.10 79 433 3.3E-98 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Pfam PF00501 AMP-binding enzyme 526 911 3.3E-62 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Gene3D G3DSA:3.30.300.30 906 1008 6.8E-32 T 14-10-2018 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Pfam PF13193 AMP-binding enzyme C-terminal domain 919 996 3.8E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Gene3D G3DSA:3.30.559.30 1293 1312 1.1E-65 T 14-10-2018 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 ProSitePatterns PS00455 Putative AMP-binding domain signature. 654 665 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 SMART SM00823 Phosphopantetheine attachment site 1023 1094 1.9E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1049 1064 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Gene3D G3DSA:3.30.559.30 250 486 3.3E-98 T 14-10-2018 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Pfam PF00668 Condensation domain 76 502 5.1E-52 T 14-10-2018 IPR001242 Condensation domain TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Pfam PF00668 Condensation domain 1109 1313 5.9E-46 T 14-10-2018 IPR001242 Condensation domain TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Gene3D G3DSA:3.30.559.10 1112 1292 1.1E-65 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Gene3D G3DSA:1.10.10.1830 2 55 2.3E-19 T 14-10-2018 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 SUPERFAMILY SSF56801 483 1035 5.49E-115 T 14-10-2018 TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 Gene3D G3DSA:1.10.1200.10 1009 1095 2.3E-24 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 548 935 7.2E-96 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_c0604 ac0c2902cd5449307cbdfbf3e388551e 1330 SUPERFAMILY SSF52777 249 491 3.67E-44 T 14-10-2018 TMO_2263 9e22af0e1760cf510ef0a0d71d8bd99b 117 Gene3D G3DSA:3.40.30.10 11 106 3.1E-34 T 14-10-2018 TMO_2263 9e22af0e1760cf510ef0a0d71d8bd99b 117 Pfam PF00462 Glutaredoxin 21 85 3.0E-20 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TMO_2263 9e22af0e1760cf510ef0a0d71d8bd99b 117 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 10 105 1.7E-44 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related TMO_2263 9e22af0e1760cf510ef0a0d71d8bd99b 117 SUPERFAMILY SSF52833 8 108 9.72E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_2263 9e22af0e1760cf510ef0a0d71d8bd99b 117 PIRSF PIRSF005894 2 112 6.2E-46 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 TMO_b0386 fa3c397327e66bfe6bb226aee024a0a1 249 PIRSF PIRSF015736 2 249 1.1E-48 T 14-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase TMO_b0386 fa3c397327e66bfe6bb226aee024a0a1 249 Gene3D G3DSA:3.40.50.12500 8 249 2.4E-57 T 14-10-2018 TMO_c0453 1ae599790c5221b85a0dd31e70216a3f 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 325 1.7E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_c0453 1ae599790c5221b85a0dd31e70216a3f 336 Gene3D G3DSA:3.40.50.300 3 334 2.6E-94 T 14-10-2018 TMO_c0453 1ae599790c5221b85a0dd31e70216a3f 336 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0453 1ae599790c5221b85a0dd31e70216a3f 336 SMART SM00382 34 233 2.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0453 1ae599790c5221b85a0dd31e70216a3f 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 306 1.6E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_c0453 1ae599790c5221b85a0dd31e70216a3f 336 Pfam PF00005 ABC transporter 25 183 1.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0453 1ae599790c5221b85a0dd31e70216a3f 336 SUPERFAMILY SSF52540 5 254 1.49E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0420 ddd1f07084edd4db90e4717403517480 847 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 177 250 2.4E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like TMO_0420 ddd1f07084edd4db90e4717403517480 847 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 182 189 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site TMO_0420 ddd1f07084edd4db90e4717403517480 847 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 534 817 2.2E-102 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TMO_0420 ddd1f07084edd4db90e4717403517480 847 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 724 739 1.4E-20 T 14-10-2018 TMO_0420 ddd1f07084edd4db90e4717403517480 847 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 741 756 1.4E-20 T 14-10-2018 TMO_0420 ddd1f07084edd4db90e4717403517480 847 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 777 789 1.4E-20 T 14-10-2018 TMO_0420 ddd1f07084edd4db90e4717403517480 847 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 575 594 1.4E-20 T 14-10-2018 TMO_0420 ddd1f07084edd4db90e4717403517480 847 SUPERFAMILY SSF47831 323 420 1.44E-21 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TMO_0420 ddd1f07084edd4db90e4717403517480 847 Gene3D G3DSA:3.50.30.10 288 515 1.4E-59 T 14-10-2018 TMO_0420 ddd1f07084edd4db90e4717403517480 847 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 20 154 1.9E-28 T 14-10-2018 IPR002178 PTS EIIA type-2 domain TMO_0420 ddd1f07084edd4db90e4717403517480 847 SUPERFAMILY SSF55594 174 251 1.57E-20 T 14-10-2018 IPR035895 HPr-like superfamily TMO_0420 ddd1f07084edd4db90e4717403517480 847 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 61 77 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain TMO_0420 ddd1f07084edd4db90e4717403517480 847 Gene3D G3DSA:3.40.930.10 15 156 6.6E-32 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TMO_0420 ddd1f07084edd4db90e4717403517480 847 Pfam PF05524 PEP-utilising enzyme, N-terminal 288 406 5.3E-18 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TMO_0420 ddd1f07084edd4db90e4717403517480 847 Gene3D G3DSA:3.30.1340.10 174 255 4.0E-22 T 14-10-2018 IPR035895 HPr-like superfamily TMO_0420 ddd1f07084edd4db90e4717403517480 847 SUPERFAMILY SSF55804 18 154 2.35E-32 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TMO_0420 ddd1f07084edd4db90e4717403517480 847 SUPERFAMILY SSF51621 535 818 6.54E-99 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_0420 ddd1f07084edd4db90e4717403517480 847 PRINTS PR00107 Phosphocarrier protein signature 182 198 1.3E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like TMO_0420 ddd1f07084edd4db90e4717403517480 847 PRINTS PR00107 Phosphocarrier protein signature 222 239 1.3E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like TMO_0420 ddd1f07084edd4db90e4717403517480 847 PRINTS PR00107 Phosphocarrier protein signature 207 222 1.3E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like TMO_0420 ddd1f07084edd4db90e4717403517480 847 Pfam PF00381 PTS HPr component phosphorylation site 176 250 4.4E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like TMO_0420 ddd1f07084edd4db90e4717403517480 847 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 466 477 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TMO_0420 ddd1f07084edd4db90e4717403517480 847 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 287 841 1.7E-134 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 TMO_0420 ddd1f07084edd4db90e4717403517480 847 SUPERFAMILY SSF52009 406 527 1.44E-27 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TMO_0420 ddd1f07084edd4db90e4717403517480 847 Gene3D G3DSA:1.10.274.10 305 427 1.4E-59 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TMO_0420 ddd1f07084edd4db90e4717403517480 847 Pfam PF00391 PEP-utilising enzyme, mobile domain 437 507 2.0E-19 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_0420 ddd1f07084edd4db90e4717403517480 847 Gene3D G3DSA:3.20.20.60 516 845 2.3E-110 T 14-10-2018 TMO_2643 3f386c2557418c4260aaf6115c6ca131 239 Gene3D G3DSA:3.40.50.790 68 159 3.9E-81 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich TMO_2643 3f386c2557418c4260aaf6115c6ca131 239 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2643 3f386c2557418c4260aaf6115c6ca131 239 SUPERFAMILY SSF56808 6 225 1.12E-82 T 14-10-2018 IPR023674 Ribosomal protein L1-like TMO_2643 3f386c2557418c4260aaf6115c6ca131 239 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 228 1.1E-100 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TMO_2643 3f386c2557418c4260aaf6115c6ca131 239 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 229 43.42 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TMO_2643 3f386c2557418c4260aaf6115c6ca131 239 Gene3D G3DSA:3.30.190.20 21 225 3.9E-81 T 14-10-2018 TMO_2643 3f386c2557418c4260aaf6115c6ca131 239 PIRSF PIRSF002155 1 227 3.3E-78 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2643 3f386c2557418c4260aaf6115c6ca131 239 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 1.1E-51 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 134 144 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.30.390.30 437 562 9.0E-47 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 101 419 1.5E-65 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.50.50.60 246 362 3.1E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 438 546 1.5E-28 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF51905 101 458 3.81E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.50.50.60 103 420 3.1E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 PIRSF PIRSF000350 2 562 2.3E-265 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 111 129 1.5E-88 T 14-10-2018 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 238 255 1.5E-88 T 14-10-2018 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 470 490 1.5E-88 T 14-10-2018 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 16 26 1.5E-88 T 14-10-2018 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 535 554 1.5E-88 T 14-10-2018 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 273 290 1.5E-88 T 14-10-2018 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 293 308 1.5E-88 T 14-10-2018 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 146 165 1.5E-88 T 14-10-2018 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 Pfam PF00403 Heavy-metal-associated domain 6 65 1.8E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 TIGRFAM TIGR02053 MerA: mercury(II) reductase 101 562 9.7E-188 T 14-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.30.70.100 5 72 3.3E-18 T 14-10-2018 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF55424 437 560 3.44E-33 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_c0073 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF55008 5 73 6.28E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 SUPERFAMILY SSF64484 11 1361 0.0 T 14-10-2018 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF10385 RNA polymerase beta subunit external 1 domain 599 664 2.9E-25 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1082 1094 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF04565 RNA polymerase Rpb2, domain 3 521 589 3.5E-32 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF00562 RNA polymerase Rpb2, domain 6 726 1282 6.3E-165 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:3.90.1100.10 451 635 6.1E-72 T 14-10-2018 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1361 12.464 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:3.90.1800.10 1271 1324 6.8E-11 T 14-10-2018 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:3.90.1100.10 652 721 2.2E-20 T 14-10-2018 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:3.90.1100.10 18 176 7.9E-58 T 14-10-2018 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF04560 RNA polymerase Rpb2, domain 7 1285 1359 3.1E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:2.40.270.10 1050 1261 3.8E-84 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1358 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF04563 RNA polymerase beta subunit 27 505 8.1E-31 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:3.90.1110.10 323 450 2.4E-34 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 229 1.1E-6 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 365 462 1.6E-19 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:2.40.50.100 722 798 7.4E-31 T 14-10-2018 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:2.40.50.150 839 959 3.0E-45 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2639 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:2.40.270.10 799 838 1.3E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_0065 a348f6b2c7e6dc96a5d443270456b951 78 Pfam PF13560 Helix-turn-helix domain 7 59 7.2E-12 T 14-10-2018 TMO_0065 a348f6b2c7e6dc96a5d443270456b951 78 SUPERFAMILY SSF47413 5 53 1.08E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0065 a348f6b2c7e6dc96a5d443270456b951 78 Gene3D G3DSA:1.10.260.40 2 65 1.2E-12 T 14-10-2018 TMO_0065 a348f6b2c7e6dc96a5d443270456b951 78 SMART SM00530 4 59 1.1E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_2178 bf227a08604f12b4e5259de9b4f89ebf 236 Gene3D G3DSA:3.40.30.10 1 71 2.7E-10 T 14-10-2018 TMO_2178 bf227a08604f12b4e5259de9b4f89ebf 236 SUPERFAMILY SSF52833 7 69 2.36E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_2178 bf227a08604f12b4e5259de9b4f89ebf 236 Pfam PF07291 Methylamine utilisation protein MauE 110 228 5.9E-5 T 14-10-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 TMO_2178 bf227a08604f12b4e5259de9b4f89ebf 236 Pfam PF00462 Glutaredoxin 8 58 8.0E-7 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TMO_2055 4afb1c5c745c8f4891b1304b2875ea42 348 SUPERFAMILY SSF55811 28 145 5.68E-12 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TMO_2055 4afb1c5c745c8f4891b1304b2875ea42 348 Gene3D G3DSA:1.10.10.10 264 338 6.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2055 4afb1c5c745c8f4891b1304b2875ea42 348 PIRSF PIRSF019423 12 348 8.8E-125 T 14-10-2018 IPR011213 Nicotinic acid mononucleotide biosynthesis protein TMO_2055 4afb1c5c745c8f4891b1304b2875ea42 348 SUPERFAMILY SSF46785 267 336 1.2E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0039 eb565cd4ffb5b8502afc6ed6bb82ad3c 317 SUPERFAMILY SSF53474 58 297 1.31E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0039 eb565cd4ffb5b8502afc6ed6bb82ad3c 317 Gene3D G3DSA:3.40.50.1820 55 315 9.4E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2949 7d5691bcda4a18034a1f590ac0ce78de 557 Hamap MF_00577 Urocanate hydratase [hutU]. 5 555 50.584 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2949 7d5691bcda4a18034a1f590ac0ce78de 557 Gene3D G3DSA:3.40.1770.10 18 541 6.2E-256 T 14-10-2018 TMO_2949 7d5691bcda4a18034a1f590ac0ce78de 557 Pfam PF01175 Urocanase Rossmann-like domain 140 348 4.8E-84 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2949 7d5691bcda4a18034a1f590ac0ce78de 557 PIRSF PIRSF001423 2 557 4.4E-292 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2949 7d5691bcda4a18034a1f590ac0ce78de 557 Gene3D G3DSA:3.40.50.10730 141 348 6.2E-256 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2949 7d5691bcda4a18034a1f590ac0ce78de 557 SUPERFAMILY SSF111326 7 553 3.92E-260 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2949 7d5691bcda4a18034a1f590ac0ce78de 557 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 552 2.3E-292 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2949 7d5691bcda4a18034a1f590ac0ce78de 557 Pfam PF17392 Urocanase C-terminal domain 351 545 7.9E-93 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2949 7d5691bcda4a18034a1f590ac0ce78de 557 ProSitePatterns PS01233 Urocanase signature. 441 456 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2949 7d5691bcda4a18034a1f590ac0ce78de 557 Pfam PF17391 Urocanase N-terminal domain 11 137 1.4E-59 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 4.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 249 1.4E-63 T 14-10-2018 TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 Gene3D G3DSA:3.40.50.720 1 251 1.8E-77 T 14-10-2018 TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_a0508 42ca797dcec9ab5031c8985d35b7fe0b 251 SUPERFAMILY SSF51735 6 250 3.29E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3270 ebd678d17b0bd8916fa93ce50633b69a 288 SUPERFAMILY SSF53613 3 273 2.81E-59 T 14-10-2018 IPR029056 Ribokinase-like TMO_3270 ebd678d17b0bd8916fa93ce50633b69a 288 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 2 276 3.2E-68 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 TMO_3270 ebd678d17b0bd8916fa93ce50633b69a 288 Gene3D G3DSA:3.40.1190.20 1 285 1.1E-77 T 14-10-2018 IPR029056 Ribokinase-like TMO_3270 ebd678d17b0bd8916fa93ce50633b69a 288 Pfam PF08543 Phosphomethylpyrimidine kinase 79 262 2.2E-20 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 TMO_0714 880731af50c5d9088ff416033c8ebe94 341 SUPERFAMILY SSF53448 14 250 4.3E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_0714 880731af50c5d9088ff416033c8ebe94 341 Gene3D G3DSA:3.90.550.10 16 237 1.3E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_0714 880731af50c5d9088ff416033c8ebe94 341 Pfam PF13641 Glycosyltransferase like family 2 23 239 2.9E-8 T 14-10-2018 TMO_c0364 0b2379460c917f2bf50ace4df165784c 430 SUPERFAMILY SSF103473 17 425 6.15E-59 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0364 0b2379460c917f2bf50ace4df165784c 430 Gene3D G3DSA:1.20.1250.20 15 426 1.8E-53 T 14-10-2018 TMO_c0364 0b2379460c917f2bf50ace4df165784c 430 Pfam PF07690 Major Facilitator Superfamily 57 323 6.2E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_2334 3a111b634ba77eb02321ee16a60c7b09 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 238 254 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_2334 3a111b634ba77eb02321ee16a60c7b09 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 209 231 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_2334 3a111b634ba77eb02321ee16a60c7b09 330 SUPERFAMILY SSF52283 8 146 3.02E-27 T 14-10-2018 TMO_2334 3a111b634ba77eb02321ee16a60c7b09 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 298 7.5E-55 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_2334 3a111b634ba77eb02321ee16a60c7b09 330 Gene3D G3DSA:3.40.50.720 11 308 2.9E-98 T 14-10-2018 TMO_2334 3a111b634ba77eb02321ee16a60c7b09 330 Gene3D G3DSA:3.40.50.720 109 294 2.9E-98 T 14-10-2018 TMO_2334 3a111b634ba77eb02321ee16a60c7b09 330 SUPERFAMILY SSF51735 109 299 1.11E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2334 3a111b634ba77eb02321ee16a60c7b09 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 28 328 3.5E-24 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TMO_0522 e11f1237cff2c1456bc9a4bc57971285 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_0522 e11f1237cff2c1456bc9a4bc57971285 387 Gene3D G3DSA:1.10.540.10 3 116 2.3E-26 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_0522 e11f1237cff2c1456bc9a4bc57971285 387 Gene3D G3DSA:1.20.140.10 237 380 4.3E-37 T 14-10-2018 TMO_0522 e11f1237cff2c1456bc9a4bc57971285 387 PIRSF PIRSF016578 230 385 4.3E-5 T 14-10-2018 TMO_0522 e11f1237cff2c1456bc9a4bc57971285 387 PIRSF PIRSF016578 2 195 2.5E-7 T 14-10-2018 TMO_0522 e11f1237cff2c1456bc9a4bc57971285 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 116 3.1E-23 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_0522 e11f1237cff2c1456bc9a4bc57971285 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 219 1.6E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_0522 e11f1237cff2c1456bc9a4bc57971285 387 SUPERFAMILY SSF56645 6 244 1.7E-60 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_0522 e11f1237cff2c1456bc9a4bc57971285 387 SUPERFAMILY SSF47203 230 385 1.11E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_0522 e11f1237cff2c1456bc9a4bc57971285 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 365 2.2E-34 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_0522 e11f1237cff2c1456bc9a4bc57971285 387 Gene3D G3DSA:2.40.110.10 121 236 8.6E-34 T 14-10-2018 TMO_2260 036e81dc37cbe07e0a712f92427c4647 617 SUPERFAMILY SSF56042 198 423 1.64E-55 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TMO_2260 036e81dc37cbe07e0a712f92427c4647 617 Gene3D G3DSA:3.30.1330.10 394 558 1.1E-57 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TMO_2260 036e81dc37cbe07e0a712f92427c4647 617 SUPERFAMILY SSF55326 402 560 5.5E-55 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TMO_2260 036e81dc37cbe07e0a712f92427c4647 617 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 617 294.74 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TMO_2260 036e81dc37cbe07e0a712f92427c4647 617 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 17 605 3.5E-271 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TMO_2260 036e81dc37cbe07e0a712f92427c4647 617 Gene3D G3DSA:3.30.1330.10 44 191 2.9E-135 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TMO_2260 036e81dc37cbe07e0a712f92427c4647 617 Gene3D G3DSA:3.90.650.10 28 354 2.9E-135 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TMO_2260 036e81dc37cbe07e0a712f92427c4647 617 Pfam PF02769 AIR synthase related protein, C-terminal domain 202 352 6.3E-33 T 14-10-2018 IPR010918 PurM-like, C-terminal domain TMO_2260 036e81dc37cbe07e0a712f92427c4647 617 SUPERFAMILY SSF55326 12 195 2.69E-51 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TMO_2260 036e81dc37cbe07e0a712f92427c4647 617 Pfam PF00586 AIR synthase related protein, N-terminal domain 86 187 3.5E-24 T 14-10-2018 IPR016188 PurM-like, N-terminal domain TMO_2260 036e81dc37cbe07e0a712f92427c4647 617 Pfam PF00586 AIR synthase related protein, N-terminal domain 438 555 8.2E-25 T 14-10-2018 IPR016188 PurM-like, N-terminal domain TMO_a0497 a949e1e7e65dcaab34535e271e319c33 237 SMART SM00382 29 214 9.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0497 a949e1e7e65dcaab34535e271e319c33 237 SUPERFAMILY SSF52540 3 235 2.72E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0497 a949e1e7e65dcaab34535e271e319c33 237 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0497 a949e1e7e65dcaab34535e271e319c33 237 Pfam PF00005 ABC transporter 22 164 8.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0497 a949e1e7e65dcaab34535e271e319c33 237 Gene3D G3DSA:3.40.50.300 1 237 1.5E-54 T 14-10-2018 TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 SUPERFAMILY SSF51011 597 708 1.65E-14 T 14-10-2018 TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 Gene3D G3DSA:1.10.10.760 1151 1195 3.8E-158 T 14-10-2018 TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 15 103 6.7E-17 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 Gene3D G3DSA:2.60.40.1180 596 708 6.9E-10 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 Pfam PF11941 Domain of unknown function (DUF3459) 1215 1303 2.3E-11 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 Gene3D G3DSA:2.60.40.10 724 817 4.7E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 Pfam PF00128 Alpha amylase, catalytic domain 842 924 8.3E-10 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 Pfam PF00128 Alpha amylase, catalytic domain 199 284 6.6E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 11 706 0.0 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 Gene3D G3DSA:2.60.40.10 5 146 1.0E-48 T 14-10-2018 IPR013783 Immunoglobulin-like fold TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 Gene3D G3DSA:3.20.20.80 821 1223 3.8E-158 T 14-10-2018 TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 SMART SM00642 808 1181 2.1E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 SUPERFAMILY SSF81296 10 157 2.57E-48 T 14-10-2018 IPR014756 Immunoglobulin E-set TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 SUPERFAMILY SSF51445 808 1224 5.76E-100 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 Gene3D G3DSA:3.20.20.80 147 590 4.8E-163 T 14-10-2018 TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 SUPERFAMILY SSF51445 143 583 2.32E-121 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 SUPERFAMILY SSF81296 726 811 5.37E-17 T 14-10-2018 IPR014756 Immunoglobulin E-set TMO_a0212 7584e2bf04129746a4626845b07ed8f6 1309 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 736 1270 1.1E-196 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 TMO_0350 71c7fa324445974b5713a41105255181 327 Gene3D G3DSA:3.20.20.60 1 327 6.3E-118 T 14-10-2018 TMO_0350 71c7fa324445974b5713a41105255181 327 PIRSF PIRSF015582 1 327 4.6E-87 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like TMO_0350 71c7fa324445974b5713a41105255181 327 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 261 6.1E-41 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_0350 71c7fa324445974b5713a41105255181 327 SUPERFAMILY SSF51621 11 270 6.91E-62 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 2.9E-43 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 SUPERFAMILY SSF53738 260 366 7.85E-33 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 Gene3D G3DSA:3.40.120.10 176 363 7.2E-68 T 14-10-2018 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 Gene3D G3DSA:3.40.120.10 259 342 7.2E-68 T 14-10-2018 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 Gene3D G3DSA:3.40.120.10 2 146 2.0E-47 T 14-10-2018 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 2.4E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 6.5E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 6.5E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 6.5E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 Gene3D G3DSA:3.30.310.50 373 448 1.9E-20 T 14-10-2018 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 SUPERFAMILY SSF53738 158 257 7.06E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 365 1.1E-34 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 SUPERFAMILY SSF53738 2 183 1.65E-46 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 444 9.1E-185 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 SUPERFAMILY SSF55957 362 446 2.22E-18 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 442 5.7E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_0913 1c3e4253c891a73a01bc7aafa2152b20 451 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 446 45.988 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 SMART SM01004 9 332 3.2E-229 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 306 325 6.0E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 6.0E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 159 178 6.0E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 251 267 6.0E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 276 291 6.0E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 197 216 6.0E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 329 4.2E-137 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 251 263 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 Gene3D G3DSA:3.20.20.70 4 334 4.9E-140 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 SUPERFAMILY SSF51569 8 333 6.72E-139 T 14-10-2018 TMO_1616 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PIRSF PIRSF001415 3 334 2.4E-144 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TMO_0937 95749879b8607c3056047fade9966775 160 Gene3D G3DSA:3.40.140.10 7 144 1.6E-27 T 14-10-2018 TMO_0937 95749879b8607c3056047fade9966775 160 SUPERFAMILY SSF102712 7 134 6.41E-18 T 14-10-2018 TMO_0937 95749879b8607c3056047fade9966775 160 Pfam PF14464 Prokaryotic homologs of the JAB domain 13 130 1.8E-17 T 14-10-2018 IPR028090 JAB domain, prokaryotic TMO_0937 95749879b8607c3056047fade9966775 160 SMART SM00232 6 133 0.0016 T 14-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 TMO_2774 bb68bf377746a780b1f7c0e3b9decf58 247 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 106 138 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2774 bb68bf377746a780b1f7c0e3b9decf58 247 Gene3D G3DSA:3.40.1010.10 13 140 5.7E-30 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TMO_2774 bb68bf377746a780b1f7c0e3b9decf58 247 Gene3D G3DSA:3.30.950.10 141 245 1.3E-12 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TMO_2774 bb68bf377746a780b1f7c0e3b9decf58 247 PIRSF PIRSF036427 13 247 3.1E-64 T 14-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 TMO_2774 bb68bf377746a780b1f7c0e3b9decf58 247 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 15 241 8.1E-65 T 14-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 TMO_2774 bb68bf377746a780b1f7c0e3b9decf58 247 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 20 34 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2774 bb68bf377746a780b1f7c0e3b9decf58 247 SUPERFAMILY SSF53790 12 243 6.67E-47 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TMO_2774 bb68bf377746a780b1f7c0e3b9decf58 247 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 222 1.6E-47 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TMO_c0438 5cf7a96276a0591b88dda92ec78329e4 298 Gene3D G3DSA:1.10.10.60 184 289 3.1E-27 T 14-10-2018 TMO_c0438 5cf7a96276a0591b88dda92ec78329e4 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_c0438 5cf7a96276a0591b88dda92ec78329e4 298 Pfam PF12833 Helix-turn-helix domain 211 285 7.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0438 5cf7a96276a0591b88dda92ec78329e4 298 SUPERFAMILY SSF46689 188 239 9.86E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0438 5cf7a96276a0591b88dda92ec78329e4 298 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 176 3.1E-41 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal TMO_c0438 5cf7a96276a0591b88dda92ec78329e4 298 SUPERFAMILY SSF46689 241 286 1.63E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0438 5cf7a96276a0591b88dda92ec78329e4 298 SMART SM00342 205 288 7.1E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0728 2dad1b273dac25315c7d473880b068c9 196 Gene3D G3DSA:1.10.1760.20 22 190 4.5E-43 T 14-10-2018 TMO_0728 2dad1b273dac25315c7d473880b068c9 196 Pfam PF02632 BioY family 43 182 7.7E-36 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 TMO_0728 2dad1b273dac25315c7d473880b068c9 196 PIRSF PIRSF016661 15 190 1.6E-39 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 200 4.0E-97 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 Gene3D G3DSA:3.90.226.10 2 207 5.7E-85 T 14-10-2018 TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 1.4E-51 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 1.4E-51 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 1.4E-51 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 1.4E-51 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 1.4E-51 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 SUPERFAMILY SSF52096 19 201 9.64E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 14-10-2018 IPR033135 ClpP, histidine active site TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 43.191 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 14-10-2018 IPR018215 ClpP, Ser active site TMO_1983 ca0535d36bf88c12b9a36612c24b12bf 210 Pfam PF00574 Clp protease 22 201 4.3E-86 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TMO_c0429 2d5419df58e769d95f7eae28f5b4bb03 394 Pfam PF00108 Thiolase, N-terminal domain 5 263 6.0E-66 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_c0429 2d5419df58e769d95f7eae28f5b4bb03 394 SUPERFAMILY SSF53901 1 267 4.26E-72 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0429 2d5419df58e769d95f7eae28f5b4bb03 394 Gene3D G3DSA:3.40.47.10 128 386 1.7E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0429 2d5419df58e769d95f7eae28f5b4bb03 394 PIRSF PIRSF000429 1 394 9.8E-119 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_c0429 2d5419df58e769d95f7eae28f5b4bb03 394 SUPERFAMILY SSF53901 273 393 2.64E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0429 2d5419df58e769d95f7eae28f5b4bb03 394 Gene3D G3DSA:3.40.47.10 4 277 1.7E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0429 2d5419df58e769d95f7eae28f5b4bb03 394 Pfam PF02803 Thiolase, C-terminal domain 272 392 1.6E-42 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_c0429 2d5419df58e769d95f7eae28f5b4bb03 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 392 1.0E-128 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_c0429 2d5419df58e769d95f7eae28f5b4bb03 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Pfam PF00512 His Kinase A (phospho-acceptor) domain 758 823 1.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Gene3D G3DSA:3.30.450.20 613 733 3.3E-20 T 14-10-2018 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SMART SM00388 758 823 2.0E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Gene3D G3DSA:1.10.287.130 734 821 4.8E-28 T 14-10-2018 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SMART SM00086 443 485 0.038 T 14-10-2018 IPR001610 PAC motif TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SMART SM00086 698 738 6.3 T 14-10-2018 IPR001610 PAC motif TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SMART SM00091 372 439 4.7 T 14-10-2018 IPR000014 PAS domain TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SMART SM00091 624 690 8.0E-6 T 14-10-2018 IPR000014 PAS domain TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SMART SM00091 501 572 72.0 T 14-10-2018 IPR000014 PAS domain TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Pfam PF03924 CHASE domain 94 271 2.8E-32 T 14-10-2018 IPR006189 CHASE domain TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Pfam PF08448 PAS fold 524 613 1.1E-6 T 14-10-2018 IPR013656 PAS fold-4 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Pfam PF08448 PAS fold 386 484 2.9E-7 T 14-10-2018 IPR013656 PAS fold-4 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Pfam PF00989 PAS fold 625 679 1.2E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SUPERFAMILY SSF55785 609 736 1.41E-18 T 14-10-2018 IPR035965 PAS domain superfamily TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SUPERFAMILY SSF55785 365 483 1.57E-17 T 14-10-2018 IPR035965 PAS domain superfamily TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SUPERFAMILY SSF52172 1001 1121 3.56E-13 T 14-10-2018 IPR011006 CheY-like superfamily TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Gene3D G3DSA:3.40.50.2300 1001 1128 8.2E-12 T 14-10-2018 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SUPERFAMILY SSF52172 1140 1266 8.68E-38 T 14-10-2018 IPR011006 CheY-like superfamily TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Gene3D G3DSA:3.40.50.2300 1139 1262 6.9E-39 T 14-10-2018 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SUPERFAMILY SSF47226 1278 1389 9.81E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Gene3D G3DSA:1.20.120.160 1278 1390 4.6E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SUPERFAMILY SSF55785 481 604 1.38E-10 T 14-10-2018 IPR035965 PAS domain superfamily TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SMART SM00448 1142 1258 2.8E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SMART SM00448 1003 1116 0.016 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SUPERFAMILY SSF47384 743 824 9.81E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 368 491 2.0E-14 T 14-10-2018 IPR000014 PAS domain TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 620 744 4.1E-12 T 14-10-2018 IPR000014 PAS domain TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Gene3D G3DSA:3.30.450.20 503 611 1.5E-9 T 14-10-2018 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Gene3D G3DSA:3.30.450.20 360 497 1.5E-20 T 14-10-2018 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SMART SM01079 91 274 1.0E-16 T 14-10-2018 IPR006189 CHASE domain TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 939 6.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 970 983 6.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 946 964 6.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 911 925 6.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Gene3D G3DSA:3.30.450.350 95 278 1.3E-7 T 14-10-2018 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Pfam PF00072 Response regulator receiver domain 1145 1258 5.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SUPERFAMILY SSF55874 812 982 4.19E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 870 985 9.6E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 Gene3D G3DSA:3.30.565.10 822 988 1.6E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0129 044146a8c3538b767efc9b2f101c1c85 1397 SMART SM00387 870 986 2.8E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0178 f4551a7e2a2f99e4110ec9f4d349729e 266 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 30 266 4.9E-112 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 TMO_0178 f4551a7e2a2f99e4110ec9f4d349729e 266 SUPERFAMILY SSF52540 30 261 2.2E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0178 f4551a7e2a2f99e4110ec9f4d349729e 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 240 261 2.2E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_0178 f4551a7e2a2f99e4110ec9f4d349729e 266 Gene3D G3DSA:3.40.50.300 29 266 2.0E-66 T 14-10-2018 TMO_0178 f4551a7e2a2f99e4110ec9f4d349729e 266 Pfam PF00005 ABC transporter 45 190 4.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0178 f4551a7e2a2f99e4110ec9f4d349729e 266 SMART SM00382 54 247 5.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0178 f4551a7e2a2f99e4110ec9f4d349729e 266 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0193 96faa45b9ef443a39d4d24c157042ed4 483 Pfam PF02913 FAD linked oxidases, C-terminal domain 241 480 2.8E-65 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TMO_c0193 96faa45b9ef443a39d4d24c157042ed4 483 SUPERFAMILY SSF56176 25 241 1.12E-70 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_c0193 96faa45b9ef443a39d4d24c157042ed4 483 Gene3D G3DSA:3.30.465.40 36 258 1.5E-76 T 14-10-2018 TMO_c0193 96faa45b9ef443a39d4d24c157042ed4 483 SUPERFAMILY SSF55103 245 482 5.4E-71 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TMO_c0193 96faa45b9ef443a39d4d24c157042ed4 483 Pfam PF01565 FAD binding domain 67 203 5.9E-41 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TMO_c0193 96faa45b9ef443a39d4d24c157042ed4 483 Gene3D G3DSA:3.30.70.2740 360 441 3.0E-11 T 14-10-2018 TMO_c0193 96faa45b9ef443a39d4d24c157042ed4 483 Gene3D G3DSA:1.10.45.10 442 481 6.4E-14 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 TMO_2541 a71ad40d7b421071f484525f1274ad07 454 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 385 419 5.4E-8 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_2541 a71ad40d7b421071f484525f1274ad07 454 SUPERFAMILY SSF53448 4 313 4.28E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_2541 a71ad40d7b421071f484525f1274ad07 454 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 393 421 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TMO_2541 a71ad40d7b421071f484525f1274ad07 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 442 38.875 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 TMO_2541 a71ad40d7b421071f484525f1274ad07 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 440 3.2E-153 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 TMO_2541 a71ad40d7b421071f484525f1274ad07 454 SUPERFAMILY SSF51161 258 430 3.38E-47 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_2541 a71ad40d7b421071f484525f1274ad07 454 Gene3D G3DSA:2.160.10.10 257 430 4.8E-49 T 14-10-2018 TMO_2541 a71ad40d7b421071f484525f1274ad07 454 Gene3D G3DSA:3.90.550.10 1 256 6.3E-68 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_2541 a71ad40d7b421071f484525f1274ad07 454 Pfam PF12804 MobA-like NTP transferase domain 6 138 4.8E-19 T 14-10-2018 IPR025877 MobA-like NTP transferase TMO_2541 a71ad40d7b421071f484525f1274ad07 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 272 306 1.1E-7 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_2541 a71ad40d7b421071f484525f1274ad07 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 312 342 4.7E-5 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_0222 2440233aa482eed07dbc19a394640bf9 404 Gene3D G3DSA:1.20.1720.10 23 400 1.2E-85 T 14-10-2018 TMO_0222 2440233aa482eed07dbc19a394640bf9 404 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 93 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TMO_0222 2440233aa482eed07dbc19a394640bf9 404 Pfam PF07690 Major Facilitator Superfamily 30 368 3.0E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0222 2440233aa482eed07dbc19a394640bf9 404 SUPERFAMILY SSF103473 13 398 7.06E-55 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0222 2440233aa482eed07dbc19a394640bf9 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 24 387 8.5E-69 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 TMO_2942 3df11e9ea558935273c6f70803680646 217 Gene3D G3DSA:1.10.357.10 21 207 2.0E-38 T 14-10-2018 TMO_2942 3df11e9ea558935273c6f70803680646 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 8.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2942 3df11e9ea558935273c6f70803680646 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 8.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2942 3df11e9ea558935273c6f70803680646 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 69 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_2942 3df11e9ea558935273c6f70803680646 217 SUPERFAMILY SSF46689 13 87 9.48E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2942 3df11e9ea558935273c6f70803680646 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 5.0E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 471 1.7E-160 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 SMART SM01240 5 471 0.0 T 14-10-2018 TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 PIRSF PIRSF000130 1 485 7.6E-206 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 292 304 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 6 453 2.6E-193 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 Pfam PF00571 CBS domain 94 139 6.4E-11 T 14-10-2018 IPR000644 CBS domain TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 Pfam PF00571 CBS domain 147 199 1.3E-5 T 14-10-2018 IPR000644 CBS domain TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 SUPERFAMILY SSF54631 93 201 1.1E-30 T 14-10-2018 TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 6 484 84.945 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 Gene3D G3DSA:3.20.20.70 1 484 1.7E-214 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 SMART SM00116 155 203 9.4E-6 T 14-10-2018 IPR000644 CBS domain TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 SMART SM00116 94 142 1.3E-11 T 14-10-2018 IPR000644 CBS domain TMO_1438 da2961a6efa4f6ad3e133624d6c58839 485 SUPERFAMILY SSF51412 2 475 1.1E-122 T 14-10-2018 TMO_1715 7965e02f68ba813ca02dbd5bf1edcc3b 465 Pfam PF02817 e3 binding domain 139 174 3.6E-16 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 TMO_1715 7965e02f68ba813ca02dbd5bf1edcc3b 465 Gene3D G3DSA:3.30.559.10 224 462 3.8E-94 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_1715 7965e02f68ba813ca02dbd5bf1edcc3b 465 Gene3D G3DSA:2.40.50.100 1 102 1.4E-33 T 14-10-2018 TMO_1715 7965e02f68ba813ca02dbd5bf1edcc3b 465 SUPERFAMILY SSF52777 239 465 2.8E-83 T 14-10-2018 TMO_1715 7965e02f68ba813ca02dbd5bf1edcc3b 465 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 241 465 6.7E-85 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 TMO_1715 7965e02f68ba813ca02dbd5bf1edcc3b 465 Gene3D G3DSA:4.10.320.10 126 181 1.1E-18 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 TMO_1715 7965e02f68ba813ca02dbd5bf1edcc3b 465 SUPERFAMILY SSF47005 134 178 3.66E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 TMO_1715 7965e02f68ba813ca02dbd5bf1edcc3b 465 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TMO_1715 7965e02f68ba813ca02dbd5bf1edcc3b 465 SUPERFAMILY SSF51230 1 96 2.49E-29 T 14-10-2018 IPR011053 Single hybrid motif TMO_1715 7965e02f68ba813ca02dbd5bf1edcc3b 465 Pfam PF00364 Biotin-requiring enzyme 4 77 8.4E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_1715 7965e02f68ba813ca02dbd5bf1edcc3b 465 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 5 465 5.9E-164 T 14-10-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 TMO_3234 478d6b1652df7a3d945a6fed2f362327 404 SUPERFAMILY SSF53686 12 398 3.14E-148 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_3234 478d6b1652df7a3d945a6fed2f362327 404 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 90 104 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TMO_3234 478d6b1652df7a3d945a6fed2f362327 404 PIRSF PIRSF001413 5 404 9.8E-159 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TMO_3234 478d6b1652df7a3d945a6fed2f362327 404 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 11 400 52.15 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TMO_3234 478d6b1652df7a3d945a6fed2f362327 404 Gene3D G3DSA:3.40.50.1100 63 393 2.1E-185 T 14-10-2018 TMO_3234 478d6b1652df7a3d945a6fed2f362327 404 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 62 387 6.1E-45 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_3234 478d6b1652df7a3d945a6fed2f362327 404 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 16 399 1.2E-192 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TMO_3234 478d6b1652df7a3d945a6fed2f362327 404 Gene3D G3DSA:3.40.50.1100 19 215 2.1E-185 T 14-10-2018 TMO_0379 52360114c8ef887f16272978de2e9440 414 Gene3D G3DSA:3.40.50.800 321 413 1.2E-20 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily TMO_0379 52360114c8ef887f16272978de2e9440 414 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 402 9.4E-137 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TMO_0379 52360114c8ef887f16272978de2e9440 414 PIRSF PIRSF001549 1 413 4.0E-110 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 TMO_0379 52360114c8ef887f16272978de2e9440 414 SUPERFAMILY SSF55681 4 315 6.32E-92 T 14-10-2018 TMO_0379 52360114c8ef887f16272978de2e9440 414 Pfam PF03129 Anticodon binding domain 325 412 5.4E-14 T 14-10-2018 IPR004154 Anticodon-binding TMO_0379 52360114c8ef887f16272978de2e9440 414 Gene3D G3DSA:3.30.930.10 1 319 2.4E-107 T 14-10-2018 TMO_0379 52360114c8ef887f16272978de2e9440 414 Pfam PF13393 Histidyl-tRNA synthetase 9 311 7.5E-42 T 14-10-2018 TMO_0379 52360114c8ef887f16272978de2e9440 414 SUPERFAMILY SSF52954 324 411 8.34E-21 T 14-10-2018 TMO_0379 52360114c8ef887f16272978de2e9440 414 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 412 31.062 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 Pfam PF03129 Anticodon binding domain 509 604 5.8E-21 T 14-10-2018 IPR004154 Anticodon-binding TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 Gene3D G3DSA:3.40.50.800 501 615 1.7E-34 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 Gene3D G3DSA:3.30.54.20 71 149 3.1E-55 T 14-10-2018 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 PRINTS PR01047 Threonyl-tRNA synthetase signature 475 488 1.2E-38 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 PRINTS PR01047 Threonyl-tRNA synthetase signature 293 321 1.2E-38 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 PRINTS PR01047 Threonyl-tRNA synthetase signature 326 349 1.2E-38 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 PRINTS PR01047 Threonyl-tRNA synthetase signature 432 460 1.2E-38 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 PRINTS PR01047 Threonyl-tRNA synthetase signature 502 514 1.2E-38 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 Gene3D G3DSA:3.30.980.10 11 183 3.1E-55 T 14-10-2018 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 SUPERFAMILY SSF55186 11 202 2.35E-49 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 SUPERFAMILY SSF52954 495 607 2.72E-30 T 14-10-2018 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 SMART SM00863 132 181 1.3E-22 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 Gene3D G3DSA:3.30.930.10 187 500 4.1E-101 T 14-10-2018 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 287 497 5.2E-32 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 7 609 30.658 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 132 181 3.7E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 13 606 8.1E-183 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0780 f019ef64d6d7f20eca9b9c3401882fd1 627 SUPERFAMILY SSF55681 205 494 8.6E-81 T 14-10-2018 TMO_2909 c5180a41011da1546dd6e8f25047b4b8 274 SUPERFAMILY SSF55920 17 266 1.13E-84 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like TMO_2909 c5180a41011da1546dd6e8f25047b4b8 274 Gene3D G3DSA:3.90.230.10 3 270 5.0E-94 T 14-10-2018 TMO_2909 c5180a41011da1546dd6e8f25047b4b8 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 173 185 1.8E-19 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_2909 c5180a41011da1546dd6e8f25047b4b8 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 103 119 1.8E-19 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_2909 c5180a41011da1546dd6e8f25047b4b8 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 80 93 1.8E-19 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_2909 c5180a41011da1546dd6e8f25047b4b8 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 204 216 1.8E-19 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_2909 c5180a41011da1546dd6e8f25047b4b8 274 Hamap MF_01974 Methionine aminopeptidase [map]. 15 262 36.137 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_2909 c5180a41011da1546dd6e8f25047b4b8 274 Pfam PF00557 Metallopeptidase family M24 25 253 6.7E-49 T 14-10-2018 IPR000994 Peptidase M24 TMO_2909 c5180a41011da1546dd6e8f25047b4b8 274 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 18 261 9.6E-78 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_c0269 0d4baa47f67c3167a699ae07c678885f 587 Pfam PF05199 GMC oxidoreductase 445 571 1.5E-22 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 TMO_c0269 0d4baa47f67c3167a699ae07c678885f 587 Pfam PF00732 GMC oxidoreductase 233 345 1.1E-4 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 TMO_c0269 0d4baa47f67c3167a699ae07c678885f 587 SUPERFAMILY SSF54373 392 502 1.22E-10 T 14-10-2018 TMO_c0269 0d4baa47f67c3167a699ae07c678885f 587 Gene3D G3DSA:3.50.50.60 480 583 1.5E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0269 0d4baa47f67c3167a699ae07c678885f 587 Gene3D G3DSA:3.50.50.60 5 171 3.6E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0269 0d4baa47f67c3167a699ae07c678885f 587 SUPERFAMILY SSF51905 8 580 1.81E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 279 7.9E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 509 536 0.037 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 Gene3D G3DSA:3.40.50.300 280 545 3.3E-85 T 14-10-2018 TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 Gene3D G3DSA:3.40.50.300 9 279 1.5E-85 T 14-10-2018 TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 SUPERFAMILY SSF52540 11 260 1.89E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 SUPERFAMILY SSF52540 281 529 1.57E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 Pfam PF00005 ABC transporter 308 457 2.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 SMART SM00382 40 239 6.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 SMART SM00382 316 507 2.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0273 59fb55d2caa732fb4a587e7021c10d25 551 Pfam PF00005 ABC transporter 32 189 1.4E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0311 b853da67bd41a03e1f7de694ca8a99ea 219 TIGRFAM TIGR03308 phn_thr-fam: phosphonate metabolim protein, transferase hexapeptide repeat family 15 212 3.3E-79 T 14-10-2018 IPR017694 Phosphonate metabolism protein, transferase hexapeptide repeat family TMO_b0311 b853da67bd41a03e1f7de694ca8a99ea 219 Gene3D G3DSA:2.160.10.10 16 215 9.3E-51 T 14-10-2018 TMO_b0311 b853da67bd41a03e1f7de694ca8a99ea 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 151 1.6E-9 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_b0311 b853da67bd41a03e1f7de694ca8a99ea 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 125 153 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TMO_b0311 b853da67bd41a03e1f7de694ca8a99ea 219 SUPERFAMILY SSF51161 45 211 1.8E-42 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_2473 eea3f93af76d3bf8683c67945c66e73b 323 Gene3D G3DSA:3.40.190.10 35 310 6.5E-78 T 14-10-2018 TMO_2473 eea3f93af76d3bf8683c67945c66e73b 323 Gene3D G3DSA:3.40.190.10 117 217 6.5E-78 T 14-10-2018 TMO_2473 eea3f93af76d3bf8683c67945c66e73b 323 Pfam PF09084 NMT1/THI5 like 45 256 4.7E-72 T 14-10-2018 IPR015168 SsuA/THI5-like TMO_2473 eea3f93af76d3bf8683c67945c66e73b 323 SUPERFAMILY SSF53850 37 318 1.9E-54 T 14-10-2018 TMO_0630 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.2E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_0630 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Gene3D G3DSA:1.20.140.10 232 380 5.4E-28 T 14-10-2018 TMO_0630 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Gene3D G3DSA:1.10.540.10 1 118 2.5E-25 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_0630 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 5.6E-13 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_0630 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 360 6.7E-21 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_0630 3d2ba492e00cad0cac1bbdeb2a42e4da 382 SUPERFAMILY SSF56645 1 225 1.18E-46 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_0630 3d2ba492e00cad0cac1bbdeb2a42e4da 382 SUPERFAMILY SSF47203 229 376 2.9E-30 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_0630 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Gene3D G3DSA:2.40.110.10 122 231 8.1E-19 T 14-10-2018 TMO_3435 f0df9af210962bd1e23e73c7c5de85b3 356 SUPERFAMILY SSF53597 135 328 1.31E-52 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TMO_3435 f0df9af210962bd1e23e73c7c5de85b3 356 Gene3D G3DSA:3.40.430.10 132 344 6.5E-59 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TMO_3435 f0df9af210962bd1e23e73c7c5de85b3 356 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 136 340 3.0E-46 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 TMO_3435 f0df9af210962bd1e23e73c7c5de85b3 356 Pfam PF01872 RibD C-terminal domain 138 314 2.7E-44 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 TMO_2515 56caf21e5a93da43485b17a0f5920797 410 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 22 401 4.9E-97 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_2515 56caf21e5a93da43485b17a0f5920797 410 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 214 228 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_2515 56caf21e5a93da43485b17a0f5920797 410 SUPERFAMILY SSF53383 37 402 7.79E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_2515 56caf21e5a93da43485b17a0f5920797 410 Gene3D G3DSA:3.90.1150.10 271 405 1.5E-34 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_2515 56caf21e5a93da43485b17a0f5920797 410 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 23 403 2.9E-129 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 TMO_2515 56caf21e5a93da43485b17a0f5920797 410 Gene3D G3DSA:3.40.640.10 18 270 4.3E-70 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_2515 56caf21e5a93da43485b17a0f5920797 410 PIRSF PIRSF001434 9 405 8.8E-118 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_3424 9a0dc13a325b8defa8f1dced37fe5737 359 Gene3D G3DSA:2.40.160.10 29 359 1.1E-50 T 14-10-2018 IPR023614 Porin domain superfamily TMO_3424 9a0dc13a325b8defa8f1dced37fe5737 359 SUPERFAMILY SSF56935 30 359 4.89E-31 T 14-10-2018 TMO_3424 9a0dc13a325b8defa8f1dced37fe5737 359 Pfam PF13609 Gram-negative porin 12 339 3.9E-48 T 14-10-2018 TMO_2951 f3b5e0021c732ade8b151d462e11608d 273 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 266 5.1E-104 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 TMO_2951 f3b5e0021c732ade8b151d462e11608d 273 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2951 f3b5e0021c732ade8b151d462e11608d 273 SMART SM00382 52 240 2.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2951 f3b5e0021c732ade8b151d462e11608d 273 Gene3D G3DSA:3.40.50.300 32 270 1.4E-72 T 14-10-2018 TMO_2951 f3b5e0021c732ade8b151d462e11608d 273 SUPERFAMILY SSF52540 39 266 7.04E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2951 f3b5e0021c732ade8b151d462e11608d 273 Pfam PF00005 ABC transporter 43 191 1.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0140 1ad5018c49903af0e5ddf80a80d602fa 399 Gene3D G3DSA:1.10.540.10 2 119 9.3E-23 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_a0140 1ad5018c49903af0e5ddf80a80d602fa 399 SUPERFAMILY SSF47203 231 399 1.14E-24 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_a0140 1ad5018c49903af0e5ddf80a80d602fa 399 Gene3D G3DSA:1.20.140.10 235 399 1.1E-39 T 14-10-2018 TMO_a0140 1ad5018c49903af0e5ddf80a80d602fa 399 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 1.5E-20 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_a0140 1ad5018c49903af0e5ddf80a80d602fa 399 Gene3D G3DSA:2.40.110.10 125 234 4.5E-37 T 14-10-2018 TMO_a0140 1ad5018c49903af0e5ddf80a80d602fa 399 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.6E-15 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_a0140 1ad5018c49903af0e5ddf80a80d602fa 399 SUPERFAMILY SSF56645 2 244 3.8E-70 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_a0140 1ad5018c49903af0e5ddf80a80d602fa 399 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 397 1.2E-25 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_2051 313e3380236f8e33f241a61b85b85147 408 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 1 401 3.6E-202 T 14-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 TMO_2051 313e3380236f8e33f241a61b85b85147 408 Pfam PF00155 Aminotransferase class I and II 46 390 2.2E-77 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_2051 313e3380236f8e33f241a61b85b85147 408 SUPERFAMILY SSF53383 2 398 1.28E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_2051 313e3380236f8e33f241a61b85b85147 408 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 244 253 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 TMO_2051 313e3380236f8e33f241a61b85b85147 408 Gene3D G3DSA:3.40.640.10 62 297 1.7E-167 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_2051 313e3380236f8e33f241a61b85b85147 408 Gene3D G3DSA:3.90.1150.10 14 387 1.7E-167 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 Gene3D G3DSA:3.40.50.720 8 293 1.1E-72 T 14-10-2018 TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 7.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 7.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 7.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 Pfam PF00106 short chain dehydrogenase 9 198 1.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 SUPERFAMILY SSF51735 1 233 2.88E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 192 2.1E-5 T 14-10-2018 TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 3.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0249 656e7909d0efacdbc4ba846bcf1a12fc 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 3.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0865 41ac41ce35982aaaa4b99c8bfb170bd5 378 Gene3D G3DSA:3.40.50.1980 29 376 7.2E-67 T 14-10-2018 TMO_c0865 41ac41ce35982aaaa4b99c8bfb170bd5 378 SUPERFAMILY SSF53807 30 347 3.45E-35 T 14-10-2018 TMO_c0865 41ac41ce35982aaaa4b99c8bfb170bd5 378 Pfam PF01497 Periplasmic binding protein 61 317 1.6E-17 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain TMO_b0032 596332555262aa3420c6d6b9fedaaec3 571 Pfam PF00916 Sulfate permease family 31 395 1.9E-77 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TMO_b0032 596332555262aa3420c6d6b9fedaaec3 571 Pfam PF01740 STAS domain 464 547 9.7E-12 T 14-10-2018 IPR002645 STAS domain TMO_b0032 596332555262aa3420c6d6b9fedaaec3 571 Gene3D G3DSA:3.30.750.24 453 569 4.7E-19 T 14-10-2018 IPR036513 STAS domain superfamily TMO_b0032 596332555262aa3420c6d6b9fedaaec3 571 SUPERFAMILY SSF52091 463 565 1.55E-16 T 14-10-2018 IPR036513 STAS domain superfamily TMO_d0058 acd5bf7ddc7c862b48cfc7e6a8110d73 403 SUPERFAMILY SSF117916 8 94 1.8E-13 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TMO_d0058 acd5bf7ddc7c862b48cfc7e6a8110d73 403 SUPERFAMILY SSF52540 146 391 9.16E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_d0058 acd5bf7ddc7c862b48cfc7e6a8110d73 403 Pfam PF01883 Iron-sulfur cluster assembly protein 13 82 2.0E-12 T 14-10-2018 IPR002744 MIP18 family-like TMO_d0058 acd5bf7ddc7c862b48cfc7e6a8110d73 403 Gene3D G3DSA:3.40.50.300 138 381 1.0E-80 T 14-10-2018 TMO_d0058 acd5bf7ddc7c862b48cfc7e6a8110d73 403 Hamap MF_02040 Iron-sulfur cluster carrier protein. 138 386 37.09 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein TMO_d0058 acd5bf7ddc7c862b48cfc7e6a8110d73 403 ProSitePatterns PS01215 Mrp family signature. 249 265 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 TMO_d0058 acd5bf7ddc7c862b48cfc7e6a8110d73 403 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 143 385 1.4E-97 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 TMO_d0058 acd5bf7ddc7c862b48cfc7e6a8110d73 403 Gene3D G3DSA:3.30.300.130 6 95 1.2E-6 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 Pfam PF13193 AMP-binding enzyme C-terminal domain 653 730 1.8E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 SUPERFAMILY SSF52777 14 224 2.56E-42 T 14-10-2018 TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 Pfam PF00668 Condensation domain 18 236 2.1E-23 T 14-10-2018 IPR001242 Condensation domain TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 Gene3D G3DSA:3.40.50.12780 241 639 2.1E-87 T 14-10-2018 TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 Pfam PF00550 Phosphopantetheine attachment site 759 822 6.6E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 Gene3D G3DSA:3.30.559.30 15 222 3.1E-51 T 14-10-2018 TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 SMART SM00823 Phosphopantetheine attachment site 757 826 5.1E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 Gene3D G3DSA:3.40.50.1820 746 845 2.5E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 Pfam PF00501 AMP-binding enzyme 258 645 3.9E-61 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 SUPERFAMILY SSF47336 751 822 3.4E-20 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 ProSitePatterns PS00012 Phosphopantetheine attachment site. 781 796 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 Gene3D G3DSA:3.30.300.30 640 741 9.4E-29 T 14-10-2018 TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 SUPERFAMILY SSF56801 216 764 4.45E-110 T 14-10-2018 TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 Gene3D G3DSA:3.30.559.10 148 164 3.1E-51 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0610 fe9666c4a83084623c2c4d8c4bf2d5ce 873 ProSitePatterns PS00455 Putative AMP-binding domain signature. 388 399 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_1955 57846e96c54675ba389a121e99521a72 262 Pfam PF02311 AraC-like ligand binding domain 25 119 8.7E-9 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_1955 57846e96c54675ba389a121e99521a72 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 249 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_1955 57846e96c54675ba389a121e99521a72 262 Gene3D G3DSA:1.10.10.60 155 260 6.3E-23 T 14-10-2018 TMO_1955 57846e96c54675ba389a121e99521a72 262 Pfam PF12833 Helix-turn-helix domain 177 255 1.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_1955 57846e96c54675ba389a121e99521a72 262 SUPERFAMILY SSF51182 9 172 1.48E-20 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_1955 57846e96c54675ba389a121e99521a72 262 SUPERFAMILY SSF46689 208 254 2.55E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1955 57846e96c54675ba389a121e99521a72 262 Gene3D G3DSA:2.60.120.10 10 109 5.0E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_1955 57846e96c54675ba389a121e99521a72 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 237 2.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_1955 57846e96c54675ba389a121e99521a72 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 253 2.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_1955 57846e96c54675ba389a121e99521a72 262 SMART SM00342 171 253 2.8E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_1955 57846e96c54675ba389a121e99521a72 262 SUPERFAMILY SSF46689 154 206 2.24E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 82 720 43.112 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 SMART SM00642 232 605 4.0E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 SUPERFAMILY SSF51445 161 602 1.1E-106 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 90 718 3.4E-260 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 PIRSF PIRSF000463 5 721 5.5E-263 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 Gene3D G3DSA:3.20.20.80 205 608 1.5E-151 T 14-10-2018 TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 SUPERFAMILY SSF81296 4 94 3.85E-8 T 14-10-2018 IPR014756 Immunoglobulin E-set TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 Gene3D G3DSA:2.60.40.1180 609 720 1.7E-35 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 Gene3D G3DSA:2.60.40.10 3 202 8.5E-57 T 14-10-2018 IPR013783 Immunoglobulin-like fold TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 SUPERFAMILY SSF81296 119 174 1.05E-10 T 14-10-2018 IPR014756 Immunoglobulin E-set TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 SUPERFAMILY SSF51011 609 718 1.25E-30 T 14-10-2018 TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 106 188 1.0E-21 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 614 718 5.8E-22 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TMO_a0213 bb36ca6c6e3b9e9b688eb2871ea8bdaf 721 Pfam PF00128 Alpha amylase, catalytic domain 248 328 3.0E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1191 1206 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SMART SM00823 Phosphopantetheine attachment site 1167 1235 1.3E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SMART SM00823 Phosphopantetheine attachment site 3756 3825 6.6E-10 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SMART SM00823 Phosphopantetheine attachment site 2720 2789 0.0083 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF47336 3755 3822 2.09E-17 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3780 3795 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.30.559.10 1723 2106 4.8E-113 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF56801 240 1180 1.19E-136 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.30.300.30 1051 1153 6.9E-11 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF56801 3245 3768 9.42E-118 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF52777 1723 1911 1.56E-31 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.30.300.30 635 716 1.2E-14 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.30.300.30 2609 2705 4.0E-28 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF52777 1916 2158 9.67E-54 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.30.559.10 1240 1409 2.1E-45 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF47336 1161 1231 1.7E-17 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF56801 2207 2733 2.09E-140 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 ProSitePatterns PS00455 Putative AMP-binding domain signature. 389 400 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF00501 AMP-binding enzyme 250 642 4.6E-82 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF00501 AMP-binding enzyme 2212 2615 4.5E-90 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF00501 AMP-binding enzyme 3248 3653 9.7E-79 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF52777 1246 1413 4.11E-32 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.30.559.10 2808 3164 9.9E-105 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF00668 Condensation domain 1250 1680 3.6E-39 T 14-10-2018 IPR001242 Condensation domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF00668 Condensation domain 2807 3225 3.9E-52 T 14-10-2018 IPR001242 Condensation domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF00668 Condensation domain 3 229 2.5E-42 T 14-10-2018 IPR001242 Condensation domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF00668 Condensation domain 1720 2174 1.4E-60 T 14-10-2018 IPR001242 Condensation domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3398 3409 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.30.559.30 1410 1684 5.1E-58 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.30.559.30 2975 3219 9.9E-105 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2230 2639 5.5E-120 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 272 666 2.2E-119 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3270 3675 2.1E-105 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF00550 Phosphopantetheine attachment site 2722 2785 3.9E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF00550 Phosphopantetheine attachment site 1169 1230 2.1E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF00550 Phosphopantetheine attachment site 3757 3821 1.9E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2350 2361 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF52777 2806 2961 9.23E-39 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF08242 Methyltransferase domain 763 867 2.5E-11 T 14-10-2018 IPR013217 Methyltransferase type 12 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.30.559.30 1913 2171 4.8E-113 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1559 1704 2.3E-26 T 14-10-2018 IPR010060 Non-ribosomal peptide synthase TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:1.10.1200.10 1154 1239 7.0E-25 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:1.10.1200.10 3746 3826 2.4E-22 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2744 2759 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.30.300.30 3647 3745 1.8E-23 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF53335 727 885 5.92E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.40.50.12780 2204 2608 6.8E-125 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.40.50.150 731 917 4.3E-27 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.40.50.12780 3238 3645 5.3E-110 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.40.50.12780 240 634 4.9E-120 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:3.30.559.30 1 220 1.9E-56 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF47336 2714 2785 5.23E-16 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Gene3D G3DSA:1.10.1200.10 2706 2790 1.4E-22 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF52777 2989 3224 5.67E-37 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF52777 2 216 3.95E-50 T 14-10-2018 TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF13193 AMP-binding enzyme C-terminal domain 2623 2695 1.3E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 Pfam PF13193 AMP-binding enzyme C-terminal domain 3661 3731 1.6E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0605 cb7a83b65bafd10a51e3e0400ccdd72d 3853 SUPERFAMILY SSF52777 1425 1679 8.89E-30 T 14-10-2018 TMO_2155 4256cbf0a724df4a5fce6b7e6a915455 790 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 139 3.4E-23 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_2155 4256cbf0a724df4a5fce6b7e6a915455 790 SUPERFAMILY SSF56003 131 782 8.77E-203 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TMO_2155 4256cbf0a724df4a5fce6b7e6a915455 790 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 158 720 4.7E-174 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_2155 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.30.365.10 466 634 1.9E-132 T 14-10-2018 TMO_2155 4256cbf0a724df4a5fce6b7e6a915455 790 SUPERFAMILY SSF54665 3 159 2.88E-40 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily TMO_2155 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.30.365.10 197 292 6.2E-65 T 14-10-2018 TMO_2155 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.30.365.10 174 406 6.2E-65 T 14-10-2018 TMO_2155 4256cbf0a724df4a5fce6b7e6a915455 790 SMART SM01008 18 139 7.1E-46 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_2155 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.90.1170.50 1 139 1.6E-41 T 14-10-2018 TMO_2155 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.30.365.10 434 780 1.9E-132 T 14-10-2018 TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 Gene3D G3DSA:1.20.1440.210 56 182 1.5E-29 T 14-10-2018 TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 SMART SM00388 254 323 1.1E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 8.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 8.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 483 8.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 SMART SM00387 369 483 4.4E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 Pfam PF05227 CHASE3 domain 51 185 1.7E-38 T 14-10-2018 IPR007891 CHASE3 TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 323 3.8E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 481 5.5E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 Gene3D G3DSA:3.30.565.10 322 483 5.8E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 SUPERFAMILY SSF47384 238 324 3.53E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 SUPERFAMILY SSF55874 312 483 1.1E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0466 5cf2593684bc1aabd58d1d188ea8431d 483 Gene3D G3DSA:1.10.287.130 214 321 4.3E-22 T 14-10-2018 TMO_0494 2fc46ae107363a8ac9958d36a61ca0cd 575 SUPERFAMILY SSF56317 5 266 2.75E-70 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_0494 2fc46ae107363a8ac9958d36a61ca0cd 575 Gene3D G3DSA:3.60.110.10 6 265 1.4E-74 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_0494 2fc46ae107363a8ac9958d36a61ca0cd 575 Gene3D G3DSA:3.60.110.10 288 573 8.0E-55 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_0494 2fc46ae107363a8ac9958d36a61ca0cd 575 SUPERFAMILY SSF56317 293 543 1.83E-55 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_0494 2fc46ae107363a8ac9958d36a61ca0cd 575 Pfam PF00795 Carbon-nitrogen hydrolase 295 541 4.8E-30 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TMO_0494 2fc46ae107363a8ac9958d36a61ca0cd 575 Pfam PF00795 Carbon-nitrogen hydrolase 7 247 5.0E-47 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TMO_2254 a1c9ed19690821c0f52a5a6f108f5e13 279 SUPERFAMILY SSF56300 3 266 9.95E-31 T 14-10-2018 TMO_2254 a1c9ed19690821c0f52a5a6f108f5e13 279 Pfam PF00149 Calcineurin-like phosphoesterase 5 248 1.0E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TMO_2254 a1c9ed19690821c0f52a5a6f108f5e13 279 Gene3D G3DSA:3.60.21.10 3 279 1.1E-18 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like TMO_1756 d31ee90f6b41e440003e940ac007dc2d 154 Pfam PF00376 MerR family regulatory protein 5 42 9.1E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_1756 d31ee90f6b41e440003e940ac007dc2d 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 7.5E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_1756 d31ee90f6b41e440003e940ac007dc2d 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 7.5E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_1756 d31ee90f6b41e440003e940ac007dc2d 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 7.5E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_1756 d31ee90f6b41e440003e940ac007dc2d 154 Gene3D G3DSA:1.10.1660.10 2 128 2.3E-36 T 14-10-2018 TMO_1756 d31ee90f6b41e440003e940ac007dc2d 154 Pfam PF09278 MerR, DNA binding 47 111 1.2E-20 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding TMO_1756 d31ee90f6b41e440003e940ac007dc2d 154 SMART SM00422 4 73 4.4E-29 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_1756 d31ee90f6b41e440003e940ac007dc2d 154 SUPERFAMILY SSF46955 4 129 5.49E-37 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily TMO_a0284 a79908bc9a76d84bb1a41264bd0532b9 398 Gene3D G3DSA:3.40.50.10540 3 387 1.3E-125 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_a0284 a79908bc9a76d84bb1a41264bd0532b9 398 Gene3D G3DSA:3.30.1540.10 235 324 1.3E-125 T 14-10-2018 TMO_a0284 a79908bc9a76d84bb1a41264bd0532b9 398 SUPERFAMILY SSF89796 1 397 4.58E-125 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_a0284 a79908bc9a76d84bb1a41264bd0532b9 398 Pfam PF02515 CoA-transferase family III 4 373 2.3E-119 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_a0054 85a0eccd820ec010ca35b95d6f373456 608 SUPERFAMILY SSF50952 67 417 1.83E-35 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 TMO_a0054 85a0eccd820ec010ca35b95d6f373456 608 SUPERFAMILY SSF49777 459 604 1.06E-36 T 14-10-2018 IPR036610 PEBP-like superfamily TMO_a0054 85a0eccd820ec010ca35b95d6f373456 608 Pfam PF07995 Glucose / Sorbosone dehydrogenase 152 338 9.2E-18 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase TMO_a0054 85a0eccd820ec010ca35b95d6f373456 608 Pfam PF01161 Phosphatidylethanolamine-binding protein 466 604 7.5E-29 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein TMO_a0054 85a0eccd820ec010ca35b95d6f373456 608 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 474 602 5.9E-26 T 14-10-2018 IPR005247 YbhB/YbcL TMO_a0054 85a0eccd820ec010ca35b95d6f373456 608 Gene3D G3DSA:2.120.10.30 68 416 1.5E-33 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TMO_a0054 85a0eccd820ec010ca35b95d6f373456 608 Gene3D G3DSA:3.90.280.10 442 606 3.9E-42 T 14-10-2018 IPR036610 PEBP-like superfamily TMO_1175 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.30.365.10 19 295 1.9E-110 T 14-10-2018 TMO_1175 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.90.1170.50 35 140 1.9E-110 T 14-10-2018 TMO_1175 a0c0bcdd08a991a8ee79267a3dc2d415 795 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 20 140 1.9E-30 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_1175 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.30.365.10 434 783 1.7E-146 T 14-10-2018 TMO_1175 a0c0bcdd08a991a8ee79267a3dc2d415 795 SUPERFAMILY SSF56003 132 787 9.29E-212 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TMO_1175 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.30.365.10 141 373 1.9E-110 T 14-10-2018 TMO_1175 a0c0bcdd08a991a8ee79267a3dc2d415 795 SMART SM01008 20 140 1.6E-52 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_1175 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.30.365.10 468 637 1.7E-146 T 14-10-2018 TMO_1175 a0c0bcdd08a991a8ee79267a3dc2d415 795 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 159 723 2.9E-179 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_1175 a0c0bcdd08a991a8ee79267a3dc2d415 795 SUPERFAMILY SSF54665 4 159 4.32E-46 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily TMO_2616 55e5357fd65af9fd189194c7a5aace77 119 Gene3D G3DSA:3.30.420.100 1 119 6.5E-44 T 14-10-2018 TMO_2616 55e5357fd65af9fd189194c7a5aace77 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 119 1.7E-43 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2616 55e5357fd65af9fd189194c7a5aace77 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 119 28.725 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2616 55e5357fd65af9fd189194c7a5aace77 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 119 1.5E-41 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2616 55e5357fd65af9fd189194c7a5aace77 119 SUPERFAMILY SSF53137 8 117 2.18E-52 T 14-10-2018 TMO_0163 cac97c891e4444166289113822ef39b4 197 SUPERFAMILY SSF55811 3 161 5.55E-42 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TMO_0163 cac97c891e4444166289113822ef39b4 197 Pfam PF00293 NUDIX domain 40 108 2.7E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_0163 cac97c891e4444166289113822ef39b4 197 Gene3D G3DSA:3.90.79.10 36 171 1.0E-38 T 14-10-2018 TMO_0163 cac97c891e4444166289113822ef39b4 197 Gene3D G3DSA:2.20.70.10 1 35 2.3E-17 T 14-10-2018 TMO_0163 cac97c891e4444166289113822ef39b4 197 Pfam PF14803 Nudix N-terminal 3 35 4.8E-17 T 14-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 TMO_0163 cac97c891e4444166289113822ef39b4 197 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_0163 cac97c891e4444166289113822ef39b4 197 PRINTS PR00502 NUDIX hydrolase family signature 79 94 7.4E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TMO_0163 cac97c891e4444166289113822ef39b4 197 PRINTS PR00502 NUDIX hydrolase family signature 65 79 7.4E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TMO_2712 bdae2ec6b534ddebd086f81550932150 568 Pfam PF02096 60Kd inner membrane protein 366 562 4.9E-61 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TMO_2712 bdae2ec6b534ddebd086f81550932150 568 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 364 562 2.7E-70 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2712 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR01900 YidC translocation/secretion protein signature 517 541 1.5E-21 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TMO_2712 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR01900 YidC translocation/secretion protein signature 498 513 1.5E-21 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TMO_2712 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR01900 YidC translocation/secretion protein signature 350 366 1.5E-21 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TMO_2712 bdae2ec6b534ddebd086f81550932150 568 Gene3D G3DSA:2.70.98.90 71 344 3.8E-38 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily TMO_2712 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR00701 60kDa inner membrane protein signature 254 269 2.7E-19 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TMO_2712 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR00701 60kDa inner membrane protein signature 426 449 2.7E-19 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TMO_2712 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR00701 60kDa inner membrane protein signature 80 101 2.7E-19 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TMO_2712 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR00701 60kDa inner membrane protein signature 335 355 2.7E-19 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TMO_2712 bdae2ec6b534ddebd086f81550932150 568 Pfam PF14849 YidC periplasmic domain 74 353 1.8E-86 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain TMO_2712 bdae2ec6b534ddebd086f81550932150 568 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 363 1.6E-92 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal TMO_2712 bdae2ec6b534ddebd086f81550932150 568 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 564 22.129 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 TMO_a0267 5911312885ab5efc33be3587e14e5b37 394 Pfam PF07690 Major Facilitator Superfamily 219 389 2.6E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_a0267 5911312885ab5efc33be3587e14e5b37 394 SUPERFAMILY SSF103473 12 390 2.75E-51 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_a0267 5911312885ab5efc33be3587e14e5b37 394 Hamap MF_02091 Uncharacterized MFS-type transporter YfcJ [yfcJ]. 12 388 37.2 T 14-10-2018 IPR037541 Uncharacterized MFS-type transporter YfcJ TMO_a0267 5911312885ab5efc33be3587e14e5b37 394 Gene3D G3DSA:1.20.1250.20 5 390 1.9E-41 T 14-10-2018 TMO_0917 0385903a888df20e25610028b0692564 385 SUPERFAMILY SSF55073 232 376 3.92E-32 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_0917 0385903a888df20e25610028b0692564 385 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 375 2.3E-29 T 14-10-2018 IPR000160 GGDEF domain TMO_0917 0385903a888df20e25610028b0692564 385 SMART SM00267 216 384 3.5E-37 T 14-10-2018 IPR000160 GGDEF domain TMO_0917 0385903a888df20e25610028b0692564 385 Gene3D G3DSA:3.30.70.270 221 382 4.3E-38 T 14-10-2018 TMO_0917 0385903a888df20e25610028b0692564 385 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 375 1.8E-30 T 14-10-2018 IPR000160 GGDEF domain TMO_a0074 17888cf86615d88910ccc56f779a4e47 475 SUPERFAMILY SSF56112 43 298 6.47E-57 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_a0074 17888cf86615d88910ccc56f779a4e47 475 Gene3D G3DSA:1.10.510.10 40 300 1.1E-50 T 14-10-2018 TMO_a0074 17888cf86615d88910ccc56f779a4e47 475 SMART SM00219 47 299 4.1E-8 T 14-10-2018 IPR020635 Tyrosine-protein kinase, catalytic domain GO:0004713|GO:0006468 TMO_a0074 17888cf86615d88910ccc56f779a4e47 475 Gene3D G3DSA:1.25.40.10 377 466 3.2E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_a0074 17888cf86615d88910ccc56f779a4e47 475 Pfam PF00069 Protein kinase domain 51 298 1.8E-34 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 TMO_a0074 17888cf86615d88910ccc56f779a4e47 475 SUPERFAMILY SSF81901 391 460 2.75E-5 T 14-10-2018 TMO_a0074 17888cf86615d88910ccc56f779a4e47 475 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 166 178 - T 14-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 TMO_1092 774176280e4ed8530211d8dc368620df 142 Pfam PF10768 Class II flagellar assembly regulator 1 138 2.2E-40 T 14-10-2018 IPR019704 Flagellar assembly regulator FliX, class II GO:0044781 TMO_3521 7724dfb55fefc446fd4d4606dafdfabd 181 SUPERFAMILY SSF117916 101 181 4.36E-28 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TMO_3521 7724dfb55fefc446fd4d4606dafdfabd 181 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 117 181 7.0E-25 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TMO_3521 7724dfb55fefc446fd4d4606dafdfabd 181 SUPERFAMILY SSF110836 1 90 1.18E-27 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily TMO_3521 7724dfb55fefc446fd4d4606dafdfabd 181 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 88 2.1E-26 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal TMO_3521 7724dfb55fefc446fd4d4606dafdfabd 181 Pfam PF01106 NifU-like domain 113 178 4.1E-30 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TMO_3521 7724dfb55fefc446fd4d4606dafdfabd 181 SMART SM00932 3 88 8.1E-40 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal TMO_3521 7724dfb55fefc446fd4d4606dafdfabd 181 PIRSF PIRSF036773 1 181 2.8E-70 T 14-10-2018 IPR035433 NFU1-like TMO_3521 7724dfb55fefc446fd4d4606dafdfabd 181 Gene3D G3DSA:3.30.300.130 107 181 2.0E-31 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TMO_3521 7724dfb55fefc446fd4d4606dafdfabd 181 Gene3D G3DSA:3.30.1370.70 1 95 6.7E-29 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily TMO_3330 d3d3f320c71278fa01ab53efa2aebf05 428 Pfam PF01546 Peptidase family M20/M25/M40 100 410 1.9E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 TMO_3330 d3d3f320c71278fa01ab53efa2aebf05 428 SUPERFAMILY SSF55031 208 312 5.08E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TMO_3330 d3d3f320c71278fa01ab53efa2aebf05 428 Gene3D G3DSA:3.30.70.360 208 325 4.6E-97 T 14-10-2018 TMO_3330 d3d3f320c71278fa01ab53efa2aebf05 428 Gene3D G3DSA:3.40.630.10 45 401 4.6E-97 T 14-10-2018 TMO_3330 d3d3f320c71278fa01ab53efa2aebf05 428 Pfam PF07687 Peptidase dimerisation domain 204 313 1.8E-19 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain TMO_3330 d3d3f320c71278fa01ab53efa2aebf05 428 SUPERFAMILY SSF53187 38 408 3.71E-54 T 14-10-2018 TMO_3330 d3d3f320c71278fa01ab53efa2aebf05 428 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 41 410 6.5E-116 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 TMO_3330 d3d3f320c71278fa01ab53efa2aebf05 428 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 99 108 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 SUPERFAMILY SSF52949 8 175 3.94E-27 T 14-10-2018 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 Gene3D G3DSA:3.40.630.10 158 491 4.3E-130 T 14-10-2018 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 177 482 3.1E-122 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 SUPERFAMILY SSF53187 173 488 2.57E-117 T 14-10-2018 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 Gene3D G3DSA:3.40.220.10 2 154 2.4E-29 T 14-10-2018 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 337 344 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 17 140 1.9E-24 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 491 35.603 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 PRINTS PR00481 Cytosol aminopeptidase signature 333 353 9.9E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 PRINTS PR00481 Cytosol aminopeptidase signature 311 332 9.9E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 PRINTS PR00481 Cytosol aminopeptidase signature 274 295 9.9E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 PRINTS PR00481 Cytosol aminopeptidase signature 252 269 9.9E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_1846 bcbff7c9045f6dc69e32c2635c8903b1 494 PRINTS PR00481 Cytosol aminopeptidase signature 362 377 9.9E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_2179 d1c134f51316e18c73942377f706eaf4 184 Gene3D G3DSA:1.20.1260.10 4 156 2.1E-24 T 14-10-2018 IPR012347 Ferritin-like TMO_2179 d1c134f51316e18c73942377f706eaf4 184 Pfam PF00210 Ferritin-like domain 21 154 5.0E-7 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 TMO_2179 d1c134f51316e18c73942377f706eaf4 184 SUPERFAMILY SSF47240 15 159 1.08E-16 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_0793 2f87f546cf3b0c016cf96ea474aea2b8 424 Pfam PF13458 Periplasmic binding protein 48 384 2.0E-72 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_0793 2f87f546cf3b0c016cf96ea474aea2b8 424 Gene3D G3DSA:3.40.50.2300 72 377 6.7E-96 T 14-10-2018 TMO_0793 2f87f546cf3b0c016cf96ea474aea2b8 424 SUPERFAMILY SSF53822 48 419 8.75E-76 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_0793 2f87f546cf3b0c016cf96ea474aea2b8 424 Gene3D G3DSA:3.40.50.2300 167 384 6.7E-96 T 14-10-2018 TMO_3378 827e6b2ebae925af072fd1ae45dd30d8 404 Gene3D G3DSA:1.20.1250.20 16 391 6.1E-38 T 14-10-2018 TMO_3378 827e6b2ebae925af072fd1ae45dd30d8 404 Pfam PF07690 Major Facilitator Superfamily 25 344 4.2E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_3378 827e6b2ebae925af072fd1ae45dd30d8 404 SUPERFAMILY SSF103473 13 392 7.72E-48 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Gene3D G3DSA:3.30.470.20 120 402 1.5E-125 T 14-10-2018 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 SUPERFAMILY SSF52440 564 685 6.47E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Gene3D G3DSA:3.40.50.20 561 673 1.6E-45 T 14-10-2018 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Gene3D G3DSA:3.40.50.1380 946 1081 1.1E-40 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Gene3D G3DSA:3.40.50.20 1 116 1.4E-48 T 14-10-2018 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 SMART SM00851 965 1051 3.7E-35 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 547 6.9E-39 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 SUPERFAMILY SSF52335 945 1079 6.93E-41 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1071 13.091 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 2.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Gene3D G3DSA:3.30.470.20 676 945 1.2E-111 T 14-10-2018 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 SUPERFAMILY SSF52440 1 127 1.44E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 SMART SM01096 425 547 5.9E-67 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 SUPERFAMILY SSF56059 128 400 2.3E-105 T 14-10-2018 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 849 856 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 SUPERFAMILY SSF48108 395 549 1.31E-46 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1062 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Pfam PF02142 MGS-like domain 966 1051 7.1E-21 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Gene3D G3DSA:1.10.1030.10 404 549 6.9E-41 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 SUPERFAMILY SSF56059 684 943 6.89E-101 T 14-10-2018 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1079 13.471 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 684 885 4.6E-35 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_c0110 94afad92ee4ab0b16b55331e1d74090c 1081 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.5E-69 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 11 460 3.5E-191 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 ProSitePatterns PS01244 Aconitase family signature 2. 395 408 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 PRINTS PR00415 Aconitase family signature 294 308 3.4E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 PRINTS PR00415 Aconitase family signature 395 408 3.4E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 PRINTS PR00415 Aconitase family signature 116 124 3.4E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 PRINTS PR00415 Aconitase family signature 141 156 3.4E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 PRINTS PR00415 Aconitase family signature 217 230 3.4E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 PRINTS PR00415 Aconitase family signature 127 140 3.4E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 PRINTS PR00415 Aconitase family signature 203 216 3.4E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 PRINTS PR00415 Aconitase family signature 341 352 3.4E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 ProSitePatterns PS00450 Aconitase family signature 1. 337 353 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 Pfam PF00330 Aconitase family (aconitate hydratase) 17 453 2.1E-135 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 Gene3D G3DSA:3.30.499.20 13 294 8.7E-91 T 14-10-2018 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 SUPERFAMILY SSF53732 9 461 1.57E-148 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TMO_b0547 59caab39b8700fe965787dbabc2dc39c 464 Gene3D G3DSA:3.30.499.10 322 464 4.6E-47 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TMO_c0028 e29dc8ba25e6aa0a56df9033a5bc9c8e 210 Pfam PF08808 RES domain 29 177 1.3E-21 T 14-10-2018 IPR014914 RES domain TMO_c0028 e29dc8ba25e6aa0a56df9033a5bc9c8e 210 SMART SM00953 28 175 3.2E-15 T 14-10-2018 IPR014914 RES domain TMO_1597 83935af110cb5c5415ca3a9873a61b24 359 Pfam PF07650 KH domain 267 343 7.6E-14 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_1597 83935af110cb5c5415ca3a9873a61b24 359 Pfam PF01926 50S ribosome-binding GTPase 69 184 2.5E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_1597 83935af110cb5c5415ca3a9873a61b24 359 SUPERFAMILY SSF54814 240 356 5.17E-37 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TMO_1597 83935af110cb5c5415ca3a9873a61b24 359 Hamap MF_00367 GTPase Era [era]. 64 355 31.251 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1597 83935af110cb5c5415ca3a9873a61b24 359 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 66 226 7.3E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_1597 83935af110cb5c5415ca3a9873a61b24 359 SUPERFAMILY SSF52540 70 264 7.39E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1597 83935af110cb5c5415ca3a9873a61b24 359 TIGRFAM TIGR00436 era: GTP-binding protein Era 67 338 2.5E-67 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1597 83935af110cb5c5415ca3a9873a61b24 359 Gene3D G3DSA:3.40.50.300 61 244 1.9E-40 T 14-10-2018 TMO_1597 83935af110cb5c5415ca3a9873a61b24 359 Gene3D G3DSA:3.30.300.20 245 357 1.5E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 Gene3D G3DSA:1.10.287.950 185 469 9.1E-51 T 14-10-2018 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 Pfam PF00672 HAMP domain 128 175 3.6E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 SUPERFAMILY SSF58104 154 468 1.28E-58 T 14-10-2018 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 SMART SM00283 215 469 1.8E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 288 439 8.6E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 Gene3D G3DSA:3.30.450.20 6 103 2.2E-35 T 14-10-2018 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 Pfam PF08269 Cache domain 8 105 6.0E-28 T 14-10-2018 IPR004010 Double Cache domain 2 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 Gene3D G3DSA:1.10.8.500 128 177 7.9E-12 T 14-10-2018 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 SMART SM00304 126 179 4.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 2.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 236 265 2.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 313 340 2.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0214 47cf2edb1a65e2aad8a2e68ecd44051b 475 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 342 371 2.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 583 602 5.3E-29 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 519 5.3E-29 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 232 246 5.3E-29 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 384 398 5.3E-29 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 618 5.3E-29 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 540 5.3E-29 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 153 661 1.8E-88 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 108 692 2.5E-188 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 89 693 9.1E-179 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 Gene3D G3DSA:3.40.50.1000 365 635 7.5E-93 T 14-10-2018 IPR023214 HAD superfamily TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 Pfam PF00702 haloacid dehalogenase-like hydrolase 380 597 1.9E-44 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 SUPERFAMILY SSF56784 382 690 1.14E-58 T 14-10-2018 IPR036412 HAD-like superfamily TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 Gene3D G3DSA:2.70.150.20 175 287 2.7E-41 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 367 382 1.4E-13 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 560 577 1.4E-13 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 93 112 1.4E-13 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 171 189 1.4E-13 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 656 670 1.4E-13 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 151 170 1.4E-13 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 305 319 1.4E-13 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 Pfam PF00122 E1-E2 ATPase 182 362 9.5E-54 T 14-10-2018 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 386 392 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 SUPERFAMILY SSF81665 150 658 2.35E-14 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 SUPERFAMILY SSF81653 186 282 1.31E-24 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TMO_1454 401e97c82698ca2d8166a98b0d7e6c95 697 Gene3D G3DSA:3.40.1110.10 395 515 7.5E-93 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_0556 cce7126c6b85fef0a3c5af85921a2629 346 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 45 282 1.2E-59 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 TMO_0556 cce7126c6b85fef0a3c5af85921a2629 346 Gene3D G3DSA:3.40.190.170 31 344 1.6E-124 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_0556 cce7126c6b85fef0a3c5af85921a2629 346 PIRSF PIRSF006470 2 343 6.9E-91 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 TMO_0556 cce7126c6b85fef0a3c5af85921a2629 346 SUPERFAMILY SSF53850 80 269 2.78E-7 T 14-10-2018 TMO_0556 cce7126c6b85fef0a3c5af85921a2629 346 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 327 2.9E-76 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_3011 81f65eef89a26130fba207e51ac80123 515 SUPERFAMILY SSF56235 1 515 5.02E-131 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_3011 81f65eef89a26130fba207e51ac80123 515 Gene3D G3DSA:1.10.246.130 227 319 2.7E-13 T 14-10-2018 TMO_3011 81f65eef89a26130fba207e51ac80123 515 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 337 355 9.3E-31 T 14-10-2018 TMO_3011 81f65eef89a26130fba207e51ac80123 515 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 95 113 9.3E-31 T 14-10-2018 TMO_3011 81f65eef89a26130fba207e51ac80123 515 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 113 132 9.3E-31 T 14-10-2018 TMO_3011 81f65eef89a26130fba207e51ac80123 515 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 361 379 9.3E-31 T 14-10-2018 TMO_3011 81f65eef89a26130fba207e51ac80123 515 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 22 47 9.3E-31 T 14-10-2018 TMO_3011 81f65eef89a26130fba207e51ac80123 515 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 240 259 9.3E-31 T 14-10-2018 TMO_3011 81f65eef89a26130fba207e51ac80123 515 Gene3D G3DSA:3.60.20.40 337 515 9.6E-49 T 14-10-2018 TMO_3011 81f65eef89a26130fba207e51ac80123 515 Pfam PF01019 Gamma-glutamyltranspeptidase 15 510 2.3E-113 T 14-10-2018 TMO_0262 e03afc65da074dfa6340a82d15384461 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0262 e03afc65da074dfa6340a82d15384461 305 SUPERFAMILY SSF53850 88 296 2.35E-31 T 14-10-2018 TMO_0262 e03afc65da074dfa6340a82d15384461 305 Gene3D G3DSA:3.40.190.10 92 284 1.3E-54 T 14-10-2018 TMO_0262 e03afc65da074dfa6340a82d15384461 305 Pfam PF03466 LysR substrate binding domain 88 287 2.4E-34 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0262 e03afc65da074dfa6340a82d15384461 305 SUPERFAMILY SSF46785 1 110 6.34E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0262 e03afc65da074dfa6340a82d15384461 305 Gene3D G3DSA:3.40.190.10 161 268 1.3E-54 T 14-10-2018 TMO_0262 e03afc65da074dfa6340a82d15384461 305 Gene3D G3DSA:1.10.10.10 1 84 4.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0262 e03afc65da074dfa6340a82d15384461 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0262 e03afc65da074dfa6340a82d15384461 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0262 e03afc65da074dfa6340a82d15384461 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0020 e7fe53617ff886d4e469435b2125218e 291 Pfam PF01061 ABC-2 type transporter 34 245 3.0E-15 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TMO_0020 e7fe53617ff886d4e469435b2125218e 291 PRINTS PR00164 ABC-2 type transport system membrane protein signature 165 189 1.3E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TMO_0020 e7fe53617ff886d4e469435b2125218e 291 PRINTS PR00164 ABC-2 type transport system membrane protein signature 203 222 1.3E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TMO_0020 e7fe53617ff886d4e469435b2125218e 291 PRINTS PR00164 ABC-2 type transport system membrane protein signature 223 242 1.3E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TMO_3558 e0ede180c28d54cad30d4653165d8e25 424 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 201 387 5.8E-67 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TMO_3558 e0ede180c28d54cad30d4653165d8e25 424 Pfam PF02441 Flavoprotein 5 178 3.3E-46 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 TMO_3558 e0ede180c28d54cad30d4653165d8e25 424 Gene3D G3DSA:3.40.50.1950 1 187 1.1E-60 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TMO_3558 e0ede180c28d54cad30d4653165d8e25 424 Gene3D G3DSA:3.40.50.10300 196 418 2.1E-72 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TMO_3558 e0ede180c28d54cad30d4653165d8e25 424 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 410 1.5E-119 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 TMO_3558 e0ede180c28d54cad30d4653165d8e25 424 SUPERFAMILY SSF102645 199 415 9.42E-72 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TMO_3558 e0ede180c28d54cad30d4653165d8e25 424 SUPERFAMILY SSF52507 2 179 2.09E-62 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TMO_3535 3459f75c304d10855942a89cc3abe749 534 Pfam PF00795 Carbon-nitrogen hydrolase 276 490 9.9E-23 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TMO_3535 3459f75c304d10855942a89cc3abe749 534 SUPERFAMILY SSF56317 228 505 1.57E-37 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_3535 3459f75c304d10855942a89cc3abe749 534 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 68 475 2.7E-85 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TMO_3535 3459f75c304d10855942a89cc3abe749 534 Gene3D G3DSA:3.60.110.10 239 488 2.6E-12 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_3535 3459f75c304d10855942a89cc3abe749 534 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 13 512 20.472 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TMO_c0392 2ed3cc8983167f3f126cde2d8c529f24 294 SMART SM00342 203 285 7.4E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0392 2ed3cc8983167f3f126cde2d8c529f24 294 Pfam PF02311 AraC-like ligand binding domain 24 164 3.7E-17 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_c0392 2ed3cc8983167f3f126cde2d8c529f24 294 SUPERFAMILY SSF46689 239 288 8.24E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0392 2ed3cc8983167f3f126cde2d8c529f24 294 Gene3D G3DSA:1.10.10.60 185 245 5.3E-14 T 14-10-2018 TMO_c0392 2ed3cc8983167f3f126cde2d8c529f24 294 SUPERFAMILY SSF46689 187 237 6.87E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0392 2ed3cc8983167f3f126cde2d8c529f24 294 Gene3D G3DSA:1.10.10.60 246 290 1.8E-10 T 14-10-2018 TMO_c0392 2ed3cc8983167f3f126cde2d8c529f24 294 SUPERFAMILY SSF51215 31 157 3.92E-14 T 14-10-2018 IPR037923 Transcription regulator HTH-like TMO_c0392 2ed3cc8983167f3f126cde2d8c529f24 294 Pfam PF12833 Helix-turn-helix domain 209 286 2.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2146 ab5fccccc933b5da4c4d07653713a2ac 273 SUPERFAMILY SSF161098 78 261 1.44E-27 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2146 ab5fccccc933b5da4c4d07653713a2ac 273 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 68 265 1.2E-69 T 14-10-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 TMO_2146 ab5fccccc933b5da4c4d07653713a2ac 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 272 9.7E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2146 ab5fccccc933b5da4c4d07653713a2ac 273 Gene3D G3DSA:1.10.3720.10 79 272 2.1E-23 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1993 37f8f9b7386a868956ae6315284265b4 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 96 1.4E-30 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 TMO_1993 37f8f9b7386a868956ae6315284265b4 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_1993 37f8f9b7386a868956ae6315284265b4 469 SMART SM01230 103 379 6.1E-137 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_1993 37f8f9b7386a868956ae6315284265b4 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 468 3.1E-197 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_1993 37f8f9b7386a868956ae6315284265b4 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 TMO_1993 37f8f9b7386a868956ae6315284265b4 469 Gene3D G3DSA:3.10.20.70 3 105 5.9E-39 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_1993 37f8f9b7386a868956ae6315284265b4 469 SUPERFAMILY SSF55931 103 468 2.35E-132 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TMO_1993 37f8f9b7386a868956ae6315284265b4 469 Gene3D G3DSA:3.30.590.10 106 455 2.3E-134 T 14-10-2018 TMO_1993 37f8f9b7386a868956ae6315284265b4 469 SUPERFAMILY SSF54368 5 101 2.49E-36 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_1993 37f8f9b7386a868956ae6315284265b4 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.9E-132 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_1993 37f8f9b7386a868956ae6315284265b4 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 TMO_a0050 d7c8e4b98bf4d5153d232a816b601b40 261 SUPERFAMILY SSF160104 15 252 3.27E-28 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 TMO_a0050 d7c8e4b98bf4d5153d232a816b601b40 261 Gene3D G3DSA:2.40.400.10 2 257 4.6E-64 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 TMO_a0050 d7c8e4b98bf4d5153d232a816b601b40 261 Pfam PF06314 Acetoacetate decarboxylase (ADC) 7 252 4.6E-35 T 14-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 TMO_d0049 200a785564c24aa99d66998df3013783 546 SMART SM00382 356 543 5.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_d0049 200a785564c24aa99d66998df3013783 546 Pfam PF00664 ABC transporter transmembrane region 20 206 3.7E-8 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_d0049 200a785564c24aa99d66998df3013783 546 Gene3D G3DSA:3.40.50.300 314 542 2.8E-39 T 14-10-2018 TMO_d0049 200a785564c24aa99d66998df3013783 546 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 4 537 1.3E-142 T 14-10-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015833|GO:0016021|GO:1904680 TMO_d0049 200a785564c24aa99d66998df3013783 546 Gene3D G3DSA:1.20.1560.10 6 305 4.9E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_d0049 200a785564c24aa99d66998df3013783 546 Pfam PF00005 ABC transporter 349 484 3.2E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_d0049 200a785564c24aa99d66998df3013783 546 SUPERFAMILY SSF90123 9 304 9.94E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_d0049 200a785564c24aa99d66998df3013783 546 SUPERFAMILY SSF52540 322 536 2.03E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0440 0fec0ad9be8c3636c87ec88e297e1719 469 SMART SM00729 66 284 1.4E-50 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_0440 0fec0ad9be8c3636c87ec88e297e1719 469 Pfam PF04055 Radical SAM superfamily 71 242 1.0E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_0440 0fec0ad9be8c3636c87ec88e297e1719 469 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 33 460 1.0E-128 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 TMO_0440 0fec0ad9be8c3636c87ec88e297e1719 469 Gene3D G3DSA:1.10.10.920 379 466 2.8E-12 T 14-10-2018 TMO_0440 0fec0ad9be8c3636c87ec88e297e1719 469 SUPERFAMILY SSF102114 30 458 1.44E-114 T 14-10-2018 TMO_0440 0fec0ad9be8c3636c87ec88e297e1719 469 Gene3D G3DSA:3.80.30.20 23 378 6.1E-108 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TMO_0440 0fec0ad9be8c3636c87ec88e297e1719 469 PIRSF PIRSF000167 21 468 1.3E-159 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 TMO_1732 6125329bb3f3173ee5d09a9c05c3d73c 251 Hamap MF_01385 Urease accessory protein UreF [ureF]. 27 251 28.305 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 TMO_1732 6125329bb3f3173ee5d09a9c05c3d73c 251 PIRSF PIRSF009467 24 251 1.0E-59 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 TMO_1732 6125329bb3f3173ee5d09a9c05c3d73c 251 Gene3D G3DSA:1.10.4190.10 22 226 1.2E-49 T 14-10-2018 IPR038277 UreF domain superfamily TMO_1732 6125329bb3f3173ee5d09a9c05c3d73c 251 Pfam PF01730 UreF 60 208 4.9E-28 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 SUPERFAMILY SSF58104 241 555 1.05E-59 T 14-10-2018 TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 Gene3D G3DSA:1.10.8.500 213 264 2.3E-14 T 14-10-2018 TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 SMART SM00304 213 266 5.3E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 Gene3D G3DSA:1.10.287.950 276 558 2.8E-53 T 14-10-2018 TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 427 7.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 352 7.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 477 506 7.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 429 458 7.2E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 180 3.0E-28 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 Pfam PF00672 HAMP domain 213 261 4.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 371 522 6.5E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2911 b4989dab2e5b26465a55b592eb539f6f 562 SMART SM00283 302 556 4.9E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_3154 3d5868add8e9cc75ace035a05aa28305 345 Pfam PF02277 Phosphoribosyltransferase 25 340 6.7E-114 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TMO_3154 3d5868add8e9cc75ace035a05aa28305 345 Gene3D G3DSA:3.40.50.10210 69 323 2.8E-107 T 14-10-2018 TMO_3154 3d5868add8e9cc75ace035a05aa28305 345 SUPERFAMILY SSF52733 18 340 5.62E-107 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TMO_3154 3d5868add8e9cc75ace035a05aa28305 345 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 25 342 34.256 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TMO_3154 3d5868add8e9cc75ace035a05aa28305 345 Gene3D G3DSA:1.10.1610.10 25 332 2.8E-107 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TMO_3154 3d5868add8e9cc75ace035a05aa28305 345 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 26 340 4.9E-115 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TMO_0568 4493afd633ccc58fd4c4fb0507f13951 263 SUPERFAMILY SSF53639 24 239 6.67E-54 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_0568 4493afd633ccc58fd4c4fb0507f13951 263 Gene3D G3DSA:3.40.225.10 22 263 1.1E-61 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_0568 4493afd633ccc58fd4c4fb0507f13951 263 SMART SM01007 30 211 1.2E-41 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_0568 4493afd633ccc58fd4c4fb0507f13951 263 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 32 211 2.8E-39 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_0286 87f577a97a54855c995bcb3f576aa959 282 Gene3D G3DSA:1.10.12.10 208 265 5.5E-10 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_0286 87f577a97a54855c995bcb3f576aa959 282 SUPERFAMILY SSF52096 3 264 4.02E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_0286 87f577a97a54855c995bcb3f576aa959 282 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 265 5.0E-51 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_0286 87f577a97a54855c995bcb3f576aa959 282 Gene3D G3DSA:3.90.226.10 2 204 4.6E-61 T 14-10-2018 TMO_2412 c6f4642f3cc76526096ddbdfba25e8c2 474 SMART SM00530 4 59 2.7E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_2412 c6f4642f3cc76526096ddbdfba25e8c2 474 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 313 469 3.8E-74 T 14-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator TMO_2412 c6f4642f3cc76526096ddbdfba25e8c2 474 Pfam PF06114 IrrE N-terminal-like domain 205 312 2.9E-15 T 14-10-2018 IPR010359 IrrE N-terminal-like domain TMO_2412 c6f4642f3cc76526096ddbdfba25e8c2 474 Gene3D G3DSA:1.10.260.40 1 66 3.0E-16 T 14-10-2018 TMO_2412 c6f4642f3cc76526096ddbdfba25e8c2 474 Pfam PF01381 Helix-turn-helix 5 57 3.0E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_2412 c6f4642f3cc76526096ddbdfba25e8c2 474 SUPERFAMILY SSF47413 2 64 9.12E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_2412 c6f4642f3cc76526096ddbdfba25e8c2 474 PIRSF PIRSF019251 1 474 6.6E-189 T 14-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 TMO_0989 570fee1af3f3df43a3c7e425e4a43167 308 Gene3D G3DSA:1.20.1510.10 18 217 1.4E-55 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_0989 570fee1af3f3df43a3c7e425e4a43167 308 Pfam PF01545 Cation efflux family 24 217 3.1E-40 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_0989 570fee1af3f3df43a3c7e425e4a43167 308 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 20 297 1.0E-66 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_0989 570fee1af3f3df43a3c7e425e4a43167 308 Gene3D G3DSA:3.30.70.1350 218 300 1.5E-27 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TMO_0989 570fee1af3f3df43a3c7e425e4a43167 308 SUPERFAMILY SSF161111 18 218 6.28E-52 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_0989 570fee1af3f3df43a3c7e425e4a43167 308 SUPERFAMILY SSF160240 221 298 6.67E-22 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TMO_0989 570fee1af3f3df43a3c7e425e4a43167 308 Pfam PF16916 Dimerisation domain of Zinc Transporter 221 297 2.4E-23 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain TMO_d0039 3afa600aa16b52a42808fcb299d05639 291 Pfam PF00892 EamA-like transporter family 17 138 4.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_d0039 3afa600aa16b52a42808fcb299d05639 291 Pfam PF00892 EamA-like transporter family 152 281 3.6E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_d0039 3afa600aa16b52a42808fcb299d05639 291 SUPERFAMILY SSF103481 44 141 3.53E-8 T 14-10-2018 TMO_d0039 3afa600aa16b52a42808fcb299d05639 291 SUPERFAMILY SSF103481 188 284 1.7E-9 T 14-10-2018 TMO_3477 3bc472ceabbb01a4f329e5146a25bfaa 307 SUPERFAMILY SSF103481 58 160 6.8E-11 T 14-10-2018 TMO_3477 3bc472ceabbb01a4f329e5146a25bfaa 307 Pfam PF00892 EamA-like transporter family 169 302 8.8E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3477 3bc472ceabbb01a4f329e5146a25bfaa 307 Pfam PF00892 EamA-like transporter family 27 157 1.8E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3477 3bc472ceabbb01a4f329e5146a25bfaa 307 SUPERFAMILY SSF103481 207 306 2.48E-12 T 14-10-2018 TMO_c0470 ae6dec7566f3af1f9ce7dde41854bba7 48 SUPERFAMILY SSF53613 1 44 2.03E-8 T 14-10-2018 IPR029056 Ribokinase-like TMO_c0470 ae6dec7566f3af1f9ce7dde41854bba7 48 Pfam PF00294 pfkB family carbohydrate kinase 1 43 4.0E-6 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB TMO_c0470 ae6dec7566f3af1f9ce7dde41854bba7 48 Gene3D G3DSA:3.40.1190.20 1 45 7.9E-8 T 14-10-2018 IPR029056 Ribokinase-like TMO_3349 3fae5d9624f3afd762f04491fc1d915b 186 PIRSF PIRSF039093 6 186 5.6E-83 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TMO_3349 3fae5d9624f3afd762f04491fc1d915b 186 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 12 183 39.536 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TMO_3349 3fae5d9624f3afd762f04491fc1d915b 186 SUPERFAMILY SSF56235 9 183 5.7E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_3349 3fae5d9624f3afd762f04491fc1d915b 186 Gene3D G3DSA:3.60.20.10 8 184 2.5E-69 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_3349 3fae5d9624f3afd762f04491fc1d915b 186 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 13 183 1.6E-82 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TMO_3349 3fae5d9624f3afd762f04491fc1d915b 186 Pfam PF00227 Proteasome subunit 11 181 1.8E-22 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 TMO_0104 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 Gene3D G3DSA:1.10.10.10 1 139 7.8E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0104 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 SUPERFAMILY SSF46785 4 133 7.98E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0104 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 1.9E-40 T 14-10-2018 IPR014290 SUF system FeS cluster assembly regulator TMO_0104 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 Pfam PF02082 Transcriptional regulator 3 82 1.7E-20 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type TMO_0104 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site TMO_0104 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 131 3.8E-31 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 Gene3D G3DSA:1.20.140.160 136 284 3.3E-18 T 14-10-2018 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 74 87 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 SUPERFAMILY SSF88659 191 284 2.62E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 251 277 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 Pfam PF04542 Sigma-70 region 2 50 118 7.2E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 PIRSF PIRSF000770 9 297 6.0E-40 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 Pfam PF04545 Sigma-70, region 4 228 278 1.4E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 SUPERFAMILY SSF88946 13 118 2.22E-38 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 Gene3D G3DSA:1.20.120.1810 3 118 6.1E-32 T 14-10-2018 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 46 279 1.6E-34 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 PRINTS PR00046 Major sigma-70 factor signature 232 244 3.2E-23 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 PRINTS PR00046 Major sigma-70 factor signature 98 106 3.2E-23 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 PRINTS PR00046 Major sigma-70 factor signature 266 277 3.2E-23 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 PRINTS PR00046 Major sigma-70 factor signature 251 266 3.2E-23 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_3053 ea8961a5bda145d0d86ea3e16de8a9b2 299 PRINTS PR00046 Major sigma-70 factor signature 74 87 3.2E-23 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0142 a7cbe3a0ab929e3fc51acc1a0d613b7f 362 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 1 351 31.273 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 TMO_0142 a7cbe3a0ab929e3fc51acc1a0d613b7f 362 PIRSF PIRSF000443 1 361 7.6E-144 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 TMO_0142 a7cbe3a0ab929e3fc51acc1a0d613b7f 362 Gene3D G3DSA:3.40.50.1820 3 338 2.3E-140 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0142 a7cbe3a0ab929e3fc51acc1a0d613b7f 362 SUPERFAMILY SSF53474 2 352 4.54E-102 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0142 a7cbe3a0ab929e3fc51acc1a0d613b7f 362 Gene3D G3DSA:1.10.1740.110 163 269 2.3E-140 T 14-10-2018 TMO_0142 a7cbe3a0ab929e3fc51acc1a0d613b7f 362 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 2 350 3.8E-143 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 TMO_0142 a7cbe3a0ab929e3fc51acc1a0d613b7f 362 Pfam PF00561 alpha/beta hydrolase fold 28 338 2.9E-31 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 SUPERFAMILY SSF82714 699 784 2.09E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_3520 f0944b256b2e66113818d7bde8787863 1029 Gene3D G3DSA:3.30.2090.10 698 786 2.4E-279 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_3520 f0944b256b2e66113818d7bde8787863 1029 Gene3D G3DSA:3.30.70.1430 40 794 2.4E-279 T 14-10-2018 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 SUPERFAMILY SSF82866 296 488 9.68E-49 T 14-10-2018 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 Gene3D G3DSA:3.30.2090.10 178 268 2.4E-279 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_3520 f0944b256b2e66113818d7bde8787863 1029 SUPERFAMILY SSF82693 137 321 2.09E-17 T 14-10-2018 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 SUPERFAMILY SSF82693 553 650 6.1E-14 T 14-10-2018 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 SUPERFAMILY SSF82866 784 1005 8.24E-44 T 14-10-2018 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 Gene3D G3DSA:3.30.70.1430 555 647 2.4E-279 T 14-10-2018 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 Gene3D G3DSA:3.30.70.1440 648 842 2.4E-279 T 14-10-2018 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 1.1E-263 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 SUPERFAMILY SSF82693 43 131 5.93E-23 T 14-10-2018 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 Gene3D G3DSA:1.20.1640.10 501 1000 2.4E-279 T 14-10-2018 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 Gene3D G3DSA:1.20.1640.10 10 500 2.4E-279 T 14-10-2018 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.0E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.0E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.0E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.0E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.0E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.0E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.0E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 Gene3D G3DSA:3.30.70.1320 134 325 2.4E-279 T 14-10-2018 TMO_3520 f0944b256b2e66113818d7bde8787863 1029 SUPERFAMILY SSF82714 183 264 4.19E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_0607 ac117e38d99285cb731e221cbb89cf1f 160 Gene3D G3DSA:3.30.70.920 62 156 3.1E-25 T 14-10-2018 TMO_0607 ac117e38d99285cb731e221cbb89cf1f 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 57 4.4E-20 T 14-10-2018 TMO_0607 ac117e38d99285cb731e221cbb89cf1f 160 SUPERFAMILY SSF54909 72 159 2.68E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_0607 ac117e38d99285cb731e221cbb89cf1f 160 SUPERFAMILY SSF46785 10 68 1.72E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0607 ac117e38d99285cb731e221cbb89cf1f 160 Pfam PF01037 Lrp/AsnC ligand binding domain 76 150 1.1E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_0607 ac117e38d99285cb731e221cbb89cf1f 160 SMART SM00344 10 119 2.9E-47 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_0607 ac117e38d99285cb731e221cbb89cf1f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 9.3E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_0607 ac117e38d99285cb731e221cbb89cf1f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 9.3E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_0607 ac117e38d99285cb731e221cbb89cf1f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 9.3E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_0607 ac117e38d99285cb731e221cbb89cf1f 160 Gene3D G3DSA:1.10.10.10 2 61 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0084 19843874f0fc6fc3530c94673ede9232 613 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 612 7.3E-189 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like TMO_a0084 19843874f0fc6fc3530c94673ede9232 613 Pfam PF05947 Type VI secretion system, TssF 6 611 7.2E-206 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like TMO_a0084 19843874f0fc6fc3530c94673ede9232 613 PIRSF PIRSF028304 1 613 2.7E-167 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like TMO_3319 eb0cb6892ca0f503ccb05093f1630264 114 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 76 5.1E-14 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain TMO_3319 eb0cb6892ca0f503ccb05093f1630264 114 Gene3D G3DSA:3.30.70.100 1 93 4.2E-19 T 14-10-2018 TMO_3319 eb0cb6892ca0f503ccb05093f1630264 114 SUPERFAMILY SSF54909 1 99 8.59E-23 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_0038 c56bf05d47ff343dd79322a423e46476 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 247 3.3E-36 T 14-10-2018 TMO_0038 c56bf05d47ff343dd79322a423e46476 248 SUPERFAMILY SSF51735 9 247 1.89E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0038 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0038 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0038 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0038 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0038 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0038 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0038 c56bf05d47ff343dd79322a423e46476 248 Gene3D G3DSA:3.40.50.720 9 247 2.4E-53 T 14-10-2018 TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 234 3.2E-15 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 SUPERFAMILY SSF109998 249 435 1.15E-45 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 Gene3D G3DSA:3.30.70.1050 1 115 4.5E-38 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 2.9E-42 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 TIGRFAM TIGR00115 tig: trigger factor 11 418 7.4E-137 T 14-10-2018 IPR005215 Trigger factor GO:0015031 TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 PIRSF PIRSF003095 1 440 1.6E-134 T 14-10-2018 IPR005215 Trigger factor GO:0015031 TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 SUPERFAMILY SSF54534 88 242 1.37E-37 T 14-10-2018 TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 Gene3D G3DSA:1.10.3120.10 116 423 1.9E-91 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 Gene3D G3DSA:3.10.50.40 150 247 1.9E-91 T 14-10-2018 TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 SUPERFAMILY SSF102735 1 129 1.31E-38 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 418 1.2E-41 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 TMO_1984 c08e893e60aa5e6879ed1a054c22d708 452 Hamap MF_00303 Trigger factor [tig]. 1 424 22.609 T 14-10-2018 IPR005215 Trigger factor GO:0015031 TMO_2786 b55d48e0194f14c6ac3929426143ce50 793 SUPERFAMILY SSF103473 387 784 1.7E-41 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2786 b55d48e0194f14c6ac3929426143ce50 793 Pfam PF07690 Major Facilitator Superfamily 387 710 6.8E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_2786 b55d48e0194f14c6ac3929426143ce50 793 Gene3D G3DSA:1.20.1250.20 594 785 2.0E-19 T 14-10-2018 TMO_2786 b55d48e0194f14c6ac3929426143ce50 793 Gene3D G3DSA:1.20.1250.20 385 566 3.8E-13 T 14-10-2018 TMO_2182 6f5a9fb994b3e3adc39a0fdeb742556f 124 Pfam PF01638 HxlR-like helix-turn-helix 22 110 1.2E-29 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type TMO_2182 6f5a9fb994b3e3adc39a0fdeb742556f 124 Gene3D G3DSA:1.10.10.10 4 120 1.0E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2182 6f5a9fb994b3e3adc39a0fdeb742556f 124 SUPERFAMILY SSF46785 11 113 9.89E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2738 d47cf5807476f98baf8f6105f4771f96 201 SMART SM00421 138 195 6.7E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_2738 d47cf5807476f98baf8f6105f4771f96 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 1.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_2738 d47cf5807476f98baf8f6105f4771f96 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 155 182 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_2738 d47cf5807476f98baf8f6105f4771f96 201 SUPERFAMILY SSF46894 131 201 1.53E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_2738 d47cf5807476f98baf8f6105f4771f96 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 6.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_2738 d47cf5807476f98baf8f6105f4771f96 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 6.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_2738 d47cf5807476f98baf8f6105f4771f96 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 6.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_2738 d47cf5807476f98baf8f6105f4771f96 201 SUPERFAMILY SSF52172 1 129 2.85E-23 T 14-10-2018 IPR011006 CheY-like superfamily TMO_2738 d47cf5807476f98baf8f6105f4771f96 201 Gene3D G3DSA:3.40.50.12740 1 201 5.9E-51 T 14-10-2018 TMO_2738 d47cf5807476f98baf8f6105f4771f96 201 Pfam PF00072 Response regulator receiver domain 4 114 3.8E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2738 d47cf5807476f98baf8f6105f4771f96 201 SMART SM00448 1 114 6.9E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1988 268281b1e61a7c3df77d6e19f6e351cc 521 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 7 213 23.298 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TMO_1988 268281b1e61a7c3df77d6e19f6e351cc 521 SUPERFAMILY SSF64153 4 250 3.01E-54 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 TMO_1988 268281b1e61a7c3df77d6e19f6e351cc 521 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 242 499 2.2E-47 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TMO_1988 268281b1e61a7c3df77d6e19f6e351cc 521 SUPERFAMILY SSF53613 225 501 1.08E-53 T 14-10-2018 IPR029056 Ribokinase-like TMO_1988 268281b1e61a7c3df77d6e19f6e351cc 521 Pfam PF03853 YjeF-related protein N-terminus 27 192 8.2E-39 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TMO_1988 268281b1e61a7c3df77d6e19f6e351cc 521 PIRSF PIRSF017184 3 505 5.4E-104 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 TMO_1988 268281b1e61a7c3df77d6e19f6e351cc 521 Pfam PF01256 Carbohydrate kinase 252 486 8.4E-47 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TMO_1988 268281b1e61a7c3df77d6e19f6e351cc 521 Gene3D G3DSA:3.40.1190.20 229 509 4.1E-68 T 14-10-2018 IPR029056 Ribokinase-like TMO_1988 268281b1e61a7c3df77d6e19f6e351cc 521 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 228 506 19.408 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TMO_1988 268281b1e61a7c3df77d6e19f6e351cc 521 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 10 213 4.1E-38 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TMO_1988 268281b1e61a7c3df77d6e19f6e351cc 521 Gene3D G3DSA:3.40.50.10260 3 220 1.1E-55 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 TMO_1723 659b24f9dde82645922a014a5a9de962 579 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 285 575 3.7E-130 T 14-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type TMO_1723 659b24f9dde82645922a014a5a9de962 579 Pfam PF02653 Branched-chain amino acid transport system / permease component 288 561 1.4E-54 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0734 fc986d861a81b00235d7f86554de0927 378 SMART SM01119 255 362 4.6E-43 T 14-10-2018 IPR026956 D-serine dehydratase-like domain TMO_c0734 fc986d861a81b00235d7f86554de0927 378 Pfam PF01168 Alanine racemase, N-terminal domain 15 240 7.9E-31 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_c0734 fc986d861a81b00235d7f86554de0927 378 Gene3D G3DSA:2.40.37.20 8 364 1.3E-124 T 14-10-2018 TMO_c0734 fc986d861a81b00235d7f86554de0927 378 Gene3D G3DSA:3.20.20.10 17 237 1.3E-124 T 14-10-2018 IPR029066 PLP-binding barrel TMO_c0734 fc986d861a81b00235d7f86554de0927 378 Pfam PF14031 Putative serine dehydratase domain 255 361 1.3E-21 T 14-10-2018 IPR026956 D-serine dehydratase-like domain TMO_c0734 fc986d861a81b00235d7f86554de0927 378 SUPERFAMILY SSF51419 15 247 4.06E-31 T 14-10-2018 IPR029066 PLP-binding barrel TMO_0166 811a33b5ea2aaa5e5f1e12ae825c438a 314 Pfam PF00448 SRP54-type protein, GTPase domain 110 310 2.4E-70 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TMO_0166 811a33b5ea2aaa5e5f1e12ae825c438a 314 SMART SM00963 15 94 3.7E-14 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TMO_0166 811a33b5ea2aaa5e5f1e12ae825c438a 314 SMART SM00962 110 311 5.1E-105 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TMO_0166 811a33b5ea2aaa5e5f1e12ae825c438a 314 SUPERFAMILY SSF47364 10 87 7.33E-19 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 TMO_0166 811a33b5ea2aaa5e5f1e12ae825c438a 314 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 39 310 1.9E-95 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TMO_0166 811a33b5ea2aaa5e5f1e12ae825c438a 314 Gene3D G3DSA:3.40.50.300 110 299 8.8E-107 T 14-10-2018 TMO_0166 811a33b5ea2aaa5e5f1e12ae825c438a 314 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 38 311 56.961 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TMO_0166 811a33b5ea2aaa5e5f1e12ae825c438a 314 Gene3D G3DSA:1.20.120.140 13 309 8.8E-107 T 14-10-2018 TMO_0166 811a33b5ea2aaa5e5f1e12ae825c438a 314 Pfam PF02881 SRP54-type protein, helical bundle domain 27 89 1.3E-7 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TMO_0166 811a33b5ea2aaa5e5f1e12ae825c438a 314 SMART SM00382 109 249 1.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0166 811a33b5ea2aaa5e5f1e12ae825c438a 314 SUPERFAMILY SSF52540 104 311 2.43E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0216 0b346eeb7788b2ede1ad1cbd42900da1 207 SUPERFAMILY SSF48498 88 193 5.82E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_c0216 0b346eeb7788b2ede1ad1cbd42900da1 207 SUPERFAMILY SSF46689 20 74 3.64E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0216 0b346eeb7788b2ede1ad1cbd42900da1 207 Gene3D G3DSA:1.10.357.10 11 199 9.1E-43 T 14-10-2018 TMO_c0216 0b346eeb7788b2ede1ad1cbd42900da1 207 Pfam PF13305 WHG domain 93 176 3.5E-18 T 14-10-2018 IPR025996 WHG domain TMO_c0216 0b346eeb7788b2ede1ad1cbd42900da1 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 62 1.5E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_3021 e752330e844f6483e0d100c1dd5c329f 204 Gene3D G3DSA:3.40.50.360 1 203 3.7E-74 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_3021 e752330e844f6483e0d100c1dd5c329f 204 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 5 201 6.9E-94 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 TMO_3021 e752330e844f6483e0d100c1dd5c329f 204 Pfam PF03358 NADPH-dependent FMN reductase 6 148 1.9E-11 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TMO_3021 e752330e844f6483e0d100c1dd5c329f 204 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 4 203 44.892 T 14-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 TMO_3021 e752330e844f6483e0d100c1dd5c329f 204 SUPERFAMILY SSF52218 4 201 5.77E-61 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_b0036 6ab618ec569af9ce220f71dac8331c46 636 Pfam PF00664 ABC transporter transmembrane region 57 329 1.6E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_b0036 6ab618ec569af9ce220f71dac8331c46 636 Pfam PF00005 ABC transporter 396 548 7.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0036 6ab618ec569af9ce220f71dac8331c46 636 ProSitePatterns PS00211 ABC transporters family signature. 520 534 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0036 6ab618ec569af9ce220f71dac8331c46 636 SUPERFAMILY SSF52540 368 618 1.94E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0036 6ab618ec569af9ce220f71dac8331c46 636 Gene3D G3DSA:1.20.1560.10 30 365 1.5E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_b0036 6ab618ec569af9ce220f71dac8331c46 636 SUPERFAMILY SSF90123 39 366 5.36E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_b0036 6ab618ec569af9ce220f71dac8331c46 636 SMART SM00382 403 594 6.9E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0036 6ab618ec569af9ce220f71dac8331c46 636 Gene3D G3DSA:3.40.50.300 373 619 6.2E-93 T 14-10-2018 TMO_0907 1afb303605b5dfab4ca41ceb8f1de6b0 459 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 43 455 1.7E-135 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 TMO_0907 1afb303605b5dfab4ca41ceb8f1de6b0 459 Gene3D G3DSA:3.40.50.10070 45 190 3.7E-41 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 TMO_0907 1afb303605b5dfab4ca41ceb8f1de6b0 459 SUPERFAMILY SSF52964 54 187 1.57E-40 T 14-10-2018 TMO_0907 1afb303605b5dfab4ca41ceb8f1de6b0 459 Pfam PF07676 WD40-like Beta Propeller Repeat 352 384 0.0055 T 14-10-2018 IPR011659 WD40-like Beta Propeller TMO_0907 1afb303605b5dfab4ca41ceb8f1de6b0 459 Pfam PF07676 WD40-like Beta Propeller Repeat 269 299 0.3 T 14-10-2018 IPR011659 WD40-like Beta Propeller TMO_0907 1afb303605b5dfab4ca41ceb8f1de6b0 459 Pfam PF07676 WD40-like Beta Propeller Repeat 405 431 0.023 T 14-10-2018 IPR011659 WD40-like Beta Propeller TMO_0907 1afb303605b5dfab4ca41ceb8f1de6b0 459 Pfam PF07676 WD40-like Beta Propeller Repeat 308 343 1.6E-10 T 14-10-2018 IPR011659 WD40-like Beta Propeller TMO_0907 1afb303605b5dfab4ca41ceb8f1de6b0 459 Pfam PF04052 TolB amino-terminal domain 49 155 1.1E-33 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 TMO_0907 1afb303605b5dfab4ca41ceb8f1de6b0 459 SUPERFAMILY SSF69304 181 455 2.48E-55 T 14-10-2018 TMO_0907 1afb303605b5dfab4ca41ceb8f1de6b0 459 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 26 454 46.941 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 TMO_0907 1afb303605b5dfab4ca41ceb8f1de6b0 459 Gene3D G3DSA:2.120.10.30 191 458 1.4E-72 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TMO_c0726 23431e48683c32734a714336be1746da 328 SUPERFAMILY SSF51430 2 317 1.17E-68 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_c0726 23431e48683c32734a714336be1746da 328 Gene3D G3DSA:3.20.20.100 2 317 1.4E-72 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_c0726 23431e48683c32734a714336be1746da 328 Pfam PF00248 Aldo/keto reductase family 16 315 3.0E-50 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 Gene3D G3DSA:3.30.70.1440 657 852 0.0 T 14-10-2018 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 SUPERFAMILY SSF82693 137 324 9.16E-24 T 14-10-2018 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 14-10-2018 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 SUPERFAMILY SSF82866 291 489 4.71E-48 T 14-10-2018 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 Gene3D G3DSA:1.20.1640.10 502 1010 0.0 T 14-10-2018 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 SUPERFAMILY SSF82693 554 657 2.09E-18 T 14-10-2018 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 SUPERFAMILY SSF82866 817 1013 6.67E-46 T 14-10-2018 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 Gene3D G3DSA:3.30.70.1430 556 656 0.0 T 14-10-2018 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 SUPERFAMILY SSF82714 707 792 4.19E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 Gene3D G3DSA:3.30.2090.10 706 795 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 4.6E-303 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 SUPERFAMILY SSF82714 182 266 8.5E-20 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 SUPERFAMILY SSF82693 40 134 2.27E-24 T 14-10-2018 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 Gene3D G3DSA:3.30.70.1430 40 803 0.0 T 14-10-2018 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 SUPERFAMILY SSF82693 658 840 7.32E-13 T 14-10-2018 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 1.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.2E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0127 dc18f3b5bf4134debee736d3e2ee6d7a 1066 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 14-10-2018 TMO_c0250 87ad880c217ba968bf6488891959210d 173 SUPERFAMILY SSF89447 3 136 3.14E-29 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily TMO_c0250 87ad880c217ba968bf6488891959210d 173 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 3 131 3.0E-10 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TMO_c0250 87ad880c217ba968bf6488891959210d 173 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 163 27.698 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TMO_c0250 87ad880c217ba968bf6488891959210d 173 Pfam PF02381 MraZ protein, putative antitoxin-like 80 137 2.0E-9 T 14-10-2018 IPR020603 MraZ domain TMO_c0250 87ad880c217ba968bf6488891959210d 173 Gene3D G3DSA:2.40.330.20 1 143 1.2E-27 T 14-10-2018 IPR038619 MraZ superfamily TMO_2761 79931931617793167a3a8975aa958fed 655 SUPERFAMILY SSF56935 50 655 6.41E-85 T 14-10-2018 TMO_2761 79931931617793167a3a8975aa958fed 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 155 4.2E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_2761 79931931617793167a3a8975aa958fed 655 Gene3D G3DSA:2.170.130.10 51 165 1.3E-25 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_2761 79931931617793167a3a8975aa958fed 655 Pfam PF00593 TonB dependent receptor 234 651 2.2E-35 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_2761 79931931617793167a3a8975aa958fed 655 Gene3D G3DSA:2.40.170.20 167 653 6.1E-52 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_2877 f9a96c08f142e0aad8dbc1b282da88ab 144 Gene3D G3DSA:3.40.140.10 1 144 2.1E-48 T 14-10-2018 TMO_2877 f9a96c08f142e0aad8dbc1b282da88ab 144 SUPERFAMILY SSF53927 1 142 3.51E-47 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TMO_2877 f9a96c08f142e0aad8dbc1b282da88ab 144 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 48 85 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TMO_2877 f9a96c08f142e0aad8dbc1b282da88ab 144 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 144 45.036 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 TMO_2877 f9a96c08f142e0aad8dbc1b282da88ab 144 Pfam PF14437 MafB19-like deaminase 1 144 1.7E-26 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 TMO_c0824 c6e2dcd8987095c838b62e6173f3ba13 447 SMART SM00878 337 442 7.2E-49 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_c0824 c6e2dcd8987095c838b62e6173f3ba13 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_c0824 c6e2dcd8987095c838b62e6173f3ba13 447 Gene3D G3DSA:3.30.470.130 2 445 1.9E-157 T 14-10-2018 TMO_c0824 c6e2dcd8987095c838b62e6173f3ba13 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_c0824 c6e2dcd8987095c838b62e6173f3ba13 447 Pfam PF02785 Biotin carboxylase C-terminal domain 337 440 1.5E-33 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_c0824 c6e2dcd8987095c838b62e6173f3ba13 447 SUPERFAMILY SSF51246 332 443 7.85E-36 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TMO_c0824 c6e2dcd8987095c838b62e6173f3ba13 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 108 3.4E-33 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_c0824 c6e2dcd8987095c838b62e6173f3ba13 447 SUPERFAMILY SSF56059 83 347 1.5E-57 T 14-10-2018 TMO_c0824 c6e2dcd8987095c838b62e6173f3ba13 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 323 9.2E-62 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_c0824 c6e2dcd8987095c838b62e6173f3ba13 447 SUPERFAMILY SSF52440 3 113 3.88E-37 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_1822 53f630217ca1a083db3a159228fac0bb 210 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 1.7E-52 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_1822 53f630217ca1a083db3a159228fac0bb 210 SUPERFAMILY SSF63380 101 203 9.35E-32 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TMO_1822 53f630217ca1a083db3a159228fac0bb 210 PIRSF PIRSF000498 1 208 1.5E-66 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_1822 53f630217ca1a083db3a159228fac0bb 210 Pfam PF00677 Lumazine binding domain 109 192 8.5E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_1822 53f630217ca1a083db3a159228fac0bb 210 Pfam PF00677 Lumazine binding domain 3 95 2.5E-19 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_1822 53f630217ca1a083db3a159228fac0bb 210 SUPERFAMILY SSF63380 1 101 1.36E-20 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TMO_1822 53f630217ca1a083db3a159228fac0bb 210 Gene3D G3DSA:2.40.30.20 110 208 3.1E-35 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1822 53f630217ca1a083db3a159228fac0bb 210 Gene3D G3DSA:2.40.30.20 1 96 9.3E-23 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1096 05a89240afa86ecb1068e50bc15f9d60 330 Pfam PF13144 Chaperone for flagella basal body P-ring formation 166 320 2.6E-31 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal TMO_1096 05a89240afa86ecb1068e50bc15f9d60 330 Gene3D G3DSA:2.30.30.760 264 324 2.7E-13 T 14-10-2018 TMO_1096 05a89240afa86ecb1068e50bc15f9d60 330 SMART SM00858 197 259 7.6E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 TMO_1096 05a89240afa86ecb1068e50bc15f9d60 330 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 189 320 4.2E-34 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 SUPERFAMILY SSF50249 66 127 2.66E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.6E-21 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 SUPERFAMILY SSF50104 4 64 2.41E-15 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 61 3.0E-18 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 SMART SM01185 68 122 2.0E-26 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 Gene3D G3DSA:2.40.50.140 65 128 1.2E-23 T 14-10-2018 TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 2.5E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 PIRSF PIRSF005901 1 187 1.7E-67 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 SMART SM00841 130 185 3.8E-27 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 Gene3D G3DSA:2.40.50.140 130 187 2.2E-20 T 14-10-2018 TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 1.5E-69 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 44.017 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 Gene3D G3DSA:2.30.30.30 3 63 8.9E-18 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 TMO_0879 53907cccb5fce20eec9c8af8fb6e4448 188 SUPERFAMILY SSF50249 130 186 1.05E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_a0317 7933ac38e24de10c2bf23f5b58209293 237 SUPERFAMILY SSF53335 33 225 1.36E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_a0317 7933ac38e24de10c2bf23f5b58209293 237 Gene3D G3DSA:3.40.50.150 42 232 9.6E-26 T 14-10-2018 TMO_a0317 7933ac38e24de10c2bf23f5b58209293 237 Pfam PF08003 Protein of unknown function (DUF1698) 43 147 6.1E-17 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like TMO_a0317 7933ac38e24de10c2bf23f5b58209293 237 TIGRFAM TIGR04290 meth_Rta_06860: methyltransferase, Rta_06860 family 10 234 1.8E-107 T 14-10-2018 IPR027554 Methyltransferase, Rta_06860 family TMO_1514 6542bbdcdb2328937725092c4c9b4c97 754 Gene3D G3DSA:3.40.50.300 504 752 4.7E-78 T 14-10-2018 TMO_1514 6542bbdcdb2328937725092c4c9b4c97 754 SMART SM00382 537 721 7.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1514 6542bbdcdb2328937725092c4c9b4c97 754 SUPERFAMILY SSF52540 502 743 1.78E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1514 6542bbdcdb2328937725092c4c9b4c97 754 TIGRFAM TIGR03796 NHLM_micro_ABC1: NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein 27 743 0.0 T 14-10-2018 IPR022514 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein TMO_1514 6542bbdcdb2328937725092c4c9b4c97 754 ProSitePatterns PS00211 ABC transporters family signature. 649 663 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1514 6542bbdcdb2328937725092c4c9b4c97 754 Gene3D G3DSA:1.20.1560.10 169 483 1.1E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_1514 6542bbdcdb2328937725092c4c9b4c97 754 Pfam PF00664 ABC transporter transmembrane region 187 453 1.3E-19 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_1514 6542bbdcdb2328937725092c4c9b4c97 754 Gene3D G3DSA:3.90.70.10 23 165 4.5E-40 T 14-10-2018 TMO_1514 6542bbdcdb2328937725092c4c9b4c97 754 Pfam PF00005 ABC transporter 529 677 3.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1514 6542bbdcdb2328937725092c4c9b4c97 754 SUPERFAMILY SSF90123 173 484 8.24E-47 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_1514 6542bbdcdb2328937725092c4c9b4c97 754 Pfam PF03412 Peptidase C39 family 28 158 9.1E-36 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TMO_c0514 aab72750f9f4eabfd37128d8c357af7d 355 Gene3D G3DSA:3.30.360.10 121 308 7.7E-69 T 14-10-2018 TMO_c0514 aab72750f9f4eabfd37128d8c357af7d 355 Gene3D G3DSA:3.40.50.720 2 343 7.7E-69 T 14-10-2018 TMO_c0514 aab72750f9f4eabfd37128d8c357af7d 355 SUPERFAMILY SSF55347 121 353 2.94E-50 T 14-10-2018 TMO_c0514 aab72750f9f4eabfd37128d8c357af7d 355 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 112 7.8E-16 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 TMO_c0514 aab72750f9f4eabfd37128d8c357af7d 355 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 120 341 1.2E-21 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 TMO_c0514 aab72750f9f4eabfd37128d8c357af7d 355 SUPERFAMILY SSF51735 1 173 1.16E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0283 edf2783342834b6c38b23838651a51f0 435 PIRSF PIRSF006066 4 435 7.7E-73 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0283 edf2783342834b6c38b23838651a51f0 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 421 1.4E-64 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_0354 6e5f55a6c02421976340b74ec0eb31bc 308 Gene3D G3DSA:1.10.4030.30 39 117 3.2E-5 T 14-10-2018 TMO_0354 6e5f55a6c02421976340b74ec0eb31bc 308 SUPERFAMILY SSF109998 39 177 3.77E-17 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily TMO_0354 6e5f55a6c02421976340b74ec0eb31bc 308 Pfam PF13616 PPIC-type PPIASE domain 145 237 1.7E-25 T 14-10-2018 TMO_0354 6e5f55a6c02421976340b74ec0eb31bc 308 SUPERFAMILY SSF54534 134 236 1.7E-34 T 14-10-2018 TMO_0354 6e5f55a6c02421976340b74ec0eb31bc 308 Gene3D G3DSA:3.10.50.40 140 270 4.7E-40 T 14-10-2018 TMO_d0030 730e457fb44130ad14543a6de68b58e7 365 Gene3D G3DSA:3.40.190.10 66 331 1.0E-45 T 14-10-2018 TMO_d0030 730e457fb44130ad14543a6de68b58e7 365 SUPERFAMILY SSF53850 54 351 2.69E-48 T 14-10-2018 TMO_d0030 730e457fb44130ad14543a6de68b58e7 365 Pfam PF13343 Bacterial extracellular solute-binding protein 117 345 5.4E-27 T 14-10-2018 TMO_d0030 730e457fb44130ad14543a6de68b58e7 365 Gene3D G3DSA:3.40.190.10 155 334 1.0E-45 T 14-10-2018 TMO_2509 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 Gene3D G3DSA:3.50.50.60 4 47 4.1E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2509 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 Gene3D G3DSA:3.30.9.10 59 272 2.3E-13 T 14-10-2018 TMO_2509 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 Pfam PF13450 NAD(P)-binding Rossmann-like domain 11 42 7.1E-5 T 14-10-2018 TMO_2509 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 SUPERFAMILY SSF51905 6 314 3.37E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2509 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 Pfam PF01266 FAD dependent oxidoreductase 61 310 2.3E-11 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_2509 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 Gene3D G3DSA:3.50.50.60 90 312 2.3E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_d0046 774d8c48d09bce1c280ca518ec4ebfe6 389 SUPERFAMILY SSF51905 1 369 1.42E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_d0046 774d8c48d09bce1c280ca518ec4ebfe6 389 Gene3D G3DSA:3.50.50.60 1 344 2.2E-67 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_d0046 774d8c48d09bce1c280ca518ec4ebfe6 389 Gene3D G3DSA:3.30.9.10 86 308 2.2E-67 T 14-10-2018 TMO_d0046 774d8c48d09bce1c280ca518ec4ebfe6 389 Pfam PF01266 FAD dependent oxidoreductase 1 343 2.9E-48 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_a0017 474235558174261d4790c692d957bfb4 272 Gene3D G3DSA:1.10.10.10 2 74 2.1E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0017 474235558174261d4790c692d957bfb4 272 Gene3D G3DSA:3.30.450.40 77 243 2.3E-20 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_a0017 474235558174261d4790c692d957bfb4 272 Pfam PF09339 IclR helix-turn-helix domain 8 57 2.9E-9 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_a0017 474235558174261d4790c692d957bfb4 272 SUPERFAMILY SSF55781 70 245 1.18E-26 T 14-10-2018 TMO_a0017 474235558174261d4790c692d957bfb4 272 SUPERFAMILY SSF46785 7 76 4.18E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0017 474235558174261d4790c692d957bfb4 272 SMART SM00346 4 89 0.0093 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_a0017 474235558174261d4790c692d957bfb4 272 Pfam PF01614 Bacterial transcriptional regulator 125 242 3.0E-8 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 SUPERFAMILY SSF47384 177 258 1.59E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 SMART SM00388 188 257 5.6E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 SUPERFAMILY SSF55874 246 421 1.44E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 Gene3D G3DSA:3.30.565.10 259 420 3.5E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 417 9.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 9.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 373 9.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 359 9.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 Gene3D G3DSA:1.10.287.130 172 258 1.6E-25 T 14-10-2018 TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 SUPERFAMILY SSF55785 11 91 2.62E-10 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 Gene3D G3DSA:3.30.450.20 9 146 3.2E-11 T 14-10-2018 TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 Pfam PF12860 PAS fold 26 144 2.1E-12 T 14-10-2018 TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 257 4.7E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 303 418 3.3E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0802 3e07fe08b20ee441c82fb84ecafe888c 430 SMART SM00387 303 420 3.6E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 Gene3D G3DSA:3.40.50.10860 9 284 3.3E-107 T 14-10-2018 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 Hamap MF_01576 Bifunctional protein FolD [folD]. 4 291 38.863 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 122 2.9E-39 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 SUPERFAMILY SSF53223 4 123 1.63E-39 T 14-10-2018 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 35 57 1.4E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 157 177 1.4E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 264 282 1.4E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 247 263 1.4E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 206 235 1.4E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 76 103 1.4E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 111 132 1.4E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 Gene3D G3DSA:3.40.50.720 7 267 3.3E-107 T 14-10-2018 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 268 276 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 SUPERFAMILY SSF51735 124 288 1.03E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3100 e5ffc5a0eb560afd3054450dba0389ab 298 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 289 1.5E-67 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 Gene3D G3DSA:1.10.155.10 1 69 7.0E-6 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 Gene3D G3DSA:3.40.50.150 70 267 2.9E-60 T 14-10-2018 TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 Pfam PF01739 CheR methyltransferase, SAM binding domain 71 260 4.9E-60 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 SUPERFAMILY SSF47757 2 70 2.09E-13 T 14-10-2018 TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 SMART SM00138 3 267 1.0E-101 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 3.9E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 3.9E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 25 38 3.9E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 3.9E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 64 76 3.9E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 139 155 3.9E-38 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 Pfam PF03705 CheR methyltransferase, all-alpha domain 4 54 5.8E-10 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal TMO_1227 b737dc8a9768546ae67c05bd69c44431 269 SUPERFAMILY SSF53335 71 266 2.78E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1878 d927d2513fa820bcf8890150190bc37d 255 Pfam PF02674 Colicin V production protein 7 148 3.9E-30 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 TMO_0196 579fb60832bbc6601654ac86e489058e 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.063 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TMO_0196 579fb60832bbc6601654ac86e489058e 65 Pfam PF01632 Ribosomal protein L35 2 62 2.1E-22 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0196 579fb60832bbc6601654ac86e489058e 65 SUPERFAMILY SSF143034 2 64 2.49E-21 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0196 579fb60832bbc6601654ac86e489058e 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_0196 579fb60832bbc6601654ac86e489058e 65 Gene3D G3DSA:2.40.50.530 1 65 4.1E-24 T 14-10-2018 TMO_0196 579fb60832bbc6601654ac86e489058e 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 3.9E-21 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TMO_0196 579fb60832bbc6601654ac86e489058e 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 6.1E-14 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TMO_0196 579fb60832bbc6601654ac86e489058e 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.1E-14 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TMO_0196 579fb60832bbc6601654ac86e489058e 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 6.1E-14 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TMO_b0565 879de6cff19cf52279c093d92c8aeea6 197 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 147 1.2E-19 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_0418 5bf27135bc5acdbb0049961c96b7099e 118 SUPERFAMILY SSF54913 12 112 5.0E-15 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TMO_0418 5bf27135bc5acdbb0049961c96b7099e 118 Gene3D G3DSA:3.30.70.120 8 114 2.2E-29 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TMO_a0190 3862b3f84c08af4e560edf0847bd79b3 561 SUPERFAMILY SSF90123 11 330 4.05E-30 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_a0190 3862b3f84c08af4e560edf0847bd79b3 561 Pfam PF00005 ABC transporter 359 492 1.8E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0190 3862b3f84c08af4e560edf0847bd79b3 561 SUPERFAMILY SSF52540 335 541 5.33E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0190 3862b3f84c08af4e560edf0847bd79b3 561 Gene3D G3DSA:3.40.50.300 337 555 2.0E-52 T 14-10-2018 TMO_a0190 3862b3f84c08af4e560edf0847bd79b3 561 SMART SM00382 367 539 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0190 3862b3f84c08af4e560edf0847bd79b3 561 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0190 3862b3f84c08af4e560edf0847bd79b3 561 Gene3D G3DSA:1.20.1560.10 9 323 8.9E-15 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_b0296 6b84ccebd358f5d3db90343ac48a2243 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_b0296 6b84ccebd358f5d3db90343ac48a2243 265 SUPERFAMILY SSF52096 1 265 2.05E-85 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_b0296 6b84ccebd358f5d3db90343ac48a2243 265 Gene3D G3DSA:3.90.226.10 1 205 1.7E-66 T 14-10-2018 TMO_b0296 6b84ccebd358f5d3db90343ac48a2243 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 264 5.1E-61 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_b0296 6b84ccebd358f5d3db90343ac48a2243 265 Gene3D G3DSA:1.10.12.10 208 264 5.8E-15 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_3022 4adbfbbfe90196397835432d22ab92f8 304 Gene3D G3DSA:1.10.10.10 3 92 1.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3022 4adbfbbfe90196397835432d22ab92f8 304 Pfam PF03466 LysR substrate binding domain 88 294 3.3E-50 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_3022 4adbfbbfe90196397835432d22ab92f8 304 Gene3D G3DSA:3.40.190.10 163 265 1.5E-74 T 14-10-2018 TMO_3022 4adbfbbfe90196397835432d22ab92f8 304 Gene3D G3DSA:3.40.190.10 93 291 1.5E-74 T 14-10-2018 TMO_3022 4adbfbbfe90196397835432d22ab92f8 304 SUPERFAMILY SSF53850 88 298 9.05E-51 T 14-10-2018 TMO_3022 4adbfbbfe90196397835432d22ab92f8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3022 4adbfbbfe90196397835432d22ab92f8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3022 4adbfbbfe90196397835432d22ab92f8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3022 4adbfbbfe90196397835432d22ab92f8 304 SUPERFAMILY SSF46785 4 111 4.63E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3022 4adbfbbfe90196397835432d22ab92f8 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1368 b62f8ce813a036526ec0b25425ae0d9a 377 PIRSF PIRSF028101 1 377 3.8E-88 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 TMO_1368 b62f8ce813a036526ec0b25425ae0d9a 377 SUPERFAMILY SSF50969 57 348 1.53E-19 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TMO_1368 b62f8ce813a036526ec0b25425ae0d9a 377 Gene3D G3DSA:2.130.10.10 55 252 1.7E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TMO_1368 b62f8ce813a036526ec0b25425ae0d9a 377 Pfam PF07433 Protein of unknown function (DUF1513) 66 375 8.8E-100 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 TMO_0124 5ff5d4c3be9b7b8dc6876445cfdea84f 310 SMART SM00893 3 181 4.0E-54 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TMO_0124 5ff5d4c3be9b7b8dc6876445cfdea84f 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 TMO_0124 5ff5d4c3be9b7b8dc6876445cfdea84f 310 Pfam PF01012 Electron transfer flavoprotein domain 3 168 3.3E-38 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TMO_0124 5ff5d4c3be9b7b8dc6876445cfdea84f 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 8.0E-37 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 TMO_0124 5ff5d4c3be9b7b8dc6876445cfdea84f 310 PIRSF PIRSF000089 1 310 5.6E-108 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 TMO_0124 5ff5d4c3be9b7b8dc6876445cfdea84f 310 Gene3D G3DSA:3.40.50.1220 183 310 1.2E-59 T 14-10-2018 TMO_0124 5ff5d4c3be9b7b8dc6876445cfdea84f 310 Gene3D G3DSA:3.40.50.620 2 182 2.0E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_0124 5ff5d4c3be9b7b8dc6876445cfdea84f 310 SUPERFAMILY SSF52402 3 182 5.37E-53 T 14-10-2018 TMO_0124 5ff5d4c3be9b7b8dc6876445cfdea84f 310 SUPERFAMILY SSF52467 186 308 2.59E-50 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_3266 1e1290adc9f9d38b11882ecd0b616a59 431 PIRSF PIRSF006060 1 408 6.7E-47 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TMO_3266 1e1290adc9f9d38b11882ecd0b616a59 431 Pfam PF13520 Amino acid permease 12 365 1.2E-30 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TMO_3266 1e1290adc9f9d38b11882ecd0b616a59 431 Gene3D G3DSA:1.20.1740.10 7 419 8.8E-55 T 14-10-2018 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 Pfam PF16184 Cadherin-like 754 839 1.1E-6 T 14-10-2018 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SUPERFAMILY SSF49313 6 90 1.83E-8 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SMART SM00112 206 277 0.11 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SMART SM00112 689 768 0.015 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SMART SM00112 298 376 0.18 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SMART SM00112 397 478 2.4E-6 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SMART SM00112 499 572 7.7E-5 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SMART SM00112 593 670 1.2E-5 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SMART SM00112 19 92 2.3E-8 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SMART SM00112 113 185 3.2E-6 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 Gene3D G3DSA:2.60.40.60 677 764 7.8E-5 T 14-10-2018 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SUPERFAMILY SSF49313 580 664 6.02E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SUPERFAMILY SSF49313 198 271 9.68E-5 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 Gene3D G3DSA:2.60.40.60 480 571 8.5E-10 T 14-10-2018 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 Gene3D G3DSA:2.60.40.60 5 90 4.2E-10 T 14-10-2018 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 PRINTS PR00205 Cadherin signature 553 572 6.1E-5 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 PRINTS PR00205 Cadherin signature 91 120 6.1E-5 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 PRINTS PR00205 Cadherin signature 248 260 6.1E-5 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 PRINTS PR00205 Cadherin signature 656 673 6.1E-5 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 Gene3D G3DSA:2.60.40.60 91 180 3.3E-8 T 14-10-2018 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 Gene3D G3DSA:2.60.40.60 191 273 1.8E-5 T 14-10-2018 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 Gene3D G3DSA:2.60.40.60 573 665 1.5E-7 T 14-10-2018 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 Gene3D G3DSA:2.60.40.60 377 476 1.8E-8 T 14-10-2018 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SUPERFAMILY SSF49313 678 766 2.57E-5 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SUPERFAMILY SSF49313 382 473 2.0E-8 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SUPERFAMILY SSF49313 100 178 1.44E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_c0894 35e6450cae6bd1895ec4a30ce3f17d83 1123 SUPERFAMILY SSF49313 485 567 2.09E-8 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 TMO_a0203 3985ef5ca7f79d8eb1d9be3e301acdf4 143 Pfam PF01850 PIN domain 4 133 3.0E-15 T 14-10-2018 IPR002716 PIN domain TMO_a0203 3985ef5ca7f79d8eb1d9be3e301acdf4 143 SUPERFAMILY SSF88723 2 134 8.41E-28 T 14-10-2018 IPR029060 PIN-like domain superfamily TMO_a0203 3985ef5ca7f79d8eb1d9be3e301acdf4 143 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 140 10.637 T 14-10-2018 IPR022907 VapC family GO:0004540 TMO_a0203 3985ef5ca7f79d8eb1d9be3e301acdf4 143 Gene3D G3DSA:3.40.50.1010 4 138 3.9E-35 T 14-10-2018 TMO_3316 853a80fe77a074bba6fef537cc35e89d 512 SUPERFAMILY SSF109604 347 480 1.13E-6 T 14-10-2018 TMO_3316 853a80fe77a074bba6fef537cc35e89d 512 Gene3D G3DSA:3.30.420.40 17 131 1.6E-33 T 14-10-2018 TMO_3316 853a80fe77a074bba6fef537cc35e89d 512 Gene3D G3DSA:3.30.420.150 132 315 1.7E-44 T 14-10-2018 TMO_3316 853a80fe77a074bba6fef537cc35e89d 512 Pfam PF02541 Ppx/GppA phosphatase family 47 318 1.6E-46 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 TMO_3316 853a80fe77a074bba6fef537cc35e89d 512 Gene3D G3DSA:1.10.3210.10 317 510 1.5E-53 T 14-10-2018 TMO_3316 853a80fe77a074bba6fef537cc35e89d 512 SUPERFAMILY SSF53067 150 319 2.59E-31 T 14-10-2018 TMO_3316 853a80fe77a074bba6fef537cc35e89d 512 SUPERFAMILY SSF53067 26 147 1.3E-31 T 14-10-2018 TMO_1942 b98f9b117f6103c84e469a11752e2e0a 325 PIRSF PIRSF004532 6 325 2.9E-139 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 TMO_1942 b98f9b117f6103c84e469a11752e2e0a 325 Gene3D G3DSA:3.30.540.10 12 316 1.9E-128 T 14-10-2018 TMO_1942 b98f9b117f6103c84e469a11752e2e0a 325 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 6 320 1.3E-113 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 TMO_1942 b98f9b117f6103c84e469a11752e2e0a 325 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 8 316 6.0E-139 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 TMO_1942 b98f9b117f6103c84e469a11752e2e0a 325 Gene3D G3DSA:3.40.190.90 127 289 1.9E-128 T 14-10-2018 TMO_1942 b98f9b117f6103c84e469a11752e2e0a 325 SUPERFAMILY SSF56655 5 318 1.56E-106 T 14-10-2018 TMO_a0509 ebe85203fe194fd1201c6e89563f3048 526 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_a0509 ebe85203fe194fd1201c6e89563f3048 526 Pfam PF00501 AMP-binding enzyme 23 424 6.0E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0509 ebe85203fe194fd1201c6e89563f3048 526 SUPERFAMILY SSF56801 13 521 1.7E-139 T 14-10-2018 TMO_a0509 ebe85203fe194fd1201c6e89563f3048 526 Gene3D G3DSA:3.40.50.12780 8 417 2.7E-99 T 14-10-2018 TMO_a0509 ebe85203fe194fd1201c6e89563f3048 526 Gene3D G3DSA:3.30.300.310 420 525 2.6E-34 T 14-10-2018 TMO_a0509 ebe85203fe194fd1201c6e89563f3048 526 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 509 2.7E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_1766 75a3fd7a6600d8721fb42aca6bb2e545 211 Gene3D G3DSA:3.40.190.10 1 206 1.1E-71 T 14-10-2018 TMO_1766 75a3fd7a6600d8721fb42aca6bb2e545 211 SUPERFAMILY SSF53850 1 211 1.03E-59 T 14-10-2018 TMO_1766 75a3fd7a6600d8721fb42aca6bb2e545 211 Gene3D G3DSA:3.40.190.10 57 162 1.1E-71 T 14-10-2018 TMO_1766 75a3fd7a6600d8721fb42aca6bb2e545 211 Pfam PF03180 NLPA lipoprotein 1 211 2.2E-67 T 14-10-2018 IPR004872 Lipoprotein NlpA family TMO_b0069 1dd5a520770dbee8c90c18cb8dc037c8 102 Gene3D G3DSA:3.40.630.30 1 99 2.6E-24 T 14-10-2018 TMO_b0069 1dd5a520770dbee8c90c18cb8dc037c8 102 Pfam PF00583 Acetyltransferase (GNAT) family 4 79 1.3E-14 T 14-10-2018 IPR000182 GNAT domain TMO_b0069 1dd5a520770dbee8c90c18cb8dc037c8 102 SUPERFAMILY SSF55729 3 88 5.15E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_0258 495031ee781e217da1c9d96f374484b9 675 Gene3D G3DSA:2.40.170.20 44 675 4.3E-161 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_0258 495031ee781e217da1c9d96f374484b9 675 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 156 4.0E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_0258 495031ee781e217da1c9d96f374484b9 675 Pfam PF00593 TonB dependent receptor 265 674 3.0E-44 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_0258 495031ee781e217da1c9d96f374484b9 675 SUPERFAMILY SSF56935 33 675 2.02E-105 T 14-10-2018 TMO_a0174 1d2547fd9c8f4cc9b8e79fcdd3338f08 346 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 52 324 7.5E-38 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_a0174 1d2547fd9c8f4cc9b8e79fcdd3338f08 346 Gene3D G3DSA:3.40.190.170 38 346 2.7E-58 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_b0226 9e5348c881391283709b5d88aefb7c67 311 Pfam PF12833 Helix-turn-helix domain 227 304 1.8E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0226 9e5348c881391283709b5d88aefb7c67 311 Gene3D G3DSA:1.10.10.60 203 308 2.5E-25 T 14-10-2018 TMO_b0226 9e5348c881391283709b5d88aefb7c67 311 SMART SM00342 221 304 4.0E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0226 9e5348c881391283709b5d88aefb7c67 311 SUPERFAMILY SSF46689 204 255 6.95E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0226 9e5348c881391283709b5d88aefb7c67 311 SUPERFAMILY SSF46689 257 307 2.15E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0226 9e5348c881391283709b5d88aefb7c67 311 Pfam PF12852 Cupin 2 183 2.3E-38 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 SUPERFAMILY SSF54713 149 305 2.22E-45 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Hamap MF_00050 Elongation factor Ts [tsf]. 1 305 78.017 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Gene3D G3DSA:3.30.479.20 149 287 1.5E-42 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Pfam PF00889 Elongation factor TS 71 288 5.9E-69 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Gene3D G3DSA:1.10.8.10 1 56 3.9E-28 T 14-10-2018 TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Gene3D G3DSA:1.10.286.20 202 246 1.5E-42 T 14-10-2018 TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 304 1.6E-96 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 SUPERFAMILY SSF46934 4 55 1.07E-19 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Gene3D G3DSA:3.30.479.20 57 147 4.2E-24 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TMO_1781 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 SUPERFAMILY SSF54713 56 146 7.41E-20 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TMO_1297 1c4d57b71ffc9c7281b3d1b21c77ff92 379 Pfam PF11017 Protein of unknown function (DUF2855) 42 362 6.1E-104 T 14-10-2018 IPR021276 Protein of unknown function DUF2855 TMO_c0282 d7e729bc5938e0c097e059f429b0b4d6 437 SMART SM00345 12 71 2.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0282 d7e729bc5938e0c097e059f429b0b4d6 437 Gene3D G3DSA:1.10.10.10 10 82 4.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0282 d7e729bc5938e0c097e059f429b0b4d6 437 Gene3D G3DSA:3.90.1150.10 116 417 2.0E-47 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0282 d7e729bc5938e0c097e059f429b0b4d6 437 SUPERFAMILY SSF53383 76 429 1.87E-57 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0282 d7e729bc5938e0c097e059f429b0b4d6 437 SUPERFAMILY SSF46785 10 79 2.72E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0282 d7e729bc5938e0c097e059f429b0b4d6 437 Gene3D G3DSA:3.40.640.10 117 333 2.0E-47 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0282 d7e729bc5938e0c097e059f429b0b4d6 437 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0282 d7e729bc5938e0c097e059f429b0b4d6 437 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0282 d7e729bc5938e0c097e059f429b0b4d6 437 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 2.2E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0282 d7e729bc5938e0c097e059f429b0b4d6 437 Pfam PF00155 Aminotransferase class I and II 144 425 2.8E-16 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_a0147 d8e7f356aa23e1b3d5b2cfcfc9c50d4b 209 Gene3D G3DSA:3.40.225.10 6 207 1.1E-47 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_a0147 d8e7f356aa23e1b3d5b2cfcfc9c50d4b 209 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 199 1.8E-37 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_a0147 d8e7f356aa23e1b3d5b2cfcfc9c50d4b 209 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 14 206 2.3E-53 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 TMO_a0147 d8e7f356aa23e1b3d5b2cfcfc9c50d4b 209 SMART SM01007 11 202 1.2E-42 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_a0147 d8e7f356aa23e1b3d5b2cfcfc9c50d4b 209 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 209 86.21 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 TMO_a0147 d8e7f356aa23e1b3d5b2cfcfc9c50d4b 209 SUPERFAMILY SSF53639 8 205 6.87E-36 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_1225 e887683c20e279406d6e81b93308ed6d 121 Gene3D G3DSA:3.40.50.12740 2 118 1.3E-34 T 14-10-2018 TMO_1225 e887683c20e279406d6e81b93308ed6d 121 SUPERFAMILY SSF52172 1 116 2.13E-35 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1225 e887683c20e279406d6e81b93308ed6d 121 SMART SM00448 2 115 5.2E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1225 e887683c20e279406d6e81b93308ed6d 121 Pfam PF00072 Response regulator receiver domain 5 113 4.7E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0394 a21780af0d47c28d09f881ecfad622b8 470 SMART SM00345 13 72 1.6E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0394 a21780af0d47c28d09f881ecfad622b8 470 SUPERFAMILY SSF53383 97 468 2.95E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0394 a21780af0d47c28d09f881ecfad622b8 470 Gene3D G3DSA:1.10.10.10 8 104 4.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0394 a21780af0d47c28d09f881ecfad622b8 470 Gene3D G3DSA:3.40.640.10 107 462 2.8E-111 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0394 a21780af0d47c28d09f881ecfad622b8 470 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0394 a21780af0d47c28d09f881ecfad622b8 470 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0394 a21780af0d47c28d09f881ecfad622b8 470 Pfam PF00155 Aminotransferase class I and II 124 404 9.1E-21 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_c0394 a21780af0d47c28d09f881ecfad622b8 470 SUPERFAMILY SSF46785 7 74 4.45E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0394 a21780af0d47c28d09f881ecfad622b8 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 1.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0546 131f022229ad5b5f2e47afdcadf415f0 217 SUPERFAMILY SSF52016 7 202 6.67E-45 T 14-10-2018 TMO_b0546 131f022229ad5b5f2e47afdcadf415f0 217 Gene3D G3DSA:3.20.19.10 1 184 4.6E-59 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 TMO_b0546 131f022229ad5b5f2e47afdcadf415f0 217 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 7 196 8.3E-56 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 TMO_b0546 131f022229ad5b5f2e47afdcadf415f0 217 Pfam PF00694 Aconitase C-terminal domain 54 128 3.8E-20 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 TMO_b0546 131f022229ad5b5f2e47afdcadf415f0 217 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 6 210 33.562 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 TMO_c0505 e3bb698d4ab5d869215b2704cd011289 399 Pfam PF07687 Peptidase dimerisation domain 197 292 1.3E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain TMO_c0505 e3bb698d4ab5d869215b2704cd011289 399 Pfam PF01546 Peptidase family M20/M25/M40 83 394 9.1E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 TMO_c0505 e3bb698d4ab5d869215b2704cd011289 399 SUPERFAMILY SSF53187 15 397 4.79E-84 T 14-10-2018 TMO_c0505 e3bb698d4ab5d869215b2704cd011289 399 Gene3D G3DSA:3.30.70.360 192 306 1.2E-133 T 14-10-2018 TMO_c0505 e3bb698d4ab5d869215b2704cd011289 399 SUPERFAMILY SSF55031 192 310 3.27E-31 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TMO_c0505 e3bb698d4ab5d869215b2704cd011289 399 PIRSF PIRSF005962 11 399 1.3E-126 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 TMO_c0505 e3bb698d4ab5d869215b2704cd011289 399 Gene3D G3DSA:3.40.630.10 26 381 1.2E-133 T 14-10-2018 TMO_c0505 e3bb698d4ab5d869215b2704cd011289 399 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 24 384 8.1E-107 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 TMO_2980 3fc2d432e33e004d87734d021cb0762e 253 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 24 232 5.2E-60 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 TMO_2980 3fc2d432e33e004d87734d021cb0762e 253 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 236 7.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2980 3fc2d432e33e004d87734d021cb0762e 253 Gene3D G3DSA:1.10.3720.10 6 237 1.2E-50 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2980 3fc2d432e33e004d87734d021cb0762e 253 SUPERFAMILY SSF161098 3 230 4.71E-45 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0143 dcc6060ff2aeca573f3ad06dd30e35fd 57 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 56 5.0E-5 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_1038 2a851910c607ac3746280b592aeb7079 167 SUPERFAMILY SSF51182 12 158 5.79E-51 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_1038 2a851910c607ac3746280b592aeb7079 167 Gene3D G3DSA:2.60.120.10 12 165 4.6E-51 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_1038 2a851910c607ac3746280b592aeb7079 167 Pfam PF06172 Cupin superfamily (DUF985) 19 151 4.3E-42 T 14-10-2018 IPR009327 Cupin domain of unknown function DUF985 TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 Gene3D G3DSA:3.30.70.270 290 453 1.0E-45 T 14-10-2018 TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 447 7.4E-34 T 14-10-2018 IPR000160 GGDEF domain TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 SMART SM00267 283 451 1.3E-47 T 14-10-2018 IPR000160 GGDEF domain TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 SUPERFAMILY SSF55781 23 162 3.02E-23 T 14-10-2018 TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 SUPERFAMILY SSF141868 466 711 6.93E-84 T 14-10-2018 IPR035919 EAL domain superfamily TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 Gene3D G3DSA:3.20.20.450 462 713 1.5E-92 T 14-10-2018 IPR035919 EAL domain superfamily TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 450 5.2E-27 T 14-10-2018 IPR000160 GGDEF domain TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 SMART SM00065 21 161 0.0012 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 Gene3D G3DSA:3.30.450.20 177 289 1.8E-23 T 14-10-2018 TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 Pfam PF00563 EAL domain 467 701 5.1E-69 T 14-10-2018 IPR001633 EAL domain TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 SMART SM00052 461 706 1.4E-108 T 14-10-2018 IPR001633 EAL domain TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 SMART SM00091 168 234 3.1E-11 T 14-10-2018 IPR000014 PAS domain TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 SUPERFAMILY SSF55073 299 453 5.02E-40 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 SUPERFAMILY SSF55785 179 290 1.93E-20 T 14-10-2018 IPR035965 PAS domain superfamily TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 Gene3D G3DSA:3.30.450.40 10 165 2.2E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 Pfam PF00989 PAS fold 169 280 2.2E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 167 290 8.0E-20 T 14-10-2018 IPR000014 PAS domain TMO_a0053 c7fbae8e22717c8bc567c10339b0450b 729 Pfam PF01590 GAF domain 23 150 7.3E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_1063 cbecb6bd1930106acb91b62af196b732 673 Gene3D G3DSA:2.150.10.10 449 585 2.3E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1063 cbecb6bd1930106acb91b62af196b732 673 SUPERFAMILY SSF51120 385 592 3.79E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1063 cbecb6bd1930106acb91b62af196b732 673 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 576 644 4.3E-4 T 14-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass TMO_1063 cbecb6bd1930106acb91b62af196b732 673 PRINTS PR00313 NodO calcium binding signature 493 504 1.6E-6 T 14-10-2018 TMO_1063 cbecb6bd1930106acb91b62af196b732 673 PRINTS PR00313 NodO calcium binding signature 505 513 1.6E-6 T 14-10-2018 TMO_1063 cbecb6bd1930106acb91b62af196b732 673 PRINTS PR00313 NodO calcium binding signature 532 541 1.6E-6 T 14-10-2018 TMO_1063 cbecb6bd1930106acb91b62af196b732 673 PRINTS PR00313 NodO calcium binding signature 514 522 1.6E-6 T 14-10-2018 TMO_0950 12fbcd1e80d499cbf8ee32f96edd42f5 420 SUPERFAMILY SSF54373 272 362 1.16E-13 T 14-10-2018 TMO_0950 12fbcd1e80d499cbf8ee32f96edd42f5 420 Gene3D G3DSA:3.50.50.60 100 407 2.5E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0950 12fbcd1e80d499cbf8ee32f96edd42f5 420 Gene3D G3DSA:3.30.9.10 134 364 2.5E-48 T 14-10-2018 TMO_0950 12fbcd1e80d499cbf8ee32f96edd42f5 420 Pfam PF01266 FAD dependent oxidoreductase 2 400 7.6E-66 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_0950 12fbcd1e80d499cbf8ee32f96edd42f5 420 Gene3D G3DSA:3.50.50.60 4 52 4.9E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0950 12fbcd1e80d499cbf8ee32f96edd42f5 420 SUPERFAMILY SSF51905 2 418 6.47E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3565 d377b76eeb4c4003127d46905c2cfe79 156 Gene3D G3DSA:3.40.250.10 19 156 1.1E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_3565 d377b76eeb4c4003127d46905c2cfe79 156 SMART SM00450 26 139 1.8E-8 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_3565 d377b76eeb4c4003127d46905c2cfe79 156 SUPERFAMILY SSF52821 20 155 3.4E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_3565 d377b76eeb4c4003127d46905c2cfe79 156 Pfam PF00581 Rhodanese-like domain 26 132 3.5E-8 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_a0191 8a99c0c172a5b635151c6f5a5fcc95f2 524 Gene3D G3DSA:1.20.1560.10 1 302 3.5E-28 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_a0191 8a99c0c172a5b635151c6f5a5fcc95f2 524 SUPERFAMILY SSF90123 3 307 4.45E-36 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_a0191 8a99c0c172a5b635151c6f5a5fcc95f2 524 Pfam PF00664 ABC transporter transmembrane region 3 249 4.4E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_a0191 8a99c0c172a5b635151c6f5a5fcc95f2 524 SMART SM00382 348 524 6.8E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0191 8a99c0c172a5b635151c6f5a5fcc95f2 524 Pfam PF00005 ABC transporter 342 478 2.4E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0191 8a99c0c172a5b635151c6f5a5fcc95f2 524 ProSitePatterns PS00211 ABC transporters family signature. 449 463 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0191 8a99c0c172a5b635151c6f5a5fcc95f2 524 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 2 520 7.7E-145 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 TMO_a0191 8a99c0c172a5b635151c6f5a5fcc95f2 524 Gene3D G3DSA:3.40.50.300 320 524 3.3E-49 T 14-10-2018 TMO_a0191 8a99c0c172a5b635151c6f5a5fcc95f2 524 SUPERFAMILY SSF52540 312 522 7.01E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3007 df832327284e494a33ab8b0080328665 291 Gene3D G3DSA:3.40.50.261 124 289 1.6E-73 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3007 df832327284e494a33ab8b0080328665 291 SUPERFAMILY SSF52210 123 290 1.22E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3007 df832327284e494a33ab8b0080328665 291 PIRSF PIRSF001553 1 290 5.8E-134 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TMO_3007 df832327284e494a33ab8b0080328665 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 289 4.2E-144 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TMO_3007 df832327284e494a33ab8b0080328665 291 Gene3D G3DSA:3.40.50.720 2 123 2.6E-52 T 14-10-2018 TMO_3007 df832327284e494a33ab8b0080328665 291 Pfam PF00549 CoA-ligase 151 272 1.0E-21 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3007 df832327284e494a33ab8b0080328665 291 SMART SM00881 4 100 4.6E-36 T 14-10-2018 IPR003781 CoA-binding GO:0048037 TMO_3007 df832327284e494a33ab8b0080328665 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site TMO_3007 df832327284e494a33ab8b0080328665 291 SUPERFAMILY SSF51735 1 122 1.58E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3007 df832327284e494a33ab8b0080328665 291 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 4.0E-41 T 14-10-2018 TMO_3007 df832327284e494a33ab8b0080328665 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 4.0E-41 T 14-10-2018 TMO_3007 df832327284e494a33ab8b0080328665 291 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 4.0E-41 T 14-10-2018 TMO_3007 df832327284e494a33ab8b0080328665 291 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 4.0E-41 T 14-10-2018 TMO_3007 df832327284e494a33ab8b0080328665 291 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 43.54 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TMO_3007 df832327284e494a33ab8b0080328665 291 Pfam PF02629 CoA binding domain 7 99 1.9E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 TMO_3007 df832327284e494a33ab8b0080328665 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site TMO_b0465 07bbc85117f2f380c82f2a62ebb81c3d 771 Gene3D G3DSA:1.10.3720.10 85 189 2.2E-12 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0465 07bbc85117f2f380c82f2a62ebb81c3d 771 Gene3D G3DSA:1.10.3720.10 190 403 8.5E-29 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0465 07bbc85117f2f380c82f2a62ebb81c3d 771 Gene3D G3DSA:1.10.3720.10 548 769 7.8E-41 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0465 07bbc85117f2f380c82f2a62ebb81c3d 771 SUPERFAMILY SSF161098 195 388 2.09E-22 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0465 07bbc85117f2f380c82f2a62ebb81c3d 771 SUPERFAMILY SSF161098 559 755 1.57E-33 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0465 07bbc85117f2f380c82f2a62ebb81c3d 771 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 95 162 2.4E-14 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_b0465 07bbc85117f2f380c82f2a62ebb81c3d 771 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 276 394 3.4E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0465 07bbc85117f2f380c82f2a62ebb81c3d 771 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 579 766 4.8E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0465 07bbc85117f2f380c82f2a62ebb81c3d 771 SUPERFAMILY SSF161098 95 242 5.1E-9 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0456 bc404d46051f23bcdc4e41ba7330ab31 156 SMART SM00344 7 116 8.8E-38 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_c0456 bc404d46051f23bcdc4e41ba7330ab31 156 Gene3D G3DSA:3.30.70.920 60 156 2.3E-18 T 14-10-2018 TMO_c0456 bc404d46051f23bcdc4e41ba7330ab31 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.8E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0456 bc404d46051f23bcdc4e41ba7330ab31 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.8E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0456 bc404d46051f23bcdc4e41ba7330ab31 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.8E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0456 bc404d46051f23bcdc4e41ba7330ab31 156 Pfam PF01037 Lrp/AsnC ligand binding domain 73 147 6.8E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_c0456 bc404d46051f23bcdc4e41ba7330ab31 156 SUPERFAMILY SSF54909 70 156 3.35E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_c0456 bc404d46051f23bcdc4e41ba7330ab31 156 Gene3D G3DSA:1.10.10.10 8 59 2.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0456 bc404d46051f23bcdc4e41ba7330ab31 156 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 4.9E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0456 bc404d46051f23bcdc4e41ba7330ab31 156 SUPERFAMILY SSF46785 6 65 5.55E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2799 18e227ba2878539ac7e68be3b4a41e0f 197 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 15 197 36.412 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 TMO_2799 18e227ba2878539ac7e68be3b4a41e0f 197 Gene3D G3DSA:3.40.1740.10 10 197 1.7E-65 T 14-10-2018 TMO_2799 18e227ba2878539ac7e68be3b4a41e0f 197 Pfam PF02622 Uncharacterized ACR, COG1678 26 184 2.3E-47 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 TMO_2799 18e227ba2878539ac7e68be3b4a41e0f 197 SUPERFAMILY SSF143456 17 197 6.02E-61 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 SUPERFAMILY SSF56801 1497 2019 6.67E-132 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 SUPERFAMILY SSF47336 2001 2072 1.15E-18 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Gene3D G3DSA:3.30.300.30 848 955 3.5E-24 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Gene3D G3DSA:3.30.559.10 7 194 2.0E-34 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Pfam PF00668 Condensation domain 11 438 4.4E-35 T 14-10-2018 IPR001242 Condensation domain TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Pfam PF00668 Condensation domain 1056 1487 1.8E-91 T 14-10-2018 IPR001242 Condensation domain TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 SUPERFAMILY SSF52777 1243 1485 3.11E-54 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 SUPERFAMILY SSF56801 456 979 4.45E-126 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Pfam PF00501 AMP-binding enzyme 1515 1896 2.0E-71 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Pfam PF00501 AMP-binding enzyme 468 852 1.0E-70 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 ProSitePatterns PS00012 Phosphopantetheine attachment site. 990 1005 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2031 2046 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 SMART SM00823 Phosphopantetheine attachment site 966 1035 8.0E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 SMART SM00823 Phosphopantetheine attachment site 2007 2076 2.0E-5 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 SUPERFAMILY SSF52777 8 165 2.22E-27 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Gene3D G3DSA:3.30.559.30 217 436 2.9E-31 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 SUPERFAMILY SSF52777 1059 1236 1.45E-46 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 SUPERFAMILY SSF47336 965 1069 1.57E-17 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1637 1648 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Gene3D G3DSA:1.10.1200.10 1997 2077 4.5E-27 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Gene3D G3DSA:1.10.1200.10 956 1038 2.5E-22 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 ProSitePatterns PS00455 Putative AMP-binding domain signature. 595 606 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1534 1918 4.6E-107 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 490 875 1.7E-100 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Pfam PF00550 Phosphopantetheine attachment site 2010 2072 2.9E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Pfam PF00550 Phosphopantetheine attachment site 968 1031 5.0E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Gene3D G3DSA:3.40.50.12780 1499 1890 5.6E-106 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Gene3D G3DSA:3.40.50.12780 458 847 2.8E-104 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Pfam PF13193 AMP-binding enzyme C-terminal domain 1904 1979 7.9E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Pfam PF13193 AMP-binding enzyme C-terminal domain 861 938 2.2E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Gene3D G3DSA:3.30.559.30 1240 1484 7.4E-137 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Gene3D G3DSA:3.30.300.30 1892 1996 1.0E-30 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 SUPERFAMILY SSF52777 182 434 4.11E-32 T 14-10-2018 TMO_c0602 6e58c5e69151c35fa7d18dafb511c23b 2123 Gene3D G3DSA:3.30.559.10 1058 1428 7.4E-137 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0092 89b096e5daf02e37939793cbf529eef0 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0092 89b096e5daf02e37939793cbf529eef0 240 SUPERFAMILY SSF52540 1 235 9.25E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0092 89b096e5daf02e37939793cbf529eef0 240 Gene3D G3DSA:3.40.50.300 1 240 3.5E-72 T 14-10-2018 TMO_b0092 89b096e5daf02e37939793cbf529eef0 240 Pfam PF00005 ABC transporter 17 165 5.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0092 89b096e5daf02e37939793cbf529eef0 240 PIRSF PIRSF039085 1 240 3.9E-105 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TMO_b0092 89b096e5daf02e37939793cbf529eef0 240 SMART SM00382 26 213 1.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0520 5623176041f8f1fb21f65f6519245668 435 Gene3D G3DSA:3.40.190.10 149 422 6.7E-94 T 14-10-2018 TMO_c0520 5623176041f8f1fb21f65f6519245668 435 Pfam PF01547 Bacterial extracellular solute-binding protein 57 344 1.5E-34 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_c0520 5623176041f8f1fb21f65f6519245668 435 SUPERFAMILY SSF53850 31 427 4.78E-75 T 14-10-2018 TMO_c0520 5623176041f8f1fb21f65f6519245668 435 Gene3D G3DSA:3.40.190.10 58 381 6.7E-94 T 14-10-2018 TMO_a0030 04d7eba0834a9d58c2070c20601f680f 209 SUPERFAMILY SSF48317 7 199 1.7E-22 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily TMO_a0030 04d7eba0834a9d58c2070c20601f680f 209 Pfam PF01569 PAP2 superfamily 73 196 6.5E-21 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TMO_a0030 04d7eba0834a9d58c2070c20601f680f 209 SMART SM00014 68 193 0.0018 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TMO_a0030 04d7eba0834a9d58c2070c20601f680f 209 Gene3D G3DSA:1.20.144.10 102 207 2.1E-13 T 14-10-2018 TMO_3515 0bc00407ce2c022b0f93dbd01dfc960d 170 Pfam PF00582 Universal stress protein family 21 157 1.8E-16 T 14-10-2018 IPR006016 UspA TMO_3515 0bc00407ce2c022b0f93dbd01dfc960d 170 Gene3D G3DSA:3.40.50.620 20 158 8.6E-21 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_3515 0bc00407ce2c022b0f93dbd01dfc960d 170 SUPERFAMILY SSF52402 21 159 2.79E-19 T 14-10-2018 TMO_0900 a77d37bb9322ca660c1240bb61b12982 353 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 3.4E-32 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TMO_0900 a77d37bb9322ca660c1240bb61b12982 353 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 238 6.2E-110 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 TMO_0900 a77d37bb9322ca660c1240bb61b12982 353 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 334 2.0E-29 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TMO_0900 a77d37bb9322ca660c1240bb61b12982 353 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 353 167.4 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TMO_0900 a77d37bb9322ca660c1240bb61b12982 353 SUPERFAMILY SSF46785 260 333 1.87E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0900 a77d37bb9322ca660c1240bb61b12982 353 SUPERFAMILY SSF52540 23 254 6.97E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0900 a77d37bb9322ca660c1240bb61b12982 353 Gene3D G3DSA:1.10.8.60 185 258 1.0E-26 T 14-10-2018 TMO_0900 a77d37bb9322ca660c1240bb61b12982 353 Gene3D G3DSA:1.10.10.10 260 337 4.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0900 a77d37bb9322ca660c1240bb61b12982 353 SMART SM00382 54 181 1.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0900 a77d37bb9322ca660c1240bb61b12982 353 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.4E-133 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TMO_0900 a77d37bb9322ca660c1240bb61b12982 353 Gene3D G3DSA:3.40.50.300 22 184 4.4E-40 T 14-10-2018 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 PRINTS PR00415 Aconitase family signature 116 124 2.1E-37 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 PRINTS PR00415 Aconitase family signature 406 419 2.1E-37 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 PRINTS PR00415 Aconitase family signature 203 216 2.1E-37 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 PRINTS PR00415 Aconitase family signature 217 230 2.1E-37 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 PRINTS PR00415 Aconitase family signature 127 140 2.1E-37 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 PRINTS PR00415 Aconitase family signature 141 156 2.1E-37 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 PRINTS PR00415 Aconitase family signature 294 308 2.1E-37 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 PRINTS PR00415 Aconitase family signature 350 361 2.1E-37 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 Gene3D G3DSA:3.30.499.20 12 294 5.7E-78 T 14-10-2018 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 Pfam PF00330 Aconitase family (aconitate hydratase) 15 464 4.0E-134 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 SUPERFAMILY SSF53732 9 472 5.89E-143 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TMO_c0358 918a2fa4ee426d6dd15548798bc39dc4 473 Gene3D G3DSA:3.30.499.10 336 473 1.3E-45 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TMO_1371 08dedc7fa4178b7dd664b49e10bae9af 299 SUPERFAMILY SSF48179 164 294 3.74E-43 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_1371 08dedc7fa4178b7dd664b49e10bae9af 299 Gene3D G3DSA:1.10.1040.10 165 299 2.8E-46 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_1371 08dedc7fa4178b7dd664b49e10bae9af 299 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 TMO_1371 08dedc7fa4178b7dd664b49e10bae9af 299 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 292 1.3E-41 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 TMO_1371 08dedc7fa4178b7dd664b49e10bae9af 299 SUPERFAMILY SSF51735 1 162 3.58E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1371 08dedc7fa4178b7dd664b49e10bae9af 299 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 6.0E-49 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 TMO_1371 08dedc7fa4178b7dd664b49e10bae9af 299 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 293 2.0E-132 T 14-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 TMO_1371 08dedc7fa4178b7dd664b49e10bae9af 299 PIRSF PIRSF000103 1 299 2.5E-82 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 TMO_1371 08dedc7fa4178b7dd664b49e10bae9af 299 Gene3D G3DSA:3.40.50.720 1 163 1.0E-55 T 14-10-2018 TMO_2707 f4e98e3d58fa912523754d1b27ec58df 255 Gene3D G3DSA:1.10.150.450 28 107 1.5E-7 T 14-10-2018 TMO_2707 f4e98e3d58fa912523754d1b27ec58df 255 SUPERFAMILY SSF56784 32 234 4.29E-33 T 14-10-2018 IPR036412 HAD-like superfamily TMO_2707 f4e98e3d58fa912523754d1b27ec58df 255 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 34 211 3.8E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_2707 f4e98e3d58fa912523754d1b27ec58df 255 Gene3D G3DSA:3.40.50.1000 108 223 8.6E-21 T 14-10-2018 IPR023214 HAD superfamily TMO_2707 f4e98e3d58fa912523754d1b27ec58df 255 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 32 210 4.6E-58 T 14-10-2018 IPR010237 Pyrimidine 5-nucleotidase TMO_2707 f4e98e3d58fa912523754d1b27ec58df 255 Pfam PF13419 Haloacid dehalogenase-like hydrolase 35 211 4.9E-9 T 14-10-2018 TMO_3110 3970d26582e234416904e60146102168 354 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 354 160.182 T 14-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 TMO_3110 3970d26582e234416904e60146102168 354 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 240 330 1.2E-7 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain TMO_3110 3970d26582e234416904e60146102168 354 Pfam PF13186 Iron-sulfur cluster-binding domain 237 303 8.1E-7 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain TMO_3110 3970d26582e234416904e60146102168 354 Pfam PF13353 4Fe-4S single cluster domain 16 92 1.4E-5 T 14-10-2018 TMO_3110 3970d26582e234416904e60146102168 354 PIRSF PIRSF037420 1 348 4.0E-103 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E TMO_3110 3970d26582e234416904e60146102168 354 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 5 339 2.3E-156 T 14-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 TMO_3110 3970d26582e234416904e60146102168 354 SMART SM00729 9 210 0.0096 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_3110 3970d26582e234416904e60146102168 354 SUPERFAMILY SSF102114 7 312 5.1E-65 T 14-10-2018 TMO_3110 3970d26582e234416904e60146102168 354 Pfam PF04055 Radical SAM superfamily 15 158 5.0E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_3110 3970d26582e234416904e60146102168 354 Gene3D G3DSA:3.20.20.70 9 288 8.9E-39 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1513 e7c3bbd72a526802510cf72539547244 418 Gene3D G3DSA:2.40.30.170 288 368 1.9E-9 T 14-10-2018 TMO_1513 e7c3bbd72a526802510cf72539547244 418 Gene3D G3DSA:2.40.30.170 61 71 1.1E-7 T 14-10-2018 TMO_1513 e7c3bbd72a526802510cf72539547244 418 Gene3D G3DSA:1.10.287.470 106 178 1.1E-7 T 14-10-2018 TMO_1513 e7c3bbd72a526802510cf72539547244 418 Gene3D G3DSA:1.10.287.470 185 247 1.9E-9 T 14-10-2018 TMO_1513 e7c3bbd72a526802510cf72539547244 418 Gene3D G3DSA:2.40.50.100 248 287 1.9E-9 T 14-10-2018 TMO_1513 e7c3bbd72a526802510cf72539547244 418 TIGRFAM TIGR03794 NHLM_micro_HlyD: NHLM bacteriocin system secretion protein 14 413 2.6E-82 T 14-10-2018 IPR022275 NHPM bacteriocin system secretion protein, HylD TMO_1513 e7c3bbd72a526802510cf72539547244 418 Gene3D G3DSA:2.40.50.100 72 105 1.1E-7 T 14-10-2018 TMO_1513 e7c3bbd72a526802510cf72539547244 418 Pfam PF13437 HlyD family secretion protein 251 335 2.4E-8 T 14-10-2018 TMO_c0672 8301e5d5f87d42561efb346fc957e969 327 Gene3D G3DSA:3.40.190.10 118 255 3.3E-67 T 14-10-2018 TMO_c0672 8301e5d5f87d42561efb346fc957e969 327 Gene3D G3DSA:3.40.190.10 39 318 3.3E-67 T 14-10-2018 TMO_c0672 8301e5d5f87d42561efb346fc957e969 327 SUPERFAMILY SSF53850 32 319 6.73E-52 T 14-10-2018 TMO_c0672 8301e5d5f87d42561efb346fc957e969 327 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 12 318 3.3E-51 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_c0672 8301e5d5f87d42561efb346fc957e969 327 Pfam PF16868 NMT1-like family 40 318 1.3E-50 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_c0304 b1cfd7ccf3f7c5902812abfe422da173 128 Gene3D G3DSA:1.10.357.10 7 127 8.3E-16 T 14-10-2018 TMO_c0304 b1cfd7ccf3f7c5902812abfe422da173 128 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 15 114 1.2E-4 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 TMO_c0304 b1cfd7ccf3f7c5902812abfe422da173 128 SUPERFAMILY SSF48498 14 117 2.22E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1319 7ee9b648840f7c9bf870abaf50dead41 430 Gene3D G3DSA:3.40.190.10 38 384 8.9E-104 T 14-10-2018 TMO_1319 7ee9b648840f7c9bf870abaf50dead41 430 Pfam PF13416 Bacterial extracellular solute-binding protein 50 365 8.6E-46 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_1319 7ee9b648840f7c9bf870abaf50dead41 430 Gene3D G3DSA:3.40.190.10 149 420 8.9E-104 T 14-10-2018 TMO_1319 7ee9b648840f7c9bf870abaf50dead41 430 SUPERFAMILY SSF53850 30 422 1.18E-70 T 14-10-2018 TMO_c0280 11db389805d69dbc1c4db63c369b0e76 430 Gene3D G3DSA:3.90.1150.10 19 400 3.7E-174 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0280 11db389805d69dbc1c4db63c369b0e76 430 Gene3D G3DSA:3.40.640.10 45 296 3.7E-174 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0280 11db389805d69dbc1c4db63c369b0e76 430 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 15 429 51.411 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_c0280 11db389805d69dbc1c4db63c369b0e76 430 SUPERFAMILY SSF53383 14 428 7.46E-169 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0280 11db389805d69dbc1c4db63c369b0e76 430 PIRSF PIRSF000412 2 430 2.4E-165 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_c0280 11db389805d69dbc1c4db63c369b0e76 430 Pfam PF00464 Serine hydroxymethyltransferase 17 393 2.5E-159 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_c0280 11db389805d69dbc1c4db63c369b0e76 430 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 230 246 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_c0253 077f19cb0fd73c7fe30bfb8f543d8dfe 622 SMART SM00382 31 197 8.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0253 077f19cb0fd73c7fe30bfb8f543d8dfe 622 SMART SM00382 319 489 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0253 077f19cb0fd73c7fe30bfb8f543d8dfe 622 SUPERFAMILY SSF52540 279 492 3.03E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0253 077f19cb0fd73c7fe30bfb8f543d8dfe 622 Pfam PF16326 ABC transporter C-terminal domain 541 610 9.8E-20 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 TMO_c0253 077f19cb0fd73c7fe30bfb8f543d8dfe 622 Gene3D G3DSA:3.40.50.300 1 233 4.6E-50 T 14-10-2018 TMO_c0253 077f19cb0fd73c7fe30bfb8f543d8dfe 622 Gene3D G3DSA:3.40.50.300 254 529 1.4E-60 T 14-10-2018 TMO_c0253 077f19cb0fd73c7fe30bfb8f543d8dfe 622 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0253 077f19cb0fd73c7fe30bfb8f543d8dfe 622 Gene3D G3DSA:1.10.287.380 531 614 3.9E-21 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 TMO_c0253 077f19cb0fd73c7fe30bfb8f543d8dfe 622 SUPERFAMILY SSF52540 4 201 3.73E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0253 077f19cb0fd73c7fe30bfb8f543d8dfe 622 Pfam PF00005 ABC transporter 25 152 2.0E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0253 077f19cb0fd73c7fe30bfb8f543d8dfe 622 Pfam PF00005 ABC transporter 312 445 3.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0325 c1a08dfef3fb0fab6c4c47b28c9d87b3 682 SUPERFAMILY SSF51735 332 662 2.88E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0325 c1a08dfef3fb0fab6c4c47b28c9d87b3 682 Pfam PF01370 NAD dependent epimerase/dehydratase family 332 593 8.3E-46 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TMO_a0325 c1a08dfef3fb0fab6c4c47b28c9d87b3 682 SUPERFAMILY SSF51445 25 291 4.58E-33 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_a0325 c1a08dfef3fb0fab6c4c47b28c9d87b3 682 Gene3D G3DSA:3.40.50.720 331 665 4.3E-84 T 14-10-2018 TMO_a0325 c1a08dfef3fb0fab6c4c47b28c9d87b3 682 Gene3D G3DSA:3.20.20.80 25 305 3.7E-25 T 14-10-2018 TMO_2809 0530e7e736c3e21668158497d40d1ed7 269 Gene3D G3DSA:1.10.287.70 8 76 1.2E-24 T 14-10-2018 TMO_2809 0530e7e736c3e21668158497d40d1ed7 269 Gene3D G3DSA:1.20.120.80 79 269 5.3E-79 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2809 0530e7e736c3e21668158497d40d1ed7 269 SUPERFAMILY SSF81452 8 268 5.13E-99 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2809 0530e7e736c3e21668158497d40d1ed7 269 Pfam PF00510 Cytochrome c oxidase subunit III 12 268 4.6E-100 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1901 6b92f576f32ef7c0b7d060cfa1be29ee 324 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 30 323 6.9E-93 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 TMO_1901 6b92f576f32ef7c0b7d060cfa1be29ee 324 SUPERFAMILY SSF142754 30 322 6.8E-108 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 TMO_1901 6b92f576f32ef7c0b7d060cfa1be29ee 324 Pfam PF02445 Quinolinate synthetase A protein 32 321 3.7E-111 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 TMO_1901 6b92f576f32ef7c0b7d060cfa1be29ee 324 Gene3D G3DSA:3.40.50.10800 31 304 6.3E-111 T 14-10-2018 TMO_1901 6b92f576f32ef7c0b7d060cfa1be29ee 324 Gene3D G3DSA:3.40.50.10800 112 321 6.3E-111 T 14-10-2018 TMO_1901 6b92f576f32ef7c0b7d060cfa1be29ee 324 Gene3D G3DSA:3.40.50.10800 195 279 6.3E-111 T 14-10-2018 TMO_1901 6b92f576f32ef7c0b7d060cfa1be29ee 324 Hamap MF_00568 Quinolinate synthase A [nadA]. 27 323 43.567 T 14-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 TMO_0299 783e585600d475eb85d680f91ae4c8bb 204 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 123 1.5E-17 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_0299 783e585600d475eb85d680f91ae4c8bb 204 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 11 204 4.5E-80 T 14-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent TMO_0299 783e585600d475eb85d680f91ae4c8bb 204 SUPERFAMILY SSF50475 31 151 1.0E-23 T 14-10-2018 TMO_0299 783e585600d475eb85d680f91ae4c8bb 204 Gene3D G3DSA:2.30.110.10 31 155 1.0E-25 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_a0489 cb2a58be379ca840f71dc3f6691eb721 311 SUPERFAMILY SSF53795 120 194 1.98E-12 T 14-10-2018 TMO_a0489 cb2a58be379ca840f71dc3f6691eb721 311 Gene3D G3DSA:3.40.50.300 117 192 2.9E-11 T 14-10-2018 TMO_2926 66edaca32d6ebb4ef29f2e9e25c0451d 214 Pfam PF00072 Response regulator receiver domain 3 111 1.4E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2926 66edaca32d6ebb4ef29f2e9e25c0451d 214 Gene3D G3DSA:3.40.50.2300 1 99 3.0E-14 T 14-10-2018 TMO_2926 66edaca32d6ebb4ef29f2e9e25c0451d 214 Gene3D G3DSA:1.10.10.10 100 214 1.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2926 66edaca32d6ebb4ef29f2e9e25c0451d 214 SUPERFAMILY SSF46894 143 212 3.74E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_2926 66edaca32d6ebb4ef29f2e9e25c0451d 214 SMART SM00448 1 111 3.5E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2926 66edaca32d6ebb4ef29f2e9e25c0451d 214 SUPERFAMILY SSF52172 2 129 3.56E-22 T 14-10-2018 IPR011006 CheY-like superfamily TMO_2926 66edaca32d6ebb4ef29f2e9e25c0451d 214 SMART SM00421 149 206 2.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_2926 66edaca32d6ebb4ef29f2e9e25c0451d 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 4.0E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_2926 66edaca32d6ebb4ef29f2e9e25c0451d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 2.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_2926 66edaca32d6ebb4ef29f2e9e25c0451d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 2.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_2926 66edaca32d6ebb4ef29f2e9e25c0451d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 2.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_1567 19467e1c310a7ed7c45058f175b30b07 322 SUPERFAMILY SSF51430 2 303 2.23E-93 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_1567 19467e1c310a7ed7c45058f175b30b07 322 Gene3D G3DSA:3.20.20.100 1 320 1.8E-108 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_1567 19467e1c310a7ed7c45058f175b30b07 322 Pfam PF00248 Aldo/keto reductase family 5 301 1.2E-72 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_1517 cacaccc30ba25f079557ee8a8e673326 464 Gene3D G3DSA:1.20.1600.10 37 440 2.4E-80 T 14-10-2018 TMO_1517 cacaccc30ba25f079557ee8a8e673326 464 SUPERFAMILY SSF56954 12 431 4.19E-73 T 14-10-2018 TMO_1517 cacaccc30ba25f079557ee8a8e673326 464 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 36 438 8.5E-77 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 TMO_1517 cacaccc30ba25f079557ee8a8e673326 464 Pfam PF02321 Outer membrane efflux protein 248 429 1.2E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_1517 cacaccc30ba25f079557ee8a8e673326 464 Pfam PF02321 Outer membrane efflux protein 39 225 2.9E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_2327 fcb12600bffedc5ad3c469fa2b5ecc6c 173 Gene3D G3DSA:1.20.120.450 6 166 5.6E-39 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TMO_2327 fcb12600bffedc5ad3c469fa2b5ecc6c 173 SUPERFAMILY SSF109854 6 147 5.13E-30 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TMO_2327 fcb12600bffedc5ad3c469fa2b5ecc6c 173 Pfam PF05163 DinB family 9 164 5.0E-30 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB TMO_1344 6b91159b32077c91906b0e19f74e9d7f 370 PRINTS PR01374 Gram-negative bacterial tonB protein signature 172 182 2.4E-7 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TMO_1344 6b91159b32077c91906b0e19f74e9d7f 370 PRINTS PR01374 Gram-negative bacterial tonB protein signature 285 306 2.4E-7 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TMO_1344 6b91159b32077c91906b0e19f74e9d7f 370 PRINTS PR01374 Gram-negative bacterial tonB protein signature 306 324 2.4E-7 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TMO_1344 6b91159b32077c91906b0e19f74e9d7f 370 SUPERFAMILY SSF74653 284 354 1.07E-15 T 14-10-2018 TMO_1344 6b91159b32077c91906b0e19f74e9d7f 370 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 290 369 1.0E-15 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 TMO_1344 6b91159b32077c91906b0e19f74e9d7f 370 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 292 369 5.8E-19 T 14-10-2018 IPR006260 TonB/TolA, C-terminal TMO_3326 ad7b5553bb2684f5e7bdd2e663bb269e 290 Gene3D G3DSA:3.40.50.1000 17 250 1.7E-51 T 14-10-2018 IPR023214 HAD superfamily TMO_3326 ad7b5553bb2684f5e7bdd2e663bb269e 290 Pfam PF13242 HAD-hyrolase-like 200 254 4.9E-10 T 14-10-2018 TMO_3326 ad7b5553bb2684f5e7bdd2e663bb269e 290 Gene3D G3DSA:3.40.50.1000 100 200 1.7E-51 T 14-10-2018 IPR023214 HAD superfamily TMO_3326 ad7b5553bb2684f5e7bdd2e663bb269e 290 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 19 245 5.1E-30 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA TMO_3326 ad7b5553bb2684f5e7bdd2e663bb269e 290 Pfam PF13344 Haloacid dehalogenase-like hydrolase 19 119 3.7E-15 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA TMO_3326 ad7b5553bb2684f5e7bdd2e663bb269e 290 SUPERFAMILY SSF56784 17 264 4.72E-44 T 14-10-2018 IPR036412 HAD-like superfamily TMO_3326 ad7b5553bb2684f5e7bdd2e663bb269e 290 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 11 245 2.2E-55 T 14-10-2018 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 TMO_c0788 9ba30803fcc4d5b67f3099f4cd5b1880 40 Gene3D G3DSA:3.30.2310.20 1 40 5.9E-7 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_2672 2e9ab75fd0cf80072376f818b642315d 542 Gene3D G3DSA:3.50.50.60 7 381 1.4E-207 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2672 2e9ab75fd0cf80072376f818b642315d 542 SUPERFAMILY SSF51905 2 441 7.08E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2672 2e9ab75fd0cf80072376f818b642315d 542 Gene3D G3DSA:3.30.9.90 79 443 1.4E-207 T 14-10-2018 TMO_2672 2e9ab75fd0cf80072376f818b642315d 542 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 439 539 1.1E-50 T 14-10-2018 TMO_2672 2e9ab75fd0cf80072376f818b642315d 542 Gene3D G3DSA:3.30.70.20 444 537 2.4E-39 T 14-10-2018 TMO_2672 2e9ab75fd0cf80072376f818b642315d 542 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 67 1.1E-6 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_2672 2e9ab75fd0cf80072376f818b642315d 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 175 190 3.6E-7 T 14-10-2018 TMO_2672 2e9ab75fd0cf80072376f818b642315d 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 3.6E-7 T 14-10-2018 TMO_2672 2e9ab75fd0cf80072376f818b642315d 542 SUPERFAMILY SSF54862 443 542 2.65E-29 T 14-10-2018 TMO_2672 2e9ab75fd0cf80072376f818b642315d 542 SUPERFAMILY SSF54373 207 303 1.02E-36 T 14-10-2018 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 SUPERFAMILY SSF69765 255 409 3.4E-58 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 257 407 3.1E-56 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 Pfam PF02542 YgbB family 256 407 9.7E-56 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 20 410 43.033 T 14-10-2018 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 23 244 3.1E-62 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 119 126 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 21 243 40.83 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 288 303 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 Gene3D G3DSA:3.30.1330.50 254 410 4.8E-60 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 SUPERFAMILY SSF53448 23 243 1.58E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 254 409 31.12 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 24 242 1.2E-67 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TMO_1707 7138a38bb49e646fb5d6d99bc81f273a 419 Gene3D G3DSA:3.90.550.10 19 248 1.7E-71 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_a0357 380fd45f3a33d9600378c054965f04f0 1009 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 725 992 2.0E-60 T 14-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal TMO_a0357 380fd45f3a33d9600378c054965f04f0 1009 Gene3D G3DSA:3.40.50.300 249 458 6.2E-61 T 14-10-2018 TMO_a0357 380fd45f3a33d9600378c054965f04f0 1009 Pfam PF04851 Type III restriction enzyme, res subunit 249 427 4.3E-35 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TMO_a0357 380fd45f3a33d9600378c054965f04f0 1009 SMART SM00487 246 461 1.0E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_a0357 380fd45f3a33d9600378c054965f04f0 1009 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 7 190 3.3E-30 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TMO_a0357 380fd45f3a33d9600378c054965f04f0 1009 Gene3D G3DSA:3.90.640.50 31 98 7.9E-69 T 14-10-2018 TMO_a0357 380fd45f3a33d9600378c054965f04f0 1009 Gene3D G3DSA:3.40.50.300 459 722 7.6E-76 T 14-10-2018 TMO_a0357 380fd45f3a33d9600378c054965f04f0 1009 SUPERFAMILY SSF52540 249 429 7.51E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0357 380fd45f3a33d9600378c054965f04f0 1009 Gene3D G3DSA:3.90.1570.50 7 240 7.9E-69 T 14-10-2018 TMO_a0357 380fd45f3a33d9600378c054965f04f0 1009 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 8 716 1.5E-107 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 Gene3D G3DSA:3.30.300.180 29 129 2.1E-13 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 Gene3D G3DSA:1.10.1750.10 426 524 8.8E-36 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 ProSitePatterns PS01008 DnaA protein signature. 483 502 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 SUPERFAMILY SSF52540 190 402 3.39E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 Gene3D G3DSA:3.40.50.300 176 354 9.8E-52 T 14-10-2018 TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 SUPERFAMILY SSF48295 420 524 1.49E-38 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 Pfam PF00308 Bacterial dnaA protein 190 406 2.2E-89 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 31 523 3.7E-170 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 223 243 6.2E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 255 269 6.2E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 287 301 6.2E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 321 348 6.2E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 483 502 6.2E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 28 524 32.405 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 SMART SM00760 433 502 1.1E-42 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 Pfam PF11638 DnaA N-terminal domain 29 90 4.0E-21 T 14-10-2018 IPR024633 DnaA N-terminal domain TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 SMART SM00382 222 353 8.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 434 502 8.4E-32 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TMO_0001 b3026c139447aac09cfb29cb428e9d82 525 Gene3D G3DSA:1.10.8.60 356 425 1.6E-20 T 14-10-2018 TMO_2723 fbc967b061b02311b350058aa5f10730 619 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2723 fbc967b061b02311b350058aa5f10730 619 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 249 278 8.1E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_2723 fbc967b061b02311b350058aa5f10730 619 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 548 592 3.1E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_2723 fbc967b061b02311b350058aa5f10730 619 SUPERFAMILY SSF52540 18 269 2.33E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2723 fbc967b061b02311b350058aa5f10730 619 Gene3D G3DSA:3.40.50.300 315 615 1.1E-85 T 14-10-2018 TMO_2723 fbc967b061b02311b350058aa5f10730 619 Gene3D G3DSA:3.40.50.300 17 307 9.9E-86 T 14-10-2018 TMO_2723 fbc967b061b02311b350058aa5f10730 619 Pfam PF00005 ABC transporter 345 496 1.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2723 fbc967b061b02311b350058aa5f10730 619 SMART SM00382 43 255 4.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2723 fbc967b061b02311b350058aa5f10730 619 SMART SM00382 353 545 4.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2723 fbc967b061b02311b350058aa5f10730 619 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2723 fbc967b061b02311b350058aa5f10730 619 SUPERFAMILY SSF52540 320 568 1.82E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2723 fbc967b061b02311b350058aa5f10730 619 Pfam PF00005 ABC transporter 35 197 9.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0169 c9d29f88325e4576653e4a37f302e28c 238 SUPERFAMILY SSF48498 96 209 4.45E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_a0169 c9d29f88325e4576653e4a37f302e28c 238 Pfam PF08359 YsiA-like protein, C-terminal region 82 207 5.9E-9 T 14-10-2018 IPR013570 Transcription regulator YsiA, C-terminal TMO_a0169 c9d29f88325e4576653e4a37f302e28c 238 Gene3D G3DSA:1.10.357.10 71 211 9.2E-29 T 14-10-2018 TMO_a0169 c9d29f88325e4576653e4a37f302e28c 238 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 9.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0169 c9d29f88325e4576653e4a37f302e28c 238 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 9.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0169 c9d29f88325e4576653e4a37f302e28c 238 Gene3D G3DSA:1.10.10.60 5 70 5.2E-19 T 14-10-2018 TMO_a0169 c9d29f88325e4576653e4a37f302e28c 238 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 73 3.8E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0169 c9d29f88325e4576653e4a37f302e28c 238 SUPERFAMILY SSF46689 14 99 1.9E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0169 c9d29f88325e4576653e4a37f302e28c 238 ProSitePatterns PS01081 TetR-type HTH domain signature. 40 71 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_2035 fab17fc9f6cd18d2d27d5590252eb8bf 376 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 208 1.5E-80 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_2035 fab17fc9f6cd18d2d27d5590252eb8bf 376 SUPERFAMILY SSF55821 11 213 4.35E-82 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TMO_2035 fab17fc9f6cd18d2d27d5590252eb8bf 376 PIRSF PIRSF001259 12 375 5.0E-111 T 14-10-2018 TMO_2035 fab17fc9f6cd18d2d27d5590252eb8bf 376 Gene3D G3DSA:3.40.50.10990 217 370 2.8E-25 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TMO_2035 fab17fc9f6cd18d2d27d5590252eb8bf 376 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 36.283 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_2035 fab17fc9f6cd18d2d27d5590252eb8bf 376 SUPERFAMILY SSF142695 216 370 4.45E-35 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TMO_2035 fab17fc9f6cd18d2d27d5590252eb8bf 376 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 17 209 4.5E-68 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_2035 fab17fc9f6cd18d2d27d5590252eb8bf 376 Gene3D G3DSA:3.90.870.10 4 216 9.3E-84 T 14-10-2018 TMO_2035 fab17fc9f6cd18d2d27d5590252eb8bf 376 Pfam PF00925 GTP cyclohydrolase II 218 366 4.5E-26 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TMO_1783 e925b60d9346b29ed993234dc70bdff1 1166 SUPERFAMILY SSF89550 6 274 8.44E-12 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TMO_1783 e925b60d9346b29ed993234dc70bdff1 1166 Gene3D G3DSA:1.10.10.1600 450 525 1.8E-25 T 14-10-2018 TMO_1783 e925b60d9346b29ed993234dc70bdff1 1166 SUPERFAMILY SSF160975 838 893 4.84E-5 T 14-10-2018 TMO_1783 e925b60d9346b29ed993234dc70bdff1 1166 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1043 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_1783 e925b60d9346b29ed993234dc70bdff1 1166 Pfam PF02811 PHP domain 8 179 3.1E-33 T 14-10-2018 IPR004013 PHP domain GO:0003824 TMO_1783 e925b60d9346b29ed993234dc70bdff1 1166 Gene3D G3DSA:3.20.20.140 1 280 8.0E-80 T 14-10-2018 TMO_1783 e925b60d9346b29ed993234dc70bdff1 1166 SMART SM00481 7 74 7.1E-16 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TMO_1783 e925b60d9346b29ed993234dc70bdff1 1166 Pfam PF14579 Helix-hairpin-helix motif 815 908 1.5E-24 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_1783 e925b60d9346b29ed993234dc70bdff1 1166 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 303 741 2.8E-171 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_2988 09fe93378523c54e08442153fb7fdb9f 186 SUPERFAMILY SSF47928 8 112 3.66E-22 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2988 09fe93378523c54e08442153fb7fdb9f 186 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 12 179 2.5E-38 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2988 09fe93378523c54e08442153fb7fdb9f 186 Hamap MF_01416 ATP synthase subunit delta [atpD]. 7 184 20.063 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2988 09fe93378523c54e08442153fb7fdb9f 186 PRINTS PR00125 ATP synthase delta subunit signature 142 157 9.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2988 09fe93378523c54e08442153fb7fdb9f 186 PRINTS PR00125 ATP synthase delta subunit signature 157 175 9.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2988 09fe93378523c54e08442153fb7fdb9f 186 PRINTS PR00125 ATP synthase delta subunit signature 92 106 9.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2988 09fe93378523c54e08442153fb7fdb9f 186 PRINTS PR00125 ATP synthase delta subunit signature 11 30 9.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2988 09fe93378523c54e08442153fb7fdb9f 186 PRINTS PR00125 ATP synthase delta subunit signature 81 92 9.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2988 09fe93378523c54e08442153fb7fdb9f 186 Gene3D G3DSA:1.10.520.20 10 105 7.3E-22 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2988 09fe93378523c54e08442153fb7fdb9f 186 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 144 163 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2988 09fe93378523c54e08442153fb7fdb9f 186 Pfam PF00213 ATP synthase delta (OSCP) subunit 11 181 6.0E-51 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1611 7adf00bdc8dc8aa8516e6a345ad31672 242 Gene3D G3DSA:3.40.630.30 10 226 3.6E-6 T 14-10-2018 TMO_1611 7adf00bdc8dc8aa8516e6a345ad31672 242 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 8 236 38.952 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 TMO_1611 7adf00bdc8dc8aa8516e6a345ad31672 242 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 230 1.3E-37 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 TMO_1611 7adf00bdc8dc8aa8516e6a345ad31672 242 PIRSF PIRSF037208 1 242 7.7E-85 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 TMO_1611 7adf00bdc8dc8aa8516e6a345ad31672 242 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 18 87 2.9E-14 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 TMO_1611 7adf00bdc8dc8aa8516e6a345ad31672 242 SUPERFAMILY SSF55729 83 239 1.86E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2187 a3ea182638f015e75980fc196003171f 372 Gene3D G3DSA:1.10.1200.160 315 346 1.3E-55 T 14-10-2018 TMO_2187 a3ea182638f015e75980fc196003171f 372 Gene3D G3DSA:2.40.128.260 193 365 1.3E-55 T 14-10-2018 TMO_2187 a3ea182638f015e75980fc196003171f 372 Pfam PF03743 Bacterial conjugation TrbI-like protein 190 367 7.6E-59 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI TMO_0250 db3e0336d7f1993eeadb1709aa36f0f0 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 99 3.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0250 db3e0336d7f1993eeadb1709aa36f0f0 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 119 3.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0250 db3e0336d7f1993eeadb1709aa36f0f0 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 3.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0250 db3e0336d7f1993eeadb1709aa36f0f0 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 133 153 3.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0250 db3e0336d7f1993eeadb1709aa36f0f0 163 SUPERFAMILY SSF46785 23 158 1.07E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0250 db3e0336d7f1993eeadb1709aa36f0f0 163 SMART SM00347 42 143 6.6E-28 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0250 db3e0336d7f1993eeadb1709aa36f0f0 163 Gene3D G3DSA:1.10.10.10 17 160 2.3E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0250 db3e0336d7f1993eeadb1709aa36f0f0 163 Pfam PF01047 MarR family 49 108 1.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0250 db3e0336d7f1993eeadb1709aa36f0f0 163 ProSitePatterns PS01117 MarR-type HTH domain signature. 82 116 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_0681 055f6b36cf444932e81f08c24670d4f8 204 Gene3D G3DSA:3.40.50.10490 11 193 8.6E-63 T 14-10-2018 TMO_0681 055f6b36cf444932e81f08c24670d4f8 204 SUPERFAMILY SSF53697 13 196 3.84E-47 T 14-10-2018 TMO_0681 055f6b36cf444932e81f08c24670d4f8 204 Pfam PF13580 SIS domain 18 152 9.2E-22 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TMO_b0267 f2f75667c56c8e54f9aa77d0fffbd49d 283 SUPERFAMILY SSF161098 70 255 3.53E-28 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0267 f2f75667c56c8e54f9aa77d0fffbd49d 283 Gene3D G3DSA:1.10.3720.10 69 270 1.6E-22 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0267 f2f75667c56c8e54f9aa77d0fffbd49d 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 274 1.2E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0530 523de14592dc70a5ebc69a1c011fb366 590 SMART SM00267 417 590 6.1E-56 T 14-10-2018 IPR000160 GGDEF domain TMO_c0530 523de14592dc70a5ebc69a1c011fb366 590 Gene3D G3DSA:1.20.1480.50 292 388 1.7E-7 T 14-10-2018 TMO_c0530 523de14592dc70a5ebc69a1c011fb366 590 Gene3D G3DSA:3.30.450.20 95 199 9.8E-17 T 14-10-2018 TMO_c0530 523de14592dc70a5ebc69a1c011fb366 590 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 424 588 1.2E-50 T 14-10-2018 IPR000160 GGDEF domain TMO_c0530 523de14592dc70a5ebc69a1c011fb366 590 Gene3D G3DSA:3.30.70.270 419 589 9.4E-56 T 14-10-2018 TMO_c0530 523de14592dc70a5ebc69a1c011fb366 590 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 586 9.2E-45 T 14-10-2018 IPR000160 GGDEF domain TMO_c0530 523de14592dc70a5ebc69a1c011fb366 590 SUPERFAMILY SSF55073 433 588 3.45E-47 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_c0530 523de14592dc70a5ebc69a1c011fb366 590 SUPERFAMILY SSF103190 93 201 5.76E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TMO_c0530 523de14592dc70a5ebc69a1c011fb366 590 SMART SM00304 330 383 0.002 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_b0451 35f2ca6946a022e7e801c8ff450f509f 1246 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1237 0.0 T 14-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 TMO_b0451 35f2ca6946a022e7e801c8ff450f509f 1246 Pfam PF00384 Molybdopterin oxidoreductase 109 833 1.5E-155 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_b0451 35f2ca6946a022e7e801c8ff450f509f 1246 SUPERFAMILY SSF50692 1084 1238 1.51E-46 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TMO_b0451 35f2ca6946a022e7e801c8ff450f509f 1246 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 778 795 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TMO_b0451 35f2ca6946a022e7e801c8ff450f509f 1246 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1127 1154 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TMO_b0451 35f2ca6946a022e7e801c8ff450f509f 1246 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 41 9.2E-17 T 14-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 TMO_b0451 35f2ca6946a022e7e801c8ff450f509f 1246 SMART SM00926 44 106 2.6E-7 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_b0451 35f2ca6946a022e7e801c8ff450f509f 1246 SUPERFAMILY SSF53706 18 1072 0.0 T 14-10-2018 TMO_b0451 35f2ca6946a022e7e801c8ff450f509f 1246 Pfam PF01568 Molydopterin dinucleotide binding domain 1089 1202 1.1E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TMO_b0451 35f2ca6946a022e7e801c8ff450f509f 1246 Gene3D G3DSA:3.40.50.12440 45 1246 0.0 T 14-10-2018 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 1.5E-8 T 14-10-2018 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 1.5E-8 T 14-10-2018 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 167 180 1.5E-8 T 14-10-2018 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Pfam PF02540 NAD synthase 213 244 9.8E-6 T 14-10-2018 IPR022310 NAD/GMP synthase TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Pfam PF00958 GMP synthase C terminal domain 423 514 1.0E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00097 Anthranilate synthase component II signature 49 58 3.0E-7 T 14-10-2018 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00097 Anthranilate synthase component II signature 167 180 3.0E-7 T 14-10-2018 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00097 Anthranilate synthase component II signature 76 87 3.0E-7 T 14-10-2018 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 SUPERFAMILY SSF52402 187 408 3.09E-59 T 14-10-2018 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 SUPERFAMILY SSF54810 395 515 1.83E-50 T 14-10-2018 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 515 53.474 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 515 2.3E-145 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Gene3D G3DSA:3.40.50.880 1 199 1.5E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 194 3.6E-69 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Pfam PF00117 Glutamine amidotransferase class-I 7 188 1.5E-35 T 14-10-2018 IPR017926 Glutamine amidotransferase TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Gene3D G3DSA:3.40.50.620 200 395 6.2E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 SUPERFAMILY SSF52317 2 227 8.75E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1445 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Gene3D G3DSA:3.30.300.10 396 515 2.5E-51 T 14-10-2018 TMO_0890 b6856ff526086cffca7baf9da2b3cc56 248 Pfam PF01177 Asp/Glu/Hydantoin racemase 17 234 9.1E-15 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TMO_0890 b6856ff526086cffca7baf9da2b3cc56 248 SUPERFAMILY SSF53681 126 217 7.33E-7 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TMO_0890 b6856ff526086cffca7baf9da2b3cc56 248 Gene3D G3DSA:3.40.50.1860 12 232 7.2E-22 T 14-10-2018 TMO_0890 b6856ff526086cffca7baf9da2b3cc56 248 Gene3D G3DSA:3.40.50.1860 123 227 7.2E-22 T 14-10-2018 TMO_0890 b6856ff526086cffca7baf9da2b3cc56 248 SUPERFAMILY SSF53681 12 107 7.72E-6 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TMO_0890 b6856ff526086cffca7baf9da2b3cc56 248 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 205 215 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TMO_0421 f8047faa08d5f8f2d807c50ccc9ea264 326 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_0421 f8047faa08d5f8f2d807c50ccc9ea264 326 SUPERFAMILY SSF53613 5 301 7.48E-64 T 14-10-2018 IPR029056 Ribokinase-like TMO_0421 f8047faa08d5f8f2d807c50ccc9ea264 326 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_0421 f8047faa08d5f8f2d807c50ccc9ea264 326 PIRSF PIRSF000535 2 315 1.4E-85 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 TMO_0421 f8047faa08d5f8f2d807c50ccc9ea264 326 Pfam PF00294 pfkB family carbohydrate kinase 10 295 1.8E-51 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB TMO_0421 f8047faa08d5f8f2d807c50ccc9ea264 326 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 313 7.6E-95 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 TMO_0421 f8047faa08d5f8f2d807c50ccc9ea264 326 Gene3D G3DSA:3.40.1190.20 2 315 3.1E-94 T 14-10-2018 IPR029056 Ribokinase-like TMO_0421 f8047faa08d5f8f2d807c50ccc9ea264 326 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 313 5.2E-95 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 TMO_1330 b3677e8d2e230db164d2a89ac6577fee 689 Gene3D G3DSA:2.170.130.10 59 181 3.7E-33 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_1330 b3677e8d2e230db164d2a89ac6577fee 689 SUPERFAMILY SSF56935 59 689 5.86E-117 T 14-10-2018 TMO_1330 b3677e8d2e230db164d2a89ac6577fee 689 Pfam PF00593 TonB dependent receptor 287 688 1.1E-60 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_1330 b3677e8d2e230db164d2a89ac6577fee 689 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 58 689 4.4E-161 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 TMO_1330 b3677e8d2e230db164d2a89ac6577fee 689 Gene3D G3DSA:2.40.170.20 184 689 2.2E-129 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_1330 b3677e8d2e230db164d2a89ac6577fee 689 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 61 689 1.2E-109 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 TMO_1330 b3677e8d2e230db164d2a89ac6577fee 689 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 176 2.4E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_0824 170ded1ca612df82c75ff7195189d352 355 SUPERFAMILY SSF46785 19 118 3.05E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0824 170ded1ca612df82c75ff7195189d352 355 Gene3D G3DSA:3.40.50.150 122 309 1.1E-37 T 14-10-2018 TMO_0824 170ded1ca612df82c75ff7195189d352 355 Pfam PF01022 Bacterial regulatory protein, arsR family 32 76 1.2E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0824 170ded1ca612df82c75ff7195189d352 355 Gene3D G3DSA:1.10.10.10 7 109 9.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0824 170ded1ca612df82c75ff7195189d352 355 SMART SM00418 24 103 6.3E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0824 170ded1ca612df82c75ff7195189d352 355 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 26 41 1.2E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0824 170ded1ca612df82c75ff7195189d352 355 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 56 1.2E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0824 170ded1ca612df82c75ff7195189d352 355 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 1.2E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0824 170ded1ca612df82c75ff7195189d352 355 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 1.2E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0824 170ded1ca612df82c75ff7195189d352 355 Pfam PF08241 Methyltransferase domain 171 267 8.1E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TMO_0824 170ded1ca612df82c75ff7195189d352 355 SUPERFAMILY SSF53335 125 319 9.32E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 370 452 3.4E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 622 702 1.6E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 117 135 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 763 857 7.72E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 355 373 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 PRINTS PR00313 NodO calcium binding signature 284 293 6.1E-9 T 14-10-2018 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 PRINTS PR00313 NodO calcium binding signature 112 120 6.1E-9 T 14-10-2018 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 PRINTS PR00313 NodO calcium binding signature 37 48 6.1E-9 T 14-10-2018 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 PRINTS PR00313 NodO calcium binding signature 130 138 6.1E-9 T 14-10-2018 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1037 1054 0.015 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1073 1090 0.11 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 424 440 0.54 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 341 357 0.27 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 692 707 0.32 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 972 988 0.0025 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 590 606 0.023 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 514 531 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 954 969 0.013 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 147 164 1.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 572 588 0.11 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 806 822 6.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 257 273 1.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 823 839 1.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 275 289 6.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 359 374 37.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 22 38 0.19 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 896 913 0.21 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 674 690 0.042 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 709 726 0.034 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 4 20 34.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 39 55 0.68 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 727 743 0.33 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 878 895 7.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1056 1072 0.0034 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 441 457 0.19 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 322 339 9.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 111 128 0.18 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 173 182 68.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 93 107 13.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 129 146 0.011 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 655 672 0.12 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 405 422 0.095 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1061 1079 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 762 873 5.7E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 1 87 1.2E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 429 447 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 88 147 1.7E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 1032 1194 2.0E-28 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 949 1031 7.1E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 641 765 3.35E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 262 280 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 27 45 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 874 948 4.1E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 271 289 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 36 54 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF08548 Peptidase M10 serralysin C terminal 1031 1178 1.8E-10 T 14-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 2 70 1.7E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 286 369 2.3E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 453 543 4.4E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 189 285 6.0E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 438 456 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 572 649 6.93E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 281 388 8.76E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 92 219 1.11E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 872 946 4.19E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 902 920 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 595 613 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 703 759 6.0E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 544 621 1.2E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 997 1174 3.66E-23 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 450 565 1.14E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 361 468 9.16E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1314 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 977 995 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1254 f8f74b6d4e499a70a0af165127cb54a7 312 SMART SM00267 128 306 9.3E-59 T 14-10-2018 IPR000160 GGDEF domain TMO_1254 f8f74b6d4e499a70a0af165127cb54a7 312 Pfam PF08448 PAS fold 19 123 3.7E-13 T 14-10-2018 IPR013656 PAS fold-4 TMO_1254 f8f74b6d4e499a70a0af165127cb54a7 312 SMART SM00091 13 81 6.6E-5 T 14-10-2018 IPR000014 PAS domain TMO_1254 f8f74b6d4e499a70a0af165127cb54a7 312 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 128 1.7E-14 T 14-10-2018 IPR000014 PAS domain TMO_1254 f8f74b6d4e499a70a0af165127cb54a7 312 SUPERFAMILY SSF55073 144 305 1.88E-44 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_1254 f8f74b6d4e499a70a0af165127cb54a7 312 Gene3D G3DSA:3.30.450.20 14 125 6.0E-18 T 14-10-2018 TMO_1254 f8f74b6d4e499a70a0af165127cb54a7 312 Gene3D G3DSA:3.30.70.270 126 306 4.4E-57 T 14-10-2018 TMO_1254 f8f74b6d4e499a70a0af165127cb54a7 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 141 302 8.3E-45 T 14-10-2018 IPR000160 GGDEF domain TMO_1254 f8f74b6d4e499a70a0af165127cb54a7 312 SUPERFAMILY SSF55785 17 113 1.77E-15 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1254 f8f74b6d4e499a70a0af165127cb54a7 312 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 136 304 5.4E-48 T 14-10-2018 IPR000160 GGDEF domain TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 7 587 7.8E-245 T 14-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 Pfam PF07732 Multicopper oxidase 54 155 5.8E-35 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 Gene3D G3DSA:2.60.40.420 161 363 6.4E-41 T 14-10-2018 IPR008972 Cupredoxin TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 Pfam PF07731 Multicopper oxidase 469 588 8.0E-27 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 SUPERFAMILY SSF49503 443 586 6.04E-36 T 14-10-2018 IPR008972 Cupredoxin TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 Gene3D G3DSA:2.60.40.420 30 154 8.6E-35 T 14-10-2018 IPR008972 Cupredoxin TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 ProSitePatterns PS00079 Multicopper oxidases signature 1. 564 584 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 SUPERFAMILY SSF49503 159 372 2.14E-60 T 14-10-2018 IPR008972 Cupredoxin TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 Pfam PF00394 Multicopper oxidase 217 337 2.2E-28 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 Gene3D G3DSA:2.60.40.420 465 591 1.9E-30 T 14-10-2018 IPR008972 Cupredoxin TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 ProSitePatterns PS00080 Multicopper oxidases signature 2. 569 580 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 TMO_2235 ca7ba37d9fccbc48e70d563d0757b88f 596 SUPERFAMILY SSF49503 47 186 1.1E-37 T 14-10-2018 IPR008972 Cupredoxin TMO_2983 1d993400b8ab6c7ae0c14e93ea826279 271 Pfam PF13668 Ferritin-like domain 34 162 4.2E-5 T 14-10-2018 TMO_2983 1d993400b8ab6c7ae0c14e93ea826279 271 Gene3D G3DSA:1.10.620.20 3 197 1.9E-17 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 TMO_2983 1d993400b8ab6c7ae0c14e93ea826279 271 SUPERFAMILY SSF47240 1 251 5.08E-42 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_1612 49b0d7179e62071c7656f5287a176903 418 SUPERFAMILY SSF53686 8 316 6.16E-88 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_1612 49b0d7179e62071c7656f5287a176903 418 Gene3D G3DSA:3.30.70.260 330 411 1.2E-5 T 14-10-2018 TMO_1612 49b0d7179e62071c7656f5287a176903 418 SUPERFAMILY SSF55021 332 397 8.33E-8 T 14-10-2018 TMO_1612 49b0d7179e62071c7656f5287a176903 418 Gene3D G3DSA:3.40.50.1100 55 151 1.2E-109 T 14-10-2018 TMO_1612 49b0d7179e62071c7656f5287a176903 418 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 308 3.5E-75 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_1612 49b0d7179e62071c7656f5287a176903 418 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 26 404 6.3E-128 T 14-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 TMO_1612 49b0d7179e62071c7656f5287a176903 418 Gene3D G3DSA:3.40.50.1100 12 313 1.2E-109 T 14-10-2018 TMO_c0384 171ef94a43b1993534906a408de9e87a 363 Gene3D G3DSA:1.20.120.920 86 362 3.7E-74 T 14-10-2018 TMO_c0384 171ef94a43b1993534906a408de9e87a 363 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 7 358 1.1E-73 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TMO_c0384 171ef94a43b1993534906a408de9e87a 363 TIGRFAM TIGR03640 cas1_DVULG: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG 4 361 2.1E-139 T 14-10-2018 IPR019856 CRISPR-associated protein Cas1, DVULG subtype GO:0004520|GO:0043571|GO:0046872 TMO_c0384 171ef94a43b1993534906a408de9e87a 363 Gene3D G3DSA:3.100.10.20 6 84 1.5E-15 T 14-10-2018 TMO_c0384 171ef94a43b1993534906a408de9e87a 363 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 348 26.859 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TMO_c0384 171ef94a43b1993534906a408de9e87a 363 Pfam PF01867 CRISPR associated protein Cas1 8 318 1.1E-98 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TMO_a0108 b72215c29d0ab746af640f25ace367f1 330 Gene3D G3DSA:3.40.50.1820 1 324 2.3E-83 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0108 b72215c29d0ab746af640f25ace367f1 330 Pfam PF07859 alpha/beta hydrolase fold 87 299 2.0E-64 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 TMO_a0108 b72215c29d0ab746af640f25ace367f1 330 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 87 102 - T 14-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 TMO_a0108 b72215c29d0ab746af640f25ace367f1 330 SUPERFAMILY SSF53474 53 320 1.64E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0108 b72215c29d0ab746af640f25ace367f1 330 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 - T 14-10-2018 IPR033140 Lipase, GDXG, putative serine active site TMO_1452 65e58c3016f49701bdbf5d118d4cb7fa 429 Gene3D G3DSA:1.10.287.470 102 248 2.1E-17 T 14-10-2018 TMO_1452 65e58c3016f49701bdbf5d118d4cb7fa 429 TIGRFAM TIGR03794 NHLM_micro_HlyD: NHLM bacteriocin system secretion protein 24 418 1.2E-68 T 14-10-2018 IPR022275 NHPM bacteriocin system secretion protein, HylD TMO_1452 65e58c3016f49701bdbf5d118d4cb7fa 429 Gene3D G3DSA:2.40.50.100 68 289 2.1E-17 T 14-10-2018 TMO_1452 65e58c3016f49701bdbf5d118d4cb7fa 429 Pfam PF13437 HlyD family secretion protein 248 343 1.8E-8 T 14-10-2018 TMO_1452 65e58c3016f49701bdbf5d118d4cb7fa 429 Gene3D G3DSA:2.40.30.170 57 334 2.1E-17 T 14-10-2018 TMO_c0325 2479576bd60adabe9f01b04e43f72f7f 298 SMART SM00342 213 296 1.9E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0325 2479576bd60adabe9f01b04e43f72f7f 298 Gene3D G3DSA:1.10.10.60 196 298 1.3E-31 T 14-10-2018 TMO_c0325 2479576bd60adabe9f01b04e43f72f7f 298 Pfam PF12833 Helix-turn-helix domain 219 297 2.4E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0325 2479576bd60adabe9f01b04e43f72f7f 298 SUPERFAMILY SSF46689 249 297 1.12E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0325 2479576bd60adabe9f01b04e43f72f7f 298 SUPERFAMILY SSF46689 197 247 2.42E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0325 2479576bd60adabe9f01b04e43f72f7f 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_1444 0767e10711246f21b00d9ce80737fb72 358 SUPERFAMILY SSF103481 61 163 4.45E-16 T 14-10-2018 TMO_1444 0767e10711246f21b00d9ce80737fb72 358 SUPERFAMILY SSF103481 230 331 1.57E-10 T 14-10-2018 TMO_1444 0767e10711246f21b00d9ce80737fb72 358 Pfam PF00892 EamA-like transporter family 33 160 1.9E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1444 0767e10711246f21b00d9ce80737fb72 358 Pfam PF00892 EamA-like transporter family 192 328 1.3E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3418 a9a3de8e61d3c222cb0e907e2cf3e0cb 274 SUPERFAMILY SSF52540 18 269 4.99E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3418 a9a3de8e61d3c222cb0e907e2cf3e0cb 274 Gene3D G3DSA:3.40.50.300 13 271 1.0E-83 T 14-10-2018 TMO_3418 a9a3de8e61d3c222cb0e907e2cf3e0cb 274 Pfam PF13614 AAA domain 18 194 2.6E-60 T 14-10-2018 IPR025669 AAA domain TMO_2225 cc9fa08e831db5c895d1b9cf0881f87d 718 SMART SM00470 14 118 3.8E-9 T 14-10-2018 IPR003115 ParB/Sulfiredoxin TMO_2225 cc9fa08e831db5c895d1b9cf0881f87d 718 SUPERFAMILY SSF110849 15 120 5.41E-13 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TMO_2225 cc9fa08e831db5c895d1b9cf0881f87d 718 Gene3D G3DSA:3.90.1530.30 28 102 5.7E-8 T 14-10-2018 TMO_2225 cc9fa08e831db5c895d1b9cf0881f87d 718 SUPERFAMILY SSF109709 111 206 1.57E-21 T 14-10-2018 TMO_2225 cc9fa08e831db5c895d1b9cf0881f87d 718 Pfam PF02195 ParB-like nuclease domain 16 117 3.4E-9 T 14-10-2018 IPR003115 ParB/Sulfiredoxin TMO_2225 cc9fa08e831db5c895d1b9cf0881f87d 718 Gene3D G3DSA:1.10.10.2830 107 216 1.2E-15 T 14-10-2018 TMO_1422 61e73d4bc6489a02f671be06ae9021c7 771 Gene3D G3DSA:2.40.40.20 599 761 1.0E-51 T 14-10-2018 TMO_1422 61e73d4bc6489a02f671be06ae9021c7 771 SUPERFAMILY SSF50692 617 764 1.29E-44 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TMO_1422 61e73d4bc6489a02f671be06ae9021c7 771 Pfam PF00384 Molybdopterin oxidoreductase 53 507 1.1E-65 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1422 61e73d4bc6489a02f671be06ae9021c7 771 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 452 469 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TMO_1422 61e73d4bc6489a02f671be06ae9021c7 771 Gene3D G3DSA:3.90.55.10 10 557 2.9E-193 T 14-10-2018 TMO_1422 61e73d4bc6489a02f671be06ae9021c7 771 Gene3D G3DSA:3.40.228.10 146 590 2.9E-193 T 14-10-2018 TMO_1422 61e73d4bc6489a02f671be06ae9021c7 771 Gene3D G3DSA:3.40.50.740 53 516 2.9E-193 T 14-10-2018 TMO_1422 61e73d4bc6489a02f671be06ae9021c7 771 Pfam PF01568 Molydopterin dinucleotide binding domain 624 744 3.7E-25 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TMO_1422 61e73d4bc6489a02f671be06ae9021c7 771 SUPERFAMILY SSF53706 10 625 8.34E-152 T 14-10-2018 TMO_2247 2c5f8fba044e8cab22f5f248934e45cf 412 SUPERFAMILY SSF111369 66 313 8.63E-68 T 14-10-2018 TMO_2247 2c5f8fba044e8cab22f5f248934e45cf 412 Gene3D G3DSA:2.40.30.170 65 318 7.2E-96 T 14-10-2018 TMO_2247 2c5f8fba044e8cab22f5f248934e45cf 412 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 52 386 5.2E-83 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_2247 2c5f8fba044e8cab22f5f248934e45cf 412 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 75 308 2.2E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_2247 2c5f8fba044e8cab22f5f248934e45cf 412 Gene3D G3DSA:2.40.50.100 76 223 7.2E-96 T 14-10-2018 TMO_2247 2c5f8fba044e8cab22f5f248934e45cf 412 Gene3D G3DSA:2.40.420.20 319 385 7.2E-96 T 14-10-2018 TMO_2247 2c5f8fba044e8cab22f5f248934e45cf 412 Gene3D G3DSA:1.10.287.470 111 184 7.2E-96 T 14-10-2018 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 378 2.5E-46 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 SUPERFAMILY SSF56645 6 243 9.95E-80 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 SUPERFAMILY SSF47203 229 381 1.01E-52 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 Gene3D G3DSA:2.40.110.10 120 234 9.2E-44 T 14-10-2018 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 Gene3D G3DSA:1.20.140.10 235 381 1.4E-51 T 14-10-2018 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 9.7E-30 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 8.9E-30 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 PIRSF PIRSF016578 6 88 6.4E-6 T 14-10-2018 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 PIRSF PIRSF016578 102 381 1.4E-12 T 14-10-2018 TMO_0225 4067741fc7975fcaea48a1178e1d0313 384 Gene3D G3DSA:1.10.540.10 3 119 9.5E-31 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_2782 9d158f79e803b8ecd1589945808ef42a 160 Pfam PF00430 ATP synthase B/B' CF(0) 7 136 1.3E-23 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TMO_2782 9d158f79e803b8ecd1589945808ef42a 160 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 11.187 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TMO_2307 e669090266eea4da1005dda6f258a6cc 230 SUPERFAMILY SSF48498 95 221 1.69E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_2307 e669090266eea4da1005dda6f258a6cc 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 64 3.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2307 e669090266eea4da1005dda6f258a6cc 230 Gene3D G3DSA:1.10.357.10 17 227 1.8E-52 T 14-10-2018 TMO_2307 e669090266eea4da1005dda6f258a6cc 230 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 62 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_2307 e669090266eea4da1005dda6f258a6cc 230 SUPERFAMILY SSF46689 10 86 9.23E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 Gene3D G3DSA:1.10.10.60 631 675 5.8E-11 T 14-10-2018 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 Gene3D G3DSA:1.10.8.60 544 616 1.7E-10 T 14-10-2018 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 582 591 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 SUPERFAMILY SSF46689 582 673 1.18E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 SUPERFAMILY SSF52540 373 612 3.66E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 458 473 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 637 654 9.0E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 654 674 9.0E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 Pfam PF02954 Bacterial regulatory protein, Fis family 635 671 3.8E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 Gene3D G3DSA:3.30.450.40 47 239 1.1E-42 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 396 409 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 SUPERFAMILY SSF55781 97 237 1.73E-9 T 14-10-2018 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 SMART SM00382 392 535 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 Pfam PF00158 Sigma-54 interaction domain 374 536 1.3E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 Gene3D G3DSA:3.40.50.300 367 543 2.5E-55 T 14-10-2018 TMO_c0849 dbd216c40a22735ec5a35d645d92a278 681 Pfam PF01590 GAF domain 108 238 1.4E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_2283 1492cd3307c32cd75b6abf6229733a84 526 SUPERFAMILY SSF54862 118 392 3.56E-23 T 14-10-2018 TMO_2283 1492cd3307c32cd75b6abf6229733a84 526 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 398 523 1.1E-8 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain TMO_2283 1492cd3307c32cd75b6abf6229733a84 526 Pfam PF13746 4Fe-4S dicluster domain 303 361 5.4E-26 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_2283 1492cd3307c32cd75b6abf6229733a84 526 Pfam PF13746 4Fe-4S dicluster domain 221 259 6.7E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_2283 1492cd3307c32cd75b6abf6229733a84 526 Pfam PF12801 4Fe-4S binding domain 109 147 1.3E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_2283 1492cd3307c32cd75b6abf6229733a84 526 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 309 320 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 Gene3D G3DSA:1.25.40.10 257 347 4.8E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 SMART SM00028 374 407 81.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 SMART SM00028 515 548 210.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 SMART SM00028 308 352 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 SMART SM00028 412 445 7.1E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 SMART SM00028 42 75 50.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 SMART SM00028 446 480 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 SMART SM00028 481 514 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 SUPERFAMILY SSF48452 380 545 2.97E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 Pfam PF13428 Tetratricopeptide repeat 215 256 3.6E-5 T 14-10-2018 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 Pfam PF13414 TPR repeat 490 529 3.9E-9 T 14-10-2018 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 Pfam PF13432 Tetratricopeptide repeat 301 334 0.0063 T 14-10-2018 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 Pfam PF13432 Tetratricopeptide repeat 379 446 4.5E-9 T 14-10-2018 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 SUPERFAMILY SSF48452 46 246 1.02E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 SUPERFAMILY SSF48452 216 402 8.35E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 Gene3D G3DSA:1.25.40.10 45 256 1.3E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 Gene3D G3DSA:1.25.40.10 348 461 7.6E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0179 7f1b865c993874ce425b8ed8828b567b 579 Gene3D G3DSA:1.25.40.10 462 561 2.2E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_1962 4e45795ce4e30140ba82c55688a92943 554 Pfam PF00753 Metallo-beta-lactamase superfamily 31 177 1.1E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_1962 4e45795ce4e30140ba82c55688a92943 554 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 362 404 3.8E-9 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain TMO_1962 4e45795ce4e30140ba82c55688a92943 554 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 365 393 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site TMO_1962 4e45795ce4e30140ba82c55688a92943 554 Gene3D G3DSA:3.60.15.10 13 439 2.4E-159 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_1962 4e45795ce4e30140ba82c55688a92943 554 SUPERFAMILY SSF56281 11 423 6.03E-82 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_1962 4e45795ce4e30140ba82c55688a92943 554 SMART SM00849 21 217 8.6E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_1962 4e45795ce4e30140ba82c55688a92943 554 Gene3D G3DSA:3.40.50.10710 209 358 2.4E-159 T 14-10-2018 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 289 1.8E-102 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 PIRSF PIRSF001365 1 300 4.8E-93 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 Gene3D G3DSA:3.20.20.70 1 294 3.1E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 Pfam PF00701 Dihydrodipicolinate synthetase family 6 287 3.7E-96 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 SMART SM01130 5 292 1.8E-146 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 SUPERFAMILY SSF51569 5 292 2.41E-106 T 14-10-2018 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 290 65.201 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 166 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 4.2E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 4.2E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 4.2E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_1584 9645e4f2be7a8118305f4987776b0918 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 4.2E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_b0586 ea7d651e0f02785ea0f6127d313c60ab 346 Pfam PF13560 Helix-turn-helix domain 3 49 3.6E-6 T 14-10-2018 TMO_b0586 ea7d651e0f02785ea0f6127d313c60ab 346 SUPERFAMILY SSF52540 66 325 6.8E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0586 ea7d651e0f02785ea0f6127d313c60ab 346 Gene3D G3DSA:1.10.260.40 2 59 4.6E-7 T 14-10-2018 TMO_b0586 ea7d651e0f02785ea0f6127d313c60ab 346 SUPERFAMILY SSF47413 3 57 7.78E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_b0586 ea7d651e0f02785ea0f6127d313c60ab 346 Gene3D G3DSA:3.40.50.300 60 328 2.3E-62 T 14-10-2018 TMO_b0586 ea7d651e0f02785ea0f6127d313c60ab 346 Pfam PF13614 AAA domain 67 250 1.5E-45 T 14-10-2018 IPR025669 AAA domain TMO_b0560 8a29af89ec973a0b90f8078338f2a486 391 SUPERFAMILY SSF53901 13 381 9.87E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_b0560 8a29af89ec973a0b90f8078338f2a486 391 Pfam PF00108 Thiolase, N-terminal domain 6 184 2.2E-22 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_b0560 8a29af89ec973a0b90f8078338f2a486 391 Pfam PF02803 Thiolase, C-terminal domain 261 371 2.2E-10 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_b0560 8a29af89ec973a0b90f8078338f2a486 391 PIRSF PIRSF000429 1 386 3.7E-59 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_b0560 8a29af89ec973a0b90f8078338f2a486 391 Gene3D G3DSA:3.40.47.10 3 390 1.6E-102 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_b0061 40b7f1a970c4138876f6e989e851fc72 583 Gene3D G3DSA:3.40.50.970 1 179 2.5E-53 T 14-10-2018 TMO_b0061 40b7f1a970c4138876f6e989e851fc72 583 Gene3D G3DSA:3.40.50.970 369 566 6.4E-43 T 14-10-2018 TMO_b0061 40b7f1a970c4138876f6e989e851fc72 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 170 3.6E-53 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TMO_b0061 40b7f1a970c4138876f6e989e851fc72 583 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 438 457 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TMO_b0061 40b7f1a970c4138876f6e989e851fc72 583 Gene3D G3DSA:3.40.50.1220 193 368 1.0E-42 T 14-10-2018 TMO_b0061 40b7f1a970c4138876f6e989e851fc72 583 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 334 2.8E-32 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TMO_b0061 40b7f1a970c4138876f6e989e851fc72 583 SUPERFAMILY SSF52518 1 173 3.07E-50 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_b0061 40b7f1a970c4138876f6e989e851fc72 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 400 548 2.2E-28 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_b0061 40b7f1a970c4138876f6e989e851fc72 583 SUPERFAMILY SSF52518 374 566 3.79E-42 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_b0061 40b7f1a970c4138876f6e989e851fc72 583 SUPERFAMILY SSF52467 155 363 1.08E-38 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_b0286 016e7f18abd040812a8406ed59820c9a 333 Gene3D G3DSA:1.10.10.10 6 84 2.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0286 016e7f18abd040812a8406ed59820c9a 333 SUPERFAMILY SSF46785 6 89 1.21E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0286 016e7f18abd040812a8406ed59820c9a 333 SUPERFAMILY SSF53335 106 319 1.67E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_b0286 016e7f18abd040812a8406ed59820c9a 333 PIRSF PIRSF005739 229 329 2.3E-7 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 TMO_b0286 016e7f18abd040812a8406ed59820c9a 333 PIRSF PIRSF005739 2 212 8.8E-10 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 TMO_b0286 016e7f18abd040812a8406ed59820c9a 333 Pfam PF16864 Dimerisation domain 8 92 1.0E-23 T 14-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain TMO_b0286 016e7f18abd040812a8406ed59820c9a 333 Gene3D G3DSA:3.40.50.150 94 324 1.5E-48 T 14-10-2018 TMO_b0286 016e7f18abd040812a8406ed59820c9a 333 Pfam PF00891 O-methyltransferase 107 315 5.3E-27 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 TMO_1554 252007f2b65f6f9fa7d77b9c5d550843 455 Gene3D G3DSA:3.50.50.60 308 455 7.3E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1554 252007f2b65f6f9fa7d77b9c5d550843 455 Gene3D G3DSA:3.50.50.60 10 186 1.3E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1554 252007f2b65f6f9fa7d77b9c5d550843 455 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 12 450 35.646 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 TMO_1554 252007f2b65f6f9fa7d77b9c5d550843 455 SUPERFAMILY SSF51905 10 383 1.04E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1554 252007f2b65f6f9fa7d77b9c5d550843 455 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 353 376 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TMO_1554 252007f2b65f6f9fa7d77b9c5d550843 455 Pfam PF01134 Glucose inhibited division protein A 12 384 5.6E-107 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 TMO_1554 252007f2b65f6f9fa7d77b9c5d550843 455 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 11 448 2.5E-182 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 TMO_c0587 034fbf486063576bdffa1b53c532bca2 240 Gene3D G3DSA:1.20.910.10 8 236 2.1E-58 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_c0587 034fbf486063576bdffa1b53c532bca2 240 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 28 231 4.2E-42 T 14-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 TMO_c0587 034fbf486063576bdffa1b53c532bca2 240 SUPERFAMILY SSF48613 17 230 1.2E-63 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_c0587 034fbf486063576bdffa1b53c532bca2 240 Pfam PF03070 TENA/THI-4/PQQC family 29 232 2.0E-40 T 14-10-2018 IPR004305 Thiaminase-2/PQQC TMO_a0601 dbb7c43b6faecf6d58b048581fbca87a 162 SMART SM00116 10 57 0.7 T 14-10-2018 IPR000644 CBS domain TMO_a0601 dbb7c43b6faecf6d58b048581fbca87a 162 SMART SM00116 74 120 3.0E-4 T 14-10-2018 IPR000644 CBS domain TMO_a0601 dbb7c43b6faecf6d58b048581fbca87a 162 SUPERFAMILY SSF54631 1 116 1.52E-27 T 14-10-2018 TMO_a0601 dbb7c43b6faecf6d58b048581fbca87a 162 Pfam PF00571 CBS domain 67 116 1.7E-9 T 14-10-2018 IPR000644 CBS domain TMO_a0601 dbb7c43b6faecf6d58b048581fbca87a 162 Pfam PF00571 CBS domain 3 53 8.1E-9 T 14-10-2018 IPR000644 CBS domain TMO_a0601 dbb7c43b6faecf6d58b048581fbca87a 162 Gene3D G3DSA:3.10.580.10 1 131 7.4E-29 T 14-10-2018 TMO_2878 32c64ca6a6b087403ba396c275adda1c 245 Pfam PF07722 Peptidase C26 10 223 5.0E-57 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 TMO_2878 32c64ca6a6b087403ba396c275adda1c 245 SUPERFAMILY SSF52317 30 243 4.14E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_2878 32c64ca6a6b087403ba396c275adda1c 245 Gene3D G3DSA:3.40.50.880 7 245 2.8E-67 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_c0907 d0184341f390d80c84f04b09d05a3cc6 417 SUPERFAMILY SSF55031 202 303 3.89E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TMO_c0907 d0184341f390d80c84f04b09d05a3cc6 417 Gene3D G3DSA:3.30.70.360 202 317 4.0E-77 T 14-10-2018 TMO_c0907 d0184341f390d80c84f04b09d05a3cc6 417 Pfam PF07687 Peptidase dimerisation domain 200 298 1.4E-18 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain TMO_c0907 d0184341f390d80c84f04b09d05a3cc6 417 Pfam PF01546 Peptidase family M20/M25/M40 96 403 2.8E-27 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 TMO_c0907 d0184341f390d80c84f04b09d05a3cc6 417 SUPERFAMILY SSF53187 15 406 6.29E-54 T 14-10-2018 TMO_c0907 d0184341f390d80c84f04b09d05a3cc6 417 Gene3D G3DSA:3.40.630.10 29 394 4.0E-77 T 14-10-2018 TMO_0141 e51a030db00b126cfedcae34538b7897 306 SMART SM00830 16 97 3.6E-17 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TMO_0141 e51a030db00b126cfedcae34538b7897 306 SUPERFAMILY SSF48600 6 94 1.14E-15 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TMO_0141 e51a030db00b126cfedcae34538b7897 306 Pfam PF01817 Chorismate mutase type II 16 94 6.2E-16 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TMO_0141 e51a030db00b126cfedcae34538b7897 306 Gene3D G3DSA:1.20.59.10 9 96 2.7E-20 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TMO_1401 885e2687c99e178c82c5571b642e4006 397 Pfam PF02405 Permease MlaE 181 391 1.1E-72 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 TMO_1401 885e2687c99e178c82c5571b642e4006 397 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 151 393 3.5E-71 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria TMO_2565 0bd16c1f1475887298beec795675af57 293 Pfam PF00795 Carbon-nitrogen hydrolase 7 267 6.5E-56 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TMO_2565 0bd16c1f1475887298beec795675af57 293 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 6 283 1.7E-138 T 14-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 TMO_2565 0bd16c1f1475887298beec795675af57 293 Gene3D G3DSA:3.60.110.10 3 290 5.7E-114 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_2565 0bd16c1f1475887298beec795675af57 293 SUPERFAMILY SSF56317 5 283 8.37E-89 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_a0079 ca0ae8bee82d28be7e71e102d0650472 447 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 1.3E-161 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 TMO_a0079 ca0ae8bee82d28be7e71e102d0650472 447 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 1.9E-157 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 TMO_2944 0b4f2d5130f0690922a1936ee79ad182 171 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_2944 0b4f2d5130f0690922a1936ee79ad182 171 SUPERFAMILY SSF46785 25 163 1.85E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2944 0b4f2d5130f0690922a1936ee79ad182 171 Pfam PF13463 Winged helix DNA-binding domain 60 119 2.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2944 0b4f2d5130f0690922a1936ee79ad182 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 2.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2944 0b4f2d5130f0690922a1936ee79ad182 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 2.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2944 0b4f2d5130f0690922a1936ee79ad182 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 2.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2944 0b4f2d5130f0690922a1936ee79ad182 171 SMART SM00347 45 146 4.0E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2944 0b4f2d5130f0690922a1936ee79ad182 171 Gene3D G3DSA:1.10.10.10 25 164 9.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 Gene3D G3DSA:2.40.50.100 593 660 1.2E-20 T 14-10-2018 TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 Gene3D G3DSA:3.30.700.30 449 579 2.2E-22 T 14-10-2018 TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 SUPERFAMILY SSF52440 1 113 5.61E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 SUPERFAMILY SSF56059 83 348 5.83E-74 T 14-10-2018 TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 SUPERFAMILY SSF51246 331 445 1.05E-42 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 616 633 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 SUPERFAMILY SSF51230 581 660 1.31E-19 T 14-10-2018 IPR011053 Single hybrid motif TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 Pfam PF00364 Biotin-requiring enzyme 596 658 7.3E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-45 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 SMART SM00878 336 442 3.1E-61 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 5.0E-39 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.1E-84 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_2598 3f35e5cc847f4a4d5316677495ae9f27 660 Gene3D G3DSA:3.30.470.130 1 447 2.2E-206 T 14-10-2018 TMO_0042 0ac6c0fac78efe9d522ca2dd8b6ee7b0 784 SUPERFAMILY SSF51126 260 446 4.4E-13 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor TMO_0042 0ac6c0fac78efe9d522ca2dd8b6ee7b0 784 Pfam PF12708 Pectate lyase superfamily protein 264 346 2.3E-11 T 14-10-2018 IPR024535 Pectate lyase superfamily protein TMO_0042 0ac6c0fac78efe9d522ca2dd8b6ee7b0 784 Gene3D G3DSA:2.160.20.10 254 480 9.9E-19 T 14-10-2018 IPR012334 Pectin lyase fold TMO_0815 9528efc3d8b4bc82d78e530482621ef6 484 Gene3D G3DSA:3.10.580.10 17 148 2.1E-32 T 14-10-2018 TMO_0815 9528efc3d8b4bc82d78e530482621ef6 484 Pfam PF03445 Putative nucleotidyltransferase DUF294 169 304 2.2E-37 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 TMO_0815 9528efc3d8b4bc82d78e530482621ef6 484 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 342 474 8.3E-35 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding TMO_0815 9528efc3d8b4bc82d78e530482621ef6 484 SUPERFAMILY SSF54631 19 147 6.7E-29 T 14-10-2018 TMO_0815 9528efc3d8b4bc82d78e530482621ef6 484 SMART SM00116 94 142 4.2E-8 T 14-10-2018 IPR000644 CBS domain TMO_0815 9528efc3d8b4bc82d78e530482621ef6 484 SMART SM00116 28 76 3.2E-7 T 14-10-2018 IPR000644 CBS domain TMO_0815 9528efc3d8b4bc82d78e530482621ef6 484 Pfam PF00571 CBS domain 21 76 4.5E-12 T 14-10-2018 IPR000644 CBS domain TMO_0815 9528efc3d8b4bc82d78e530482621ef6 484 Pfam PF00571 CBS domain 88 141 6.8E-8 T 14-10-2018 IPR000644 CBS domain TMO_3156 59f05fefc9942f30414d3a54c524f761 178 Pfam PF04542 Sigma-70 region 2 21 88 3.2E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_3156 59f05fefc9942f30414d3a54c524f761 178 SUPERFAMILY SSF88946 6 95 1.62E-23 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_3156 59f05fefc9942f30414d3a54c524f761 178 Pfam PF08281 Sigma-70, region 4 118 170 6.5E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_3156 59f05fefc9942f30414d3a54c524f761 178 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 42 74 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_3156 59f05fefc9942f30414d3a54c524f761 178 Gene3D G3DSA:1.10.1740.10 1 84 3.4E-27 T 14-10-2018 TMO_3156 59f05fefc9942f30414d3a54c524f761 178 SUPERFAMILY SSF88659 109 175 2.24E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_3156 59f05fefc9942f30414d3a54c524f761 178 Gene3D G3DSA:1.10.10.10 95 175 6.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3156 59f05fefc9942f30414d3a54c524f761 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 174 3.2E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 SUPERFAMILY SSF103190 79 217 8.63E-14 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 SMART SM00387 519 633 1.1E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 522 632 1.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 PIRSF PIRSF036431 15 633 6.8E-182 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 Gene3D G3DSA:1.10.287.130 383 470 1.2E-16 T 14-10-2018 TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 SUPERFAMILY SSF47384 404 471 2.75E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 Pfam PF00512 His Kinase A (phospho-acceptor) domain 408 472 8.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 Gene3D G3DSA:3.30.565.10 476 633 1.8E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 591 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 630 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 577 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 610 5.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 SUPERFAMILY SSF55874 467 630 2.88E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 Gene3D G3DSA:3.30.450.20 210 314 8.6E-30 T 14-10-2018 TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 SMART SM00388 407 475 1.3E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0527 b9217beca808f80f0889aa66f3b2df22 633 Gene3D G3DSA:3.30.450.20 81 207 4.5E-35 T 14-10-2018 TMO_0022 58794cf781a2cad12042d11a9e2d88a9 166 Pfam PF12692 S-adenosyl-L-methionine methyltransferase 2 160 8.2E-56 T 14-10-2018 IPR025690 Methyltransferase, putative TMO_0022 58794cf781a2cad12042d11a9e2d88a9 166 Gene3D G3DSA:3.40.50.150 1 162 4.3E-68 T 14-10-2018 TMO_0185 00bab02398fbe1afffcbabadf63c6e64 1516 Pfam PF00310 Glutamine amidotransferases class-II 38 457 8.0E-156 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TMO_0185 00bab02398fbe1afffcbabadf63c6e64 1516 Gene3D G3DSA:2.160.20.60 1243 1514 1.2E-109 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 TMO_0185 00bab02398fbe1afffcbabadf63c6e64 1516 Pfam PF01645 Conserved region in glutamate synthase 829 1191 2.5E-156 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 TMO_0185 00bab02398fbe1afffcbabadf63c6e64 1516 Pfam PF04898 Glutamate synthase central domain 486 767 6.1E-94 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 TMO_0185 00bab02398fbe1afffcbabadf63c6e64 1516 Pfam PF01493 GXGXG motif 1269 1457 1.1E-79 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 TMO_0185 00bab02398fbe1afffcbabadf63c6e64 1516 Gene3D G3DSA:3.20.20.70 812 1233 2.3E-187 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_0185 00bab02398fbe1afffcbabadf63c6e64 1516 Gene3D G3DSA:3.20.20.70 466 811 7.2E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_0185 00bab02398fbe1afffcbabadf63c6e64 1516 SUPERFAMILY SSF51395 473 1228 1.05E-251 T 14-10-2018 TMO_0185 00bab02398fbe1afffcbabadf63c6e64 1516 Gene3D G3DSA:3.60.20.10 38 459 4.7E-160 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_0185 00bab02398fbe1afffcbabadf63c6e64 1516 SUPERFAMILY SSF56235 38 459 1.54E-143 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_0185 00bab02398fbe1afffcbabadf63c6e64 1516 SUPERFAMILY SSF69336 1243 1504 4.58E-93 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 TMO_2607 83f42d9072f1210e356f787287975f51 139 Gene3D G3DSA:3.90.1030.10 1 116 3.1E-49 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2607 83f42d9072f1210e356f787287975f51 139 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 1.6E-46 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2607 83f42d9072f1210e356f787287975f51 139 Pfam PF01196 Ribosomal protein L17 20 116 9.7E-38 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2607 83f42d9072f1210e356f787287975f51 139 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.178 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2607 83f42d9072f1210e356f787287975f51 139 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2607 83f42d9072f1210e356f787287975f51 139 SUPERFAMILY SSF64263 1 119 4.71E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_c0704 e336d0ec62a159963dbca3cc1df06484 1120 SMART SM00316 34 169 2.4E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 TMO_c0704 e336d0ec62a159963dbca3cc1df06484 1120 SUPERFAMILY SSF50249 36 175 1.8E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_c0704 e336d0ec62a159963dbca3cc1df06484 1120 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 474 6.0E-160 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 TMO_c0704 e336d0ec62a159963dbca3cc1df06484 1120 Pfam PF10150 Ribonuclease E/G family 171 441 2.7E-93 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 TMO_c0704 e336d0ec62a159963dbca3cc1df06484 1120 Pfam PF00575 S1 RNA binding domain 35 166 1.7E-5 T 14-10-2018 IPR003029 S1 domain GO:0003676 TMO_c0704 e336d0ec62a159963dbca3cc1df06484 1120 Hamap MF_00970 Ribonuclease E [rne]. 1 1117 32.071 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 TMO_c0704 e336d0ec62a159963dbca3cc1df06484 1120 Gene3D G3DSA:3.40.1260.20 451 555 1.7E-28 T 14-10-2018 TMO_0930 a20d4925fb15817cd0f1ed4f3c0fc320 123 SUPERFAMILY SSF52172 2 121 9.25E-38 T 14-10-2018 IPR011006 CheY-like superfamily TMO_0930 a20d4925fb15817cd0f1ed4f3c0fc320 123 Pfam PF00072 Response regulator receiver domain 6 117 1.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0930 a20d4925fb15817cd0f1ed4f3c0fc320 123 Gene3D G3DSA:3.40.50.12740 3 123 9.2E-40 T 14-10-2018 TMO_0930 a20d4925fb15817cd0f1ed4f3c0fc320 123 SMART SM00448 4 117 5.4E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2033 0ecb3fd1900d6b165a3fe9934ba5fcc8 262 Gene3D G3DSA:3.90.226.10 1 201 2.1E-64 T 14-10-2018 TMO_2033 0ecb3fd1900d6b165a3fe9934ba5fcc8 262 Gene3D G3DSA:1.10.12.10 202 261 1.6E-13 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_2033 0ecb3fd1900d6b165a3fe9934ba5fcc8 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 257 5.2E-52 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_2033 0ecb3fd1900d6b165a3fe9934ba5fcc8 262 SUPERFAMILY SSF52096 6 255 5.67E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_3538 55ca609d77757a85d6f4fece6e20116d 247 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 73 222 1.0E-33 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 TMO_3538 55ca609d77757a85d6f4fece6e20116d 247 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 29 247 26.583 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 TMO_3538 55ca609d77757a85d6f4fece6e20116d 247 Gene3D G3DSA:3.40.50.150 37 247 1.3E-54 T 14-10-2018 TMO_3538 55ca609d77757a85d6f4fece6e20116d 247 Pfam PF02390 Putative methyltransferase 74 237 4.9E-41 T 14-10-2018 TMO_3538 55ca609d77757a85d6f4fece6e20116d 247 SUPERFAMILY SSF53335 71 245 8.44E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0423 5f00b2275759ced09629aeebfecfa87f 234 Gene3D G3DSA:3.40.50.850 17 233 8.2E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_0423 5f00b2275759ced09629aeebfecfa87f 234 SUPERFAMILY SSF52499 18 224 7.59E-42 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_0423 5f00b2275759ced09629aeebfecfa87f 234 Pfam PF00857 Isochorismatase family 26 217 7.1E-28 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_2829 065ce3145cbb1d8df17170c2115325cb 455 Gene3D G3DSA:3.30.2290.10 5 232 1.4E-70 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal TMO_2829 065ce3145cbb1d8df17170c2115325cb 455 Pfam PF01523 Putative modulator of DNA gyrase 33 324 1.4E-54 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TMO_2829 065ce3145cbb1d8df17170c2115325cb 455 SUPERFAMILY SSF111283 15 454 3.4E-121 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TMO_c0166 632206a48113135ef5add86b1ba45121 261 Gene3D G3DSA:1.10.357.10 93 238 1.3E-12 T 14-10-2018 TMO_c0166 632206a48113135ef5add86b1ba45121 261 Gene3D G3DSA:1.10.10.60 16 92 8.5E-12 T 14-10-2018 TMO_c0166 632206a48113135ef5add86b1ba45121 261 ProSitePatterns PS01081 TetR-type HTH domain signature. 63 93 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_c0166 632206a48113135ef5add86b1ba45121 261 SUPERFAMILY SSF48498 122 201 2.34E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_c0166 632206a48113135ef5add86b1ba45121 261 Pfam PF00440 Bacterial regulatory proteins, tetR family 53 97 5.8E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0166 632206a48113135ef5add86b1ba45121 261 SUPERFAMILY SSF46689 47 112 1.45E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0341 6ee05c51b64cfe97c2e0fcd30ae94a69 803 Gene3D G3DSA:3.40.50.970 3 379 3.8E-79 T 14-10-2018 TMO_b0341 6ee05c51b64cfe97c2e0fcd30ae94a69 803 PIRSF PIRSF000156 2 800 9.4E-58 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 TMO_b0341 6ee05c51b64cfe97c2e0fcd30ae94a69 803 SUPERFAMILY SSF52518 18 379 3.93E-77 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_b0341 6ee05c51b64cfe97c2e0fcd30ae94a69 803 Gene3D G3DSA:3.40.50.970 411 645 9.6E-69 T 14-10-2018 TMO_b0341 6ee05c51b64cfe97c2e0fcd30ae94a69 803 SMART SM00861 419 627 4.2E-6 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_b0341 6ee05c51b64cfe97c2e0fcd30ae94a69 803 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 80 233 9.5E-12 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TMO_b0341 6ee05c51b64cfe97c2e0fcd30ae94a69 803 SUPERFAMILY SSF52922 644 799 4.38E-28 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_b0341 6ee05c51b64cfe97c2e0fcd30ae94a69 803 SUPERFAMILY SSF52518 412 638 5.99E-56 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_b0341 6ee05c51b64cfe97c2e0fcd30ae94a69 803 Gene3D G3DSA:3.40.50.920 653 798 5.9E-17 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_c0414 52914f1c15a0aed434c5e0b4a456e36a 198 Gene3D G3DSA:1.10.357.10 2 190 1.1E-53 T 14-10-2018 TMO_c0414 52914f1c15a0aed434c5e0b4a456e36a 198 SUPERFAMILY SSF46689 4 82 9.98E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0414 52914f1c15a0aed434c5e0b4a456e36a 198 SUPERFAMILY SSF48498 86 195 1.74E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_c0414 52914f1c15a0aed434c5e0b4a456e36a 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 53 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_c0414 52914f1c15a0aed434c5e0b4a456e36a 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.1E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0414 52914f1c15a0aed434c5e0b4a456e36a 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0414 52914f1c15a0aed434c5e0b4a456e36a 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1902 4e7375bc65571678d4b5d8c5efb7150e 505 Gene3D G3DSA:1.20.58.100 412 493 1.2E-5 T 14-10-2018 TMO_1902 4e7375bc65571678d4b5d8c5efb7150e 505 Gene3D G3DSA:3.90.700.10 238 345 3.3E-120 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_1902 4e7375bc65571678d4b5d8c5efb7150e 505 Gene3D G3DSA:3.50.50.60 16 390 3.3E-120 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1902 4e7375bc65571678d4b5d8c5efb7150e 505 SUPERFAMILY SSF46977 424 491 1.96E-8 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_1902 4e7375bc65571678d4b5d8c5efb7150e 505 Pfam PF00890 FAD binding domain 16 379 3.4E-74 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_1902 4e7375bc65571678d4b5d8c5efb7150e 505 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 342 364 4.2E-9 T 14-10-2018 TMO_1902 4e7375bc65571678d4b5d8c5efb7150e 505 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 4.2E-9 T 14-10-2018 TMO_1902 4e7375bc65571678d4b5d8c5efb7150e 505 SUPERFAMILY SSF51905 13 400 1.62E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1902 4e7375bc65571678d4b5d8c5efb7150e 505 SUPERFAMILY SSF56425 228 339 5.53E-31 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_c0773 21ea5f5e11135500f281e9ffafe4148b 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 448 5.1E-25 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_c0773 21ea5f5e11135500f281e9ffafe4148b 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 2.6E-11 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_c0773 21ea5f5e11135500f281e9ffafe4148b 598 SUPERFAMILY SSF47203 288 467 6.12E-46 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_c0773 21ea5f5e11135500f281e9ffafe4148b 598 SUPERFAMILY SSF56645 33 281 8.64E-61 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_c0773 21ea5f5e11135500f281e9ffafe4148b 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 4.1E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_c0773 21ea5f5e11135500f281e9ffafe4148b 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 467 591 1.1E-27 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain TMO_c0773 21ea5f5e11135500f281e9ffafe4148b 598 Gene3D G3DSA:2.40.110.10 160 283 4.4E-98 T 14-10-2018 TMO_c0773 21ea5f5e11135500f281e9ffafe4148b 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 3.3E-9 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria TMO_c0773 21ea5f5e11135500f281e9ffafe4148b 598 Gene3D G3DSA:1.10.540.10 47 159 4.4E-98 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_c0773 21ea5f5e11135500f281e9ffafe4148b 598 Gene3D G3DSA:1.20.140.10 284 446 4.4E-98 T 14-10-2018 TMO_2676 6bbd1c4ea09b39bf6ade617e3de8ab16 152 Gene3D G3DSA:3.30.420.270 62 131 1.1E-25 T 14-10-2018 TMO_2676 6bbd1c4ea09b39bf6ade617e3de8ab16 152 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 135 4.8E-61 T 14-10-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 TMO_2676 6bbd1c4ea09b39bf6ade617e3de8ab16 152 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 132 7.6E-28 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 465 482 2.4E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 482 502 2.4E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 SUPERFAMILY SSF55785 33 126 7.42E-12 T 14-10-2018 IPR035965 PAS domain superfamily TMO_2013 19b6d2c00309cc319808ec920c36192b 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 256 271 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 SUPERFAMILY SSF46689 383 501 5.38E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 SUPERFAMILY SSF52540 169 412 1.18E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2013 19b6d2c00309cc319808ec920c36192b 510 Pfam PF00989 PAS fold 34 127 2.3E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 Pfam PF02954 Bacterial regulatory protein, Fis family 459 497 1.8E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 Gene3D G3DSA:1.10.8.60 341 419 5.3E-21 T 14-10-2018 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 383 392 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_2013 19b6d2c00309cc319808ec920c36192b 510 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 193 206 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 SMART SM00382 189 334 8.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2013 19b6d2c00309cc319808ec920c36192b 510 Gene3D G3DSA:3.30.450.20 24 128 2.2E-14 T 14-10-2018 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 Gene3D G3DSA:1.10.10.60 444 503 7.4E-16 T 14-10-2018 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 Gene3D G3DSA:3.40.50.300 155 340 5.6E-66 T 14-10-2018 TMO_2013 19b6d2c00309cc319808ec920c36192b 510 Pfam PF00158 Sigma-54 interaction domain 170 336 1.3E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_0549 4313c41f25ef3acb5fe2a7c912670f03 145 Pfam PF03061 Thioesterase superfamily 28 110 1.1E-12 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_0549 4313c41f25ef3acb5fe2a7c912670f03 145 SUPERFAMILY SSF54637 9 143 7.09E-39 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0549 4313c41f25ef3acb5fe2a7c912670f03 145 Gene3D G3DSA:3.10.129.10 2 143 1.6E-48 T 14-10-2018 TMO_2450 3d6833dbb3a534ba7fcb976f8c4fee86 172 SUPERFAMILY SSF55826 19 165 1.83E-34 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TMO_2450 3d6833dbb3a534ba7fcb976f8c4fee86 172 Gene3D G3DSA:3.90.960.10 13 169 1.8E-43 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TMO_2450 3d6833dbb3a534ba7fcb976f8c4fee86 172 Pfam PF04073 Aminoacyl-tRNA editing domain 39 157 9.0E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_c0749 2066106270dd102fb04aed22ab929537 268 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0749 2066106270dd102fb04aed22ab929537 268 Pfam PF00005 ABC transporter 24 184 3.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0749 2066106270dd102fb04aed22ab929537 268 SUPERFAMILY SSF52540 7 256 4.15E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0749 2066106270dd102fb04aed22ab929537 268 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 256 5.9E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_c0749 2066106270dd102fb04aed22ab929537 268 SMART SM00382 32 255 1.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0749 2066106270dd102fb04aed22ab929537 268 Gene3D G3DSA:3.40.50.300 2 257 1.6E-62 T 14-10-2018 TMO_b0181 aae27a47aa96911a4be5a2b8f6ac6470 422 PIRSF PIRSF001235 17 422 3.0E-121 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 TMO_b0181 aae27a47aa96911a4be5a2b8f6ac6470 422 Gene3D G3DSA:3.30.70.360 227 339 1.0E-132 T 14-10-2018 TMO_b0181 aae27a47aa96911a4be5a2b8f6ac6470 422 Pfam PF07687 Peptidase dimerisation domain 224 303 2.4E-4 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain TMO_b0181 aae27a47aa96911a4be5a2b8f6ac6470 422 SUPERFAMILY SSF53187 15 421 4.19E-88 T 14-10-2018 TMO_b0181 aae27a47aa96911a4be5a2b8f6ac6470 422 Gene3D G3DSA:3.40.630.10 29 414 1.0E-132 T 14-10-2018 TMO_b0181 aae27a47aa96911a4be5a2b8f6ac6470 422 SUPERFAMILY SSF55031 227 332 5.68E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TMO_b0181 aae27a47aa96911a4be5a2b8f6ac6470 422 Pfam PF01546 Peptidase family M20/M25/M40 93 418 7.4E-35 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 TMO_b0181 aae27a47aa96911a4be5a2b8f6ac6470 422 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 21 418 6.9E-116 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 TMO_2890 c940bdb77ed8430b1f63a63959734d4e 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 66 74 2.4E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_2890 c940bdb77ed8430b1f63a63959734d4e 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 112 127 2.4E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_2890 c940bdb77ed8430b1f63a63959734d4e 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 148 164 2.4E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_2890 c940bdb77ed8430b1f63a63959734d4e 178 TIGRFAM TIGR00077 lspA: signal peptidase II 23 168 1.2E-32 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_2890 c940bdb77ed8430b1f63a63959734d4e 178 Pfam PF01252 Signal peptidase (SPase) II 29 168 1.6E-33 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_2890 c940bdb77ed8430b1f63a63959734d4e 178 ProSitePatterns PS00855 Signal peptidases II signature. 115 127 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_2890 c940bdb77ed8430b1f63a63959734d4e 178 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 19 173 15.37 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_3432 9ba4112a3003f7cee86b9c3ddfb97d2b 371 Pfam PF00925 GTP cyclohydrolase II 181 347 7.8E-63 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TMO_3432 9ba4112a3003f7cee86b9c3ddfb97d2b 371 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 182 371 2.8E-66 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TMO_3432 9ba4112a3003f7cee86b9c3ddfb97d2b 371 Gene3D G3DSA:3.40.50.10990 177 350 4.5E-69 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TMO_3432 9ba4112a3003f7cee86b9c3ddfb97d2b 371 PIRSF PIRSF001259 109 371 4.2E-71 T 14-10-2018 TMO_3432 9ba4112a3003f7cee86b9c3ddfb97d2b 371 PIRSF PIRSF001259 6 48 720.0 T 14-10-2018 TMO_3432 9ba4112a3003f7cee86b9c3ddfb97d2b 371 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 177 371 39.103 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TMO_3432 9ba4112a3003f7cee86b9c3ddfb97d2b 371 SUPERFAMILY SSF142695 179 348 1.31E-58 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TMO_3109 7779de6322e89f4404d919f7c21a40db 300 Pfam PF00753 Metallo-beta-lactamase superfamily 43 213 2.1E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_3109 7779de6322e89f4404d919f7c21a40db 300 Gene3D G3DSA:3.60.15.10 14 218 6.4E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_3109 7779de6322e89f4404d919f7c21a40db 300 SUPERFAMILY SSF56281 18 286 1.34E-52 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_3109 7779de6322e89f4404d919f7c21a40db 300 SMART SM00849 39 213 2.7E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_3109 7779de6322e89f4404d919f7c21a40db 300 Gene3D G3DSA:1.10.10.10 219 299 6.0E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1246 26bee88a2bb9015f0e2695a9f5d1cf82 568 PIRSF PIRSF004862 1 568 5.8E-142 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_1246 26bee88a2bb9015f0e2695a9f5d1cf82 568 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 31 458 2.9E-89 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_1246 26bee88a2bb9015f0e2695a9f5d1cf82 568 Pfam PF01514 Secretory protein of YscJ/FliF family 29 217 1.6E-68 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF TMO_1246 26bee88a2bb9015f0e2695a9f5d1cf82 568 PRINTS PR01009 Flagellar M-ring protein signature 150 164 5.2E-35 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_1246 26bee88a2bb9015f0e2695a9f5d1cf82 568 PRINTS PR01009 Flagellar M-ring protein signature 118 136 5.2E-35 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_1246 26bee88a2bb9015f0e2695a9f5d1cf82 568 PRINTS PR01009 Flagellar M-ring protein signature 266 284 5.2E-35 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_1246 26bee88a2bb9015f0e2695a9f5d1cf82 568 PRINTS PR01009 Flagellar M-ring protein signature 339 363 5.2E-35 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_1246 26bee88a2bb9015f0e2695a9f5d1cf82 568 PRINTS PR01009 Flagellar M-ring protein signature 193 211 5.2E-35 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_1246 26bee88a2bb9015f0e2695a9f5d1cf82 568 Gene3D G3DSA:3.30.300.30 118 214 2.2E-12 T 14-10-2018 TMO_1246 26bee88a2bb9015f0e2695a9f5d1cf82 568 Pfam PF08345 Flagellar M-ring protein C-terminal 254 415 7.4E-42 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal TMO_2664 14281ea66a4ac29f7eaabb03ef6ced94 73 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 65 7.1E-11 T 14-10-2018 TMO_2664 14281ea66a4ac29f7eaabb03ef6ced94 73 Gene3D G3DSA:3.40.50.720 12 72 1.8E-12 T 14-10-2018 TMO_2664 14281ea66a4ac29f7eaabb03ef6ced94 73 SUPERFAMILY SSF51735 20 66 8.64E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0135 eed17b5c776da289601ec4c4cefcc4d5 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 34 123 1.5E-10 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_0135 eed17b5c776da289601ec4c4cefcc4d5 144 SUPERFAMILY SSF54637 16 143 3.73E-20 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0135 eed17b5c776da289601ec4c4cefcc4d5 144 Pfam PF03061 Thioesterase superfamily 60 131 7.5E-8 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_0135 eed17b5c776da289601ec4c4cefcc4d5 144 Gene3D G3DSA:3.10.129.10 2 144 8.5E-51 T 14-10-2018 TMO_2898 d7712c15a66c0c7ddead42afa383e57d 239 SUPERFAMILY SSF48498 115 230 2.31E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_2898 d7712c15a66c0c7ddead42afa383e57d 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 63 3.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2898 d7712c15a66c0c7ddead42afa383e57d 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 70 93 3.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2898 d7712c15a66c0c7ddead42afa383e57d 239 Gene3D G3DSA:1.10.10.60 40 92 3.0E-17 T 14-10-2018 TMO_2898 d7712c15a66c0c7ddead42afa383e57d 239 Pfam PF00440 Bacterial regulatory proteins, tetR family 50 95 1.5E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2898 d7712c15a66c0c7ddead42afa383e57d 239 Gene3D G3DSA:1.10.357.10 93 238 6.2E-39 T 14-10-2018 TMO_2898 d7712c15a66c0c7ddead42afa383e57d 239 SUPERFAMILY SSF46689 39 114 4.99E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2898 d7712c15a66c0c7ddead42afa383e57d 239 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 182 236 7.3E-18 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type TMO_0228 021f3abac7afb82963929e4886dabf55 189 Pfam PF00583 Acetyltransferase (GNAT) family 86 161 4.4E-10 T 14-10-2018 IPR000182 GNAT domain TMO_0228 021f3abac7afb82963929e4886dabf55 189 SUPERFAMILY SSF55729 19 163 4.29E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_0228 021f3abac7afb82963929e4886dabf55 189 Gene3D G3DSA:3.40.630.30 19 177 2.1E-21 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SUPERFAMILY SSF47226 1332 1468 3.27E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SUPERFAMILY SSF53850 51 269 5.96E-43 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Gene3D G3DSA:3.40.190.10 288 513 1.2E-42 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SUPERFAMILY SSF52172 1082 1211 4.98E-25 T 14-10-2018 IPR011006 CheY-like superfamily TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SMART SM00387 951 1067 2.2E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Gene3D G3DSA:3.30.450.20 701 819 4.5E-26 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Pfam PF00512 His Kinase A (phospho-acceptor) domain 840 904 3.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Pfam PF00989 PAS fold 704 815 3.5E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SUPERFAMILY SSF53850 288 514 1.31E-32 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Gene3D G3DSA:3.30.565.10 903 1066 3.6E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SMART SM00448 1232 1349 2.8E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SMART SM00448 1084 1206 2.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SMART SM00091 571 638 0.13 T 14-10-2018 IPR000014 PAS domain TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SMART SM00091 702 769 5.5E-10 T 14-10-2018 IPR000014 PAS domain TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Gene3D G3DSA:1.10.287.130 820 902 9.0E-29 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Gene3D G3DSA:3.40.190.10 40 267 4.6E-67 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Gene3D G3DSA:3.40.50.2300 1074 1212 2.8E-24 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 698 826 1.4E-21 T 14-10-2018 IPR000014 PAS domain TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SUPERFAMILY SSF55785 556 688 3.14E-13 T 14-10-2018 IPR035965 PAS domain superfamily TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SUPERFAMILY SSF55874 893 1061 5.76E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Pfam PF01627 Hpt domain 1400 1479 5.0E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SUPERFAMILY SSF55785 687 817 1.68E-26 T 14-10-2018 IPR035965 PAS domain superfamily TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 297 513 1.4E-18 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 951 1063 1.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 269 1.5E-31 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Gene3D G3DSA:3.40.190.10 381 476 1.2E-42 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Gene3D G3DSA:3.40.190.10 135 230 4.6E-67 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Gene3D G3DSA:1.20.120.160 1378 1487 2.3E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SMART SM00062 49 271 3.0E-27 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SMART SM00062 296 517 1.3E-16 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 992 1006 1.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1051 1064 1.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1010 1020 1.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1027 1045 1.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Gene3D G3DSA:3.30.450.20 556 700 9.7E-16 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SUPERFAMILY SSF47384 823 905 1.12E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SUPERFAMILY SSF52172 1228 1353 1.57E-36 T 14-10-2018 IPR011006 CheY-like superfamily TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Pfam PF12860 PAS fold 580 695 1.8E-13 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Gene3D G3DSA:3.40.50.2300 1224 1354 1.9E-38 T 14-10-2018 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Pfam PF00072 Response regulator receiver domain 1086 1206 2.3E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 Pfam PF00072 Response regulator receiver domain 1234 1349 5.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0028 820d6291fd83d87aeb1b2afeb24b32a7 1577 SMART SM00388 839 904 7.4E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0444 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 376 396 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TMO_0444 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 20 511 1.6E-201 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 TMO_0444 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 Gene3D G3DSA:3.30.420.40 268 513 4.8E-83 T 14-10-2018 TMO_0444 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 SUPERFAMILY SSF53067 269 512 1.77E-74 T 14-10-2018 TMO_0444 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 Hamap MF_00186 Glycerol kinase [glpK]. 18 514 52.933 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 TMO_0444 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 20 266 1.2E-70 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TMO_0444 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 PIRSF PIRSF000538 18 513 3.1E-163 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TMO_0444 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 276 467 6.3E-52 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TMO_0444 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 SUPERFAMILY SSF53067 21 269 1.48E-88 T 14-10-2018 TMO_0444 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 Gene3D G3DSA:3.30.420.40 19 267 3.3E-102 T 14-10-2018 TMO_d0028 e61ff5cdb8bd251cd5b8af18d65147d1 260 SUPERFAMILY SSF161098 3 244 1.83E-35 T 14-10-2018 IPR035906 MetI-like superfamily TMO_d0028 e61ff5cdb8bd251cd5b8af18d65147d1 260 Gene3D G3DSA:1.10.3720.10 1 255 1.8E-33 T 14-10-2018 IPR035906 MetI-like superfamily TMO_d0028 e61ff5cdb8bd251cd5b8af18d65147d1 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 241 9.1E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0991 87f7d5873580683294c4805cc87983ee 197 Gene3D G3DSA:1.10.340.30 10 194 4.6E-77 T 14-10-2018 TMO_0991 87f7d5873580683294c4805cc87983ee 197 SUPERFAMILY SSF48150 12 193 2.01E-74 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TMO_0991 87f7d5873580683294c4805cc87983ee 197 Pfam PF03352 Methyladenine glycosylase 14 189 1.1E-72 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 TMO_0991 87f7d5873580683294c4805cc87983ee 197 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 12 188 2.0E-73 T 14-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 TMO_1068 a7300a1a1797d20df4679ef771128c14 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 299 6.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1068 a7300a1a1797d20df4679ef771128c14 456 Gene3D G3DSA:1.10.287.130 187 297 1.6E-24 T 14-10-2018 TMO_1068 a7300a1a1797d20df4679ef771128c14 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 455 1.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1068 a7300a1a1797d20df4679ef771128c14 456 SMART SM00388 230 299 3.8E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1068 a7300a1a1797d20df4679ef771128c14 456 SUPERFAMILY SSF55874 288 456 4.06E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1068 a7300a1a1797d20df4679ef771128c14 456 SMART SM00387 345 456 2.7E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1068 a7300a1a1797d20df4679ef771128c14 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1068 a7300a1a1797d20df4679ef771128c14 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1068 a7300a1a1797d20df4679ef771128c14 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 456 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1068 a7300a1a1797d20df4679ef771128c14 456 Gene3D G3DSA:3.30.565.10 298 456 3.1E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1068 a7300a1a1797d20df4679ef771128c14 456 Pfam PF05227 CHASE3 domain 26 153 1.1E-6 T 14-10-2018 IPR007891 CHASE3 TMO_1068 a7300a1a1797d20df4679ef771128c14 456 SUPERFAMILY SSF47384 215 300 1.9E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_2349 04ac162ad547e333e70ee252e9021f17 244 SUPERFAMILY SSF64288 56 232 3.14E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_2349 04ac162ad547e333e70ee252e9021f17 244 SMART SM00866 89 226 5.7E-30 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_2349 04ac162ad547e333e70ee252e9021f17 244 SUPERFAMILY SSF46785 3 72 1.99E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2349 04ac162ad547e333e70ee252e9021f17 244 Gene3D G3DSA:1.10.10.10 1 69 1.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2349 04ac162ad547e333e70ee252e9021f17 244 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 231 1.3E-82 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 TMO_2349 04ac162ad547e333e70ee252e9021f17 244 Pfam PF07702 UTRA domain 90 226 1.2E-28 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_2349 04ac162ad547e333e70ee252e9021f17 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 2.4E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2349 04ac162ad547e333e70ee252e9021f17 244 SMART SM00345 9 68 2.6E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2349 04ac162ad547e333e70ee252e9021f17 244 Gene3D G3DSA:3.40.1410.10 87 222 3.6E-28 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_2349 04ac162ad547e333e70ee252e9021f17 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.9E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2349 04ac162ad547e333e70ee252e9021f17 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.9E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1311 4de2513f726e508008a86e3409490ece 504 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 269 361 7.6E-14 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain TMO_1311 4de2513f726e508008a86e3409490ece 504 Gene3D G3DSA:3.20.20.70 19 325 6.9E-44 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1311 4de2513f726e508008a86e3409490ece 504 TIGRFAM TIGR03913 rad_SAM_trio: Y_X(10)_GDL-associated radical SAM protein 18 491 1.9E-225 T 14-10-2018 IPR023820 Radical SAM GDL-associated TMO_1311 4de2513f726e508008a86e3409490ece 504 Pfam PF13186 Iron-sulfur cluster-binding domain 269 334 5.5E-8 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain TMO_1311 4de2513f726e508008a86e3409490ece 504 Pfam PF04055 Radical SAM superfamily 32 186 2.6E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_1311 4de2513f726e508008a86e3409490ece 504 SMART SM00729 27 228 1.3E-5 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_1311 4de2513f726e508008a86e3409490ece 504 SUPERFAMILY SSF102114 20 344 1.83E-64 T 14-10-2018 TMO_1019 d990bebca0b119810fd096c32dc31267 165 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 138 4.4E-34 T 14-10-2018 TMO_1019 d990bebca0b119810fd096c32dc31267 165 PIRSF PIRSF000216 6 145 1.6E-35 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1019 d990bebca0b119810fd096c32dc31267 165 Gene3D G3DSA:3.40.30.10 78 163 2.1E-12 T 14-10-2018 TMO_1019 d990bebca0b119810fd096c32dc31267 165 Gene3D G3DSA:1.10.10.1590 10 74 1.1E-13 T 14-10-2018 TMO_1019 d990bebca0b119810fd096c32dc31267 165 SUPERFAMILY SSF52833 22 140 1.79E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0831 d313d060586955a7101b6102dd8aee55 729 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 31 552 1.2E-265 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TMO_c0831 d313d060586955a7101b6102dd8aee55 729 Gene3D G3DSA:3.20.20.240 31 547 5.7E-231 T 14-10-2018 TMO_c0831 d313d060586955a7101b6102dd8aee55 729 SUPERFAMILY SSF52242 559 713 4.32E-53 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TMO_c0831 d313d060586955a7101b6102dd8aee55 729 Pfam PF01642 Methylmalonyl-CoA mutase 33 544 2.4E-230 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TMO_c0831 d313d060586955a7101b6102dd8aee55 729 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 585 712 3.0E-56 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TMO_c0831 d313d060586955a7101b6102dd8aee55 729 Pfam PF02310 B12 binding domain 588 703 2.0E-14 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TMO_c0831 d313d060586955a7101b6102dd8aee55 729 Gene3D G3DSA:3.40.50.280 551 714 1.9E-47 T 14-10-2018 TMO_c0831 d313d060586955a7101b6102dd8aee55 729 SUPERFAMILY SSF51703 27 547 5.49E-211 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TMO_a0512 322f8dfe5ff6c59ca65126d4c495a856 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 417 495 1.7E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0512 322f8dfe5ff6c59ca65126d4c495a856 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_a0512 322f8dfe5ff6c59ca65126d4c495a856 513 SUPERFAMILY SSF56801 5 507 2.62E-116 T 14-10-2018 TMO_a0512 322f8dfe5ff6c59ca65126d4c495a856 513 Pfam PF00501 AMP-binding enzyme 6 408 1.3E-62 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0512 322f8dfe5ff6c59ca65126d4c495a856 513 Gene3D G3DSA:3.40.50.12780 1 400 4.3E-87 T 14-10-2018 TMO_a0512 322f8dfe5ff6c59ca65126d4c495a856 513 Gene3D G3DSA:3.30.300.310 404 511 2.5E-27 T 14-10-2018 TMO_c0716 6c07c43fad0effa3e02b01a2923331e7 327 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 8.8E-41 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 TMO_c0716 6c07c43fad0effa3e02b01a2923331e7 327 Gene3D G3DSA:3.90.850.10 1 327 9.4E-138 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_c0716 6c07c43fad0effa3e02b01a2923331e7 327 SUPERFAMILY SSF56529 77 325 5.89E-59 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_0676 4986cdef57f22932431a86e635c98657 331 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 56 265 1.4E-37 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TMO_0676 4986cdef57f22932431a86e635c98657 331 Gene3D G3DSA:3.40.50.2300 133 317 2.3E-68 T 14-10-2018 TMO_0676 4986cdef57f22932431a86e635c98657 331 Gene3D G3DSA:3.40.50.2300 46 290 2.3E-68 T 14-10-2018 TMO_0676 4986cdef57f22932431a86e635c98657 331 SUPERFAMILY SSF53822 41 229 9.42E-6 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 Pfam PF01624 MutS domain I 25 142 4.3E-42 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 SMART SM00533 309 625 1.2E-74 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 PIRSF PIRSF037677 15 854 4.1E-149 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 Gene3D G3DSA:3.30.420.110 150 284 7.0E-28 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 Gene3D G3DSA:1.10.1420.10 292 593 3.3E-81 T 14-10-2018 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 SUPERFAMILY SSF52540 601 844 1.01E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 SUPERFAMILY SSF48334 293 599 5.1E-74 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 Gene3D G3DSA:3.40.1170.10 16 144 7.3E-49 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 Pfam PF05188 MutS domain II 153 278 7.2E-24 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 SUPERFAMILY SSF53150 140 306 1.31E-37 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 735 751 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 SUPERFAMILY SSF55271 18 138 8.5E-41 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 24 909 23.552 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 Pfam PF05190 MutS family domain IV 461 551 4.8E-23 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 Pfam PF00488 MutS domain V 657 843 8.8E-83 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 Gene3D G3DSA:1.10.1420.10 417 537 3.3E-81 T 14-10-2018 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 25 914 5.3E-253 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 SMART SM00534 654 841 2.3E-107 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 Pfam PF05192 MutS domain III 295 593 3.0E-37 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TMO_3501 a4bed916f1a56e340dfc8d1bf6746d6c 937 Gene3D G3DSA:3.40.50.300 602 858 7.0E-93 T 14-10-2018 TMO_1664 618440c1882f544f8104bd5a5b04e0ee 311 SUPERFAMILY SSF54631 267 309 9.04E-5 T 14-10-2018 TMO_1664 618440c1882f544f8104bd5a5b04e0ee 311 Gene3D G3DSA:3.40.50.300 3 257 3.3E-78 T 14-10-2018 TMO_1664 618440c1882f544f8104bd5a5b04e0ee 311 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1664 618440c1882f544f8104bd5a5b04e0ee 311 SUPERFAMILY SSF52540 3 240 4.52E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1664 618440c1882f544f8104bd5a5b04e0ee 311 Pfam PF00005 ABC transporter 20 165 2.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1664 618440c1882f544f8104bd5a5b04e0ee 311 SMART SM00382 28 223 1.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1904 1a2f65183d934b09c255caed7fcd2fc7 254 Gene3D G3DSA:3.30.450.20 19 151 4.7E-14 T 14-10-2018 TMO_1904 1a2f65183d934b09c255caed7fcd2fc7 254 SUPERFAMILY SSF109604 170 224 5.76E-10 T 14-10-2018 TMO_1904 1a2f65183d934b09c255caed7fcd2fc7 254 SUPERFAMILY SSF55785 24 138 6.81E-11 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1904 1a2f65183d934b09c255caed7fcd2fc7 254 Pfam PF01966 HD domain 184 227 5.4E-5 T 14-10-2018 IPR006674 HD domain TMO_1904 1a2f65183d934b09c255caed7fcd2fc7 254 Pfam PF08448 PAS fold 31 141 5.3E-14 T 14-10-2018 IPR013656 PAS fold-4 TMO_1904 1a2f65183d934b09c255caed7fcd2fc7 254 Gene3D G3DSA:1.10.3210.10 166 234 8.1E-15 T 14-10-2018 TMO_0188 d6156017bb8c919ac646bc517dee2cdc 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 142 198 3.6E-6 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal TMO_0188 d6156017bb8c919ac646bc517dee2cdc 222 Gene3D G3DSA:3.40.30.10 4 222 3.3E-83 T 14-10-2018 TMO_0188 d6156017bb8c919ac646bc517dee2cdc 222 SUPERFAMILY SSF47616 70 212 1.53E-25 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_0188 d6156017bb8c919ac646bc517dee2cdc 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 78 4.1E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_0188 d6156017bb8c919ac646bc517dee2cdc 222 Gene3D G3DSA:1.20.1050.10 79 197 3.3E-83 T 14-10-2018 TMO_0188 d6156017bb8c919ac646bc517dee2cdc 222 SUPERFAMILY SSF52833 1 102 7.33E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 SUPERFAMILY SSF51735 21 263 7.06E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 22 206 0.0035 T 14-10-2018 TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 1.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 1.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 1.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 1.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 1.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 Gene3D G3DSA:3.40.50.720 13 269 9.5E-76 T 14-10-2018 TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 3.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 189 3.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 3.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0161 48d9592c6a8fec1e79716fd16a36c462 277 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 28 259 7.4E-56 T 14-10-2018 TMO_3088 b8638a60fa31a5369d0600ef68bb3ac2 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 251 1.1E-68 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_3088 b8638a60fa31a5369d0600ef68bb3ac2 257 Gene3D G3DSA:3.40.190.10 112 209 1.4E-77 T 14-10-2018 TMO_3088 b8638a60fa31a5369d0600ef68bb3ac2 257 Gene3D G3DSA:3.40.190.10 29 250 1.4E-77 T 14-10-2018 TMO_3088 b8638a60fa31a5369d0600ef68bb3ac2 257 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 8 250 8.4E-79 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 TMO_3088 b8638a60fa31a5369d0600ef68bb3ac2 257 SMART SM00062 26 253 1.0E-73 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_3088 b8638a60fa31a5369d0600ef68bb3ac2 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site TMO_3088 b8638a60fa31a5369d0600ef68bb3ac2 257 SUPERFAMILY SSF53850 9 254 3.19E-72 T 14-10-2018 TMO_1449 7f18e10047ccdc8f26f7853c71c18331 301 Gene3D G3DSA:3.40.190.10 166 268 3.4E-56 T 14-10-2018 TMO_1449 7f18e10047ccdc8f26f7853c71c18331 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1449 7f18e10047ccdc8f26f7853c71c18331 301 SUPERFAMILY SSF46785 6 111 2.93E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1449 7f18e10047ccdc8f26f7853c71c18331 301 SUPERFAMILY SSF53850 91 295 5.07E-41 T 14-10-2018 TMO_1449 7f18e10047ccdc8f26f7853c71c18331 301 Gene3D G3DSA:1.10.10.10 4 93 2.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1449 7f18e10047ccdc8f26f7853c71c18331 301 Gene3D G3DSA:3.40.190.10 94 292 3.4E-56 T 14-10-2018 TMO_1449 7f18e10047ccdc8f26f7853c71c18331 301 Pfam PF03466 LysR substrate binding domain 90 294 7.0E-37 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1028 a9a9d1cce7fd2913006cb52a815ac632 145 Pfam PF01042 Endoribonuclease L-PSP 32 140 2.8E-23 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 TMO_1028 a9a9d1cce7fd2913006cb52a815ac632 145 Gene3D G3DSA:3.30.1330.40 18 141 5.6E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TMO_1028 a9a9d1cce7fd2913006cb52a815ac632 145 SUPERFAMILY SSF55298 21 142 1.16E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TMO_c0002 4a3e34797e9e86d765034ff1a796854f 263 Pfam PF01695 IstB-like ATP binding protein 54 229 3.6E-57 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 TMO_c0002 4a3e34797e9e86d765034ff1a796854f 263 SMART SM00382 97 230 2.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0002 4a3e34797e9e86d765034ff1a796854f 263 Gene3D G3DSA:3.40.50.300 62 249 6.1E-40 T 14-10-2018 TMO_c0002 4a3e34797e9e86d765034ff1a796854f 263 PIRSF PIRSF003073 1 252 9.8E-75 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein TMO_c0002 4a3e34797e9e86d765034ff1a796854f 263 SUPERFAMILY SSF52540 94 232 5.13E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0806 4a3e34797e9e86d765034ff1a796854f 263 Pfam PF01695 IstB-like ATP binding protein 54 229 3.6E-57 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 TMO_0806 4a3e34797e9e86d765034ff1a796854f 263 SMART SM00382 97 230 2.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0806 4a3e34797e9e86d765034ff1a796854f 263 Gene3D G3DSA:3.40.50.300 62 249 6.1E-40 T 14-10-2018 TMO_0806 4a3e34797e9e86d765034ff1a796854f 263 PIRSF PIRSF003073 1 252 9.8E-75 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein TMO_0806 4a3e34797e9e86d765034ff1a796854f 263 SUPERFAMILY SSF52540 94 232 5.13E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0091 6f879e421ff7ffc3456bf4f5a48424ba 327 Gene3D G3DSA:3.40.50.720 9 322 4.5E-32 T 14-10-2018 TMO_0091 6f879e421ff7ffc3456bf4f5a48424ba 327 SUPERFAMILY SSF51735 9 288 4.08E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0091 6f879e421ff7ffc3456bf4f5a48424ba 327 Pfam PF13460 NAD(P)H-binding 13 112 1.2E-11 T 14-10-2018 IPR016040 NAD(P)-binding domain TMO_a0436 f8908ae9c49992fba07b436f40dda8bd 368 Gene3D G3DSA:3.40.190.170 56 365 3.0E-66 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_a0436 f8908ae9c49992fba07b436f40dda8bd 368 SUPERFAMILY SSF53850 165 297 1.63E-5 T 14-10-2018 TMO_a0436 f8908ae9c49992fba07b436f40dda8bd 368 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 67 348 1.6E-39 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_1040 c1a9465111e1d0062d6d448441428026 208 Gene3D G3DSA:1.10.357.10 72 192 3.3E-20 T 14-10-2018 TMO_1040 c1a9465111e1d0062d6d448441428026 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 7.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1040 c1a9465111e1d0062d6d448441428026 208 Gene3D G3DSA:1.10.10.60 1 65 5.6E-26 T 14-10-2018 TMO_1040 c1a9465111e1d0062d6d448441428026 208 SUPERFAMILY SSF48498 80 187 1.5E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1040 c1a9465111e1d0062d6d448441428026 208 SUPERFAMILY SSF46689 1 72 3.85E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0218 2aa336dcc4e6a5bf3bd9c0486e176c31 247 Pfam PF06276 Ferric iron reductase FhuF-like transporter 63 199 8.5E-17 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain TMO_b0218 2aa336dcc4e6a5bf3bd9c0486e176c31 247 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 219 240 5.1E-6 T 14-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 TMO_b0218 2aa336dcc4e6a5bf3bd9c0486e176c31 247 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 58 241 3.3E-40 T 14-10-2018 IPR008090 Ferric iron reductase TMO_2972 fb1815b5cd7606a2a022bc89be93fc2a 157 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 5 156 26.959 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 TMO_2972 fb1815b5cd7606a2a022bc89be93fc2a 157 PIRSF PIRSF004505 5 156 2.1E-41 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 TMO_2972 fb1815b5cd7606a2a022bc89be93fc2a 157 Pfam PF02590 Predicted SPOUT methyltransferase 5 155 8.0E-43 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 TMO_2972 fb1815b5cd7606a2a022bc89be93fc2a 157 Gene3D G3DSA:3.40.1280.10 2 156 7.9E-45 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_2972 fb1815b5cd7606a2a022bc89be93fc2a 157 SUPERFAMILY SSF75217 5 154 4.71E-42 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases TMO_c0737 39b03609d61792232cd078631669eb0b 240 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 6 177 5.6E-69 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TMO_c0737 39b03609d61792232cd078631669eb0b 240 SUPERFAMILY SSF55729 2 195 3.87E-78 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_c0737 39b03609d61792232cd078631669eb0b 240 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 240 83.703 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TMO_c0737 39b03609d61792232cd078631669eb0b 240 Gene3D G3DSA:3.40.630.70 34 199 4.2E-62 T 14-10-2018 TMO_c0737 39b03609d61792232cd078631669eb0b 240 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 9 198 6.0E-60 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TMO_c0100 414740be560c53df993b72e840bfadff 668 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 502 668 4.8E-15 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 TMO_c0100 414740be560c53df993b72e840bfadff 668 SUPERFAMILY SSF53187 34 310 3.14E-36 T 14-10-2018 TMO_c0100 414740be560c53df993b72e840bfadff 668 Pfam PF04389 Peptidase family M28 98 309 3.1E-24 T 14-10-2018 IPR007484 Peptidase M28 TMO_c0100 414740be560c53df993b72e840bfadff 668 Pfam PF03797 Autotransporter beta-domain 416 646 1.8E-33 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_c0100 414740be560c53df993b72e840bfadff 668 SMART SM00869 388 657 8.1E-27 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_c0100 414740be560c53df993b72e840bfadff 668 Gene3D G3DSA:3.40.630.10 41 348 2.6E-39 T 14-10-2018 TMO_c0100 414740be560c53df993b72e840bfadff 668 Gene3D G3DSA:2.40.128.130 362 668 1.9E-40 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_c0100 414740be560c53df993b72e840bfadff 668 SUPERFAMILY SSF103515 420 668 2.75E-33 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_0430 b77cf014865c0f0e1e916aeb3a9bc206 776 PIRSF PIRSF000144 2 763 0.0 T 14-10-2018 TMO_0430 b77cf014865c0f0e1e916aeb3a9bc206 776 Pfam PF01568 Molydopterin dinucleotide binding domain 646 753 5.9E-9 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TMO_0430 b77cf014865c0f0e1e916aeb3a9bc206 776 Gene3D G3DSA:3.40.50.740 122 562 6.1E-67 T 14-10-2018 TMO_0430 b77cf014865c0f0e1e916aeb3a9bc206 776 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 759 7.0E-282 T 14-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 TMO_0430 b77cf014865c0f0e1e916aeb3a9bc206 776 Gene3D G3DSA:3.40.228.10 181 403 6.1E-67 T 14-10-2018 TMO_0430 b77cf014865c0f0e1e916aeb3a9bc206 776 SUPERFAMILY SSF53706 49 639 9.95E-125 T 14-10-2018 TMO_0430 b77cf014865c0f0e1e916aeb3a9bc206 776 SUPERFAMILY SSF50692 638 759 7.23E-18 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TMO_0430 b77cf014865c0f0e1e916aeb3a9bc206 776 Pfam PF00384 Molybdopterin oxidoreductase 110 413 1.5E-27 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_a0378 1aa1569b8ce6cdfc63e001f544d32d85 250 Gene3D G3DSA:3.40.50.12500 6 247 3.7E-71 T 14-10-2018 TMO_a0378 1aa1569b8ce6cdfc63e001f544d32d85 250 PIRSF PIRSF015736 1 245 3.6E-49 T 14-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase TMO_a0378 1aa1569b8ce6cdfc63e001f544d32d85 250 Hamap MF_00943 Maleate isomerase [maiA]. 7 248 44.738 T 14-10-2018 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 TMO_2902 c18073a69100be89972977834f5cfc8c 191 Gene3D G3DSA:1.10.1740.10 10 92 1.4E-25 T 14-10-2018 TMO_2902 c18073a69100be89972977834f5cfc8c 191 SUPERFAMILY SSF88659 132 190 2.83E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_2902 c18073a69100be89972977834f5cfc8c 191 Gene3D G3DSA:1.10.10.10 104 191 2.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2902 c18073a69100be89972977834f5cfc8c 191 Pfam PF04542 Sigma-70 region 2 28 96 7.0E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_2902 c18073a69100be89972977834f5cfc8c 191 SUPERFAMILY SSF88946 6 109 1.53E-23 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_2902 c18073a69100be89972977834f5cfc8c 191 Pfam PF08281 Sigma-70, region 4 133 185 6.4E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_2902 c18073a69100be89972977834f5cfc8c 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 189 3.6E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_3180 a3453026910a4ae25f9f8ce26d78dca4 181 SUPERFAMILY SSF158442 26 170 2.75E-27 T 14-10-2018 IPR023380 DsbB-like superfamily TMO_3180 a3453026910a4ae25f9f8ce26d78dca4 181 Pfam PF02600 Disulfide bond formation protein DsbB 24 170 6.5E-28 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 TMO_3180 a3453026910a4ae25f9f8ce26d78dca4 181 PIRSF PIRSF033913 16 178 3.4E-27 T 14-10-2018 IPR024199 Uncharacterised conserved protein, DsbB-like TMO_3180 a3453026910a4ae25f9f8ce26d78dca4 181 Gene3D G3DSA:1.20.1550.10 19 178 3.3E-18 T 14-10-2018 IPR023380 DsbB-like superfamily TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 Gene3D G3DSA:3.90.1170.50 188 293 2.0E-10 T 14-10-2018 TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 Gene3D G3DSA:3.30.365.10 577 722 2.8E-38 T 14-10-2018 TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 Gene3D G3DSA:3.30.365.10 47 187 1.2E-19 T 14-10-2018 TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 SUPERFAMILY SSF56003 318 724 1.7E-120 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 SUPERFAMILY SSF56003 27 246 2.79E-41 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 Gene3D G3DSA:3.30.365.10 323 551 2.1E-65 T 14-10-2018 TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 Gene3D G3DSA:3.30.365.10 347 438 2.1E-65 T 14-10-2018 TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 591 672 2.3E-15 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 318 551 2.4E-37 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 51 183 7.4E-12 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 SMART SM01008 217 295 1.3E-16 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_b0195 33cfeba22c1ad15d1a834bd9fb8c6d1b 725 PIRSF PIRSF036389 2 725 2.0E-262 T 14-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related TMO_2408 efc6b268123eb02991dfad6fcdf88667 239 SUPERFAMILY SSF53901 6 116 1.15E-30 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2408 efc6b268123eb02991dfad6fcdf88667 239 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 4 237 3.8E-87 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_2408 efc6b268123eb02991dfad6fcdf88667 239 ProSitePatterns PS00737 Thiolases signature 2. 185 201 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 TMO_2408 efc6b268123eb02991dfad6fcdf88667 239 SUPERFAMILY SSF53901 118 237 1.19E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2408 efc6b268123eb02991dfad6fcdf88667 239 Pfam PF00108 Thiolase, N-terminal domain 5 109 6.2E-34 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_2408 efc6b268123eb02991dfad6fcdf88667 239 Pfam PF02803 Thiolase, C-terminal domain 117 237 1.1E-42 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_2408 efc6b268123eb02991dfad6fcdf88667 239 Gene3D G3DSA:3.40.47.10 45 122 4.3E-90 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2408 efc6b268123eb02991dfad6fcdf88667 239 Gene3D G3DSA:3.40.47.10 4 233 4.3E-90 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1876 55706855794d8db292d48636ed6a23d2 259 SMART SM00382 32 222 3.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1876 55706855794d8db292d48636ed6a23d2 259 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1876 55706855794d8db292d48636ed6a23d2 259 Gene3D G3DSA:3.40.50.300 8 255 4.3E-65 T 14-10-2018 TMO_1876 55706855794d8db292d48636ed6a23d2 259 Pfam PF00005 ABC transporter 23 172 1.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1876 55706855794d8db292d48636ed6a23d2 259 SUPERFAMILY SSF52540 6 236 2.72E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0415 504df6e6b11e7e67de54216f81860f68 230 Gene3D G3DSA:3.40.50.300 1 229 1.1E-59 T 14-10-2018 TMO_a0415 504df6e6b11e7e67de54216f81860f68 230 SUPERFAMILY SSF52540 2 220 8.85E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0415 504df6e6b11e7e67de54216f81860f68 230 Pfam PF00005 ABC transporter 17 156 8.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0415 504df6e6b11e7e67de54216f81860f68 230 SMART SM00382 26 205 6.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0415 504df6e6b11e7e67de54216f81860f68 230 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 PIRSF PIRSF500136 17 450 1.0E-125 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 PIRSF PIRSF000124 27 433 3.3E-45 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 Gene3D G3DSA:3.40.50.720 223 446 5.4E-47 T 14-10-2018 TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 SUPERFAMILY SSF51735 28 216 4.03E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 224 312 1.9E-21 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 28 202 3.4E-31 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 Gene3D G3DSA:3.40.50.720 13 219 4.6E-55 T 14-10-2018 TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 SUPERFAMILY SSF52413 335 438 9.02E-17 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 SUPERFAMILY SSF48179 223 314 4.59E-23 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 SMART SM00984 339 438 7.0E-17 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 339 436 6.0E-14 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TMO_0710 4609ccc1ee0c1b12a54ed47bf3c7bd97 450 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 27 418 3.0E-105 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TMO_0683 d04dc574f24b43054cff4167e9a5a74a 328 Gene3D G3DSA:3.90.25.10 174 304 9.5E-112 T 14-10-2018 TMO_0683 d04dc574f24b43054cff4167e9a5a74a 328 Gene3D G3DSA:3.40.50.720 3 317 9.5E-112 T 14-10-2018 TMO_0683 d04dc574f24b43054cff4167e9a5a74a 328 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 321 7.8E-114 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 TMO_0683 d04dc574f24b43054cff4167e9a5a74a 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 249 7.9E-39 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TMO_0683 d04dc574f24b43054cff4167e9a5a74a 328 SUPERFAMILY SSF51735 2 321 4.88E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0683 d04dc574f24b43054cff4167e9a5a74a 328 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 323 48.31 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 TMO_b0225 981a101b24bf393771133de12fd5bc24 425 SMART SM00387 317 425 1.5E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_b0225 981a101b24bf393771133de12fd5bc24 425 Gene3D G3DSA:3.30.565.10 281 425 8.8E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0225 981a101b24bf393771133de12fd5bc24 425 SUPERFAMILY SSF47384 203 276 2.75E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_b0225 981a101b24bf393771133de12fd5bc24 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 424 2.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_b0225 981a101b24bf393771133de12fd5bc24 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 220 276 1.4E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0225 981a101b24bf393771133de12fd5bc24 425 Gene3D G3DSA:1.10.287.130 166 273 5.6E-16 T 14-10-2018 TMO_b0225 981a101b24bf393771133de12fd5bc24 425 SUPERFAMILY SSF55874 277 424 6.16E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0225 981a101b24bf393771133de12fd5bc24 425 SMART SM00388 220 278 2.7E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0225 981a101b24bf393771133de12fd5bc24 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 365 5.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0225 981a101b24bf393771133de12fd5bc24 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 5.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0225 981a101b24bf393771133de12fd5bc24 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 379 5.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0225 981a101b24bf393771133de12fd5bc24 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 5.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2174 214ef016a99428429db5ce1f6e3135cb 1191 Pfam PF13086 AAA domain 651 851 8.4E-20 T 14-10-2018 TMO_2174 214ef016a99428429db5ce1f6e3135cb 1191 Gene3D G3DSA:1.10.510.10 69 243 1.2E-5 T 14-10-2018 TMO_2174 214ef016a99428429db5ce1f6e3135cb 1191 SUPERFAMILY SSF56112 37 229 3.84E-9 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_2174 214ef016a99428429db5ce1f6e3135cb 1191 Gene3D G3DSA:3.40.50.300 942 1164 1.0E-45 T 14-10-2018 TMO_2174 214ef016a99428429db5ce1f6e3135cb 1191 Gene3D G3DSA:3.40.50.300 577 881 5.0E-28 T 14-10-2018 TMO_2174 214ef016a99428429db5ce1f6e3135cb 1191 Pfam PF13087 AAA domain 933 1135 7.4E-41 T 14-10-2018 TMO_2174 214ef016a99428429db5ce1f6e3135cb 1191 SUPERFAMILY SSF52540 648 1165 1.82E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1271 1fcf6ac15c39405808277e563a379759 275 Gene3D G3DSA:3.30.2040.10 134 246 1.1E-90 T 14-10-2018 TMO_1271 1fcf6ac15c39405808277e563a379759 275 Pfam PF07286 Protein of unknown function (DUF1445) 124 266 3.2E-64 T 14-10-2018 IPR009906 D-glutamate cyclase TMO_1271 1fcf6ac15c39405808277e563a379759 275 SUPERFAMILY SSF160920 16 267 1.57E-106 T 14-10-2018 IPR038021 Putative hydro-lyase TMO_1271 1fcf6ac15c39405808277e563a379759 275 Hamap MF_01830 Putative hydro-lyase . 19 274 51.616 T 14-10-2018 IPR016938 Uncharacterised protein family UPF0317 TMO_1271 1fcf6ac15c39405808277e563a379759 275 PIRSF PIRSF029755 11 275 2.6E-114 T 14-10-2018 IPR016938 Uncharacterised protein family UPF0317 TMO_1271 1fcf6ac15c39405808277e563a379759 275 Gene3D G3DSA:3.40.1640.10 28 262 1.1E-90 T 14-10-2018 TMO_3209 e6dcd7906dfba3b6b3622ffaba0ebd44 326 Pfam PF00005 ABC transporter 32 174 1.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3209 e6dcd7906dfba3b6b3622ffaba0ebd44 326 Gene3D G3DSA:3.40.50.300 6 249 1.7E-70 T 14-10-2018 TMO_3209 e6dcd7906dfba3b6b3622ffaba0ebd44 326 SMART SM00382 41 230 5.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3209 e6dcd7906dfba3b6b3622ffaba0ebd44 326 SUPERFAMILY SSF52540 10 237 3.38E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3209 e6dcd7906dfba3b6b3622ffaba0ebd44 326 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0433 61cbb09966a7711c1a26ed25d297a460 375 SUPERFAMILY SSF52540 11 249 2.89E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0433 61cbb09966a7711c1a26ed25d297a460 375 Pfam PF00005 ABC transporter 28 169 5.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0433 61cbb09966a7711c1a26ed25d297a460 375 Gene3D G3DSA:2.40.50.940 231 291 7.2E-8 T 14-10-2018 TMO_0433 61cbb09966a7711c1a26ed25d297a460 375 Gene3D G3DSA:3.40.50.300 10 230 2.3E-64 T 14-10-2018 TMO_0433 61cbb09966a7711c1a26ed25d297a460 375 SMART SM00382 36 219 2.2E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0433 61cbb09966a7711c1a26ed25d297a460 375 Pfam PF08402 TOBE domain 285 372 1.4E-10 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_0433 61cbb09966a7711c1a26ed25d297a460 375 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0433 61cbb09966a7711c1a26ed25d297a460 375 SUPERFAMILY SSF50331 245 373 9.07E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 Gene3D G3DSA:3.40.50.720 1 253 4.4E-79 T 14-10-2018 TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 SUPERFAMILY SSF51735 9 252 1.62E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 4.0E-52 T 14-10-2018 TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.7E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.7E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.7E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.7E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.7E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0465 d3b3aa205fddd3dcf4f4bf0a7a741119 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.7E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0474 d83a5e7d4c45c7eb115a75695cf93401 429 SUPERFAMILY SSF103473 21 387 8.63E-20 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0474 d83a5e7d4c45c7eb115a75695cf93401 429 Gene3D G3DSA:1.20.1250.20 20 387 1.6E-12 T 14-10-2018 TMO_3212 885ab8e100515d0e730fbf7894913d5a 330 Gene3D G3DSA:1.10.340.30 131 252 9.4E-26 T 14-10-2018 TMO_3212 885ab8e100515d0e730fbf7894913d5a 330 SUPERFAMILY SSF48150 128 289 3.49E-30 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TMO_3212 885ab8e100515d0e730fbf7894913d5a 330 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 140 288 4.8E-9 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TMO_3212 885ab8e100515d0e730fbf7894913d5a 330 SMART SM00478 137 308 1.7E-5 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TMO_3212 885ab8e100515d0e730fbf7894913d5a 330 Gene3D G3DSA:1.10.1670.10 253 303 1.6E-5 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TMO_a0560 d41b49056f4552f40b576f2a0ad211ff 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_a0560 d41b49056f4552f40b576f2a0ad211ff 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 483 2.3E-214 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 TMO_a0560 d41b49056f4552f40b576f2a0ad211ff 499 SUPERFAMILY SSF53720 2 483 2.09E-152 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_a0560 d41b49056f4552f40b576f2a0ad211ff 499 Pfam PF00171 Aldehyde dehydrogenase family 19 479 2.9E-147 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_a0560 d41b49056f4552f40b576f2a0ad211ff 499 Gene3D G3DSA:3.40.605.10 25 460 4.3E-158 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_a0560 d41b49056f4552f40b576f2a0ad211ff 499 Gene3D G3DSA:3.40.309.10 250 452 4.3E-158 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_2525 69923115520385997ec216ae0e4e9482 248 Pfam PF01614 Bacterial transcriptional regulator 127 241 2.1E-4 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_2525 69923115520385997ec216ae0e4e9482 248 Gene3D G3DSA:1.10.10.10 4 79 8.0E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2525 69923115520385997ec216ae0e4e9482 248 SUPERFAMILY SSF46785 6 77 2.68E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2525 69923115520385997ec216ae0e4e9482 248 SUPERFAMILY SSF55781 87 242 3.2E-25 T 14-10-2018 TMO_2525 69923115520385997ec216ae0e4e9482 248 Pfam PF09339 IclR helix-turn-helix domain 9 58 1.3E-10 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_2525 69923115520385997ec216ae0e4e9482 248 Gene3D G3DSA:3.30.450.40 80 246 1.2E-59 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_c0068 edd29542ed6041ae8db8edbf65979f5e 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 1.4E-61 T 14-10-2018 IPR026325 Protein of unknown function DUF932 TMO_0357 ac3561aa1bbcedec354f560b3fa38c0b 303 SUPERFAMILY SSF53335 33 215 7.71E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0357 ac3561aa1bbcedec354f560b3fa38c0b 303 Pfam PF08241 Methyltransferase domain 54 140 1.8E-11 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TMO_0357 ac3561aa1bbcedec354f560b3fa38c0b 303 Gene3D G3DSA:3.40.50.150 8 251 1.6E-16 T 14-10-2018 TMO_1581 94496f9b98798259c688e75931ae54e1 379 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 262 357 4.4E-12 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 TMO_1581 94496f9b98798259c688e75931ae54e1 379 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 169 182 1.2E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_1581 94496f9b98798259c688e75931ae54e1 379 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 67 79 1.2E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_1581 94496f9b98798259c688e75931ae54e1 379 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 252 271 1.2E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_1581 94496f9b98798259c688e75931ae54e1 379 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 47 65 1.2E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_1581 94496f9b98798259c688e75931ae54e1 379 Gene3D G3DSA:3.20.20.10 26 264 2.6E-95 T 14-10-2018 IPR029066 PLP-binding barrel TMO_1581 94496f9b98798259c688e75931ae54e1 379 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 47 65 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site TMO_1581 94496f9b98798259c688e75931ae54e1 379 SUPERFAMILY SSF50621 228 378 1.32E-31 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TMO_1581 94496f9b98798259c688e75931ae54e1 379 PRINTS PR01182 Ornithine decarboxylase signature 119 141 1.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TMO_1581 94496f9b98798259c688e75931ae54e1 379 PRINTS PR01182 Ornithine decarboxylase signature 19 43 1.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TMO_1581 94496f9b98798259c688e75931ae54e1 379 PRINTS PR01182 Ornithine decarboxylase signature 321 331 1.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TMO_1581 94496f9b98798259c688e75931ae54e1 379 PRINTS PR01182 Ornithine decarboxylase signature 45 72 1.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TMO_1581 94496f9b98798259c688e75931ae54e1 379 PRINTS PR01182 Ornithine decarboxylase signature 89 113 1.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TMO_1581 94496f9b98798259c688e75931ae54e1 379 Gene3D G3DSA:2.40.37.10 19 372 2.6E-95 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TMO_1581 94496f9b98798259c688e75931ae54e1 379 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 27 261 9.2E-58 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 TMO_1581 94496f9b98798259c688e75931ae54e1 379 SUPERFAMILY SSF51419 25 264 1.41E-65 T 14-10-2018 IPR029066 PLP-binding barrel TMO_1680 3cca787f48090c779993d92271c1b4b2 268 Gene3D G3DSA:3.20.20.140 1 260 2.2E-87 T 14-10-2018 TMO_1680 3cca787f48090c779993d92271c1b4b2 268 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TMO_1680 3cca787f48090c779993d92271c1b4b2 268 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TMO_1680 3cca787f48090c779993d92271c1b4b2 268 PIRSF PIRSF005902 1 258 5.8E-74 T 14-10-2018 IPR001130 TatD family GO:0016788 TMO_1680 3cca787f48090c779993d92271c1b4b2 268 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TMO_1680 3cca787f48090c779993d92271c1b4b2 268 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 7.4E-83 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 TMO_1680 3cca787f48090c779993d92271c1b4b2 268 SUPERFAMILY SSF51556 2 255 5.38E-84 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_1680 3cca787f48090c779993d92271c1b4b2 268 Pfam PF01026 TatD related DNase 3 255 2.5E-77 T 14-10-2018 IPR001130 TatD family GO:0016788 TMO_2943 a5214f3f402605fe5478aa1bb80a81a8 442 Gene3D G3DSA:3.40.50.80 319 442 8.8E-21 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_2943 a5214f3f402605fe5478aa1bb80a81a8 442 Pfam PF08022 FAD-binding domain 251 313 2.7E-6 T 14-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 TMO_2943 a5214f3f402605fe5478aa1bb80a81a8 442 SUPERFAMILY SSF63380 234 315 3.97E-17 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TMO_2943 a5214f3f402605fe5478aa1bb80a81a8 442 PRINTS PR00409 Phthalate dioxygenase reductase family signature 325 344 5.7E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_2943 a5214f3f402605fe5478aa1bb80a81a8 442 PRINTS PR00409 Phthalate dioxygenase reductase family signature 407 415 5.7E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_2943 a5214f3f402605fe5478aa1bb80a81a8 442 PRINTS PR00409 Phthalate dioxygenase reductase family signature 303 317 5.7E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_2943 a5214f3f402605fe5478aa1bb80a81a8 442 Pfam PF01794 Ferric reductase like transmembrane component 43 177 5.4E-16 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain TMO_2943 a5214f3f402605fe5478aa1bb80a81a8 442 Gene3D G3DSA:2.40.30.10 218 313 6.7E-15 T 14-10-2018 TMO_2943 a5214f3f402605fe5478aa1bb80a81a8 442 SUPERFAMILY SSF52343 320 439 2.49E-21 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_2275 3fa067d89250a541f8f7a5759d0b3160 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 447 2.6E-127 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane TMO_c0641 eda61db92a24db8dce39a4ae49b3fb47 264 Gene3D G3DSA:1.10.12.10 207 264 1.9E-15 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_c0641 eda61db92a24db8dce39a4ae49b3fb47 264 SUPERFAMILY SSF52096 9 263 2.57E-60 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_c0641 eda61db92a24db8dce39a4ae49b3fb47 264 Gene3D G3DSA:3.90.226.10 3 206 8.4E-60 T 14-10-2018 TMO_c0641 eda61db92a24db8dce39a4ae49b3fb47 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 234 1.1E-33 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_1132 eb419bb269f7d83d4a3c04b42aa96cd7 1663 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 777 814 2.6E-7 T 14-10-2018 IPR006530 YD repeat TMO_1132 eb419bb269f7d83d4a3c04b42aa96cd7 1663 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 577 601 2.2E-4 T 14-10-2018 IPR006530 YD repeat TMO_1132 eb419bb269f7d83d4a3c04b42aa96cd7 1663 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 955 989 5.5E-6 T 14-10-2018 IPR006530 YD repeat TMO_1132 eb419bb269f7d83d4a3c04b42aa96cd7 1663 Gene3D G3DSA:2.180.10.10 888 1342 2.5E-15 T 14-10-2018 TMO_1132 eb419bb269f7d83d4a3c04b42aa96cd7 1663 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1266 1343 2.2E-19 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 TMO_1132 eb419bb269f7d83d4a3c04b42aa96cd7 1663 Pfam PF05593 RHS Repeat 777 814 1.1E-8 T 14-10-2018 IPR031325 RHS repeat TMO_1132 eb419bb269f7d83d4a3c04b42aa96cd7 1663 SUPERFAMILY SSF56399 1305 1336 4.03E-5 T 14-10-2018 TMO_2440 b3040818732d6654a8b075f2c5bf114a 387 Gene3D G3DSA:3.40.50.1820 174 364 6.3E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2440 b3040818732d6654a8b075f2c5bf114a 387 SUPERFAMILY SSF53474 221 310 2.81E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3451 c6c6e1a8c6aa02fcc99f106eb84a3334 454 SUPERFAMILY SSF103473 31 452 1.44E-36 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_3451 c6c6e1a8c6aa02fcc99f106eb84a3334 454 Gene3D G3DSA:1.20.1250.20 22 446 5.3E-24 T 14-10-2018 TMO_3451 c6c6e1a8c6aa02fcc99f106eb84a3334 454 Pfam PF07690 Major Facilitator Superfamily 35 303 1.9E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0425 2bc9740fb55f0a7679874da6afc28d30 570 SUPERFAMILY SSF109755 322 530 3.56E-18 T 14-10-2018 TMO_c0425 2bc9740fb55f0a7679874da6afc28d30 570 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 3 308 6.0E-69 T 14-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 TMO_c0425 2bc9740fb55f0a7679874da6afc28d30 570 Pfam PF02690 Na+/Pi-cotransporter 14 149 6.1E-37 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TMO_c0425 2bc9740fb55f0a7679874da6afc28d30 570 Pfam PF02690 Na+/Pi-cotransporter 142 256 1.4E-10 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 Pfam PF00158 Sigma-54 interaction domain 320 487 2.2E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 SUPERFAMILY SSF52540 319 557 2.56E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 SUPERFAMILY SSF55785 145 277 6.98E-25 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 Pfam PF13188 PAS domain 18 57 7.9E-4 T 14-10-2018 IPR000014 PAS domain TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 286 3.0E-19 T 14-10-2018 IPR000014 PAS domain TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 Gene3D G3DSA:3.40.50.300 308 491 6.6E-66 T 14-10-2018 TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 406 421 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 Gene3D G3DSA:3.30.450.20 152 277 1.1E-27 T 14-10-2018 TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 SMART SM00091 160 227 4.1E-7 T 14-10-2018 IPR000014 PAS domain TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 SMART SM00091 16 82 0.033 T 14-10-2018 IPR000014 PAS domain TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 Pfam PF00989 PAS fold 163 276 1.8E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 Gene3D G3DSA:3.30.450.20 15 139 1.8E-8 T 14-10-2018 TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 SUPERFAMILY SSF55785 12 124 2.09E-7 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 SMART SM00382 340 484 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 Gene3D G3DSA:1.10.8.60 492 564 4.3E-22 T 14-10-2018 TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 344 357 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 Gene3D G3DSA:1.10.10.60 582 642 3.0E-5 T 14-10-2018 TMO_0320 a1825d6fd0393382cd2a83a81fae8d3f 647 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 533 542 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_c0158 12a4254f8b7d41448e30daeafbffd07a 314 Pfam PF07690 Major Facilitator Superfamily 35 255 5.0E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0158 12a4254f8b7d41448e30daeafbffd07a 314 SUPERFAMILY SSF103473 11 258 7.59E-18 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0158 12a4254f8b7d41448e30daeafbffd07a 314 Gene3D G3DSA:1.20.1250.20 20 279 3.4E-12 T 14-10-2018 TMO_0791 2c815ce78231d85dda6904591e2fbfad 312 SUPERFAMILY SSF46689 207 254 4.93E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0791 2c815ce78231d85dda6904591e2fbfad 312 Pfam PF01965 DJ-1/PfpI family 4 168 5.4E-22 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_0791 2c815ce78231d85dda6904591e2fbfad 312 SUPERFAMILY SSF52317 2 189 1.57E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_0791 2c815ce78231d85dda6904591e2fbfad 312 Pfam PF12833 Helix-turn-helix domain 229 307 9.1E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0791 2c815ce78231d85dda6904591e2fbfad 312 Gene3D G3DSA:3.40.50.880 1 197 1.1E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_0791 2c815ce78231d85dda6904591e2fbfad 312 SMART SM00342 223 306 6.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0791 2c815ce78231d85dda6904591e2fbfad 312 Gene3D G3DSA:1.10.10.60 209 311 7.2E-26 T 14-10-2018 TMO_0791 2c815ce78231d85dda6904591e2fbfad 312 SUPERFAMILY SSF46689 259 309 4.08E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0564 8cf56ad324c4a6b894d368d96b34bfbb 101 Pfam PF10387 Protein of unknown function (DUF2442) 29 97 2.0E-14 T 14-10-2018 IPR018841 Protein of unknown function DUF2442 TMO_0564 8cf56ad324c4a6b894d368d96b34bfbb 101 Gene3D G3DSA:3.30.2020.20 25 92 6.0E-29 T 14-10-2018 TMO_0680 33b751bddd93ee90331c04d24c1dcd3c 504 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 275 288 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_0680 33b751bddd93ee90331c04d24c1dcd3c 504 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 360 500 3.9E-55 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 TMO_0680 33b751bddd93ee90331c04d24c1dcd3c 504 SUPERFAMILY SSF52374 369 497 6.7E-22 T 14-10-2018 TMO_0680 33b751bddd93ee90331c04d24c1dcd3c 504 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 370 435 1.8E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_0680 33b751bddd93ee90331c04d24c1dcd3c 504 Gene3D G3DSA:3.40.1190.20 13 326 1.0E-98 T 14-10-2018 IPR029056 Ribokinase-like TMO_0680 33b751bddd93ee90331c04d24c1dcd3c 504 SUPERFAMILY SSF53613 21 327 1.71E-50 T 14-10-2018 IPR029056 Ribokinase-like TMO_0680 33b751bddd93ee90331c04d24c1dcd3c 504 Pfam PF00294 pfkB family carbohydrate kinase 21 323 1.6E-37 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB TMO_0680 33b751bddd93ee90331c04d24c1dcd3c 504 Hamap MF_01603 Bifunctional protein HldE [hldE]. 13 502 38.993 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 TMO_0680 33b751bddd93ee90331c04d24c1dcd3c 504 Gene3D G3DSA:3.40.50.620 350 502 3.8E-32 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_0680 33b751bddd93ee90331c04d24c1dcd3c 504 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 17 329 4.0E-104 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 TMO_0680 33b751bddd93ee90331c04d24c1dcd3c 504 Pfam PF01467 Cytidylyltransferase-like 373 464 1.3E-13 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_c0093 23442e0ed0e94e146631fb222ecf4bf2 559 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 28 290 1.7E-119 T 14-10-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB TMO_c0093 23442e0ed0e94e146631fb222ecf4bf2 559 SUPERFAMILY SSF110849 37 140 8.89E-10 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TMO_c0060 f42af8854ff696987f647c6aad7d1623 759 Gene3D G3DSA:3.40.50.300 495 749 3.5E-25 T 14-10-2018 TMO_c0060 f42af8854ff696987f647c6aad7d1623 759 SMART SM00487 69 413 3.9E-11 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_c0060 f42af8854ff696987f647c6aad7d1623 759 Gene3D G3DSA:3.40.50.300 63 180 4.6E-9 T 14-10-2018 TMO_c0060 f42af8854ff696987f647c6aad7d1623 759 Gene3D G3DSA:3.40.50.10810 312 454 6.6E-7 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily TMO_c0060 f42af8854ff696987f647c6aad7d1623 759 Pfam PF00271 Helicase conserved C-terminal domain 585 695 2.5E-6 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_c0060 f42af8854ff696987f647c6aad7d1623 759 SUPERFAMILY SSF52540 351 736 1.48E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0060 f42af8854ff696987f647c6aad7d1623 759 SUPERFAMILY SSF52540 68 412 2.16E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2822 77dc7d259450d42f6e8b7ac323ff06bc 257 Gene3D G3DSA:3.40.1280.10 82 245 1.3E-42 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_2822 77dc7d259450d42f6e8b7ac323ff06bc 257 SUPERFAMILY SSF75217 84 245 1.15E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases TMO_2822 77dc7d259450d42f6e8b7ac323ff06bc 257 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 25 242 7.9E-31 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TMO_2822 77dc7d259450d42f6e8b7ac323ff06bc 257 Pfam PF04452 RNA methyltransferase 27 241 4.1E-49 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TMO_2822 77dc7d259450d42f6e8b7ac323ff06bc 257 PIRSF PIRSF015601 16 245 2.2E-49 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TMO_2822 77dc7d259450d42f6e8b7ac323ff06bc 257 SUPERFAMILY SSF88697 17 77 1.02E-12 T 14-10-2018 IPR015947 PUA-like superfamily TMO_2822 77dc7d259450d42f6e8b7ac323ff06bc 257 Gene3D G3DSA:2.40.240.20 7 79 2.8E-19 T 14-10-2018 TMO_3370 ad977a4c69b7fce9915302caefba339f 294 SUPERFAMILY SSF51658 130 253 1.85E-6 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily TMO_3370 ad977a4c69b7fce9915302caefba339f 294 Gene3D G3DSA:3.20.20.150 31 289 2.7E-24 T 14-10-2018 TMO_3370 ad977a4c69b7fce9915302caefba339f 294 Pfam PF05114 Protein of unknown function (DUF692) 35 285 4.2E-27 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 TMO_3370 ad977a4c69b7fce9915302caefba339f 294 TIGRFAM TIGR04159 methbact_MbnB: methanobactin biosynthesis cassette protein MbnB 45 135 1.0E-40 T 14-10-2018 IPR026431 Methanobactin biosynthesis cassette protein MbnB TMO_a0462 3ed677e7f6ff77eed73f98c9abe576b8 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 253 2.5E-50 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_a0462 3ed677e7f6ff77eed73f98c9abe576b8 256 SUPERFAMILY SSF52096 3 254 9.32E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0462 3ed677e7f6ff77eed73f98c9abe576b8 256 Gene3D G3DSA:1.10.12.10 198 254 3.9E-12 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_a0462 3ed677e7f6ff77eed73f98c9abe576b8 256 Gene3D G3DSA:3.90.226.10 2 196 7.0E-60 T 14-10-2018 TMO_a0462 3ed677e7f6ff77eed73f98c9abe576b8 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_c0224 c1fa12b9c0d7fbb91c366f1c6f321baa 250 SUPERFAMILY SSF47240 29 247 1.87E-36 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_c0224 c1fa12b9c0d7fbb91c366f1c6f321baa 250 Gene3D G3DSA:1.20.1260.10 17 249 3.0E-57 T 14-10-2018 IPR012347 Ferritin-like TMO_c0224 c1fa12b9c0d7fbb91c366f1c6f321baa 250 Pfam PF05138 Phenylacetic acid catabolic protein 96 245 3.7E-17 T 14-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 TMO_a0285 5196825aa1502b16d65affa26f9df7e1 314 Gene3D G3DSA:3.20.20.70 1 297 2.6E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_a0285 5196825aa1502b16d65affa26f9df7e1 314 Pfam PF00682 HMGL-like 4 275 4.2E-43 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_a0285 5196825aa1502b16d65affa26f9df7e1 314 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_a0285 5196825aa1502b16d65affa26f9df7e1 314 SUPERFAMILY SSF51569 1 290 1.57E-66 T 14-10-2018 TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 Pfam PF00672 HAMP domain 198 247 1.9E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 SUPERFAMILY SSF47384 235 320 2.75E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 476 5.8E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 2.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 2.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 2.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 SMART SM00304 198 251 1.5E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 Gene3D G3DSA:3.30.565.10 325 480 1.7E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 Gene3D G3DSA:1.10.287.130 203 320 1.5E-16 T 14-10-2018 TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 SUPERFAMILY SSF55874 311 477 2.36E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 SUPERFAMILY SSF158472 202 249 5.23E-7 T 14-10-2018 TMO_2649 643ecc7113dcb253f3d8b18481c80d0f 498 SMART SM00387 365 479 8.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_3395 79f14802c90130918ffcea58821fc465 174 Pfam PF04186 FxsA cytoplasmic membrane protein 10 114 8.8E-33 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 TMO_3552 7dfebf7b4f7ebb56d60e6fc98988eaa1 241 Gene3D G3DSA:3.40.50.1010 134 217 1.3E-7 T 14-10-2018 TMO_3552 7dfebf7b4f7ebb56d60e6fc98988eaa1 241 Pfam PF01936 NYN domain 146 195 1.4E-9 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type TMO_1868 5ffea5f13e8cdaf7e6f5518ac4919962 150 TIGRFAM TIGR00166 S6: ribosomal protein bS6 4 94 9.9E-21 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1868 5ffea5f13e8cdaf7e6f5518ac4919962 150 SUPERFAMILY SSF54995 1 104 7.72E-32 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1868 5ffea5f13e8cdaf7e6f5518ac4919962 150 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 19.494 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_1868 5ffea5f13e8cdaf7e6f5518ac4919962 150 Pfam PF01250 Ribosomal protein S6 4 92 5.4E-24 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1868 5ffea5f13e8cdaf7e6f5518ac4919962 150 Gene3D G3DSA:3.30.70.60 1 101 5.2E-27 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 TMO_3112 26f0e102111d279b563bc4b9c1041a24 254 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 254 112.641 T 14-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 TMO_3112 26f0e102111d279b563bc4b9c1041a24 254 Gene3D G3DSA:1.20.910.10 7 240 1.6E-55 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_3112 26f0e102111d279b563bc4b9c1041a24 254 SUPERFAMILY SSF48613 10 249 4.45E-60 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_3112 26f0e102111d279b563bc4b9c1041a24 254 Pfam PF03070 TENA/THI-4/PQQC family 21 229 5.6E-51 T 14-10-2018 IPR004305 Thiaminase-2/PQQC TMO_3112 26f0e102111d279b563bc4b9c1041a24 254 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 13 248 1.8E-104 T 14-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Gene3D G3DSA:3.50.50.60 146 276 1.1E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Gene3D G3DSA:3.50.50.60 286 480 7.5E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 456 8.2E-30 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 134 1.5E-36 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 SUPERFAMILY SSF46548 4 157 2.51E-34 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Gene3D G3DSA:1.10.1060.10 2 145 1.3E-31 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 SUPERFAMILY SSF51971 146 400 2.71E-67 T 14-10-2018 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.4E-33 T 14-10-2018 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PRINTS PR00419 Adrenodoxin reductase family signature 291 305 3.4E-33 T 14-10-2018 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.4E-33 T 14-10-2018 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.4E-33 T 14-10-2018 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PRINTS PR00419 Adrenodoxin reductase family signature 325 338 3.4E-33 T 14-10-2018 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 467 1.8E-159 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 TMO_0184 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 SUPERFAMILY SSF51971 374 468 6.36E-12 T 14-10-2018 TMO_0281 87ce51a5641c1e14b971a0b8222a1725 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.2E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0281 87ce51a5641c1e14b971a0b8222a1725 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.2E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0281 87ce51a5641c1e14b971a0b8222a1725 242 SUPERFAMILY SSF48008 99 226 9.42E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0281 87ce51a5641c1e14b971a0b8222a1725 242 SUPERFAMILY SSF46785 11 79 9.11E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0281 87ce51a5641c1e14b971a0b8222a1725 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 2.6E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0281 87ce51a5641c1e14b971a0b8222a1725 242 SMART SM00345 16 75 8.5E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0281 87ce51a5641c1e14b971a0b8222a1725 242 Gene3D G3DSA:1.10.10.10 3 76 3.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0281 87ce51a5641c1e14b971a0b8222a1725 242 Gene3D G3DSA:1.20.120.530 98 227 2.3E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0281 87ce51a5641c1e14b971a0b8222a1725 242 SMART SM00895 100 223 4.7E-21 T 14-10-2018 IPR011711 GntR, C-terminal TMO_0281 87ce51a5641c1e14b971a0b8222a1725 242 Pfam PF07729 FCD domain 100 222 2.6E-22 T 14-10-2018 IPR011711 GntR, C-terminal TMO_3286 7bc94da481e23d634967883d79038259 322 Gene3D G3DSA:3.40.50.300 127 184 2.3E-8 T 14-10-2018 TMO_3286 7bc94da481e23d634967883d79038259 322 SUPERFAMILY SSF53795 119 177 4.88E-11 T 14-10-2018 TMO_3551 7918fe9216b9d1b81ebc66afa9979cc4 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 232 248 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_3551 7918fe9216b9d1b81ebc66afa9979cc4 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 292 5.4E-59 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_3551 7918fe9216b9d1b81ebc66afa9979cc4 326 SUPERFAMILY SSF51735 105 293 2.32E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3551 7918fe9216b9d1b81ebc66afa9979cc4 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 180 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TMO_3551 7918fe9216b9d1b81ebc66afa9979cc4 326 Gene3D G3DSA:3.40.50.720 8 319 3.0E-110 T 14-10-2018 TMO_3551 7918fe9216b9d1b81ebc66afa9979cc4 326 SUPERFAMILY SSF52283 5 139 3.4E-39 T 14-10-2018 TMO_3551 7918fe9216b9d1b81ebc66afa9979cc4 326 Gene3D G3DSA:3.40.50.720 102 292 3.0E-110 T 14-10-2018 TMO_3551 7918fe9216b9d1b81ebc66afa9979cc4 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 323 4.6E-32 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TMO_1016 19f32d206f9344caf4ba0eed6cede957 432 Gene3D G3DSA:3.90.1150.10 295 432 1.5E-48 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_1016 19f32d206f9344caf4ba0eed6cede957 432 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 426 3.9E-128 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_1016 19f32d206f9344caf4ba0eed6cede957 432 SUPERFAMILY SSF53383 6 427 1.14E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_1016 19f32d206f9344caf4ba0eed6cede957 432 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 7 427 8.8E-185 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 TMO_1016 19f32d206f9344caf4ba0eed6cede957 432 PIRSF PIRSF001434 1 430 5.9E-122 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_1016 19f32d206f9344caf4ba0eed6cede957 432 Gene3D G3DSA:3.40.640.10 6 291 3.2E-92 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0571 60d07b9d6b82591a0314a58c1a65afd6 408 SUPERFAMILY SSF102114 41 256 4.58E-12 T 14-10-2018 TMO_0571 60d07b9d6b82591a0314a58c1a65afd6 408 Gene3D G3DSA:3.20.20.70 36 252 4.3E-11 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_0927 7e2a956cb9d433fedf21ee681bf1425a 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 323 3.9E-32 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 SUPERFAMILY SSF51735 433 679 4.42E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 SUPERFAMILY SSF53639 24 225 6.87E-32 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 SMART SM01007 28 227 4.2E-31 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 444 676 5.2E-41 T 14-10-2018 TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 Gene3D G3DSA:3.40.225.10 24 231 1.8E-52 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 Gene3D G3DSA:3.40.50.720 427 682 4.8E-54 T 14-10-2018 TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 643 663 6.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 581 600 6.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 438 455 6.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 507 518 6.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 602 619 6.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0149 eb72c3abb98d6c2f6e967e67a941c6b9 683 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 30 225 2.6E-23 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_3356 9706effd71ff4f0f03043ff057adb64c 467 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 4.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3356 9706effd71ff4f0f03043ff057adb64c 467 SUPERFAMILY SSF46785 17 83 1.53E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3356 9706effd71ff4f0f03043ff057adb64c 467 Pfam PF00155 Aminotransferase class I and II 138 456 2.9E-25 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_3356 9706effd71ff4f0f03043ff057adb64c 467 SMART SM00345 21 80 1.1E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3356 9706effd71ff4f0f03043ff057adb64c 467 Gene3D G3DSA:1.10.10.10 14 84 8.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3356 9706effd71ff4f0f03043ff057adb64c 467 Gene3D G3DSA:3.40.640.10 104 459 2.0E-108 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_3356 9706effd71ff4f0f03043ff057adb64c 467 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 9.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3356 9706effd71ff4f0f03043ff057adb64c 467 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 9.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3356 9706effd71ff4f0f03043ff057adb64c 467 SUPERFAMILY SSF53383 98 465 3.84E-83 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 SUPERFAMILY SSF54211 232 483 7.59E-85 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 Hamap MF_00505 Chaperone protein HtpG [htpG]. 6 643 29.263 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 184 1.2E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 SUPERFAMILY SSF110942 522 643 4.84E-25 T 14-10-2018 IPR037196 HSP90, C-terminal domain TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 PIRSF PIRSF002583 2 648 8.5E-189 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 Gene3D G3DSA:1.20.120.790 515 643 9.0E-31 T 14-10-2018 IPR037196 HSP90, C-terminal domain TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 SMART SM00387 31 186 2.5E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 Gene3D G3DSA:3.40.50.11260 399 484 5.0E-25 T 14-10-2018 TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 Gene3D G3DSA:3.30.565.10 2 230 1.1E-71 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 97 114 4.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 124 146 4.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 192 210 4.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 30 52 4.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 9 29 4.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 79 96 4.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 174 191 4.3E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 Gene3D G3DSA:3.30.230.80 231 398 5.9E-59 T 14-10-2018 TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 SUPERFAMILY SSF55874 9 215 1.02E-59 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_3058 27dfebb65d707d9af31ec5cb726768f1 648 Pfam PF00183 Hsp90 protein 224 644 1.3E-96 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TMO_0411 d6292db17ab7ce519461d3697e9c534e 204 Pfam PF07885 Ion channel 76 146 5.8E-13 T 14-10-2018 IPR013099 Potassium channel domain TMO_0411 d6292db17ab7ce519461d3697e9c534e 204 Gene3D G3DSA:1.10.287.70 10 160 5.2E-12 T 14-10-2018 TMO_0411 d6292db17ab7ce519461d3697e9c534e 204 SUPERFAMILY SSF81324 54 175 1.01E-17 T 14-10-2018 TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 244.882 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 Pfam PF07497 Rho termination factor, RNA-binding domain 53 125 6.2E-31 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 SMART SM00959 5 47 4.3E-18 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 418 1.1E-214 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 Gene3D G3DSA:3.40.50.300 130 418 2.6E-127 T 14-10-2018 TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 161 364 2.0E-24 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 SUPERFAMILY SSF52540 91 372 7.19E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 8.4E-17 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 SMART SM00357 52 118 2.9E-14 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 SUPERFAMILY SSF50249 49 125 1.66E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 Gene3D G3DSA:1.10.720.10 1 45 9.9E-17 T 14-10-2018 TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 Gene3D G3DSA:2.40.50.140 47 123 2.6E-33 T 14-10-2018 TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 SUPERFAMILY SSF68912 1 46 5.49E-12 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily TMO_3408 b7b1a036af1d19b5e6694b01d5154af5 419 SMART SM00382 171 356 3.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2347 2a31a77abe05dd4ddfa03c18f40c5628 455 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 454 1.5E-185 T 14-10-2018 IPR010252 Formiminoglutamate deiminase TMO_2347 2a31a77abe05dd4ddfa03c18f40c5628 455 SUPERFAMILY SSF51556 51 377 2.08E-70 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_2347 2a31a77abe05dd4ddfa03c18f40c5628 455 Gene3D G3DSA:3.20.20.140 53 446 2.3E-177 T 14-10-2018 TMO_2347 2a31a77abe05dd4ddfa03c18f40c5628 455 Pfam PF01979 Amidohydrolase family 50 428 3.5E-36 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_2347 2a31a77abe05dd4ddfa03c18f40c5628 455 SUPERFAMILY SSF51338 360 453 1.22E-10 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2347 2a31a77abe05dd4ddfa03c18f40c5628 455 Gene3D G3DSA:2.30.40.10 9 434 2.3E-177 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 343 586 5.1E-26 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 625 707 2.8E-11 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 51 94 1.8E-8 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 SUPERFAMILY SSF56003 19 273 6.28E-38 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 PIRSF PIRSF036389 1 759 3.8E-216 T 14-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 SUPERFAMILY SSF56003 345 752 8.37E-102 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 Gene3D G3DSA:3.90.1170.50 216 295 9.4E-6 T 14-10-2018 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 Gene3D G3DSA:3.30.365.10 615 758 4.5E-34 T 14-10-2018 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 Gene3D G3DSA:3.30.365.10 48 102 9.1E-12 T 14-10-2018 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 Gene3D G3DSA:3.30.365.10 137 209 2.6E-8 T 14-10-2018 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 Gene3D G3DSA:3.30.365.10 349 585 5.5E-46 T 14-10-2018 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 Gene3D G3DSA:3.30.365.10 374 470 5.5E-46 T 14-10-2018 TMO_c0436 5946c681ae5e0193a8f04a67e2a52f71 772 SMART SM01008 240 320 2.6E-9 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 415 1.1E-197 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 332 414 1.0E-29 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 Gene3D G3DSA:1.20.1440.230 328 426 5.5E-37 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 Pfam PF10531 SLBB domain 242 291 7.4E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 343 354 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 Gene3D G3DSA:3.10.20.600 231 327 9.6E-43 T 14-10-2018 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 SUPERFAMILY SSF140490 326 417 3.66E-36 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 216 3.2E-50 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 166 181 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 SMART SM00928 330 375 4.8E-26 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 SUPERFAMILY SSF142984 240 325 6.8E-25 T 14-10-2018 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 Gene3D G3DSA:3.40.50.11540 52 229 3.3E-83 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1973 27a799d188a29ba7a99bcbf7af5db84d 426 SUPERFAMILY SSF142019 3 239 6.15E-88 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 793 1131 1.7E-64 T 14-10-2018 IPR010080 Thioester reductase-like domain TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 Pfam PF13193 AMP-binding enzyme C-terminal domain 584 656 2.8E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 SUPERFAMILY SSF47336 682 751 1.7E-15 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 SMART SM00823 Phosphopantetheine attachment site 686 754 2.2E-10 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 Pfam PF07993 Male sterility protein 795 1017 9.4E-41 T 14-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 Gene3D G3DSA:1.10.1200.10 672 758 2.7E-19 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 Gene3D G3DSA:3.40.50.720 767 1141 2.1E-72 T 14-10-2018 TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 197 597 2.0E-101 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 SUPERFAMILY SSF51735 792 1045 7.58E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 Pfam PF00501 AMP-binding enzyme 179 575 5.9E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 Pfam PF00550 Phosphopantetheine attachment site 687 750 4.0E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 PIRSF PIRSF001617 604 1084 2.3E-55 T 14-10-2018 TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 PIRSF PIRSF001617 282 618 2.6E-23 T 14-10-2018 TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 PIRSF PIRSF001617 98 294 2.0E-4 T 14-10-2018 TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 SUPERFAMILY SSF56801 136 673 6.15E-134 T 14-10-2018 TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 Gene3D G3DSA:3.40.50.12780 166 568 1.1E-109 T 14-10-2018 TMO_c0727 6ce3333ac9c1c703db7f106744e34906 1160 Gene3D G3DSA:3.30.300.30 571 671 3.5E-27 T 14-10-2018 TMO_a0540 d2f4e4915ceef6637fe08719f022a01d 260 Gene3D G3DSA:1.10.12.10 204 260 2.0E-16 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_a0540 d2f4e4915ceef6637fe08719f022a01d 260 Gene3D G3DSA:3.90.226.10 1 203 1.9E-69 T 14-10-2018 TMO_a0540 d2f4e4915ceef6637fe08719f022a01d 260 SUPERFAMILY SSF52096 2 258 9.34E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0540 d2f4e4915ceef6637fe08719f022a01d 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 258 3.3E-50 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_a0540 d2f4e4915ceef6637fe08719f022a01d 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_0155 a80063b061248be137d1ad558d00f650 421 Gene3D G3DSA:3.40.50.1820 111 404 3.6E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0155 a80063b061248be137d1ad558d00f650 421 SUPERFAMILY SSF53474 116 403 4.18E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0397 1245fb39c14d417cc160088dcb56e212 325 SUPERFAMILY SSF51395 6 323 2.15E-105 T 14-10-2018 TMO_a0397 1245fb39c14d417cc160088dcb56e212 325 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 323 1.7E-70 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TMO_a0397 1245fb39c14d417cc160088dcb56e212 325 Gene3D G3DSA:3.20.20.70 6 325 8.6E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2921 5052fd7eacc7a3a98c76108cc8ecb5ea 349 Pfam PF01032 FecCD transport family 29 343 1.4E-84 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_2921 5052fd7eacc7a3a98c76108cc8ecb5ea 349 Gene3D G3DSA:1.10.3470.10 15 349 2.2E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_2921 5052fd7eacc7a3a98c76108cc8ecb5ea 349 SUPERFAMILY SSF81345 13 342 2.22E-77 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1754 cb307103c3d9ff2a422c0e4c495a2340 69 Gene3D G3DSA:3.30.70.100 4 63 1.5E-16 T 14-10-2018 TMO_1754 cb307103c3d9ff2a422c0e4c495a2340 69 Pfam PF00403 Heavy-metal-associated domain 5 63 5.3E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_1754 cb307103c3d9ff2a422c0e4c495a2340 69 SUPERFAMILY SSF55008 1 63 8.64E-14 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_b0455 130fd38a44b56dc80709db2c15b0e73c 296 Pfam PF00639 PPIC-type PPIASE domain 145 239 7.1E-23 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TMO_b0455 130fd38a44b56dc80709db2c15b0e73c 296 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 179 199 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 TMO_b0455 130fd38a44b56dc80709db2c15b0e73c 296 SUPERFAMILY SSF109998 32 160 1.29E-7 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily TMO_b0455 130fd38a44b56dc80709db2c15b0e73c 296 Gene3D G3DSA:3.10.50.40 139 240 1.9E-24 T 14-10-2018 TMO_b0455 130fd38a44b56dc80709db2c15b0e73c 296 Gene3D G3DSA:1.10.4030.30 97 138 1.9E-24 T 14-10-2018 TMO_b0455 130fd38a44b56dc80709db2c15b0e73c 296 SUPERFAMILY SSF54534 135 241 4.06E-24 T 14-10-2018 TMO_3050 a8e67f33bed0f09afc01d6e0e62de60d 482 Pfam PF01435 Peptidase family M48 62 246 4.1E-37 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_3050 a8e67f33bed0f09afc01d6e0e62de60d 482 Gene3D G3DSA:3.30.2010.10 56 142 1.9E-7 T 14-10-2018 TMO_2916 aaa298896c21df0d83cc0276a3c3a2ad 277 Gene3D G3DSA:1.10.30.40 15 67 8.8E-14 T 14-10-2018 TMO_2916 aaa298896c21df0d83cc0276a3c3a2ad 277 Gene3D G3DSA:3.40.50.11240 78 257 1.7E-57 T 14-10-2018 TMO_2916 aaa298896c21df0d83cc0276a3c3a2ad 277 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 22 258 2.4E-81 T 14-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 TMO_2916 aaa298896c21df0d83cc0276a3c3a2ad 277 PIRSF PIRSF018982 5 268 4.8E-84 T 14-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 TMO_2793 d3752711f17971057e27e0f28f79cb9a 326 Gene3D G3DSA:3.40.50.11270 28 112 4.2E-103 T 14-10-2018 TMO_2793 d3752711f17971057e27e0f28f79cb9a 326 Gene3D G3DSA:3.40.1010.20 22 296 4.2E-103 T 14-10-2018 TMO_2793 d3752711f17971057e27e0f28f79cb9a 326 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 17 302 35.612 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TMO_2793 d3752711f17971057e27e0f28f79cb9a 326 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 18 300 5.3E-95 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TMO_2793 d3752711f17971057e27e0f28f79cb9a 326 Gene3D G3DSA:3.40.1010.20 113 211 4.2E-103 T 14-10-2018 TMO_2793 d3752711f17971057e27e0f28f79cb9a 326 Pfam PF02401 LytB protein 19 297 4.0E-87 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TMO_2267 442e0fb45700ced97093ed879abf49d5 826 Pfam PF07715 TonB-dependent Receptor Plug Domain 173 282 3.4E-22 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_2267 442e0fb45700ced97093ed879abf49d5 826 Pfam PF00593 TonB dependent receptor 355 825 5.1E-64 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_2267 442e0fb45700ced97093ed879abf49d5 826 Gene3D G3DSA:2.170.130.10 149 291 3.8E-39 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_2267 442e0fb45700ced97093ed879abf49d5 826 SMART SM00965 77 128 3.5E-8 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_2267 442e0fb45700ced97093ed879abf49d5 826 SUPERFAMILY SSF56935 136 826 3.79E-142 T 14-10-2018 TMO_2267 442e0fb45700ced97093ed879abf49d5 826 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 174 825 1.8E-116 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_2267 442e0fb45700ced97093ed879abf49d5 826 Gene3D G3DSA:3.55.50.30 47 148 1.2E-26 T 14-10-2018 TMO_2267 442e0fb45700ced97093ed879abf49d5 826 Gene3D G3DSA:2.40.170.20 292 826 2.0E-138 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_3124 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 SUPERFAMILY SSF53223 780 968 2.88E-24 T 14-10-2018 TMO_3124 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 64 1608 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 TMO_3124 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 PIRSF PIRSF036761 5 1613 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 TMO_3124 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 SUPERFAMILY SSF51735 957 1296 1.61E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2274 d037533d2c31b397870dd21d1a8f7ea9 281 Gene3D G3DSA:1.10.10.10 1 86 2.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2274 d037533d2c31b397870dd21d1a8f7ea9 281 SUPERFAMILY SSF46785 4 112 8.18E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2274 d037533d2c31b397870dd21d1a8f7ea9 281 Gene3D G3DSA:3.40.190.10 162 255 8.0E-55 T 14-10-2018 TMO_2274 d037533d2c31b397870dd21d1a8f7ea9 281 Gene3D G3DSA:3.40.190.10 96 262 8.0E-55 T 14-10-2018 TMO_2274 d037533d2c31b397870dd21d1a8f7ea9 281 SUPERFAMILY SSF53850 92 279 1.06E-25 T 14-10-2018 TMO_2274 d037533d2c31b397870dd21d1a8f7ea9 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2274 d037533d2c31b397870dd21d1a8f7ea9 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2274 d037533d2c31b397870dd21d1a8f7ea9 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2274 d037533d2c31b397870dd21d1a8f7ea9 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2274 d037533d2c31b397870dd21d1a8f7ea9 281 Pfam PF03466 LysR substrate binding domain 91 279 9.4E-27 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_a0304 2864b5bc9206184311d238414defdad3 765 Gene3D G3DSA:3.30.365.10 362 753 2.3E-99 T 14-10-2018 TMO_a0304 2864b5bc9206184311d238414defdad3 765 Gene3D G3DSA:3.30.365.10 20 279 4.6E-70 T 14-10-2018 TMO_a0304 2864b5bc9206184311d238414defdad3 765 Gene3D G3DSA:3.30.365.10 132 350 4.6E-70 T 14-10-2018 TMO_a0304 2864b5bc9206184311d238414defdad3 765 Gene3D G3DSA:3.30.365.10 433 612 2.3E-99 T 14-10-2018 TMO_a0304 2864b5bc9206184311d238414defdad3 765 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 22 124 4.8E-18 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_a0304 2864b5bc9206184311d238414defdad3 765 SMART SM01008 22 131 3.3E-27 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_a0304 2864b5bc9206184311d238414defdad3 765 SUPERFAMILY SSF54665 10 132 2.22E-28 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily TMO_a0304 2864b5bc9206184311d238414defdad3 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 157 697 1.8E-111 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_a0304 2864b5bc9206184311d238414defdad3 765 Gene3D G3DSA:3.90.1170.50 37 131 4.6E-70 T 14-10-2018 TMO_a0304 2864b5bc9206184311d238414defdad3 765 SUPERFAMILY SSF56003 153 755 2.36E-144 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TMO_2186 6269da1ab5f1622c4b744b42702f686e 95 Pfam PF10038 Protein of unknown function (DUF2274) 1 69 1.6E-34 T 14-10-2018 IPR018733 Protein of unknown function DUF2274 TMO_b0391 80fd8a00cc6fcaa06399869263376871 464 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 296 443 6.1E-32 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_b0391 80fd8a00cc6fcaa06399869263376871 464 SUPERFAMILY SSF47203 292 446 9.02E-38 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_b0391 80fd8a00cc6fcaa06399869263376871 464 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 54 175 1.8E-11 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_b0391 80fd8a00cc6fcaa06399869263376871 464 SUPERFAMILY SSF56645 47 306 5.37E-56 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_b0391 80fd8a00cc6fcaa06399869263376871 464 Gene3D G3DSA:1.20.140.10 295 453 9.4E-35 T 14-10-2018 TMO_b0391 80fd8a00cc6fcaa06399869263376871 464 Gene3D G3DSA:1.10.540.10 43 177 3.1E-42 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_b0391 80fd8a00cc6fcaa06399869263376871 464 Gene3D G3DSA:2.40.110.10 178 293 7.1E-37 T 14-10-2018 TMO_b0391 80fd8a00cc6fcaa06399869263376871 464 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 180 281 2.4E-17 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 SMART SM00382 313 504 9.0E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 SMART SM00382 34 233 3.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 SUPERFAMILY SSF52540 5 254 1.63E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 SUPERFAMILY SSF52540 278 526 6.32E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 Pfam PF00005 ABC transporter 305 454 7.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 532 1.7E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 269 5.9E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 Gene3D G3DSA:3.40.50.300 3 274 2.5E-86 T 14-10-2018 TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 Gene3D G3DSA:3.40.50.300 275 545 1.1E-81 T 14-10-2018 TMO_2850 13382ee11a5c4404c8f9d7bf788ad765 555 Pfam PF00005 ABC transporter 26 183 2.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1939 c3cf5a25d0b9f3a1e0e7627cfa94c033 336 Gene3D G3DSA:1.10.3470.10 3 330 1.4E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1939 c3cf5a25d0b9f3a1e0e7627cfa94c033 336 SUPERFAMILY SSF81345 6 326 1.96E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1939 c3cf5a25d0b9f3a1e0e7627cfa94c033 336 Pfam PF01032 FecCD transport family 23 326 1.1E-71 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_2997 07976fdcc2fac21ee539522ef218af1f 243 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2997 07976fdcc2fac21ee539522ef218af1f 243 Gene3D G3DSA:3.40.50.300 3 241 2.4E-62 T 14-10-2018 TMO_2997 07976fdcc2fac21ee539522ef218af1f 243 Pfam PF00005 ABC transporter 25 178 3.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2997 07976fdcc2fac21ee539522ef218af1f 243 SUPERFAMILY SSF52540 5 235 2.1E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2997 07976fdcc2fac21ee539522ef218af1f 243 SMART SM00382 34 226 3.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3176 74bbd15e646242557ec106661c1e82ff 378 SUPERFAMILY SSF53383 8 372 8.81E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_3176 74bbd15e646242557ec106661c1e82ff 378 Pfam PF00155 Aminotransferase class I and II 26 368 1.4E-56 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_3176 74bbd15e646242557ec106661c1e82ff 378 Gene3D G3DSA:3.40.640.10 2 377 2.0E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 4.1E-98 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 4.1E-98 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 4.1E-98 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 4.1E-98 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 4.1E-98 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 4.1E-98 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 4.1E-98 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 4.1E-98 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 4.1E-98 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82693 137 332 2.35E-26 T 14-10-2018 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:1.20.1640.10 9 511 0.0 T 14-10-2018 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:3.30.70.1430 39 816 0.0 T 14-10-2018 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82866 298 500 4.58E-52 T 14-10-2018 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:3.30.70.1430 566 667 0.0 T 14-10-2018 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82866 805 1027 1.7E-48 T 14-10-2018 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82714 184 273 4.84E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 14-10-2018 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82693 564 670 6.02E-21 T 14-10-2018 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1041 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:3.30.2090.10 720 808 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82714 721 805 5.89E-20 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82693 39 133 1.7E-26 T 14-10-2018 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:1.20.1640.10 512 1022 0.0 T 14-10-2018 TMO_2666 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:3.30.70.1440 668 865 0.0 T 14-10-2018 TMO_3398 ca226652fd26a452daaf2b27c0cfbeb7 294 SUPERFAMILY SSF51735 2 253 6.12E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3398 ca226652fd26a452daaf2b27c0cfbeb7 294 Gene3D G3DSA:3.40.50.720 4 268 8.8E-60 T 14-10-2018 TMO_3398 ca226652fd26a452daaf2b27c0cfbeb7 294 Pfam PF05368 NmrA-like family 3 221 2.8E-28 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 TMO_3398 ca226652fd26a452daaf2b27c0cfbeb7 294 Gene3D G3DSA:3.90.25.10 134 259 8.8E-60 T 14-10-2018 TMO_2506 2281239c6d002a3407e88652a482bacd 284 Gene3D G3DSA:3.40.250.10 6 152 1.1E-49 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_2506 2281239c6d002a3407e88652a482bacd 284 Gene3D G3DSA:3.40.250.10 154 280 2.1E-40 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_2506 2281239c6d002a3407e88652a482bacd 284 SMART SM00450 158 280 4.3E-20 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_2506 2281239c6d002a3407e88652a482bacd 284 SMART SM00450 10 134 1.5E-23 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_2506 2281239c6d002a3407e88652a482bacd 284 SUPERFAMILY SSF52821 162 283 1.31E-35 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_2506 2281239c6d002a3407e88652a482bacd 284 SUPERFAMILY SSF52821 2 151 4.32E-43 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_2506 2281239c6d002a3407e88652a482bacd 284 Pfam PF00581 Rhodanese-like domain 12 130 4.6E-16 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_2506 2281239c6d002a3407e88652a482bacd 284 Pfam PF00581 Rhodanese-like domain 162 276 6.5E-12 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_2925 862dfe8313ebd18315cc6d1cac2772e4 326 Gene3D G3DSA:3.40.190.10 185 291 2.5E-55 T 14-10-2018 TMO_2925 862dfe8313ebd18315cc6d1cac2772e4 326 Pfam PF03466 LysR substrate binding domain 110 319 1.3E-24 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2925 862dfe8313ebd18315cc6d1cac2772e4 326 SUPERFAMILY SSF46785 21 101 1.2E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2925 862dfe8313ebd18315cc6d1cac2772e4 326 Gene3D G3DSA:1.10.10.10 16 103 1.3E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2925 862dfe8313ebd18315cc6d1cac2772e4 326 SUPERFAMILY SSF53850 106 317 9.23E-35 T 14-10-2018 TMO_2925 862dfe8313ebd18315cc6d1cac2772e4 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2925 862dfe8313ebd18315cc6d1cac2772e4 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2925 862dfe8313ebd18315cc6d1cac2772e4 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2925 862dfe8313ebd18315cc6d1cac2772e4 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 83 8.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2925 862dfe8313ebd18315cc6d1cac2772e4 326 Gene3D G3DSA:3.40.190.10 106 315 2.5E-55 T 14-10-2018 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:2.40.50.140 144 206 6.7E-24 T 14-10-2018 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:1.10.150.20 440 500 1.2E-12 T 14-10-2018 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:3.30.300.20 207 285 1.6E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_3540 1c7ef32102bea82b6714044e7636407b 519 Pfam PF14520 Helix-hairpin-helix domain 442 497 1.1E-4 T 14-10-2018 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 13 350 1.7E-137 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF47794 357 419 1.27E-13 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF54814 287 350 2.09E-17 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 11 418 31.376 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF54814 208 285 2.03E-31 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF47794 438 502 2.35E-9 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF50249 140 207 2.94E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_3540 1c7ef32102bea82b6714044e7636407b 519 Pfam PF08529 NusA N-terminal domain 13 133 5.6E-39 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 SMART SM00316 142 208 7.9E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:1.10.150.20 363 426 5.6E-18 T 14-10-2018 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:3.30.1480.10 10 136 4.1E-45 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF69705 12 134 2.88E-42 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 373 419 1.4E-15 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication TMO_3540 1c7ef32102bea82b6714044e7636407b 519 Pfam PF13184 NusA-like KH domain 238 304 3.9E-29 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 SMART SM00322 238 301 12.0 T 14-10-2018 IPR004087 K Homology domain GO:0003676 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 SMART SM00322 309 378 3.2E-5 T 14-10-2018 IPR004087 K Homology domain GO:0003676 TMO_3540 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:3.30.300.20 286 354 8.1E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 57 254 1.9E-86 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 183 198 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 231 243 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 Pfam PF00813 FliP family 57 250 2.4E-79 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 183 203 3.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 253 3.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 74 94 3.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 204 225 3.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 94 113 3.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 55 74 3.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 125 139 5.3E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 176 188 5.3E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 53 62 5.3E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 153 165 5.3E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 113 125 5.3E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_1116 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 244 254 5.3E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_1083 321bfb21c4b084f439174e86df72c79e 929 Gene3D G3DSA:2.60.120.260 445 597 9.7E-22 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily TMO_1083 321bfb21c4b084f439174e86df72c79e 929 Gene3D G3DSA:2.60.120.260 147 276 2.0E-26 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily TMO_1083 321bfb21c4b084f439174e86df72c79e 929 Pfam PF03170 Bacterial cellulose synthase subunit 159 681 3.2E-62 T 14-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 TMO_c0579 dca28e11ac846d74dc6be95984804c65 115 Gene3D G3DSA:1.10.260.40 55 115 2.7E-20 T 14-10-2018 TMO_c0579 dca28e11ac846d74dc6be95984804c65 115 SUPERFAMILY SSF47413 56 97 2.03E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_c0579 dca28e11ac846d74dc6be95984804c65 115 Pfam PF01381 Helix-turn-helix 55 91 5.4E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_3491 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 261 287 9.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_3491 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 411 428 9.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_3491 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 33 52 9.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_3491 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 157 178 9.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_3491 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 52 68 9.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_3491 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 359 378 9.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_3491 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 133 157 9.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_3491 a7119e10501300880c40a9a836af2647 518 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 505 3.8E-129 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_3491 a7119e10501300880c40a9a836af2647 518 PIRSF PIRSF002869 1 515 1.7E-153 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_3491 a7119e10501300880c40a9a836af2647 518 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 469 19.62 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_3491 a7119e10501300880c40a9a836af2647 518 Pfam PF03023 MviN-like protein 29 476 4.9E-119 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_d0036 ba8684f912cbfed28e64af8e9676547a 482 SUPERFAMILY SSF51905 16 386 1.68E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_d0036 ba8684f912cbfed28e64af8e9676547a 482 SUPERFAMILY SSF54373 234 329 1.7E-10 T 14-10-2018 TMO_d0036 ba8684f912cbfed28e64af8e9676547a 482 Pfam PF04324 BFD-like [2Fe-2S] binding domain 406 457 1.7E-11 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain TMO_d0036 ba8684f912cbfed28e64af8e9676547a 482 Gene3D G3DSA:1.10.10.1100 399 468 9.6E-17 T 14-10-2018 TMO_d0036 ba8684f912cbfed28e64af8e9676547a 482 Pfam PF01266 FAD dependent oxidoreductase 18 365 6.8E-56 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_d0036 ba8684f912cbfed28e64af8e9676547a 482 Gene3D G3DSA:3.30.9.10 101 330 1.0E-93 T 14-10-2018 TMO_d0036 ba8684f912cbfed28e64af8e9676547a 482 Gene3D G3DSA:3.50.50.60 18 363 1.0E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0106 c9689e2dcf1c93bb16bce3552d70ba2b 244 Pfam PF08808 RES domain 79 219 5.9E-30 T 14-10-2018 IPR014914 RES domain TMO_a0106 c9689e2dcf1c93bb16bce3552d70ba2b 244 SMART SM00953 84 211 1.2E-33 T 14-10-2018 IPR014914 RES domain TMO_c0326 d713604b457248f9b3eb11c2e35e7394 83 Hamap MF_00797 UPF0335 protein . 3 80 20.432 T 14-10-2018 IPR018753 Azospirillum phage Cd, Gp10 TMO_c0326 d713604b457248f9b3eb11c2e35e7394 83 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 9 79 6.9E-34 T 14-10-2018 IPR018753 Azospirillum phage Cd, Gp10 TMO_3360 68ff18356731153a92df6831fe165be9 214 PIRSF PIRSF000495 1 214 2.0E-64 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 TMO_3360 68ff18356731153a92df6831fe165be9 214 Pfam PF00117 Glutamine amidotransferase class-I 15 202 7.2E-19 T 14-10-2018 IPR017926 Glutamine amidotransferase TMO_3360 68ff18356731153a92df6831fe165be9 214 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 212 32.606 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 TMO_3360 68ff18356731153a92df6831fe165be9 214 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 211 8.6E-57 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 TMO_3360 68ff18356731153a92df6831fe165be9 214 SUPERFAMILY SSF52317 3 212 6.95E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_3360 68ff18356731153a92df6831fe165be9 214 Gene3D G3DSA:3.40.50.880 1 213 7.1E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_d0067 6bba6563ef1482167f9794ff0cfc13fa 583 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 330 1.0E-39 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TMO_d0067 6bba6563ef1482167f9794ff0cfc13fa 583 SUPERFAMILY SSF52467 186 360 7.12E-59 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_d0067 6bba6563ef1482167f9794ff0cfc13fa 583 Gene3D G3DSA:3.40.50.970 1 175 8.6E-69 T 14-10-2018 TMO_d0067 6bba6563ef1482167f9794ff0cfc13fa 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 542 1.7E-51 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_d0067 6bba6563ef1482167f9794ff0cfc13fa 583 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 564 1.7E-237 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 TMO_d0067 6bba6563ef1482167f9794ff0cfc13fa 583 SUPERFAMILY SSF52518 371 573 6.08E-70 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_d0067 6bba6563ef1482167f9794ff0cfc13fa 583 Gene3D G3DSA:3.40.50.970 364 572 2.3E-69 T 14-10-2018 TMO_d0067 6bba6563ef1482167f9794ff0cfc13fa 583 SUPERFAMILY SSF52518 2 184 1.09E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_d0067 6bba6563ef1482167f9794ff0cfc13fa 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 166 5.2E-57 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TMO_d0067 6bba6563ef1482167f9794ff0cfc13fa 583 Gene3D G3DSA:3.40.50.1220 187 360 1.9E-54 T 14-10-2018 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 Pfam PF00072 Response regulator receiver domain 6 115 1.5E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 SMART SM00382 165 308 2.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 SUPERFAMILY SSF46689 357 476 7.17E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 Pfam PF00158 Sigma-54 interaction domain 145 311 2.6E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 Gene3D G3DSA:1.10.8.60 316 393 1.9E-22 T 14-10-2018 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 Gene3D G3DSA:3.40.50.300 133 315 9.2E-67 T 14-10-2018 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 SUPERFAMILY SSF52172 1 189 8.82E-43 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 474 4.5E-212 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 Gene3D G3DSA:1.10.10.60 394 476 3.7E-21 T 14-10-2018 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 Pfam PF02954 Bacterial regulatory protein, Fis family 434 472 1.3E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 SUPERFAMILY SSF52540 145 386 1.05E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 SMART SM00448 4 115 4.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 8.0E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 8.0E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 Gene3D G3DSA:3.40.50.2300 2 132 1.3E-31 T 14-10-2018 TMO_1704 0a11ea63b4295f2224afb4cf9ce80122 494 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_a0302 8a4a0f4aa04c720acae1bac7e2f7377a 394 SUPERFAMILY SSF51395 7 355 7.33E-109 T 14-10-2018 TMO_a0302 8a4a0f4aa04c720acae1bac7e2f7377a 394 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 350 8.4E-72 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TMO_a0302 8a4a0f4aa04c720acae1bac7e2f7377a 394 Gene3D G3DSA:3.20.20.70 6 373 1.6E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 323 1.0E-94 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.3E-23 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 4.3E-23 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.3E-23 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.3E-23 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 4.3E-23 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 Gene3D G3DSA:1.10.10.350 368 450 4.9E-15 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 SUPERFAMILY SSF48163 282 447 4.58E-26 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 Gene3D G3DSA:3.40.50.620 1 317 2.2E-105 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 450 25.787 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 305 3.5E-74 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TMO_2298 a3198063bceb6b74644c1b3d2ee348a7 451 SUPERFAMILY SSF52374 3 300 1.93E-91 T 14-10-2018 TMO_2658 fec77786ada421553cda83e7351e783f 468 Gene3D G3DSA:3.50.50.60 16 283 4.7E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2658 fec77786ada421553cda83e7351e783f 468 SUPERFAMILY SSF51905 20 425 9.93E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2658 fec77786ada421553cda83e7351e783f 468 PRINTS PR00419 Adrenodoxin reductase family signature 42 55 1.1E-5 T 14-10-2018 TMO_2658 fec77786ada421553cda83e7351e783f 468 PRINTS PR00419 Adrenodoxin reductase family signature 19 41 1.1E-5 T 14-10-2018 TMO_2658 fec77786ada421553cda83e7351e783f 468 Pfam PF01593 Flavin containing amine oxidoreductase 28 283 1.0E-13 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 TMO_2161 c296429f477fe1bae5650b7f18f474b8 101 Pfam PF07883 Cupin domain 27 98 7.6E-7 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_2161 c296429f477fe1bae5650b7f18f474b8 101 SUPERFAMILY SSF51182 15 98 2.39E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_2161 c296429f477fe1bae5650b7f18f474b8 101 Gene3D G3DSA:2.60.120.10 10 101 2.1E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_1522 61c4cd100fe910d5121cfb0dc8bcdbf6 61 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 16 31 - T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 TMO_1522 61c4cd100fe910d5121cfb0dc8bcdbf6 61 Pfam PF01679 Proteolipid membrane potential modulator 11 58 4.6E-23 T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 TMO_1548 ece092efd8f0b9fc2d3e07c75505f347 322 Gene3D G3DSA:1.20.1640.10 114 309 5.3E-13 T 14-10-2018 TMO_1548 ece092efd8f0b9fc2d3e07c75505f347 322 Pfam PF07549 SecD/SecF GG Motif 37 62 1.0E-8 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site TMO_1548 ece092efd8f0b9fc2d3e07c75505f347 322 SUPERFAMILY SSF82866 77 296 1.96E-41 T 14-10-2018 TMO_1548 ece092efd8f0b9fc2d3e07c75505f347 322 Pfam PF02355 Protein export membrane protein 114 297 4.2E-71 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TMO_1548 ece092efd8f0b9fc2d3e07c75505f347 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 119 286 1.8E-57 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_1548 ece092efd8f0b9fc2d3e07c75505f347 322 PRINTS PR01755 Bacterial translocase SecF protein signature 40 55 2.0E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_1548 ece092efd8f0b9fc2d3e07c75505f347 322 PRINTS PR01755 Bacterial translocase SecF protein signature 237 252 2.0E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_1548 ece092efd8f0b9fc2d3e07c75505f347 322 PRINTS PR01755 Bacterial translocase SecF protein signature 205 223 2.0E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_1548 ece092efd8f0b9fc2d3e07c75505f347 322 PRINTS PR01755 Bacterial translocase SecF protein signature 157 171 2.0E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_1548 ece092efd8f0b9fc2d3e07c75505f347 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 13 300 28.647 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TMO_1548 ece092efd8f0b9fc2d3e07c75505f347 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 41 289 1.5E-84 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TMO_0770 19823e9714b0d6aa72d174514d062c95 219 ProSitePatterns PS01081 TetR-type HTH domain signature. 49 80 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_0770 19823e9714b0d6aa72d174514d062c95 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 83 1.1E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0770 19823e9714b0d6aa72d174514d062c95 219 SUPERFAMILY SSF48498 104 216 3.81E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_0770 19823e9714b0d6aa72d174514d062c95 219 Gene3D G3DSA:1.10.357.10 79 214 1.7E-34 T 14-10-2018 TMO_0770 19823e9714b0d6aa72d174514d062c95 219 SUPERFAMILY SSF46689 31 109 6.16E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0770 19823e9714b0d6aa72d174514d062c95 219 Gene3D G3DSA:1.10.10.60 16 78 7.8E-17 T 14-10-2018 TMO_0770 19823e9714b0d6aa72d174514d062c95 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 50 2.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0770 19823e9714b0d6aa72d174514d062c95 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 58 81 2.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2957 02eac0cbd593d84e68861fdef4cf4446 303 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 20 96 7.3E-22 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal TMO_2957 02eac0cbd593d84e68861fdef4cf4446 303 SUPERFAMILY SSF54001 111 282 9.72E-37 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TMO_2957 02eac0cbd593d84e68861fdef4cf4446 303 Gene3D G3DSA:3.10.620.30 123 290 2.0E-33 T 14-10-2018 TMO_2957 02eac0cbd593d84e68861fdef4cf4446 303 SMART SM00460 188 257 1.9E-19 T 14-10-2018 IPR002931 Transglutaminase-like TMO_2957 02eac0cbd593d84e68861fdef4cf4446 303 Pfam PF01841 Transglutaminase-like superfamily 154 255 4.3E-23 T 14-10-2018 IPR002931 Transglutaminase-like TMO_b0504 9a953acfba2922f79d4d3873da935b90 259 SUPERFAMILY SSF46785 3 73 4.39E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0504 9a953acfba2922f79d4d3873da935b90 259 Pfam PF00455 DeoR C terminal sensor domain 75 231 8.2E-53 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain TMO_b0504 9a953acfba2922f79d4d3873da935b90 259 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 8.3E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_b0504 9a953acfba2922f79d4d3873da935b90 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.5E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_b0504 9a953acfba2922f79d4d3873da935b90 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.5E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_b0504 9a953acfba2922f79d4d3873da935b90 259 SMART SM01134 72 233 1.1E-67 T 14-10-2018 TMO_b0504 9a953acfba2922f79d4d3873da935b90 259 Gene3D G3DSA:1.10.10.10 1 54 3.6E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0504 9a953acfba2922f79d4d3873da935b90 259 SUPERFAMILY SSF100950 75 232 6.28E-28 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_b0504 9a953acfba2922f79d4d3873da935b90 259 SMART SM00420 6 58 1.8E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_b0383 e52b99b7e498b6f5890be6b897b6cee7 319 SUPERFAMILY SSF53850 103 309 2.33E-35 T 14-10-2018 TMO_b0383 e52b99b7e498b6f5890be6b897b6cee7 319 Gene3D G3DSA:1.10.10.10 13 102 9.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0383 e52b99b7e498b6f5890be6b897b6cee7 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 2.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0383 e52b99b7e498b6f5890be6b897b6cee7 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 2.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0383 e52b99b7e498b6f5890be6b897b6cee7 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 2.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0383 e52b99b7e498b6f5890be6b897b6cee7 319 Pfam PF03466 LysR substrate binding domain 102 304 2.0E-36 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0383 e52b99b7e498b6f5890be6b897b6cee7 319 Gene3D G3DSA:3.40.190.10 177 280 2.7E-40 T 14-10-2018 TMO_b0383 e52b99b7e498b6f5890be6b897b6cee7 319 SUPERFAMILY SSF46785 7 123 3.49E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0383 e52b99b7e498b6f5890be6b897b6cee7 319 Gene3D G3DSA:3.40.190.10 104 294 2.7E-40 T 14-10-2018 TMO_b0383 e52b99b7e498b6f5890be6b897b6cee7 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 75 1.0E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1434 37892604bedf88919875e87598021d4c 604 Gene3D G3DSA:3.40.50.12780 57 490 5.1E-118 T 14-10-2018 TMO_1434 37892604bedf88919875e87598021d4c 604 SUPERFAMILY SSF56801 42 594 1.31E-147 T 14-10-2018 TMO_1434 37892604bedf88919875e87598021d4c 604 Gene3D G3DSA:3.30.300.310 491 595 2.9E-25 T 14-10-2018 TMO_1434 37892604bedf88919875e87598021d4c 604 Pfam PF00501 AMP-binding enzyme 72 493 8.9E-100 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_1434 37892604bedf88919875e87598021d4c 604 ProSitePatterns PS00455 Putative AMP-binding domain signature. 238 249 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_1434 37892604bedf88919875e87598021d4c 604 Pfam PF13193 AMP-binding enzyme C-terminal domain 504 579 2.4E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0240 956ab773106fcd56458f30de76e62dff 474 Pfam PF01225 Mur ligase family, catalytic domain 11 107 1.1E-28 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TMO_c0240 956ab773106fcd56458f30de76e62dff 474 SUPERFAMILY SSF53244 318 462 4.58E-47 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TMO_c0240 956ab773106fcd56458f30de76e62dff 474 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 8 467 42.518 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0240 956ab773106fcd56458f30de76e62dff 474 Gene3D G3DSA:3.90.190.20 317 471 8.2E-52 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TMO_c0240 956ab773106fcd56458f30de76e62dff 474 SUPERFAMILY SSF51984 11 95 3.53E-27 T 14-10-2018 TMO_c0240 956ab773106fcd56458f30de76e62dff 474 Pfam PF08245 Mur ligase middle domain 113 299 1.6E-26 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TMO_c0240 956ab773106fcd56458f30de76e62dff 474 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 11 461 1.7E-160 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0240 956ab773106fcd56458f30de76e62dff 474 Gene3D G3DSA:3.40.50.720 10 96 6.0E-32 T 14-10-2018 TMO_c0240 956ab773106fcd56458f30de76e62dff 474 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 405 4.1E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TMO_c0240 956ab773106fcd56458f30de76e62dff 474 Gene3D G3DSA:3.40.1190.10 97 316 4.4E-74 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_c0240 956ab773106fcd56458f30de76e62dff 474 SUPERFAMILY SSF53623 94 316 4.71E-67 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 Gene3D G3DSA:3.40.50.20 1 86 2.0E-32 T 14-10-2018 TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 1.3E-35 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 SUPERFAMILY SSF56059 84 352 1.03E-65 T 14-10-2018 TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 Gene3D G3DSA:3.30.1490.20 132 203 5.5E-150 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 Gene3D G3DSA:3.30.470.20 88 443 5.5E-150 T 14-10-2018 TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 SUPERFAMILY SSF51246 332 446 2.51E-38 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 SMART SM00878 337 443 3.7E-51 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 4.0E-73 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 SUPERFAMILY SSF52440 2 114 4.24E-43 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_1151 23a46325cd6e36e9ebbd953f1c6ef112 454 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 7.1E-42 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_2141 125c4ce6445e9bbab4e5592c9ef1828a 272 Pfam PF02535 ZIP Zinc transporter 120 268 8.2E-15 T 14-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 TMO_2003 ee7bc2ce285025c5c089739874e6f677 318 SUPERFAMILY SSF51556 13 270 2.79E-7 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_2003 ee7bc2ce285025c5c089739874e6f677 318 Gene3D G3DSA:2.30.40.10 222 307 7.6E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2003 ee7bc2ce285025c5c089739874e6f677 318 Pfam PF01979 Amidohydrolase family 20 300 1.5E-5 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_2003 ee7bc2ce285025c5c089739874e6f677 318 SUPERFAMILY SSF51338 34 308 2.55E-5 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2237 a89ee2c4cad2884a19a34407347223f8 71 Gene3D G3DSA:3.30.70.100 1 63 3.5E-19 T 14-10-2018 TMO_2237 a89ee2c4cad2884a19a34407347223f8 71 SUPERFAMILY SSF55008 2 66 4.06E-15 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_2237 a89ee2c4cad2884a19a34407347223f8 71 Pfam PF00403 Heavy-metal-associated domain 3 60 2.1E-11 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_c0517 90f041a8aa512539b6ae037872784339 271 Pfam PF01867 CRISPR associated protein Cas1 20 209 3.7E-22 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TMO_c0517 90f041a8aa512539b6ae037872784339 271 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 16 250 4.9E-72 T 14-10-2018 IPR019855 CRISPR-associated protein Cas1, NMENI subtype GO:0004520|GO:0043571|GO:0046872 TMO_c0517 90f041a8aa512539b6ae037872784339 271 Gene3D G3DSA:1.20.120.920 60 259 1.3E-35 T 14-10-2018 TMO_c0517 90f041a8aa512539b6ae037872784339 271 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 19 211 3.9E-22 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TMO_c0767 d062c4c3b5946a41fd171b2cbb2ff314 275 SUPERFAMILY SSF52540 8 250 8.56E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0767 d062c4c3b5946a41fd171b2cbb2ff314 275 SMART SM00382 35 228 9.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0767 d062c4c3b5946a41fd171b2cbb2ff314 275 Pfam PF00005 ABC transporter 26 178 1.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0767 d062c4c3b5946a41fd171b2cbb2ff314 275 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0767 d062c4c3b5946a41fd171b2cbb2ff314 275 Gene3D G3DSA:3.40.50.300 5 252 2.7E-50 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF52777 4958 5213 2.11E-52 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF52777 27 228 2.89E-31 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:1.10.1200.10 484 565 3.2E-11 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:1.10.1200.10 3869 3952 4.6E-23 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:1.10.1200.10 4681 4769 6.2E-18 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF52777 741 975 1.56E-27 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF47336 487 557 5.5E-10 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1143 1154 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF52777 1773 2001 1.22E-46 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3627 3807 5.9E-27 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3008 3118 1.7E-11 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.559.10 585 733 3.4E-20 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.559.10 1587 1955 1.6E-118 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.300.30 2439 2534 2.1E-22 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.559.30 1765 2001 1.6E-118 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF52777 4284 4518 6.0E-42 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF47336 3877 3957 3.27E-18 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF52777 591 747 1.11E-20 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4715 4730 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00501 AMP-binding enzyme 2047 2443 1.1E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00501 AMP-binding enzyme 1008 1395 1.5E-73 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2174 2185 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF51735 3474 3615 1.69E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00550 Phosphopantetheine attachment site 2553 2617 1.1E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00550 Phosphopantetheine attachment site 3969 4031 6.4E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00550 Phosphopantetheine attachment site 4693 4754 2.4E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00550 Phosphopantetheine attachment site 3881 3944 1.7E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00550 Phosphopantetheine attachment site 494 557 1.0E-5 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00550 Phosphopantetheine attachment site 1514 1566 1.6E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3903 3918 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00668 Condensation domain 1585 1997 2.1E-74 T 14-10-2018 IPR001242 Condensation domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00668 Condensation domain 4186 4526 2.7E-41 T 14-10-2018 IPR001242 Condensation domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00668 Condensation domain 4782 5213 6.9E-80 T 14-10-2018 IPR001242 Condensation domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00668 Condensation domain 592 984 9.4E-33 T 14-10-2018 IPR001242 Condensation domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00668 Condensation domain 29 352 1.7E-38 T 14-10-2018 IPR001242 Condensation domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3991 4006 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.559.30 740 991 3.4E-31 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2796 2812 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SMART SM00825 Beta-ketoacyl synthase 2636 3058 1.5E-99 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF56801 2044 2562 3.4E-134 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.559.10 4782 5160 6.1E-121 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2635 2881 1.6E-46 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.40.50.720 3469 3852 3.7E-73 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SMART SM00823 Phosphopantetheine attachment site 489 561 0.0028 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SMART SM00823 Phosphopantetheine attachment site 3967 4036 1.9E-9 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SMART SM00823 Phosphopantetheine attachment site 3879 3948 7.8E-14 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SMART SM00823 Phosphopantetheine attachment site 4691 4760 8.0E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SMART SM00823 Phosphopantetheine attachment site 1498 1570 0.0051 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2066 2465 1.6E-113 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1029 1419 2.7E-95 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.40.50.12780 999 1389 1.7E-107 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF47336 3964 4032 5.1E-17 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF08659 KR domain 3627 3805 1.6E-45 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF47336 1516 1599 3.53E-10 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF13193 AMP-binding enzyme C-terminal domain 1404 1474 5.1E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.40.50.12780 2040 2436 2.3E-121 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF52777 4784 4957 9.23E-43 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF47336 4688 4793 4.06E-14 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF51735 3623 3855 4.96E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.559.10 31 231 1.7E-43 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF56801 966 1486 2.62E-125 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.559.10 4067 4459 1.0E-81 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF53901 2631 2995 1.81E-58 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1525 1540 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF52777 217 456 1.56E-24 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.559.30 241 461 3.1E-23 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF52777 4064 4255 2.56E-20 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF56801 4538 4664 2.88E-17 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.40.47.10 2636 3205 1.7E-157 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.559.30 4258 4515 1.0E-81 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF47336 2549 2618 1.83E-10 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.10.129.110 3243 3468 1.3E-16 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.559.30 4961 5213 6.1E-121 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.70.3050 3111 3196 1.7E-157 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:1.10.1200.10 2535 2625 9.1E-16 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:1.10.1200.10 3953 4037 7.9E-21 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:1.10.1200.10 1487 1571 1.0E-13 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Gene3D G3DSA:3.30.300.30 1390 1486 2.7E-24 T 14-10-2018 TMO_a0603 282456af95ccce853989d922f7cc7495 5215 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2890 3002 1.1E-30 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TMO_a0603 282456af95ccce853989d922f7cc7495 5215 SUPERFAMILY SSF52777 1588 1761 7.45E-42 T 14-10-2018 TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 6.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 6.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 6.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 Gene3D G3DSA:3.40.50.720 1 257 5.7E-80 T 14-10-2018 TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 3.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 Pfam PF00106 short chain dehydrogenase 16 209 1.3E-61 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1379 6f9b1c90df08292b783c90327da51ac8 258 SUPERFAMILY SSF51735 13 255 1.38E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2605 d870e8869d0a1a4121885b4db790ed1c 445 Gene3D G3DSA:1.10.3710.10 333 433 6.4E-31 T 14-10-2018 TMO_2605 d870e8869d0a1a4121885b4db790ed1c 445 Pfam PF12002 MgsA AAA+ ATPase C terminal 255 420 1.9E-66 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal TMO_2605 d870e8869d0a1a4121885b4db790ed1c 445 Pfam PF16193 AAA C-terminal domain 181 254 1.2E-17 T 14-10-2018 IPR032423 AAA C-terminal domain TMO_2605 d870e8869d0a1a4121885b4db790ed1c 445 SUPERFAMILY SSF52540 11 233 5.18E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2605 d870e8869d0a1a4121885b4db790ed1c 445 SUPERFAMILY SSF48019 240 424 7.48E-74 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TMO_2605 d870e8869d0a1a4121885b4db790ed1c 445 SMART SM00382 46 163 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2605 d870e8869d0a1a4121885b4db790ed1c 445 Gene3D G3DSA:3.40.50.300 5 160 8.2E-39 T 14-10-2018 TMO_2605 d870e8869d0a1a4121885b4db790ed1c 445 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 157 7.0E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_2605 d870e8869d0a1a4121885b4db790ed1c 445 Gene3D G3DSA:1.20.272.10 229 332 2.1E-44 T 14-10-2018 TMO_0105 da0d44031fd92d7607c0680fbf97129a 481 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 14 472 1.2E-193 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 TMO_0105 da0d44031fd92d7607c0680fbf97129a 481 SUPERFAMILY SSF101960 35 478 4.58E-139 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily TMO_0105 da0d44031fd92d7607c0680fbf97129a 481 Pfam PF01458 Uncharacterized protein family (UPF0051) 219 452 1.8E-70 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 TMO_3140 a3259f8050b69d596ba6dfc44eca59a8 403 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TMO_3140 a3259f8050b69d596ba6dfc44eca59a8 403 Gene3D G3DSA:3.90.1150.10 14 391 4.3E-110 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_3140 a3259f8050b69d596ba6dfc44eca59a8 403 Pfam PF00155 Aminotransferase class I and II 52 365 1.4E-36 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_3140 a3259f8050b69d596ba6dfc44eca59a8 403 Gene3D G3DSA:3.40.640.10 44 293 4.3E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_3140 a3259f8050b69d596ba6dfc44eca59a8 403 SUPERFAMILY SSF53383 2 401 1.41E-80 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_1744 1c3c1c325d45c4494c962cda8bc07a7e 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1744 1c3c1c325d45c4494c962cda8bc07a7e 282 Pfam PF03466 LysR substrate binding domain 90 265 1.8E-21 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1744 1c3c1c325d45c4494c962cda8bc07a7e 282 Gene3D G3DSA:3.40.190.10 164 254 8.0E-36 T 14-10-2018 TMO_1744 1c3c1c325d45c4494c962cda8bc07a7e 282 Gene3D G3DSA:3.40.190.10 97 259 8.0E-36 T 14-10-2018 TMO_1744 1c3c1c325d45c4494c962cda8bc07a7e 282 Gene3D G3DSA:1.10.10.10 4 94 4.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1744 1c3c1c325d45c4494c962cda8bc07a7e 282 SUPERFAMILY SSF53850 90 280 2.95E-22 T 14-10-2018 TMO_1744 1c3c1c325d45c4494c962cda8bc07a7e 282 SUPERFAMILY SSF46785 3 112 1.59E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0534 bbf0ad83880db8c71c87b74db52f80e3 304 Gene3D G3DSA:3.40.190.10 103 282 2.1E-33 T 14-10-2018 TMO_c0534 bbf0ad83880db8c71c87b74db52f80e3 304 Gene3D G3DSA:3.40.190.10 164 255 2.1E-33 T 14-10-2018 TMO_c0534 bbf0ad83880db8c71c87b74db52f80e3 304 Gene3D G3DSA:1.10.10.10 8 95 3.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0534 bbf0ad83880db8c71c87b74db52f80e3 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.4E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0534 bbf0ad83880db8c71c87b74db52f80e3 304 Pfam PF03466 LysR substrate binding domain 91 286 5.1E-20 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0534 bbf0ad83880db8c71c87b74db52f80e3 304 SUPERFAMILY SSF53850 93 291 9.05E-23 T 14-10-2018 TMO_c0534 bbf0ad83880db8c71c87b74db52f80e3 304 SUPERFAMILY SSF46785 6 114 6.35E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3281 aa3adb3b25e73c057827d724d8340234 313 SMART SM00342 227 310 4.3E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_3281 aa3adb3b25e73c057827d724d8340234 313 SUPERFAMILY SSF46689 264 310 1.34E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_3281 aa3adb3b25e73c057827d724d8340234 313 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 306 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_3281 aa3adb3b25e73c057827d724d8340234 313 Gene3D G3DSA:1.10.10.60 209 313 5.4E-23 T 14-10-2018 TMO_3281 aa3adb3b25e73c057827d724d8340234 313 SUPERFAMILY SSF46689 211 258 2.15E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_3281 aa3adb3b25e73c057827d724d8340234 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 294 2.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_3281 aa3adb3b25e73c057827d724d8340234 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 310 2.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_3281 aa3adb3b25e73c057827d724d8340234 313 Pfam PF12833 Helix-turn-helix domain 233 309 7.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2865 1c9d20cdb2d879b1802448e1e897b7dc 258 Gene3D G3DSA:3.40.190.10 121 213 1.5E-67 T 14-10-2018 TMO_2865 1c9d20cdb2d879b1802448e1e897b7dc 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 7.8E-63 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_2865 1c9d20cdb2d879b1802448e1e897b7dc 258 SUPERFAMILY SSF53850 7 256 1.4E-68 T 14-10-2018 TMO_2865 1c9d20cdb2d879b1802448e1e897b7dc 258 Gene3D G3DSA:3.40.190.10 37 252 1.5E-67 T 14-10-2018 TMO_2865 1c9d20cdb2d879b1802448e1e897b7dc 258 SMART SM00062 35 256 2.3E-56 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_3247 f96db9c563da0493965f0f04435c1396 451 Pfam PF02978 Signal peptide binding domain 329 428 2.5E-32 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TMO_3247 f96db9c563da0493965f0f04435c1396 451 Gene3D G3DSA:1.10.260.30 328 448 2.7E-42 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TMO_3247 f96db9c563da0493965f0f04435c1396 451 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 1.8E-179 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 TMO_3247 f96db9c563da0493965f0f04435c1396 451 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 448 32.742 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 TMO_3247 f96db9c563da0493965f0f04435c1396 451 Gene3D G3DSA:1.20.120.140 5 306 6.5E-116 T 14-10-2018 TMO_3247 f96db9c563da0493965f0f04435c1396 451 SMART SM00382 99 246 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3247 f96db9c563da0493965f0f04435c1396 451 Gene3D G3DSA:3.40.50.300 90 285 6.5E-116 T 14-10-2018 TMO_3247 f96db9c563da0493965f0f04435c1396 451 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 8.2E-21 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TMO_3247 f96db9c563da0493965f0f04435c1396 451 SUPERFAMILY SSF52540 42 355 1.22E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3247 f96db9c563da0493965f0f04435c1396 451 SMART SM00963 1 86 2.6E-35 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TMO_3247 f96db9c563da0493965f0f04435c1396 451 SUPERFAMILY SSF47446 329 429 1.8E-36 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TMO_3247 f96db9c563da0493965f0f04435c1396 451 SMART SM00962 100 296 4.9E-104 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TMO_3247 f96db9c563da0493965f0f04435c1396 451 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 4.4E-68 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 623 657 8.9E-10 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 SMART SM00493 1 122 2.7E-25 T 14-10-2018 IPR006171 TOPRIM domain TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 Gene3D G3DSA:3.30.65.10 613 662 3.2E-5 T 14-10-2018 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 524 538 6.0E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 6.0E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 6.0E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 6.0E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 6.0E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 Pfam PF01751 Toprim domain 3 128 1.5E-16 T 14-10-2018 IPR006171 TOPRIM domain TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 Gene3D G3DSA:3.40.50.140 1 149 7.0E-51 T 14-10-2018 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 Pfam PF01131 DNA topoisomerase 151 592 5.9E-110 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 SUPERFAMILY SSF56712 1 608 6.54E-178 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 SUPERFAMILY SSF57783 622 656 1.67E-9 T 14-10-2018 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 Gene3D G3DSA:2.70.20.10 211 491 2.5E-145 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 SMART SM00437 271 561 1.8E-61 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 Gene3D G3DSA:1.10.460.10 156 605 2.5E-145 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 SMART SM00436 122 217 3.1E-35 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 Gene3D G3DSA:1.10.290.10 280 409 2.5E-145 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 TMO_c0087 c17ec94df6312c3de423e9672ca114d8 676 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 653 9.4E-215 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 TMO_c0808 33e599b36e1a8ee2a5539d151ae9a8b1 391 Gene3D G3DSA:3.90.226.10 95 389 1.1E-56 T 14-10-2018 TMO_c0808 33e599b36e1a8ee2a5539d151ae9a8b1 391 Pfam PF00378 Enoyl-CoA hydratase/isomerase 229 345 4.2E-12 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_c0808 33e599b36e1a8ee2a5539d151ae9a8b1 391 SUPERFAMILY SSF52096 112 388 2.69E-29 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_c0808 33e599b36e1a8ee2a5539d151ae9a8b1 391 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 234 254 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_c0808 33e599b36e1a8ee2a5539d151ae9a8b1 391 Gene3D G3DSA:1.20.58.1300 8 94 1.1E-26 T 14-10-2018 TMO_0741 fc36bd33ac6ac9d58a3dc46555fec542 317 SUPERFAMILY SSF51735 5 315 2.13E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0741 fc36bd33ac6ac9d58a3dc46555fec542 317 Gene3D G3DSA:3.40.50.720 119 299 2.8E-70 T 14-10-2018 TMO_0741 fc36bd33ac6ac9d58a3dc46555fec542 317 Gene3D G3DSA:3.30.1780.10 11 315 2.8E-70 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 TMO_0741 fc36bd33ac6ac9d58a3dc46555fec542 317 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 55 314 3.9E-49 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 TMO_0741 fc36bd33ac6ac9d58a3dc46555fec542 317 PIRSF PIRSF001439 6 317 4.1E-61 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 TMO_3189 9dbabce27ed5e47e577404a8e0ce55e1 267 Gene3D G3DSA:3.30.540.10 10 148 3.6E-36 T 14-10-2018 TMO_3189 9dbabce27ed5e47e577404a8e0ce55e1 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site TMO_3189 9dbabce27ed5e47e577404a8e0ce55e1 267 Pfam PF00459 Inositol monophosphatase family 15 252 3.3E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_3189 9dbabce27ed5e47e577404a8e0ce55e1 267 SUPERFAMILY SSF56655 15 264 5.37E-67 T 14-10-2018 TMO_3189 9dbabce27ed5e47e577404a8e0ce55e1 267 Gene3D G3DSA:3.40.190.80 150 265 4.9E-26 T 14-10-2018 TMO_3189 9dbabce27ed5e47e577404a8e0ce55e1 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 7.8E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_3189 9dbabce27ed5e47e577404a8e0ce55e1 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 7.8E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_3189 9dbabce27ed5e47e577404a8e0ce55e1 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 7.8E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_3189 9dbabce27ed5e47e577404a8e0ce55e1 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 7.8E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_b0431 fc3d1f64e0dfd5810114288bb738ccce 484 SUPERFAMILY SSF53720 4 483 3.01E-160 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_b0431 fc3d1f64e0dfd5810114288bb738ccce 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_b0431 fc3d1f64e0dfd5810114288bb738ccce 484 Gene3D G3DSA:3.40.605.10 16 471 3.0E-176 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_b0431 fc3d1f64e0dfd5810114288bb738ccce 484 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 5 484 1.5E-249 T 14-10-2018 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 TMO_b0431 fc3d1f64e0dfd5810114288bb738ccce 484 Gene3D G3DSA:3.40.309.10 256 449 3.0E-176 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_b0431 fc3d1f64e0dfd5810114288bb738ccce 484 Pfam PF00171 Aldehyde dehydrogenase family 13 480 5.2E-159 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_b0431 fc3d1f64e0dfd5810114288bb738ccce 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_c0176 636271bd2de62c35b321d58a2ed018f6 276 Pfam PF00196 Bacterial regulatory proteins, luxR family 175 225 5.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0176 636271bd2de62c35b321d58a2ed018f6 276 Gene3D G3DSA:1.10.10.10 101 238 2.7E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0176 636271bd2de62c35b321d58a2ed018f6 276 SUPERFAMILY SSF46894 162 228 2.93E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_c0176 636271bd2de62c35b321d58a2ed018f6 276 SMART SM00421 168 225 1.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_a0142 39c3c2f6f65050a430cd283fcefe6632 284 Pfam PF07015 VirC1 protein 50 233 4.9E-16 T 14-10-2018 IPR009744 VirC1 TMO_a0142 39c3c2f6f65050a430cd283fcefe6632 284 Gene3D G3DSA:3.40.50.300 50 266 2.4E-33 T 14-10-2018 TMO_a0142 39c3c2f6f65050a430cd283fcefe6632 284 SUPERFAMILY SSF52540 49 266 7.18E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0123 c8d0d6ba13dd280eec214ffec415ccb7 744 SUPERFAMILY SSF56935 43 744 4.88E-126 T 14-10-2018 TMO_a0123 c8d0d6ba13dd280eec214ffec415ccb7 744 Gene3D G3DSA:2.170.130.10 62 199 2.9E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_a0123 c8d0d6ba13dd280eec214ffec415ccb7 744 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 87 743 1.5E-108 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_a0123 c8d0d6ba13dd280eec214ffec415ccb7 744 Pfam PF00593 TonB dependent receptor 271 742 1.1E-55 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_a0123 c8d0d6ba13dd280eec214ffec415ccb7 744 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 187 1.2E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_a0123 c8d0d6ba13dd280eec214ffec415ccb7 744 Gene3D G3DSA:2.40.170.20 200 744 2.8E-111 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_0552 c7f5eca48c64d8c8926d7f9f59867044 560 SUPERFAMILY SSF158472 210 256 4.71E-8 T 14-10-2018 TMO_0552 c7f5eca48c64d8c8926d7f9f59867044 560 SMART SM00283 300 554 4.4E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0552 c7f5eca48c64d8c8926d7f9f59867044 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 6.4E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0552 c7f5eca48c64d8c8926d7f9f59867044 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 357 6.4E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0552 c7f5eca48c64d8c8926d7f9f59867044 560 SUPERFAMILY SSF58104 275 553 3.58E-52 T 14-10-2018 TMO_0552 c7f5eca48c64d8c8926d7f9f59867044 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 365 523 5.9E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0552 c7f5eca48c64d8c8926d7f9f59867044 560 Gene3D G3DSA:1.10.287.950 268 558 6.3E-46 T 14-10-2018 TMO_0552 c7f5eca48c64d8c8926d7f9f59867044 560 SMART SM00304 210 263 7.3E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0552 c7f5eca48c64d8c8926d7f9f59867044 560 Pfam PF02203 Tar ligand binding domain homologue 1 170 5.7E-13 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 TMO_0552 c7f5eca48c64d8c8926d7f9f59867044 560 Gene3D G3DSA:1.10.8.500 211 262 8.4E-14 T 14-10-2018 TMO_0552 c7f5eca48c64d8c8926d7f9f59867044 560 Pfam PF00672 HAMP domain 211 252 4.9E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_b0145 281c9cb12a774f26d6201f1c374b3f57 224 SUPERFAMILY SSF46689 12 93 1.23E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0145 281c9cb12a774f26d6201f1c374b3f57 224 Gene3D G3DSA:1.10.357.10 22 221 6.4E-63 T 14-10-2018 TMO_b0145 281c9cb12a774f26d6201f1c374b3f57 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 1.4E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0145 281c9cb12a774f26d6201f1c374b3f57 224 SUPERFAMILY SSF48498 92 217 2.13E-29 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_b0145 281c9cb12a774f26d6201f1c374b3f57 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 6.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0145 281c9cb12a774f26d6201f1c374b3f57 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 6.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 335 2.1E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 SUPERFAMILY SSF55785 23 137 6.98E-25 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 SUPERFAMILY SSF55785 129 246 6.14E-20 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00091 134 200 1.6E-5 T 14-10-2018 IPR000014 PAS domain TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00091 12 78 9.9E-12 T 14-10-2018 IPR000014 PAS domain TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 Pfam PF00989 PAS fold 14 125 1.4E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 Gene3D G3DSA:1.10.287.130 245 335 2.5E-24 T 14-10-2018 TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 SUPERFAMILY SSF55874 325 490 6.02E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 133 255 1.7E-16 T 14-10-2018 IPR000014 PAS domain TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 136 3.1E-22 T 14-10-2018 IPR000014 PAS domain TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00388 268 336 4.5E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 SUPERFAMILY SSF47384 254 336 2.75E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 Gene3D G3DSA:3.30.450.20 133 244 2.4E-18 T 14-10-2018 TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 Gene3D G3DSA:3.30.450.20 21 132 1.3E-27 T 14-10-2018 TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00387 380 492 1.4E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 Pfam PF08447 PAS fold 160 239 9.4E-12 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 Gene3D G3DSA:3.30.565.10 339 490 4.4E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00086 206 248 0.0011 T 14-10-2018 IPR001610 PAC motif TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00086 88 129 0.052 T 14-10-2018 IPR001610 PAC motif TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 1.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 1.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0509 6d8e4e36b35d9840cd39f035b12ee9f5 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 490 7.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1153 8fe15a7051eabe84ed39b1172a8e2bc4 260 Pfam PF03746 LamB/YcsF family 6 243 2.5E-87 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 TMO_1153 8fe15a7051eabe84ed39b1172a8e2bc4 260 Gene3D G3DSA:3.20.20.370 5 257 2.3E-89 T 14-10-2018 TMO_1153 8fe15a7051eabe84ed39b1172a8e2bc4 260 SUPERFAMILY SSF88713 6 252 1.41E-85 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_3231 397498a8abed311e748b317aa616ef6c 124 Pfam PF06305 Lipopolysaccharide assembly protein A domain 24 87 3.7E-11 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 TMO_c0804 1451658fc029bb2ff8c64acdaf37f9f4 98 SUPERFAMILY SSF47336 24 97 6.15E-18 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0804 1451658fc029bb2ff8c64acdaf37f9f4 98 Gene3D G3DSA:1.10.1200.10 16 98 3.8E-26 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0804 1451658fc029bb2ff8c64acdaf37f9f4 98 Pfam PF00550 Phosphopantetheine attachment site 31 96 1.9E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0804 1451658fc029bb2ff8c64acdaf37f9f4 98 SMART SM01294 30 96 1.1E-4 T 14-10-2018 TMO_c0804 1451658fc029bb2ff8c64acdaf37f9f4 98 SMART SM00823 Phosphopantetheine attachment site 29 97 6.5E-9 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_3474 8e25d961058140094194383146841efc 642 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 599 7.6E-302 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TMO_3474 8e25d961058140094194383146841efc 642 SUPERFAMILY SSF100934 502 599 4.32E-22 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 Gene3D G3DSA:1.20.1270.10 519 601 3.9E-30 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 SUPERFAMILY SSF53067 186 377 2.07E-68 T 14-10-2018 TMO_3474 8e25d961058140094194383146841efc 642 Gene3D G3DSA:3.90.640.10 224 311 5.9E-166 T 14-10-2018 TMO_3474 8e25d961058140094194383146841efc 642 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 38.024 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TMO_3474 8e25d961058140094194383146841efc 642 Gene3D G3DSA:3.30.420.40 5 374 5.9E-166 T 14-10-2018 TMO_3474 8e25d961058140094194383146841efc 642 Gene3D G3DSA:2.60.34.10 378 518 6.7E-67 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 SUPERFAMILY SSF53067 4 184 3.63E-68 T 14-10-2018 TMO_3474 8e25d961058140094194383146841efc 642 Gene3D G3DSA:3.30.420.40 180 361 5.9E-166 T 14-10-2018 TMO_3474 8e25d961058140094194383146841efc 642 SUPERFAMILY SSF100920 379 535 8.37E-64 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 Pfam PF00012 Hsp70 protein 4 599 3.0E-278 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 197 207 5.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 464 480 5.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 329 345 5.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 54 62 5.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 360 380 5.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 138 158 5.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3474 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 383 402 5.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_a0275 ec78c7c5e0afda67e427c0f50d9eb2bd 244 Pfam PF04172 LrgB-like family 26 241 4.8E-44 T 14-10-2018 IPR007300 CidB/LrgB family TMO_2581 d7f24ab9205fd718e4d55ce281bcc980 301 Gene3D G3DSA:3.40.190.10 92 265 3.2E-32 T 14-10-2018 TMO_2581 d7f24ab9205fd718e4d55ce281bcc980 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.6E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2581 d7f24ab9205fd718e4d55ce281bcc980 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.6E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2581 d7f24ab9205fd718e4d55ce281bcc980 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.6E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2581 d7f24ab9205fd718e4d55ce281bcc980 301 SUPERFAMILY SSF53850 91 282 5.98E-27 T 14-10-2018 TMO_2581 d7f24ab9205fd718e4d55ce281bcc980 301 Gene3D G3DSA:3.40.190.10 162 259 3.2E-32 T 14-10-2018 TMO_2581 d7f24ab9205fd718e4d55ce281bcc980 301 Gene3D G3DSA:1.10.10.10 1 85 1.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2581 d7f24ab9205fd718e4d55ce281bcc980 301 Pfam PF03466 LysR substrate binding domain 87 279 1.4E-27 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2581 d7f24ab9205fd718e4d55ce281bcc980 301 SUPERFAMILY SSF46785 2 84 1.5E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2581 d7f24ab9205fd718e4d55ce281bcc980 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.2E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0442 8cda85ad3224e8331b953cc787058402 456 Pfam PF00202 Aminotransferase class-III 33 447 4.4E-92 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_c0442 8cda85ad3224e8331b953cc787058402 456 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_c0442 8cda85ad3224e8331b953cc787058402 456 Gene3D G3DSA:3.90.1150.10 13 450 2.2E-139 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0442 8cda85ad3224e8331b953cc787058402 456 Gene3D G3DSA:3.40.640.10 68 342 2.2E-139 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0442 8cda85ad3224e8331b953cc787058402 456 PIRSF PIRSF000521 24 453 1.8E-33 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_c0442 8cda85ad3224e8331b953cc787058402 456 SUPERFAMILY SSF53383 13 451 2.74E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_2667 ad84bf08e3501c4b95a78fc2539b1f2b 398 Pfam PF00529 HlyD membrane-fusion protein of T1SS 303 368 2.9E-6 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_2667 ad84bf08e3501c4b95a78fc2539b1f2b 398 Gene3D G3DSA:2.40.420.20 313 381 1.3E-97 T 14-10-2018 TMO_2667 ad84bf08e3501c4b95a78fc2539b1f2b 398 Gene3D G3DSA:1.10.287.470 110 183 1.3E-97 T 14-10-2018 TMO_2667 ad84bf08e3501c4b95a78fc2539b1f2b 398 Gene3D G3DSA:2.40.50.100 75 220 1.3E-97 T 14-10-2018 TMO_2667 ad84bf08e3501c4b95a78fc2539b1f2b 398 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 383 4.9E-84 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_2667 ad84bf08e3501c4b95a78fc2539b1f2b 398 Gene3D G3DSA:2.40.30.170 62 312 1.3E-97 T 14-10-2018 TMO_2667 ad84bf08e3501c4b95a78fc2539b1f2b 398 SUPERFAMILY SSF111369 64 307 3.01E-62 T 14-10-2018 TMO_2667 ad84bf08e3501c4b95a78fc2539b1f2b 398 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 75 302 8.7E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_c0783 b251b88ab6321e891efb784596e967a1 777 SUPERFAMILY SSF48179 342 428 1.53E-10 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_c0783 b251b88ab6321e891efb784596e967a1 777 Pfam PF00378 Enoyl-CoA hydratase/isomerase 476 608 4.3E-9 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_c0783 b251b88ab6321e891efb784596e967a1 777 SUPERFAMILY SSF51735 1 191 1.64E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0783 b251b88ab6321e891efb784596e967a1 777 Gene3D G3DSA:3.40.50.720 1 193 7.8E-62 T 14-10-2018 TMO_c0783 b251b88ab6321e891efb784596e967a1 777 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 366 398 2.3E-4 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_c0783 b251b88ab6321e891efb784596e967a1 777 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 192 293 3.5E-17 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_c0783 b251b88ab6321e891efb784596e967a1 777 SUPERFAMILY SSF48179 191 301 3.06E-20 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_c0783 b251b88ab6321e891efb784596e967a1 777 Gene3D G3DSA:3.90.226.10 472 688 1.5E-28 T 14-10-2018 TMO_c0783 b251b88ab6321e891efb784596e967a1 777 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 190 8.3E-47 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_c0783 b251b88ab6321e891efb784596e967a1 777 Gene3D G3DSA:1.10.1040.10 356 413 3.3E-6 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_c0783 b251b88ab6321e891efb784596e967a1 777 SUPERFAMILY SSF52096 469 774 3.94E-36 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_c0783 b251b88ab6321e891efb784596e967a1 777 Gene3D G3DSA:1.10.1040.10 194 318 1.4E-22 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_2287 64bf54507f9b59081f8e11e0f14ff720 204 Gene3D G3DSA:3.10.290.10 92 187 1.6E-68 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TMO_2287 64bf54507f9b59081f8e11e0f14ff720 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 204 1.2E-72 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TMO_2287 64bf54507f9b59081f8e11e0f14ff720 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2287 64bf54507f9b59081f8e11e0f14ff720 204 Gene3D G3DSA:1.10.1050.10 6 204 1.6E-68 T 14-10-2018 TMO_2287 64bf54507f9b59081f8e11e0f14ff720 204 Pfam PF01479 S4 domain 94 140 4.3E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2287 64bf54507f9b59081f8e11e0f14ff720 204 SMART SM01390 3 92 1.2E-37 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TMO_2287 64bf54507f9b59081f8e11e0f14ff720 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 6 92 2.0E-25 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TMO_2287 64bf54507f9b59081f8e11e0f14ff720 204 SUPERFAMILY SSF55174 7 204 5.5E-61 T 14-10-2018 TMO_2287 64bf54507f9b59081f8e11e0f14ff720 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 31.508 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TMO_2287 64bf54507f9b59081f8e11e0f14ff720 204 SMART SM00363 93 157 1.7E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82866 332 530 2.88E-34 T 14-10-2018 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:1.20.1640.10 54 546 2.2E-248 T 14-10-2018 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82714 751 835 2.35E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82693 82 176 5.23E-18 T 14-10-2018 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82693 178 365 5.23E-17 T 14-10-2018 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82866 832 1055 3.4E-44 T 14-10-2018 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:3.30.70.1430 598 697 2.2E-248 T 14-10-2018 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:3.30.2090.10 749 837 2.2E-248 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 PRINTS PR00702 Acriflavin resistance protein family signature 504 527 7.3E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 PRINTS PR00702 Acriflavin resistance protein family signature 426 450 7.3E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 7.3E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 PRINTS PR00702 Acriflavin resistance protein family signature 372 395 7.3E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 PRINTS PR00702 Acriflavin resistance protein family signature 80 98 7.3E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:3.30.70.1430 82 845 2.2E-248 T 14-10-2018 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:1.20.1640.10 547 1049 2.2E-248 T 14-10-2018 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 Pfam PF00873 AcrB/AcrD/AcrF family 46 1051 1.3E-153 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:3.30.2090.10 221 310 2.2E-248 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82714 227 308 6.02E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:3.30.70.1320 177 368 2.2E-248 T 14-10-2018 TMO_1384 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:3.30.70.1440 698 897 2.2E-248 T 14-10-2018 TMO_0492 ac4012d713aa92b37f3ac7182b2da280 182 SUPERFAMILY SSF88874 4 174 9.81E-47 T 14-10-2018 TMO_0492 ac4012d713aa92b37f3ac7182b2da280 182 Gene3D G3DSA:3.90.1340.10 3 58 5.1E-18 T 14-10-2018 IPR037053 Phage tail collar domain superfamily TMO_0492 ac4012d713aa92b37f3ac7182b2da280 182 Pfam PF07484 Phage Tail Collar Domain 6 62 2.0E-25 T 14-10-2018 IPR011083 Phage tail collar domain TMO_1563 805ea08fc2c086ddf599991cdfaad3e9 336 Gene3D G3DSA:3.40.190.10 118 329 2.0E-119 T 14-10-2018 TMO_1563 805ea08fc2c086ddf599991cdfaad3e9 336 Pfam PF13531 Bacterial extracellular solute-binding protein 40 280 2.7E-37 T 14-10-2018 TMO_1563 805ea08fc2c086ddf599991cdfaad3e9 336 SUPERFAMILY SSF53850 23 331 2.99E-77 T 14-10-2018 TMO_1563 805ea08fc2c086ddf599991cdfaad3e9 336 Gene3D G3DSA:3.40.190.10 30 299 2.0E-119 T 14-10-2018 TMO_1563 805ea08fc2c086ddf599991cdfaad3e9 336 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 22 330 1.9E-133 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 TMO_1563 805ea08fc2c086ddf599991cdfaad3e9 336 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 149 157 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 TMO_0846 1c1abdd33a68dbb0b48b5f010a3f3de6 638 Gene3D G3DSA:3.40.50.12780 58 522 6.0E-95 T 14-10-2018 TMO_0846 1c1abdd33a68dbb0b48b5f010a3f3de6 638 Pfam PF13193 AMP-binding enzyme C-terminal domain 538 615 3.0E-26 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0846 1c1abdd33a68dbb0b48b5f010a3f3de6 638 Pfam PF00501 AMP-binding enzyme 94 528 1.1E-84 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0846 1c1abdd33a68dbb0b48b5f010a3f3de6 638 Gene3D G3DSA:3.30.300.30 524 637 1.4E-28 T 14-10-2018 TMO_0846 1c1abdd33a68dbb0b48b5f010a3f3de6 638 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 39 87 1.0E-14 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 TMO_0846 1c1abdd33a68dbb0b48b5f010a3f3de6 638 SUPERFAMILY SSF56801 29 628 3.14E-155 T 14-10-2018 TMO_0846 1c1abdd33a68dbb0b48b5f010a3f3de6 638 ProSitePatterns PS00455 Putative AMP-binding domain signature. 264 275 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_3388 9dd3c3f611ce4e507fdd66a70b916135 304 Gene3D G3DSA:3.40.50.300 122 183 1.8E-7 T 14-10-2018 TMO_3388 9dd3c3f611ce4e507fdd66a70b916135 304 SUPERFAMILY SSF53795 122 180 3.36E-11 T 14-10-2018 TMO_0269 07eb02f5276c2a98cc268223e0d08d83 259 SUPERFAMILY SSF53639 16 223 8.63E-62 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_0269 07eb02f5276c2a98cc268223e0d08d83 259 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 20 203 6.7E-49 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_0269 07eb02f5276c2a98cc268223e0d08d83 259 Gene3D G3DSA:3.40.225.10 8 259 5.8E-78 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_0269 07eb02f5276c2a98cc268223e0d08d83 259 SMART SM01007 19 203 1.9E-66 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_2258 d6a5a2c357bffa4810989d747a7e2c36 81 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 79 2.0E-33 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TMO_2258 d6a5a2c357bffa4810989d747a7e2c36 81 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 80 2.4E-30 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TMO_2258 d6a5a2c357bffa4810989d747a7e2c36 81 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 10 81 5.0E-15 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TMO_2258 d6a5a2c357bffa4810989d747a7e2c36 81 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 79 23.084 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TMO_2258 d6a5a2c357bffa4810989d747a7e2c36 81 Gene3D G3DSA:3.30.1280.10 1 81 1.5E-32 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_2258 d6a5a2c357bffa4810989d747a7e2c36 81 SUPERFAMILY SSF82697 2 79 1.74E-29 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_3365 fbf279bfa3b8ae52b5b237276106624b 122 PRINTS PR00332 Histidine triad family signature 98 108 7.9E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein TMO_3365 fbf279bfa3b8ae52b5b237276106624b 122 PRINTS PR00332 Histidine triad family signature 8 24 7.9E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein TMO_3365 fbf279bfa3b8ae52b5b237276106624b 122 PRINTS PR00332 Histidine triad family signature 29 47 7.9E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein TMO_3365 fbf279bfa3b8ae52b5b237276106624b 122 ProSitePatterns PS00892 HIT domain signature. 91 109 - T 14-10-2018 IPR019808 Histidine triad, conserved site TMO_3365 fbf279bfa3b8ae52b5b237276106624b 122 Pfam PF01230 HIT domain 14 112 8.7E-26 T 14-10-2018 IPR001310 Histidine triad (HIT) protein TMO_3365 fbf279bfa3b8ae52b5b237276106624b 122 SUPERFAMILY SSF54197 3 116 9.59E-32 T 14-10-2018 IPR036265 HIT-like superfamily TMO_3365 fbf279bfa3b8ae52b5b237276106624b 122 Gene3D G3DSA:3.30.428.10 2 115 2.3E-31 T 14-10-2018 IPR036265 HIT-like superfamily TMO_1180 18256f6ad9d06c56c52dd13334945e90 235 Gene3D G3DSA:3.40.50.12740 9 233 3.8E-43 T 14-10-2018 TMO_1180 18256f6ad9d06c56c52dd13334945e90 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 205 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_1180 18256f6ad9d06c56c52dd13334945e90 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 217 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_1180 18256f6ad9d06c56c52dd13334945e90 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 189 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_1180 18256f6ad9d06c56c52dd13334945e90 235 Pfam PF00196 Bacterial regulatory proteins, luxR family 174 227 3.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_1180 18256f6ad9d06c56c52dd13334945e90 235 Pfam PF00072 Response regulator receiver domain 10 119 1.5E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1180 18256f6ad9d06c56c52dd13334945e90 235 SUPERFAMILY SSF52172 6 125 1.57E-20 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1180 18256f6ad9d06c56c52dd13334945e90 235 SUPERFAMILY SSF46894 172 232 3.4E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_1180 18256f6ad9d06c56c52dd13334945e90 235 SMART SM00421 172 229 3.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_1180 18256f6ad9d06c56c52dd13334945e90 235 SMART SM00448 8 122 7.6E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 Gene3D G3DSA:1.20.140.10 241 385 7.6E-49 T 14-10-2018 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 PIRSF PIRSF016578 137 389 5.7E-14 T 14-10-2018 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 PIRSF PIRSF016578 13 114 6.5E-5 T 14-10-2018 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 4.7E-39 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 2.1E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 4.2E-45 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 SUPERFAMILY SSF47203 235 387 3.54E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 Gene3D G3DSA:2.40.110.10 128 240 2.9E-46 T 14-10-2018 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 Gene3D G3DSA:1.10.540.10 3 127 7.0E-49 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_2579 e8de474d12e32f271594f82efdbd50c2 389 SUPERFAMILY SSF56645 5 249 3.8E-88 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_a0309 a46edf988e8abc7f6a9018f8c04ac269 70 SUPERFAMILY SSF50249 1 69 6.86E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_a0309 a46edf988e8abc7f6a9018f8c04ac269 70 Gene3D G3DSA:2.40.50.140 1 68 2.0E-24 T 14-10-2018 TMO_a0309 a46edf988e8abc7f6a9018f8c04ac269 70 Pfam PF00313 'Cold-shock' DNA-binding domain 3 67 1.0E-23 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_a0309 a46edf988e8abc7f6a9018f8c04ac269 70 SMART SM00357 3 69 1.5E-23 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 TMO_a0309 a46edf988e8abc7f6a9018f8c04ac269 70 PIRSF PIRSF002599 1 70 5.8E-21 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 TMO_a0309 a46edf988e8abc7f6a9018f8c04ac269 70 PRINTS PR00050 Cold shock protein signature 25 34 8.7E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_a0309 a46edf988e8abc7f6a9018f8c04ac269 70 PRINTS PR00050 Cold shock protein signature 4 19 8.7E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_a0309 a46edf988e8abc7f6a9018f8c04ac269 70 PRINTS PR00050 Cold shock protein signature 40 58 8.7E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_b0113 db7bcbe044539bd8f999bcb30d4e6000 280 Pfam PF12697 Alpha/beta hydrolase family 34 269 1.5E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_b0113 db7bcbe044539bd8f999bcb30d4e6000 280 Gene3D G3DSA:3.40.50.1820 9 280 5.4E-82 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0113 db7bcbe044539bd8f999bcb30d4e6000 280 PRINTS PR00412 Epoxide hydrolase signature 254 276 2.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_b0113 db7bcbe044539bd8f999bcb30d4e6000 280 PRINTS PR00412 Epoxide hydrolase signature 60 75 2.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_b0113 db7bcbe044539bd8f999bcb30d4e6000 280 PRINTS PR00412 Epoxide hydrolase signature 119 132 2.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_b0113 db7bcbe044539bd8f999bcb30d4e6000 280 SUPERFAMILY SSF53474 9 278 6.1E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0113 db7bcbe044539bd8f999bcb30d4e6000 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 4.1E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_b0113 db7bcbe044539bd8f999bcb30d4e6000 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 223 237 4.1E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_b0113 db7bcbe044539bd8f999bcb30d4e6000 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 4.1E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_b0113 db7bcbe044539bd8f999bcb30d4e6000 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 4.1E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3271 c5fb4ce1c3c49c47d7c45120c2531c6e 290 SUPERFAMILY SSF51621 5 233 1.03E-66 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_3271 c5fb4ce1c3c49c47d7c45120c2531c6e 290 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 9 223 3.1E-48 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_3271 c5fb4ce1c3c49c47d7c45120c2531c6e 290 Gene3D G3DSA:3.20.20.60 1 289 8.0E-93 T 14-10-2018 TMO_3271 c5fb4ce1c3c49c47d7c45120c2531c6e 290 PIRSF PIRSF015582 1 289 1.5E-78 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like TMO_c0025 1e8a50dc45a00b06b9332bb8ed11577f 322 SUPERFAMILY SSF111369 1 228 7.59E-60 T 14-10-2018 TMO_c0025 1e8a50dc45a00b06b9332bb8ed11577f 322 Gene3D G3DSA:2.40.50.100 1 138 1.6E-64 T 14-10-2018 TMO_c0025 1e8a50dc45a00b06b9332bb8ed11577f 322 Gene3D G3DSA:2.40.420.20 215 307 1.3E-17 T 14-10-2018 TMO_c0025 1e8a50dc45a00b06b9332bb8ed11577f 322 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 1 305 2.5E-69 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_c0025 1e8a50dc45a00b06b9332bb8ed11577f 322 Gene3D G3DSA:2.40.30.170 139 214 1.6E-64 T 14-10-2018 TMO_c0025 1e8a50dc45a00b06b9332bb8ed11577f 322 Gene3D G3DSA:1.10.287.470 28 101 1.6E-64 T 14-10-2018 TMO_c0025 1e8a50dc45a00b06b9332bb8ed11577f 322 Pfam PF13533 Biotin-lipoyl like 1 41 1.1E-12 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TMO_b0247 90365bce4711d80dc3e3af0d3012b16f 83 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 76 2.9E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_b0247 90365bce4711d80dc3e3af0d3012b16f 83 Gene3D G3DSA:3.30.2310.20 1 81 4.3E-16 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_b0456 659e8aa23291338b643912115f526165 184 Pfam PF01814 Hemerythrin HHE cation binding domain 23 153 3.3E-17 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TMO_b0456 659e8aa23291338b643912115f526165 184 Gene3D G3DSA:1.20.120.520 16 174 1.9E-23 T 14-10-2018 TMO_a0402 dbef9664c68966f9a93b9e9a01befb68 247 SUPERFAMILY SSF52540 1 233 8.2E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0402 dbef9664c68966f9a93b9e9a01befb68 247 Gene3D G3DSA:3.40.50.300 1 235 5.9E-63 T 14-10-2018 TMO_a0402 dbef9664c68966f9a93b9e9a01befb68 247 Pfam PF00005 ABC transporter 20 161 8.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0402 dbef9664c68966f9a93b9e9a01befb68 247 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 211 233 3.1E-10 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_a0402 dbef9664c68966f9a93b9e9a01befb68 247 SMART SM00382 26 210 4.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1087 21e200233bec7364cd0117768ef39125 300 Gene3D G3DSA:1.20.1330.10 46 245 1.8E-24 T 14-10-2018 TMO_1087 21e200233bec7364cd0117768ef39125 300 Pfam PF00700 Bacterial flagellin C-terminal helical region 217 299 1.9E-13 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_1087 21e200233bec7364cd0117768ef39125 300 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 139 2.8E-13 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_1087 21e200233bec7364cd0117768ef39125 300 SUPERFAMILY SSF64518 1 300 1.96E-39 T 14-10-2018 TMO_c0869 7988961f103c883c8fbb66198c3236ec 270 Gene3D G3DSA:3.90.226.10 3 211 5.9E-65 T 14-10-2018 TMO_c0869 7988961f103c883c8fbb66198c3236ec 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 269 1.0E-59 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_c0869 7988961f103c883c8fbb66198c3236ec 270 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 111 131 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_c0869 7988961f103c883c8fbb66198c3236ec 270 SUPERFAMILY SSF52096 9 270 1.33E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_c0869 7988961f103c883c8fbb66198c3236ec 270 Gene3D G3DSA:1.10.12.10 212 270 5.4E-22 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_b0065 3f6af182417c5d37da4f0f59624c51da 216 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TMO_b0065 3f6af182417c5d37da4f0f59624c51da 216 SUPERFAMILY SSF51161 25 211 1.03E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_b0065 3f6af182417c5d37da4f0f59624c51da 216 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 150 7.1E-9 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_b0065 3f6af182417c5d37da4f0f59624c51da 216 Gene3D G3DSA:2.160.10.10 6 215 1.7E-70 T 14-10-2018 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 635 4.3E-265 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 4.3E-11 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 269 291 4.3E-11 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 423 445 4.3E-11 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 61 118 1.9E-25 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 4.1E-66 T 14-10-2018 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 251 277 4.1E-66 T 14-10-2018 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 4.1E-66 T 14-10-2018 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 319 331 4.1E-66 T 14-10-2018 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 229 250 4.1E-66 T 14-10-2018 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 424 443 4.1E-66 T 14-10-2018 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 4.1E-66 T 14-10-2018 TMO_1967 861c1640f197713760f07baf80ca8ea3 643 Pfam PF00361 Proton-conducting membrane transporter 130 420 4.6E-93 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_0536 406ddf9e771d4b82de32f3410c0d4d26 335 SUPERFAMILY SSF46689 269 320 2.24E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0536 406ddf9e771d4b82de32f3410c0d4d26 335 Pfam PF01965 DJ-1/PfpI family 5 176 2.1E-28 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_0536 406ddf9e771d4b82de32f3410c0d4d26 335 Pfam PF12833 Helix-turn-helix domain 238 317 8.8E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0536 406ddf9e771d4b82de32f3410c0d4d26 335 SUPERFAMILY SSF52317 5 195 4.01E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_0536 406ddf9e771d4b82de32f3410c0d4d26 335 SMART SM00342 232 315 5.5E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0536 406ddf9e771d4b82de32f3410c0d4d26 335 Gene3D G3DSA:1.10.10.60 216 322 8.8E-23 T 14-10-2018 TMO_0536 406ddf9e771d4b82de32f3410c0d4d26 335 SUPERFAMILY SSF46689 218 265 7.17E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0536 406ddf9e771d4b82de32f3410c0d4d26 335 Gene3D G3DSA:3.40.50.880 2 214 2.6E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_c0667 4a3d58328d09430480bfccea27a197bc 173 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 44 165 1.7E-29 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type TMO_c0667 4a3d58328d09430480bfccea27a197bc 173 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 89 107 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site TMO_c0667 4a3d58328d09430480bfccea27a197bc 173 Gene3D G3DSA:1.10.10.10 39 172 3.2E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0667 4a3d58328d09430480bfccea27a197bc 173 Pfam PF02082 Transcriptional regulator 44 123 9.5E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type TMO_c0667 4a3d58328d09430480bfccea27a197bc 173 SUPERFAMILY SSF46785 44 166 2.39E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0160 02d19d39ee5620ff431dc76cb9c858ce 449 Gene3D G3DSA:1.10.3090.10 165 336 2.3E-26 T 14-10-2018 TMO_c0160 02d19d39ee5620ff431dc76cb9c858ce 449 SUPERFAMILY SSF81891 165 437 4.84E-42 T 14-10-2018 TMO_c0160 02d19d39ee5620ff431dc76cb9c858ce 449 Gene3D G3DSA:3.30.460.10 21 163 1.1E-38 T 14-10-2018 TMO_c0160 02d19d39ee5620ff431dc76cb9c858ce 449 Pfam PF01743 Poly A polymerase head domain 46 167 7.8E-25 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TMO_c0160 02d19d39ee5620ff431dc76cb9c858ce 449 SUPERFAMILY SSF81301 29 163 8.94E-37 T 14-10-2018 TMO_c0160 02d19d39ee5620ff431dc76cb9c858ce 449 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 203 254 1.2E-5 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TMO_0303 2fca56f44dafbf6b48bf604a7f5037fe 236 Gene3D G3DSA:3.40.50.1820 2 227 6.0E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0303 2fca56f44dafbf6b48bf604a7f5037fe 236 Pfam PF01738 Dienelactone hydrolase family 15 226 2.8E-41 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 TMO_0303 2fca56f44dafbf6b48bf604a7f5037fe 236 SUPERFAMILY SSF53474 2 228 2.08E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0459 a25104e3821a8efd3ff5246cf449d5e4 348 SUPERFAMILY SSF102114 20 295 8.63E-72 T 14-10-2018 TMO_b0459 a25104e3821a8efd3ff5246cf449d5e4 348 Pfam PF04055 Radical SAM superfamily 36 197 2.0E-25 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_b0459 a25104e3821a8efd3ff5246cf449d5e4 348 Gene3D G3DSA:3.20.20.70 20 348 1.1E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_b0459 a25104e3821a8efd3ff5246cf449d5e4 348 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 37 48 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_b0459 a25104e3821a8efd3ff5246cf449d5e4 348 Pfam PF06463 Molybdenum Cofactor Synthesis C 203 328 1.1E-33 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_b0459 a25104e3821a8efd3ff5246cf449d5e4 348 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 22 348 37.639 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_b0459 a25104e3821a8efd3ff5246cf449d5e4 348 SMART SM00729 31 232 1.7E-7 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_b0459 a25104e3821a8efd3ff5246cf449d5e4 348 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 22 348 2.3E-103 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_c0898 00f81d3a076f865574f475add47cdb49 231 Gene3D G3DSA:3.90.1340.10 34 93 2.3E-16 T 14-10-2018 IPR037053 Phage tail collar domain superfamily TMO_c0898 00f81d3a076f865574f475add47cdb49 231 Pfam PF07484 Phage Tail Collar Domain 42 97 2.8E-24 T 14-10-2018 IPR011083 Phage tail collar domain TMO_c0898 00f81d3a076f865574f475add47cdb49 231 SUPERFAMILY SSF88874 33 225 4.32E-39 T 14-10-2018 TMO_c0483 f3b9280cb72ac77b120f1af8e38a6d8a 323 Pfam PF13489 Methyltransferase domain 94 227 4.4E-10 T 14-10-2018 TMO_c0483 f3b9280cb72ac77b120f1af8e38a6d8a 323 SUPERFAMILY SSF53335 82 320 3.52E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0483 f3b9280cb72ac77b120f1af8e38a6d8a 323 Gene3D G3DSA:3.40.50.150 74 321 1.4E-27 T 14-10-2018 TMO_b0109 b0e3ff112f34e70d2ecd305a5a4b3ae3 524 Pfam PF00501 AMP-binding enzyme 25 422 2.3E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0109 b0e3ff112f34e70d2ecd305a5a4b3ae3 524 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0109 b0e3ff112f34e70d2ecd305a5a4b3ae3 524 Gene3D G3DSA:3.40.50.12780 14 415 8.5E-103 T 14-10-2018 TMO_b0109 b0e3ff112f34e70d2ecd305a5a4b3ae3 524 SUPERFAMILY SSF56801 18 519 1.57E-134 T 14-10-2018 TMO_b0109 b0e3ff112f34e70d2ecd305a5a4b3ae3 524 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 506 5.1E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0109 b0e3ff112f34e70d2ecd305a5a4b3ae3 524 Gene3D G3DSA:3.30.300.30 417 524 7.4E-28 T 14-10-2018 TMO_0639 2063defd4ea704f989d91c367d8a1379 551 Pfam PF00501 AMP-binding enzyme 35 449 2.2E-99 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0639 2063defd4ea704f989d91c367d8a1379 551 Gene3D G3DSA:3.40.50.12780 6 444 2.0E-134 T 14-10-2018 TMO_0639 2063defd4ea704f989d91c367d8a1379 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0639 2063defd4ea704f989d91c367d8a1379 551 Pfam PF13193 AMP-binding enzyme C-terminal domain 459 533 1.0E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0639 2063defd4ea704f989d91c367d8a1379 551 Gene3D G3DSA:3.30.300.310 445 547 3.5E-32 T 14-10-2018 TMO_0639 2063defd4ea704f989d91c367d8a1379 551 SUPERFAMILY SSF56801 16 545 5.49E-144 T 14-10-2018 TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 SMART SM00448 4 115 9.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 Gene3D G3DSA:1.10.8.60 316 383 2.6E-14 T 14-10-2018 TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 Gene3D G3DSA:1.10.10.60 390 443 3.6E-6 T 14-10-2018 TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 Pfam PF02954 Bacterial regulatory protein, Fis family 399 436 1.4E-4 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 SMART SM00382 165 308 3.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 SUPERFAMILY SSF46689 393 441 8.96E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 Pfam PF00158 Sigma-54 interaction domain 145 311 9.2E-56 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 SUPERFAMILY SSF52540 145 374 2.61E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 SUPERFAMILY SSF52172 4 190 1.85E-37 T 14-10-2018 IPR011006 CheY-like superfamily TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 Gene3D G3DSA:3.40.50.300 136 315 1.0E-55 T 14-10-2018 TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 Pfam PF00072 Response regulator receiver domain 6 112 3.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0153 700e25304bf3eca159e15d13f3f3941a 452 Gene3D G3DSA:3.40.50.2300 2 135 2.7E-31 T 14-10-2018 TMO_1787 2fdd58ef771bd164af3e52c318a533d5 475 SUPERFAMILY SSF75304 3 461 7.98E-111 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1787 2fdd58ef771bd164af3e52c318a533d5 475 Gene3D G3DSA:3.90.1300.10 4 474 3.8E-133 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1787 2fdd58ef771bd164af3e52c318a533d5 475 ProSitePatterns PS00571 Amidases signature. 146 177 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TMO_1787 2fdd58ef771bd164af3e52c318a533d5 475 Pfam PF01425 Amidase 32 453 3.7E-82 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1840 c40e714c1518c2645b47f6e694c33181 377 Pfam PF02769 AIR synthase related protein, C-terminal domain 192 358 8.6E-40 T 14-10-2018 IPR010918 PurM-like, C-terminal domain TMO_1840 c40e714c1518c2645b47f6e694c33181 377 SUPERFAMILY SSF55326 22 184 1.24E-49 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TMO_1840 c40e714c1518c2645b47f6e694c33181 377 Gene3D G3DSA:3.90.650.10 187 374 1.4E-73 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TMO_1840 c40e714c1518c2645b47f6e694c33181 377 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 21 363 45.45 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_1840 c40e714c1518c2645b47f6e694c33181 377 Gene3D G3DSA:3.30.1330.10 20 185 2.0E-69 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TMO_1840 c40e714c1518c2645b47f6e694c33181 377 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 23 352 1.7E-132 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TMO_1840 c40e714c1518c2645b47f6e694c33181 377 SUPERFAMILY SSF56042 188 359 1.5E-57 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TMO_1840 c40e714c1518c2645b47f6e694c33181 377 Pfam PF00586 AIR synthase related protein, N-terminal domain 75 170 2.4E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain TMO_c0302 bbae5b869f5097726b444502c423bbdb 504 SUPERFAMILY SSF47384 202 289 7.65E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0302 bbae5b869f5097726b444502c423bbdb 504 Pfam PF00512 His Kinase A (phospho-acceptor) domain 219 289 2.8E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0302 bbae5b869f5097726b444502c423bbdb 504 SUPERFAMILY SSF55874 278 446 8.64E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0302 bbae5b869f5097726b444502c423bbdb 504 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 445 6.9E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0302 bbae5b869f5097726b444502c423bbdb 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 2.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0302 bbae5b869f5097726b444502c423bbdb 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 445 2.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0302 bbae5b869f5097726b444502c423bbdb 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 2.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0302 bbae5b869f5097726b444502c423bbdb 504 Gene3D G3DSA:1.10.287.130 193 287 5.6E-25 T 14-10-2018 TMO_c0302 bbae5b869f5097726b444502c423bbdb 504 SMART SM00387 335 448 1.5E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0302 bbae5b869f5097726b444502c423bbdb 504 Gene3D G3DSA:3.30.565.10 288 448 5.6E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0302 bbae5b869f5097726b444502c423bbdb 504 SMART SM00388 219 289 1.0E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 SUPERFAMILY SSF56112 772 1066 9.18E-12 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 Gene3D G3DSA:3.90.400.10 134 204 8.8E-219 T 14-10-2018 TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 SUPERFAMILY SSF51445 34 488 1.82E-130 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 Gene3D G3DSA:3.20.20.80 36 484 8.8E-219 T 14-10-2018 TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 Gene3D G3DSA:2.60.40.1180 491 579 1.7E-31 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 SUPERFAMILY SSF51011 496 572 1.73E-18 T 14-10-2018 TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 588 1113 1.2E-142 T 14-10-2018 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 Gene3D G3DSA:3.90.1200.10 837 1125 2.0E-52 T 14-10-2018 TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 36 571 1.7E-284 T 14-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 Pfam PF00128 Alpha amylase, catalytic domain 59 412 6.3E-71 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 Pfam PF16657 Maltogenic Amylase, C-terminal domain 491 567 3.6E-27 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal TMO_a0214 7a870bf75e3917b27cca7ec45ab900b8 1128 SMART SM00642 44 438 5.3E-100 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_1389 68013574044ffce38ac527e7ee817548 346 Gene3D G3DSA:3.40.50.1820 69 337 3.0E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1389 68013574044ffce38ac527e7ee817548 346 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 77 325 9.6E-34 T 14-10-2018 IPR010297 Protein of unknown function DUF900, hydrolase-like TMO_1389 68013574044ffce38ac527e7ee817548 346 SUPERFAMILY SSF53474 83 195 2.74E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0506 6b937b09ce7491680165f865b09d3b7f 369 Gene3D G3DSA:1.20.1250.20 1 369 6.4E-39 T 14-10-2018 TMO_b0506 6b937b09ce7491680165f865b09d3b7f 369 SUPERFAMILY SSF103473 1 368 5.23E-43 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_b0506 6b937b09ce7491680165f865b09d3b7f 369 Pfam PF07690 Major Facilitator Superfamily 5 315 5.1E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 79 90 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 SUPERFAMILY SSF52743 59 356 1.18E-61 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 Gene3D G3DSA:3.40.50.200 56 369 1.4E-65 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 505 802 1.6E-15 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 Pfam PF03797 Autotransporter beta-domain 531 781 6.5E-38 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 PRINTS PR00723 Subtilisin serine protease family (S8) signature 134 147 2.3E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 PRINTS PR00723 Subtilisin serine protease family (S8) signature 317 333 2.3E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 PRINTS PR00723 Subtilisin serine protease family (S8) signature 74 93 2.3E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 SUPERFAMILY SSF103515 509 802 8.37E-40 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 Pfam PF00082 Subtilase family 74 359 1.6E-40 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 138 148 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 SMART SM00869 527 796 2.5E-26 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 Gene3D G3DSA:2.40.128.130 499 801 1.3E-46 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_1323 7f4de4b99d091776d65c364a8871ad0e 802 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 318 328 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site TMO_1964 a2fe46c776cc8b5a0514344abcd2f5fd 270 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 17 260 1.3E-42 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_1964 a2fe46c776cc8b5a0514344abcd2f5fd 270 Gene3D G3DSA:3.30.930.10 10 213 9.6E-44 T 14-10-2018 TMO_1964 a2fe46c776cc8b5a0514344abcd2f5fd 270 SUPERFAMILY SSF55681 13 212 2.06E-43 T 14-10-2018 TMO_1964 a2fe46c776cc8b5a0514344abcd2f5fd 270 Gene3D G3DSA:2.30.30.100 216 261 5.7E-9 T 14-10-2018 TMO_1964 a2fe46c776cc8b5a0514344abcd2f5fd 270 Pfam PF02237 Biotin protein ligase C terminal domain 216 261 6.7E-6 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_1964 a2fe46c776cc8b5a0514344abcd2f5fd 270 Pfam PF03099 Biotin/lipoate A/B protein ligase family 30 151 4.3E-13 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TMO_1964 a2fe46c776cc8b5a0514344abcd2f5fd 270 SUPERFAMILY SSF50037 218 261 1.79E-6 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal TMO_3409 363d1cfbc5d36574bdabceebd9e8cb8b 324 SUPERFAMILY SSF51735 112 269 7.06E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3409 363d1cfbc5d36574bdabceebd9e8cb8b 324 SUPERFAMILY SSF50129 2 144 2.13E-39 T 14-10-2018 IPR011032 GroES-like superfamily TMO_3409 363d1cfbc5d36574bdabceebd9e8cb8b 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 6.7E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_3409 363d1cfbc5d36574bdabceebd9e8cb8b 324 Gene3D G3DSA:3.90.180.10 12 318 2.5E-122 T 14-10-2018 TMO_3409 363d1cfbc5d36574bdabceebd9e8cb8b 324 SMART SM00829 11 322 2.6E-45 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_3409 363d1cfbc5d36574bdabceebd9e8cb8b 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 TMO_3409 363d1cfbc5d36574bdabceebd9e8cb8b 324 Pfam PF00107 Zinc-binding dehydrogenase 151 254 6.5E-30 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_3409 363d1cfbc5d36574bdabceebd9e8cb8b 324 Gene3D G3DSA:3.40.50.720 123 268 2.5E-122 T 14-10-2018 TMO_1447 2485bafd9b982558cae3bb8fe900bc4b 324 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 5 249 5.1E-34 T 14-10-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 TMO_1447 2485bafd9b982558cae3bb8fe900bc4b 324 Gene3D G3DSA:3.40.50.720 1 321 1.6E-67 T 14-10-2018 TMO_1447 2485bafd9b982558cae3bb8fe900bc4b 324 SUPERFAMILY SSF51735 1 319 2.9E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0874 d42a9723163421597e00b1c9304758ac 73 Pfam PF01197 Ribosomal protein L31 1 69 4.4E-25 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_0874 d42a9723163421597e00b1c9304758ac 73 SUPERFAMILY SSF143800 1 71 1.1E-20 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0874 d42a9723163421597e00b1c9304758ac 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 60 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_0874 d42a9723163421597e00b1c9304758ac 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 70 1.5E-29 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_0874 d42a9723163421597e00b1c9304758ac 73 Gene3D G3DSA:2.30.170.50 1 73 3.5E-21 T 14-10-2018 TMO_0874 d42a9723163421597e00b1c9304758ac 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-7 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_0874 d42a9723163421597e00b1c9304758ac 73 PRINTS PR01249 Ribosomal protein L31 signature 50 68 1.4E-7 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF51735 1951 2109 1.11E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.50.720 1965 2107 1.2E-116 T 14-10-2018 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.90.180.10 1853 2159 1.2E-116 T 14-10-2018 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.47.10 14 463 7.1E-195 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF08659 KR domain 2182 2359 1.3E-63 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.50.720 2176 2435 1.1E-68 T 14-10-2018 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00826 934 1093 4.4E-39 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.30.70.3290 479 918 3.0E-138 T 14-10-2018 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF50129 1845 1978 9.43E-31 T 14-10-2018 IPR011032 GroES-like superfamily TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.50.720 1624 1852 1.4E-29 T 14-10-2018 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF47336 2461 2535 5.37E-14 T 14-10-2018 IPR036736 ACP-like superfamily TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF13602 Zinc-binding dehydrogenase 2020 2159 1.1E-21 T 14-10-2018 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF51735 2177 2417 3.36E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00825 Beta-ketoacyl synthase 23 451 4.5E-213 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 186 202 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2182 2362 1.5E-58 T 14-10-2018 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 281 399 7.7E-40 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM01294 2466 2532 1.6E-4 T 14-10-2018 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF14765 Polyketide synthase dehydratase 934 1216 1.3E-65 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.50.150 1387 1597 2.9E-49 T 14-10-2018 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1866 1926 1.6E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF53901 20 448 1.77E-102 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF55048 697 761 2.35E-9 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF53335 1349 1582 6.81E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF08242 Methyltransferase domain 1423 1522 6.8E-17 T 14-10-2018 IPR013217 Methyltransferase type 12 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 573 871 7.6E-109 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF52151 571 863 6.54E-68 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:1.10.1200.10 2451 2536 4.2E-14 T 14-10-2018 IPR036736 ACP-like superfamily TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF51735 1627 1819 2.73E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF00550 Phosphopantetheine attachment site 2467 2532 6.8E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.10.129.110 932 1214 2.2E-66 T 14-10-2018 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00823 Phosphopantetheine attachment site 2465 2536 3.7E-14 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00829 1849 2159 6.7E-172 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 401 529 4.0E-20 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 1586 1597 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF00698 Acyl transferase domain 571 873 7.0E-63 T 14-10-2018 IPR014043 Acyl transferase TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2491 2506 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.366.10 571 874 3.0E-138 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 TMO_0487 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 21 273 3.0E-90 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TMO_1551 bd13d11fca0858e9eabe311471ec12c0 400 Pfam PF13450 NAD(P)-binding Rossmann-like domain 3 69 1.0E-12 T 14-10-2018 TMO_1551 bd13d11fca0858e9eabe311471ec12c0 400 SUPERFAMILY SSF51905 1 398 6.91E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1551 bd13d11fca0858e9eabe311471ec12c0 400 Gene3D G3DSA:3.50.50.60 1 84 6.9E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1551 bd13d11fca0858e9eabe311471ec12c0 400 Pfam PF01593 Flavin containing amine oxidoreductase 343 397 6.3E-9 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 SUPERFAMILY SSF52374 3 667 1.49E-149 T 14-10-2018 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 Pfam PF08264 Anticodon-binding domain of tRNA 703 826 1.2E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 Gene3D G3DSA:3.10.20.590 801 861 1.6E-20 T 14-10-2018 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 Gene3D G3DSA:3.40.50.620 32 573 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 Gene3D G3DSA:1.10.730.10 7 793 0.0 T 14-10-2018 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 SUPERFAMILY SSF50677 225 418 3.77E-44 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 1.2E-45 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 493 511 1.2E-45 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 564 574 1.2E-45 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 1.2E-45 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.2E-45 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 1.2E-45 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 531 553 1.2E-45 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 860 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 SUPERFAMILY SSF47323 664 860 2.8E-29 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 861 22.806 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 657 2.6E-8 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 424 579 8.9E-8 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 12 170 1.7E-22 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 Gene3D G3DSA:3.90.740.10 226 420 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 Gene3D G3DSA:3.10.330.110 574 627 0.0 T 14-10-2018 TMO_3422 ec4324d0ae1b5016895c74ba7c2110ff 861 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 409 3.7E-62 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 190 205 6.0E-41 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 82 97 6.0E-41 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 32 56 6.0E-41 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 370 383 6.0E-41 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 107 119 6.0E-41 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 353 370 6.0E-41 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 8 24 6.0E-41 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 136 152 6.0E-41 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 304 331 6.0E-41 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 SUPERFAMILY SSF51905 8 277 1.04E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 Gene3D G3DSA:3.50.50.60 8 384 4.8E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 PIRSF PIRSF000332 8 435 2.7E-83 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 SUPERFAMILY SSF51905 178 385 3.75E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0519 8b1238d132dfecf23f3bd8f0d900e713 440 Pfam PF00743 Flavin-binding monooxygenase-like 10 429 1.8E-76 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 SUPERFAMILY SSF47323 349 508 4.11E-41 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 5 64 7.5E-8 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 4.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 4.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 271 4.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 223 234 4.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 348 359 4.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 4.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 Gene3D G3DSA:2.170.220.10 118 225 2.6E-154 T 14-10-2018 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 150 508 1.2E-106 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 Gene3D G3DSA:3.40.50.620 7 333 2.6E-154 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 SUPERFAMILY SSF52374 6 347 1.18E-112 T 14-10-2018 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 507 47.462 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 Pfam PF09334 tRNA synthetases class I (M) 148 361 1.0E-66 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1679 b88405cf566ff7c15ddb6882f379afe9 516 Gene3D G3DSA:1.10.730.10 337 513 2.4E-50 T 14-10-2018 TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 SMART SM00924 54 157 2.0E-29 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 SUPERFAMILY SSF158791 28 154 1.31E-26 T 14-10-2018 TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 SUPERFAMILY SSF54631 156 289 5.24E-30 T 14-10-2018 TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 Gene3D G3DSA:1.10.357.20 293 468 1.5E-48 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 Pfam PF01769 Divalent cation transporter 341 461 1.0E-24 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 Pfam PF03448 MgtE intracellular N domain 54 154 3.6E-23 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 Pfam PF00571 CBS domain 222 276 1.5E-8 T 14-10-2018 IPR000644 CBS domain TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 SMART SM00116 228 276 1.5E-4 T 14-10-2018 IPR000644 CBS domain TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 SUPERFAMILY SSF161093 299 468 3.4E-46 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 Gene3D G3DSA:1.25.60.10 26 152 7.4E-18 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 Gene3D G3DSA:3.10.580.10 154 280 1.8E-40 T 14-10-2018 TMO_2591 e4fa9cc19f62225a24f4d95016a3b678 469 TIGRFAM TIGR00400 mgtE: magnesium transporter 29 468 1.2E-92 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 TMO_2119 cd30849fbf7650b24882a67cf0afc798 774 SUPERFAMILY SSF52151 7 389 9.42E-19 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TMO_2119 cd30849fbf7650b24882a67cf0afc798 774 Pfam PF01734 Patatin-like phospholipase 14 341 5.9E-14 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TMO_2119 cd30849fbf7650b24882a67cf0afc798 774 TIGRFAM TIGR03607 TIGR03607: patatin-related protein 5 547 5.7E-125 T 14-10-2018 IPR019894 Patatin-related protein TMO_2119 cd30849fbf7650b24882a67cf0afc798 774 Pfam PF11856 Protein of unknown function (DUF3376) 560 724 6.4E-26 T 14-10-2018 IPR024282 Domain of unknown function DUF3376 TMO_c0292 14d57068b87726867f3d033e1cc984a3 193 Gene3D G3DSA:1.20.1440.20 14 192 1.2E-58 T 14-10-2018 IPR023353 LemA-like domain superfamily TMO_c0292 14d57068b87726867f3d033e1cc984a3 193 SUPERFAMILY SSF140478 24 181 2.35E-48 T 14-10-2018 IPR023353 LemA-like domain superfamily TMO_c0292 14d57068b87726867f3d033e1cc984a3 193 Pfam PF04011 LemA family 5 191 4.5E-62 T 14-10-2018 IPR007156 LemA TMO_3244 d620823c8e7bde8304aedd514e5d13fd 255 SUPERFAMILY SSF53448 15 248 7.66E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_3244 d620823c8e7bde8304aedd514e5d13fd 255 Gene3D G3DSA:3.90.550.10 15 252 5.6E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_3244 d620823c8e7bde8304aedd514e5d13fd 255 Pfam PF00483 Nucleotidyl transferase 16 145 9.3E-16 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 461 1.2E-24 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 Gene3D G3DSA:3.30.390.30 347 466 1.6E-33 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 317 3.0E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 SUPERFAMILY SSF55424 352 467 5.67E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 SUPERFAMILY SSF51905 7 388 5.11E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 5.2E-60 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 5.2E-60 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 5.2E-60 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 5.2E-60 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 5.2E-60 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 5.2E-60 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 5.2E-60 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 5.2E-60 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 5.2E-60 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.0E-27 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 1.0E-27 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 1.0E-27 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 1.0E-27 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 1.0E-27 T 14-10-2018 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 Gene3D G3DSA:3.50.50.60 11 338 6.0E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 PIRSF PIRSF000350 2 469 1.8E-90 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TMO_2719 0506b60493f6ccdeb3fb41ec7ec179fa 486 Gene3D G3DSA:3.50.50.60 149 272 6.0E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0881 b5640a39127e57b5cf48a1fa3bbcc313 306 Gene3D G3DSA:3.20.20.70 21 306 4.0E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_0881 b5640a39127e57b5cf48a1fa3bbcc313 306 SMART SM01133 40 286 1.7E-44 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TMO_0881 b5640a39127e57b5cf48a1fa3bbcc313 306 Pfam PF01791 DeoC/LacD family aldolase 41 286 7.5E-30 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TMO_0881 b5640a39127e57b5cf48a1fa3bbcc313 306 PIRSF PIRSF038992 20 305 3.8E-61 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TMO_0881 b5640a39127e57b5cf48a1fa3bbcc313 306 SUPERFAMILY SSF51569 20 302 3.26E-63 T 14-10-2018 TMO_3246 abb7a4cdb1c15a84d2c107c47a2a1c52 190 Gene3D G3DSA:3.40.50.300 27 171 2.0E-34 T 14-10-2018 TMO_3246 abb7a4cdb1c15a84d2c107c47a2a1c52 190 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 32 155 1.0E-28 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TMO_3246 abb7a4cdb1c15a84d2c107c47a2a1c52 190 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 32 149 1.8E-32 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TMO_3246 abb7a4cdb1c15a84d2c107c47a2a1c52 190 SUPERFAMILY SSF52540 50 142 4.66E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0126 69d2e7bfed07d02b45f09f8261e3e67e 257 Pfam PF01925 Sulfite exporter TauE/SafE 19 249 3.2E-29 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_0348 8f80db338daf0f3abd14f590401bb0f5 312 SUPERFAMILY SSF56349 112 304 2.56E-49 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_0348 8f80db338daf0f3abd14f590401bb0f5 312 Gene3D G3DSA:1.10.443.10 109 309 1.6E-51 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TMO_0348 8f80db338daf0f3abd14f590401bb0f5 312 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 95 2.7E-15 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TMO_0348 8f80db338daf0f3abd14f590401bb0f5 312 Gene3D G3DSA:1.10.150.130 9 104 4.2E-17 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal TMO_0348 8f80db338daf0f3abd14f590401bb0f5 312 Pfam PF00589 Phage integrase family 117 292 4.7E-38 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_0348 8f80db338daf0f3abd14f590401bb0f5 312 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 12 306 50.433 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD TMO_0348 8f80db338daf0f3abd14f590401bb0f5 312 SUPERFAMILY SSF47823 10 104 2.55E-23 T 14-10-2018 TMO_a0326 17017b30538bbc8742cbc9454a43b893 372 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 280 3.1E-48 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TMO_a0326 17017b30538bbc8742cbc9454a43b893 372 SUPERFAMILY SSF51735 1 352 2.22E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1851 400a6575ffd4da527edac26295245f22 344 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 51 330 1.4E-96 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 TMO_1851 400a6575ffd4da527edac26295245f22 344 Gene3D G3DSA:3.40.718.10 3 338 2.3E-116 T 14-10-2018 TMO_1851 400a6575ffd4da527edac26295245f22 344 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 11 334 5.1E-117 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 TMO_1851 400a6575ffd4da527edac26295245f22 344 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 9 337 36.056 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 TMO_1851 400a6575ffd4da527edac26295245f22 344 SUPERFAMILY SSF53659 10 337 1.67E-103 T 14-10-2018 TMO_2024 322ce95debb3ed000fb287a4fb7a5b68 639 SUPERFAMILY SSF52540 14 271 1.05E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2024 322ce95debb3ed000fb287a4fb7a5b68 639 Pfam PF00005 ABC transporter 349 505 1.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2024 322ce95debb3ed000fb287a4fb7a5b68 639 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 557 589 1.4E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_2024 322ce95debb3ed000fb287a4fb7a5b68 639 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 252 288 1.7E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_2024 322ce95debb3ed000fb287a4fb7a5b68 639 Pfam PF00005 ABC transporter 35 200 3.7E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2024 322ce95debb3ed000fb287a4fb7a5b68 639 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2024 322ce95debb3ed000fb287a4fb7a5b68 639 Gene3D G3DSA:3.40.50.300 317 636 2.6E-84 T 14-10-2018 TMO_2024 322ce95debb3ed000fb287a4fb7a5b68 639 Gene3D G3DSA:3.40.50.300 12 301 1.1E-76 T 14-10-2018 TMO_2024 322ce95debb3ed000fb287a4fb7a5b68 639 SMART SM00382 43 250 7.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2024 322ce95debb3ed000fb287a4fb7a5b68 639 SMART SM00382 357 577 2.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2024 322ce95debb3ed000fb287a4fb7a5b68 639 SUPERFAMILY SSF52540 320 577 1.18E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0378 bfdf221e51f30486c704f4d449b64031 379 Gene3D G3DSA:3.30.413.10 264 363 5.8E-24 T 14-10-2018 TMO_0378 bfdf221e51f30486c704f4d449b64031 379 SUPERFAMILY SSF51604 24 145 6.36E-10 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TMO_0378 bfdf221e51f30486c704f4d449b64031 379 Gene3D G3DSA:3.20.20.20 2 263 6.6E-106 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0378 bfdf221e51f30486c704f4d449b64031 379 SUPERFAMILY SSF56014 268 356 1.36E-11 T 14-10-2018 TMO_0378 bfdf221e51f30486c704f4d449b64031 379 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 9 359 33.071 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TMO_0378 bfdf221e51f30486c704f4d449b64031 379 PIRSF PIRSF004640 3 364 9.8E-146 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TMO_0378 bfdf221e51f30486c704f4d449b64031 379 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 11 355 2.8E-134 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TMO_0378 bfdf221e51f30486c704f4d449b64031 379 Pfam PF04551 GcpE protein 15 355 6.8E-131 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TMO_0889 5cb83ca500e0320e78ab60126cf81edb 281 Pfam PF00710 Asparaginase, N-terminal 2 168 5.8E-32 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 TMO_0889 5cb83ca500e0320e78ab60126cf81edb 281 SUPERFAMILY SSF53774 2 281 3.53E-56 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 TMO_0889 5cb83ca500e0320e78ab60126cf81edb 281 PIRSF PIRSF500176 1 281 2.7E-49 T 14-10-2018 TMO_0889 5cb83ca500e0320e78ab60126cf81edb 281 Gene3D G3DSA:3.40.50.40 180 281 5.3E-20 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 TMO_0889 5cb83ca500e0320e78ab60126cf81edb 281 SMART SM00870 2 281 7.1E-32 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TMO_0889 5cb83ca500e0320e78ab60126cf81edb 281 PRINTS PR00139 Asparaginase/glutaminase family signature 229 247 3.0E-8 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TMO_0889 5cb83ca500e0320e78ab60126cf81edb 281 PRINTS PR00139 Asparaginase/glutaminase family signature 74 92 3.0E-8 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TMO_0889 5cb83ca500e0320e78ab60126cf81edb 281 PRINTS PR00139 Asparaginase/glutaminase family signature 3 14 3.0E-8 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TMO_0889 5cb83ca500e0320e78ab60126cf81edb 281 Gene3D G3DSA:3.40.50.1170 1 173 2.4E-36 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 TMO_0889 5cb83ca500e0320e78ab60126cf81edb 281 PIRSF PIRSF001220 1 281 4.1E-41 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 SUPERFAMILY SSF55008 233 303 1.44E-12 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 SUPERFAMILY SSF56784 625 924 5.9E-54 T 14-10-2018 IPR036412 HAD-like superfamily TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 Pfam PF00122 E1-E2 ATPase 425 606 1.5E-54 T 14-10-2018 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 SUPERFAMILY SSF55008 163 227 2.36E-10 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 Pfam PF00702 haloacid dehalogenase-like hydrolase 623 838 6.2E-42 T 14-10-2018 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 PRINTS PR00941 Cadmium-transporting ATPase signature 355 367 6.5E-16 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 PRINTS PR00941 Cadmium-transporting ATPase signature 409 429 6.5E-16 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 PRINTS PR00941 Cadmium-transporting ATPase signature 167 176 6.5E-16 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 PRINTS PR00941 Cadmium-transporting ATPase signature 510 524 6.5E-16 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 PRINTS PR00941 Cadmium-transporting ATPase signature 491 507 6.5E-16 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 SUPERFAMILY SSF81653 427 525 2.62E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 Gene3D G3DSA:3.40.1110.10 637 756 3.6E-86 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 356 927 4.0E-121 T 14-10-2018 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 SUPERFAMILY SSF55008 64 126 2.36E-9 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 397 908 1.2E-79 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 Gene3D G3DSA:3.40.50.1000 607 877 3.6E-86 T 14-10-2018 IPR023214 HAD superfamily TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 Gene3D G3DSA:3.30.70.100 159 231 7.0E-6 T 14-10-2018 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 Gene3D G3DSA:3.30.70.100 55 132 2.2E-6 T 14-10-2018 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 374 927 3.6E-180 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 848 860 2.2E-23 T 14-10-2018 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 475 489 2.2E-23 T 14-10-2018 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 771 781 2.2E-23 T 14-10-2018 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 824 843 2.2E-23 T 14-10-2018 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 640 2.2E-23 T 14-10-2018 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 628 634 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 Gene3D G3DSA:2.70.150.20 418 529 3.9E-36 T 14-10-2018 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 SUPERFAMILY SSF55008 1 56 2.88E-8 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 SUPERFAMILY SSF81665 373 614 1.31E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 Pfam PF00403 Heavy-metal-associated domain 237 294 6.5E-6 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 Pfam PF00403 Heavy-metal-associated domain 66 111 3.4E-6 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 Pfam PF00403 Heavy-metal-associated domain 166 217 8.4E-5 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_c0083 6e285ebb16a70889d9d92b47d93fe304 933 Gene3D G3DSA:3.30.70.100 232 300 2.5E-9 T 14-10-2018 TMO_1256 c1b8814ded9d62a8b5957264f8f31eb0 344 PIRSF PIRSF000294 1 344 1.2E-147 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 TMO_1256 c1b8814ded9d62a8b5957264f8f31eb0 344 Pfam PF03150 Di-haem cytochrome c peroxidase 51 200 3.3E-50 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 TMO_1256 c1b8814ded9d62a8b5957264f8f31eb0 344 Gene3D G3DSA:1.10.760.10 187 324 5.1E-111 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_1256 c1b8814ded9d62a8b5957264f8f31eb0 344 SUPERFAMILY SSF46626 32 188 2.83E-53 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_1256 c1b8814ded9d62a8b5957264f8f31eb0 344 Pfam PF00034 Cytochrome c 209 321 1.8E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1256 c1b8814ded9d62a8b5957264f8f31eb0 344 Gene3D G3DSA:1.10.760.10 47 186 5.1E-111 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_1256 c1b8814ded9d62a8b5957264f8f31eb0 344 SUPERFAMILY SSF46626 187 341 3.81E-43 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_2841 98434dfe3c90d296ec6f2b3a4d1693a5 273 Pfam PF01522 Polysaccharide deacetylase 44 149 7.6E-24 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 TMO_2841 98434dfe3c90d296ec6f2b3a4d1693a5 273 SUPERFAMILY SSF88713 5 265 2.43E-64 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_2841 98434dfe3c90d296ec6f2b3a4d1693a5 273 Gene3D G3DSA:3.20.20.370 6 268 3.3E-79 T 14-10-2018 TMO_1817 8ff6f730bd00a182255a61fd777b942b 189 Pfam PF16157 Domain of unknown function (DUF4865) 1 183 7.8E-58 T 14-10-2018 IPR032349 Protein of unknown function DUF4865 TMO_1817 8ff6f730bd00a182255a61fd777b942b 189 SUPERFAMILY SSF54909 3 78 9.39E-7 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_1817 8ff6f730bd00a182255a61fd777b942b 189 Gene3D G3DSA:3.30.70.100 98 181 8.8E-7 T 14-10-2018 TMO_3299 008f7eb33ad9c63fdae5f0a6a8c3013a 326 Gene3D G3DSA:3.40.190.10 185 278 1.6E-58 T 14-10-2018 TMO_3299 008f7eb33ad9c63fdae5f0a6a8c3013a 326 Gene3D G3DSA:1.10.10.10 23 108 1.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3299 008f7eb33ad9c63fdae5f0a6a8c3013a 326 SUPERFAMILY SSF46785 26 135 8.44E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3299 008f7eb33ad9c63fdae5f0a6a8c3013a 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3299 008f7eb33ad9c63fdae5f0a6a8c3013a 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 65 76 3.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3299 008f7eb33ad9c63fdae5f0a6a8c3013a 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 65 3.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3299 008f7eb33ad9c63fdae5f0a6a8c3013a 326 Pfam PF03466 LysR substrate binding domain 111 303 1.8E-31 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_3299 008f7eb33ad9c63fdae5f0a6a8c3013a 326 SUPERFAMILY SSF53850 112 305 4.19E-29 T 14-10-2018 TMO_3299 008f7eb33ad9c63fdae5f0a6a8c3013a 326 Gene3D G3DSA:3.40.190.10 119 282 1.6E-58 T 14-10-2018 TMO_3299 008f7eb33ad9c63fdae5f0a6a8c3013a 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 30 88 3.3E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3057 877b6926f05d9f935cd9d6114eb132cf 880 Gene3D G3DSA:3.40.50.300 4 148 2.0E-26 T 14-10-2018 TMO_3057 877b6926f05d9f935cd9d6114eb132cf 880 Pfam PF00271 Helicase conserved C-terminal domain 169 268 1.1E-8 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_3057 877b6926f05d9f935cd9d6114eb132cf 880 SUPERFAMILY SSF52540 13 119 1.27E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3057 877b6926f05d9f935cd9d6114eb132cf 880 SUPERFAMILY SSF52540 148 385 8.75E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3057 877b6926f05d9f935cd9d6114eb132cf 880 SMART SM00490 181 270 6.0E-15 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_3057 877b6926f05d9f935cd9d6114eb132cf 880 Gene3D G3DSA:3.40.50.300 151 304 5.6E-33 T 14-10-2018 TMO_c0784 822ed4e2f086c7ea3f27480d68cc7220 379 SUPERFAMILY SSF53901 1 252 1.13E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0784 822ed4e2f086c7ea3f27480d68cc7220 379 Pfam PF02803 Thiolase, C-terminal domain 256 377 6.9E-47 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_c0784 822ed4e2f086c7ea3f27480d68cc7220 379 ProSitePatterns PS00737 Thiolases signature 2. 325 341 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 TMO_c0784 822ed4e2f086c7ea3f27480d68cc7220 379 PIRSF PIRSF000429 1 379 6.2E-127 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_c0784 822ed4e2f086c7ea3f27480d68cc7220 379 Gene3D G3DSA:3.40.47.10 128 376 5.9E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0784 822ed4e2f086c7ea3f27480d68cc7220 379 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 377 6.9E-134 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_c0784 822ed4e2f086c7ea3f27480d68cc7220 379 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 TMO_c0784 822ed4e2f086c7ea3f27480d68cc7220 379 SUPERFAMILY SSF53901 257 377 7.54E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0784 822ed4e2f086c7ea3f27480d68cc7220 379 Pfam PF00108 Thiolase, N-terminal domain 4 249 3.1E-68 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_c0784 822ed4e2f086c7ea3f27480d68cc7220 379 Gene3D G3DSA:3.40.47.10 6 262 5.9E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0512 659adfd3021039ae7d5821221c39cd8b 227 SUPERFAMILY SSF51182 4 125 8.42E-32 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0512 659adfd3021039ae7d5821221c39cd8b 227 Gene3D G3DSA:2.60.120.10 2 222 1.1E-69 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_c0512 659adfd3021039ae7d5821221c39cd8b 227 SUPERFAMILY SSF51182 129 219 1.81E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0512 659adfd3021039ae7d5821221c39cd8b 227 Pfam PF12973 ChrR Cupin-like domain 135 215 2.9E-13 T 14-10-2018 IPR025979 ChrR-like cupin domain TMO_c0512 659adfd3021039ae7d5821221c39cd8b 227 Pfam PF12973 ChrR Cupin-like domain 19 108 2.9E-37 T 14-10-2018 IPR025979 ChrR-like cupin domain TMO_1770 7ad1ab2206f327f117af33f890c03b56 279 Gene3D G3DSA:2.160.10.10 4 198 1.1E-49 T 14-10-2018 TMO_1770 7ad1ab2206f327f117af33f890c03b56 279 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 157 185 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TMO_1770 7ad1ab2206f327f117af33f890c03b56 279 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 24 52 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TMO_1770 7ad1ab2206f327f117af33f890c03b56 279 Gene3D G3DSA:1.20.1180.10 201 268 5.8E-14 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 TMO_1770 7ad1ab2206f327f117af33f890c03b56 279 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 184 264 1.3E-21 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 TMO_1770 7ad1ab2206f327f117af33f890c03b56 279 PIRSF PIRSF000456 8 275 3.0E-100 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 TMO_1770 7ad1ab2206f327f117af33f890c03b56 279 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 21 56 4.2E-9 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_1770 7ad1ab2206f327f117af33f890c03b56 279 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 113 147 1.5E-7 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_1770 7ad1ab2206f327f117af33f890c03b56 279 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 12 266 3.5E-101 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 TMO_1770 7ad1ab2206f327f117af33f890c03b56 279 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 9 268 43.685 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 TMO_1770 7ad1ab2206f327f117af33f890c03b56 279 SUPERFAMILY SSF51161 8 258 1.7E-69 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_1853 7ae7ced77d182dd8c5fb45b4e3f0336e 329 Gene3D G3DSA:1.20.58.1130 7 209 1.1E-84 T 14-10-2018 TMO_1853 7ae7ced77d182dd8c5fb45b4e3f0336e 329 Pfam PF01699 Sodium/calcium exchanger protein 3 142 2.9E-22 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 TMO_1853 7ae7ced77d182dd8c5fb45b4e3f0336e 329 Pfam PF01699 Sodium/calcium exchanger protein 178 318 3.1E-30 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 TMO_1853 7ae7ced77d182dd8c5fb45b4e3f0336e 329 Gene3D G3DSA:1.20.1420.30 33 311 1.1E-84 T 14-10-2018 TMO_1853 7ae7ced77d182dd8c5fb45b4e3f0336e 329 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 313 1.5E-72 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 TMO_0794 351d4c806053fc70a3327668699ef933 268 SUPERFAMILY SSF51735 10 254 1.4E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0794 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0794 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0794 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0794 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0794 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0794 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0794 351d4c806053fc70a3327668699ef933 268 Gene3D G3DSA:3.40.50.720 3 260 6.0E-78 T 14-10-2018 TMO_0794 351d4c806053fc70a3327668699ef933 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 252 8.6E-60 T 14-10-2018 TMO_1470 362663401956ab4fb372e8a630ff3af6 401 Pfam PF12838 4Fe-4S dicluster domain 251 339 6.2E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_1470 362663401956ab4fb372e8a630ff3af6 401 Pfam PF12838 4Fe-4S dicluster domain 165 236 7.7E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_1470 362663401956ab4fb372e8a630ff3af6 401 SUPERFAMILY SSF54862 155 377 6.38E-50 T 14-10-2018 TMO_1470 362663401956ab4fb372e8a630ff3af6 401 Gene3D G3DSA:2.40.40.20 1 75 6.8E-8 T 14-10-2018 TMO_1470 362663401956ab4fb372e8a630ff3af6 401 SUPERFAMILY SSF50692 4 63 9.49E-10 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TMO_1470 362663401956ab4fb372e8a630ff3af6 401 Gene3D G3DSA:3.30.70.20 247 384 3.0E-28 T 14-10-2018 TMO_1470 362663401956ab4fb372e8a630ff3af6 401 Gene3D G3DSA:3.30.70.20 154 246 3.9E-18 T 14-10-2018 TMO_1470 362663401956ab4fb372e8a630ff3af6 401 Pfam PF01568 Molydopterin dinucleotide binding domain 6 60 1.7E-6 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TMO_3208 ef75fdb37754fd626914d062ffb00359 168 Gene3D G3DSA:3.40.630.30 3 162 1.5E-38 T 14-10-2018 TMO_3208 ef75fdb37754fd626914d062ffb00359 168 Pfam PF13508 Acetyltransferase (GNAT) domain 79 149 2.1E-6 T 14-10-2018 IPR000182 GNAT domain TMO_3208 ef75fdb37754fd626914d062ffb00359 168 SUPERFAMILY SSF55729 64 160 1.67E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_1394 ce0aa0bca7f35cd333df1f9918af5764 277 Pfam PF00582 Universal stress protein family 210 275 2.5E-10 T 14-10-2018 IPR006016 UspA TMO_1394 ce0aa0bca7f35cd333df1f9918af5764 277 Gene3D G3DSA:3.40.50.12370 3 276 7.0E-24 T 14-10-2018 TMO_1394 ce0aa0bca7f35cd333df1f9918af5764 277 SUPERFAMILY SSF52402 157 275 3.6E-18 T 14-10-2018 TMO_1394 ce0aa0bca7f35cd333df1f9918af5764 277 PRINTS PR01438 Universal stress protein signature 156 174 6.0E-6 T 14-10-2018 IPR006015 Universal stress protein A TMO_1394 ce0aa0bca7f35cd333df1f9918af5764 277 PRINTS PR01438 Universal stress protein signature 237 249 6.0E-6 T 14-10-2018 IPR006015 Universal stress protein A TMO_1394 ce0aa0bca7f35cd333df1f9918af5764 277 PRINTS PR01438 Universal stress protein signature 255 277 6.0E-6 T 14-10-2018 IPR006015 Universal stress protein A TMO_a0349 ea5bae0e1531cd15b9675aa0c5baa4c6 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 441 1.3E-79 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_a0349 ea5bae0e1531cd15b9675aa0c5baa4c6 527 PIRSF PIRSF002741 1 523 1.5E-88 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_a0349 ea5bae0e1531cd15b9675aa0c5baa4c6 527 SUPERFAMILY SSF53850 35 526 2.67E-115 T 14-10-2018 TMO_a0349 ea5bae0e1531cd15b9675aa0c5baa4c6 527 Gene3D G3DSA:3.90.76.10 54 201 9.9E-110 T 14-10-2018 TMO_a0349 ea5bae0e1531cd15b9675aa0c5baa4c6 527 Gene3D G3DSA:3.40.190.10 202 513 9.9E-110 T 14-10-2018 TMO_a0349 ea5bae0e1531cd15b9675aa0c5baa4c6 527 Gene3D G3DSA:3.10.105.10 293 503 9.9E-110 T 14-10-2018 TMO_a0266 b05aabfe247817ca59ccbeab1f113b8e 223 Gene3D G3DSA:3.40.50.150 29 210 2.4E-40 T 14-10-2018 TMO_a0266 b05aabfe247817ca59ccbeab1f113b8e 223 Pfam PF13578 Methyltransferase domain 82 189 6.4E-15 T 14-10-2018 TMO_a0266 b05aabfe247817ca59ccbeab1f113b8e 223 SUPERFAMILY SSF53335 44 198 1.57E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_3355 06397e246aee0db28368ef8a20b60f43 240 Pfam PF13302 Acetyltransferase (GNAT) domain 45 182 1.2E-13 T 14-10-2018 IPR000182 GNAT domain TMO_3355 06397e246aee0db28368ef8a20b60f43 240 SUPERFAMILY SSF55729 39 207 6.95E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_3355 06397e246aee0db28368ef8a20b60f43 240 Gene3D G3DSA:3.40.630.30 25 239 1.1E-57 T 14-10-2018 TMO_0259 8ddf9039386927c56a3fa34e681fdaeb 328 SUPERFAMILY SSF46689 262 311 2.69E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0259 8ddf9039386927c56a3fa34e681fdaeb 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 291 8.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_0259 8ddf9039386927c56a3fa34e681fdaeb 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 307 8.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_0259 8ddf9039386927c56a3fa34e681fdaeb 328 SMART SM00342 225 307 5.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0259 8ddf9039386927c56a3fa34e681fdaeb 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 262 303 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_0259 8ddf9039386927c56a3fa34e681fdaeb 328 Gene3D G3DSA:1.10.10.60 205 310 9.4E-21 T 14-10-2018 TMO_0259 8ddf9039386927c56a3fa34e681fdaeb 328 Pfam PF12833 Helix-turn-helix domain 231 308 2.9E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0775 13a3ad22b68321c3cc5f6cb420d7c033 653 SUPERFAMILY SSF52402 229 602 1.83E-30 T 14-10-2018 TMO_c0775 13a3ad22b68321c3cc5f6cb420d7c033 653 SUPERFAMILY SSF56235 62 233 3.67E-29 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_c0775 13a3ad22b68321c3cc5f6cb420d7c033 653 Pfam PF00733 Asparagine synthase 251 617 7.9E-29 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_c0775 13a3ad22b68321c3cc5f6cb420d7c033 653 Gene3D G3DSA:3.60.20.10 25 234 8.2E-31 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_c0775 13a3ad22b68321c3cc5f6cb420d7c033 653 Pfam PF13537 Glutamine amidotransferase domain 64 176 2.1E-20 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TMO_c0775 13a3ad22b68321c3cc5f6cb420d7c033 653 PIRSF PIRSF001589 5 638 1.2E-53 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_c0836 75648353b82b15d2f659c2b11ebced12 768 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 180 3.8E-22 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_c0836 75648353b82b15d2f659c2b11ebced12 768 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 61 768 3.0E-99 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 TMO_c0836 75648353b82b15d2f659c2b11ebced12 768 Gene3D G3DSA:2.170.130.10 59 185 5.2E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_c0836 75648353b82b15d2f659c2b11ebced12 768 Pfam PF00593 TonB dependent receptor 314 766 5.1E-48 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_c0836 75648353b82b15d2f659c2b11ebced12 768 Gene3D G3DSA:2.40.170.20 200 768 9.0E-100 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_c0836 75648353b82b15d2f659c2b11ebced12 768 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 751 768 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site TMO_c0836 75648353b82b15d2f659c2b11ebced12 768 SUPERFAMILY SSF56935 54 768 2.09E-99 T 14-10-2018 TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 Gene3D G3DSA:3.30.420.40 156 326 7.2E-116 T 14-10-2018 TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 Gene3D G3DSA:3.30.420.40 21 348 7.2E-116 T 14-10-2018 TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 18 368 61.967 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 SUPERFAMILY SSF53067 131 342 7.92E-42 T 14-10-2018 TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 296 305 9.1E-45 T 14-10-2018 IPR017861 Kae1/TsaD family TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 104 124 9.1E-45 T 14-10-2018 IPR017861 Kae1/TsaD family TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 125 144 9.1E-45 T 14-10-2018 IPR017861 Kae1/TsaD family TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 181 202 9.1E-45 T 14-10-2018 IPR017861 Kae1/TsaD family TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 21 34 9.1E-45 T 14-10-2018 IPR017861 Kae1/TsaD family TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 170 9.1E-45 T 14-10-2018 IPR017861 Kae1/TsaD family TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 SUPERFAMILY SSF53067 20 151 2.52E-29 T 14-10-2018 TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 21 339 1.0E-94 T 14-10-2018 IPR017861 Kae1/TsaD family TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 21 346 9.3E-120 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TMO_0086 1f8b4e27497cbb3c28ced08d4d884fae 385 Pfam PF00814 Glycoprotease family 52 340 9.9E-97 T 14-10-2018 IPR000905 Gcp-like domain TMO_3321 96c3ecd69fc73c4f3e82387ef411ea1f 394 PIRSF PIRSF000521 167 393 1.9E-34 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_3321 96c3ecd69fc73c4f3e82387ef411ea1f 394 PIRSF PIRSF000521 6 154 3.2E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_3321 96c3ecd69fc73c4f3e82387ef411ea1f 394 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 8 393 67.735 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 TMO_3321 96c3ecd69fc73c4f3e82387ef411ea1f 394 SUPERFAMILY SSF53383 9 391 2.39E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_3321 96c3ecd69fc73c4f3e82387ef411ea1f 394 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 9 390 7.6E-132 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 TMO_3321 96c3ecd69fc73c4f3e82387ef411ea1f 394 Gene3D G3DSA:3.90.1150.10 17 383 9.2E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_3321 96c3ecd69fc73c4f3e82387ef411ea1f 394 Pfam PF00202 Aminotransferase class-III 15 389 1.2E-100 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_3321 96c3ecd69fc73c4f3e82387ef411ea1f 394 Gene3D G3DSA:3.40.640.10 52 298 9.2E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_3321 96c3ecd69fc73c4f3e82387ef411ea1f 394 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 216 253 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_1858 8ece8b835bc7dc7d1ca27821299e740e 292 SUPERFAMILY SSF53807 32 276 2.16E-33 T 14-10-2018 TMO_1858 8ece8b835bc7dc7d1ca27821299e740e 292 Gene3D G3DSA:3.40.50.1980 27 152 4.5E-17 T 14-10-2018 TMO_1858 8ece8b835bc7dc7d1ca27821299e740e 292 Pfam PF01497 Periplasmic binding protein 35 247 9.5E-17 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain TMO_1858 8ece8b835bc7dc7d1ca27821299e740e 292 Gene3D G3DSA:3.40.50.1980 157 280 8.3E-11 T 14-10-2018 TMO_0939 c100e05ef1ccacf2ac6cc3241414b713 350 Pfam PF01212 Beta-eliminating lyase 3 295 1.3E-62 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 TMO_0939 c100e05ef1ccacf2ac6cc3241414b713 350 Gene3D G3DSA:3.90.1150.10 5 337 2.0E-125 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_0939 c100e05ef1ccacf2ac6cc3241414b713 350 Gene3D G3DSA:3.40.640.10 12 252 2.0E-125 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0939 c100e05ef1ccacf2ac6cc3241414b713 350 PIRSF PIRSF038940 1 347 4.5E-142 T 14-10-2018 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 TMO_0939 c100e05ef1ccacf2ac6cc3241414b713 350 SUPERFAMILY SSF53383 1 340 7.7E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_1613 4cfef67f7b093ee656a5b3203c384e0e 814 Pfam PF01804 Penicillin amidase 45 796 1.2E-229 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 TMO_1613 4cfef67f7b093ee656a5b3203c384e0e 814 SUPERFAMILY SSF56235 41 799 1.21E-225 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_1613 4cfef67f7b093ee656a5b3203c384e0e 814 PIRSF PIRSF001227 6 807 7.6E-192 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 TMO_1613 4cfef67f7b093ee656a5b3203c384e0e 814 Gene3D G3DSA:3.60.20.10 257 783 1.2E-175 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_1613 4cfef67f7b093ee656a5b3203c384e0e 814 Gene3D G3DSA:2.30.120.10 329 404 1.2E-175 T 14-10-2018 TMO_1613 4cfef67f7b093ee656a5b3203c384e0e 814 Gene3D G3DSA:1.10.439.10 16 179 4.0E-61 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 TMO_1613 4cfef67f7b093ee656a5b3203c384e0e 814 Gene3D G3DSA:1.10.1400.10 554 688 1.2E-175 T 14-10-2018 TMO_c0498 9a0cb13dc1fee48de23dc201460425b4 264 Gene3D G3DSA:1.10.3720.10 62 258 1.8E-20 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0498 9a0cb13dc1fee48de23dc201460425b4 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 257 6.3E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0498 9a0cb13dc1fee48de23dc201460425b4 264 SUPERFAMILY SSF161098 66 252 9.42E-29 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3561 4619952b1d9faa3a2701330b33375951 287 Gene3D G3DSA:3.20.190.10 1 146 3.0E-36 T 14-10-2018 IPR035937 MutM-like, N-terminal TMO_3561 4619952b1d9faa3a2701330b33375951 287 SUPERFAMILY SSF57716 233 286 1.57E-14 T 14-10-2018 TMO_3561 4619952b1d9faa3a2701330b33375951 287 SMART SM01232 145 237 1.1E-48 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 TMO_3561 4619952b1d9faa3a2701330b33375951 287 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 128 1.5E-34 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 TMO_3561 4619952b1d9faa3a2701330b33375951 287 Gene3D G3DSA:1.10.8.50 155 287 4.3E-46 T 14-10-2018 TMO_3561 4619952b1d9faa3a2701330b33375951 287 Pfam PF06827 Zinc finger found in FPG and IleRS 259 286 8.1E-10 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 TMO_3561 4619952b1d9faa3a2701330b33375951 287 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 286 1.0E-81 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 TMO_3561 4619952b1d9faa3a2701330b33375951 287 SMART SM00898 2 129 1.9E-45 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 TMO_3561 4619952b1d9faa3a2701330b33375951 287 SUPERFAMILY SSF46946 146 237 1.62E-29 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 TMO_3561 4619952b1d9faa3a2701330b33375951 287 SUPERFAMILY SSF81624 2 150 2.35E-37 T 14-10-2018 IPR035937 MutM-like, N-terminal TMO_3561 4619952b1d9faa3a2701330b33375951 287 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 287 43.433 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 TMO_3561 4619952b1d9faa3a2701330b33375951 287 ProSitePatterns PS01242 Zinc finger FPG-type signature. 260 286 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 TMO_3561 4619952b1d9faa3a2701330b33375951 287 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 145 234 6.2E-26 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Gene3D G3DSA:2.40.50.920 28 106 7.7E-10 T 14-10-2018 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 326 6.9E-45 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 106 599 3.6E-240 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Pfam PF06480 FtsH Extracellular 8 98 1.5E-12 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 SUPERFAMILY SSF140990 409 606 2.75E-76 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 SUPERFAMILY SSF52540 148 397 1.99E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 5 627 37.939 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Pfam PF01434 Peptidase family M41 388 598 5.1E-82 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Gene3D G3DSA:1.10.8.60 328 402 1.9E-29 T 14-10-2018 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Gene3D G3DSA:3.40.50.300 145 326 2.9E-70 T 14-10-2018 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Gene3D G3DSA:1.20.58.760 403 609 1.7E-77 T 14-10-2018 TMO_0911 df3cc12fba61c7d1bcd9aac50f2fd59f 647 SMART SM00382 190 329 1.4E-25 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1325 6bf7c3c09fdab98a74acab6a9f505173 351 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 181 1.9E-59 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_1325 6bf7c3c09fdab98a74acab6a9f505173 351 SUPERFAMILY SSF90002 256 348 1.09E-25 T 14-10-2018 TMO_1325 6bf7c3c09fdab98a74acab6a9f505173 351 Gene3D G3DSA:3.30.1220.10 237 349 2.0E-34 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily TMO_1325 6bf7c3c09fdab98a74acab6a9f505173 351 SMART SM00833 256 350 6.1E-17 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_1325 6bf7c3c09fdab98a74acab6a9f505173 351 Gene3D G3DSA:3.40.50.300 1 200 1.3E-75 T 14-10-2018 TMO_1325 6bf7c3c09fdab98a74acab6a9f505173 351 SUPERFAMILY SSF52540 2 204 1.19E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1325 6bf7c3c09fdab98a74acab6a9f505173 351 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 347 1.5E-22 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_a0457 c4539f0de8268756fa022a112c6f1ff2 91 SUPERFAMILY SSF47598 1 43 1.22E-7 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_a0457 c4539f0de8268756fa022a112c6f1ff2 91 Gene3D G3DSA:1.10.1220.10 2 43 7.7E-5 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TMO_a0457 c4539f0de8268756fa022a112c6f1ff2 91 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 41 6.1E-7 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 TMO_b0270 2960be9df5d8e1d8c36048f0f3201779 294 Gene3D G3DSA:1.10.10.60 185 288 1.3E-21 T 14-10-2018 TMO_b0270 2960be9df5d8e1d8c36048f0f3201779 294 SUPERFAMILY SSF51182 42 210 2.22E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_b0270 2960be9df5d8e1d8c36048f0f3201779 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 279 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_b0270 2960be9df5d8e1d8c36048f0f3201779 294 Pfam PF12833 Helix-turn-helix domain 207 284 5.8E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0270 2960be9df5d8e1d8c36048f0f3201779 294 SMART SM00342 201 283 3.8E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0270 2960be9df5d8e1d8c36048f0f3201779 294 Gene3D G3DSA:2.60.120.10 32 119 3.1E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_b0270 2960be9df5d8e1d8c36048f0f3201779 294 Pfam PF02311 AraC-like ligand binding domain 60 146 1.6E-6 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_b0270 2960be9df5d8e1d8c36048f0f3201779 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 283 1.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_b0270 2960be9df5d8e1d8c36048f0f3201779 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 267 1.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_b0270 2960be9df5d8e1d8c36048f0f3201779 294 SUPERFAMILY SSF46689 237 285 1.08E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1535 7ee144214d8a7fb16ac9e3d347d95e88 353 Gene3D G3DSA:3.40.50.300 9 232 3.6E-62 T 14-10-2018 TMO_1535 7ee144214d8a7fb16ac9e3d347d95e88 353 SUPERFAMILY SSF52540 11 251 1.66E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1535 7ee144214d8a7fb16ac9e3d347d95e88 353 SUPERFAMILY SSF50331 258 352 1.73E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_1535 7ee144214d8a7fb16ac9e3d347d95e88 353 Gene3D G3DSA:2.40.50.940 233 349 1.1E-5 T 14-10-2018 TMO_1535 7ee144214d8a7fb16ac9e3d347d95e88 353 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1535 7ee144214d8a7fb16ac9e3d347d95e88 353 Pfam PF00005 ABC transporter 27 170 3.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1535 7ee144214d8a7fb16ac9e3d347d95e88 353 SMART SM00382 35 220 9.0E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1535 7ee144214d8a7fb16ac9e3d347d95e88 353 Gene3D G3DSA:2.40.50.140 285 340 1.1E-5 T 14-10-2018 TMO_1634 cded179428ac2630478933c5220e3f0a 705 SUPERFAMILY SSF58104 371 684 5.36E-59 T 14-10-2018 TMO_1634 cded179428ac2630478933c5220e3f0a 705 SMART SM00304 593 646 29.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_1634 cded179428ac2630478933c5220e3f0a 705 SMART SM00304 343 396 0.051 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_1634 cded179428ac2630478933c5220e3f0a 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 510 661 1.4E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_1634 cded179428ac2630478933c5220e3f0a 705 Gene3D G3DSA:3.30.450.20 63 210 5.0E-46 T 14-10-2018 TMO_1634 cded179428ac2630478933c5220e3f0a 705 SMART SM00283 433 687 3.3E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_1634 cded179428ac2630478933c5220e3f0a 705 Pfam PF02743 Cache domain 54 257 1.2E-13 T 14-10-2018 IPR033479 Double Cache domain 1 TMO_1634 cded179428ac2630478933c5220e3f0a 705 Gene3D G3DSA:3.30.450.20 54 311 5.0E-46 T 14-10-2018 TMO_1634 cded179428ac2630478933c5220e3f0a 705 Gene3D G3DSA:1.10.8.500 344 395 1.9E-9 T 14-10-2018 TMO_1634 cded179428ac2630478933c5220e3f0a 705 Gene3D G3DSA:1.10.287.950 400 702 7.8E-55 T 14-10-2018 TMO_b0289 5bea7a78a73497c03c45ee0ab11100d1 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 419 6.4E-91 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_b0289 5bea7a78a73497c03c45ee0ab11100d1 429 PIRSF PIRSF006066 1 429 8.1E-98 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0289 5bea7a78a73497c03c45ee0ab11100d1 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 424 6.7E-99 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0349 d0178bd907740913b5c78f21cd27364a 257 SUPERFAMILY SSF55781 93 257 2.42E-38 T 14-10-2018 TMO_0349 d0178bd907740913b5c78f21cd27364a 257 Gene3D G3DSA:1.10.10.10 27 90 3.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0349 d0178bd907740913b5c78f21cd27364a 257 Pfam PF09339 IclR helix-turn-helix domain 30 81 1.1E-14 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_0349 d0178bd907740913b5c78f21cd27364a 257 Gene3D G3DSA:3.30.450.40 99 256 5.0E-40 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_0349 d0178bd907740913b5c78f21cd27364a 257 Pfam PF01614 Bacterial transcriptional regulator 179 254 2.3E-16 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_0349 d0178bd907740913b5c78f21cd27364a 257 SUPERFAMILY SSF46785 28 98 3.24E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0349 d0178bd907740913b5c78f21cd27364a 257 SMART SM00346 28 118 4.3E-19 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_2543 814a6b4ec981a7815d0ad9b94c6159b3 308 Gene3D G3DSA:1.20.1530.20 170 308 2.3E-10 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily TMO_2543 814a6b4ec981a7815d0ad9b94c6159b3 308 Pfam PF03547 Membrane transport protein 163 302 1.7E-10 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 TMO_b0348 0e48676de4d700f0611321844c9afec0 304 Gene3D G3DSA:3.20.20.60 22 304 1.1E-88 T 14-10-2018 TMO_b0348 0e48676de4d700f0611321844c9afec0 304 Pfam PF13714 Phosphoenolpyruvate phosphomutase 29 267 3.6E-66 T 14-10-2018 TMO_b0348 0e48676de4d700f0611321844c9afec0 304 SUPERFAMILY SSF51621 28 302 1.61E-73 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_b0074 51503fc127d19a8e04dc6fff8511c97e 441 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 437 7.2E-87 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0074 51503fc127d19a8e04dc6fff8511c97e 441 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 431 1.7E-81 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_b0074 51503fc127d19a8e04dc6fff8511c97e 441 PIRSF PIRSF006066 7 441 8.0E-67 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 Gene3D G3DSA:3.30.360.10 152 316 8.5E-153 T 14-10-2018 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.0E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 5.0E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.0E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.0E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 5.0E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 SMART SM00846 3 153 7.8E-91 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 9.9E-131 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 Gene3D G3DSA:3.40.50.720 4 326 8.5E-153 T 14-10-2018 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 9.6E-37 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 SUPERFAMILY SSF55347 153 315 2.14E-73 T 14-10-2018 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 SUPERFAMILY SSF51735 1 181 3.41E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 3.5E-68 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0884 9b7ba83bfee25f636d106569ae3b94e3 334 PIRSF PIRSF000149 1 334 1.0E-140 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_2854 971aaab8434e3b837239be2aa6949864 283 Gene3D G3DSA:1.10.10.10 14 97 4.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2854 971aaab8434e3b837239be2aa6949864 283 SMART SM00346 29 119 2.9E-21 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_2854 971aaab8434e3b837239be2aa6949864 283 Gene3D G3DSA:3.30.450.40 98 280 1.4E-38 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_2854 971aaab8434e3b837239be2aa6949864 283 Pfam PF01614 Bacterial transcriptional regulator 153 274 3.6E-22 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_2854 971aaab8434e3b837239be2aa6949864 283 SUPERFAMILY SSF46785 29 99 3.56E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2854 971aaab8434e3b837239be2aa6949864 283 Pfam PF09339 IclR helix-turn-helix domain 31 82 8.0E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_2854 971aaab8434e3b837239be2aa6949864 283 SUPERFAMILY SSF55781 87 276 2.03E-35 T 14-10-2018 TMO_1432 eab4d8e6eb39ce421f3fc064d3c5d251 158 Gene3D G3DSA:3.40.50.850 1 150 3.1E-11 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_1432 eab4d8e6eb39ce421f3fc064d3c5d251 158 SUPERFAMILY SSF52499 5 151 4.45E-16 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_1432 eab4d8e6eb39ce421f3fc064d3c5d251 158 Pfam PF00857 Isochorismatase family 7 151 4.1E-8 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_c0010 b080bb4744990fb22c3d5036610c7793 98 Pfam PF04214 Protein of unknown function, DUF 9 68 7.4E-31 T 14-10-2018 IPR007332 Protein of unknown function DUF411 TMO_0289 130744f35ca4b7c962e9fb2fdbdcf6c1 404 Gene3D G3DSA:2.40.50.140 329 376 1.4E-11 T 14-10-2018 TMO_0289 130744f35ca4b7c962e9fb2fdbdcf6c1 404 Pfam PF00005 ABC transporter 63 204 2.7E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0289 130744f35ca4b7c962e9fb2fdbdcf6c1 404 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0289 130744f35ca4b7c962e9fb2fdbdcf6c1 404 SUPERFAMILY SSF50331 283 401 1.11E-15 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_0289 130744f35ca4b7c962e9fb2fdbdcf6c1 404 SUPERFAMILY SSF52540 47 285 1.91E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0289 130744f35ca4b7c962e9fb2fdbdcf6c1 404 Pfam PF08402 TOBE domain 322 402 8.0E-18 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_0289 130744f35ca4b7c962e9fb2fdbdcf6c1 404 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 77 402 6.4E-135 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 TMO_0289 130744f35ca4b7c962e9fb2fdbdcf6c1 404 SMART SM00382 71 254 3.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0289 130744f35ca4b7c962e9fb2fdbdcf6c1 404 Gene3D G3DSA:2.40.50.940 265 328 1.4E-11 T 14-10-2018 TMO_0289 130744f35ca4b7c962e9fb2fdbdcf6c1 404 Gene3D G3DSA:3.40.50.300 47 264 2.6E-65 T 14-10-2018 TMO_2547 b30b565f6694001942f25a90fd6f5de3 447 Pfam PF01979 Amidohydrolase family 73 443 2.3E-30 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_2547 b30b565f6694001942f25a90fd6f5de3 447 ProSitePatterns PS00482 Dihydroorotase signature 1. 79 87 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_2547 b30b565f6694001942f25a90fd6f5de3 447 Gene3D G3DSA:2.30.40.10 26 443 1.2E-142 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2547 b30b565f6694001942f25a90fd6f5de3 447 ProSitePatterns PS00483 Dihydroorotase signature 2. 326 337 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_2547 b30b565f6694001942f25a90fd6f5de3 447 SUPERFAMILY SSF51556 76 388 2.44E-109 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_2547 b30b565f6694001942f25a90fd6f5de3 447 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 40 444 5.8E-123 T 14-10-2018 TMO_2547 b30b565f6694001942f25a90fd6f5de3 447 Gene3D G3DSA:3.20.20.140 77 390 1.2E-142 T 14-10-2018 TMO_2547 b30b565f6694001942f25a90fd6f5de3 447 SUPERFAMILY SSF51338 23 445 1.23E-24 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2547 b30b565f6694001942f25a90fd6f5de3 447 Hamap MF_00220_B Dihydroorotase [pyrC]. 20 446 43.858 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_2290 cb9d1087f9b2903ba42a79383e71e0a8 313 Gene3D G3DSA:3.40.50.1980 172 295 1.3E-20 T 14-10-2018 TMO_2290 cb9d1087f9b2903ba42a79383e71e0a8 313 SUPERFAMILY SSF53807 25 297 2.35E-55 T 14-10-2018 TMO_2290 cb9d1087f9b2903ba42a79383e71e0a8 313 Gene3D G3DSA:3.40.50.1980 27 171 1.1E-29 T 14-10-2018 TMO_2290 cb9d1087f9b2903ba42a79383e71e0a8 313 Pfam PF01497 Periplasmic binding protein 47 268 1.1E-29 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain TMO_0456 f4d536b97a536a696fecbd10a479e540 317 Gene3D G3DSA:3.40.190.10 103 286 6.0E-39 T 14-10-2018 TMO_0456 f4d536b97a536a696fecbd10a479e540 317 Gene3D G3DSA:1.10.10.10 9 92 9.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0456 f4d536b97a536a696fecbd10a479e540 317 Pfam PF03466 LysR substrate binding domain 92 289 9.4E-23 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0456 f4d536b97a536a696fecbd10a479e540 317 SUPERFAMILY SSF53850 93 291 5.61E-24 T 14-10-2018 TMO_0456 f4d536b97a536a696fecbd10a479e540 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0456 f4d536b97a536a696fecbd10a479e540 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0456 f4d536b97a536a696fecbd10a479e540 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0456 f4d536b97a536a696fecbd10a479e540 317 Gene3D G3DSA:3.40.190.10 162 259 6.0E-39 T 14-10-2018 TMO_0456 f4d536b97a536a696fecbd10a479e540 317 SUPERFAMILY SSF46785 5 83 3.91E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0456 f4d536b97a536a696fecbd10a479e540 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 2.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1191 44335252351a7e645f708fbd7026ee41 525 Gene3D G3DSA:3.40.50.300 281 517 6.4E-39 T 14-10-2018 TMO_1191 44335252351a7e645f708fbd7026ee41 525 SUPERFAMILY SSF52540 31 252 3.19E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1191 44335252351a7e645f708fbd7026ee41 525 SUPERFAMILY SSF52540 283 507 3.15E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1191 44335252351a7e645f708fbd7026ee41 525 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1191 44335252351a7e645f708fbd7026ee41 525 Gene3D G3DSA:3.40.50.300 30 280 1.6E-51 T 14-10-2018 TMO_1191 44335252351a7e645f708fbd7026ee41 525 SMART SM00382 308 510 14.0 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1191 44335252351a7e645f708fbd7026ee41 525 SMART SM00382 54 242 5.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1191 44335252351a7e645f708fbd7026ee41 525 Pfam PF00005 ABC transporter 45 193 1.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1191 44335252351a7e645f708fbd7026ee41 525 Pfam PF00005 ABC transporter 299 450 1.4E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0417 eae24899f3ed376df627ab163afd495f 104 Pfam PF12840 Helix-turn-helix domain 5 63 5.6E-16 T 14-10-2018 TMO_b0417 eae24899f3ed376df627ab163afd495f 104 SMART SM00418 5 86 2.2E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_b0417 eae24899f3ed376df627ab163afd495f 104 SUPERFAMILY SSF46785 4 96 1.96E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0417 eae24899f3ed376df627ab163afd495f 104 Gene3D G3DSA:1.10.10.10 2 104 3.1E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0417 eae24899f3ed376df627ab163afd495f 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 3.2E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_b0417 eae24899f3ed376df627ab163afd495f 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 3.2E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_b0417 eae24899f3ed376df627ab163afd495f 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 3.2E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 467 2.6E-68 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 Gene3D G3DSA:3.50.50.60 147 472 2.6E-113 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 Pfam PF00364 Biotin-requiring enzyme 5 77 4.4E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 Gene3D G3DSA:2.40.50.100 2 103 2.0E-33 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 Gene3D G3DSA:3.50.50.60 292 414 2.6E-113 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 181 191 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 SUPERFAMILY SSF51230 1 97 7.59E-30 T 14-10-2018 IPR011053 Single hybrid motif TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 Gene3D G3DSA:3.30.390.30 487 607 9.6E-43 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 SUPERFAMILY SSF51905 144 476 2.29E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 277 295 2.5E-36 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 432 454 2.5E-36 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 404 420 2.5E-36 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 168 2.5E-36 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 2.5E-36 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 SUPERFAMILY SSF55424 486 606 7.9E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 170 7.1E-65 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 419 7.1E-65 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 447 454 7.1E-65 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 484 505 7.1E-65 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 341 7.1E-65 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 280 289 7.1E-65 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 549 564 7.1E-65 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 571 591 7.1E-65 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 195 7.1E-65 T 14-10-2018 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 147 607 2.3E-170 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 488 596 2.5E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 PIRSF PIRSF000350 36 605 2.5E-81 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TMO_1714 a6af2f8a5981256a9587d1adb79785bb 607 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 503 519 1.0E-64 T 14-10-2018 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 521 538 1.0E-64 T 14-10-2018 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 766 782 1.0E-64 T 14-10-2018 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 436 450 1.0E-64 T 14-10-2018 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 84 97 1.0E-64 T 14-10-2018 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 127 141 1.0E-64 T 14-10-2018 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 49 64 1.0E-64 T 14-10-2018 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 284 297 1.0E-64 T 14-10-2018 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 ProSitePatterns PS00177 DNA topoisomerase II signature. 438 446 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 SUPERFAMILY SSF55874 19 226 3.41E-68 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 Pfam PF00204 DNA gyrase B 237 406 3.0E-60 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 SMART SM00433 49 827 5.5E-263 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 Gene3D G3DSA:3.40.50.670 728 832 1.1E-25 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 Gene3D G3DSA:3.40.50.670 414 585 2.9E-72 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 46 164 4.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 486 495 1.5E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 195 210 1.5E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 787 799 1.5E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 328 344 1.5E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 376 390 1.5E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 803 819 1.5E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 236 258 1.5E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 390 410 1.5E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 19 29 1.5E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 210 223 1.5E-68 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 Gene3D G3DSA:3.30.565.10 16 236 1.5E-86 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 SUPERFAMILY SSF54211 237 407 5.88E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 SMART SM00387 45 190 1.3E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 762 823 4.2E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 Gene3D G3DSA:3.30.230.10 237 408 6.0E-72 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 SUPERFAMILY SSF56719 410 826 1.1E-85 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 Pfam PF01751 Toprim domain 435 545 4.3E-18 T 14-10-2018 IPR006171 TOPRIM domain TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 19 834 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_0004 d8d31baba496380efa39af4d9dfbf48a 834 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 16 834 101.551 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_a0504 bcdb913379c359cf25a42d2e3e4c7c5b 182 SUPERFAMILY SSF46785 27 170 2.47E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0504 bcdb913379c359cf25a42d2e3e4c7c5b 182 SMART SM00347 47 152 9.0E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_a0504 bcdb913379c359cf25a42d2e3e4c7c5b 182 ProSitePatterns PS01117 MarR-type HTH domain signature. 91 125 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_a0504 bcdb913379c359cf25a42d2e3e4c7c5b 182 Gene3D G3DSA:1.10.10.10 25 172 4.7E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0504 bcdb913379c359cf25a42d2e3e4c7c5b 182 Pfam PF13463 Winged helix DNA-binding domain 54 125 3.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_a0504 bcdb913379c359cf25a42d2e3e4c7c5b 182 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 128 3.4E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_a0504 bcdb913379c359cf25a42d2e3e4c7c5b 182 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 108 3.4E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_a0504 bcdb913379c359cf25a42d2e3e4c7c5b 182 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 92 3.4E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_a0504 bcdb913379c359cf25a42d2e3e4c7c5b 182 PRINTS PR00598 Bacterial regulatory protein MarR family signature 142 162 3.4E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0275 55f458fc4059e32a5dc3ebfb1761d835 342 PRINTS PR01270 Histone deacetylase superfamily signature 154 177 1.8E-11 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0275 55f458fc4059e32a5dc3ebfb1761d835 342 PRINTS PR01270 Histone deacetylase superfamily signature 272 282 1.8E-11 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0275 55f458fc4059e32a5dc3ebfb1761d835 342 PRINTS PR01270 Histone deacetylase superfamily signature 186 201 1.8E-11 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0275 55f458fc4059e32a5dc3ebfb1761d835 342 Pfam PF00850 Histone deacetylase domain 26 333 1.6E-59 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0275 55f458fc4059e32a5dc3ebfb1761d835 342 Gene3D G3DSA:3.40.800.20 1 341 8.8E-108 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0275 55f458fc4059e32a5dc3ebfb1761d835 342 SUPERFAMILY SSF52768 1 336 9.11E-82 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily TMO_1412 9eb212dc70e2bfdc7eb580fddd36a36e 470 Gene3D G3DSA:3.90.1300.10 4 466 1.3E-146 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1412 9eb212dc70e2bfdc7eb580fddd36a36e 470 Pfam PF01425 Amidase 28 449 8.6E-103 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1412 9eb212dc70e2bfdc7eb580fddd36a36e 470 SUPERFAMILY SSF75304 5 458 1.27E-133 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_2087 978cf1114695594e2bea971d3aecbe7d 162 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 36 147 2.7E-15 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_2087 978cf1114695594e2bea971d3aecbe7d 162 Gene3D G3DSA:3.10.129.10 22 151 2.1E-35 T 14-10-2018 TMO_2087 978cf1114695594e2bea971d3aecbe7d 162 SUPERFAMILY SSF54637 31 150 8.34E-29 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_2087 978cf1114695594e2bea971d3aecbe7d 162 Pfam PF03061 Thioesterase superfamily 63 140 3.1E-11 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_c0937 38cd21fcfb6e1ed94d70d2143790a33b 807 Gene3D G3DSA:2.40.170.20 318 807 3.5E-83 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_c0937 38cd21fcfb6e1ed94d70d2143790a33b 807 Pfam PF07715 TonB-dependent Receptor Plug Domain 186 293 7.5E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_c0937 38cd21fcfb6e1ed94d70d2143790a33b 807 Gene3D G3DSA:2.170.130.10 175 298 1.7E-16 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_c0937 38cd21fcfb6e1ed94d70d2143790a33b 807 Pfam PF00593 TonB dependent receptor 409 806 5.4E-44 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_c0937 38cd21fcfb6e1ed94d70d2143790a33b 807 SUPERFAMILY SSF56935 149 807 1.5E-104 T 14-10-2018 TMO_b0494 6417346b39cdf3f272b1522e53fc8875 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 2.1E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_b0494 6417346b39cdf3f272b1522e53fc8875 338 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0494 6417346b39cdf3f272b1522e53fc8875 338 Gene3D G3DSA:3.40.50.300 18 336 1.8E-97 T 14-10-2018 TMO_b0494 6417346b39cdf3f272b1522e53fc8875 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 331 3.7E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_b0494 6417346b39cdf3f272b1522e53fc8875 338 SUPERFAMILY SSF52540 20 264 2.72E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0494 6417346b39cdf3f272b1522e53fc8875 338 SMART SM00382 50 242 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0494 6417346b39cdf3f272b1522e53fc8875 338 Pfam PF00005 ABC transporter 42 191 2.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0595 17232a3a3822ef2648e2416260c72c6b 261 Gene3D G3DSA:3.40.50.1820 5 254 1.1E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0595 17232a3a3822ef2648e2416260c72c6b 261 SUPERFAMILY SSF53474 17 254 1.51E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0595 17232a3a3822ef2648e2416260c72c6b 261 Pfam PF00975 Thioesterase domain 29 245 4.9E-38 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 TMO_b0568 69bb362e4a694284615f3fdd2c6cc0d4 469 Gene3D G3DSA:1.10.4100.10 33 429 2.3E-87 T 14-10-2018 TMO_b0568 69bb362e4a694284615f3fdd2c6cc0d4 469 SUPERFAMILY SSF103378 12 459 1.44E-83 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 TMO_b0568 69bb362e4a694284615f3fdd2c6cc0d4 469 Gene3D G3DSA:3.30.1330.120 280 411 2.3E-87 T 14-10-2018 TMO_b0568 69bb362e4a694284615f3fdd2c6cc0d4 469 Pfam PF03972 MmgE/PrpD family 15 450 9.6E-97 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 TMO_c0631 7e9e0aef941ccfa8acc0ac6d44db5145 250 Gene3D G3DSA:3.20.20.70 1 249 9.4E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_c0631 7e9e0aef941ccfa8acc0ac6d44db5145 250 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 4 246 3.7E-76 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 TMO_c0631 7e9e0aef941ccfa8acc0ac6d44db5145 250 SUPERFAMILY SSF63892 2 247 6.15E-74 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 TMO_c0631 7e9e0aef941ccfa8acc0ac6d44db5145 250 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 250 74.953 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 TMO_c0631 7e9e0aef941ccfa8acc0ac6d44db5145 250 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 246 2.4E-59 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 TMO_c0124 4d2de7764ce15442fb4f36b9d0ec534c 400 Pfam PF00155 Aminotransferase class I and II 32 392 7.6E-74 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_c0124 4d2de7764ce15442fb4f36b9d0ec534c 400 Gene3D G3DSA:3.40.640.10 63 286 3.2E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0124 4d2de7764ce15442fb4f36b9d0ec534c 400 SUPERFAMILY SSF53383 1 398 1.33E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0124 4d2de7764ce15442fb4f36b9d0ec534c 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TMO_c0124 4d2de7764ce15442fb4f36b9d0ec534c 400 Gene3D G3DSA:3.90.1150.10 26 392 3.2E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_2150 841c8002edbd329a8958296147fd8442 840 Gene3D G3DSA:3.40.228.10 139 336 4.0E-154 T 14-10-2018 TMO_2150 841c8002edbd329a8958296147fd8442 840 Gene3D G3DSA:2.20.25.90 8 61 2.1E-13 T 14-10-2018 TMO_2150 841c8002edbd329a8958296147fd8442 840 SUPERFAMILY SSF53706 9 551 1.31E-159 T 14-10-2018 TMO_2150 841c8002edbd329a8958296147fd8442 840 Gene3D G3DSA:2.40.40.20 566 691 3.3E-33 T 14-10-2018 TMO_2150 841c8002edbd329a8958296147fd8442 840 SUPERFAMILY SSF50692 565 702 2.71E-36 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TMO_2150 841c8002edbd329a8958296147fd8442 840 Pfam PF00384 Molybdopterin oxidoreductase 80 482 2.9E-62 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2150 841c8002edbd329a8958296147fd8442 840 SMART SM00926 7 62 2.0E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2150 841c8002edbd329a8958296147fd8442 840 Pfam PF01568 Molydopterin dinucleotide binding domain 575 684 1.7E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TMO_2150 841c8002edbd329a8958296147fd8442 840 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 10 60 1.6E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2150 841c8002edbd329a8958296147fd8442 840 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 12 30 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 TMO_2150 841c8002edbd329a8958296147fd8442 840 Gene3D G3DSA:3.40.50.740 74 540 4.0E-154 T 14-10-2018 TMO_0024 a0b6a74d833580589419ef8731a19049 196 Pfam PF00072 Response regulator receiver domain 28 136 1.3E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0024 a0b6a74d833580589419ef8731a19049 196 Gene3D G3DSA:1.10.10.60 139 196 4.2E-24 T 14-10-2018 TMO_0024 a0b6a74d833580589419ef8731a19049 196 SMART SM00448 25 136 9.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0024 a0b6a74d833580589419ef8731a19049 196 SUPERFAMILY SSF52172 27 182 6.12E-33 T 14-10-2018 IPR011006 CheY-like superfamily TMO_0024 a0b6a74d833580589419ef8731a19049 196 Gene3D G3DSA:3.40.50.2300 25 138 8.6E-28 T 14-10-2018 TMO_0024 a0b6a74d833580589419ef8731a19049 196 Pfam PF02954 Bacterial regulatory protein, Fis family 159 188 4.4E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_3248 887423c5e51aab8fcd9996ae4021b03e 121 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 23.601 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3248 887423c5e51aab8fcd9996ae4021b03e 121 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_3248 887423c5e51aab8fcd9996ae4021b03e 121 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 83 5.1E-33 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3248 887423c5e51aab8fcd9996ae4021b03e 121 SUPERFAMILY SSF54565 3 91 3.4E-32 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3248 887423c5e51aab8fcd9996ae4021b03e 121 Pfam PF00886 Ribosomal protein S16 9 70 2.9E-26 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3248 887423c5e51aab8fcd9996ae4021b03e 121 Gene3D G3DSA:3.30.1320.10 1 121 1.5E-39 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_c0131 07af28a2c3a2be5779b2bcae56a8c9d1 183 PIRSF PIRSF000847 1 182 8.1E-48 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TMO_c0131 07af28a2c3a2be5779b2bcae56a8c9d1 183 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_c0131 07af28a2c3a2be5779b2bcae56a8c9d1 183 Gene3D G3DSA:1.20.120.1760 1 171 1.2E-12 T 14-10-2018 TMO_c0131 07af28a2c3a2be5779b2bcae56a8c9d1 183 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 175 9.9E-50 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TMO_c0131 07af28a2c3a2be5779b2bcae56a8c9d1 183 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 8.7E-15 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_b0189 3de51bd89cd9d77e1c6df9ab098efd78 538 Pfam PF02743 Cache domain 64 279 2.5E-20 T 14-10-2018 IPR033479 Double Cache domain 1 TMO_b0189 3de51bd89cd9d77e1c6df9ab098efd78 538 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 530 5.3E-47 T 14-10-2018 IPR000160 GGDEF domain TMO_b0189 3de51bd89cd9d77e1c6df9ab098efd78 538 SUPERFAMILY SSF103190 198 278 1.49E-14 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TMO_b0189 3de51bd89cd9d77e1c6df9ab098efd78 538 SMART SM00267 366 531 1.0E-61 T 14-10-2018 IPR000160 GGDEF domain TMO_b0189 3de51bd89cd9d77e1c6df9ab098efd78 538 Gene3D G3DSA:3.30.450.20 163 298 7.3E-11 T 14-10-2018 TMO_b0189 3de51bd89cd9d77e1c6df9ab098efd78 538 Gene3D G3DSA:3.30.70.270 371 533 1.7E-54 T 14-10-2018 TMO_b0189 3de51bd89cd9d77e1c6df9ab098efd78 538 SUPERFAMILY SSF55073 382 530 1.73E-45 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_b0189 3de51bd89cd9d77e1c6df9ab098efd78 538 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 527 3.1E-42 T 14-10-2018 IPR000160 GGDEF domain TMO_b0189 3de51bd89cd9d77e1c6df9ab098efd78 538 SUPERFAMILY SSF103190 77 192 1.26E-6 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TMO_0702 82042cf757756777ebed46f87d0539da 352 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 312 2.2E-29 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_0702 82042cf757756777ebed46f87d0539da 352 Gene3D G3DSA:3.40.190.170 23 347 2.5E-65 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_b0087 0f0b520f11c0b1c6e52131b3b04cfb54 320 SMART SM01130 5 302 1.5E-47 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_b0087 0f0b520f11c0b1c6e52131b3b04cfb54 320 SUPERFAMILY SSF51569 5 272 1.05E-52 T 14-10-2018 TMO_b0087 0f0b520f11c0b1c6e52131b3b04cfb54 320 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 1.0E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_b0087 0f0b520f11c0b1c6e52131b3b04cfb54 320 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.0E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_b0087 0f0b520f11c0b1c6e52131b3b04cfb54 320 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.0E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_b0087 0f0b520f11c0b1c6e52131b3b04cfb54 320 Gene3D G3DSA:3.20.20.70 1 320 7.9E-127 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_b0087 0f0b520f11c0b1c6e52131b3b04cfb54 320 Pfam PF00701 Dihydrodipicolinate synthetase family 6 235 7.3E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_b0087 0f0b520f11c0b1c6e52131b3b04cfb54 320 PIRSF PIRSF001365 1 312 3.7E-65 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_c0928 9bb40be7d0e9a6d4b99f9e8f30a5d82c 231 Gene3D G3DSA:3.40.50.300 2 229 1.2E-52 T 14-10-2018 TMO_c0928 9bb40be7d0e9a6d4b99f9e8f30a5d82c 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0928 9bb40be7d0e9a6d4b99f9e8f30a5d82c 231 Pfam PF00005 ABC transporter 22 159 1.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0928 9bb40be7d0e9a6d4b99f9e8f30a5d82c 231 SMART SM00382 29 208 1.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0928 9bb40be7d0e9a6d4b99f9e8f30a5d82c 231 SUPERFAMILY SSF52540 4 220 8.2E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0351 bd838c7b6772172a4cb16841945580ae 451 Pfam PF00202 Aminotransferase class-III 19 441 3.1E-85 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_c0351 bd838c7b6772172a4cb16841945580ae 451 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 280 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_c0351 bd838c7b6772172a4cb16841945580ae 451 Gene3D G3DSA:3.40.640.10 53 332 1.8E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0351 bd838c7b6772172a4cb16841945580ae 451 Gene3D G3DSA:3.90.1150.10 23 441 1.8E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0351 bd838c7b6772172a4cb16841945580ae 451 SUPERFAMILY SSF53383 19 442 4.93E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_3249 1666927b2872d935a79ff97492872524 193 SUPERFAMILY SSF50447 27 112 6.71E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_3249 1666927b2872d935a79ff97492872524 193 Pfam PF05239 PRC-barrel domain 122 192 2.6E-9 T 14-10-2018 IPR027275 PRC-barrel domain TMO_3249 1666927b2872d935a79ff97492872524 193 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 28 192 23.733 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TMO_3249 1666927b2872d935a79ff97492872524 193 Gene3D G3DSA:2.30.30.240 116 193 1.8E-13 T 14-10-2018 TMO_3249 1666927b2872d935a79ff97492872524 193 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 29 192 2.5E-38 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TMO_3249 1666927b2872d935a79ff97492872524 193 SUPERFAMILY SSF50346 121 192 2.46E-18 T 14-10-2018 IPR011033 PRC-barrel-like superfamily TMO_3249 1666927b2872d935a79ff97492872524 193 Pfam PF01782 RimM N-terminal domain 31 110 6.7E-20 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 TMO_3249 1666927b2872d935a79ff97492872524 193 Gene3D G3DSA:2.40.30.60 27 112 3.0E-19 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 TMO_2306 31768f107351e6a45dc98473a813a04a 418 SUPERFAMILY SSF63433 6 117 9.81E-31 T 14-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 TMO_2306 31768f107351e6a45dc98473a813a04a 418 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 123 410 2.9E-54 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 TMO_2306 31768f107351e6a45dc98473a813a04a 418 SUPERFAMILY SSF56529 120 412 8.37E-87 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_2306 31768f107351e6a45dc98473a813a04a 418 Gene3D G3DSA:3.90.850.10 115 415 3.4E-114 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_2306 31768f107351e6a45dc98473a813a04a 418 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 7 414 1.7E-140 T 14-10-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 TMO_2306 31768f107351e6a45dc98473a813a04a 418 Gene3D G3DSA:2.30.30.230 1 114 1.0E-28 T 14-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 TMO_2306 31768f107351e6a45dc98473a813a04a 418 Pfam PF09298 Fumarylacetoacetase N-terminal 22 117 2.0E-22 T 14-10-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 TMO_b0502 631c3371f9626be80198b55d3373d91b 291 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 44 225 1.6E-30 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase TMO_b0502 631c3371f9626be80198b55d3373d91b 291 SUPERFAMILY SSF51197 36 279 2.38E-58 T 14-10-2018 TMO_b0502 631c3371f9626be80198b55d3373d91b 291 Gene3D G3DSA:2.60.120.620 21 284 3.4E-72 T 14-10-2018 TMO_1000 78e600a6755411e8172815a904d0d021 429 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 425 44.927 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_1000 78e600a6755411e8172815a904d0d021 429 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 424 3.7E-171 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_1000 78e600a6755411e8172815a904d0d021 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 415 2.3E-100 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 TMO_1000 78e600a6755411e8172815a904d0d021 429 Gene3D G3DSA:3.65.10.10 6 422 5.5E-162 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TMO_1000 78e600a6755411e8172815a904d0d021 429 Gene3D G3DSA:3.65.10.10 21 237 5.5E-162 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TMO_1000 78e600a6755411e8172815a904d0d021 429 SUPERFAMILY SSF55205 1 425 3.27E-135 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TMO_a0552 2fb3c0ecfaaaf14a856d2ed5c142198f 104 Pfam PF00355 Rieske [2Fe-2S] domain 3 89 7.2E-15 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_a0552 2fb3c0ecfaaaf14a856d2ed5c142198f 104 SUPERFAMILY SSF50022 1 102 2.23E-29 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_a0552 2fb3c0ecfaaaf14a856d2ed5c142198f 104 Gene3D G3DSA:2.102.10.10 1 103 6.3E-31 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_2588 5d816e0f5849fee61da86e2cdbd57559 751 SMART SM00965 67 117 1.2E-7 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_2588 5d816e0f5849fee61da86e2cdbd57559 751 SUPERFAMILY SSF56935 151 751 1.05E-65 T 14-10-2018 TMO_2588 5d816e0f5849fee61da86e2cdbd57559 751 Pfam PF07715 TonB-dependent Receptor Plug Domain 151 247 1.2E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_2588 5d816e0f5849fee61da86e2cdbd57559 751 Gene3D G3DSA:2.40.170.20 253 751 4.2E-70 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_2588 5d816e0f5849fee61da86e2cdbd57559 751 Pfam PF00593 TonB dependent receptor 382 748 2.3E-23 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_2588 5d816e0f5849fee61da86e2cdbd57559 751 Gene3D G3DSA:2.170.130.10 143 252 1.0E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_2588 5d816e0f5849fee61da86e2cdbd57559 751 Gene3D G3DSA:3.55.50.30 35 140 6.2E-25 T 14-10-2018 TMO_c0285 92d0d7f381b8c40aad2dce899eae3947 388 Gene3D G3DSA:1.20.1250.20 1 380 4.1E-39 T 14-10-2018 TMO_c0285 92d0d7f381b8c40aad2dce899eae3947 388 SUPERFAMILY SSF103473 2 384 1.7E-49 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0285 92d0d7f381b8c40aad2dce899eae3947 388 Pfam PF07690 Major Facilitator Superfamily 214 378 9.2E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0285 92d0d7f381b8c40aad2dce899eae3947 388 Pfam PF07690 Major Facilitator Superfamily 12 173 3.0E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0977 d3c08262a7558b71717384c6b498947e 128 Gene3D G3DSA:3.10.129.10 2 126 3.0E-36 T 14-10-2018 TMO_0977 d3c08262a7558b71717384c6b498947e 128 SUPERFAMILY SSF54637 3 127 9.74E-28 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0977 d3c08262a7558b71717384c6b498947e 128 Pfam PF01575 MaoC like domain 14 112 1.6E-23 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 Hamap MF_02004 Valine--tRNA ligase [valS]. 2 884 15.749 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 8.0E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 PRINTS PR00986 Valyl-tRNA synthetase signature 349 362 8.0E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 PRINTS PR00986 Valyl-tRNA synthetase signature 451 472 8.0E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 8.0E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 PRINTS PR00986 Valyl-tRNA synthetase signature 482 500 8.0E-37 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 865 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 Gene3D G3DSA:3.90.740.10 175 345 7.5E-297 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 SUPERFAMILY SSF46589 819 882 1.41E-13 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 819 882 2.0E-16 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 SUPERFAMILY SSF50677 191 345 2.62E-60 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 Gene3D G3DSA:1.10.287.380 812 884 4.1E-17 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 SUPERFAMILY SSF52374 4 580 1.21E-134 T 14-10-2018 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 Pfam PF08264 Anticodon-binding domain of tRNA 612 761 5.3E-38 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 569 1.6E-208 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 Gene3D G3DSA:3.40.50.620 22 531 7.5E-297 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 Gene3D G3DSA:1.10.730.10 2 748 7.5E-297 T 14-10-2018 TMO_1908 a07bdc6fa72a80654d2323abbc818795 889 SUPERFAMILY SSF47323 583 834 9.16E-56 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_c0819 fa6298f489e104f203531a289157482c 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 81 1.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0819 fa6298f489e104f203531a289157482c 463 SMART SM00345 22 81 2.8E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0819 fa6298f489e104f203531a289157482c 463 Pfam PF00155 Aminotransferase class I and II 92 444 2.4E-30 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_c0819 fa6298f489e104f203531a289157482c 463 Gene3D G3DSA:3.40.640.10 96 444 1.6E-66 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0819 fa6298f489e104f203531a289157482c 463 SUPERFAMILY SSF53383 83 452 5.9E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0819 fa6298f489e104f203531a289157482c 463 SUPERFAMILY SSF46785 16 85 2.21E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0819 fa6298f489e104f203531a289157482c 463 Gene3D G3DSA:1.10.10.10 13 82 1.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0631 a923bd89acef41d8c9dd4f9e13009496 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 121 2.0E-22 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_0631 a923bd89acef41d8c9dd4f9e13009496 398 Gene3D G3DSA:2.40.110.10 125 234 3.0E-40 T 14-10-2018 TMO_0631 a923bd89acef41d8c9dd4f9e13009496 398 SUPERFAMILY SSF47203 231 398 7.03E-21 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_0631 a923bd89acef41d8c9dd4f9e13009496 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 395 6.2E-20 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_0631 a923bd89acef41d8c9dd4f9e13009496 398 Gene3D G3DSA:1.10.540.10 2 119 3.6E-27 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_0631 a923bd89acef41d8c9dd4f9e13009496 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 1.9E-20 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_0631 a923bd89acef41d8c9dd4f9e13009496 398 SUPERFAMILY SSF56645 3 244 7.2E-77 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_0631 a923bd89acef41d8c9dd4f9e13009496 398 Gene3D G3DSA:1.20.140.10 235 398 1.1E-38 T 14-10-2018 TMO_2430 10eaff89413f1ce706b7d005b6b5b448 545 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 543 4.8E-111 T 14-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 TMO_2430 10eaff89413f1ce706b7d005b6b5b448 545 Pfam PF00999 Sodium/hydrogen exchanger family 7 419 5.0E-58 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TMO_2430 10eaff89413f1ce706b7d005b6b5b448 545 PRINTS PR01084 Na+/H+ exchanger signature 119 129 7.9E-6 T 14-10-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 TMO_2430 10eaff89413f1ce706b7d005b6b5b448 545 PRINTS PR01084 Na+/H+ exchanger signature 69 83 7.9E-6 T 14-10-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 TMO_2430 10eaff89413f1ce706b7d005b6b5b448 545 PRINTS PR01084 Na+/H+ exchanger signature 55 66 7.9E-6 T 14-10-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 TMO_2015 9d051ef1c9684ed1845916420f1599d6 564 Gene3D G3DSA:3.40.50.1220 196 351 3.1E-19 T 14-10-2018 TMO_2015 9d051ef1c9684ed1845916420f1599d6 564 Gene3D G3DSA:3.40.50.970 372 561 1.9E-36 T 14-10-2018 TMO_2015 9d051ef1c9684ed1845916420f1599d6 564 SUPERFAMILY SSF52467 215 346 6.87E-17 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_2015 9d051ef1c9684ed1845916420f1599d6 564 SUPERFAMILY SSF52518 16 197 2.5E-47 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_2015 9d051ef1c9684ed1845916420f1599d6 564 Gene3D G3DSA:3.40.50.970 21 188 3.5E-53 T 14-10-2018 TMO_2015 9d051ef1c9684ed1845916420f1599d6 564 SUPERFAMILY SSF52518 376 558 1.53E-32 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_2015 9d051ef1c9684ed1845916420f1599d6 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 429 556 2.9E-22 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_2015 9d051ef1c9684ed1845916420f1599d6 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 22 190 1.2E-45 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TMO_0428 767479535e60336413f393cc016ea665 299 SMART SM00729 26 238 1.6E-40 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_0428 767479535e60336413f393cc016ea665 299 Pfam PF04055 Radical SAM superfamily 33 188 2.1E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_0428 767479535e60336413f393cc016ea665 299 Gene3D G3DSA:3.20.20.70 1 297 1.1E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_0428 767479535e60336413f393cc016ea665 299 PIRSF PIRSF001619 1 299 4.9E-125 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TMO_0428 767479535e60336413f393cc016ea665 299 Hamap MF_01694 Biotin synthase [bioB]. 1 296 40.423 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TMO_0428 767479535e60336413f393cc016ea665 299 TIGRFAM TIGR00433 bioB: biotin synthase 3 293 9.3E-119 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TMO_0428 767479535e60336413f393cc016ea665 299 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 203 293 4.6E-16 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TMO_0428 767479535e60336413f393cc016ea665 299 SMART SM00876 203 295 2.5E-40 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TMO_0428 767479535e60336413f393cc016ea665 299 SUPERFAMILY SSF102114 3 294 1.44E-87 T 14-10-2018 TMO_3323 57ab6ff27291f6ee12117a9f925d585d 509 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 91 1.4E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3323 57ab6ff27291f6ee12117a9f925d585d 509 Gene3D G3DSA:3.40.640.10 134 495 1.7E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_3323 57ab6ff27291f6ee12117a9f925d585d 509 SUPERFAMILY SSF53383 136 502 8.45E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_3323 57ab6ff27291f6ee12117a9f925d585d 509 Gene3D G3DSA:1.10.10.10 26 124 1.6E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3323 57ab6ff27291f6ee12117a9f925d585d 509 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 65 3.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3323 57ab6ff27291f6ee12117a9f925d585d 509 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 65 81 3.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3323 57ab6ff27291f6ee12117a9f925d585d 509 SMART SM00345 32 91 8.3E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3323 57ab6ff27291f6ee12117a9f925d585d 509 Pfam PF00155 Aminotransferase class I and II 158 425 2.2E-21 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_3323 57ab6ff27291f6ee12117a9f925d585d 509 SUPERFAMILY SSF46785 24 101 4.32E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2422 7ea53af1ab8da168ba51aa77758a4947 300 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 117 137 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_2422 7ea53af1ab8da168ba51aa77758a4947 300 SUPERFAMILY SSF52096 10 254 1.36E-59 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_2422 7ea53af1ab8da168ba51aa77758a4947 300 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 252 1.6E-37 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_2422 7ea53af1ab8da168ba51aa77758a4947 300 Gene3D G3DSA:3.90.226.10 3 291 5.1E-95 T 14-10-2018 TMO_b0345 8262be75d9402c58edb354437a91dc0d 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 281 2.5E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0345 8262be75d9402c58edb354437a91dc0d 287 SUPERFAMILY SSF161098 25 279 3.83E-31 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0345 8262be75d9402c58edb354437a91dc0d 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 23 284 3.6E-77 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 TMO_b0345 8262be75d9402c58edb354437a91dc0d 287 Gene3D G3DSA:1.10.3720.10 68 287 4.4E-26 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2510 fd86461e83b6bcdf2f8e88c499b27374 321 Pfam PF12697 Alpha/beta hydrolase family 53 313 2.0E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2510 fd86461e83b6bcdf2f8e88c499b27374 321 SUPERFAMILY SSF53474 25 319 2.18E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2510 fd86461e83b6bcdf2f8e88c499b27374 321 Gene3D G3DSA:3.40.50.1820 37 320 7.6E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0485 247eaa76bb7350ad145fd3320a56bea5 393 SUPERFAMILY SSF56601 10 391 7.56E-90 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_a0485 247eaa76bb7350ad145fd3320a56bea5 393 Pfam PF00144 Beta-lactamase 13 379 3.1E-61 T 14-10-2018 IPR001466 Beta-lactamase-related TMO_a0485 247eaa76bb7350ad145fd3320a56bea5 393 Gene3D G3DSA:3.40.710.10 2 393 1.3E-115 T 14-10-2018 TMO_3177 89919eefed4a3ade8bbf9ee6079eeb08 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 7 200 4.9E-59 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_3177 89919eefed4a3ade8bbf9ee6079eeb08 212 Pfam PF02581 Thiamine monophosphate synthase 8 189 7.4E-58 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_3177 89919eefed4a3ade8bbf9ee6079eeb08 212 SUPERFAMILY SSF51391 4 207 1.02E-59 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_3177 89919eefed4a3ade8bbf9ee6079eeb08 212 Gene3D G3DSA:3.20.20.70 1 207 6.7E-68 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3177 89919eefed4a3ade8bbf9ee6079eeb08 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 207 25.917 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_1463 1a1aedce466247be0e492f1928f13ea3 410 SUPERFAMILY SSF53756 1 407 1.47E-82 T 14-10-2018 TMO_1463 1a1aedce466247be0e492f1928f13ea3 410 Gene3D G3DSA:3.40.50.2000 226 394 8.8E-102 T 14-10-2018 TMO_1463 1a1aedce466247be0e492f1928f13ea3 410 Gene3D G3DSA:3.40.50.2000 3 225 8.8E-102 T 14-10-2018 TMO_0139 caaa5e3b673babefd1649dc586d123cd 298 Gene3D G3DSA:1.10.3660.10 186 292 6.5E-34 T 14-10-2018 TMO_0139 caaa5e3b673babefd1649dc586d123cd 298 Gene3D G3DSA:3.40.50.720 9 185 5.7E-53 T 14-10-2018 TMO_0139 caaa5e3b673babefd1649dc586d123cd 298 SUPERFAMILY SSF48179 182 292 8.05E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_0139 caaa5e3b673babefd1649dc586d123cd 298 Pfam PF02153 Prephenate dehydrogenase 24 282 1.9E-72 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 TMO_0139 caaa5e3b673babefd1649dc586d123cd 298 SUPERFAMILY SSF51735 10 178 1.26E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1928 4c9f3cbca1b0fe78f2a289f023265ee7 1083 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 284 706 4.4E-142 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_1928 4c9f3cbca1b0fe78f2a289f023265ee7 1083 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 6 1083 13.538 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_1928 4c9f3cbca1b0fe78f2a289f023265ee7 1083 SMART SM00481 7 74 1.1E-6 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TMO_1928 4c9f3cbca1b0fe78f2a289f023265ee7 1083 Pfam PF14579 Helix-hairpin-helix motif 780 875 2.2E-13 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_1928 4c9f3cbca1b0fe78f2a289f023265ee7 1083 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 7 839 9.9E-141 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_1928 4c9f3cbca1b0fe78f2a289f023265ee7 1083 Gene3D G3DSA:3.20.20.140 1 261 1.1E-52 T 14-10-2018 TMO_2773 a55dde27f720063b6a6da8eaf561819b 628 Gene3D G3DSA:3.40.1010.10 348 472 3.4E-25 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TMO_2773 a55dde27f720063b6a6da8eaf561819b 628 Gene3D G3DSA:3.30.950.10 473 607 2.6E-50 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TMO_2773 a55dde27f720063b6a6da8eaf561819b 628 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 354 569 3.3E-35 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TMO_2773 a55dde27f720063b6a6da8eaf561819b 628 Gene3D G3DSA:3.30.420.180 209 341 1.9E-41 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 TMO_2773 a55dde27f720063b6a6da8eaf561819b 628 Pfam PF11760 Cobalamin synthesis G N-terminal 60 138 8.2E-26 T 14-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 TMO_2773 a55dde27f720063b6a6da8eaf561819b 628 SUPERFAMILY SSF159664 210 340 5.49E-39 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 TMO_2773 a55dde27f720063b6a6da8eaf561819b 628 Gene3D G3DSA:3.40.50.11220 42 133 2.6E-18 T 14-10-2018 TMO_2773 a55dde27f720063b6a6da8eaf561819b 628 Pfam PF01890 Cobalamin synthesis G C-terminus 217 337 3.2E-32 T 14-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 TMO_2773 a55dde27f720063b6a6da8eaf561819b 628 SUPERFAMILY SSF159672 10 224 4.45E-46 T 14-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 TMO_2773 a55dde27f720063b6a6da8eaf561819b 628 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 355 605 5.0E-82 T 14-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 TMO_2773 a55dde27f720063b6a6da8eaf561819b 628 SUPERFAMILY SSF53790 351 597 2.62E-51 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TMO_1557 59a91f2c2ebc5e2ffac4ded11e44815b 549 SMART SM00283 289 543 4.9E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_1557 59a91f2c2ebc5e2ffac4ded11e44815b 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 416 445 1.2E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1557 59a91f2c2ebc5e2ffac4ded11e44815b 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 414 1.2E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1557 59a91f2c2ebc5e2ffac4ded11e44815b 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 310 339 1.2E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1557 59a91f2c2ebc5e2ffac4ded11e44815b 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 464 493 1.2E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1557 59a91f2c2ebc5e2ffac4ded11e44815b 549 SUPERFAMILY SSF58104 227 539 9.68E-55 T 14-10-2018 TMO_1557 59a91f2c2ebc5e2ffac4ded11e44815b 549 Gene3D G3DSA:1.20.1480.50 159 255 2.9E-10 T 14-10-2018 TMO_1557 59a91f2c2ebc5e2ffac4ded11e44815b 549 Gene3D G3DSA:1.10.287.950 256 548 5.0E-51 T 14-10-2018 TMO_1557 59a91f2c2ebc5e2ffac4ded11e44815b 549 SMART SM00304 199 252 7.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_1557 59a91f2c2ebc5e2ffac4ded11e44815b 549 SMART SM00304 417 470 87.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_1557 59a91f2c2ebc5e2ffac4ded11e44815b 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 512 2.0E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_a0138 a333e5bbed4724578872a84819d1c397 394 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 213 9.5E-16 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_a0138 a333e5bbed4724578872a84819d1c397 394 SUPERFAMILY SSF47203 245 385 7.41E-32 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_a0138 a333e5bbed4724578872a84819d1c397 394 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 385 1.6E-23 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_a0138 a333e5bbed4724578872a84819d1c397 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 127 7.6E-15 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_a0138 a333e5bbed4724578872a84819d1c397 394 Gene3D G3DSA:2.40.110.10 131 242 4.4E-20 T 14-10-2018 TMO_a0138 a333e5bbed4724578872a84819d1c397 394 Gene3D G3DSA:1.20.140.10 245 389 3.4E-28 T 14-10-2018 TMO_a0138 a333e5bbed4724578872a84819d1c397 394 SUPERFAMILY SSF56645 1 234 5.1E-45 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_a0138 a333e5bbed4724578872a84819d1c397 394 Gene3D G3DSA:1.10.540.10 1 129 1.6E-21 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_0887 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 91 113 4.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_0887 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 184 202 4.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_0887 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 411 431 4.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_0887 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 212 231 4.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_0887 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 350 372 4.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_0887 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 4.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_0887 ef6322eb4cf93e447d4c6003536e5abd 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 3.7E-135 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_0887 ef6322eb4cf93e447d4c6003536e5abd 476 Pfam PF01235 Sodium:alanine symporter family 56 453 2.6E-143 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_b0562 a935a57226f7b5c16ac037c0f4347c7e 242 Gene3D G3DSA:1.10.10.10 4 83 5.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0562 a935a57226f7b5c16ac037c0f4347c7e 242 Gene3D G3DSA:3.40.1410.10 90 226 5.6E-21 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_b0562 a935a57226f7b5c16ac037c0f4347c7e 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 2.4E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0562 a935a57226f7b5c16ac037c0f4347c7e 242 Pfam PF07702 UTRA domain 94 225 1.3E-20 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_b0562 a935a57226f7b5c16ac037c0f4347c7e 242 SMART SM00345 13 72 2.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0562 a935a57226f7b5c16ac037c0f4347c7e 242 SUPERFAMILY SSF46785 6 84 7.02E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0562 a935a57226f7b5c16ac037c0f4347c7e 242 SMART SM00866 93 230 5.2E-17 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_b0562 a935a57226f7b5c16ac037c0f4347c7e 242 SUPERFAMILY SSF64288 60 236 1.35E-31 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_b0562 a935a57226f7b5c16ac037c0f4347c7e 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 5.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0562 a935a57226f7b5c16ac037c0f4347c7e 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 5.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0259 286a6c8abb6f902c41d121c9b094609a 325 Pfam PF03466 LysR substrate binding domain 105 317 7.8E-36 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_a0259 286a6c8abb6f902c41d121c9b094609a 325 Gene3D G3DSA:1.10.10.10 19 106 4.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0259 286a6c8abb6f902c41d121c9b094609a 325 Gene3D G3DSA:3.40.190.10 111 308 6.8E-39 T 14-10-2018 TMO_a0259 286a6c8abb6f902c41d121c9b094609a 325 Gene3D G3DSA:3.40.190.10 184 290 6.8E-39 T 14-10-2018 TMO_a0259 286a6c8abb6f902c41d121c9b094609a 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 79 1.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0259 286a6c8abb6f902c41d121c9b094609a 325 SUPERFAMILY SSF46785 19 128 1.5E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0259 286a6c8abb6f902c41d121c9b094609a 325 SUPERFAMILY SSF53850 106 321 1.63E-36 T 14-10-2018 TMO_b0078 2c00d47486fdd7d969eff91222877cc4 142 SMART SM00342 58 141 6.8E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0078 2c00d47486fdd7d969eff91222877cc4 142 Gene3D G3DSA:1.10.10.60 37 142 8.3E-28 T 14-10-2018 TMO_b0078 2c00d47486fdd7d969eff91222877cc4 142 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 95 137 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_b0078 2c00d47486fdd7d969eff91222877cc4 142 SUPERFAMILY SSF46689 95 141 8.51E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0078 2c00d47486fdd7d969eff91222877cc4 142 Pfam PF12833 Helix-turn-helix domain 64 141 4.9E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0078 2c00d47486fdd7d969eff91222877cc4 142 SUPERFAMILY SSF46689 42 92 4.78E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0164 1465767659ba046a5cc2db903addb321 558 Gene3D G3DSA:2.130.10.10 323 456 6.7E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TMO_0164 1465767659ba046a5cc2db903addb321 558 SUPERFAMILY SSF63825 37 298 1.05E-26 T 14-10-2018 TMO_0164 1465767659ba046a5cc2db903addb321 558 Gene3D G3DSA:2.130.10.10 31 311 1.1E-13 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TMO_0164 1465767659ba046a5cc2db903addb321 558 Gene3D G3DSA:2.120.10.30 457 558 3.2E-10 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TMO_0164 1465767659ba046a5cc2db903addb321 558 SUPERFAMILY SSF63829 342 557 2.94E-25 T 14-10-2018 TMO_1229 d3a020019719f134e2fce41789175aa3 445 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 24 90 2.6E-7 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1229 d3a020019719f134e2fce41789175aa3 445 Gene3D G3DSA:3.40.50.12240 13 440 2.0E-141 T 14-10-2018 TMO_1229 d3a020019719f134e2fce41789175aa3 445 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1229 d3a020019719f134e2fce41789175aa3 445 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 14 438 4.5E-162 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1229 d3a020019719f134e2fce41789175aa3 445 TIGRFAM TIGR03498 FliI_clade3: flagellar protein export ATPase FliI 22 438 5.8E-192 T 14-10-2018 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 GO:0009288|GO:0016887|GO:0030257|GO:0044781 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1229 d3a020019719f134e2fce41789175aa3 445 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 148 358 2.1E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1229 d3a020019719f134e2fce41789175aa3 445 SUPERFAMILY SSF52540 95 363 6.84E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1229 d3a020019719f134e2fce41789175aa3 445 SMART SM00382 160 343 4.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0314 496f333e1a73d15a9f967ad430caa3d1 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 2.5E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0314 496f333e1a73d15a9f967ad430caa3d1 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 2.5E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0314 496f333e1a73d15a9f967ad430caa3d1 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 2.5E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0314 496f333e1a73d15a9f967ad430caa3d1 309 SUPERFAMILY SSF53850 104 303 2.02E-38 T 14-10-2018 TMO_b0314 496f333e1a73d15a9f967ad430caa3d1 309 SUPERFAMILY SSF46785 15 94 2.36E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0314 496f333e1a73d15a9f967ad430caa3d1 309 Gene3D G3DSA:3.40.190.10 173 271 4.2E-59 T 14-10-2018 TMO_b0314 496f333e1a73d15a9f967ad430caa3d1 309 Gene3D G3DSA:1.10.10.10 16 102 1.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0314 496f333e1a73d15a9f967ad430caa3d1 309 Pfam PF03466 LysR substrate binding domain 101 299 2.3E-38 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0314 496f333e1a73d15a9f967ad430caa3d1 309 Gene3D G3DSA:3.40.190.10 113 298 4.2E-59 T 14-10-2018 TMO_b0314 496f333e1a73d15a9f967ad430caa3d1 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 76 1.4E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00387 380 496 9.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 Gene3D G3DSA:3.30.450.20 133 244 4.5E-17 T 14-10-2018 TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 Gene3D G3DSA:3.30.565.10 339 500 1.4E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 Gene3D G3DSA:3.30.450.20 13 132 7.6E-30 T 14-10-2018 TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00388 268 336 8.8E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 Pfam PF00989 PAS fold 14 125 3.9E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00086 206 248 0.0019 T 14-10-2018 IPR001610 PAC motif TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00086 88 129 0.87 T 14-10-2018 IPR001610 PAC motif TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 Pfam PF13426 PAS domain 150 246 9.0E-10 T 14-10-2018 IPR000014 PAS domain TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 SUPERFAMILY SSF47384 254 336 9.81E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 Gene3D G3DSA:1.10.287.130 245 335 8.2E-24 T 14-10-2018 TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 495 7.4E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00091 12 78 8.9E-12 T 14-10-2018 IPR000014 PAS domain TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00091 134 200 2.2E-4 T 14-10-2018 IPR000014 PAS domain TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 136 1.6E-27 T 14-10-2018 IPR000014 PAS domain TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 133 255 6.2E-17 T 14-10-2018 IPR000014 PAS domain TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 SUPERFAMILY SSF55785 23 137 2.75E-27 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 SUPERFAMILY SSF55785 128 246 3.01E-20 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 SUPERFAMILY SSF55874 325 493 4.58E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0506 cc88b1ea3c34f32f76107a0005105ca9 502 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 335 8.3E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0090 e2a7313c90dae5d9c01e814a314a2181 380 Pfam PF06812 ImpA, N-terminal, type VI secretion system 15 143 6.2E-31 T 14-10-2018 IPR010657 ImpA, N-terminal TMO_a0090 e2a7313c90dae5d9c01e814a314a2181 380 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 11 367 2.7E-74 T 14-10-2018 IPR017740 Type VI secretion system-associated, ImpA TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 SUPERFAMILY SSF81442 28 536 4.32E-148 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 Gene3D G3DSA:1.20.120.80 657 831 1.4E-10 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 Gene3D G3DSA:1.20.210.10 16 543 3.5E-165 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 39 484 2.7E-128 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 SUPERFAMILY SSF81452 581 819 8.27E-24 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 29 54 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 76 99 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 177 195 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 362 380 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 103 127 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 440 461 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 327 348 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 206 225 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 145 157 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 390 409 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 257 278 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 PRINTS PR01165 Cytochrome c oxidase subunit I signature 303 318 1.4E-73 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 30 534 8.6E-208 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 TMO_a0332 09ce4a0be9192e0c532a4aa09404fc67 839 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 259 313 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_3306 b68940385a67e3e5e49a0c2956f45407 385 Pfam PF00005 ABC transporter 20 161 2.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3306 b68940385a67e3e5e49a0c2956f45407 385 Gene3D G3DSA:2.40.50.940 222 376 2.2E-21 T 14-10-2018 TMO_3306 b68940385a67e3e5e49a0c2956f45407 385 SUPERFAMILY SSF50331 236 383 1.73E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_3306 b68940385a67e3e5e49a0c2956f45407 385 Gene3D G3DSA:3.40.50.300 4 221 8.6E-66 T 14-10-2018 TMO_3306 b68940385a67e3e5e49a0c2956f45407 385 Gene3D G3DSA:2.40.50.140 293 368 2.2E-21 T 14-10-2018 TMO_3306 b68940385a67e3e5e49a0c2956f45407 385 SUPERFAMILY SSF52540 4 242 7.91E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3306 b68940385a67e3e5e49a0c2956f45407 385 SMART SM00382 28 211 5.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3306 b68940385a67e3e5e49a0c2956f45407 385 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3257 505222051f41659e6ca5a0997632e9e9 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 143 9.7E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3257 505222051f41659e6ca5a0997632e9e9 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 50 61 9.7E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3257 505222051f41659e6ca5a0997632e9e9 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 199 9.7E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3257 505222051f41659e6ca5a0997632e9e9 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 98 114 9.7E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3257 505222051f41659e6ca5a0997632e9e9 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 9.7E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3257 505222051f41659e6ca5a0997632e9e9 234 Gene3D G3DSA:3.40.50.720 1 224 2.1E-65 T 14-10-2018 TMO_3257 505222051f41659e6ca5a0997632e9e9 234 SUPERFAMILY SSF51735 1 213 1.14E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3257 505222051f41659e6ca5a0997632e9e9 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 111 139 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_3257 505222051f41659e6ca5a0997632e9e9 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 104 112 4.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3257 505222051f41659e6ca5a0997632e9e9 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 143 4.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3257 505222051f41659e6ca5a0997632e9e9 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 50 61 4.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3257 505222051f41659e6ca5a0997632e9e9 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 1 213 3.9E-55 T 14-10-2018 TMO_a0181 78fe56dc48443655f9dbb9b339e6252d 472 SUPERFAMILY SSF53720 6 441 1.7E-108 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_a0181 78fe56dc48443655f9dbb9b339e6252d 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 212 219 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_a0181 78fe56dc48443655f9dbb9b339e6252d 472 Gene3D G3DSA:3.40.309.10 216 420 3.8E-143 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_a0181 78fe56dc48443655f9dbb9b339e6252d 472 Pfam PF00171 Aldehyde dehydrogenase family 10 439 2.3E-78 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_a0181 78fe56dc48443655f9dbb9b339e6252d 472 PIRSF PIRSF036492 1 471 1.6E-149 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 TMO_a0181 78fe56dc48443655f9dbb9b339e6252d 472 Gene3D G3DSA:3.40.605.10 14 440 3.8E-143 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_a0524 75afa1c41d2980137cb4dfc9fa85bb36 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 1.6E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0524 75afa1c41d2980137cb4dfc9fa85bb36 548 SUPERFAMILY SSF56801 29 541 1.7E-145 T 14-10-2018 TMO_a0524 75afa1c41d2980137cb4dfc9fa85bb36 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_a0524 75afa1c41d2980137cb4dfc9fa85bb36 548 Gene3D G3DSA:3.30.300.30 439 547 2.8E-30 T 14-10-2018 TMO_a0524 75afa1c41d2980137cb4dfc9fa85bb36 548 Pfam PF00501 AMP-binding enzyme 38 442 6.0E-80 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0524 75afa1c41d2980137cb4dfc9fa85bb36 548 Gene3D G3DSA:3.40.50.12780 12 437 2.0E-99 T 14-10-2018 TMO_1697 6266b44d62914805668edab48e7bc0d2 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 2.8E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_1697 6266b44d62914805668edab48e7bc0d2 96 PRINTS PR00297 10kDa chaperonin signature 81 94 2.7E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_1697 6266b44d62914805668edab48e7bc0d2 96 PRINTS PR00297 10kDa chaperonin signature 3 18 2.7E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_1697 6266b44d62914805668edab48e7bc0d2 96 PRINTS PR00297 10kDa chaperonin signature 25 46 2.7E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_1697 6266b44d62914805668edab48e7bc0d2 96 PRINTS PR00297 10kDa chaperonin signature 60 72 2.7E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_1697 6266b44d62914805668edab48e7bc0d2 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.374 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_1697 6266b44d62914805668edab48e7bc0d2 96 Gene3D G3DSA:2.30.33.40 1 96 8.9E-39 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 TMO_1697 6266b44d62914805668edab48e7bc0d2 96 SMART SM00883 2 94 1.8E-57 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_1697 6266b44d62914805668edab48e7bc0d2 96 SUPERFAMILY SSF50129 1 95 1.82E-36 T 14-10-2018 IPR011032 GroES-like superfamily TMO_1697 6266b44d62914805668edab48e7bc0d2 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 TMO_1290 696adedb82e55536b070104ce1e33577 521 Pfam PF00005 ABC transporter 284 437 1.4E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1290 696adedb82e55536b070104ce1e33577 521 SUPERFAMILY SSF52540 14 236 1.17E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1290 696adedb82e55536b070104ce1e33577 521 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1290 696adedb82e55536b070104ce1e33577 521 SMART SM00382 40 236 2.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1290 696adedb82e55536b070104ce1e33577 521 SMART SM00382 291 486 7.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1290 696adedb82e55536b070104ce1e33577 521 SUPERFAMILY SSF52540 284 490 2.99E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1290 696adedb82e55536b070104ce1e33577 521 Gene3D G3DSA:3.40.50.300 277 503 6.0E-40 T 14-10-2018 TMO_1290 696adedb82e55536b070104ce1e33577 521 Gene3D G3DSA:3.40.50.300 5 251 5.0E-56 T 14-10-2018 TMO_1290 696adedb82e55536b070104ce1e33577 521 Pfam PF00005 ABC transporter 31 180 1.9E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0303 83091f9e9794f5d14edb504bb5fb323c 384 Pfam PF00924 Mechanosensitive ion channel 153 344 3.5E-28 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TMO_a0303 83091f9e9794f5d14edb504bb5fb323c 384 SUPERFAMILY SSF50182 193 258 2.52E-14 T 14-10-2018 IPR010920 LSM domain superfamily TMO_2710 69cfcd6f991875c5f6f940c8f98d26cd 305 Pfam PF00696 Amino acid kinase family 37 280 2.6E-49 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TMO_2710 69cfcd6f991875c5f6f940c8f98d26cd 305 PIRSF PIRSF000728 19 305 3.2E-108 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TMO_2710 69cfcd6f991875c5f6f940c8f98d26cd 305 PRINTS PR00474 Glutamate 5-kinase family signature 255 275 7.0E-7 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TMO_2710 69cfcd6f991875c5f6f940c8f98d26cd 305 PRINTS PR00474 Glutamate 5-kinase family signature 205 232 7.0E-7 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TMO_2710 69cfcd6f991875c5f6f940c8f98d26cd 305 PRINTS PR00474 Glutamate 5-kinase family signature 67 81 7.0E-7 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TMO_2710 69cfcd6f991875c5f6f940c8f98d26cd 305 TIGRFAM TIGR00761 argB: acetylglutamate kinase 37 280 2.7E-76 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TMO_2710 69cfcd6f991875c5f6f940c8f98d26cd 305 Hamap MF_00082 Acetylglutamate kinase [argB]. 35 298 49.315 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TMO_2710 69cfcd6f991875c5f6f940c8f98d26cd 305 Gene3D G3DSA:3.40.1160.10 13 305 8.7E-97 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TMO_2710 69cfcd6f991875c5f6f940c8f98d26cd 305 SUPERFAMILY SSF53633 14 304 1.31E-92 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TMO_b0329 4da0778ed82ca4f6da6c0668802cee12 124 Pfam PF01804 Penicillin amidase 32 88 4.4E-10 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 TMO_b0329 4da0778ed82ca4f6da6c0668802cee12 124 SUPERFAMILY SSF56235 31 88 1.7E-11 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_b0329 4da0778ed82ca4f6da6c0668802cee12 124 Gene3D G3DSA:1.10.439.10 25 107 4.8E-22 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 TMO_2544 56dee95bb36960c8b55709aa940c43fc 333 Gene3D G3DSA:3.40.50.300 26 263 9.6E-59 T 14-10-2018 TMO_2544 56dee95bb36960c8b55709aa940c43fc 333 SMART SM00382 64 240 1.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2544 56dee95bb36960c8b55709aa940c43fc 333 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2544 56dee95bb36960c8b55709aa940c43fc 333 SUPERFAMILY SSF52540 34 266 1.07E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2544 56dee95bb36960c8b55709aa940c43fc 333 Pfam PF00005 ABC transporter 55 191 5.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2365 6bfce40561986d6eb2ada1a6dc11613b 256 Pfam PF12697 Alpha/beta hydrolase family 53 246 1.0E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2365 6bfce40561986d6eb2ada1a6dc11613b 256 SUPERFAMILY SSF53474 36 248 4.75E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2365 6bfce40561986d6eb2ada1a6dc11613b 256 Gene3D G3DSA:3.40.50.1820 36 253 1.4E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0945 d2150977a3a71388235a4071e3c7a2ac 440 SUPERFAMILY SSF53383 6 438 5.42E-127 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_0945 d2150977a3a71388235a4071e3c7a2ac 440 Pfam PF00202 Aminotransferase class-III 28 436 8.4E-98 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_0945 d2150977a3a71388235a4071e3c7a2ac 440 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_0945 d2150977a3a71388235a4071e3c7a2ac 440 Gene3D G3DSA:3.40.640.10 62 342 3.1E-154 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0945 d2150977a3a71388235a4071e3c7a2ac 440 Gene3D G3DSA:3.90.1150.10 26 431 3.1E-154 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_3472 670ca377a6744ebb06c65fcb3cabccec 376 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 38 374 8.6E-94 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 TMO_3472 670ca377a6744ebb06c65fcb3cabccec 376 Gene3D G3DSA:1.10.10.10 30 119 5.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3472 670ca377a6744ebb06c65fcb3cabccec 376 SUPERFAMILY SSF55781 107 375 2.35E-54 T 14-10-2018 TMO_3472 670ca377a6744ebb06c65fcb3cabccec 376 SUPERFAMILY SSF46785 37 117 8.61E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3472 670ca377a6744ebb06c65fcb3cabccec 376 Gene3D G3DSA:3.30.450.40 140 369 2.4E-33 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_3472 670ca377a6744ebb06c65fcb3cabccec 376 Pfam PF01628 HrcA protein C terminal domain 140 361 4.0E-54 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 TMO_3472 670ca377a6744ebb06c65fcb3cabccec 376 PIRSF PIRSF005485 34 376 2.9E-104 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 TMO_3472 670ca377a6744ebb06c65fcb3cabccec 376 Gene3D G3DSA:3.30.390.60 163 264 2.4E-33 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily TMO_3472 670ca377a6744ebb06c65fcb3cabccec 376 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 36 368 28.322 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 TMO_0224 411e7d7d83ab5b36873526a43e942c56 226 Gene3D G3DSA:2.60.120.620 1 226 5.1E-25 T 14-10-2018 TMO_0224 411e7d7d83ab5b36873526a43e942c56 226 Pfam PF10637 Oxoglutarate and iron-dependent oxygenase degradation C-term 2 184 8.1E-12 T 14-10-2018 IPR019601 Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain GO:0005506|GO:0016706|GO:0031418|GO:0055114 TMO_1230 52e6a41d7589f07a91cb084777c90758 146 Pfam PF02050 Flagellar FliJ protein 19 134 3.6E-11 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 TMO_c0337 6f69a4e23fdbf30eb991e39b32671655 353 PIRSF PIRSF005508 2 348 6.4E-129 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 TMO_c0337 6f69a4e23fdbf30eb991e39b32671655 353 Gene3D G3DSA:1.20.1530.20 5 336 8.3E-20 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily TMO_c0337 6f69a4e23fdbf30eb991e39b32671655 353 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 7 335 1.4E-127 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 TMO_c0337 6f69a4e23fdbf30eb991e39b32671655 353 Pfam PF01758 Sodium Bile acid symporter family 52 247 3.0E-59 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 TMO_0356 e3887765de40d37a4442cfd012bde372 159 Pfam PF14815 NUDIX domain 34 150 4.7E-21 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 TMO_0356 e3887765de40d37a4442cfd012bde372 159 Gene3D G3DSA:3.90.79.10 25 158 5.0E-42 T 14-10-2018 TMO_0356 e3887765de40d37a4442cfd012bde372 159 ProSitePatterns PS00893 Nudix box signature. 63 84 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_0356 e3887765de40d37a4442cfd012bde372 159 PRINTS PR00502 NUDIX hydrolase family signature 72 87 7.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TMO_0356 e3887765de40d37a4442cfd012bde372 159 PRINTS PR00502 NUDIX hydrolase family signature 58 72 7.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TMO_0356 e3887765de40d37a4442cfd012bde372 159 TIGRFAM TIGR00586 mutt: mutator mutT protein 32 154 3.1E-30 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 TMO_0356 e3887765de40d37a4442cfd012bde372 159 SUPERFAMILY SSF55811 26 154 8.39E-41 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 Gene3D G3DSA:3.40.190.10 144 371 1.9E-134 T 14-10-2018 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 Gene3D G3DSA:3.40.190.10 39 345 1.9E-134 T 14-10-2018 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 PIRSF PIRSF019574 7 377 1.9E-133 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 102 115 6.3E-55 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 276 295 6.3E-55 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 58 6.3E-55 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 135 151 6.3E-55 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 58 79 6.3E-55 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 321 347 6.3E-55 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 180 6.3E-55 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 226 245 6.3E-55 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 189 208 6.3E-55 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 SUPERFAMILY SSF53850 36 376 4.94E-100 T 14-10-2018 TMO_0290 dc5708a9114ef0dbd4011c9bde7a808d 379 Pfam PF13416 Bacterial extracellular solute-binding protein 54 342 2.9E-28 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 SUPERFAMILY SSF56801 500 1010 6.41E-118 T 14-10-2018 TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1023 1038 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 Gene3D G3DSA:3.40.50.12780 492 890 1.2E-98 T 14-10-2018 TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 Pfam PF00501 AMP-binding enzyme 506 896 3.8E-66 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 SUPERFAMILY SSF47336 994 1063 5.61E-16 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 SUPERFAMILY SSF52777 47 219 3.04E-50 T 14-10-2018 TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 Gene3D G3DSA:3.30.559.10 1084 1212 2.1E-29 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 Gene3D G3DSA:3.30.559.30 223 470 1.7E-137 T 14-10-2018 TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 Gene3D G3DSA:3.30.559.10 46 413 1.7E-137 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 Pfam PF13193 AMP-binding enzyme C-terminal domain 904 974 2.2E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 SUPERFAMILY SSF52777 230 474 1.17E-54 T 14-10-2018 TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 ProSitePatterns PS00455 Putative AMP-binding domain signature. 644 655 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 524 920 2.5E-101 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 Gene3D G3DSA:1.10.1200.10 987 1072 2.0E-22 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 Pfam PF00550 Phosphopantetheine attachment site 1001 1062 2.7E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 SMART SM00823 Phosphopantetheine attachment site 998 1067 8.1E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 SUPERFAMILY SSF52777 1090 1210 1.78E-23 T 14-10-2018 TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 Pfam PF00668 Condensation domain 1085 1209 1.8E-12 T 14-10-2018 IPR001242 Condensation domain TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 Pfam PF00668 Condensation domain 44 479 1.1E-87 T 14-10-2018 IPR001242 Condensation domain TMO_c0609 650b2c3eda7b363104519f9dc8bdd936 1286 Gene3D G3DSA:3.30.300.30 891 986 5.5E-32 T 14-10-2018 TMO_b0148 834b99105be3f2f2521f8ed717741243 193 SUPERFAMILY SSF48498 77 190 1.52E-26 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_b0148 834b99105be3f2f2521f8ed717741243 193 Gene3D G3DSA:1.10.357.10 1 192 2.4E-65 T 14-10-2018 TMO_b0148 834b99105be3f2f2521f8ed717741243 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 6.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0148 834b99105be3f2f2521f8ed717741243 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.5E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0148 834b99105be3f2f2521f8ed717741243 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.5E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0148 834b99105be3f2f2521f8ed717741243 193 SUPERFAMILY SSF46689 5 83 3.06E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0484 660610793ca22fca366581d285525150 199 Pfam PF01047 MarR family 42 97 2.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_b0484 660610793ca22fca366581d285525150 199 Gene3D G3DSA:1.10.10.10 5 149 3.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0484 660610793ca22fca366581d285525150 199 SMART SM00347 32 134 9.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_b0484 660610793ca22fca366581d285525150 199 SUPERFAMILY SSF46785 11 145 1.97E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0484 660610793ca22fca366581d285525150 199 ProSitePatterns PS01117 MarR-type HTH domain signature. 71 105 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_c0441 e8dcced72996b5cb14cec5f2793efa90 1262 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1150 1219 6.9E-11 T 14-10-2018 TMO_c0441 e8dcced72996b5cb14cec5f2793efa90 1262 SUPERFAMILY SSF52540 1 1237 3.27E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0441 e8dcced72996b5cb14cec5f2793efa90 1262 Pfam PF13476 AAA domain 5 218 7.6E-21 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain TMO_c0441 e8dcced72996b5cb14cec5f2793efa90 1262 Gene3D G3DSA:3.40.50.300 996 1261 1.1E-22 T 14-10-2018 TMO_c0441 e8dcced72996b5cb14cec5f2793efa90 1262 Gene3D G3DSA:3.40.50.300 1 327 2.8E-39 T 14-10-2018 TMO_a0398 ecd97b812870983bed16fb79c559ad50 291 SUPERFAMILY SSF64288 59 237 4.71E-43 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_a0398 ecd97b812870983bed16fb79c559ad50 291 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 2.2E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0398 ecd97b812870983bed16fb79c559ad50 291 SMART SM00345 12 71 1.1E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0398 ecd97b812870983bed16fb79c559ad50 291 SMART SM00866 93 232 2.0E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_a0398 ecd97b812870983bed16fb79c559ad50 291 Pfam PF07702 UTRA domain 93 231 4.7E-29 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_a0398 ecd97b812870983bed16fb79c559ad50 291 Gene3D G3DSA:1.10.10.10 5 80 5.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0398 ecd97b812870983bed16fb79c559ad50 291 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.9E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0398 ecd97b812870983bed16fb79c559ad50 291 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.9E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0398 ecd97b812870983bed16fb79c559ad50 291 Gene3D G3DSA:3.40.1410.10 83 240 1.6E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_a0398 ecd97b812870983bed16fb79c559ad50 291 SUPERFAMILY SSF46785 9 75 1.56E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1727 198df58f87e54f864c68b7c98ad0d9fb 318 Hamap MF_01384 Urease accessory protein UreD [ureD]. 12 302 22.751 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 TMO_1727 198df58f87e54f864c68b7c98ad0d9fb 318 Pfam PF01774 UreD urease accessory protein 59 292 3.4E-41 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 295 302 9.1E-66 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 331 352 9.1E-66 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 252 266 9.1E-66 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 438 9.1E-66 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.1E-66 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 133 142 9.1E-66 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 9.1E-66 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 9.1E-66 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 9.1E-66 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 SUPERFAMILY SSF55424 332 444 3.26E-36 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_2302 f733e5707151be707deff43252a9d91f 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TMO_2302 f733e5707151be707deff43252a9d91f 449 PIRSF PIRSF000350 1 442 1.3E-88 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TMO_2302 f733e5707151be707deff43252a9d91f 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 315 4.8E-67 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_2302 f733e5707151be707deff43252a9d91f 449 Gene3D G3DSA:3.50.50.60 4 319 1.7E-113 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2302 f733e5707151be707deff43252a9d91f 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 336 443 4.0E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.9E-29 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 130 148 4.9E-29 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 267 4.9E-29 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.9E-29 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 302 4.9E-29 T 14-10-2018 TMO_2302 f733e5707151be707deff43252a9d91f 449 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 2 444 4.7E-185 T 14-10-2018 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 TMO_2302 f733e5707151be707deff43252a9d91f 449 Gene3D G3DSA:3.30.390.30 335 449 3.1E-43 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_2302 f733e5707151be707deff43252a9d91f 449 Gene3D G3DSA:3.50.50.60 142 258 1.7E-113 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2302 f733e5707151be707deff43252a9d91f 449 SUPERFAMILY SSF51905 1 361 4.86E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1572 fe3574242bb67a4afa89a01b728f4195 353 SUPERFAMILY SSF111337 1 344 2.49E-123 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TMO_1572 fe3574242bb67a4afa89a01b728f4195 353 Pfam PF02547 Queuosine biosynthesis protein 4 344 1.5E-124 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TMO_1572 fe3574242bb67a4afa89a01b728f4195 353 Gene3D G3DSA:2.40.10.240 62 165 2.0E-107 T 14-10-2018 TMO_1572 fe3574242bb67a4afa89a01b728f4195 353 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 2.8E-109 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TMO_1572 fe3574242bb67a4afa89a01b728f4195 353 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 345 43.878 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TMO_1572 fe3574242bb67a4afa89a01b728f4195 353 Gene3D G3DSA:3.40.1780.10 14 344 2.0E-107 T 14-10-2018 TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 SUPERFAMILY SSF46894 247 316 2.48E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 ProSitePatterns PS00622 LuxR-type HTH domain signature. 274 301 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 SMART SM00448 8 121 7.3E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 SUPERFAMILY SSF52172 10 140 9.82E-39 T 14-10-2018 IPR011006 CheY-like superfamily TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 Pfam PF00072 Response regulator receiver domain 10 122 9.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 Pfam PF00196 Bacterial regulatory proteins, luxR family 260 313 2.5E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 260 274 2.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 274 290 2.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 290 302 2.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 Gene3D G3DSA:1.10.10.10 253 320 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 Gene3D G3DSA:3.40.50.12740 9 177 2.0E-45 T 14-10-2018 TMO_a0471 de11eec6c23167670cf5f63dad3a890d 321 SMART SM00421 257 314 9.8E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 SMART SM00823 Phosphopantetheine attachment site 1711 1780 2.0E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1419 1581 1.1E-10 T 14-10-2018 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 Gene3D G3DSA:3.40.50.12780 702 1138 7.0E-103 T 14-10-2018 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 SUPERFAMILY SSF56801 700 1256 1.83E-88 T 14-10-2018 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 Gene3D G3DSA:3.40.50.720 1301 1631 9.8E-44 T 14-10-2018 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 Pfam PF00668 Condensation domain 58 492 1.4E-41 T 14-10-2018 IPR001242 Condensation domain TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 Gene3D G3DSA:3.30.300.30 544 639 5.8E-11 T 14-10-2018 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 Pfam PF00501 AMP-binding enzyme 716 1145 1.2E-52 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 Gene3D G3DSA:3.40.50.1820 1701 1793 1.6E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1735 1750 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 Gene3D G3DSA:3.30.559.10 60 427 1.8E-77 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 SUPERFAMILY SSF51735 1417 1611 1.1E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 SUPERFAMILY SSF47336 1704 1777 3.93E-19 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 ProSitePatterns PS00455 Putative AMP-binding domain signature. 861 872 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 SUPERFAMILY SSF52777 245 481 3.34E-39 T 14-10-2018 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 SUPERFAMILY SSF52777 57 256 2.0E-31 T 14-10-2018 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 SMART SM01294 1712 1776 0.0054 T 14-10-2018 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 Pfam PF08659 KR domain 1421 1579 3.3E-19 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 Gene3D G3DSA:3.30.300.30 1140 1255 5.1E-26 T 14-10-2018 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 Pfam PF00550 Phosphopantetheine attachment site 1713 1776 6.6E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 Gene3D G3DSA:3.30.559.30 240 478 1.8E-77 T 14-10-2018 TMO_c0603 1dea415e946467183ece5c64091e7b98 1796 SUPERFAMILY SSF56801 501 640 1.02E-12 T 14-10-2018 TMO_b0191 5f6190d8a71bee90b6b3c7e9ab3f7fac 337 Pfam PF02780 Transketolase, C-terminal domain 210 327 2.5E-34 T 14-10-2018 IPR033248 Transketolase, C-terminal domain TMO_b0191 5f6190d8a71bee90b6b3c7e9ab3f7fac 337 Gene3D G3DSA:3.40.50.970 2 203 5.8E-93 T 14-10-2018 TMO_b0191 5f6190d8a71bee90b6b3c7e9ab3f7fac 337 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 9.5E-46 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_b0191 5f6190d8a71bee90b6b3c7e9ab3f7fac 337 SUPERFAMILY SSF52518 2 219 9.64E-72 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_b0191 5f6190d8a71bee90b6b3c7e9ab3f7fac 337 SMART SM00861 4 179 4.6E-70 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_b0191 5f6190d8a71bee90b6b3c7e9ab3f7fac 337 Gene3D G3DSA:3.40.50.920 204 337 1.1E-53 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_b0191 5f6190d8a71bee90b6b3c7e9ab3f7fac 337 SUPERFAMILY SSF52922 205 335 2.62E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_0935 c9178d99e6bf7f5e8715711effc916db 405 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 93 402 2.1E-89 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_0935 c9178d99e6bf7f5e8715711effc916db 405 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 215 229 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_0935 c9178d99e6bf7f5e8715711effc916db 405 SMART SM00363 94 152 1.4E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_0935 c9178d99e6bf7f5e8715711effc916db 405 SUPERFAMILY SSF55120 153 402 3.12E-73 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_0935 c9178d99e6bf7f5e8715711effc916db 405 Pfam PF01479 S4 domain 95 139 2.4E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_0935 c9178d99e6bf7f5e8715711effc916db 405 Pfam PF00849 RNA pseudouridylate synthase 169 332 2.7E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_0935 c9178d99e6bf7f5e8715711effc916db 405 Gene3D G3DSA:3.10.290.10 82 152 1.2E-14 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TMO_0935 c9178d99e6bf7f5e8715711effc916db 405 Gene3D G3DSA:3.30.2350.10 160 404 2.2E-75 T 14-10-2018 TMO_0935 c9178d99e6bf7f5e8715711effc916db 405 SUPERFAMILY SSF55174 92 181 1.03E-9 T 14-10-2018 TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 Gene3D G3DSA:1.10.10.10 14 89 8.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 Gene3D G3DSA:1.20.120.530 103 243 5.6E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 Pfam PF04909 Amidohydrolase 283 546 4.7E-45 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 Gene3D G3DSA:3.20.20.140 269 550 4.0E-87 T 14-10-2018 TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 SUPERFAMILY SSF51556 279 546 8.51E-76 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 Pfam PF07729 FCD domain 110 234 2.1E-19 T 14-10-2018 IPR011711 GntR, C-terminal TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 5.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 5.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 SMART SM00345 26 85 8.2E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 SMART SM00895 109 235 2.1E-15 T 14-10-2018 IPR011711 GntR, C-terminal TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 SUPERFAMILY SSF48008 105 240 2.62E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 1.4E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0644 26a38449a27ad8b7c5feb53c0d57eed6 551 SUPERFAMILY SSF46785 17 89 1.01E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 SUPERFAMILY SSF82714 185 266 3.14E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 SUPERFAMILY SSF82714 692 779 1.07E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 PRINTS PR00702 Acriflavin resistance protein family signature 535 552 3.5E-55 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.5E-55 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.5E-55 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.5E-55 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 3.5E-55 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.5E-55 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 3.5E-55 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.5E-55 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 SUPERFAMILY SSF82866 295 490 1.44E-38 T 14-10-2018 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 Gene3D G3DSA:3.30.70.1320 137 327 3.0E-258 T 14-10-2018 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 Gene3D G3DSA:1.20.1640.10 13 502 3.0E-258 T 14-10-2018 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 Gene3D G3DSA:1.20.1640.10 503 996 3.0E-258 T 14-10-2018 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 Gene3D G3DSA:3.30.70.1440 643 840 3.0E-258 T 14-10-2018 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 SUPERFAMILY SSF82693 141 315 5.23E-11 T 14-10-2018 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 SUPERFAMILY SSF82693 548 643 1.74E-16 T 14-10-2018 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 Pfam PF00873 AcrB/AcrD/AcrF family 6 1000 1.8E-210 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 Gene3D G3DSA:3.30.70.1430 550 642 3.0E-258 T 14-10-2018 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 SUPERFAMILY SSF82693 44 135 3.66E-16 T 14-10-2018 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 SUPERFAMILY SSF82866 782 1000 2.22E-43 T 14-10-2018 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 Gene3D G3DSA:3.30.70.1430 42 790 3.0E-258 T 14-10-2018 TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 Gene3D G3DSA:3.30.2090.10 691 782 3.0E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_b0068 f6dca49588f6d7edb02bb9fa58650db7 1020 Gene3D G3DSA:3.30.2090.10 181 271 3.0E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0222 ba30f5751d50c55df0d83af8f614b870 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 1 14 3.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0222 ba30f5751d50c55df0d83af8f614b870 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 45 3.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0222 ba30f5751d50c55df0d83af8f614b870 207 Gene3D G3DSA:1.10.357.10 49 206 2.7E-37 T 14-10-2018 TMO_c0222 ba30f5751d50c55df0d83af8f614b870 207 Pfam PF09209 Domain of unknown function (DUF1956) 85 200 4.0E-22 T 14-10-2018 IPR015292 Transcription regulator YbiH, C-terminal TMO_c0222 ba30f5751d50c55df0d83af8f614b870 207 SUPERFAMILY SSF46689 1 66 5.13E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0222 ba30f5751d50c55df0d83af8f614b870 207 SUPERFAMILY SSF48498 78 200 7.56E-22 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_c0222 ba30f5751d50c55df0d83af8f614b870 207 Gene3D G3DSA:1.10.10.60 1 47 2.1E-17 T 14-10-2018 TMO_c0222 ba30f5751d50c55df0d83af8f614b870 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 47 5.6E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SUPERFAMILY SSF51126 290 546 1.76E-9 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SMART SM00710 525 554 4800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SMART SM00710 643 665 5600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SMART SM00710 472 493 3400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SMART SM00710 202 223 2700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SMART SM00710 898 928 1600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SMART SM00710 595 617 6100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SMART SM00710 671 693 1500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SMART SM00710 354 381 3100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SMART SM00710 384 409 4800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SMART SM00710 558 587 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SMART SM00710 415 437 1500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 Pfam PF14252 Domain of unknown function (DUF4347) 112 280 8.9E-54 T 14-10-2018 IPR025592 Domain of unknown function DUF4347 TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 SUPERFAMILY SSF51126 505 781 7.53E-20 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 Pfam PF16184 Cadherin-like 1065 1155 1.0E-14 T 14-10-2018 TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 Pfam PF16184 Cadherin-like 1321 1416 2.2E-21 T 14-10-2018 TMO_c0896 efafb1cb174ca1934c81748018ed99de 1872 TIGRFAM TIGR01376 POMP_repeat: chlamydial polymorphic outer membrane protein repeat 476 495 0.0018 T 14-10-2018 IPR003368 Polymorphic outer membrane protein repeat TMO_0391 f8550e7726ffae7e9d8884b83dd49a0f 420 Pfam PF13000 Acetyl-coenzyme A transporter 1 11 156 7.3E-21 T 14-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 TMO_0391 f8550e7726ffae7e9d8884b83dd49a0f 420 SUPERFAMILY SSF103473 8 406 6.28E-20 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0391 f8550e7726ffae7e9d8884b83dd49a0f 420 TIGRFAM TIGR02718 sider_RhtX_FptX: siderophore transporter, RhtX/FptX family 12 398 8.1E-120 T 14-10-2018 IPR014090 Siderophore transporter, RhtX/FptX family TMO_0391 f8550e7726ffae7e9d8884b83dd49a0f 420 Gene3D G3DSA:1.20.1250.20 6 407 3.0E-19 T 14-10-2018 TMO_3078 b82e9a48b9397d5c6f7e8d4787e614c8 224 PIRSF PIRSF002764 1 224 1.9E-73 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria TMO_3078 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 57 74 6.7E-64 T 14-10-2018 TMO_3078 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 80 103 6.7E-64 T 14-10-2018 TMO_3078 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 105 123 6.7E-64 T 14-10-2018 TMO_3078 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 197 220 6.7E-64 T 14-10-2018 TMO_3078 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 31 52 6.7E-64 T 14-10-2018 TMO_3078 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 136 159 6.7E-64 T 14-10-2018 TMO_3078 b82e9a48b9397d5c6f7e8d4787e614c8 224 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 10 220 1.5E-68 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria TMO_3078 b82e9a48b9397d5c6f7e8d4787e614c8 224 Pfam PF03379 CcmB protein 8 220 6.8E-70 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_b0075 699833315a927130285bb9cee96242be 376 PIRSF PIRSF039026 8 360 3.9E-92 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like TMO_b0075 699833315a927130285bb9cee96242be 376 Gene3D G3DSA:3.40.190.170 39 342 3.8E-98 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_b0075 699833315a927130285bb9cee96242be 376 Gene3D G3DSA:3.40.190.10 157 329 3.8E-98 T 14-10-2018 TMO_b0075 699833315a927130285bb9cee96242be 376 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 44 321 3.0E-48 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_a0207 4f656bd05644e0374680b960cde4312a 502 Gene3D G3DSA:3.30.750.24 394 491 9.0E-29 T 14-10-2018 IPR036513 STAS domain superfamily TMO_a0207 4f656bd05644e0374680b960cde4312a 502 SUPERFAMILY SSF52091 402 492 7.26E-11 T 14-10-2018 IPR036513 STAS domain superfamily TMO_a0207 4f656bd05644e0374680b960cde4312a 502 Pfam PF01740 STAS domain 413 492 2.6E-5 T 14-10-2018 IPR002645 STAS domain TMO_a0207 4f656bd05644e0374680b960cde4312a 502 Pfam PF00916 Sulfate permease family 24 153 1.3E-25 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TMO_a0207 4f656bd05644e0374680b960cde4312a 502 Pfam PF00916 Sulfate permease family 173 364 4.3E-28 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TMO_0390 8b498fc7e846bdf82b493ddb4d5cb76c 715 SUPERFAMILY SSF56935 31 715 2.98E-140 T 14-10-2018 TMO_0390 8b498fc7e846bdf82b493ddb4d5cb76c 715 Gene3D G3DSA:2.40.170.20 186 715 3.9E-134 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_0390 8b498fc7e846bdf82b493ddb4d5cb76c 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 174 5.0E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_0390 8b498fc7e846bdf82b493ddb4d5cb76c 715 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 713 9.4E-126 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_0390 8b498fc7e846bdf82b493ddb4d5cb76c 715 Gene3D G3DSA:2.170.130.10 50 185 1.3E-44 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_0390 8b498fc7e846bdf82b493ddb4d5cb76c 715 Pfam PF00593 TonB dependent receptor 277 714 1.7E-58 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_b0379 70a2d32422f83c89cec23615d1259967 549 SUPERFAMILY SSF52540 285 532 1.59E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0379 70a2d32422f83c89cec23615d1259967 549 Gene3D G3DSA:3.40.50.300 284 547 6.5E-84 T 14-10-2018 TMO_b0379 70a2d32422f83c89cec23615d1259967 549 Gene3D G3DSA:3.40.50.300 11 283 2.5E-87 T 14-10-2018 TMO_b0379 70a2d32422f83c89cec23615d1259967 549 SUPERFAMILY SSF52540 13 264 2.09E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0379 70a2d32422f83c89cec23615d1259967 549 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0379 70a2d32422f83c89cec23615d1259967 549 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0379 70a2d32422f83c89cec23615d1259967 549 Pfam PF00005 ABC transporter 311 460 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0379 70a2d32422f83c89cec23615d1259967 549 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 512 537 0.13 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_b0379 70a2d32422f83c89cec23615d1259967 549 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 279 1.2E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_b0379 70a2d32422f83c89cec23615d1259967 549 SMART SM00382 42 243 9.4E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0379 70a2d32422f83c89cec23615d1259967 549 SMART SM00382 319 510 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0379 70a2d32422f83c89cec23615d1259967 549 Pfam PF00005 ABC transporter 34 193 5.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0450 afda254c368a926b87717ae2ce71a050 196 PIRSF PIRSF001296 5 193 1.2E-67 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 TMO_0450 afda254c368a926b87717ae2ce71a050 196 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 7 189 1.7E-55 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 TMO_0450 afda254c368a926b87717ae2ce71a050 196 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 6 190 33.306 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 TMO_0450 afda254c368a926b87717ae2ce71a050 196 Pfam PF02669 K+-transporting ATPase, c chain 10 188 3.4E-64 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 TMO_b0038 7c6338ae591f44232c5fa406abe7e09a 525 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 437 2.1E-74 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_b0038 7c6338ae591f44232c5fa406abe7e09a 525 Gene3D G3DSA:3.90.76.10 67 181 1.1E-97 T 14-10-2018 TMO_b0038 7c6338ae591f44232c5fa406abe7e09a 525 SUPERFAMILY SSF53850 31 523 1.43E-106 T 14-10-2018 TMO_b0038 7c6338ae591f44232c5fa406abe7e09a 525 Gene3D G3DSA:3.40.190.10 45 508 1.1E-97 T 14-10-2018 TMO_b0038 7c6338ae591f44232c5fa406abe7e09a 525 PIRSF PIRSF002741 2 523 2.9E-75 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_b0038 7c6338ae591f44232c5fa406abe7e09a 525 Gene3D G3DSA:3.10.105.10 288 496 1.1E-97 T 14-10-2018 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 Pfam PF00199 Catalase 40 425 1.8E-175 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 370 378 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 PRINTS PR00067 Catalase signature 116 134 3.9E-63 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 PRINTS PR00067 Catalase signature 325 352 3.9E-63 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 PRINTS PR00067 Catalase signature 137 154 3.9E-63 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 PRINTS PR00067 Catalase signature 357 383 3.9E-63 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 PRINTS PR00067 Catalase signature 53 76 3.9E-63 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 PRINTS PR00067 Catalase signature 156 174 3.9E-63 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 PIRSF PIRSF038927 18 706 4.1E-295 T 14-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 SMART SM01060 40 428 1.1E-261 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 Gene3D G3DSA:3.40.50.880 549 704 9.2E-27 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 Gene3D G3DSA:1.20.1370.20 451 548 6.8E-29 T 14-10-2018 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 SUPERFAMILY SSF52317 553 699 8.01E-16 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 Pfam PF06628 Catalase-related immune-responsive 454 517 7.8E-23 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 Gene3D G3DSA:2.40.180.10 2 445 7.3E-198 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_a0600 c24b5962a79673d5168faca97a1f928d 706 SUPERFAMILY SSF56634 31 523 3.53E-210 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0479 1b7b755d760052fcc46d2f66d913bee2 421 SUPERFAMILY SSF103473 28 417 6.02E-36 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0479 1b7b755d760052fcc46d2f66d913bee2 421 Pfam PF07690 Major Facilitator Superfamily 37 384 3.5E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0479 1b7b755d760052fcc46d2f66d913bee2 421 Gene3D G3DSA:1.20.1250.20 26 415 7.0E-33 T 14-10-2018 TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 Pfam PF00072 Response regulator receiver domain 5 116 8.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 Pfam PF02954 Bacterial regulatory protein, Fis family 415 453 5.7E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 SUPERFAMILY SSF46689 355 458 3.49E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 SUPERFAMILY SSF52172 4 187 2.28E-39 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 Gene3D G3DSA:3.40.50.300 134 313 2.9E-56 T 14-10-2018 TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 Pfam PF00158 Sigma-54 interaction domain 142 308 5.4E-57 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 SUPERFAMILY SSF52540 141 376 9.46E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 Gene3D G3DSA:1.10.10.60 407 460 8.0E-14 T 14-10-2018 TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 SMART SM00382 162 305 5.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 SMART SM00448 3 116 5.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 Gene3D G3DSA:3.40.50.2300 2 133 2.0E-34 T 14-10-2018 TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_1702 df8db96b3dd03ea73b0599ac7bba98f5 461 Gene3D G3DSA:1.10.8.60 314 389 1.3E-20 T 14-10-2018 TMO_1635 d7d3881e3b7e70150fc8209f6ae6ab9b 281 Pfam PF04116 Fatty acid hydroxylase superfamily 100 234 1.7E-24 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 TMO_a0343 5ab2e1fe98686ac8046c310d23065890 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 8.5E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_a0343 5ab2e1fe98686ac8046c310d23065890 314 Gene3D G3DSA:1.10.3720.10 86 304 8.2E-21 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0343 5ab2e1fe98686ac8046c310d23065890 314 SUPERFAMILY SSF161098 89 297 1.42E-16 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0571 f0b335781f6173524ee612107a684e64 1160 SUPERFAMILY SSF55785 658 770 2.26E-12 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0571 f0b335781f6173524ee612107a684e64 1160 Pfam PF00512 His Kinase A (phospho-acceptor) domain 799 860 2.5E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 SMART SM00387 904 1015 2.8E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0571 f0b335781f6173524ee612107a684e64 1160 Gene3D G3DSA:3.30.450.20 633 764 6.6E-16 T 14-10-2018 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 Gene3D G3DSA:3.40.50.2300 1034 1158 1.3E-16 T 14-10-2018 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 Gene3D G3DSA:1.20.1730.10 34 478 2.2E-15 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily TMO_c0571 f0b335781f6173524ee612107a684e64 1160 SUPERFAMILY SSF47384 786 860 5.69E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 SUPERFAMILY SSF52172 1034 1154 1.1E-18 T 14-10-2018 IPR011006 CheY-like superfamily TMO_c0571 f0b335781f6173524ee612107a684e64 1160 Pfam PF00072 Response regulator receiver domain 1037 1147 1.5E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 SMART SM00448 1035 1147 5.0E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 SMART SM00388 799 860 6.7E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 905 1013 1.6E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0571 f0b335781f6173524ee612107a684e64 1160 Pfam PF12860 PAS fold 652 765 1.1E-33 T 14-10-2018 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 Gene3D G3DSA:3.30.565.10 869 1021 1.3E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0571 f0b335781f6173524ee612107a684e64 1160 PRINTS PR00344 Bacterial sensor protein C-terminal signature 975 993 2.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 PRINTS PR00344 Bacterial sensor protein C-terminal signature 999 1012 2.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 PRINTS PR00344 Bacterial sensor protein C-terminal signature 958 968 2.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 PRINTS PR00344 Bacterial sensor protein C-terminal signature 940 954 2.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 Gene3D G3DSA:1.10.287.130 765 858 6.7E-11 T 14-10-2018 TMO_c0571 f0b335781f6173524ee612107a684e64 1160 SUPERFAMILY SSF55874 850 1013 2.1E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.4E-68 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 2.4E-68 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 2.4E-68 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.4E-68 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 2.4E-68 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.4E-68 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 2.4E-68 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 2.4E-68 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.4E-68 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 455 3.8E-31 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 SUPERFAMILY SSF55424 344 464 5.15E-34 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 Gene3D G3DSA:3.50.50.60 8 332 2.3E-111 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 Gene3D G3DSA:3.30.390.30 345 465 2.4E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 465 4.0E-149 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 2.2E-37 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 2.2E-37 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.2E-37 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.2E-37 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 2.2E-37 T 14-10-2018 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 327 4.3E-67 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 Gene3D G3DSA:3.50.50.60 152 271 2.3E-111 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 SUPERFAMILY SSF51905 2 337 5.72E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TMO_b0193 7072893bc2b9af144fe7196e6d6dd249 465 PIRSF PIRSF000350 2 457 1.3E-81 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TMO_0804 60d838b78689c5505646825bfdd11a39 219 Pfam PF00005 ABC transporter 17 161 1.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0804 60d838b78689c5505646825bfdd11a39 219 SUPERFAMILY SSF52540 2 216 1.36E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0804 60d838b78689c5505646825bfdd11a39 219 Gene3D G3DSA:3.40.50.300 1 219 6.4E-51 T 14-10-2018 TMO_0804 60d838b78689c5505646825bfdd11a39 219 SMART SM00382 26 210 1.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0804 60d838b78689c5505646825bfdd11a39 219 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 Gene3D G3DSA:3.30.460.100 590 832 5.9E-65 T 14-10-2018 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 Gene3D G3DSA:3.30.460.100 81 309 1.7E-61 T 14-10-2018 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 105 307 1.9E-60 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 581 822 5.2E-62 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 SUPERFAMILY SSF81301 554 835 1.63E-67 T 14-10-2018 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 Gene3D G3DSA:1.20.120.330 838 988 2.0E-19 T 14-10-2018 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 Gene3D G3DSA:1.20.120.330 315 472 3.5E-49 T 14-10-2018 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 Pfam PF08335 GlnD PII-uridylyltransferase 847 983 2.2E-9 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 Pfam PF08335 GlnD PII-uridylyltransferase 329 469 4.2E-38 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 SUPERFAMILY SSF81301 36 316 5.56E-62 T 14-10-2018 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 SUPERFAMILY SSF81593 836 985 6.36E-27 T 14-10-2018 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 SUPERFAMILY SSF81593 318 469 4.63E-39 T 14-10-2018 TMO_c0685 f4320b0f2788b4df74308e08ee10f840 1010 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 58 972 16.876 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 TMO_b0411 ef2d0899f335f3bd39fe02365bce6fe9 139 SUPERFAMILY SSF46785 5 138 3.71E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0411 ef2d0899f335f3bd39fe02365bce6fe9 139 Gene3D G3DSA:1.10.10.10 1 138 5.7E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0411 ef2d0899f335f3bd39fe02365bce6fe9 139 SMART SM00347 26 126 9.0E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_b0411 ef2d0899f335f3bd39fe02365bce6fe9 139 Pfam PF12802 MarR family 34 90 8.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2882 a3c302fbe61ed2730e5cfdad8296db33 378 Gene3D G3DSA:3.40.640.10 1 241 8.2E-40 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_2882 a3c302fbe61ed2730e5cfdad8296db33 378 SUPERFAMILY SSF53383 23 370 6.05E-55 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_2882 a3c302fbe61ed2730e5cfdad8296db33 378 PIRSF PIRSF001434 1 374 2.2E-70 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_2882 a3c302fbe61ed2730e5cfdad8296db33 378 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 2 370 1.0E-46 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_2882 a3c302fbe61ed2730e5cfdad8296db33 378 Gene3D G3DSA:3.90.1150.10 242 372 2.9E-17 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_0526 a9ee573de41bf0d85287d058f611b2fd 300 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 14 300 30.488 T 14-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 TMO_0526 a9ee573de41bf0d85287d058f611b2fd 300 Pfam PF02649 Type I GTP cyclohydrolase folE2 14 297 9.6E-62 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 TMO_c0090 224c73a67c274f2716d44ddef0c4d26b 263 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 13 225 2.0E-88 T 14-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 TMO_c0090 224c73a67c274f2716d44ddef0c4d26b 263 Pfam PF08900 Domain of unknown function (DUF1845) 12 222 8.2E-79 T 14-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 TMO_1149 877e4e701e771163ba230bf73b9ccf6c 323 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 2 320 1.0E-78 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B TMO_1149 877e4e701e771163ba230bf73b9ccf6c 323 SUPERFAMILY SSF50891 178 303 3.03E-9 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily TMO_1149 877e4e701e771163ba230bf73b9ccf6c 323 Gene3D G3DSA:2.40.100.10 178 323 6.7E-39 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily TMO_1149 877e4e701e771163ba230bf73b9ccf6c 323 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 297 2.2E-83 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B TMO_1149 877e4e701e771163ba230bf73b9ccf6c 323 SMART SM00797 24 314 1.5E-122 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B TMO_1499 0c5316a74c70506517fe8c31d26d67c0 235 Gene3D G3DSA:3.40.30.10 7 231 2.8E-108 T 14-10-2018 TMO_1499 0c5316a74c70506517fe8c31d26d67c0 235 SUPERFAMILY SSF47616 102 231 3.34E-32 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_1499 0c5316a74c70506517fe8c31d26d67c0 235 Pfam PF02798 Glutathione S-transferase, N-terminal domain 22 99 1.3E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_1499 0c5316a74c70506517fe8c31d26d67c0 235 SUPERFAMILY SSF52833 11 102 1.47E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_1499 0c5316a74c70506517fe8c31d26d67c0 235 Gene3D G3DSA:1.20.1050.10 106 221 2.8E-108 T 14-10-2018 TMO_1499 0c5316a74c70506517fe8c31d26d67c0 235 Pfam PF00043 Glutathione S-transferase, C-terminal domain 145 222 4.3E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal TMO_0567 17a88e76f8dda445fe14a061f2b61bbb 143 SUPERFAMILY SSF82649 5 137 3.51E-44 T 14-10-2018 TMO_0567 17a88e76f8dda445fe14a061f2b61bbb 143 Pfam PF02657 Fe-S metabolism associated domain 10 132 1.1E-46 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like TMO_0567 17a88e76f8dda445fe14a061f2b61bbb 143 Gene3D G3DSA:3.90.1010.10 2 142 2.9E-51 T 14-10-2018 TMO_a0180 db4cb3f07c13618359c0d66260f41c63 280 Gene3D G3DSA:3.90.25.10 133 266 1.1E-57 T 14-10-2018 TMO_a0180 db4cb3f07c13618359c0d66260f41c63 280 SUPERFAMILY SSF51735 13 245 2.82E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0180 db4cb3f07c13618359c0d66260f41c63 280 Pfam PF13460 NAD(P)H-binding 17 181 8.8E-14 T 14-10-2018 IPR016040 NAD(P)-binding domain TMO_a0180 db4cb3f07c13618359c0d66260f41c63 280 Gene3D G3DSA:3.40.50.720 14 264 1.1E-57 T 14-10-2018 TMO_2982 6d3695dcca0b02515d94448f4c9f71ec 152 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 32 91 9.7E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2982 6d3695dcca0b02515d94448f4c9f71ec 152 SUPERFAMILY SSF46785 14 112 7.0E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2982 6d3695dcca0b02515d94448f4c9f71ec 152 Gene3D G3DSA:1.10.10.10 11 122 8.6E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1820 0d24ccad6c81180f7b9e3d2c1bfcfbc6 149 Gene3D G3DSA:3.40.50.960 1 148 1.3E-53 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_1820 0d24ccad6c81180f7b9e3d2c1bfcfbc6 149 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 10 141 2.1E-37 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_1820 0d24ccad6c81180f7b9e3d2c1bfcfbc6 149 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 9 143 4.1E-46 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_1820 0d24ccad6c81180f7b9e3d2c1bfcfbc6 149 SUPERFAMILY SSF52121 4 147 3.14E-51 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_1820 0d24ccad6c81180f7b9e3d2c1bfcfbc6 149 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 4 146 25.451 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_3111 d919e0d36c5a3e2c01bea757f2be3903 96 Gene3D G3DSA:1.10.10.1150 4 95 4.1E-28 T 14-10-2018 TMO_3111 d919e0d36c5a3e2c01bea757f2be3903 96 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 13 92 1.7E-20 T 14-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 TMO_3111 d919e0d36c5a3e2c01bea757f2be3903 96 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 30 93 6.6E-12 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D TMO_1668 3ee4d6c1e7780f204cfc08f4294d9cc9 463 SMART SM00267 283 450 3.0E-57 T 14-10-2018 IPR000160 GGDEF domain TMO_1668 3ee4d6c1e7780f204cfc08f4294d9cc9 463 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 239 1.8E-31 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_1668 3ee4d6c1e7780f204cfc08f4294d9cc9 463 SMART SM00062 31 252 8.3E-20 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_1668 3ee4d6c1e7780f204cfc08f4294d9cc9 463 SUPERFAMILY SSF55073 299 451 2.51E-43 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_1668 3ee4d6c1e7780f204cfc08f4294d9cc9 463 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 448 2.3E-42 T 14-10-2018 IPR000160 GGDEF domain TMO_1668 3ee4d6c1e7780f204cfc08f4294d9cc9 463 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 446 9.1E-41 T 14-10-2018 IPR000160 GGDEF domain TMO_1668 3ee4d6c1e7780f204cfc08f4294d9cc9 463 Gene3D G3DSA:3.30.70.270 280 450 4.5E-54 T 14-10-2018 TMO_1668 3ee4d6c1e7780f204cfc08f4294d9cc9 463 Gene3D G3DSA:3.40.190.10 116 211 6.9E-65 T 14-10-2018 TMO_1668 3ee4d6c1e7780f204cfc08f4294d9cc9 463 SUPERFAMILY SSF53850 25 251 1.69E-42 T 14-10-2018 TMO_1668 3ee4d6c1e7780f204cfc08f4294d9cc9 463 Gene3D G3DSA:3.40.190.10 22 247 6.9E-65 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 460 4.1E-39 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PIRSF PIRSF000350 1 467 1.1E-98 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 4.4E-42 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.4E-42 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 4.4E-42 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 4.4E-42 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 4.4E-42 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 SUPERFAMILY SSF51905 4 326 1.89E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3004 f7d635431a56c95dd243814460b3260b 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TMO_3004 f7d635431a56c95dd243814460b3260b 470 SUPERFAMILY SSF55424 347 469 1.89E-43 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_3004 f7d635431a56c95dd243814460b3260b 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 470 7.2E-178 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 312 319 5.5E-79 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 5.5E-79 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 5.5E-79 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 5.5E-79 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 5.5E-79 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 5.5E-79 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 5.5E-79 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 5.5E-79 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 347 368 5.5E-79 T 14-10-2018 TMO_3004 f7d635431a56c95dd243814460b3260b 470 Gene3D G3DSA:3.30.390.30 350 470 1.5E-46 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_3004 f7d635431a56c95dd243814460b3260b 470 Gene3D G3DSA:3.50.50.60 8 332 5.4E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3004 f7d635431a56c95dd243814460b3260b 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 332 2.0E-74 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_3004 f7d635431a56c95dd243814460b3260b 470 Gene3D G3DSA:3.50.50.60 152 275 5.4E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0162 31fd22eddeb0157f184dc45c4dfe7577 338 SUPERFAMILY SSF50129 3 161 4.25E-39 T 14-10-2018 IPR011032 GroES-like superfamily TMO_b0162 31fd22eddeb0157f184dc45c4dfe7577 338 SMART SM00829 3 336 0.0021 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_b0162 31fd22eddeb0157f184dc45c4dfe7577 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 112 6.9E-21 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_b0162 31fd22eddeb0157f184dc45c4dfe7577 338 Gene3D G3DSA:3.90.180.10 5 327 4.4E-87 T 14-10-2018 TMO_b0162 31fd22eddeb0157f184dc45c4dfe7577 338 SUPERFAMILY SSF51735 144 305 2.25E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0162 31fd22eddeb0157f184dc45c4dfe7577 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 TMO_b0162 31fd22eddeb0157f184dc45c4dfe7577 338 Gene3D G3DSA:3.40.50.720 153 300 4.4E-87 T 14-10-2018 TMO_b0162 31fd22eddeb0157f184dc45c4dfe7577 338 Pfam PF00107 Zinc-binding dehydrogenase 173 283 4.5E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_1578 9b8faa5c56d158798a8dd2811d3f9b8c 530 Gene3D G3DSA:3.40.605.10 34 523 1.0E-137 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_1578 9b8faa5c56d158798a8dd2811d3f9b8c 530 SUPERFAMILY SSF53720 53 525 1.18E-120 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_1578 9b8faa5c56d158798a8dd2811d3f9b8c 530 Pfam PF00171 Aldehyde dehydrogenase family 62 521 2.8E-121 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_1578 9b8faa5c56d158798a8dd2811d3f9b8c 530 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 318 329 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_1578 9b8faa5c56d158798a8dd2811d3f9b8c 530 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 290 297 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_1578 9b8faa5c56d158798a8dd2811d3f9b8c 530 Gene3D G3DSA:3.40.309.10 295 492 1.0E-137 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_1216 33d7b0bcf53c27981f3ff7209cd7e735 741 SUPERFAMILY SSF55073 573 729 5.49E-46 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_1216 33d7b0bcf53c27981f3ff7209cd7e735 741 Gene3D G3DSA:3.30.70.270 565 733 4.9E-54 T 14-10-2018 TMO_1216 33d7b0bcf53c27981f3ff7209cd7e735 741 Pfam PF00990 Diguanylate cyclase, GGDEF domain 570 726 5.3E-43 T 14-10-2018 IPR000160 GGDEF domain TMO_1216 33d7b0bcf53c27981f3ff7209cd7e735 741 Gene3D G3DSA:3.30.450.20 34 177 1.4E-19 T 14-10-2018 TMO_1216 33d7b0bcf53c27981f3ff7209cd7e735 741 Gene3D G3DSA:3.30.450.40 402 564 1.8E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_1216 33d7b0bcf53c27981f3ff7209cd7e735 741 Gene3D G3DSA:1.20.1480.50 280 375 1.2E-5 T 14-10-2018 TMO_1216 33d7b0bcf53c27981f3ff7209cd7e735 741 SUPERFAMILY SSF55781 428 565 2.44E-7 T 14-10-2018 TMO_1216 33d7b0bcf53c27981f3ff7209cd7e735 741 SMART SM00304 312 365 3.7E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_1216 33d7b0bcf53c27981f3ff7209cd7e735 741 SMART SM00267 557 730 2.4E-53 T 14-10-2018 IPR000160 GGDEF domain TMO_1216 33d7b0bcf53c27981f3ff7209cd7e735 741 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 566 729 1.8E-50 T 14-10-2018 IPR000160 GGDEF domain TMO_1216 33d7b0bcf53c27981f3ff7209cd7e735 741 SUPERFAMILY SSF158472 314 362 9.29E-5 T 14-10-2018 TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 SUPERFAMILY SSF52540 532 709 5.22E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 11 1037 17.574 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 Gene3D G3DSA:2.40.30.10 941 1037 3.8E-35 T 14-10-2018 TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 Pfam PF11987 Translation-initiation factor 2 825 929 4.9E-35 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 19 56 1.2E-9 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 Gene3D G3DSA:2.40.30.10 709 824 4.9E-41 T 14-10-2018 TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 540 696 2.1E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 SUPERFAMILY SSF52156 825 946 6.41E-33 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 SUPERFAMILY SSF50447 941 1035 4.32E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 Gene3D G3DSA:3.40.50.300 533 708 4.8E-71 T 14-10-2018 TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 ProSitePatterns PS01176 Initiation factor 2 signature. 990 1012 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 SUPERFAMILY SSF50447 710 793 1.46E-26 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 Gene3D G3DSA:3.40.50.10050 834 939 2.9E-36 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 Pfam PF00009 Elongation factor Tu GTP binding domain 541 698 8.0E-33 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 455 1036 2.6E-252 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TMO_3542 d8929e580ac7026562ec8c1d00b2493c 1043 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 461 510 1.3E-15 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal TMO_0622 b7d524b53cb0b02aa52129b039229634 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0622 b7d524b53cb0b02aa52129b039229634 549 SUPERFAMILY SSF56801 15 545 6.28E-152 T 14-10-2018 TMO_0622 b7d524b53cb0b02aa52129b039229634 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 534 4.9E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0622 b7d524b53cb0b02aa52129b039229634 549 Pfam PF00501 AMP-binding enzyme 37 446 1.9E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0622 b7d524b53cb0b02aa52129b039229634 549 Gene3D G3DSA:3.30.300.30 444 547 2.7E-30 T 14-10-2018 TMO_0622 b7d524b53cb0b02aa52129b039229634 549 Gene3D G3DSA:3.40.50.12780 17 443 1.5E-120 T 14-10-2018 TMO_a0449 e23b33c28bd0c5026b4c136df8dfd52c 150 SUPERFAMILY SSF56209 30 108 5.49E-7 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_c0393 b99ad0b32227466bcd88830491c7fc25 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 23 400 9.2E-115 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_c0393 b99ad0b32227466bcd88830491c7fc25 401 PIRSF PIRSF001434 8 401 1.6E-126 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_c0393 b99ad0b32227466bcd88830491c7fc25 401 Gene3D G3DSA:3.90.1150.10 269 401 3.0E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0393 b99ad0b32227466bcd88830491c7fc25 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 210 224 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_c0393 b99ad0b32227466bcd88830491c7fc25 401 Gene3D G3DSA:3.40.640.10 17 267 5.6E-84 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0393 b99ad0b32227466bcd88830491c7fc25 401 SUPERFAMILY SSF53383 36 400 3.09E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_1489 d0c9e2517a7988d3aba72190b429ec63 394 Gene3D G3DSA:1.20.1250.20 25 202 4.3E-17 T 14-10-2018 TMO_1489 d0c9e2517a7988d3aba72190b429ec63 394 Gene3D G3DSA:1.20.1250.20 214 392 3.2E-13 T 14-10-2018 TMO_1489 d0c9e2517a7988d3aba72190b429ec63 394 SUPERFAMILY SSF103473 24 389 1.96E-39 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_1489 d0c9e2517a7988d3aba72190b429ec63 394 Pfam PF07690 Major Facilitator Superfamily 222 386 3.6E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_1489 d0c9e2517a7988d3aba72190b429ec63 394 Pfam PF07690 Major Facilitator Superfamily 29 193 8.5E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_1329 5c4341c2004e500554b1758b3d845947 163 SUPERFAMILY SSF54909 64 145 5.63E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_1329 5c4341c2004e500554b1758b3d845947 163 Pfam PF01037 Lrp/AsnC ligand binding domain 78 138 3.2E-15 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_1329 5c4341c2004e500554b1758b3d845947 163 Pfam PF13404 AsnC-type helix-turn-helix domain 2 42 3.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_1329 5c4341c2004e500554b1758b3d845947 163 Gene3D G3DSA:1.10.10.10 3 54 5.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1329 5c4341c2004e500554b1758b3d845947 163 SUPERFAMILY SSF46785 1 61 1.04E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1329 5c4341c2004e500554b1758b3d845947 163 Gene3D G3DSA:3.30.70.920 55 135 1.5E-19 T 14-10-2018 TMO_1329 5c4341c2004e500554b1758b3d845947 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 8.5E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_1329 5c4341c2004e500554b1758b3d845947 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 8.5E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_1329 5c4341c2004e500554b1758b3d845947 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 8.5E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_1329 5c4341c2004e500554b1758b3d845947 163 SMART SM00344 2 109 5.0E-35 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_c0405 1b5335abb05575aab99384fea0bdb70a 513 Gene3D G3DSA:3.40.50.300 9 248 2.6E-54 T 14-10-2018 TMO_c0405 1b5335abb05575aab99384fea0bdb70a 513 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0405 1b5335abb05575aab99384fea0bdb70a 513 Pfam PF00005 ABC transporter 32 179 1.2E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0405 1b5335abb05575aab99384fea0bdb70a 513 SUPERFAMILY SSF52540 16 237 6.03E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0405 1b5335abb05575aab99384fea0bdb70a 513 Gene3D G3DSA:3.40.50.300 267 494 1.2E-33 T 14-10-2018 TMO_c0405 1b5335abb05575aab99384fea0bdb70a 513 SUPERFAMILY SSF52540 267 489 3.2E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0405 1b5335abb05575aab99384fea0bdb70a 513 Pfam PF00005 ABC transporter 283 422 6.3E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0405 1b5335abb05575aab99384fea0bdb70a 513 SMART SM00382 40 227 6.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0405 1b5335abb05575aab99384fea0bdb70a 513 SMART SM00382 292 485 11.0 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2127 82d4d6791ca105a8415b9dbca4eff89e 186 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 42 173 3.7E-16 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_a0111 d18790ee2798f41a9b1618d0f68c95f0 396 Gene3D G3DSA:1.20.1250.20 16 203 2.8E-21 T 14-10-2018 TMO_a0111 d18790ee2798f41a9b1618d0f68c95f0 396 Gene3D G3DSA:1.20.1250.20 210 390 2.8E-11 T 14-10-2018 TMO_a0111 d18790ee2798f41a9b1618d0f68c95f0 396 SUPERFAMILY SSF103473 8 388 3.53E-45 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_a0111 d18790ee2798f41a9b1618d0f68c95f0 396 Pfam PF07690 Major Facilitator Superfamily 21 355 1.4E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_2348 ac482f5af22a45eee9e552af05b520e4 421 TIGRFAM TIGR01224 hutI: imidazolonepropionase 31 405 7.4E-144 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2348 ac482f5af22a45eee9e552af05b520e4 421 SUPERFAMILY SSF51556 71 368 5.39E-90 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_2348 ac482f5af22a45eee9e552af05b520e4 421 Gene3D G3DSA:2.30.40.10 14 406 2.6E-165 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2348 ac482f5af22a45eee9e552af05b520e4 421 SUPERFAMILY SSF51338 7 406 2.07E-31 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2348 ac482f5af22a45eee9e552af05b520e4 421 Pfam PF01979 Amidohydrolase family 69 391 2.7E-20 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_2348 ac482f5af22a45eee9e552af05b520e4 421 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 409 43.898 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2348 ac482f5af22a45eee9e552af05b520e4 421 Gene3D G3DSA:3.20.20.140 72 369 2.6E-165 T 14-10-2018 TMO_c0701 8568a40aa7ff5a094416256ceb2eb6ac 321 Pfam PF00472 RF-1 domain 173 282 1.3E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TMO_c0701 8568a40aa7ff5a094416256ceb2eb6ac 321 SUPERFAMILY SSF75620 1 309 4.97E-122 T 14-10-2018 TMO_c0701 8568a40aa7ff5a094416256ceb2eb6ac 321 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 3 310 33.927 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 TMO_c0701 8568a40aa7ff5a094416256ceb2eb6ac 321 Gene3D G3DSA:3.30.160.20 170 265 8.2E-98 T 14-10-2018 TMO_c0701 8568a40aa7ff5a094416256ceb2eb6ac 321 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 309 2.3E-145 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 TMO_c0701 8568a40aa7ff5a094416256ceb2eb6ac 321 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 189 205 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TMO_c0701 8568a40aa7ff5a094416256ceb2eb6ac 321 Gene3D G3DSA:3.30.70.1660 74 302 8.2E-98 T 14-10-2018 TMO_c0701 8568a40aa7ff5a094416256ceb2eb6ac 321 Pfam PF03462 PCRF domain 1 164 2.3E-50 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 TMO_c0701 8568a40aa7ff5a094416256ceb2eb6ac 321 SMART SM00937 29 139 2.9E-52 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 TMO_c0701 8568a40aa7ff5a094416256ceb2eb6ac 321 Gene3D G3DSA:1.20.58.410 1 60 1.9E-7 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 SUPERFAMILY SSF82714 182 264 1.57E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 Gene3D G3DSA:3.30.70.1430 40 795 0.0 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 SUPERFAMILY SSF82866 786 1010 2.09E-49 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 Gene3D G3DSA:1.20.1640.10 10 500 0.0 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 SUPERFAMILY SSF82693 135 323 1.33E-27 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 SUPERFAMILY SSF82693 553 649 8.89E-19 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 Gene3D G3DSA:3.30.70.1320 134 325 0.0 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 SUPERFAMILY SSF82693 40 134 1.65E-27 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 Gene3D G3DSA:3.30.70.1430 555 648 0.0 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 Pfam PF00873 AcrB/AcrD/AcrF family 4 1004 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 Gene3D G3DSA:3.30.70.1440 649 844 0.0 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 SUPERFAMILY SSF82714 700 785 1.44E-19 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 Gene3D G3DSA:3.30.2090.10 699 787 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 Gene3D G3DSA:1.20.1640.10 501 1001 0.0 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 SUPERFAMILY SSF82866 290 489 2.75E-50 T 14-10-2018 TMO_c0591 59b7369b7dde564ef95ca0f7d4411ed0 1032 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_1375 6b49e96f87de027c3b9eb59eff665756 282 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 2 72 6.5E-20 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 TMO_3311 c2f9d9ca1a86ac1f0546f9aeb81d8b44 299 Gene3D G3DSA:3.40.190.10 94 188 7.6E-17 T 14-10-2018 TMO_3311 c2f9d9ca1a86ac1f0546f9aeb81d8b44 299 Gene3D G3DSA:1.10.10.10 11 93 2.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3311 c2f9d9ca1a86ac1f0546f9aeb81d8b44 299 SUPERFAMILY SSF46785 8 124 1.23E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3311 c2f9d9ca1a86ac1f0546f9aeb81d8b44 299 Pfam PF03466 LysR substrate binding domain 106 296 7.4E-32 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_3311 c2f9d9ca1a86ac1f0546f9aeb81d8b44 299 Gene3D G3DSA:3.40.190.10 189 270 1.4E-12 T 14-10-2018 TMO_3311 c2f9d9ca1a86ac1f0546f9aeb81d8b44 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 1.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3311 c2f9d9ca1a86ac1f0546f9aeb81d8b44 299 SUPERFAMILY SSF53850 105 294 1.12E-28 T 14-10-2018 TMO_0596 ac8f94ff778e77316b50969f98a5d6a3 182 Gene3D G3DSA:3.40.50.1820 2 182 2.7E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0596 ac8f94ff778e77316b50969f98a5d6a3 182 Pfam PF06821 Serine hydrolase 6 176 2.8E-64 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 TMO_0596 ac8f94ff778e77316b50969f98a5d6a3 182 SUPERFAMILY SSF53474 4 175 9.6E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3514 a2d513a6887ef7d5cdd8c403f57186c6 260 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 39 259 1.0E-76 T 14-10-2018 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane TMO_2989 c1ffa2086c7fa22c9c909bfac9b801c0 734 SMART SM00490 498 595 5.8E-6 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_2989 c1ffa2086c7fa22c9c909bfac9b801c0 734 Pfam PF00270 DEAD/DEAH box helicase 222 364 1.1E-11 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_2989 c1ffa2086c7fa22c9c909bfac9b801c0 734 Gene3D G3DSA:1.10.8.630 15 108 1.0E-15 T 14-10-2018 TMO_2989 c1ffa2086c7fa22c9c909bfac9b801c0 734 Pfam PF00271 Helicase conserved C-terminal domain 511 594 1.1E-5 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_2989 c1ffa2086c7fa22c9c909bfac9b801c0 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 1.5E-184 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TMO_2989 c1ffa2086c7fa22c9c909bfac9b801c0 734 Gene3D G3DSA:3.40.50.300 195 378 4.6E-67 T 14-10-2018 TMO_2989 c1ffa2086c7fa22c9c909bfac9b801c0 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 733 22.957 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TMO_2989 c1ffa2086c7fa22c9c909bfac9b801c0 734 SUPERFAMILY SSF52540 199 372 1.28E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2989 c1ffa2086c7fa22c9c909bfac9b801c0 734 SUPERFAMILY SSF52540 223 616 1.49E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2989 c1ffa2086c7fa22c9c909bfac9b801c0 734 SMART SM00487 194 392 4.3E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 23 690 6.4E-237 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 SUPERFAMILY SSF47781 416 606 3.3E-49 T 14-10-2018 IPR010994 RuvA domain 2-like TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 SUPERFAMILY SSF50249 329 413 6.85E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Gene3D G3DSA:1.10.150.20 525 612 8.9E-21 T 14-10-2018 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 420 446 4.5E-11 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 129 158 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 334 410 6.5E-36 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Gene3D G3DSA:1.10.150.20 444 523 1.6E-25 T 14-10-2018 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Gene3D G3DSA:1.10.287.610 12 82 3.3E-24 T 14-10-2018 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 343 358 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Gene3D G3DSA:2.40.50.140 330 402 2.9E-35 T 14-10-2018 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Gene3D G3DSA:3.40.50.10190 618 697 5.5E-23 T 14-10-2018 IPR036420 BRCT domain superfamily TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Gene3D G3DSA:2.20.70.80 403 443 3.9E-17 T 14-10-2018 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 SMART SM00278 530 549 640.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 SMART SM00278 572 591 2.2 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 SMART SM00278 458 477 330.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 SMART SM00278 498 517 2500.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 SMART SM00532 15 460 2.5E-258 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 SUPERFAMILY SSF52113 622 692 5.05E-16 T 14-10-2018 IPR036420 BRCT domain superfamily TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 15 330 9.8E-118 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 PIRSF PIRSF001604 8 698 1.7E-230 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 SMART SM00292 620 697 3.5E-8 T 14-10-2018 IPR001357 BRCT domain TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 623 692 1.0E-9 T 14-10-2018 IPR001357 BRCT domain TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Gene3D G3DSA:3.30.470.90 83 329 4.9E-95 T 14-10-2018 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Pfam PF12826 Helix-hairpin-helix motif 528 601 4.9E-14 T 14-10-2018 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 Hamap MF_01588 DNA ligase [ligA]. 14 694 49.699 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TMO_c0230 07f76b6e7b2aa8786b11a3e3296b4c36 703 SUPERFAMILY SSF56091 12 328 6.88E-114 T 14-10-2018 TMO_c0777 33221adc4566d81809bc185791952f24 671 SUPERFAMILY SSF56014 527 666 3.01E-37 T 14-10-2018 TMO_c0777 33221adc4566d81809bc185791952f24 671 Gene3D G3DSA:3.30.413.10 527 670 6.0E-31 T 14-10-2018 TMO_c0777 33221adc4566d81809bc185791952f24 671 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 448 516 2.8E-12 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_c0777 33221adc4566d81809bc185791952f24 671 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 169 229 1.4E-16 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_c0777 33221adc4566d81809bc185791952f24 671 Pfam PF11011 Protein of unknown function (DUF2849) 5 90 8.5E-23 T 14-10-2018 IPR021270 Protein of unknown function DUF2849 TMO_c0777 33221adc4566d81809bc185791952f24 671 SUPERFAMILY SSF55124 135 242 7.36E-28 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_c0777 33221adc4566d81809bc185791952f24 671 SUPERFAMILY SSF55124 371 540 7.69E-24 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_c0777 33221adc4566d81809bc185791952f24 671 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 531 666 2.8E-9 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_c0777 33221adc4566d81809bc185791952f24 671 SUPERFAMILY SSF56014 239 392 1.57E-45 T 14-10-2018 TMO_c0777 33221adc4566d81809bc185791952f24 671 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 238 391 5.3E-40 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TMO_b0310 aa1db4cabc7a6ebfa7dcf2e4054ddfb3 325 PIRSF PIRSF018266 3 325 3.7E-68 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_b0310 aa1db4cabc7a6ebfa7dcf2e4054ddfb3 325 Pfam PF16220 Domain of unknown function (DUF4880) 16 55 1.5E-12 T 14-10-2018 IPR032623 FecR, N-terminal TMO_b0310 aa1db4cabc7a6ebfa7dcf2e4054ddfb3 325 Gene3D G3DSA:2.60.120.1440 107 241 6.2E-10 T 14-10-2018 TMO_b0310 aa1db4cabc7a6ebfa7dcf2e4054ddfb3 325 Pfam PF04773 FecR protein 115 214 2.2E-11 T 14-10-2018 IPR006860 FecR protein TMO_a0591 7ef92da46c9daa29d60f422cac8099cc 301 Gene3D G3DSA:3.40.190.10 165 265 3.9E-65 T 14-10-2018 TMO_a0591 7ef92da46c9daa29d60f422cac8099cc 301 Gene3D G3DSA:1.10.10.10 4 88 4.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0591 7ef92da46c9daa29d60f422cac8099cc 301 SUPERFAMILY SSF53850 92 297 4.52E-44 T 14-10-2018 TMO_a0591 7ef92da46c9daa29d60f422cac8099cc 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 1.8E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0591 7ef92da46c9daa29d60f422cac8099cc 301 Gene3D G3DSA:3.40.190.10 93 289 3.9E-65 T 14-10-2018 TMO_a0591 7ef92da46c9daa29d60f422cac8099cc 301 Pfam PF03466 LysR substrate binding domain 92 293 8.3E-43 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_a0591 7ef92da46c9daa29d60f422cac8099cc 301 SUPERFAMILY SSF46785 9 114 3.89E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0433 59a350abe0b5c22585db0451742648c1 192 Pfam PF02464 Competence-damaged protein 38 184 3.5E-44 T 14-10-2018 IPR008136 CinA, C-terminal TMO_a0433 59a350abe0b5c22585db0451742648c1 192 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 42 182 5.5E-33 T 14-10-2018 IPR008136 CinA, C-terminal TMO_a0433 59a350abe0b5c22585db0451742648c1 192 Gene3D G3DSA:3.90.950.20 25 189 3.5E-49 T 14-10-2018 IPR036653 CinA-like, C-terminal TMO_a0433 59a350abe0b5c22585db0451742648c1 192 SUPERFAMILY SSF142433 30 186 1.57E-44 T 14-10-2018 IPR036653 CinA-like, C-terminal TMO_2133 55d02a3345353a1b2f8a0ac001bb9471 238 Gene3D G3DSA:3.40.50.300 5 238 3.7E-56 T 14-10-2018 TMO_2133 55d02a3345353a1b2f8a0ac001bb9471 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2133 55d02a3345353a1b2f8a0ac001bb9471 238 SUPERFAMILY SSF52540 8 231 5.86E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2133 55d02a3345353a1b2f8a0ac001bb9471 238 SMART SM00382 34 215 2.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2133 55d02a3345353a1b2f8a0ac001bb9471 238 Pfam PF00005 ABC transporter 25 166 9.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 SMART SM00998 349 429 1.3E-41 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 SUPERFAMILY SSF48557 3 429 2.36E-135 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 429 1.3E-156 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 Gene3D G3DSA:1.20.200.10 93 347 5.9E-92 T 14-10-2018 TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 9.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 9.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 9.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 9.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 Pfam PF00206 Lyase 8 286 8.4E-54 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 2.0E-27 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 Gene3D G3DSA:1.10.40.30 350 430 1.2E-28 T 14-10-2018 TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 Gene3D G3DSA:1.10.275.10 1 92 3.0E-34 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 1.2E-6 T 14-10-2018 TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.2E-6 T 14-10-2018 TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.2E-6 T 14-10-2018 TMO_2252 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.2E-6 T 14-10-2018 TMO_2341 dbe04bbd729f0ad43cc558a748791ed9 347 SUPERFAMILY SSF55821 19 217 1.01E-57 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TMO_2341 dbe04bbd729f0ad43cc558a748791ed9 347 Pfam PF03481 Putative GTP-binding controlling metal-binding 209 344 3.1E-13 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain TMO_2341 dbe04bbd729f0ad43cc558a748791ed9 347 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 19 214 2.0E-51 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 TMO_2341 dbe04bbd729f0ad43cc558a748791ed9 347 PIRSF PIRSF004930 6 347 2.6E-88 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 TMO_2341 dbe04bbd729f0ad43cc558a748791ed9 347 Pfam PF01300 Telomere recombination 33 206 3.1E-49 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 TMO_2341 dbe04bbd729f0ad43cc558a748791ed9 347 Gene3D G3DSA:3.90.870.10 9 220 9.3E-72 T 14-10-2018 TMO_a0068 e247541e2f76a27373a81a52e92e0608 909 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 27 530 1.9E-163 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset TMO_a0068 e247541e2f76a27373a81a52e92e0608 909 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 38 523 8.2E-123 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein TMO_a0068 e247541e2f76a27373a81a52e92e0608 909 Gene3D G3DSA:2.30.110.50 29 352 4.9E-94 T 14-10-2018 TMO_a0068 e247541e2f76a27373a81a52e92e0608 909 SUPERFAMILY SSF69349 461 536 7.53E-18 T 14-10-2018 TMO_a0068 e247541e2f76a27373a81a52e92e0608 909 SUPERFAMILY SSF69255 383 471 2.88E-33 T 14-10-2018 TMO_a0068 e247541e2f76a27373a81a52e92e0608 909 SUPERFAMILY SSF69279 222 383 1.0E-26 T 14-10-2018 TMO_a0068 e247541e2f76a27373a81a52e92e0608 909 Gene3D G3DSA:3.30.1920.30 241 304 4.9E-94 T 14-10-2018 TMO_a0068 e247541e2f76a27373a81a52e92e0608 909 Pfam PF05954 Phage late control gene D protein (GPD) 45 348 5.6E-82 T 14-10-2018 TMO_a0068 e247541e2f76a27373a81a52e92e0608 909 SUPERFAMILY SSF69279 26 206 1.06E-50 T 14-10-2018 TMO_a0068 e247541e2f76a27373a81a52e92e0608 909 Gene3D G3DSA:2.40.50.230 375 476 1.8E-43 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily TMO_a0068 e247541e2f76a27373a81a52e92e0608 909 Gene3D G3DSA:3.55.50.10 118 210 4.9E-94 T 14-10-2018 TMO_2558 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2558 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 4.5E-25 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2558 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 53 14.531 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2558 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 Gene3D G3DSA:2.20.28.120 1 55 6.9E-28 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2558 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 Pfam PF00471 Ribosomal protein L33 7 53 4.8E-18 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2558 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 SUPERFAMILY SSF57829 2 53 3.24E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 TMO_2464 e039fd65c9e992ab3303c46ef6a15398 183 PIRSF PIRSF024492 20 174 8.2E-27 T 14-10-2018 IPR014519 Uncharacterised conserved protein UCP024492 TMO_2464 e039fd65c9e992ab3303c46ef6a15398 183 Pfam PF04343 Protein of unknown function, DUF488 34 138 1.1E-15 T 14-10-2018 IPR007438 Protein of unknown function DUF488 TMO_0893 b08c649fefca8098dcb8d8034436c65e 116 Gene3D G3DSA:1.10.20.30 1 44 4.4E-5 T 14-10-2018 TMO_0893 b08c649fefca8098dcb8d8034436c65e 116 SUPERFAMILY SSF102829 4 87 3.4E-15 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily TMO_0893 b08c649fefca8098dcb8d8034436c65e 116 Pfam PF05164 Cell division protein ZapA 4 106 3.3E-15 T 14-10-2018 IPR007838 Cell division protein ZapA-like TMO_c0330 17a96be5430e4d2309b65a9defa33cd7 286 SUPERFAMILY SSF51658 49 221 5.47E-5 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily TMO_c0330 17a96be5430e4d2309b65a9defa33cd7 286 Pfam PF05114 Protein of unknown function (DUF692) 8 278 5.9E-87 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 TMO_c0330 17a96be5430e4d2309b65a9defa33cd7 286 Gene3D G3DSA:3.20.20.150 4 284 1.0E-79 T 14-10-2018 TMO_1534 b9c80b20e7104ae34c35f71934323f5a 575 SUPERFAMILY SSF161098 29 291 3.36E-43 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1534 b9c80b20e7104ae34c35f71934323f5a 575 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 283 1.4E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1534 b9c80b20e7104ae34c35f71934323f5a 575 SUPERFAMILY SSF161098 312 564 1.31E-27 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1534 b9c80b20e7104ae34c35f71934323f5a 575 Gene3D G3DSA:1.10.3720.10 36 295 1.9E-50 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1534 b9c80b20e7104ae34c35f71934323f5a 575 Gene3D G3DSA:1.10.3720.10 315 571 2.4E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0029 1a0338b3f658e56337d9612873636bfd 253 Gene3D G3DSA:3.40.50.2300 20 149 1.0E-34 T 14-10-2018 TMO_a0029 1a0338b3f658e56337d9612873636bfd 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 178 249 2.2E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_a0029 1a0338b3f658e56337d9612873636bfd 253 SUPERFAMILY SSF52172 22 151 6.4E-39 T 14-10-2018 IPR011006 CheY-like superfamily TMO_a0029 1a0338b3f658e56337d9612873636bfd 253 Pfam PF00072 Response regulator receiver domain 29 137 3.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0029 1a0338b3f658e56337d9612873636bfd 253 SMART SM00862 175 249 2.3E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_a0029 1a0338b3f658e56337d9612873636bfd 253 Gene3D G3DSA:1.10.10.10 150 253 3.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0029 1a0338b3f658e56337d9612873636bfd 253 SMART SM00448 27 137 1.3E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0029 1a0338b3f658e56337d9612873636bfd 253 SUPERFAMILY SSF46894 153 250 3.97E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_c0625 a730041c98e10a1d54b898c4f60c35ab 391 Pfam PF06481 COX Aromatic Rich Motif 241 286 1.3E-17 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 TMO_c0625 a730041c98e10a1d54b898c4f60c35ab 391 Gene3D G3DSA:1.10.287.90 22 106 2.7E-32 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0625 a730041c98e10a1d54b898c4f60c35ab 391 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 8 240 4.7E-109 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 TMO_c0625 a730041c98e10a1d54b898c4f60c35ab 391 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 154 222 4.6E-7 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0625 a730041c98e10a1d54b898c4f60c35ab 391 SUPERFAMILY SSF81464 22 111 2.78E-22 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0625 a730041c98e10a1d54b898c4f60c35ab 391 Gene3D G3DSA:2.60.40.420 107 283 1.5E-50 T 14-10-2018 IPR008972 Cupredoxin TMO_c0625 a730041c98e10a1d54b898c4f60c35ab 391 SUPERFAMILY SSF49503 126 282 3.33E-48 T 14-10-2018 IPR008972 Cupredoxin TMO_1312 bf4b01558c850a51a63931d1b1ff8d82 735 Gene3D G3DSA:2.170.130.10 66 176 6.2E-25 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_1312 bf4b01558c850a51a63931d1b1ff8d82 735 Pfam PF00593 TonB dependent receptor 310 732 1.1E-29 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_1312 bf4b01558c850a51a63931d1b1ff8d82 735 Gene3D G3DSA:2.40.170.20 183 735 3.8E-52 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_1312 bf4b01558c850a51a63931d1b1ff8d82 735 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 167 1.1E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_1312 bf4b01558c850a51a63931d1b1ff8d82 735 SUPERFAMILY SSF56935 68 735 8.43E-75 T 14-10-2018 TMO_2337 4124971767da8f4789451904df065d9f 274 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 19 263 1.0E-79 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 TMO_2337 4124971767da8f4789451904df065d9f 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 221 245 9.8E-12 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2337 4124971767da8f4789451904df065d9f 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 50 70 9.8E-12 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2337 4124971767da8f4789451904df065d9f 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 72 88 9.8E-12 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2337 4124971767da8f4789451904df065d9f 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 97 113 9.8E-12 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2337 4124971767da8f4789451904df065d9f 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 189 210 9.8E-12 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2337 4124971767da8f4789451904df065d9f 274 Gene3D G3DSA:3.40.190.80 166 265 6.9E-32 T 14-10-2018 TMO_2337 4124971767da8f4789451904df065d9f 274 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 97 110 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site TMO_2337 4124971767da8f4789451904df065d9f 274 Pfam PF00459 Inositol monophosphatase family 20 255 3.1E-46 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2337 4124971767da8f4789451904df065d9f 274 Gene3D G3DSA:3.30.540.10 17 160 6.3E-36 T 14-10-2018 TMO_2337 4124971767da8f4789451904df065d9f 274 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 18 265 39.676 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 TMO_2337 4124971767da8f4789451904df065d9f 274 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 224 238 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 TMO_2337 4124971767da8f4789451904df065d9f 274 SUPERFAMILY SSF56655 19 262 2.09E-67 T 14-10-2018 TMO_b0219 2194c6378671d47876a96ba0bf4a1d60 666 Gene3D G3DSA:1.10.3470.10 350 664 1.3E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_b0219 2194c6378671d47876a96ba0bf4a1d60 666 Pfam PF01032 FecCD transport family 381 659 6.0E-64 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_b0219 2194c6378671d47876a96ba0bf4a1d60 666 Pfam PF01032 FecCD transport family 41 321 8.1E-58 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_b0219 2194c6378671d47876a96ba0bf4a1d60 666 SUPERFAMILY SSF81345 351 660 3.66E-59 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_b0219 2194c6378671d47876a96ba0bf4a1d60 666 Gene3D G3DSA:1.10.3470.10 4 324 3.6E-62 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_b0219 2194c6378671d47876a96ba0bf4a1d60 666 SUPERFAMILY SSF81345 9 322 7.72E-51 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_2523 a372f62b34192c79135ad9eb920f0d2f 1010 Gene3D G3DSA:3.40.50.300 323 468 5.6E-16 T 14-10-2018 TMO_2523 a372f62b34192c79135ad9eb920f0d2f 1010 Pfam PF13604 AAA domain 337 399 1.2E-6 T 14-10-2018 TMO_2523 a372f62b34192c79135ad9eb920f0d2f 1010 SUPERFAMILY SSF52540 332 414 1.35E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2523 a372f62b34192c79135ad9eb920f0d2f 1010 Pfam PF13195 Protein of unknown function (DUF4011) 39 221 4.1E-44 T 14-10-2018 IPR025103 Protein of unknown function DUF4011 TMO_1241 82c98f9afc45197dd5f27e582405947b 509 Gene3D G3DSA:1.10.8.60 291 367 1.3E-23 T 14-10-2018 TMO_1241 82c98f9afc45197dd5f27e582405947b 509 Gene3D G3DSA:1.10.10.60 427 487 2.2E-13 T 14-10-2018 TMO_1241 82c98f9afc45197dd5f27e582405947b 509 SUPERFAMILY SSF52172 22 164 3.47E-14 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1241 82c98f9afc45197dd5f27e582405947b 509 Pfam PF00158 Sigma-54 interaction domain 121 286 1.2E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_1241 82c98f9afc45197dd5f27e582405947b 509 SUPERFAMILY SSF46689 429 486 1.86E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1241 82c98f9afc45197dd5f27e582405947b 509 Gene3D G3DSA:3.40.50.300 113 290 2.4E-68 T 14-10-2018 TMO_1241 82c98f9afc45197dd5f27e582405947b 509 SMART SM00382 140 283 1.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1241 82c98f9afc45197dd5f27e582405947b 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 206 221 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_1241 82c98f9afc45197dd5f27e582405947b 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 452 469 4.9E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_1241 82c98f9afc45197dd5f27e582405947b 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 469 489 4.9E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_1241 82c98f9afc45197dd5f27e582405947b 509 Gene3D G3DSA:3.40.50.2300 12 112 4.3E-6 T 14-10-2018 TMO_1241 82c98f9afc45197dd5f27e582405947b 509 SUPERFAMILY SSF52540 120 361 1.39E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1241 82c98f9afc45197dd5f27e582405947b 509 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 333 342 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_1241 82c98f9afc45197dd5f27e582405947b 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 144 157 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_1241 82c98f9afc45197dd5f27e582405947b 509 Pfam PF02954 Bacterial regulatory protein, Fis family 446 484 1.7E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_2731 f3f81a739fd700d9e9101090ea5b1223 367 Pfam PF09084 NMT1/THI5 like 88 263 2.7E-20 T 14-10-2018 IPR015168 SsuA/THI5-like TMO_2731 f3f81a739fd700d9e9101090ea5b1223 367 SUPERFAMILY SSF53850 52 274 1.62E-35 T 14-10-2018 TMO_2731 f3f81a739fd700d9e9101090ea5b1223 367 Gene3D G3DSA:3.40.190.10 37 347 2.1E-117 T 14-10-2018 TMO_2731 f3f81a739fd700d9e9101090ea5b1223 367 Gene3D G3DSA:3.40.190.10 128 230 2.1E-117 T 14-10-2018 TMO_3077 7c3fcec43605018a324eda182200fe68 220 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3077 7c3fcec43605018a324eda182200fe68 220 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 13 208 3.5E-65 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 TMO_3077 7c3fcec43605018a324eda182200fe68 220 SMART SM00382 37 217 2.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3077 7c3fcec43605018a324eda182200fe68 220 Gene3D G3DSA:3.40.50.300 12 217 1.1E-41 T 14-10-2018 TMO_3077 7c3fcec43605018a324eda182200fe68 220 Pfam PF00005 ABC transporter 32 171 1.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3077 7c3fcec43605018a324eda182200fe68 220 SUPERFAMILY SSF52540 12 201 3.38E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0160 f86687d4bef1bd87faa0249786a754ec 393 Gene3D G3DSA:1.20.1290.10 5 128 6.5E-33 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_b0160 f86687d4bef1bd87faa0249786a754ec 393 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 116 9.5E-22 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_b0160 f86687d4bef1bd87faa0249786a754ec 393 Pfam PF02627 Carboxymuconolactone decarboxylase family 162 245 4.8E-21 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_b0160 f86687d4bef1bd87faa0249786a754ec 393 Gene3D G3DSA:2.60.120.10 263 390 1.3E-41 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_b0160 f86687d4bef1bd87faa0249786a754ec 393 SUPERFAMILY SSF69118 32 251 4.85E-56 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_b0160 f86687d4bef1bd87faa0249786a754ec 393 SUPERFAMILY SSF51182 274 390 1.65E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_b0160 f86687d4bef1bd87faa0249786a754ec 393 Gene3D G3DSA:1.20.1290.10 139 255 2.3E-28 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_b0160 f86687d4bef1bd87faa0249786a754ec 393 Pfam PF07883 Cupin domain 302 364 1.3E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_2857 17b936c7c8f70e406e02749a45697ba2 143 SUPERFAMILY SSF47413 5 68 8.04E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_2857 17b936c7c8f70e406e02749a45697ba2 143 Pfam PF13560 Helix-turn-helix domain 8 59 2.9E-11 T 14-10-2018 TMO_2857 17b936c7c8f70e406e02749a45697ba2 143 SMART SM00530 8 63 1.2E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_2857 17b936c7c8f70e406e02749a45697ba2 143 Gene3D G3DSA:1.10.260.40 6 69 6.0E-16 T 14-10-2018 TMO_a0015 27dea0222539d1ba78f52cdc6921a247 501 Gene3D G3DSA:2.30.40.10 5 63 3.0E-5 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_a0015 27dea0222539d1ba78f52cdc6921a247 501 SUPERFAMILY SSF51338 2 486 6.56E-25 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_a0015 27dea0222539d1ba78f52cdc6921a247 501 Pfam PF07969 Amidohydrolase family 251 480 1.3E-19 T 14-10-2018 IPR013108 Amidohydrolase 3 TMO_a0015 27dea0222539d1ba78f52cdc6921a247 501 Pfam PF07969 Amidohydrolase family 48 248 3.5E-18 T 14-10-2018 IPR013108 Amidohydrolase 3 TMO_a0015 27dea0222539d1ba78f52cdc6921a247 501 SUPERFAMILY SSF51556 60 425 2.32E-33 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_1030 b20e4859f61416ceee6fe89ab10be221 552 Gene3D G3DSA:3.40.190.10 54 532 2.6E-122 T 14-10-2018 TMO_1030 b20e4859f61416ceee6fe89ab10be221 552 SUPERFAMILY SSF53850 41 550 1.3E-124 T 14-10-2018 TMO_1030 b20e4859f61416ceee6fe89ab10be221 552 PIRSF PIRSF002741 6 550 1.3E-100 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_1030 b20e4859f61416ceee6fe89ab10be221 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 441 1.6E-78 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_1030 b20e4859f61416ceee6fe89ab10be221 552 Gene3D G3DSA:3.90.76.10 76 198 2.6E-122 T 14-10-2018 TMO_1030 b20e4859f61416ceee6fe89ab10be221 552 Gene3D G3DSA:3.10.105.10 293 518 2.6E-122 T 14-10-2018 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 249 303 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 SUPERFAMILY SSF81442 19 524 3.66E-157 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 Gene3D G3DSA:1.20.210.10 7 528 2.2E-177 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 30 471 1.2E-128 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 196 215 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 380 399 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 293 308 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 120 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 247 268 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 68 91 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 137 149 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 451 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 167 185 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 352 370 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 21 46 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1479 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 317 338 5.0E-99 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0719 12c8100d41a806a9848f57ec4ba3bb67 183 SUPERFAMILY SSF46785 40 177 7.66E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0719 12c8100d41a806a9848f57ec4ba3bb67 183 Gene3D G3DSA:1.10.10.10 28 180 3.2E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0719 12c8100d41a806a9848f57ec4ba3bb67 183 SMART SM00347 64 164 2.6E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0719 12c8100d41a806a9848f57ec4ba3bb67 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 5.6E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0719 12c8100d41a806a9848f57ec4ba3bb67 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 140 5.6E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0719 12c8100d41a806a9848f57ec4ba3bb67 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 120 5.6E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0719 12c8100d41a806a9848f57ec4ba3bb67 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 154 174 5.6E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0719 12c8100d41a806a9848f57ec4ba3bb67 183 Pfam PF12802 MarR family 70 128 8.4E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1748 cba7ef4171c94bc95079a9fe5983c532 544 TIGRFAM TIGR00337 PyrG: CTP synthase 2 536 2.9E-225 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TMO_1748 cba7ef4171c94bc95079a9fe5983c532 544 SUPERFAMILY SSF52317 289 540 1.01E-77 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1748 cba7ef4171c94bc95079a9fe5983c532 544 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.7E-55 T 14-10-2018 IPR017926 Glutamine amidotransferase TMO_1748 cba7ef4171c94bc95079a9fe5983c532 544 Gene3D G3DSA:3.40.50.300 1 285 1.8E-121 T 14-10-2018 TMO_1748 cba7ef4171c94bc95079a9fe5983c532 544 Pfam PF06418 CTP synthase N-terminus 3 264 2.8E-119 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TMO_1748 cba7ef4171c94bc95079a9fe5983c532 544 Hamap MF_01227 CTP synthase [pyrG]. 2 541 50.63 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TMO_1748 cba7ef4171c94bc95079a9fe5983c532 544 Gene3D G3DSA:3.40.50.880 288 544 1.5E-95 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1748 cba7ef4171c94bc95079a9fe5983c532 544 SUPERFAMILY SSF52540 1 266 2.82E-117 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1703 8b8664f05977667038265878d7957dbb 815 Pfam PF08448 PAS fold 430 538 4.1E-5 T 14-10-2018 IPR013656 PAS fold-4 TMO_1703 8b8664f05977667038265878d7957dbb 815 Gene3D G3DSA:3.30.450.20 414 537 9.1E-12 T 14-10-2018 TMO_1703 8b8664f05977667038265878d7957dbb 815 SMART SM00387 658 784 2.7E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1703 8b8664f05977667038265878d7957dbb 815 SMART SM00091 424 492 1.9E-4 T 14-10-2018 IPR000014 PAS domain TMO_1703 8b8664f05977667038265878d7957dbb 815 Gene3D G3DSA:1.10.287.130 538 615 7.4E-11 T 14-10-2018 TMO_1703 8b8664f05977667038265878d7957dbb 815 SUPERFAMILY SSF55785 414 537 7.99E-9 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1703 8b8664f05977667038265878d7957dbb 815 Pfam PF00512 His Kinase A (phospho-acceptor) domain 549 615 9.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1703 8b8664f05977667038265878d7957dbb 815 Gene3D G3DSA:3.30.565.10 621 785 1.2E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1703 8b8664f05977667038265878d7957dbb 815 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 659 782 1.1E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1703 8b8664f05977667038265878d7957dbb 815 SUPERFAMILY SSF55874 609 785 6.02E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1703 8b8664f05977667038265878d7957dbb 815 Pfam PF00672 HAMP domain 357 406 1.3E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_1703 8b8664f05977667038265878d7957dbb 815 SUPERFAMILY SSF47384 542 616 4.12E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_1703 8b8664f05977667038265878d7957dbb 815 PIRSF PIRSF037532 46 787 1.2E-229 T 14-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator TMO_1703 8b8664f05977667038265878d7957dbb 815 Gene3D G3DSA:1.20.1480.50 321 413 3.5E-17 T 14-10-2018 TMO_1703 8b8664f05977667038265878d7957dbb 815 SMART SM00304 357 410 3.5E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_1703 8b8664f05977667038265878d7957dbb 815 SUPERFAMILY SSF158472 357 406 9.15E-12 T 14-10-2018 TMO_1703 8b8664f05977667038265878d7957dbb 815 PRINTS PR00344 Bacterial sensor protein C-terminal signature 728 738 2.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1703 8b8664f05977667038265878d7957dbb 815 PRINTS PR00344 Bacterial sensor protein C-terminal signature 739 757 2.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1703 8b8664f05977667038265878d7957dbb 815 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 724 2.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1703 8b8664f05977667038265878d7957dbb 815 SMART SM00388 547 618 4.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0542 fe25dc0ec8ee1ea7d0971362b264cc6d 557 SUPERFAMILY SSF56801 14 551 5.89E-154 T 14-10-2018 TMO_a0542 fe25dc0ec8ee1ea7d0971362b264cc6d 557 Pfam PF00501 AMP-binding enzyme 27 453 1.8E-105 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0542 fe25dc0ec8ee1ea7d0971362b264cc6d 557 Gene3D G3DSA:3.40.50.12780 14 450 1.2E-116 T 14-10-2018 TMO_a0542 fe25dc0ec8ee1ea7d0971362b264cc6d 557 Gene3D G3DSA:3.30.300.310 451 555 4.8E-29 T 14-10-2018 TMO_a0542 fe25dc0ec8ee1ea7d0971362b264cc6d 557 Pfam PF13193 AMP-binding enzyme C-terminal domain 463 541 2.7E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0542 fe25dc0ec8ee1ea7d0971362b264cc6d 557 ProSitePatterns PS00455 Putative AMP-binding domain signature. 204 215 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0572 f8cb6277086a284f5dfb137970ed48c9 146 SUPERFAMILY SSF54637 17 145 1.85E-13 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0572 f8cb6277086a284f5dfb137970ed48c9 146 Gene3D G3DSA:3.10.129.10 17 145 8.0E-14 T 14-10-2018 TMO_0572 f8cb6277086a284f5dfb137970ed48c9 146 Pfam PF03061 Thioesterase superfamily 64 135 3.7E-4 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_0982 d6f5bed0192e4639b67090bd70f7a122 196 Pfam PF02627 Carboxymuconolactone decarboxylase family 53 104 5.0E-10 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_0982 d6f5bed0192e4639b67090bd70f7a122 196 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 15 190 2.6E-60 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related TMO_0982 d6f5bed0192e4639b67090bd70f7a122 196 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 71 116 9.9E-13 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_0982 d6f5bed0192e4639b67090bd70f7a122 196 Gene3D G3DSA:1.20.1290.10 73 196 2.5E-41 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_0982 d6f5bed0192e4639b67090bd70f7a122 196 Gene3D G3DSA:1.20.5.810 25 72 3.0E-21 T 14-10-2018 TMO_0982 d6f5bed0192e4639b67090bd70f7a122 196 SUPERFAMILY SSF69118 13 194 1.83E-54 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 PRINTS PR01183 Ribonucleotide reductase large chain signature 275 294 9.7E-7 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 PRINTS PR01183 Ribonucleotide reductase large chain signature 570 593 9.7E-7 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 PRINTS PR01183 Ribonucleotide reductase large chain signature 542 564 9.7E-7 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 31 147 2.3E-39 T 14-10-2018 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 SUPERFAMILY SSF51998 197 916 3.66E-124 T 14-10-2018 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 126 747 1.8E-139 T 14-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 Pfam PF02867 Ribonucleotide reductase, barrel domain 806 912 2.4E-17 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 Pfam PF02867 Ribonucleotide reductase, barrel domain 198 734 2.4E-106 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 SUPERFAMILY SSF75625 296 376 2.35E-11 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 Gene3D G3DSA:3.20.70.20 382 758 1.1E-93 T 14-10-2018 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 Gene3D G3DSA:3.20.70.20 777 926 1.4E-29 T 14-10-2018 TMO_c0741 5054fe3805048f20ac152d1b759156e2 1222 Gene3D G3DSA:3.20.70.20 92 358 3.3E-57 T 14-10-2018 TMO_a0076 d64cb490907f79b537e230a51e5f4bb4 238 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 13 146 1.7E-46 T 14-10-2018 IPR017748 T6S-associated protein TagF TMO_a0076 d64cb490907f79b537e230a51e5f4bb4 238 Gene3D G3DSA:3.40.1730.10 10 237 9.8E-61 T 14-10-2018 IPR038225 T6S-associated protein TagF superfamily TMO_a0076 d64cb490907f79b537e230a51e5f4bb4 238 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 14 147 4.9E-42 T 14-10-2018 IPR017748 T6S-associated protein TagF TMO_0577 a19450e6d7fe238154e4737115cac0a7 299 SUPERFAMILY SSF53448 5 272 2.82E-67 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_0577 a19450e6d7fe238154e4737115cac0a7 299 Gene3D G3DSA:3.90.550.10 1 296 4.4E-90 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_0577 a19450e6d7fe238154e4737115cac0a7 299 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 7 268 6.4E-108 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 TMO_0577 a19450e6d7fe238154e4737115cac0a7 299 Pfam PF00483 Nucleotidyl transferase 14 269 1.6E-29 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TMO_0983 46f96d10bd0a4c018fd81ada66607d81 357 ProSitePatterns PS00789 Chorismate synthase signature 3. 323 339 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TMO_0983 46f96d10bd0a4c018fd81ada66607d81 357 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TMO_0983 46f96d10bd0a4c018fd81ada66607d81 357 Gene3D G3DSA:3.60.150.10 1 356 4.6E-147 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TMO_0983 46f96d10bd0a4c018fd81ada66607d81 357 PIRSF PIRSF001456 3 355 1.7E-139 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TMO_0983 46f96d10bd0a4c018fd81ada66607d81 357 Hamap MF_00300 Chorismate synthase [aroC]. 10 356 36.763 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TMO_0983 46f96d10bd0a4c018fd81ada66607d81 357 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TMO_0983 46f96d10bd0a4c018fd81ada66607d81 357 SUPERFAMILY SSF103263 4 355 7.33E-145 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TMO_0983 46f96d10bd0a4c018fd81ada66607d81 357 Pfam PF01264 Chorismate synthase 10 349 5.5E-138 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TMO_0983 46f96d10bd0a4c018fd81ada66607d81 357 TIGRFAM TIGR00033 aroC: chorismate synthase 10 353 4.9E-135 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TMO_c0466 fd0f19d46806cabd7e5e023dd0652023 337 SUPERFAMILY SSF49785 183 333 4.25E-49 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily TMO_c0466 fd0f19d46806cabd7e5e023dd0652023 337 Pfam PF03561 Allantoicase repeat 193 331 1.3E-43 T 14-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 TMO_c0466 fd0f19d46806cabd7e5e023dd0652023 337 Pfam PF03561 Allantoicase repeat 18 171 3.7E-42 T 14-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 TMO_c0466 fd0f19d46806cabd7e5e023dd0652023 337 TIGRFAM TIGR02961 allantoicase: allantoicase 9 331 6.7E-112 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 TMO_c0466 fd0f19d46806cabd7e5e023dd0652023 337 PIRSF PIRSF016516 3 334 1.7E-115 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 TMO_c0466 fd0f19d46806cabd7e5e023dd0652023 337 Gene3D G3DSA:2.60.120.260 183 332 3.9E-49 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily TMO_c0466 fd0f19d46806cabd7e5e023dd0652023 337 SUPERFAMILY SSF49785 8 174 7.65E-52 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily TMO_c0466 fd0f19d46806cabd7e5e023dd0652023 337 Hamap MF_00813 Probable allantoicase [alc]. 1 334 44.22 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 TMO_c0466 fd0f19d46806cabd7e5e023dd0652023 337 Gene3D G3DSA:2.60.120.260 3 175 1.5E-54 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily TMO_c0485 ab050244c840b009a21d7cf36755bf3d 531 SUPERFAMILY SSF52096 237 511 3.53E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_c0485 ab050244c840b009a21d7cf36755bf3d 531 Gene3D G3DSA:3.90.226.10 17 275 8.2E-63 T 14-10-2018 TMO_c0485 ab050244c840b009a21d7cf36755bf3d 531 SUPERFAMILY SSF52096 18 270 1.08E-48 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_c0485 ab050244c840b009a21d7cf36755bf3d 531 Pfam PF01039 Carboxyl transferase domain 44 516 1.1E-87 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 TMO_c0485 ab050244c840b009a21d7cf36755bf3d 531 Gene3D G3DSA:3.90.226.10 276 522 1.8E-71 T 14-10-2018 TMO_c0589 d855725d2aaa1d878504595eeab9cf27 110 Gene3D G3DSA:2.60.300.12 5 110 1.1E-35 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 TMO_c0589 d855725d2aaa1d878504595eeab9cf27 110 SUPERFAMILY SSF89360 6 99 1.96E-29 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 TMO_c0589 d855725d2aaa1d878504595eeab9cf27 110 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 TMO_c0589 d855725d2aaa1d878504595eeab9cf27 110 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 7 110 9.4E-35 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 TMO_c0589 d855725d2aaa1d878504595eeab9cf27 110 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 106 2.1E-19 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 TMO_b0083 7d7a66070be3d699ecee90b6e9687f6d 340 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 76 87 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0083 7d7a66070be3d699ecee90b6e9687f6d 340 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0083 7d7a66070be3d699ecee90b6e9687f6d 340 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 66 76 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0083 7d7a66070be3d699ecee90b6e9687f6d 340 Gene3D G3DSA:3.40.190.10 124 325 1.3E-43 T 14-10-2018 TMO_b0083 7d7a66070be3d699ecee90b6e9687f6d 340 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 40 98 5.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0083 7d7a66070be3d699ecee90b6e9687f6d 340 SUPERFAMILY SSF53850 122 328 1.16E-30 T 14-10-2018 TMO_b0083 7d7a66070be3d699ecee90b6e9687f6d 340 SUPERFAMILY SSF46785 35 117 3.4E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0083 7d7a66070be3d699ecee90b6e9687f6d 340 Gene3D G3DSA:1.10.10.10 30 119 1.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0083 7d7a66070be3d699ecee90b6e9687f6d 340 Gene3D G3DSA:3.40.190.10 203 301 1.3E-43 T 14-10-2018 TMO_b0083 7d7a66070be3d699ecee90b6e9687f6d 340 Pfam PF03466 LysR substrate binding domain 126 330 1.0E-18 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_a0216 aa28bc7eaa92d6d56aac66a573626e2a 165 Pfam PF11154 Protein of unknown function (DUF2934) 10 46 1.6E-11 T 14-10-2018 IPR021327 Protein of unknown function DUF2934 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 87 2.2E-34 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 Gene3D G3DSA:2.40.500.20 88 199 7.6E-45 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 SUPERFAMILY SSF46609 1 88 3.27E-37 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 Gene3D G3DSA:1.10.287.990 20 86 1.1E-24 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.9E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PRINTS PR01703 Manganese superoxide dismutase signature 159 171 1.9E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.9E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 1.9E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PRINTS PR01703 Manganese superoxide dismutase signature 70 83 1.9E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 94 194 2.1E-38 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PIRSF PIRSF000349 1 199 2.2E-83 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 SUPERFAMILY SSF54719 89 198 8.77E-46 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_1550 0a9e311b1904ecf02ac5a19f3e6eafdc 199 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 161 168 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TMO_0355 1d5af4c2e7bfc0f427e0241414b68835 412 Gene3D G3DSA:3.60.70.12 15 282 1.1E-85 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TMO_0355 1d5af4c2e7bfc0f427e0241414b68835 412 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 412 145.089 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TMO_0355 1d5af4c2e7bfc0f427e0241414b68835 412 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 18 412 9.2E-118 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TMO_0355 1d5af4c2e7bfc0f427e0241414b68835 412 SUPERFAMILY SSF56266 19 409 7.98E-129 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TMO_0355 1d5af4c2e7bfc0f427e0241414b68835 412 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 30 410 3.0E-99 T 14-10-2018 TMO_0355 1d5af4c2e7bfc0f427e0241414b68835 412 Gene3D G3DSA:3.10.20.340 283 412 5.2E-43 T 14-10-2018 TMO_0355 1d5af4c2e7bfc0f427e0241414b68835 412 Pfam PF01960 ArgJ family 27 412 2.5E-135 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TMO_0469 ff4d518381af409757163e6f730d10d7 221 SMART SM00862 145 216 1.2E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_0469 ff4d518381af409757163e6f730d10d7 221 Pfam PF00072 Response regulator receiver domain 3 111 7.7E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0469 ff4d518381af409757163e6f730d10d7 221 SUPERFAMILY SSF46894 120 217 8.22E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_0469 ff4d518381af409757163e6f730d10d7 221 SUPERFAMILY SSF52172 1 118 5.55E-35 T 14-10-2018 IPR011006 CheY-like superfamily TMO_0469 ff4d518381af409757163e6f730d10d7 221 Gene3D G3DSA:1.10.10.10 119 219 6.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0469 ff4d518381af409757163e6f730d10d7 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 1.0E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_0469 ff4d518381af409757163e6f730d10d7 221 SMART SM00448 1 112 1.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0469 ff4d518381af409757163e6f730d10d7 221 Gene3D G3DSA:3.40.50.2300 1 118 8.3E-37 T 14-10-2018 TMO_c0782 8f6f416a43954992b6c1a36cdec02515 596 Gene3D G3DSA:2.40.110.10 161 286 4.2E-29 T 14-10-2018 TMO_c0782 8f6f416a43954992b6c1a36cdec02515 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 451 1.5E-20 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_c0782 8f6f416a43954992b6c1a36cdec02515 596 SUPERFAMILY SSF56645 39 279 4.97E-59 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_c0782 8f6f416a43954992b6c1a36cdec02515 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 35 2.8E-14 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria TMO_c0782 8f6f416a43954992b6c1a36cdec02515 596 Gene3D G3DSA:1.10.540.10 25 159 1.5E-17 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_c0782 8f6f416a43954992b6c1a36cdec02515 596 Gene3D G3DSA:1.20.140.10 287 457 2.7E-45 T 14-10-2018 TMO_c0782 8f6f416a43954992b6c1a36cdec02515 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 7.2E-19 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_c0782 8f6f416a43954992b6c1a36cdec02515 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 475 591 5.7E-31 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain TMO_c0782 8f6f416a43954992b6c1a36cdec02515 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 157 1.6E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_c0782 8f6f416a43954992b6c1a36cdec02515 596 SUPERFAMILY SSF47203 287 459 6.28E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_1109 0b8f687f4fd20c8ba6281b821ae142c5 275 Gene3D G3DSA:3.30.1330.30 9 110 2.8E-23 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like TMO_1109 0b8f687f4fd20c8ba6281b821ae142c5 275 SUPERFAMILY SSF55315 10 111 4.94E-18 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like TMO_1109 0b8f687f4fd20c8ba6281b821ae142c5 275 SUPERFAMILY SSF75217 120 270 1.05E-38 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases TMO_1109 0b8f687f4fd20c8ba6281b821ae142c5 275 SMART SM00967 37 113 3.0E-5 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TMO_1109 0b8f687f4fd20c8ba6281b821ae142c5 275 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 37 112 4.2E-5 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TMO_1109 0b8f687f4fd20c8ba6281b821ae142c5 275 Pfam PF00588 SpoU rRNA Methylase family 124 263 3.2E-30 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TMO_1109 0b8f687f4fd20c8ba6281b821ae142c5 275 Gene3D G3DSA:3.40.1280.10 118 273 3.5E-45 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_1406 c80d0ed47342ca74a3533d152e77ec35 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 422 5.7E-91 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_1406 c80d0ed47342ca74a3533d152e77ec35 428 PIRSF PIRSF006066 3 428 1.5E-92 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_1406 c80d0ed47342ca74a3533d152e77ec35 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 424 2.6E-100 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_2139 767884cf1d403c2a552c36ece9f5d54f 275 Pfam PF04454 Encapsulating protein for peroxidase 1 251 2.4E-69 T 14-10-2018 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 TMO_2139 767884cf1d403c2a552c36ece9f5d54f 275 PIRSF PIRSF019254 1 266 3.2E-67 T 14-10-2018 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 TMO_2139 767884cf1d403c2a552c36ece9f5d54f 275 Gene3D G3DSA:3.30.2320.10 133 261 1.1E-75 T 14-10-2018 TMO_2139 767884cf1d403c2a552c36ece9f5d54f 275 Gene3D G3DSA:3.30.2400.30 2 255 1.1E-75 T 14-10-2018 TMO_1525 6cef0ca40a63090c64d0146cc74ee8b2 315 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 314 9.4E-99 T 14-10-2018 IPR007296 Domain of unknown function DUF403 TMO_2435 ba09bab7f7dd457b71a410b39ceb8afa 137 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 8 123 1.8E-54 T 14-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 TMO_2435 ba09bab7f7dd457b71a410b39ceb8afa 137 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 117 3.8E-20 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_2435 ba09bab7f7dd457b71a410b39ceb8afa 137 Gene3D G3DSA:1.20.1290.10 5 125 1.5E-36 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_2435 ba09bab7f7dd457b71a410b39ceb8afa 137 SUPERFAMILY SSF69118 7 122 1.38E-31 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SUPERFAMILY SSF55874 955 1154 1.27E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Gene3D G3DSA:3.30.450.20 356 485 2.6E-15 T 14-10-2018 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Gene3D G3DSA:3.30.450.20 486 611 1.3E-8 T 14-10-2018 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SMART SM00388 901 966 3.9E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Pfam PF00072 Response regulator receiver domain 1318 1431 2.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Pfam PF00072 Response regulator receiver domain 1179 1290 1.0E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Gene3D G3DSA:3.30.450.20 732 858 4.5E-30 T 14-10-2018 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SUPERFAMILY SSF47226 1465 1571 1.7E-12 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SMART SM00086 440 482 0.0053 T 14-10-2018 IPR001610 PAC motif TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SMART SM00086 820 860 23.0 T 14-10-2018 IPR001610 PAC motif TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SUPERFAMILY SSF55785 360 480 6.11E-16 T 14-10-2018 IPR035965 PAS domain superfamily TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Gene3D G3DSA:1.10.287.130 865 964 1.7E-28 T 14-10-2018 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SUPERFAMILY SSF55785 729 858 1.01E-27 T 14-10-2018 IPR035965 PAS domain superfamily TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Pfam PF00512 His Kinase A (phospho-acceptor) domain 901 965 7.4E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SUPERFAMILY SSF52172 1173 1293 1.37E-17 T 14-10-2018 IPR011006 CheY-like superfamily TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SUPERFAMILY SSF55785 601 719 2.93E-8 T 14-10-2018 IPR035965 PAS domain superfamily TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SUPERFAMILY SSF55785 480 603 3.32E-10 T 14-10-2018 IPR035965 PAS domain superfamily TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Pfam PF00989 PAS fold 745 856 1.1E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Pfam PF12860 PAS fold 500 607 5.9E-14 T 14-10-2018 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SMART SM00091 369 434 1.7 T 14-10-2018 IPR000014 PAS domain TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SMART SM00091 744 810 5.8E-9 T 14-10-2018 IPR000014 PAS domain TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SMART SM00091 494 560 15.0 T 14-10-2018 IPR000014 PAS domain TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SMART SM00091 621 691 94.0 T 14-10-2018 IPR000014 PAS domain TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SMART SM01079 80 270 5.3E-49 T 14-10-2018 IPR006189 CHASE domain TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Gene3D G3DSA:3.30.450.20 631 731 2.3E-12 T 14-10-2018 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Gene3D G3DSA:3.30.450.350 85 288 2.6E-22 T 14-10-2018 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Pfam PF08448 PAS fold 378 482 3.6E-9 T 14-10-2018 IPR013656 PAS fold-4 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Pfam PF08448 PAS fold 645 733 1.8E-6 T 14-10-2018 IPR013656 PAS fold-4 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Gene3D G3DSA:3.40.50.2300 1313 1436 1.9E-44 T 14-10-2018 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Gene3D G3DSA:1.20.120.160 1459 1570 2.9E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1013 1155 2.9E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Pfam PF03924 CHASE domain 84 267 1.3E-42 T 14-10-2018 IPR006189 CHASE domain TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SUPERFAMILY SSF52172 1315 1442 4.27E-40 T 14-10-2018 IPR011006 CheY-like superfamily TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SMART SM00448 1176 1290 1.6E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SMART SM00448 1316 1432 4.6E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 366 489 9.8E-13 T 14-10-2018 IPR000014 PAS domain TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 740 863 2.0E-21 T 14-10-2018 IPR000014 PAS domain TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Gene3D G3DSA:3.30.565.10 967 1158 4.4E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 Gene3D G3DSA:3.40.50.2300 1170 1294 3.7E-17 T 14-10-2018 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SUPERFAMILY SSF47384 884 967 5.1E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 SMART SM00387 1013 1156 6.5E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1116 1134 2.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1099 1109 2.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1081 1095 2.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0206 8b64d7fe733c08130b22bd8ad69b3cd8 1592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1140 1153 2.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2091 84749388d93fe5b0dbf5635ea1d78f32 344 SUPERFAMILY SSF53850 58 250 4.56E-36 T 14-10-2018 TMO_2091 84749388d93fe5b0dbf5635ea1d78f32 344 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 39 288 8.2E-65 T 14-10-2018 TMO_2091 84749388d93fe5b0dbf5635ea1d78f32 344 Gene3D G3DSA:3.40.190.10 122 235 4.1E-92 T 14-10-2018 TMO_2091 84749388d93fe5b0dbf5635ea1d78f32 344 Gene3D G3DSA:1.20.58.90 287 344 4.8E-27 T 14-10-2018 TMO_2091 84749388d93fe5b0dbf5635ea1d78f32 344 Gene3D G3DSA:3.40.190.10 38 262 4.1E-92 T 14-10-2018 TMO_2091 84749388d93fe5b0dbf5635ea1d78f32 344 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 7 300 8.9E-101 T 14-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 TMO_2091 84749388d93fe5b0dbf5635ea1d78f32 344 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 4 260 3.0E-83 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 TMO_1891 a57b79f1e944f029c99219f4261b817a 294 SUPERFAMILY SSF46689 244 293 4.66E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1891 a57b79f1e944f029c99219f4261b817a 294 SMART SM00342 208 291 3.2E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_1891 a57b79f1e944f029c99219f4261b817a 294 SUPERFAMILY SSF46689 207 242 3.46E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1891 a57b79f1e944f029c99219f4261b817a 294 Gene3D G3DSA:1.10.10.60 195 294 1.7E-24 T 14-10-2018 TMO_1891 a57b79f1e944f029c99219f4261b817a 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 287 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_1891 a57b79f1e944f029c99219f4261b817a 294 Pfam PF12833 Helix-turn-helix domain 214 292 1.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0209 340914305525aa45931029d68474a604 304 Gene3D G3DSA:3.40.190.10 170 273 2.0E-56 T 14-10-2018 TMO_c0209 340914305525aa45931029d68474a604 304 Pfam PF03466 LysR substrate binding domain 94 300 7.2E-38 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0209 340914305525aa45931029d68474a604 304 SUPERFAMILY SSF53850 96 300 2.71E-40 T 14-10-2018 TMO_c0209 340914305525aa45931029d68474a604 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0209 340914305525aa45931029d68474a604 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0209 340914305525aa45931029d68474a604 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0209 340914305525aa45931029d68474a604 304 SUPERFAMILY SSF46785 10 91 3.43E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0209 340914305525aa45931029d68474a604 304 Gene3D G3DSA:1.10.10.10 8 90 4.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0209 340914305525aa45931029d68474a604 304 Gene3D G3DSA:3.40.190.10 98 297 2.0E-56 T 14-10-2018 TMO_c0209 340914305525aa45931029d68474a604 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.9E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0720 bd2ef917204afa5c08286d98a93c9a03 357 Gene3D G3DSA:1.10.287.950 3 141 3.0E-24 T 14-10-2018 TMO_c0720 bd2ef917204afa5c08286d98a93c9a03 357 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 34 113 1.2E-20 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_c0720 bd2ef917204afa5c08286d98a93c9a03 357 Gene3D G3DSA:3.30.450.20 142 262 2.8E-6 T 14-10-2018 TMO_c0720 bd2ef917204afa5c08286d98a93c9a03 357 SUPERFAMILY SSF58104 18 108 1.31E-25 T 14-10-2018 TMO_c0720 bd2ef917204afa5c08286d98a93c9a03 357 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 74 103 1.9E-13 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0720 bd2ef917204afa5c08286d98a93c9a03 357 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 45 72 1.9E-13 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1526 715d97c1e64cef373468157fd2a2950e 516 Gene3D G3DSA:3.40.50.11290 254 351 6.1E-42 T 14-10-2018 TMO_1526 715d97c1e64cef373468157fd2a2950e 516 SUPERFAMILY SSF56059 58 507 1.59E-60 T 14-10-2018 TMO_1526 715d97c1e64cef373468157fd2a2950e 516 Pfam PF14403 Circularly permuted ATP-grasp type 2 114 492 2.8E-167 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 TMO_1526 715d97c1e64cef373468157fd2a2950e 516 PIRSF PIRSF005522 28 516 2.7E-223 T 14-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 TMO_1526 715d97c1e64cef373468157fd2a2950e 516 Gene3D G3DSA:3.30.1490.270 389 448 8.2E-26 T 14-10-2018 TMO_0865 762b993f43703be64cfef7a35051f29b 468 Pfam PF03929 PepSY-associated TM region 25 412 4.0E-61 T 14-10-2018 IPR005625 PepSY-associated TM protein TMO_0895 119551190e1936b0cefed24c3d0e19e1 112 SUPERFAMILY SSF56300 1 98 1.21E-27 T 14-10-2018 TMO_0895 119551190e1936b0cefed24c3d0e19e1 112 Gene3D G3DSA:3.60.21.10 1 103 1.8E-35 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like TMO_0895 119551190e1936b0cefed24c3d0e19e1 112 Pfam PF13277 YmdB-like protein 4 95 9.7E-34 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like TMO_c0888 78c82068ccd12dc122a92fb2f1a00d7e 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 34 442 3.3E-89 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 TMO_c0888 78c82068ccd12dc122a92fb2f1a00d7e 477 Pfam PF07690 Major Facilitator Superfamily 37 429 8.6E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0888 78c82068ccd12dc122a92fb2f1a00d7e 477 Gene3D G3DSA:1.20.1720.10 33 243 6.8E-35 T 14-10-2018 TMO_c0888 78c82068ccd12dc122a92fb2f1a00d7e 477 Gene3D G3DSA:1.20.1250.20 279 474 1.3E-16 T 14-10-2018 TMO_c0888 78c82068ccd12dc122a92fb2f1a00d7e 477 SUPERFAMILY SSF103473 27 474 3.01E-54 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0888 78c82068ccd12dc122a92fb2f1a00d7e 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 127 147 4.0E-6 T 14-10-2018 TMO_c0888 78c82068ccd12dc122a92fb2f1a00d7e 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 4.0E-6 T 14-10-2018 TMO_0743 61ec8abeff9f6ccf59be16928a1e3150 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 1.6E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0743 61ec8abeff9f6ccf59be16928a1e3150 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 1.6E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0743 61ec8abeff9f6ccf59be16928a1e3150 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 1.6E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0743 61ec8abeff9f6ccf59be16928a1e3150 157 SUPERFAMILY SSF46785 13 147 6.21E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0743 61ec8abeff9f6ccf59be16928a1e3150 157 Pfam PF01047 MarR family 44 100 1.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0743 61ec8abeff9f6ccf59be16928a1e3150 157 Gene3D G3DSA:1.10.10.10 15 151 1.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0743 61ec8abeff9f6ccf59be16928a1e3150 157 SMART SM00347 37 140 2.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_b0179 a559e9718c022c48eedbd82297c66294 377 Pfam PF00155 Aminotransferase class I and II 23 357 3.0E-37 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_b0179 a559e9718c022c48eedbd82297c66294 377 SUPERFAMILY SSF53383 12 363 5.59E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_b0179 a559e9718c022c48eedbd82297c66294 377 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 212 225 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TMO_b0179 a559e9718c022c48eedbd82297c66294 377 Gene3D G3DSA:3.40.640.10 17 371 1.2E-56 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0798 7a3c570c9b127752fc46c889c9faa0ec 291 Pfam PF01343 Peptidase family S49 93 237 9.2E-26 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 TMO_c0798 7a3c570c9b127752fc46c889c9faa0ec 291 SUPERFAMILY SSF52096 11 232 1.28E-36 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_c0798 7a3c570c9b127752fc46c889c9faa0ec 291 Gene3D G3DSA:3.90.226.10 29 235 1.7E-52 T 14-10-2018 TMO_c0798 7a3c570c9b127752fc46c889c9faa0ec 291 Gene3D G3DSA:3.40.1750.20 133 199 1.7E-52 T 14-10-2018 TMO_b0525 bbd9eeb9bd7a846ca57243542157a00c 653 SUPERFAMILY SSF51905 144 392 5.0E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0525 bbd9eeb9bd7a846ca57243542157a00c 653 Gene3D G3DSA:3.50.50.60 292 369 3.4E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0525 bbd9eeb9bd7a846ca57243542157a00c 653 Gene3D G3DSA:3.50.50.60 135 291 1.0E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0525 bbd9eeb9bd7a846ca57243542157a00c 653 SUPERFAMILY SSF51905 426 618 3.71E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0525 bbd9eeb9bd7a846ca57243542157a00c 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 166 6.3E-6 T 14-10-2018 TMO_b0525 bbd9eeb9bd7a846ca57243542157a00c 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 6.3E-6 T 14-10-2018 TMO_b0525 bbd9eeb9bd7a846ca57243542157a00c 653 Gene3D G3DSA:3.50.50.60 459 641 1.3E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0525 bbd9eeb9bd7a846ca57243542157a00c 653 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 168 1.2E-5 T 14-10-2018 TMO_b0525 bbd9eeb9bd7a846ca57243542157a00c 653 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 339 1.2E-5 T 14-10-2018 TMO_b0525 bbd9eeb9bd7a846ca57243542157a00c 653 Pfam PF00743 Flavin-binding monooxygenase-like 146 347 6.5E-16 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_2170 6546b9b8913b2667387f449f4ce02524 279 SUPERFAMILY SSF47781 108 175 2.82E-8 T 14-10-2018 IPR010994 RuvA domain 2-like TMO_2170 6546b9b8913b2667387f449f4ce02524 279 Pfam PF04002 RadC-like JAB domain 196 269 1.1E-23 T 14-10-2018 IPR025657 RadC-like JAB domain TMO_2170 6546b9b8913b2667387f449f4ce02524 279 TIGRFAM TIGR00608 radc: DNA repair protein RadC 103 269 7.9E-50 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 TMO_2170 6546b9b8913b2667387f449f4ce02524 279 Gene3D G3DSA:1.10.150.20 123 178 3.2E-7 T 14-10-2018 TMO_2170 6546b9b8913b2667387f449f4ce02524 279 Gene3D G3DSA:3.40.140.10 195 274 1.8E-20 T 14-10-2018 TMO_2171 3c9d83c2fe5f48a670062394b104b85c 366 SUPERFAMILY SSF56349 54 340 6.47E-40 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_2171 3c9d83c2fe5f48a670062394b104b85c 366 Pfam PF00589 Phage integrase family 168 319 1.3E-8 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_2171 3c9d83c2fe5f48a670062394b104b85c 366 Gene3D G3DSA:1.10.443.10 166 341 4.4E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TMO_2171 3c9d83c2fe5f48a670062394b104b85c 366 Gene3D G3DSA:1.10.150.130 52 165 1.3E-8 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal TMO_c0144 a80e2c419220b5840e8b68dc1e9e27de 256 SMART SM00267 77 249 4.1E-46 T 14-10-2018 IPR000160 GGDEF domain TMO_c0144 a80e2c419220b5840e8b68dc1e9e27de 256 SUPERFAMILY SSF55073 93 248 1.49E-41 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_c0144 a80e2c419220b5840e8b68dc1e9e27de 256 Gene3D G3DSA:3.30.70.270 74 249 5.9E-51 T 14-10-2018 TMO_c0144 a80e2c419220b5840e8b68dc1e9e27de 256 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 84 248 5.6E-45 T 14-10-2018 IPR000160 GGDEF domain TMO_c0144 a80e2c419220b5840e8b68dc1e9e27de 256 Pfam PF00990 Diguanylate cyclase, GGDEF domain 89 245 4.2E-42 T 14-10-2018 IPR000160 GGDEF domain TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 Pfam PF00154 recA bacterial DNA recombination protein 23 284 1.0E-146 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 SUPERFAMILY SSF54752 284 343 2.62E-23 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 ProSitePatterns PS00321 recA signature. 229 237 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 Gene3D G3DSA:3.40.50.300 42 283 4.4E-83 T 14-10-2018 TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 PRINTS PR00142 RecA protein signature 313 330 5.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 PRINTS PR00142 RecA protein signature 226 254 5.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 PRINTS PR00142 RecA protein signature 143 172 5.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 PRINTS PR00142 RecA protein signature 109 138 5.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 PRINTS PR00142 RecA protein signature 181 210 5.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 PRINTS PR00142 RecA protein signature 259 288 5.4E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 SUPERFAMILY SSF52540 21 283 1.13E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 20 340 1.9E-177 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 Gene3D G3DSA:3.30.250.10 284 354 2.2E-30 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 Hamap MF_00268 Protein RecA [recA]. 21 345 52.973 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_1129 5ca3e0e563e30067b3fbe5d53b53cdea 366 SMART SM00382 73 244 8.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1177 cacdd4e87d43961f97701367f9159bc1 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 282 3.2E-43 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_1177 cacdd4e87d43961f97701367f9159bc1 317 Gene3D G3DSA:3.40.50.720 102 283 7.8E-100 T 14-10-2018 TMO_1177 cacdd4e87d43961f97701367f9159bc1 317 SUPERFAMILY SSF51735 106 283 2.01E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1177 cacdd4e87d43961f97701367f9159bc1 317 Gene3D G3DSA:3.40.50.720 24 317 7.8E-100 T 14-10-2018 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 Gene3D G3DSA:3.90.226.10 590 850 8.5E-70 T 14-10-2018 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 SUPERFAMILY SSF52096 599 854 3.37E-48 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 SMART SM00878 357 467 7.7E-37 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 Pfam PF00289 Biotin carboxylase, N-terminal domain 15 122 7.8E-40 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 Gene3D G3DSA:3.30.470.20 216 480 1.5E-85 T 14-10-2018 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 Gene3D G3DSA:2.40.50.100 505 574 4.1E-19 T 14-10-2018 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 SUPERFAMILY SSF52440 12 124 3.74E-40 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 Pfam PF02785 Biotin carboxylase C-terminal domain 357 466 3.2E-28 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 Gene3D G3DSA:3.90.226.10 852 1090 2.8E-69 T 14-10-2018 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 530 547 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 Pfam PF01039 Carboxyl transferase domain 621 1084 6.1E-71 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 Pfam PF00364 Biotin-requiring enzyme 508 571 5.5E-13 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 Gene3D G3DSA:3.40.50.20 15 142 1.5E-47 T 14-10-2018 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 303 310 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 Gene3D G3DSA:3.30.1490.20 144 215 7.0E-19 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 127 340 9.2E-57 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 SUPERFAMILY SSF51230 500 574 1.31E-17 T 14-10-2018 IPR011053 Single hybrid motif TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 SUPERFAMILY SSF52096 843 1092 1.99E-61 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 SUPERFAMILY SSF51246 351 470 1.41E-27 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TMO_b0187 3d065aac52ae3299a0eadec8da4ea357 1113 SUPERFAMILY SSF56059 95 343 1.43E-56 T 14-10-2018 TMO_b0332 faac66f00a6750e5852798cd3bfb8196 264 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0332 faac66f00a6750e5852798cd3bfb8196 264 Gene3D G3DSA:3.40.50.300 2 256 4.8E-65 T 14-10-2018 TMO_b0332 faac66f00a6750e5852798cd3bfb8196 264 SUPERFAMILY SSF52540 6 238 2.66E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0332 faac66f00a6750e5852798cd3bfb8196 264 SMART SM00382 29 223 2.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0332 faac66f00a6750e5852798cd3bfb8196 264 Pfam PF00005 ABC transporter 20 168 8.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 SUPERFAMILY SSF51735 1 247 7.88E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.9E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 7.9E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 7.9E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 7.9E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.9E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 7.9E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 Gene3D G3DSA:3.40.50.720 1 248 1.5E-83 T 14-10-2018 TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 196 0.0098 T 14-10-2018 TMO_c0569 fd3ab04b48be4bf82cd6c4995cc82e13 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 2.8E-69 T 14-10-2018 TMO_1050 d77e5cae8e674035dbc633ccf688b2b2 190 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 182 3.3E-18 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_1050 d77e5cae8e674035dbc633ccf688b2b2 190 SMART SM00855 7 146 5.8E-11 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_1050 d77e5cae8e674035dbc633ccf688b2b2 190 SUPERFAMILY SSF53254 5 175 4.91E-21 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_1050 d77e5cae8e674035dbc633ccf688b2b2 190 Gene3D G3DSA:3.40.50.1240 1 184 1.0E-22 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_c0056 1c9987cdb4ef020509253872f4eec75e 189 Pfam PF01464 Transglycosylase SLT domain 29 150 1.4E-6 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 TMO_c0056 1c9987cdb4ef020509253872f4eec75e 189 Gene3D G3DSA:1.10.530.10 24 177 5.0E-9 T 14-10-2018 TMO_c0056 1c9987cdb4ef020509253872f4eec75e 189 SUPERFAMILY SSF53955 26 169 3.53E-16 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_3508 4600ce02bc351d399b0bfeaca0ea6144 256 Gene3D G3DSA:3.40.50.300 9 254 1.4E-65 T 14-10-2018 TMO_3508 4600ce02bc351d399b0bfeaca0ea6144 256 Pfam PF00005 ABC transporter 26 180 4.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3508 4600ce02bc351d399b0bfeaca0ea6144 256 SUPERFAMILY SSF52540 9 243 2.28E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3508 4600ce02bc351d399b0bfeaca0ea6144 256 SMART SM00382 33 243 5.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3508 4600ce02bc351d399b0bfeaca0ea6144 256 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 9 256 1.2E-123 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 TMO_3508 4600ce02bc351d399b0bfeaca0ea6144 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 SUPERFAMILY SSF55785 146 247 1.13E-25 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 SMART SM00086 208 250 1.7E-4 T 14-10-2018 IPR001610 PAC motif TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 SMART SM00086 86 128 3.5E-5 T 14-10-2018 IPR001610 PAC motif TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 480 3.3E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 SUPERFAMILY SSF55785 21 125 1.74E-26 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 Gene3D G3DSA:3.30.450.20 118 240 2.0E-22 T 14-10-2018 TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 Gene3D G3DSA:3.30.450.20 5 117 2.3E-22 T 14-10-2018 TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 Pfam PF08447 PAS fold 36 121 5.7E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 Pfam PF08447 PAS fold 158 243 9.4E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 SUPERFAMILY SSF58104 259 492 8.11E-51 T 14-10-2018 TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 SMART SM00283 246 493 4.9E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 134 1.1E-18 T 14-10-2018 IPR000014 PAS domain TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 249 4.7E-15 T 14-10-2018 IPR000014 PAS domain TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 409 5.7E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 5.7E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 SMART SM00091 137 203 0.57 T 14-10-2018 IPR000014 PAS domain TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 SMART SM00091 13 84 0.21 T 14-10-2018 IPR000014 PAS domain TMO_1270 a9a674dd5bf5217feb4db47a9d4af351 494 Gene3D G3DSA:1.10.287.950 241 494 1.4E-44 T 14-10-2018 TMO_2763 c726e6fe42d4654b488c047f119aaef5 320 Gene3D G3DSA:3.40.50.1980 18 134 4.5E-18 T 14-10-2018 TMO_2763 c726e6fe42d4654b488c047f119aaef5 320 SUPERFAMILY SSF53807 34 297 4.32E-38 T 14-10-2018 TMO_2763 c726e6fe42d4654b488c047f119aaef5 320 Gene3D G3DSA:3.40.50.1980 138 302 5.1E-44 T 14-10-2018 TMO_2763 c726e6fe42d4654b488c047f119aaef5 320 Pfam PF01497 Periplasmic binding protein 38 277 5.7E-22 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain TMO_c0008 66ca028f3ac8585616da84042c4391af 128 Pfam PF04234 CopC domain 26 127 7.4E-23 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 TMO_c0008 66ca028f3ac8585616da84042c4391af 128 Gene3D G3DSA:2.60.40.1220 26 128 3.0E-35 T 14-10-2018 TMO_c0008 66ca028f3ac8585616da84042c4391af 128 SUPERFAMILY SSF81296 25 128 5.46E-29 T 14-10-2018 IPR014756 Immunoglobulin E-set TMO_1821 234775ad526f3876f647ff833775e539 383 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 17 213 6.0E-74 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_1821 234775ad526f3876f647ff833775e539 383 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 15 217 39.469 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_1821 234775ad526f3876f647ff833775e539 383 PIRSF PIRSF001259 16 383 3.6E-124 T 14-10-2018 TMO_1821 234775ad526f3876f647ff833775e539 383 SUPERFAMILY SSF142695 218 380 1.44E-39 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TMO_1821 234775ad526f3876f647ff833775e539 383 Gene3D G3DSA:3.90.870.10 6 220 2.5E-88 T 14-10-2018 TMO_1821 234775ad526f3876f647ff833775e539 383 SUPERFAMILY SSF55821 15 217 6.18E-88 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TMO_1821 234775ad526f3876f647ff833775e539 383 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 21 212 5.5E-84 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_1821 234775ad526f3876f647ff833775e539 383 Pfam PF00925 GTP cyclohydrolase II 229 376 4.6E-31 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TMO_1821 234775ad526f3876f647ff833775e539 383 Gene3D G3DSA:3.40.50.10990 221 379 2.0E-27 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TMO_c0601 c092cfcb082780a212da1cdd943eb1c5 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 88 276 2.7E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_c0601 c092cfcb082780a212da1cdd943eb1c5 377 SUPERFAMILY SSF111369 78 293 2.88E-38 T 14-10-2018 TMO_c0601 c092cfcb082780a212da1cdd943eb1c5 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 369 1.0E-69 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_c0601 c092cfcb082780a212da1cdd943eb1c5 377 Gene3D G3DSA:2.40.420.20 300 367 1.2E-69 T 14-10-2018 TMO_c0601 c092cfcb082780a212da1cdd943eb1c5 377 Gene3D G3DSA:1.10.287.470 120 179 1.2E-69 T 14-10-2018 TMO_c0601 c092cfcb082780a212da1cdd943eb1c5 377 Gene3D G3DSA:2.40.30.170 78 299 1.2E-69 T 14-10-2018 TMO_c0601 c092cfcb082780a212da1cdd943eb1c5 377 Gene3D G3DSA:2.40.50.100 85 213 1.2E-69 T 14-10-2018 TMO_0943 7628de142c6c049df74353c5427b7f99 332 Gene3D G3DSA:3.30.360.10 122 300 4.2E-30 T 14-10-2018 TMO_0943 7628de142c6c049df74353c5427b7f99 332 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 49 101 6.3E-6 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_0943 7628de142c6c049df74353c5427b7f99 332 SUPERFAMILY SSF55347 118 296 4.58E-33 T 14-10-2018 TMO_0943 7628de142c6c049df74353c5427b7f99 332 Gene3D G3DSA:3.40.50.720 1 121 1.1E-16 T 14-10-2018 TMO_0943 7628de142c6c049df74353c5427b7f99 332 SMART SM00859 6 107 1.6E-17 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_0943 7628de142c6c049df74353c5427b7f99 332 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 315 52.905 T 14-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TMO_0943 7628de142c6c049df74353c5427b7f99 332 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 113 129 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TMO_0943 7628de142c6c049df74353c5427b7f99 332 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 315 2.1E-133 T 14-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TMO_0943 7628de142c6c049df74353c5427b7f99 332 SUPERFAMILY SSF51735 5 138 3.28E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0194 930df1bc070009b101f9598f3d5c3fca 309 SMART SM00342 212 295 1.5E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0194 930df1bc070009b101f9598f3d5c3fca 309 Gene3D G3DSA:1.10.10.60 196 304 3.5E-26 T 14-10-2018 TMO_a0194 930df1bc070009b101f9598f3d5c3fca 309 SUPERFAMILY SSF51182 25 70 9.29E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_a0194 930df1bc070009b101f9598f3d5c3fca 309 Pfam PF12852 Cupin 3 179 4.5E-34 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain TMO_a0194 930df1bc070009b101f9598f3d5c3fca 309 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 249 291 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_a0194 930df1bc070009b101f9598f3d5c3fca 309 SUPERFAMILY SSF46689 196 245 5.91E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0194 930df1bc070009b101f9598f3d5c3fca 309 SUPERFAMILY SSF46689 248 297 8.51E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0194 930df1bc070009b101f9598f3d5c3fca 309 Pfam PF12833 Helix-turn-helix domain 218 296 1.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0194 930df1bc070009b101f9598f3d5c3fca 309 Gene3D G3DSA:2.60.120.10 31 95 1.6E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_3225 647114b475baa576a4996a93dd38c2c4 296 Pfam PF03466 LysR substrate binding domain 91 263 1.3E-29 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_3225 647114b475baa576a4996a93dd38c2c4 296 Gene3D G3DSA:1.10.10.10 2 85 1.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3225 647114b475baa576a4996a93dd38c2c4 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.0E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3225 647114b475baa576a4996a93dd38c2c4 296 Gene3D G3DSA:3.40.190.290 91 275 1.2E-26 T 14-10-2018 TMO_3225 647114b475baa576a4996a93dd38c2c4 296 SUPERFAMILY SSF53850 91 263 8.36E-27 T 14-10-2018 TMO_3225 647114b475baa576a4996a93dd38c2c4 296 SUPERFAMILY SSF46785 1 83 1.42E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3225 647114b475baa576a4996a93dd38c2c4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3225 647114b475baa576a4996a93dd38c2c4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3225 647114b475baa576a4996a93dd38c2c4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0051 f49b6a71f60cda239b36dfb4e2500c3e 267 Gene3D G3DSA:1.10.10.60 163 266 3.5E-18 T 14-10-2018 TMO_b0051 f49b6a71f60cda239b36dfb4e2500c3e 267 Gene3D G3DSA:2.60.120.10 18 129 1.3E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_b0051 f49b6a71f60cda239b36dfb4e2500c3e 267 SUPERFAMILY SSF46689 218 263 6.72E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0051 f49b6a71f60cda239b36dfb4e2500c3e 267 SUPERFAMILY SSF51182 15 188 3.03E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_b0051 f49b6a71f60cda239b36dfb4e2500c3e 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 6.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_b0051 f49b6a71f60cda239b36dfb4e2500c3e 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 6.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_b0051 f49b6a71f60cda239b36dfb4e2500c3e 267 Pfam PF02311 AraC-like ligand binding domain 34 111 3.5E-9 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_b0051 f49b6a71f60cda239b36dfb4e2500c3e 267 SMART SM00342 179 261 1.1E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0051 f49b6a71f60cda239b36dfb4e2500c3e 267 Pfam PF12833 Helix-turn-helix domain 185 262 1.8E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2812 28d9b30661d3f9ec33ce21c05736c6dd 346 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 59 339 20.061 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 TMO_2812 28d9b30661d3f9ec33ce21c05736c6dd 346 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 61 338 1.2E-98 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 TMO_2812 28d9b30661d3f9ec33ce21c05736c6dd 346 Pfam PF01040 UbiA prenyltransferase family 76 320 4.5E-59 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 TMO_2812 28d9b30661d3f9ec33ce21c05736c6dd 346 Gene3D G3DSA:1.10.357.140 67 237 6.0E-17 T 14-10-2018 TMO_2812 28d9b30661d3f9ec33ce21c05736c6dd 346 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 113 135 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site TMO_1505 f2a5063fbbca54620c93cb9a0a292e37 277 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 258 1.9E-69 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 TMO_1505 f2a5063fbbca54620c93cb9a0a292e37 277 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 TMO_1505 f2a5063fbbca54620c93cb9a0a292e37 277 Gene3D G3DSA:3.60.10.10 1 259 3.3E-74 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TMO_1505 f2a5063fbbca54620c93cb9a0a292e37 277 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 257 8.1E-71 T 14-10-2018 TMO_1505 f2a5063fbbca54620c93cb9a0a292e37 277 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 251 1.5E-16 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TMO_1505 f2a5063fbbca54620c93cb9a0a292e37 277 SUPERFAMILY SSF56219 1 258 1.11E-80 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TMO_b0350 b20253f6daaa1eac9db7ed2076d1ede6 332 Gene3D G3DSA:3.40.190.10 35 297 8.5E-62 T 14-10-2018 TMO_b0350 b20253f6daaa1eac9db7ed2076d1ede6 332 SUPERFAMILY SSF53850 28 326 1.06E-55 T 14-10-2018 TMO_b0350 b20253f6daaa1eac9db7ed2076d1ede6 332 Pfam PF13343 Bacterial extracellular solute-binding protein 111 290 2.3E-33 T 14-10-2018 TMO_b0350 b20253f6daaa1eac9db7ed2076d1ede6 332 Gene3D G3DSA:3.40.190.10 130 310 8.5E-62 T 14-10-2018 TMO_b0350 b20253f6daaa1eac9db7ed2076d1ede6 332 PIRSF PIRSF002825 4 327 6.5E-69 T 14-10-2018 IPR026045 Ferric binding protein TMO_0540 49068c4ddd1f913cb8d1b38b436691f2 281 Pfam PF00582 Universal stress protein family 158 279 6.4E-12 T 14-10-2018 IPR006016 UspA TMO_0540 49068c4ddd1f913cb8d1b38b436691f2 281 PRINTS PR01438 Universal stress protein signature 241 253 1.0E-8 T 14-10-2018 IPR006015 Universal stress protein A TMO_0540 49068c4ddd1f913cb8d1b38b436691f2 281 PRINTS PR01438 Universal stress protein signature 156 174 1.0E-8 T 14-10-2018 IPR006015 Universal stress protein A TMO_0540 49068c4ddd1f913cb8d1b38b436691f2 281 PRINTS PR01438 Universal stress protein signature 259 281 1.0E-8 T 14-10-2018 IPR006015 Universal stress protein A TMO_0540 49068c4ddd1f913cb8d1b38b436691f2 281 Gene3D G3DSA:3.40.50.12370 5 280 8.7E-34 T 14-10-2018 TMO_0540 49068c4ddd1f913cb8d1b38b436691f2 281 SUPERFAMILY SSF52402 1 145 2.18E-11 T 14-10-2018 TMO_0540 49068c4ddd1f913cb8d1b38b436691f2 281 SUPERFAMILY SSF52402 158 280 2.09E-21 T 14-10-2018 TMO_0663 e483944f5734c2e27b8ebf3e91657d11 235 SUPERFAMILY SSF48008 80 214 4.45E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0663 e483944f5734c2e27b8ebf3e91657d11 235 Gene3D G3DSA:1.10.10.10 6 75 7.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0663 e483944f5734c2e27b8ebf3e91657d11 235 Gene3D G3DSA:1.20.120.530 79 221 5.7E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0663 e483944f5734c2e27b8ebf3e91657d11 235 SMART SM00345 17 74 4.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0663 e483944f5734c2e27b8ebf3e91657d11 235 SUPERFAMILY SSF46785 6 99 2.22E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0663 e483944f5734c2e27b8ebf3e91657d11 235 Pfam PF07729 FCD domain 85 204 2.4E-21 T 14-10-2018 IPR011711 GntR, C-terminal TMO_0663 e483944f5734c2e27b8ebf3e91657d11 235 SMART SM00895 84 205 5.6E-16 T 14-10-2018 IPR011711 GntR, C-terminal TMO_0663 e483944f5734c2e27b8ebf3e91657d11 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 70 4.4E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1027 1c6cd88631da8079c2b21cdb19702885 451 Pfam PF01266 FAD dependent oxidoreductase 30 421 7.2E-64 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_1027 1c6cd88631da8079c2b21cdb19702885 451 SUPERFAMILY SSF51905 29 446 2.94E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0946 25cfd7c13645fd710744afa6e8623acd 374 SUPERFAMILY SSF51735 137 303 2.5E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0946 25cfd7c13645fd710744afa6e8623acd 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.7E-154 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 TMO_0946 25cfd7c13645fd710744afa6e8623acd 374 SUPERFAMILY SSF52283 1 359 5.78E-67 T 14-10-2018 TMO_0946 25cfd7c13645fd710744afa6e8623acd 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.1E-47 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TMO_0946 25cfd7c13645fd710744afa6e8623acd 374 PIRSF PIRSF000183 1 371 5.5E-149 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 TMO_0946 25cfd7c13645fd710744afa6e8623acd 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 351 1.6E-79 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TMO_0946 25cfd7c13645fd710744afa6e8623acd 374 SMART SM01003 4 137 2.1E-80 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TMO_0946 25cfd7c13645fd710744afa6e8623acd 374 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 TMO_0946 25cfd7c13645fd710744afa6e8623acd 374 Gene3D G3DSA:3.40.50.720 4 353 3.3E-137 T 14-10-2018 TMO_0946 25cfd7c13645fd710744afa6e8623acd 374 Gene3D G3DSA:3.40.50.720 130 305 3.3E-137 T 14-10-2018 TMO_0946 25cfd7c13645fd710744afa6e8623acd 374 SMART SM01002 149 297 9.1E-83 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TMO_3346 f2d1a1a5e5443c0adeae3715c0ccb278 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 5 265 2.0E-56 T 14-10-2018 TMO_3346 f2d1a1a5e5443c0adeae3715c0ccb278 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 31 40 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 TMO_3346 f2d1a1a5e5443c0adeae3715c0ccb278 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 5 266 3.9E-53 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 TMO_3346 f2d1a1a5e5443c0adeae3715c0ccb278 268 SUPERFAMILY SSF56219 5 266 3.66E-68 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TMO_3346 f2d1a1a5e5443c0adeae3715c0ccb278 268 Gene3D G3DSA:3.60.10.10 5 266 1.6E-58 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TMO_3346 f2d1a1a5e5443c0adeae3715c0ccb278 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 9 258 7.8E-22 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TMO_b0480 9b58c39626cb4cf333c9448bcf90005b 393 Gene3D G3DSA:3.40.50.300 48 291 1.2E-23 T 14-10-2018 TMO_b0480 9b58c39626cb4cf333c9448bcf90005b 393 SUPERFAMILY SSF52540 89 284 3.01E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0480 9b58c39626cb4cf333c9448bcf90005b 393 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 92 171 3.5E-8 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 PRINTS PR00415 Aconitase family signature 296 309 1.5E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 PRINTS PR00415 Aconitase family signature 173 181 1.5E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 PRINTS PR00415 Aconitase family signature 282 295 1.5E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 PRINTS PR00415 Aconitase family signature 434 445 1.5E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 PRINTS PR00415 Aconitase family signature 206 219 1.5E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 PRINTS PR00415 Aconitase family signature 149 162 1.5E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 PRINTS PR00415 Aconitase family signature 376 390 1.5E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 PRINTS PR00415 Aconitase family signature 496 509 1.5E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 PRINTS PR00415 Aconitase family signature 220 235 1.5E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 SUPERFAMILY SSF52016 634 744 9.61E-33 T 14-10-2018 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 ProSitePatterns PS01244 Aconitase family signature 2. 496 509 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 Gene3D G3DSA:3.30.499.20 9 376 2.4E-162 T 14-10-2018 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 Pfam PF00330 Aconitase family (aconitate hydratase) 77 565 2.2E-187 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 Gene3D G3DSA:1.10.1440.20 594 654 5.1E-21 T 14-10-2018 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 21 750 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 Gene3D G3DSA:3.30.499.10 377 593 8.3E-99 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 Gene3D G3DSA:3.20.19.10 658 754 1.2E-37 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 SUPERFAMILY SSF53732 6 630 9.16E-230 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 Pfam PF00694 Aconitase C-terminal domain 695 742 2.1E-7 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 TMO_3061 621a1d3a0c1bf896811025a3944a1fd3 756 ProSitePatterns PS00450 Aconitase family signature 1. 430 446 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TMO_2797 287a8c618b369c17a578ffe95c1ae402 160 Pfam PF08534 Redoxin 6 157 1.3E-36 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 TMO_2797 287a8c618b369c17a578ffe95c1ae402 160 Gene3D G3DSA:3.40.30.10 1 160 3.8E-61 T 14-10-2018 TMO_2797 287a8c618b369c17a578ffe95c1ae402 160 SUPERFAMILY SSF52833 1 159 3.76E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_1069 ad10f500eaf1a6f8d6ed7d14416cd422 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 303 314 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_1069 ad10f500eaf1a6f8d6ed7d14416cd422 515 Gene3D G3DSA:3.40.605.10 32 501 2.5E-163 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_1069 ad10f500eaf1a6f8d6ed7d14416cd422 515 SUPERFAMILY SSF53720 25 508 5.5E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_1069 ad10f500eaf1a6f8d6ed7d14416cd422 515 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 270 277 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_1069 ad10f500eaf1a6f8d6ed7d14416cd422 515 Pfam PF00171 Aldehyde dehydrogenase family 36 501 6.1E-165 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_1069 ad10f500eaf1a6f8d6ed7d14416cd422 515 Gene3D G3DSA:3.40.309.10 275 473 2.5E-163 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_2686 754f9bd8f098f65fdd479516fa815744 693 SUPERFAMILY SSF48019 279 405 1.45E-25 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TMO_2686 754f9bd8f098f65fdd479516fa815744 693 SUPERFAMILY SSF52540 64 258 2.41E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2686 754f9bd8f098f65fdd479516fa815744 693 Gene3D G3DSA:3.40.50.300 44 213 3.0E-102 T 14-10-2018 TMO_2686 754f9bd8f098f65fdd479516fa815744 693 Gene3D G3DSA:1.10.8.60 39 276 3.0E-102 T 14-10-2018 TMO_2686 754f9bd8f098f65fdd479516fa815744 693 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 268 410 4.5E-45 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 TMO_2686 754f9bd8f098f65fdd479516fa815744 693 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 34 394 3.2E-127 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 TMO_2686 754f9bd8f098f65fdd479516fa815744 693 SMART SM00382 68 215 2.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2686 754f9bd8f098f65fdd479516fa815744 693 Gene3D G3DSA:1.20.272.10 278 397 1.3E-12 T 14-10-2018 TMO_2686 754f9bd8f098f65fdd479516fa815744 693 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 512 638 3.0E-26 T 14-10-2018 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal TMO_2686 754f9bd8f098f65fdd479516fa815744 693 Pfam PF13177 DNA polymerase III, delta subunit 51 214 1.4E-39 T 14-10-2018 TMO_a0556 d219c97868e3e628107384a8d52410ec 272 Gene3D G3DSA:1.10.10.10 23 99 7.8E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0556 d219c97868e3e628107384a8d52410ec 272 SUPERFAMILY SSF46785 25 98 1.11E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0556 d219c97868e3e628107384a8d52410ec 272 SUPERFAMILY SSF55781 91 266 2.94E-29 T 14-10-2018 TMO_a0556 d219c97868e3e628107384a8d52410ec 272 SMART SM00346 25 115 1.8E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_a0556 d219c97868e3e628107384a8d52410ec 272 Pfam PF09339 IclR helix-turn-helix domain 27 78 1.8E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_a0556 d219c97868e3e628107384a8d52410ec 272 Pfam PF01614 Bacterial transcriptional regulator 147 261 1.2E-12 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_a0556 d219c97868e3e628107384a8d52410ec 272 Gene3D G3DSA:3.30.450.40 100 269 3.1E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_a0185 7da1ffa7833927e063732059a3a961f6 312 SUPERFAMILY SSF53850 89 296 3.8E-36 T 14-10-2018 TMO_a0185 7da1ffa7833927e063732059a3a961f6 312 SUPERFAMILY SSF46785 4 112 2.83E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0185 7da1ffa7833927e063732059a3a961f6 312 Pfam PF03466 LysR substrate binding domain 89 292 8.5E-33 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_a0185 7da1ffa7833927e063732059a3a961f6 312 Gene3D G3DSA:3.40.190.290 91 293 6.2E-52 T 14-10-2018 TMO_a0185 7da1ffa7833927e063732059a3a961f6 312 Gene3D G3DSA:1.10.10.10 3 87 3.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0185 7da1ffa7833927e063732059a3a961f6 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0593 04ccef279c5905c2ecf85321a9dce9fb 99 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 5 57 3.7E-17 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TMO_a0593 04ccef279c5905c2ecf85321a9dce9fb 99 Gene3D G3DSA:1.10.1220.10 4 52 2.1E-12 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TMO_a0593 04ccef279c5905c2ecf85321a9dce9fb 99 Pfam PF04221 RelB antitoxin 5 54 5.5E-15 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TMO_c0926 2406479872e0227e96633241178f9b55 277 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 35 262 6.3E-34 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 Pfam PF02491 SHS2 domain inserted in FTSA 95 161 2.6E-17 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 SMART SM00842 9 195 3.7E-73 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 Gene3D G3DSA:3.30.1490.110 84 168 2.9E-94 T 14-10-2018 TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 SUPERFAMILY SSF53067 198 375 3.4E-36 T 14-10-2018 TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 Pfam PF14450 Cell division protein FtsA 207 353 9.8E-21 T 14-10-2018 TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 Gene3D G3DSA:3.30.420.40 196 352 2.9E-94 T 14-10-2018 TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 377 4.0E-101 T 14-10-2018 IPR020823 Cell division protein FtsA TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 SUPERFAMILY SSF53067 8 196 2.85E-48 T 14-10-2018 TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 411 24.916 T 14-10-2018 IPR020823 Cell division protein FtsA TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 Gene3D G3DSA:3.90.640.10 234 300 2.9E-94 T 14-10-2018 TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 PIRSF PIRSF003101 1 411 1.2E-122 T 14-10-2018 IPR020823 Cell division protein FtsA TMO_c0236 18351bc52b7b63cd5daa1fb1e45970e6 411 Gene3D G3DSA:3.30.420.40 12 357 2.9E-94 T 14-10-2018 TMO_3362 d771c062af9d68cdc43b8e262a138204 255 SUPERFAMILY SSF51366 1 252 4.63E-85 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TMO_3362 d771c062af9d68cdc43b8e262a138204 255 Gene3D G3DSA:3.20.20.70 1 255 2.4E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3362 d771c062af9d68cdc43b8e262a138204 255 Pfam PF00977 Histidine biosynthesis protein 5 234 1.7E-89 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 TMO_3362 d771c062af9d68cdc43b8e262a138204 255 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 47.866 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 TMO_3362 d771c062af9d68cdc43b8e262a138204 255 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 1.3E-105 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Pfam PF01103 Surface antigen 456 763 1.1E-75 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 37 763 5.4E-241 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Gene3D G3DSA:3.10.20.310 103 180 5.6E-18 T 14-10-2018 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Gene3D G3DSA:2.40.160.50 433 763 3.4E-101 T 14-10-2018 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Gene3D G3DSA:3.10.20.310 273 355 3.8E-14 T 14-10-2018 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Pfam PF07244 Surface antigen variable number repeat 35 101 4.0E-7 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Pfam PF07244 Surface antigen variable number repeat 358 428 1.2E-13 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Pfam PF07244 Surface antigen variable number repeat 275 353 1.1E-8 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Pfam PF07244 Surface antigen variable number repeat 103 180 5.6E-16 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Pfam PF07244 Surface antigen variable number repeat 184 271 1.3E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Gene3D G3DSA:3.10.20.310 30 102 3.8E-20 T 14-10-2018 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 10 763 24.209 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Gene3D G3DSA:3.10.20.310 357 432 1.7E-22 T 14-10-2018 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 PIRSF PIRSF006076 3 763 5.4E-253 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TMO_1774 bfe9e04b439f4050c2766f3921b36139 763 Gene3D G3DSA:3.10.20.310 184 272 2.1E-21 T 14-10-2018 TMO_b0342 a7d3367bb688369f8bdcff662b5dc03b 159 Gene3D G3DSA:3.30.70.920 63 146 3.4E-27 T 14-10-2018 TMO_b0342 a7d3367bb688369f8bdcff662b5dc03b 159 SUPERFAMILY SSF54909 69 158 8.98E-24 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_b0342 a7d3367bb688369f8bdcff662b5dc03b 159 Pfam PF01037 Lrp/AsnC ligand binding domain 75 148 4.6E-25 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_b0342 a7d3367bb688369f8bdcff662b5dc03b 159 SMART SM00344 9 118 9.5E-52 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_b0342 a7d3367bb688369f8bdcff662b5dc03b 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 27 53 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site TMO_b0342 a7d3367bb688369f8bdcff662b5dc03b 159 Gene3D G3DSA:1.10.10.10 2 62 6.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0342 a7d3367bb688369f8bdcff662b5dc03b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 7.2E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_b0342 a7d3367bb688369f8bdcff662b5dc03b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 7.2E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_b0342 a7d3367bb688369f8bdcff662b5dc03b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 7.2E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_b0342 a7d3367bb688369f8bdcff662b5dc03b 159 SUPERFAMILY SSF46785 9 68 1.07E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0342 a7d3367bb688369f8bdcff662b5dc03b 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 56 1.5E-20 T 14-10-2018 TMO_2167 c133754226a27c21d8f3a5b7c0e973bd 341 SUPERFAMILY SSF51735 2 328 5.67E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2167 c133754226a27c21d8f3a5b7c0e973bd 341 Gene3D G3DSA:3.40.50.720 1 332 1.4E-82 T 14-10-2018 TMO_2167 c133754226a27c21d8f3a5b7c0e973bd 341 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 195 2.1E-23 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TMO_2578 341d71fde31afcdcf961bf5f5be4cf6e 397 Gene3D G3DSA:3.40.47.10 130 393 3.1E-140 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2578 341d71fde31afcdcf961bf5f5be4cf6e 397 Pfam PF02803 Thiolase, C-terminal domain 273 394 3.1E-43 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_2578 341d71fde31afcdcf961bf5f5be4cf6e 397 SUPERFAMILY SSF53901 8 273 3.01E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2578 341d71fde31afcdcf961bf5f5be4cf6e 397 ProSitePatterns PS00099 Thiolases active site. 377 390 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 TMO_2578 341d71fde31afcdcf961bf5f5be4cf6e 397 PIRSF PIRSF000429 2 397 9.4E-111 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_2578 341d71fde31afcdcf961bf5f5be4cf6e 397 Pfam PF00108 Thiolase, N-terminal domain 8 265 9.1E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_2578 341d71fde31afcdcf961bf5f5be4cf6e 397 SUPERFAMILY SSF53901 274 395 7.81E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2578 341d71fde31afcdcf961bf5f5be4cf6e 397 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 394 4.9E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_2578 341d71fde31afcdcf961bf5f5be4cf6e 397 Gene3D G3DSA:3.40.47.10 9 279 3.1E-140 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 SUPERFAMILY SSF64484 17 1373 0.0 T 14-10-2018 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:2.40.50.100 1146 1211 1.7E-63 T 14-10-2018 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:1.10.132.30 641 787 4.9E-62 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:2.40.50.100 945 1019 2.5E-23 T 14-10-2018 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:1.10.274.100 562 640 6.6E-14 T 14-10-2018 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF04983 RNA polymerase Rpb1, domain 3 491 644 4.8E-25 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:1.10.1790.20 1130 1324 1.7E-63 T 14-10-2018 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:1.10.40.90 376 418 8.5E-22 T 14-10-2018 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF04998 RNA polymerase Rpb1, domain 5 763 1323 1.1E-72 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF00623 RNA polymerase Rpb1, domain 2 346 396 4.7E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF00623 RNA polymerase Rpb1, domain 2 394 487 2.2E-26 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:1.10.274.100 492 561 6.8E-22 T 14-10-2018 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 344 2.5E-90 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 759 5.1E-17 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:2.40.50.100 1020 1121 9.9E-27 T 14-10-2018 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1375 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 SMART SM00663 237 516 1.7E-183 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:1.10.150.390 1326 1388 1.5E-26 T 14-10-2018 TMO_2638 a10f844b32e9af775e62dc0513edf7be 1411 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1387 18.874 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_0769 f4269e80a80b6baa70a63e58144b8266 183 SUPERFAMILY SSF50475 22 176 1.08E-40 T 14-10-2018 TMO_0769 f4269e80a80b6baa70a63e58144b8266 183 SMART SM00903 30 178 6.3E-47 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_0769 f4269e80a80b6baa70a63e58144b8266 183 Pfam PF01613 Flavin reductase like domain 30 179 4.1E-33 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_0769 f4269e80a80b6baa70a63e58144b8266 183 Gene3D G3DSA:2.30.110.10 10 181 3.3E-43 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_1396 8af8f8d8e7110eb5b74a565f38cd3422 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 123 136 2.2E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1396 8af8f8d8e7110eb5b74a565f38cd3422 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.2E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1396 8af8f8d8e7110eb5b74a565f38cd3422 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 2.2E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1396 8af8f8d8e7110eb5b74a565f38cd3422 245 Gene3D G3DSA:1.10.150.240 25 107 9.5E-25 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TMO_1396 8af8f8d8e7110eb5b74a565f38cd3422 245 Gene3D G3DSA:3.40.50.1000 13 228 9.5E-25 T 14-10-2018 IPR023214 HAD superfamily TMO_1396 8af8f8d8e7110eb5b74a565f38cd3422 245 Pfam PF00702 haloacid dehalogenase-like hydrolase 10 204 7.3E-12 T 14-10-2018 TMO_1396 8af8f8d8e7110eb5b74a565f38cd3422 245 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 124 204 3.4E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1396 8af8f8d8e7110eb5b74a565f38cd3422 245 SUPERFAMILY SSF56784 8 240 2.94E-34 T 14-10-2018 IPR036412 HAD-like superfamily TMO_2973 b4f8615dc88d178e9874ad5332ba5717 227 Gene3D G3DSA:2.30.110.10 1 209 5.3E-65 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_2973 b4f8615dc88d178e9874ad5332ba5717 227 Pfam PF01613 Flavin reductase like domain 22 163 4.7E-17 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_2973 b4f8615dc88d178e9874ad5332ba5717 227 SMART SM00903 19 173 1.2E-16 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_2973 b4f8615dc88d178e9874ad5332ba5717 227 SUPERFAMILY SSF50475 3 197 3.93E-43 T 14-10-2018 TMO_0598 cc1c6c4653a5e4db38a8e2c2a6f1f065 226 SUPERFAMILY SSF51161 2 198 5.96E-27 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_0598 cc1c6c4653a5e4db38a8e2c2a6f1f065 226 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 117 2.6E-4 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_0598 cc1c6c4653a5e4db38a8e2c2a6f1f065 226 Gene3D G3DSA:2.160.10.10 90 198 8.0E-20 T 14-10-2018 TMO_3366 ecc3505482893bb25745da1bce06c668 456 Pfam PF00175 Oxidoreductase NAD-binding domain 337 434 9.1E-7 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TMO_3366 ecc3505482893bb25745da1bce06c668 456 Pfam PF01794 Ferric reductase like transmembrane component 71 187 4.7E-12 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain TMO_3366 ecc3505482893bb25745da1bce06c668 456 Pfam PF08022 FAD-binding domain 239 306 4.2E-9 T 14-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 TMO_3366 ecc3505482893bb25745da1bce06c668 456 SUPERFAMILY SSF52343 312 451 1.02E-23 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_3366 ecc3505482893bb25745da1bce06c668 456 Gene3D G3DSA:3.40.50.80 326 456 1.2E-23 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_3366 ecc3505482893bb25745da1bce06c668 456 SUPERFAMILY SSF63380 232 323 6.63E-15 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TMO_3366 ecc3505482893bb25745da1bce06c668 456 Gene3D G3DSA:2.40.30.10 226 321 7.7E-14 T 14-10-2018 TMO_c0015 299acf65064fcfb65f274db17bba2a30 115 SMART SM00418 15 95 3.1E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_c0015 299acf65064fcfb65f274db17bba2a30 115 Gene3D G3DSA:1.10.10.10 5 99 3.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0015 299acf65064fcfb65f274db17bba2a30 115 Pfam PF12840 Helix-turn-helix domain 16 75 2.9E-15 T 14-10-2018 TMO_c0015 299acf65064fcfb65f274db17bba2a30 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 3.9E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_c0015 299acf65064fcfb65f274db17bba2a30 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 3.9E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_c0015 299acf65064fcfb65f274db17bba2a30 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 3.9E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_c0015 299acf65064fcfb65f274db17bba2a30 115 SUPERFAMILY SSF46785 3 99 3.45E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0707 e1b089bb8d025a2edf43bc2d07b7992c 267 SUPERFAMILY SSF51735 1 251 4.99E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0707 e1b089bb8d025a2edf43bc2d07b7992c 267 Pfam PF01370 NAD dependent epimerase/dehydratase family 42 184 5.3E-8 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TMO_0707 e1b089bb8d025a2edf43bc2d07b7992c 267 Gene3D G3DSA:3.40.50.720 1 260 2.1E-27 T 14-10-2018 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 874 892 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 29 47 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 311 403 3.14E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 962 980 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 341 359 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 710 835 7.43E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 428 550 3.0E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 203 284 6.7E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR00313 NodO calcium binding signature 3 14 9.7E-7 T 14-10-2018 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR00313 NodO calcium binding signature 33 41 9.7E-7 T 14-10-2018 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR00313 NodO calcium binding signature 354 363 9.7E-7 T 14-10-2018 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR00313 NodO calcium binding signature 336 344 9.7E-7 T 14-10-2018 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 596 738 2.47E-20 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 262 280 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 165 298 1.18E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 551 635 1.3E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 61 123 8.8E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 124 202 3.6E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 104 122 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 884 988 1.5E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 693 714 3.1E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 948 969 3.1E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 168 185 4.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 446 454 23.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1027 1043 0.5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 701 717 0.077 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 32 49 0.065 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 842 858 1.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 789 804 0.35 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 947 964 0.068 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 965 980 0.073 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 327 343 15.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 90 106 0.96 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 187 201 2.9 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 266 281 0.27 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 878 892 0.23 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 525 541 6.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 771 788 0.34 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1045 1061 9.0E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 6 22 4.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 511 523 23.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 665 681 1.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 615 631 3.8 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 684 700 0.37 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 108 122 5.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 247 264 0.077 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 860 876 1.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 930 946 12.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 3 63 1.14E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 636 716 4.0E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 973 1063 1.44E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 689 707 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 418 569 8.5E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 1010 1065 2.5E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 832 922 1.3E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 923 1009 2.2E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 20 38 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 953 971 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1041 1059 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 285 388 5.6E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 3 59 1.4E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 717 826 2.3E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 698 716 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 777 795 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 74 147 1.83E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 786 804 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0627 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 865 883 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0569 32b57dadbf32e8dc7e9523ea06ccf3af 128 Gene3D G3DSA:3.30.300.20 3 128 3.2E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_0569 32b57dadbf32e8dc7e9523ea06ccf3af 128 Pfam PF02566 OsmC-like protein 34 125 1.7E-14 T 14-10-2018 IPR003718 OsmC/Ohr family TMO_0569 32b57dadbf32e8dc7e9523ea06ccf3af 128 SUPERFAMILY SSF82784 10 127 1.96E-31 T 14-10-2018 IPR036102 OsmC/Ohr superfamily TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 13 937 0.0 T 14-10-2018 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Gene3D G3DSA:2.120.10.90 526 785 1.8E-71 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Gene3D G3DSA:3.90.199.10 38 516 2.1E-218 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 SUPERFAMILY SSF101904 528 947 1.31E-94 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 499 5.6E-150 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 716 763 7.0E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 841 887 7.9E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 669 713 2.2E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 534 580 1.5E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 892 937 9.5E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 585 632 1.6E-5 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Gene3D G3DSA:1.10.268.10 374 488 2.1E-218 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Gene3D G3DSA:3.30.1360.40 241 337 2.1E-218 T 14-10-2018 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 SMART SM00434 16 494 6.2E-267 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 10 939 23.553 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 SUPERFAMILY SSF56719 36 516 4.71E-172 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TMO_1570 9f52d379a018a53e4bb6b973288a8063 978 Gene3D G3DSA:2.120.10.90 825 939 1.7E-29 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TMO_0125 45c967b0e78d2d88239cd5ce966697bb 290 SUPERFAMILY SSF48179 184 284 1.45E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_0125 45c967b0e78d2d88239cd5ce966697bb 290 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 182 207 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_0125 45c967b0e78d2d88239cd5ce966697bb 290 PIRSF PIRSF000105 1 288 2.2E-81 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 TMO_0125 45c967b0e78d2d88239cd5ce966697bb 290 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 281 5.4E-34 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_0125 45c967b0e78d2d88239cd5ce966697bb 290 Gene3D G3DSA:1.10.1040.50 189 290 1.1E-34 T 14-10-2018 TMO_0125 45c967b0e78d2d88239cd5ce966697bb 290 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 4 182 3.0E-60 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_0125 45c967b0e78d2d88239cd5ce966697bb 290 Gene3D G3DSA:3.40.50.720 1 188 1.4E-65 T 14-10-2018 TMO_0125 45c967b0e78d2d88239cd5ce966697bb 290 SUPERFAMILY SSF51735 1 184 1.35E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2653 840eb0d64fa5ac352ecc0595954fe6d0 618 SMART SM00382 391 577 3.4E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2653 840eb0d64fa5ac352ecc0595954fe6d0 618 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2653 840eb0d64fa5ac352ecc0595954fe6d0 618 Pfam PF00664 ABC transporter transmembrane region 44 319 7.8E-37 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_2653 840eb0d64fa5ac352ecc0595954fe6d0 618 Pfam PF00005 ABC transporter 382 531 6.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2653 840eb0d64fa5ac352ecc0595954fe6d0 618 Gene3D G3DSA:1.20.1560.10 30 355 1.2E-117 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_2653 840eb0d64fa5ac352ecc0595954fe6d0 618 Gene3D G3DSA:3.40.50.300 356 614 4.8E-90 T 14-10-2018 TMO_2653 840eb0d64fa5ac352ecc0595954fe6d0 618 SUPERFAMILY SSF52540 355 601 1.55E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2653 840eb0d64fa5ac352ecc0595954fe6d0 618 SUPERFAMILY SSF90123 25 354 8.89E-61 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_0134 d3affc8efc9af4e57774d10ed876fe2d 240 SUPERFAMILY SSF69593 7 226 4.18E-37 T 14-10-2018 TMO_0134 d3affc8efc9af4e57774d10ed876fe2d 240 SMART SM00563 70 185 9.1E-29 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TMO_0134 d3affc8efc9af4e57774d10ed876fe2d 240 Pfam PF01553 Acyltransferase 56 182 9.2E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TMO_0993 112db5ae2a54691d263a0aa1f2a3f1d8 330 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 120 284 7.0E-28 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 TMO_0993 112db5ae2a54691d263a0aa1f2a3f1d8 330 Gene3D G3DSA:3.40.50.2000 143 322 3.9E-39 T 14-10-2018 TMO_0993 112db5ae2a54691d263a0aa1f2a3f1d8 330 SUPERFAMILY SSF53756 1 321 3.35E-53 T 14-10-2018 TMO_0993 112db5ae2a54691d263a0aa1f2a3f1d8 330 Gene3D G3DSA:3.40.50.2000 2 142 1.7E-7 T 14-10-2018 TMO_c0246 1a639ae3b1790aee3df4233d9d61d857 490 Pfam PF08245 Mur ligase middle domain 103 307 3.2E-43 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TMO_c0246 1a639ae3b1790aee3df4233d9d61d857 490 SUPERFAMILY SSF53623 94 324 2.52E-63 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_c0246 1a639ae3b1790aee3df4233d9d61d857 490 Gene3D G3DSA:3.40.1190.10 95 331 5.6E-63 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_c0246 1a639ae3b1790aee3df4233d9d61d857 490 Pfam PF01225 Mur ligase family, catalytic domain 20 93 5.1E-12 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TMO_c0246 1a639ae3b1790aee3df4233d9d61d857 490 Gene3D G3DSA:3.90.190.20 334 482 1.9E-54 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TMO_c0246 1a639ae3b1790aee3df4233d9d61d857 490 Gene3D G3DSA:3.40.1390.10 3 94 2.2E-21 T 14-10-2018 TMO_c0246 1a639ae3b1790aee3df4233d9d61d857 490 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 17 477 3.6E-136 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TMO_c0246 1a639ae3b1790aee3df4233d9d61d857 490 SUPERFAMILY SSF63418 11 94 1.22E-20 T 14-10-2018 IPR035911 MurE/MurF, N-terminal TMO_c0246 1a639ae3b1790aee3df4233d9d61d857 490 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 477 31.364 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TMO_c0246 1a639ae3b1790aee3df4233d9d61d857 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 413 3.4E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TMO_c0246 1a639ae3b1790aee3df4233d9d61d857 490 SUPERFAMILY SSF53244 327 478 1.83E-47 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TMO_3464 91172991a4b52048e96124067cefe35c 293 Pfam PF13371 Tetratricopeptide repeat 214 282 3.2E-11 T 14-10-2018 TMO_3464 91172991a4b52048e96124067cefe35c 293 Gene3D G3DSA:1.25.40.10 175 287 6.5E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3464 91172991a4b52048e96124067cefe35c 293 SUPERFAMILY SSF48452 192 264 4.69E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3464 91172991a4b52048e96124067cefe35c 293 Pfam PF13369 Transglutaminase-like superfamily 77 211 1.4E-38 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 239 271 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 301 33.754 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 300 6.0E-81 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 SUPERFAMILY SSF56059 97 297 5.77E-44 T 14-10-2018 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 Gene3D G3DSA:3.40.50.20 1 85 9.9E-29 T 14-10-2018 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 Gene3D G3DSA:3.30.470.20 87 295 1.3E-59 T 14-10-2018 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 Pfam PF01820 D-ala D-ala ligase N-terminus 6 85 7.1E-17 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 SUPERFAMILY SSF52440 4 97 1.06E-30 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 Pfam PF07478 D-ala D-ala ligase C-terminus 128 298 2.1E-39 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 Gene3D G3DSA:3.30.1490.20 112 174 1.3E-59 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 64 75 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 PIRSF PIRSF039102 43 304 8.0E-68 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0238 4711225aa36d6d49fc8e482db8cddc3f 304 PIRSF PIRSF039102 1 49 5.2E-9 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_2480 9315e3125566a4d679ed9613bd9b2638 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 331 350 1.6E-12 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2480 9315e3125566a4d679ed9613bd9b2638 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 383 409 1.6E-12 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2480 9315e3125566a4d679ed9613bd9b2638 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 137 156 1.6E-12 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2480 9315e3125566a4d679ed9613bd9b2638 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 1.6E-12 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2480 9315e3125566a4d679ed9613bd9b2638 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 1.6E-12 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2480 9315e3125566a4d679ed9613bd9b2638 495 Pfam PF00361 Proton-conducting membrane transporter 133 424 1.3E-67 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 Pfam PF04542 Sigma-70 region 2 56 124 1.2E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 80 93 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 51 287 1.4E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 SUPERFAMILY SSF88659 197 293 3.36E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 SUPERFAMILY SSF88946 21 124 4.97E-40 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 Gene3D G3DSA:1.10.601.10 7 123 7.5E-35 T 14-10-2018 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 Gene3D G3DSA:1.20.140.160 141 292 3.7E-16 T 14-10-2018 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 Pfam PF04545 Sigma-70, region 4 237 286 3.9E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 PRINTS PR00046 Major sigma-70 factor signature 104 112 2.7E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 PRINTS PR00046 Major sigma-70 factor signature 275 286 2.7E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 PRINTS PR00046 Major sigma-70 factor signature 260 275 2.7E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 PRINTS PR00046 Major sigma-70 factor signature 241 253 2.7E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 PRINTS PR00046 Major sigma-70 factor signature 80 93 2.7E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 Pfam PF00140 Sigma-70 factor, region 1.2 23 50 4.6E-7 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_c0148 49aad66778e4dd83d99c6e7324e22e3a 305 PIRSF PIRSF000770 21 300 2.1E-37 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_a0444 0126d0f0f1899819b44c1521d0d541ee 307 SUPERFAMILY SSF51621 11 253 4.39E-64 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_a0444 0126d0f0f1899819b44c1521d0d541ee 307 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 14 242 1.4E-41 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_a0444 0126d0f0f1899819b44c1521d0d541ee 307 PIRSF PIRSF015582 2 307 2.3E-84 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like TMO_a0444 0126d0f0f1899819b44c1521d0d541ee 307 Gene3D G3DSA:3.20.20.60 2 307 2.7E-102 T 14-10-2018 TMO_c0440 0c375b649b973376ca0d92eb6559aced 415 SUPERFAMILY SSF56300 1 287 1.5E-44 T 14-10-2018 TMO_c0440 0c375b649b973376ca0d92eb6559aced 415 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 252 8.0E-52 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 TMO_c0440 0c375b649b973376ca0d92eb6559aced 415 Pfam PF00149 Calcineurin-like phosphoesterase 1 225 7.7E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TMO_c0440 0c375b649b973376ca0d92eb6559aced 415 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 296 382 7.9E-10 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain TMO_c0440 0c375b649b973376ca0d92eb6559aced 415 Gene3D G3DSA:3.60.21.10 1 276 6.6E-70 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like TMO_a0452 bf7f2222d6d312b1a74ae6a3e43f9a13 381 Gene3D G3DSA:2.40.110.10 125 236 1.2E-38 T 14-10-2018 TMO_a0452 bf7f2222d6d312b1a74ae6a3e43f9a13 381 Gene3D G3DSA:1.20.140.10 237 381 6.1E-44 T 14-10-2018 TMO_a0452 bf7f2222d6d312b1a74ae6a3e43f9a13 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 379 1.2E-43 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_a0452 bf7f2222d6d312b1a74ae6a3e43f9a13 381 SUPERFAMILY SSF56645 6 244 4.06E-75 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_a0452 bf7f2222d6d312b1a74ae6a3e43f9a13 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 122 1.2E-28 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_a0452 bf7f2222d6d312b1a74ae6a3e43f9a13 381 Gene3D G3DSA:1.10.540.10 1 124 8.7E-36 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_a0452 bf7f2222d6d312b1a74ae6a3e43f9a13 381 SUPERFAMILY SSF47203 229 379 2.09E-42 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_a0452 bf7f2222d6d312b1a74ae6a3e43f9a13 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 219 4.0E-23 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_a0452 bf7f2222d6d312b1a74ae6a3e43f9a13 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 128 140 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_0562 1ce7b8b58a47632b2d5364bae29f973c 96 SUPERFAMILY SSF89447 8 72 5.07E-13 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily TMO_0562 1ce7b8b58a47632b2d5364bae29f973c 96 SMART SM00966 12 52 9.8E-5 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TMO_0562 1ce7b8b58a47632b2d5364bae29f973c 96 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 12 50 1.0E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TMO_0562 1ce7b8b58a47632b2d5364bae29f973c 96 Gene3D G3DSA:2.10.260.10 6 80 2.1E-13 T 14-10-2018 TMO_1947 e5b328953e2370e658c0408634953008 408 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 18 381 2.0E-76 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 TMO_1947 e5b328953e2370e658c0408634953008 408 SUPERFAMILY SSF103473 14 402 1.83E-59 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_1947 e5b328953e2370e658c0408634953008 408 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 3.8E-5 T 14-10-2018 TMO_1947 e5b328953e2370e658c0408634953008 408 PRINTS PR01036 Tetracycline resistance protein TetB signature 143 167 3.8E-5 T 14-10-2018 TMO_1947 e5b328953e2370e658c0408634953008 408 PRINTS PR01036 Tetracycline resistance protein TetB signature 264 289 3.8E-5 T 14-10-2018 TMO_1947 e5b328953e2370e658c0408634953008 408 PRINTS PR01036 Tetracycline resistance protein TetB signature 113 133 3.8E-5 T 14-10-2018 TMO_1947 e5b328953e2370e658c0408634953008 408 Pfam PF07690 Major Facilitator Superfamily 23 363 1.0E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_1947 e5b328953e2370e658c0408634953008 408 Gene3D G3DSA:1.20.1720.10 20 397 2.9E-89 T 14-10-2018 TMO_2934 d47303a3d50da288fc6db7622b4045bf 274 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 11 200 3.4E-78 T 14-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 TMO_2934 d47303a3d50da288fc6db7622b4045bf 274 SUPERFAMILY SSF52540 2 227 5.43E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2934 d47303a3d50da288fc6db7622b4045bf 274 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2934 d47303a3d50da288fc6db7622b4045bf 274 Gene3D G3DSA:3.40.50.300 1 253 1.2E-71 T 14-10-2018 TMO_2934 d47303a3d50da288fc6db7622b4045bf 274 SMART SM00382 27 214 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2934 d47303a3d50da288fc6db7622b4045bf 274 Pfam PF00005 ABC transporter 18 166 1.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 SUPERFAMILY SSF53335 221 355 3.88E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Pfam PF00550 Phosphopantetheine attachment site 820 883 2.2E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Gene3D G3DSA:3.40.50.150 206 344 3.8E-26 T 14-10-2018 TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Pfam PF13847 Methyltransferase domain 223 331 5.0E-12 T 14-10-2018 IPR025714 Methyltransferase domain TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 SUPERFAMILY SSF56801 22 796 3.3E-112 T 14-10-2018 TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 SMART SM00823 Phosphopantetheine attachment site 817 887 1.7E-11 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 SMART SM00824 Thioesterase 907 1156 1.2E-4 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Gene3D G3DSA:3.40.50.1820 894 1158 5.6E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Gene3D G3DSA:1.10.1200.10 802 893 1.2E-23 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Gene3D G3DSA:3.40.50.12780 401 705 7.6E-78 T 14-10-2018 TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Gene3D G3DSA:3.40.50.12780 9 191 1.2E-23 T 14-10-2018 TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Pfam PF00975 Thioesterase domain 905 1144 7.3E-23 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 ProSitePatterns PS00455 Putative AMP-binding domain signature. 447 458 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 ProSitePatterns PS00012 Phosphopantetheine attachment site. 842 857 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 SUPERFAMILY SSF47336 813 884 3.14E-17 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 SUPERFAMILY SSF53474 888 1156 8.88E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Pfam PF13193 AMP-binding enzyme C-terminal domain 719 787 1.6E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Pfam PF00501 AMP-binding enzyme 434 711 3.7E-61 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Pfam PF00501 AMP-binding enzyme 35 175 4.5E-17 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0001 fd6185271a82cf6a2a7b8bfd5a09ed8b 1166 Gene3D G3DSA:3.30.300.30 706 801 5.3E-25 T 14-10-2018 TMO_c0548 7dc1f580c71f04d5e737c4d9910eda86 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 209 221 3.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0548 7dc1f580c71f04d5e737c4d9910eda86 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 209 3.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0548 7dc1f580c71f04d5e737c4d9910eda86 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 193 3.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0548 7dc1f580c71f04d5e737c4d9910eda86 238 SUPERFAMILY SSF55781 21 164 5.4E-10 T 14-10-2018 TMO_c0548 7dc1f580c71f04d5e737c4d9910eda86 238 ProSitePatterns PS00622 LuxR-type HTH domain signature. 193 220 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0548 7dc1f580c71f04d5e737c4d9910eda86 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 231 4.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0548 7dc1f580c71f04d5e737c4d9910eda86 238 Gene3D G3DSA:3.30.450.40 7 175 2.0E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_c0548 7dc1f580c71f04d5e737c4d9910eda86 238 SUPERFAMILY SSF46894 163 235 1.73E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_c0548 7dc1f580c71f04d5e737c4d9910eda86 238 SMART SM00421 176 233 8.3E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0548 7dc1f580c71f04d5e737c4d9910eda86 238 Gene3D G3DSA:1.10.10.10 176 237 1.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 255 374 6.8E-16 T 14-10-2018 IPR000014 PAS domain TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 Gene3D G3DSA:3.30.450.20 379 528 5.8E-12 T 14-10-2018 TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 Gene3D G3DSA:1.10.287.130 529 612 2.0E-18 T 14-10-2018 TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 SMART SM00091 388 449 260.0 T 14-10-2018 IPR000014 PAS domain TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 SMART SM00091 257 324 2.2E-6 T 14-10-2018 IPR000014 PAS domain TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 SUPERFAMILY SSF55785 385 518 5.76E-7 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 SMART SM00387 654 772 4.1E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 SUPERFAMILY SSF55785 260 369 3.38E-20 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 SUPERFAMILY SSF55874 599 770 1.57E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 Pfam PF08448 PAS fold 275 370 3.0E-9 T 14-10-2018 IPR013656 PAS fold-4 TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 SUPERFAMILY SSF47384 526 610 8.44E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 706 4.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 PRINTS PR00344 Bacterial sensor protein C-terminal signature 727 745 4.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 PRINTS PR00344 Bacterial sensor protein C-terminal signature 756 769 4.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 Pfam PF00512 His Kinase A (phospho-acceptor) domain 541 609 4.9E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 Gene3D G3DSA:3.30.565.10 616 773 1.7E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 SMART SM00388 540 609 4.0E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 Pfam PF13188 PAS domain 392 421 0.062 T 14-10-2018 IPR000014 PAS domain TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 Gene3D G3DSA:3.30.450.20 248 367 6.5E-18 T 14-10-2018 TMO_c0374 e492f354790b5cec2db7ccf48ab773ad 774 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 657 770 2.6E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0929 e6310b64c5076da7821442a8fc949fba 488 SUPERFAMILY SSF47413 4 64 3.49E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0929 e6310b64c5076da7821442a8fc949fba 488 SMART SM00530 9 64 8.1E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_0929 e6310b64c5076da7821442a8fc949fba 488 Pfam PF06114 IrrE N-terminal-like domain 248 346 1.2E-11 T 14-10-2018 IPR010359 IrrE N-terminal-like domain TMO_0929 e6310b64c5076da7821442a8fc949fba 488 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 348 486 1.1E-34 T 14-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator TMO_0929 e6310b64c5076da7821442a8fc949fba 488 Gene3D G3DSA:1.10.260.40 2 81 2.3E-12 T 14-10-2018 TMO_0929 e6310b64c5076da7821442a8fc949fba 488 Pfam PF13560 Helix-turn-helix domain 7 64 7.3E-12 T 14-10-2018 TMO_b0245 c38d5b17f8ae48cd8aefed9174a7b9bd 581 Pfam PF13175 AAA ATPase domain 1 105 2.0E-17 T 14-10-2018 TMO_b0245 c38d5b17f8ae48cd8aefed9174a7b9bd 581 Pfam PF13175 AAA ATPase domain 145 336 1.0E-14 T 14-10-2018 TMO_b0245 c38d5b17f8ae48cd8aefed9174a7b9bd 581 SUPERFAMILY SSF52540 1 356 3.39E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0245 c38d5b17f8ae48cd8aefed9174a7b9bd 581 Gene3D G3DSA:3.40.50.300 1 360 5.9E-27 T 14-10-2018 TMO_c0242 c917bd1f6c5f16c44b686f09ff3b0e95 373 Pfam PF01098 Cell cycle protein 23 367 1.2E-74 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_2697 841b71228ef29e1f6287d48deb62ed5a 385 Pfam PF02646 RmuC family 103 375 7.4E-57 T 14-10-2018 IPR003798 DNA recombination RmuC TMO_b0472 380190ceedc467ed5d4e7c72b3c476c6 423 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 61 418 5.6E-171 T 14-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like TMO_b0472 380190ceedc467ed5d4e7c72b3c476c6 423 SUPERFAMILY SSF53822 60 419 1.28E-96 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_b0472 380190ceedc467ed5d4e7c72b3c476c6 423 Pfam PF13433 Periplasmic binding protein domain 62 420 8.0E-138 T 14-10-2018 TMO_b0472 380190ceedc467ed5d4e7c72b3c476c6 423 Gene3D G3DSA:3.40.50.2300 63 390 1.2E-135 T 14-10-2018 TMO_b0472 380190ceedc467ed5d4e7c72b3c476c6 423 Gene3D G3DSA:3.40.50.2300 176 409 1.2E-135 T 14-10-2018 TMO_3132 4a1aa976fcd98e02daea8bd82d008848 166 Pfam PF04073 Aminoacyl-tRNA editing domain 24 149 6.7E-27 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_3132 4a1aa976fcd98e02daea8bd82d008848 166 Gene3D G3DSA:3.90.960.10 1 165 5.8E-54 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TMO_3132 4a1aa976fcd98e02daea8bd82d008848 166 SUPERFAMILY SSF55826 4 163 1.16E-45 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 Pfam PF00226 DnaJ domain 15 77 6.7E-28 T 14-10-2018 IPR001623 DnaJ domain TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 SUPERFAMILY SSF46565 10 116 9.29E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 PRINTS PR00625 DnaJ domain signature 52 72 3.8E-31 T 14-10-2018 IPR001623 DnaJ domain TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 PRINTS PR00625 DnaJ domain signature 17 35 3.8E-31 T 14-10-2018 IPR001623 DnaJ domain TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 PRINTS PR00625 DnaJ domain signature 35 50 3.8E-31 T 14-10-2018 IPR001623 DnaJ domain TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 PRINTS PR00625 DnaJ domain signature 72 91 3.8E-31 T 14-10-2018 IPR001623 DnaJ domain TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 Gene3D G3DSA:2.10.230.10 160 220 2.9E-38 T 14-10-2018 TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 SUPERFAMILY SSF49493 129 278 1.96E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 Pfam PF00684 DnaJ central domain 160 220 1.4E-13 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 SMART SM00271 14 72 1.2E-31 T 14-10-2018 IPR001623 DnaJ domain TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 SUPERFAMILY SSF49493 271 359 9.42E-24 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 15 364 6.7E-136 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 Gene3D G3DSA:1.10.287.110 11 126 2.3E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 Gene3D G3DSA:2.60.260.20 130 262 2.9E-38 T 14-10-2018 TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 SUPERFAMILY SSF57938 147 224 1.31E-21 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 ProSitePatterns PS00636 Nt-dnaJ domain signature. 57 76 - T 14-10-2018 IPR018253 DnaJ domain, conserved site TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 Gene3D G3DSA:2.60.260.20 267 374 2.9E-31 T 14-10-2018 TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 Pfam PF01556 DnaJ C terminal domain 134 348 3.4E-44 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal TMO_3475 edbb3bdc587923fdfaedb8eb0b05f0c1 393 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 12 387 42.042 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 TMO_1960 96ee21e67dfb36dbf8a05c8ca22625b5 79 Pfam PF07330 Protein of unknown function (DUF1467) 3 74 4.5E-18 T 14-10-2018 IPR009935 Protein of unknown function DUF1467 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 209 227 3.1E-31 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 183 200 3.1E-31 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 232 249 3.1E-31 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 28 49 3.1E-31 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 72 91 3.1E-31 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 254 272 3.1E-31 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 53 71 3.1E-31 T 14-10-2018 IPR006129 Adhesin B GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 Gene3D G3DSA:3.40.50.1980 185 296 5.2E-39 T 14-10-2018 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 Gene3D G3DSA:3.40.50.1980 27 184 4.0E-53 T 14-10-2018 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 SUPERFAMILY SSF53807 25 297 1.37E-89 T 14-10-2018 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 72 89 2.8E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 262 281 2.8E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 236 254 2.8E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 28 46 2.8E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 183 204 2.8E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 59 72 2.8E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TMO_2734 b2fb1a55038101a321429702b4a596f1 299 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 293 7.2E-73 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TMO_3075 d4809918d1360d3c937179250492953e 239 Gene3D G3DSA:1.20.120.530 93 236 1.8E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_3075 d4809918d1360d3c937179250492953e 239 Pfam PF07729 FCD domain 102 221 2.7E-20 T 14-10-2018 IPR011711 GntR, C-terminal TMO_3075 d4809918d1360d3c937179250492953e 239 SMART SM00345 30 88 3.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3075 d4809918d1360d3c937179250492953e 239 SUPERFAMILY SSF48008 96 230 6.8E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_3075 d4809918d1360d3c937179250492953e 239 Gene3D G3DSA:1.10.10.10 26 89 5.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3075 d4809918d1360d3c937179250492953e 239 SUPERFAMILY SSF46785 23 92 6.1E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3075 d4809918d1360d3c937179250492953e 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 88 6.7E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3075 d4809918d1360d3c937179250492953e 239 SMART SM00895 98 223 5.4E-13 T 14-10-2018 IPR011711 GntR, C-terminal TMO_c0221 e30d4f2bbb4e8fbbcc208bf20690b48e 339 Gene3D G3DSA:1.10.287.470 88 114 7.7E-12 T 14-10-2018 TMO_c0221 e30d4f2bbb4e8fbbcc208bf20690b48e 339 Gene3D G3DSA:1.10.287.470 122 186 1.9E-8 T 14-10-2018 TMO_c0221 e30d4f2bbb4e8fbbcc208bf20690b48e 339 SUPERFAMILY SSF111369 53 114 2.62E-6 T 14-10-2018 TMO_c0221 e30d4f2bbb4e8fbbcc208bf20690b48e 339 Gene3D G3DSA:2.40.50.100 192 245 5.2E-5 T 14-10-2018 TMO_c0221 e30d4f2bbb4e8fbbcc208bf20690b48e 339 SUPERFAMILY SSF111369 125 181 5.23E-5 T 14-10-2018 TMO_c0221 e30d4f2bbb4e8fbbcc208bf20690b48e 339 Pfam PF13437 HlyD family secretion protein 218 300 2.4E-10 T 14-10-2018 TMO_c0221 e30d4f2bbb4e8fbbcc208bf20690b48e 339 Gene3D G3DSA:2.40.30.170 246 336 2.2E-12 T 14-10-2018 TMO_c0221 e30d4f2bbb4e8fbbcc208bf20690b48e 339 SUPERFAMILY SSF111369 190 305 4.45E-7 T 14-10-2018 TMO_c0221 e30d4f2bbb4e8fbbcc208bf20690b48e 339 Gene3D G3DSA:2.40.50.100 54 87 7.7E-12 T 14-10-2018 TMO_c0221 e30d4f2bbb4e8fbbcc208bf20690b48e 339 Pfam PF13533 Biotin-lipoyl like 56 101 7.7E-9 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TMO_a0274 9faa459ef34d4b2e51365c9049b6e01e 163 Pfam PF02082 Transcriptional regulator 1 81 2.9E-23 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type TMO_a0274 9faa459ef34d4b2e51365c9049b6e01e 163 Gene3D G3DSA:1.10.10.10 2 141 3.4E-41 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0274 9faa459ef34d4b2e51365c9049b6e01e 163 SUPERFAMILY SSF46785 4 136 2.58E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2336 bcfa826350ff31c73facebf10a8ed914 236 SUPERFAMILY SSF52402 30 193 1.67E-40 T 14-10-2018 TMO_2336 bcfa826350ff31c73facebf10a8ed914 236 Gene3D G3DSA:3.40.50.620 3 233 5.9E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_2336 bcfa826350ff31c73facebf10a8ed914 236 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 27 228 3.1E-54 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 TMO_2336 bcfa826350ff31c73facebf10a8ed914 236 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 37 204 1.5E-35 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 TMO_2336 bcfa826350ff31c73facebf10a8ed914 236 PIRSF PIRSF000857 1 233 1.8E-72 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 TMO_2441 6f1705d50d784d14a19c2f2640ee351f 159 Pfam PF13787 Protein of unknown function with HXXEE motif 9 116 3.8E-15 T 14-10-2018 IPR025671 Protein of unknown function with HXXEE motif TMO_1292 01bc51b1c5db2e82e8095ac2225d5785 335 Gene3D G3DSA:3.40.50.1360 63 323 5.2E-70 T 14-10-2018 TMO_1292 01bc51b1c5db2e82e8095ac2225d5785 335 Pfam PF08281 Sigma-70, region 4 23 55 8.3E-7 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_1292 01bc51b1c5db2e82e8095ac2225d5785 335 SUPERFAMILY SSF88659 16 57 2.88E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_1292 01bc51b1c5db2e82e8095ac2225d5785 335 SUPERFAMILY SSF100950 74 323 9.07E-58 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_1292 01bc51b1c5db2e82e8095ac2225d5785 335 Pfam PF04198 Putative sugar-binding domain 70 323 1.4E-56 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 TMO_1292 01bc51b1c5db2e82e8095ac2225d5785 335 Gene3D G3DSA:1.10.10.60 13 62 5.1E-11 T 14-10-2018 TMO_3310 0fd261607d8306662d3be8ce59ce7ca7 217 Gene3D G3DSA:3.20.20.70 7 211 2.6E-46 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3310 0fd261607d8306662d3be8ce59ce7ca7 217 SUPERFAMILY SSF51412 8 197 7.48E-25 T 14-10-2018 TMO_3310 0fd261607d8306662d3be8ce59ce7ca7 217 Pfam PF03060 Nitronate monooxygenase 20 192 2.8E-30 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 SUPERFAMILY SSF47819 469 542 2.18E-21 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 Pfam PF09382 RQC domain 339 452 8.3E-36 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 Gene3D G3DSA:1.10.150.80 472 542 3.5E-22 T 14-10-2018 TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 Gene3D G3DSA:1.10.10.10 272 453 3.5E-44 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 SMART SM00490 181 262 8.3E-26 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 Gene3D G3DSA:3.40.50.300 140 271 6.0E-40 T 14-10-2018 TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 Pfam PF00270 DEAD/DEAH box helicase 1 116 5.6E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 1 541 4.8E-211 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 SUPERFAMILY SSF52540 1 276 1.39E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 1 394 3.6E-130 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 Pfam PF00271 Helicase conserved C-terminal domain 157 261 8.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 Pfam PF00570 HRDC domain 476 540 1.2E-20 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 SMART SM00341 470 551 3.8E-15 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 Pfam PF16124 RecQ zinc-binding 275 336 2.2E-18 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 SUPERFAMILY SSF52540 139 390 5.64E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 Gene3D G3DSA:3.40.50.300 1 139 1.5E-50 T 14-10-2018 TMO_2109 6104660c13913c50bfe9fb47b55ca79a 552 SMART SM00956 343 448 1.1E-50 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 TMO_0816 edeec577847c4528abda961d851ac779 331 SUPERFAMILY SSF53474 33 324 1.11E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0816 edeec577847c4528abda961d851ac779 331 Pfam PF12146 Serine aminopeptidase, S33 53 314 4.2E-47 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 TMO_0816 edeec577847c4528abda961d851ac779 331 Gene3D G3DSA:3.40.50.1820 33 329 2.3E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0234 d2692315156e27e5b7cab2233d5fd8d5 502 SUPERFAMILY SSF56801 2 494 1.31E-135 T 14-10-2018 TMO_a0234 d2692315156e27e5b7cab2233d5fd8d5 502 Gene3D G3DSA:3.30.300.310 396 496 8.0E-30 T 14-10-2018 TMO_a0234 d2692315156e27e5b7cab2233d5fd8d5 502 Pfam PF00501 AMP-binding enzyme 8 400 2.8E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0234 d2692315156e27e5b7cab2233d5fd8d5 502 Gene3D G3DSA:3.40.50.12780 1 393 1.9E-98 T 14-10-2018 TMO_a0234 d2692315156e27e5b7cab2233d5fd8d5 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 409 482 3.9E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0234 d2692315156e27e5b7cab2233d5fd8d5 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_1335 4e2f08f3393a577963ec428c0fcf1245 262 SMART SM00382 26 220 4.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1335 4e2f08f3393a577963ec428c0fcf1245 262 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1335 4e2f08f3393a577963ec428c0fcf1245 262 Gene3D G3DSA:3.40.50.300 1 257 3.2E-59 T 14-10-2018 TMO_1335 4e2f08f3393a577963ec428c0fcf1245 262 Pfam PF00005 ABC transporter 18 170 4.9E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1335 4e2f08f3393a577963ec428c0fcf1245 262 SUPERFAMILY SSF52540 2 235 1.57E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1841 211534fe6ca25ab41007c7bb29f834b6 221 Gene3D G3DSA:3.40.50.170 1 207 1.0E-81 T 14-10-2018 TMO_1841 211534fe6ca25ab41007c7bb29f834b6 221 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 194 1.2E-72 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 TMO_1841 211534fe6ca25ab41007c7bb29f834b6 221 Pfam PF00551 Formyl transferase 6 185 5.1E-58 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_1841 211534fe6ca25ab41007c7bb29f834b6 221 SUPERFAMILY SSF53328 6 198 6.02E-62 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_1841 211534fe6ca25ab41007c7bb29f834b6 221 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 191 31.533 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 TMO_0512 3d0fdd951b41499d8cbcc330cdf45063 408 SUPERFAMILY SSF53822 35 394 3.1E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_0512 3d0fdd951b41499d8cbcc330cdf45063 408 Gene3D G3DSA:3.40.50.2300 38 346 1.3E-100 T 14-10-2018 TMO_0512 3d0fdd951b41499d8cbcc330cdf45063 408 Pfam PF13458 Periplasmic binding protein 35 372 5.6E-83 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_0512 3d0fdd951b41499d8cbcc330cdf45063 408 Gene3D G3DSA:3.40.50.2300 154 285 1.3E-100 T 14-10-2018 TMO_c0274 ff8431ff0de9c9f4d631269e75233a4a 204 Gene3D G3DSA:1.20.1050.10 78 185 9.7E-69 T 14-10-2018 TMO_c0274 ff8431ff0de9c9f4d631269e75233a4a 204 SUPERFAMILY SSF52833 1 79 4.53E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0274 ff8431ff0de9c9f4d631269e75233a4a 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 96 185 6.1E-10 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal TMO_c0274 ff8431ff0de9c9f4d631269e75233a4a 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 14 74 7.5E-9 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_c0274 ff8431ff0de9c9f4d631269e75233a4a 204 SUPERFAMILY SSF47616 76 196 2.92E-26 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_c0274 ff8431ff0de9c9f4d631269e75233a4a 204 Gene3D G3DSA:3.40.30.10 3 192 9.7E-69 T 14-10-2018 TMO_b0164 cd93449eb3d10e8b5a400dcde2aec92e 330 Pfam PF03466 LysR substrate binding domain 94 287 1.2E-37 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0164 cd93449eb3d10e8b5a400dcde2aec92e 330 Gene3D G3DSA:3.40.190.10 163 257 1.4E-56 T 14-10-2018 TMO_b0164 cd93449eb3d10e8b5a400dcde2aec92e 330 SUPERFAMILY SSF53850 95 291 1.27E-37 T 14-10-2018 TMO_b0164 cd93449eb3d10e8b5a400dcde2aec92e 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.6E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0164 cd93449eb3d10e8b5a400dcde2aec92e 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.6E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0164 cd93449eb3d10e8b5a400dcde2aec92e 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.6E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0164 cd93449eb3d10e8b5a400dcde2aec92e 330 Gene3D G3DSA:1.10.10.10 6 95 5.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0164 cd93449eb3d10e8b5a400dcde2aec92e 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.4E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0164 cd93449eb3d10e8b5a400dcde2aec92e 330 SUPERFAMILY SSF46785 5 87 2.4E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0164 cd93449eb3d10e8b5a400dcde2aec92e 330 Gene3D G3DSA:3.40.190.10 103 283 1.4E-56 T 14-10-2018 TMO_0726 08932480a102b57131eb89e5f0860c71 194 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 99 186 7.6E-11 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal TMO_0726 08932480a102b57131eb89e5f0860c71 194 SUPERFAMILY SSF48498 81 186 9.69E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_0726 08932480a102b57131eb89e5f0860c71 194 SUPERFAMILY SSF46689 8 52 8.72E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0726 08932480a102b57131eb89e5f0860c71 194 Gene3D G3DSA:1.10.357.10 9 189 4.7E-26 T 14-10-2018 TMO_0726 08932480a102b57131eb89e5f0860c71 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 52 6.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1415 267bfd716ce812693eb7c839c03827f2 277 PRINTS PR00069 Aldo-keto reductase signature 157 186 1.7E-48 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_1415 267bfd716ce812693eb7c839c03827f2 277 PRINTS PR00069 Aldo-keto reductase signature 123 140 1.7E-48 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_1415 267bfd716ce812693eb7c839c03827f2 277 PRINTS PR00069 Aldo-keto reductase signature 92 110 1.7E-48 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_1415 267bfd716ce812693eb7c839c03827f2 277 PRINTS PR00069 Aldo-keto reductase signature 36 60 1.7E-48 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_1415 267bfd716ce812693eb7c839c03827f2 277 PRINTS PR00069 Aldo-keto reductase signature 194 218 1.7E-48 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_1415 267bfd716ce812693eb7c839c03827f2 277 PIRSF PIRSF000097 2 276 2.8E-68 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_1415 267bfd716ce812693eb7c839c03827f2 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 TMO_1415 267bfd716ce812693eb7c839c03827f2 277 Pfam PF00248 Aldo/keto reductase family 17 259 9.1E-58 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_1415 267bfd716ce812693eb7c839c03827f2 277 SUPERFAMILY SSF51430 11 269 6.81E-92 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_1415 267bfd716ce812693eb7c839c03827f2 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 40 57 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 TMO_1415 267bfd716ce812693eb7c839c03827f2 277 Gene3D G3DSA:3.20.20.100 3 276 5.0E-100 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_b0336 549627ea8cf828d53bed77e68c8dc823 105 TIGRFAM TIGR03793 TOMM_pelo: NHLP leader peptide domain 4 78 2.3E-22 T 14-10-2018 IPR022513 Thiazole/oxazole-modified microcins TMO_b0336 549627ea8cf828d53bed77e68c8dc823 105 Gene3D G3DSA:3.90.330.10 8 76 1.6E-7 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0336 549627ea8cf828d53bed77e68c8dc823 105 SUPERFAMILY SSF56209 4 82 3.66E-18 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_c0105 5c1bd63b48b5f838d3f958a48e63af11 180 Pfam PF06114 IrrE N-terminal-like domain 76 174 8.2E-18 T 14-10-2018 IPR010359 IrrE N-terminal-like domain TMO_2617 9f195618911f00e439729ad7a6e31472 177 SUPERFAMILY SSF56053 83 177 5.5E-35 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2617 9f195618911f00e439729ad7a6e31472 177 Gene3D G3DSA:3.90.930.12 1 82 4.6E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2617 9f195618911f00e439729ad7a6e31472 177 Gene3D G3DSA:3.90.930.12 83 177 8.5E-38 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2617 9f195618911f00e439729ad7a6e31472 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.9E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_2617 9f195618911f00e439729ad7a6e31472 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.9E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_2617 9f195618911f00e439729ad7a6e31472 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.9E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_2617 9f195618911f00e439729ad7a6e31472 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2617 9f195618911f00e439729ad7a6e31472 177 PIRSF PIRSF002162 1 177 1.8E-48 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2617 9f195618911f00e439729ad7a6e31472 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.028 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_2617 9f195618911f00e439729ad7a6e31472 177 Pfam PF00347 Ribosomal protein L6 91 164 1.9E-19 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2617 9f195618911f00e439729ad7a6e31472 177 Pfam PF00347 Ribosomal protein L6 11 82 5.3E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2617 9f195618911f00e439729ad7a6e31472 177 SUPERFAMILY SSF56053 1 82 5.52E-26 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2617 9f195618911f00e439729ad7a6e31472 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 8.5E-76 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_b0549 7022432a9e256cce80063daa55622336 395 Gene3D G3DSA:1.20.140.10 243 395 1.3E-37 T 14-10-2018 TMO_b0549 7022432a9e256cce80063daa55622336 395 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 229 3.8E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_b0549 7022432a9e256cce80063daa55622336 395 Gene3D G3DSA:2.40.110.10 137 241 6.7E-37 T 14-10-2018 TMO_b0549 7022432a9e256cce80063daa55622336 395 SUPERFAMILY SSF47203 246 391 1.32E-39 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_b0549 7022432a9e256cce80063daa55622336 395 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 140 152 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_b0549 7022432a9e256cce80063daa55622336 395 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_b0549 7022432a9e256cce80063daa55622336 395 SUPERFAMILY SSF56645 9 240 1.28E-77 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_b0549 7022432a9e256cce80063daa55622336 395 Gene3D G3DSA:1.10.540.10 5 136 2.0E-41 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_b0549 7022432a9e256cce80063daa55622336 395 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 387 2.1E-26 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_b0549 7022432a9e256cce80063daa55622336 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 22 134 1.3E-35 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_1963 959244e07102de1c8a7d6aa352e09bd1 259 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 255 36.63 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TMO_1963 959244e07102de1c8a7d6aa352e09bd1 259 SUPERFAMILY SSF53067 1 123 1.88E-35 T 14-10-2018 TMO_1963 959244e07102de1c8a7d6aa352e09bd1 259 Pfam PF03309 Type III pantothenate kinase 2 207 7.0E-73 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TMO_1963 959244e07102de1c8a7d6aa352e09bd1 259 Gene3D G3DSA:3.30.420.40 1 88 1.1E-30 T 14-10-2018 TMO_1963 959244e07102de1c8a7d6aa352e09bd1 259 SUPERFAMILY SSF53067 125 253 8.03E-40 T 14-10-2018 TMO_1963 959244e07102de1c8a7d6aa352e09bd1 259 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 247 2.7E-69 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TMO_1963 959244e07102de1c8a7d6aa352e09bd1 259 Gene3D G3DSA:3.30.420.40 90 259 1.5E-58 T 14-10-2018 TMO_3016 07f85ad8453a62ad8dfeec438fd23eee 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 316 6.7E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_3016 07f85ad8453a62ad8dfeec438fd23eee 334 SMART SM00382 32 239 1.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3016 07f85ad8453a62ad8dfeec438fd23eee 334 SUPERFAMILY SSF52540 3 252 1.62E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3016 07f85ad8453a62ad8dfeec438fd23eee 334 Pfam PF00005 ABC transporter 24 181 5.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3016 07f85ad8453a62ad8dfeec438fd23eee 334 Gene3D G3DSA:3.40.50.300 1 325 2.7E-93 T 14-10-2018 TMO_3016 07f85ad8453a62ad8dfeec438fd23eee 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 4.6E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_2976 617de68b8df7e85c5dc08bed24f3f168 465 SMART SM00228 91 164 1.8E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_2976 617de68b8df7e85c5dc08bed24f3f168 465 Gene3D G3DSA:3.30.750.44 26 331 2.4E-101 T 14-10-2018 TMO_2976 617de68b8df7e85c5dc08bed24f3f168 465 Pfam PF13180 PDZ domain 91 172 3.3E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_2976 617de68b8df7e85c5dc08bed24f3f168 465 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 43 361 8.4E-102 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 TMO_2976 617de68b8df7e85c5dc08bed24f3f168 465 SUPERFAMILY SSF50156 61 184 1.48E-23 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 TMO_2976 617de68b8df7e85c5dc08bed24f3f168 465 SUPERFAMILY SSF52096 27 360 5.8E-83 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_2976 617de68b8df7e85c5dc08bed24f3f168 465 SMART SM00245 166 356 4.5E-73 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TMO_2976 617de68b8df7e85c5dc08bed24f3f168 465 Gene3D G3DSA:2.30.42.10 91 180 2.4E-101 T 14-10-2018 TMO_2976 617de68b8df7e85c5dc08bed24f3f168 465 Pfam PF03572 Peptidase family S41 191 355 3.1E-57 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TMO_2976 617de68b8df7e85c5dc08bed24f3f168 465 Gene3D G3DSA:3.90.226.10 181 353 2.4E-101 T 14-10-2018 TMO_0498 f06be6ab8f327090d2d2e67fa054880e 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 284 2.8E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_0498 f06be6ab8f327090d2d2e67fa054880e 297 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 3 297 4.9E-103 T 14-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type TMO_a0580 67523fc44afe6eb76a5074ed95383b91 318 Gene3D G3DSA:3.40.50.300 115 178 5.8E-8 T 14-10-2018 TMO_a0580 67523fc44afe6eb76a5074ed95383b91 318 SUPERFAMILY SSF53795 114 172 1.65E-10 T 14-10-2018 TMO_c0857 2641618e2c3d3af3fbd9604deb36b762 324 SUPERFAMILY SSF52540 64 276 1.06E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0857 2641618e2c3d3af3fbd9604deb36b762 324 Gene3D G3DSA:3.40.50.300 102 311 5.4E-13 T 14-10-2018 TMO_2958 2a3b59dd619b9dbe372580c2b2b35451 307 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 285 5.9E-15 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 TMO_2958 2a3b59dd619b9dbe372580c2b2b35451 307 Gene3D G3DSA:1.10.1040.10 162 292 1.3E-23 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_2958 2a3b59dd619b9dbe372580c2b2b35451 307 SUPERFAMILY SSF48179 167 287 1.04E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_2958 2a3b59dd619b9dbe372580c2b2b35451 307 SUPERFAMILY SSF51735 4 165 1.9E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2958 2a3b59dd619b9dbe372580c2b2b35451 307 PIRSF PIRSF000103 1 295 4.4E-69 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 TMO_2958 2a3b59dd619b9dbe372580c2b2b35451 307 Gene3D G3DSA:3.40.50.720 1 160 9.5E-48 T 14-10-2018 TMO_2958 2a3b59dd619b9dbe372580c2b2b35451 307 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 TMO_2958 2a3b59dd619b9dbe372580c2b2b35451 307 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 162 9.9E-39 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 TMO_2747 d43ef424cf6cff3d3e865e0ec03831d9 415 Gene3D G3DSA:3.40.50.150 30 277 4.0E-66 T 14-10-2018 TMO_2747 d43ef424cf6cff3d3e865e0ec03831d9 415 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 52 58 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TMO_2747 d43ef424cf6cff3d3e865e0ec03831d9 415 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 97 117 1.0E-38 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TMO_2747 d43ef424cf6cff3d3e865e0ec03831d9 415 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 231 249 1.0E-38 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TMO_2747 d43ef424cf6cff3d3e865e0ec03831d9 415 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 48 62 1.0E-38 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TMO_2747 d43ef424cf6cff3d3e865e0ec03831d9 415 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 212 229 1.0E-38 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TMO_2747 d43ef424cf6cff3d3e865e0ec03831d9 415 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 254 274 1.0E-38 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TMO_2747 d43ef424cf6cff3d3e865e0ec03831d9 415 Pfam PF01555 DNA methylase 49 270 9.9E-54 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 TMO_2747 d43ef424cf6cff3d3e865e0ec03831d9 415 SUPERFAMILY SSF53335 31 274 7.89E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0276 508b121453963ef71b16b2feaa8870d8 68 Pfam PF01361 Tautomerase enzyme 2 61 4.2E-21 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 TMO_c0276 508b121453963ef71b16b2feaa8870d8 68 SUPERFAMILY SSF55331 2 63 1.55E-21 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily TMO_c0276 508b121453963ef71b16b2feaa8870d8 68 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 63 2.0E-22 T 14-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 TMO_c0276 508b121453963ef71b16b2feaa8870d8 68 Gene3D G3DSA:3.30.429.10 2 65 5.2E-25 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily TMO_0967 fc06ac5bc1c5468f2782eac83bca12b3 269 SMART SM00363 6 68 4.4E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_0967 fc06ac5bc1c5468f2782eac83bca12b3 269 PIRSF PIRSF005578 1 262 2.7E-98 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 TMO_0967 fc06ac5bc1c5468f2782eac83bca12b3 269 Pfam PF01479 S4 domain 7 51 2.1E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_0967 fc06ac5bc1c5468f2782eac83bca12b3 269 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 6.7E-70 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 TMO_0967 fc06ac5bc1c5468f2782eac83bca12b3 269 SUPERFAMILY SSF55174 5 69 2.5E-14 T 14-10-2018 TMO_0967 fc06ac5bc1c5468f2782eac83bca12b3 269 Gene3D G3DSA:3.40.50.150 65 251 2.2E-74 T 14-10-2018 TMO_0967 fc06ac5bc1c5468f2782eac83bca12b3 269 Gene3D G3DSA:3.10.290.10 2 64 7.5E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TMO_0967 fc06ac5bc1c5468f2782eac83bca12b3 269 SUPERFAMILY SSF53335 59 245 1.83E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0967 fc06ac5bc1c5468f2782eac83bca12b3 269 Pfam PF01728 FtsJ-like methyltransferase 62 245 6.5E-21 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 TMO_2559 a3a7c2be0026dd814645e3649a334635 458 Pfam PF00072 Response regulator receiver domain 158 268 5.3E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2559 a3a7c2be0026dd814645e3649a334635 458 Pfam PF00072 Response regulator receiver domain 5 116 4.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2559 a3a7c2be0026dd814645e3649a334635 458 Pfam PF00990 Diguanylate cyclase, GGDEF domain 292 450 1.2E-50 T 14-10-2018 IPR000160 GGDEF domain TMO_2559 a3a7c2be0026dd814645e3649a334635 458 Gene3D G3DSA:3.40.50.12740 1 289 2.3E-92 T 14-10-2018 TMO_2559 a3a7c2be0026dd814645e3649a334635 458 Gene3D G3DSA:3.30.70.270 290 456 7.2E-60 T 14-10-2018 TMO_2559 a3a7c2be0026dd814645e3649a334635 458 SUPERFAMILY SSF55073 297 454 4.16E-52 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_2559 a3a7c2be0026dd814645e3649a334635 458 SMART SM00267 282 455 3.2E-59 T 14-10-2018 IPR000160 GGDEF domain TMO_2559 a3a7c2be0026dd814645e3649a334635 458 SUPERFAMILY SSF52172 152 287 3.42E-29 T 14-10-2018 IPR011006 CheY-like superfamily TMO_2559 a3a7c2be0026dd814645e3649a334635 458 SUPERFAMILY SSF52172 2 134 2.85E-41 T 14-10-2018 IPR011006 CheY-like superfamily TMO_2559 a3a7c2be0026dd814645e3649a334635 458 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 291 451 2.3E-53 T 14-10-2018 IPR000160 GGDEF domain TMO_2559 a3a7c2be0026dd814645e3649a334635 458 SMART SM00448 3 116 1.4E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2559 a3a7c2be0026dd814645e3649a334635 458 SMART SM00448 156 268 1.4E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0854 6808f0b1ee5f272902de625be701cc37 284 SUPERFAMILY SSF56281 6 274 1.43E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_0854 6808f0b1ee5f272902de625be701cc37 284 Gene3D G3DSA:3.60.15.10 5 280 2.5E-51 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_0854 6808f0b1ee5f272902de625be701cc37 284 SMART SM00849 28 217 0.0056 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_0854 6808f0b1ee5f272902de625be701cc37 284 Pfam PF12706 Beta-lactamase superfamily domain 39 240 1.5E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_b0438 c4fee4df1d26e5b6e14007cb98dea1f0 371 Gene3D G3DSA:2.60.120.10 12 369 2.9E-125 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_b0438 c4fee4df1d26e5b6e14007cb98dea1f0 371 Pfam PF07883 Cupin domain 273 339 4.8E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_b0438 c4fee4df1d26e5b6e14007cb98dea1f0 371 Pfam PF07883 Cupin domain 100 161 1.7E-14 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_b0438 c4fee4df1d26e5b6e14007cb98dea1f0 371 SUPERFAMILY SSF51182 13 359 7.8E-107 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_a0128 c1064788478bfcf6727eb58571a55e1a 270 Pfam PF00005 ABC transporter 22 182 6.7E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0128 c1064788478bfcf6727eb58571a55e1a 270 SUPERFAMILY SSF52540 3 259 2.56E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0128 c1064788478bfcf6727eb58571a55e1a 270 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0128 c1064788478bfcf6727eb58571a55e1a 270 Gene3D G3DSA:3.40.50.300 3 269 8.5E-81 T 14-10-2018 TMO_a0128 c1064788478bfcf6727eb58571a55e1a 270 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 263 4.1E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_a0128 c1064788478bfcf6727eb58571a55e1a 270 SMART SM00382 31 232 5.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1560 2f22fee8e633e409a6b2082e66145880 298 Gene3D G3DSA:3.40.190.290 99 298 6.3E-14 T 14-10-2018 TMO_1560 2f22fee8e633e409a6b2082e66145880 298 Gene3D G3DSA:1.10.10.10 8 91 1.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1560 2f22fee8e633e409a6b2082e66145880 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 1.4E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1560 2f22fee8e633e409a6b2082e66145880 298 Pfam PF03466 LysR substrate binding domain 95 296 2.3E-23 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1560 2f22fee8e633e409a6b2082e66145880 298 SUPERFAMILY SSF46785 10 95 7.34E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1560 2f22fee8e633e409a6b2082e66145880 298 SUPERFAMILY SSF53850 96 296 1.28E-21 T 14-10-2018 TMO_2193 0cacc2013cee4bedd237de9516480750 90 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 83 3.2E-12 T 14-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB TMO_2193 0cacc2013cee4bedd237de9516480750 90 PIRSF PIRSF017854 5 90 5.1E-37 T 14-10-2018 IPR016704 Conjugal transfer, TrbD TMO_2193 0cacc2013cee4bedd237de9516480750 90 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 15 87 5.0E-4 T 14-10-2018 TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 TIGRFAM TIGR01391 dnaG: DNA primase 5 413 8.0E-129 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 Gene3D G3DSA:3.90.580.10 1 99 1.3E-34 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 Gene3D G3DSA:3.90.980.10 111 236 9.5E-37 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 Pfam PF01807 CHC2 zinc finger 6 98 3.1E-34 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 SUPERFAMILY SSF56731 112 415 1.96E-100 T 14-10-2018 TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 SMART SM00400 34 88 4.1E-32 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 PIRSF PIRSF002811 1 613 2.1E-134 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 245 6.3E-36 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 Pfam PF13662 Toprim domain 256 329 3.8E-15 T 14-10-2018 IPR006171 TOPRIM domain TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 Gene3D G3DSA:3.40.1360.10 237 363 1.7E-38 T 14-10-2018 TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 SMART SM00493 255 326 1.7E-14 T 14-10-2018 IPR006171 TOPRIM domain TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 SUPERFAMILY SSF57783 2 100 5.61E-35 T 14-10-2018 TMO_c0107 f045cae5864ade8b47374cd5b58ddf39 631 Hamap MF_00974 DNA primase [dnaG]. 2 608 25.268 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 TMO_b0445 aa6d913c6ae09402e75e8998ee4ea338 315 Pfam PF00795 Carbon-nitrogen hydrolase 9 277 2.3E-52 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TMO_b0445 aa6d913c6ae09402e75e8998ee4ea338 315 SUPERFAMILY SSF56317 7 301 1.44E-68 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_b0445 aa6d913c6ae09402e75e8998ee4ea338 315 Gene3D G3DSA:3.60.110.10 3 286 3.6E-92 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_b0445 aa6d913c6ae09402e75e8998ee4ea338 315 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 39 54 - T 14-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 TMO_1108 6118e5438ca8d61f15201b3cff97d3eb 325 Pfam PF03602 Conserved hypothetical protein 95 140 221 5.8E-8 T 14-10-2018 TMO_1108 6118e5438ca8d61f15201b3cff97d3eb 325 Gene3D G3DSA:2.60.40.1180 26 92 1.6E-105 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta TMO_1108 6118e5438ca8d61f15201b3cff97d3eb 325 SUPERFAMILY SSF53335 15 285 3.13E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1108 6118e5438ca8d61f15201b3cff97d3eb 325 Gene3D G3DSA:3.40.50.150 93 309 1.6E-105 T 14-10-2018 TMO_2154 7be415a402f8756c245f4a653d981a26 506 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 39 151 1.8E-14 T 14-10-2018 IPR029095 NarX-like, N-terminal TMO_2154 7be415a402f8756c245f4a653d981a26 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 9.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2154 7be415a402f8756c245f4a653d981a26 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 9.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2154 7be415a402f8756c245f4a653d981a26 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 9.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2154 7be415a402f8756c245f4a653d981a26 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 442 9.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2154 7be415a402f8756c245f4a653d981a26 506 Gene3D G3DSA:1.10.287.130 226 325 6.8E-13 T 14-10-2018 TMO_2154 7be415a402f8756c245f4a653d981a26 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 488 4.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2154 7be415a402f8756c245f4a653d981a26 506 SUPERFAMILY SSF47384 247 327 3.14E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_2154 7be415a402f8756c245f4a653d981a26 506 SUPERFAMILY SSF55874 317 489 2.78E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2154 7be415a402f8756c245f4a653d981a26 506 SMART SM00387 374 489 1.0E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2154 7be415a402f8756c245f4a653d981a26 506 Gene3D G3DSA:3.30.565.10 326 491 4.3E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2154 7be415a402f8756c245f4a653d981a26 506 SMART SM00388 262 327 1.6E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1575 6e640f7825cf701851ef63552f91f8d7 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 478 507 1.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1575 6e640f7825cf701851ef63552f91f8d7 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 1.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1575 6e640f7825cf701851ef63552f91f8d7 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 1.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1575 6e640f7825cf701851ef63552f91f8d7 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 428 1.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1575 6e640f7825cf701851ef63552f91f8d7 568 SUPERFAMILY SSF58104 242 556 5.62E-61 T 14-10-2018 TMO_1575 6e640f7825cf701851ef63552f91f8d7 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 365 526 1.7E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_1575 6e640f7825cf701851ef63552f91f8d7 568 SMART SM00304 214 267 1.4E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_1575 6e640f7825cf701851ef63552f91f8d7 568 SMART SM00283 303 557 1.4E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_1575 6e640f7825cf701851ef63552f91f8d7 568 Pfam PF00672 HAMP domain 218 259 7.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_1575 6e640f7825cf701851ef63552f91f8d7 568 Gene3D G3DSA:1.10.287.950 261 558 4.6E-56 T 14-10-2018 TMO_1575 6e640f7825cf701851ef63552f91f8d7 568 Gene3D G3DSA:1.10.8.500 215 260 1.6E-14 T 14-10-2018 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 Gene3D G3DSA:3.30.930.10 226 535 2.9E-116 T 14-10-2018 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 SMART SM00863 173 222 3.0E-20 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 70 638 32.713 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 SUPERFAMILY SSF52954 534 635 2.42E-28 T 14-10-2018 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 SUPERFAMILY SSF55186 68 243 2.75E-61 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 533 1.0E-43 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 Gene3D G3DSA:3.40.50.800 536 638 8.6E-28 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily TMO_0528 4b372ca9022542b7b9911e210c01686d 662 Gene3D G3DSA:3.10.20.30 4 67 1.6E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_0528 4b372ca9022542b7b9911e210c01686d 662 Pfam PF02824 TGS domain 6 65 1.9E-10 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 175 222 2.1E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 SUPERFAMILY SSF55681 246 530 1.65E-91 T 14-10-2018 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 Gene3D G3DSA:3.30.980.10 73 225 5.6E-60 T 14-10-2018 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 76 630 3.7E-205 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 4.1E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 538 550 4.1E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 4.1E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 468 496 4.1E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 511 524 4.1E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 SUPERFAMILY SSF81271 6 65 4.36E-15 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 Gene3D G3DSA:3.30.54.20 134 190 5.6E-60 T 14-10-2018 TMO_0528 4b372ca9022542b7b9911e210c01686d 662 Pfam PF03129 Anticodon binding domain 545 634 1.6E-18 T 14-10-2018 IPR004154 Anticodon-binding TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 Pfam PF00106 short chain dehydrogenase 12 202 1.1E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 3.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 3.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 3.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 Gene3D G3DSA:3.40.50.720 9 246 1.6E-68 T 14-10-2018 TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 194 7.8E-4 T 14-10-2018 TMO_c0208 c2c624e49b00f0ff86955e3172ec1e2a 249 SUPERFAMILY SSF51735 8 233 7.58E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0103 cf2b5f16165faa43d1ccfdc7eecaae00 302 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 96 110 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TMO_c0103 cf2b5f16165faa43d1ccfdc7eecaae00 302 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 22 293 2.5E-132 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TMO_c0103 cf2b5f16165faa43d1ccfdc7eecaae00 302 SUPERFAMILY SSF53686 18 296 6.29E-107 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_c0103 cf2b5f16165faa43d1ccfdc7eecaae00 302 Gene3D G3DSA:3.40.50.1100 71 279 6.9E-126 T 14-10-2018 TMO_c0103 cf2b5f16165faa43d1ccfdc7eecaae00 302 Gene3D G3DSA:3.40.50.1100 31 221 6.9E-126 T 14-10-2018 TMO_c0103 cf2b5f16165faa43d1ccfdc7eecaae00 302 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 69 291 8.3E-37 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_2314 5ace57075806c4bb6569bee3aaa92b57 484 Pfam PF10983 Protein of unknown function (DUF2793) 24 109 6.6E-31 T 14-10-2018 IPR021251 Protein of unknown function DUF2793 TMO_1884 38ab511f632f1f934b05f53669197404 519 Gene3D G3DSA:3.40.50.300 2 161 2.4E-42 T 14-10-2018 TMO_1884 38ab511f632f1f934b05f53669197404 519 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 505 5.9E-162 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TMO_1884 38ab511f632f1f934b05f53669197404 519 Hamap MF_00195 GTPase Der [der]. 1 509 36.841 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TMO_1884 38ab511f632f1f934b05f53669197404 519 Pfam PF01926 50S ribosome-binding GTPase 250 368 1.2E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_1884 38ab511f632f1f934b05f53669197404 519 Pfam PF01926 50S ribosome-binding GTPase 4 120 4.3E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_1884 38ab511f632f1f934b05f53669197404 519 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 251 271 1.1E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_1884 38ab511f632f1f934b05f53669197404 519 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 321 339 1.1E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_1884 38ab511f632f1f934b05f53669197404 519 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 248 415 9.3E-28 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_1884 38ab511f632f1f934b05f53669197404 519 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 124 4.2E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_1884 38ab511f632f1f934b05f53669197404 519 SUPERFAMILY SSF52540 138 513 1.01E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1884 38ab511f632f1f934b05f53669197404 519 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 426 506 5.2E-30 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like TMO_1884 38ab511f632f1f934b05f53669197404 519 SUPERFAMILY SSF52540 2 161 3.87E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1884 38ab511f632f1f934b05f53669197404 519 Gene3D G3DSA:3.30.300.20 426 508 7.9E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_1884 38ab511f632f1f934b05f53669197404 519 Gene3D G3DSA:3.40.50.300 244 421 1.4E-47 T 14-10-2018 TMO_1884 38ab511f632f1f934b05f53669197404 519 PIRSF PIRSF006485 1 514 1.6E-158 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TMO_b0019 e4675c2188160e9cd1d91a75c690f561 450 TIGRFAM TIGR00836 amt: ammonium transporter 45 448 2.0E-132 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 TMO_b0019 e4675c2188160e9cd1d91a75c690f561 450 ProSitePatterns PS01219 Ammonium transporters signature. 204 229 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 TMO_b0019 e4675c2188160e9cd1d91a75c690f561 450 Pfam PF00909 Ammonium Transporter Family 47 448 6.8E-118 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 TMO_b0019 e4675c2188160e9cd1d91a75c690f561 450 SUPERFAMILY SSF111352 41 429 8.89E-130 T 14-10-2018 TMO_b0019 e4675c2188160e9cd1d91a75c690f561 450 Gene3D G3DSA:1.10.3430.10 22 450 7.4E-140 T 14-10-2018 IPR029020 Ammonium/urea transporter TMO_c0458 ccc7050ca83f3e5bb0c2cb079d5f794f 97 SUPERFAMILY SSF47598 4 47 2.89E-7 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_c0458 ccc7050ca83f3e5bb0c2cb079d5f794f 97 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 7 70 2.1E-5 T 14-10-2018 IPR022789 Antitoxin ParD TMO_c0458 ccc7050ca83f3e5bb0c2cb079d5f794f 97 Gene3D G3DSA:1.10.8.1250 13 89 3.3E-11 T 14-10-2018 IPR038296 Antitoxin ParD superfamily TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 158 282 7.33E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Gene3D G3DSA:2.150.10.10 425 509 9.2E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Gene3D G3DSA:2.150.10.10 373 421 5.7E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 604 683 2.3E-4 T 14-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 69 158 6.67E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Gene3D G3DSA:2.150.10.10 75 168 5.8E-21 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 491 509 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 570 588 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 402 420 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 411 429 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 10 84 7.85E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 335 462 7.19E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 147 165 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Gene3D G3DSA:2.150.10.10 284 370 2.1E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Gene3D G3DSA:2.150.10.10 193 283 4.8E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 203 219 2.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 150 166 0.017 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 62 78 0.09 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 397 413 5.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 26 42 35.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 309 324 0.091 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 133 149 0.0024 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 221 237 0.53 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 45 61 0.078 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 574 590 0.017 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 326 342 0.011 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 239 254 0.16 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 485 502 0.033 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 468 483 0.98 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 556 572 0.082 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 415 430 3.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 379 395 0.78 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 247 345 3.53E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 50 68 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Gene3D G3DSA:2.150.10.10 510 689 1.6E-41 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 Gene3D G3DSA:2.150.10.10 2 74 1.1E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 PRINTS PR00313 NodO calcium binding signature 327 335 1.1E-10 T 14-10-2018 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 PRINTS PR00313 NodO calcium binding signature 309 317 1.1E-10 T 14-10-2018 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 PRINTS PR00313 NodO calcium binding signature 336 345 1.1E-10 T 14-10-2018 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 PRINTS PR00313 NodO calcium binding signature 130 141 1.1E-10 T 14-10-2018 TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 472 643 6.02E-30 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 138 156 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0626 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 59 77 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_0822 0ae75ddc1aa11c5acdee58755adde34e 230 Gene3D G3DSA:1.10.10.640 80 218 1.7E-30 T 14-10-2018 TMO_0822 0ae75ddc1aa11c5acdee58755adde34e 230 Gene3D G3DSA:3.10.450.50 63 193 1.7E-30 T 14-10-2018 TMO_0822 0ae75ddc1aa11c5acdee58755adde34e 230 Pfam PF05494 MlaC protein 48 219 3.3E-50 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC TMO_1905 0c480b2fc51e88e34f1f895671f41bc0 113 Pfam PF13487 HD domain 5 42 2.0E-10 T 14-10-2018 TMO_1905 0c480b2fc51e88e34f1f895671f41bc0 113 SUPERFAMILY SSF109604 13 91 6.6E-13 T 14-10-2018 TMO_1905 0c480b2fc51e88e34f1f895671f41bc0 113 Gene3D G3DSA:1.10.3210.10 1 93 1.4E-25 T 14-10-2018 TMO_3476 46147fffb7c7e85fb6b559b048154468 251 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 9 249 30.666 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_3476 46147fffb7c7e85fb6b559b048154468 251 SUPERFAMILY SSF55347 111 220 2.83E-35 T 14-10-2018 TMO_3476 46147fffb7c7e85fb6b559b048154468 251 SUPERFAMILY SSF51735 3 250 6.02E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3476 46147fffb7c7e85fb6b559b048154468 251 Gene3D G3DSA:3.30.360.10 111 218 1.3E-90 T 14-10-2018 TMO_3476 46147fffb7c7e85fb6b559b048154468 251 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 134 151 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_3476 46147fffb7c7e85fb6b559b048154468 251 Gene3D G3DSA:3.40.50.720 2 248 1.3E-90 T 14-10-2018 TMO_3476 46147fffb7c7e85fb6b559b048154468 251 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 112 248 1.9E-42 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_3476 46147fffb7c7e85fb6b559b048154468 251 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 248 1.2E-78 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_3476 46147fffb7c7e85fb6b559b048154468 251 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 109 8.7E-27 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_3476 46147fffb7c7e85fb6b559b048154468 251 PIRSF PIRSF000161 1 251 2.1E-76 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_a0261 abb39de106c58c58e6e47ba17b0be974 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 6.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0261 abb39de106c58c58e6e47ba17b0be974 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 58 69 6.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0261 abb39de106c58c58e6e47ba17b0be974 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 58 6.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0261 abb39de106c58c58e6e47ba17b0be974 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 81 4.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0261 abb39de106c58c58e6e47ba17b0be974 318 Gene3D G3DSA:3.40.190.10 110 309 1.1E-57 T 14-10-2018 TMO_a0261 abb39de106c58c58e6e47ba17b0be974 318 SUPERFAMILY SSF46785 19 129 3.88E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0261 abb39de106c58c58e6e47ba17b0be974 318 Pfam PF03466 LysR substrate binding domain 107 312 7.8E-45 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_a0261 abb39de106c58c58e6e47ba17b0be974 318 SUPERFAMILY SSF53850 108 314 1.03E-45 T 14-10-2018 TMO_a0261 abb39de106c58c58e6e47ba17b0be974 318 Gene3D G3DSA:1.10.10.10 20 103 3.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0261 abb39de106c58c58e6e47ba17b0be974 318 Gene3D G3DSA:3.40.190.10 182 283 1.1E-57 T 14-10-2018 TMO_1739 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 SUPERFAMILY SSF51735 150 238 2.86E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1739 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 Pfam PF13727 CoA-binding domain 74 246 8.1E-25 T 14-10-2018 TMO_1739 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 Pfam PF02397 Bacterial sugar transferase 285 469 1.5E-63 T 14-10-2018 IPR003362 Bacterial sugar transferase TMO_1739 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 Gene3D G3DSA:3.40.50.720 148 257 6.5E-16 T 14-10-2018 TMO_1739 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 26 474 9.9E-122 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase TMO_1739 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 26 476 9.4E-128 T 14-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 TMO_3069 e9230ee8c7002e029e7ccb7b8ca23dae 247 Gene3D G3DSA:3.50.30.100 4 212 9.5E-52 T 14-10-2018 TMO_3069 e9230ee8c7002e029e7ccb7b8ca23dae 247 Pfam PF03737 Aldolase/RraA 25 190 1.5E-30 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein TMO_3069 e9230ee8c7002e029e7ccb7b8ca23dae 247 SUPERFAMILY SSF89562 22 200 4.58E-41 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily TMO_3345 56f022ae6b24f434d578fb8a616a1878 336 SUPERFAMILY SSF46689 287 335 6.27E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_3345 56f022ae6b24f434d578fb8a616a1878 336 SMART SM00342 252 334 1.6E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_3345 56f022ae6b24f434d578fb8a616a1878 336 Pfam PF12833 Helix-turn-helix domain 258 335 2.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_3345 56f022ae6b24f434d578fb8a616a1878 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 318 334 5.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_3345 56f022ae6b24f434d578fb8a616a1878 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 318 5.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_3345 56f022ae6b24f434d578fb8a616a1878 336 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 288 330 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_3345 56f022ae6b24f434d578fb8a616a1878 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 26 205 1.0E-35 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal TMO_3345 56f022ae6b24f434d578fb8a616a1878 336 Gene3D G3DSA:1.10.10.60 232 336 1.1E-24 T 14-10-2018 TMO_1571 fb60c92f9958a4b3b993a130e026ad0f 179 Gene3D G3DSA:3.40.50.620 7 175 1.2E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_1571 fb60c92f9958a4b3b993a130e026ad0f 179 Pfam PF01467 Cytidylyltransferase-like 11 142 1.3E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_1571 fb60c92f9958a4b3b993a130e026ad0f 179 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 10 165 2.2E-56 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TMO_1571 fb60c92f9958a4b3b993a130e026ad0f 179 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 10 65 3.9E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_1571 fb60c92f9958a4b3b993a130e026ad0f 179 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 8 169 33.116 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TMO_1571 fb60c92f9958a4b3b993a130e026ad0f 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 123 145 2.1E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TMO_1571 fb60c92f9958a4b3b993a130e026ad0f 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 96 112 2.1E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TMO_1571 fb60c92f9958a4b3b993a130e026ad0f 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 26 47 2.1E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TMO_1571 fb60c92f9958a4b3b993a130e026ad0f 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 8 26 2.1E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TMO_1571 fb60c92f9958a4b3b993a130e026ad0f 179 SUPERFAMILY SSF52374 10 164 1.69E-37 T 14-10-2018 TMO_2261 9d1f1562eaf9f5218b93ea1c5bdc11a4 129 SUPERFAMILY SSF56042 2 125 2.39E-28 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TMO_2261 9d1f1562eaf9f5218b93ea1c5bdc11a4 129 Pfam PF02769 AIR synthase related protein, C-terminal domain 4 98 6.9E-18 T 14-10-2018 IPR010918 PurM-like, C-terminal domain TMO_2261 9d1f1562eaf9f5218b93ea1c5bdc11a4 129 Gene3D G3DSA:3.90.650.10 1 126 1.8E-28 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TMO_c0258 240a64c9fe8a3e4048f3881bf4e93851 436 PIRSF PIRSF006066 5 433 6.4E-89 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_c0258 240a64c9fe8a3e4048f3881bf4e93851 436 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 423 3.9E-83 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_c0258 240a64c9fe8a3e4048f3881bf4e93851 436 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 428 1.0E-113 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 177 8.0E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 4.4E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 Gene3D G3DSA:3.40.50.300 3 188 1.7E-70 T 14-10-2018 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 Gene3D G3DSA:3.30.70.3380 371 481 2.2E-40 T 14-10-2018 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 Pfam PF00679 Elongation factor G C-terminus 402 487 3.1E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like TMO_0201 b145b27e6d445c109e35c63b45915b74 599 SUPERFAMILY SSF54980 296 373 6.12E-19 T 14-10-2018 IPR035647 EF-G domain III/V-like TMO_0201 b145b27e6d445c109e35c63b45915b74 599 Gene3D G3DSA:3.30.70.2570 482 556 9.5E-34 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily TMO_0201 b145b27e6d445c109e35c63b45915b74 599 SUPERFAMILY SSF54980 402 496 3.02E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like TMO_0201 b145b27e6d445c109e35c63b45915b74 599 Gene3D G3DSA:2.40.30.10 189 288 1.2E-33 T 14-10-2018 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 PRINTS PR00315 GTP-binding elongation factor signature 77 87 2.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 PRINTS PR00315 GTP-binding elongation factor signature 52 60 2.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 PRINTS PR00315 GTP-binding elongation factor signature 129 138 2.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 PRINTS PR00315 GTP-binding elongation factor signature 93 104 2.3E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 Gene3D G3DSA:3.30.70.870 289 370 4.5E-35 T 14-10-2018 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 1.6E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal TMO_0201 b145b27e6d445c109e35c63b45915b74 599 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 5.3E-295 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 303.677 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site TMO_0201 b145b27e6d445c109e35c63b45915b74 599 Pfam PF03144 Elongation factor Tu domain 2 208 278 3.5E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TMO_0201 b145b27e6d445c109e35c63b45915b74 599 SMART SM00838 401 488 6.4E-4 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like TMO_0201 b145b27e6d445c109e35c63b45915b74 599 SUPERFAMILY SSF52540 1 227 1.47E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1467 1482ad066af06c99d535210b3e17d181 434 Pfam PF00999 Sodium/hydrogen exchanger family 11 410 4.5E-54 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TMO_b0257 e6db5fe85574732ced46c5b71d0df811 567 Gene3D G3DSA:1.10.287.950 275 561 4.8E-48 T 14-10-2018 TMO_b0257 e6db5fe85574732ced46c5b71d0df811 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 432 9.6E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_b0257 e6db5fe85574732ced46c5b71d0df811 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 9.6E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_b0257 e6db5fe85574732ced46c5b71d0df811 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 357 9.6E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_b0257 e6db5fe85574732ced46c5b71d0df811 567 SMART SM00283 314 561 1.8E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_b0257 e6db5fe85574732ced46c5b71d0df811 567 SUPERFAMILY SSF58104 246 560 9.42E-53 T 14-10-2018 TMO_b0257 e6db5fe85574732ced46c5b71d0df811 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 368 525 2.8E-26 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_b0257 e6db5fe85574732ced46c5b71d0df811 567 SMART SM00304 218 271 3.4E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_b0257 e6db5fe85574732ced46c5b71d0df811 567 Gene3D G3DSA:1.10.8.500 218 269 5.4E-11 T 14-10-2018 TMO_b0257 e6db5fe85574732ced46c5b71d0df811 567 Pfam PF00672 HAMP domain 219 267 1.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_3063 783b743788dbb75dc9f722be98f0243c 643 Gene3D G3DSA:3.40.50.12780 2 309 9.4E-38 T 14-10-2018 TMO_3063 783b743788dbb75dc9f722be98f0243c 643 Pfam PF00501 AMP-binding enzyme 20 470 2.2E-79 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_3063 783b743788dbb75dc9f722be98f0243c 643 SUPERFAMILY SSF56801 11 603 1.16E-100 T 14-10-2018 TMO_3063 783b743788dbb75dc9f722be98f0243c 643 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_3063 783b743788dbb75dc9f722be98f0243c 643 Gene3D G3DSA:3.40.50.12780 310 469 6.6E-36 T 14-10-2018 TMO_b0358 c2e67a3d632cee75c54436d0977362e4 178 Gene3D G3DSA:1.10.1740.10 5 88 3.7E-7 T 14-10-2018 TMO_b0358 c2e67a3d632cee75c54436d0977362e4 178 SUPERFAMILY SSF88659 103 174 1.51E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_b0358 c2e67a3d632cee75c54436d0977362e4 178 Gene3D G3DSA:1.10.10.10 99 176 2.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0358 c2e67a3d632cee75c54436d0977362e4 178 Pfam PF04542 Sigma-70 region 2 16 83 1.1E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_b0358 c2e67a3d632cee75c54436d0977362e4 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 173 1.3E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_b0358 c2e67a3d632cee75c54436d0977362e4 178 Pfam PF08281 Sigma-70, region 4 120 170 2.3E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_b0358 c2e67a3d632cee75c54436d0977362e4 178 SUPERFAMILY SSF88946 14 101 2.9E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_3425 5066a1aa7ea4b4c0156b2790d5547f65 364 Pfam PF13609 Gram-negative porin 12 344 7.8E-47 T 14-10-2018 TMO_3425 5066a1aa7ea4b4c0156b2790d5547f65 364 Gene3D G3DSA:2.40.160.10 29 364 4.8E-47 T 14-10-2018 IPR023614 Porin domain superfamily TMO_3425 5066a1aa7ea4b4c0156b2790d5547f65 364 SUPERFAMILY SSF56935 20 364 3.89E-29 T 14-10-2018 TMO_a0278 63a3a8d19e532d782598273745920789 208 Pfam PF01227 GTP cyclohydrolase I 19 195 2.8E-71 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TMO_a0278 63a3a8d19e532d782598273745920789 208 SUPERFAMILY SSF55620 9 197 4.15E-73 T 14-10-2018 TMO_a0278 63a3a8d19e532d782598273745920789 208 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 19 196 6.2E-62 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TMO_a0278 63a3a8d19e532d782598273745920789 208 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 76 92 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TMO_a0278 63a3a8d19e532d782598273745920789 208 Gene3D G3DSA:3.30.1130.10 66 198 9.0E-51 T 14-10-2018 TMO_a0278 63a3a8d19e532d782598273745920789 208 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 14 197 38.14 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TMO_a0278 63a3a8d19e532d782598273745920789 208 Gene3D G3DSA:1.10.286.10 8 62 5.2E-18 T 14-10-2018 TMO_1224 119f26be5bd85cafdb0f0e5cd0906182 165 Gene3D G3DSA:2.40.50.180 48 157 6.2E-31 T 14-10-2018 TMO_1224 119f26be5bd85cafdb0f0e5cd0906182 165 Gene3D G3DSA:2.30.30.40 31 156 6.2E-31 T 14-10-2018 TMO_1224 119f26be5bd85cafdb0f0e5cd0906182 165 SUPERFAMILY SSF50341 26 163 9.68E-31 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TMO_1224 119f26be5bd85cafdb0f0e5cd0906182 165 Pfam PF01584 CheW-like domain 29 163 9.8E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TMO_1224 119f26be5bd85cafdb0f0e5cd0906182 165 SMART SM00260 25 162 2.1E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TMO_2842 3fa605cd91946453299bda50b1cba497 261 SUPERFAMILY SSF161098 8 254 9.35E-56 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2842 3fa605cd91946453299bda50b1cba497 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 250 5.9E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2842 3fa605cd91946453299bda50b1cba497 261 Gene3D G3DSA:1.10.3720.10 6 258 1.9E-54 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2190 4d5e4ef1477e3668a63da16901558d9e 432 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 254 4.2E-56 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 TMO_2190 4d5e4ef1477e3668a63da16901558d9e 432 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 3 302 5.3E-70 T 14-10-2018 IPR014150 Conjugal transfer, TrbL TMO_a0582 53ee81b61155dcb41c567fc8eacfb884 793 Pfam PF01804 Penicillin amidase 18 778 6.7E-187 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 TMO_a0582 53ee81b61155dcb41c567fc8eacfb884 793 Gene3D G3DSA:2.30.120.10 337 405 1.2E-145 T 14-10-2018 TMO_a0582 53ee81b61155dcb41c567fc8eacfb884 793 Gene3D G3DSA:1.10.439.10 2 155 1.1E-35 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 TMO_a0582 53ee81b61155dcb41c567fc8eacfb884 793 Gene3D G3DSA:1.10.1400.10 556 677 1.2E-145 T 14-10-2018 TMO_a0582 53ee81b61155dcb41c567fc8eacfb884 793 SUPERFAMILY SSF56235 14 790 1.41E-181 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_a0582 53ee81b61155dcb41c567fc8eacfb884 793 PIRSF PIRSF001227 3 790 5.1E-186 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 TMO_a0582 53ee81b61155dcb41c567fc8eacfb884 793 Gene3D G3DSA:3.60.20.10 265 765 1.2E-145 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_d0019 883d78199a3264ee92215a72a2737047 247 Gene3D G3DSA:3.20.20.70 39 247 3.3E-67 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_d0019 883d78199a3264ee92215a72a2737047 247 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 40 247 32.011 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 TMO_d0019 883d78199a3264ee92215a72a2737047 247 Pfam PF13394 4Fe-4S single cluster domain 62 159 1.0E-4 T 14-10-2018 TMO_d0019 883d78199a3264ee92215a72a2737047 247 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 40 247 4.4E-109 T 14-10-2018 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 TMO_d0019 883d78199a3264ee92215a72a2737047 247 Pfam PF04055 Radical SAM superfamily 83 178 1.9E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_d0019 883d78199a3264ee92215a72a2737047 247 SUPERFAMILY SSF102114 83 176 3.14E-8 T 14-10-2018 TMO_d0019 883d78199a3264ee92215a72a2737047 247 PIRSF PIRSF000370 38 247 4.2E-33 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 TMO_1077 2e54940c133404a21570e2b23300c23a 387 Gene3D G3DSA:1.10.8.410 337 387 9.2E-21 T 14-10-2018 TMO_1077 2e54940c133404a21570e2b23300c23a 387 PRINTS PR00207 Flagellin signature 37 54 1.8E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_1077 2e54940c133404a21570e2b23300c23a 387 PRINTS PR00207 Flagellin signature 111 134 1.8E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_1077 2e54940c133404a21570e2b23300c23a 387 PRINTS PR00207 Flagellin signature 76 95 1.8E-16 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_1077 2e54940c133404a21570e2b23300c23a 387 Gene3D G3DSA:1.20.1330.10 44 336 1.6E-55 T 14-10-2018 TMO_1077 2e54940c133404a21570e2b23300c23a 387 Pfam PF00700 Bacterial flagellin C-terminal helical region 301 386 1.7E-22 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_1077 2e54940c133404a21570e2b23300c23a 387 SUPERFAMILY SSF64518 1 386 3.27E-73 T 14-10-2018 TMO_1077 2e54940c133404a21570e2b23300c23a 387 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 9.0E-33 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_1077 2e54940c133404a21570e2b23300c23a 387 Gene3D G3DSA:3.30.70.2120 174 285 1.6E-55 T 14-10-2018 TMO_1991 74a6c67f4a8d777f571ed9e0de97ac31 395 Gene3D G3DSA:3.40.640.10 42 279 2.2E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_1991 74a6c67f4a8d777f571ed9e0de97ac31 395 Gene3D G3DSA:3.90.1150.10 14 376 2.2E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_1991 74a6c67f4a8d777f571ed9e0de97ac31 395 Pfam PF00155 Aminotransferase class I and II 29 380 2.5E-60 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_1991 74a6c67f4a8d777f571ed9e0de97ac31 395 SUPERFAMILY SSF53383 4 384 2.37E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_0248 6152eb34b85c57e144334daae5c8f289 371 Gene3D G3DSA:2.40.50.140 287 348 1.9E-7 T 14-10-2018 TMO_0248 6152eb34b85c57e144334daae5c8f289 371 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 2 242 2.2E-116 T 14-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 TMO_0248 6152eb34b85c57e144334daae5c8f289 371 SUPERFAMILY SSF52540 1 244 3.25E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0248 6152eb34b85c57e144334daae5c8f289 371 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0248 6152eb34b85c57e144334daae5c8f289 371 SUPERFAMILY SSF50331 239 352 6.8E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_0248 6152eb34b85c57e144334daae5c8f289 371 Gene3D G3DSA:2.40.50.940 224 353 1.9E-7 T 14-10-2018 TMO_0248 6152eb34b85c57e144334daae5c8f289 371 Pfam PF12857 TOBE-like domain 293 348 3.1E-11 T 14-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 TMO_0248 6152eb34b85c57e144334daae5c8f289 371 Gene3D G3DSA:3.40.50.300 1 223 1.0E-69 T 14-10-2018 TMO_0248 6152eb34b85c57e144334daae5c8f289 371 Pfam PF00005 ABC transporter 19 163 2.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0248 6152eb34b85c57e144334daae5c8f289 371 SMART SM00382 26 213 8.9E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0161 d4ca1f61f294d346f1bebc7ba73ec02d 301 Gene3D G3DSA:1.10.10.10 5 89 1.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0161 d4ca1f61f294d346f1bebc7ba73ec02d 301 SUPERFAMILY SSF46785 4 84 1.44E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0161 d4ca1f61f294d346f1bebc7ba73ec02d 301 Gene3D G3DSA:3.40.190.10 94 293 1.1E-54 T 14-10-2018 TMO_b0161 d4ca1f61f294d346f1bebc7ba73ec02d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.2E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0161 d4ca1f61f294d346f1bebc7ba73ec02d 301 Pfam PF03466 LysR substrate binding domain 90 297 6.7E-40 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0161 d4ca1f61f294d346f1bebc7ba73ec02d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0161 d4ca1f61f294d346f1bebc7ba73ec02d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0161 d4ca1f61f294d346f1bebc7ba73ec02d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0161 d4ca1f61f294d346f1bebc7ba73ec02d 301 SUPERFAMILY SSF53850 92 299 3.8E-43 T 14-10-2018 TMO_b0161 d4ca1f61f294d346f1bebc7ba73ec02d 301 Gene3D G3DSA:3.40.190.10 166 269 1.1E-54 T 14-10-2018 TMO_c0884 f3ff728e73a4b5d78b47df7d6f58edae 528 Pfam PF00563 EAL domain 280 489 2.0E-50 T 14-10-2018 IPR001633 EAL domain TMO_c0884 f3ff728e73a4b5d78b47df7d6f58edae 528 SMART SM00052 273 508 1.3E-58 T 14-10-2018 IPR001633 EAL domain TMO_c0884 f3ff728e73a4b5d78b47df7d6f58edae 528 Pfam PF00990 Diguanylate cyclase, GGDEF domain 102 257 5.4E-41 T 14-10-2018 IPR000160 GGDEF domain TMO_c0884 f3ff728e73a4b5d78b47df7d6f58edae 528 Gene3D G3DSA:3.20.20.450 274 509 1.2E-64 T 14-10-2018 IPR035919 EAL domain superfamily TMO_c0884 f3ff728e73a4b5d78b47df7d6f58edae 528 SUPERFAMILY SSF55073 107 265 1.88E-44 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_c0884 f3ff728e73a4b5d78b47df7d6f58edae 528 SUPERFAMILY SSF141868 280 487 8.5E-57 T 14-10-2018 IPR035919 EAL domain superfamily TMO_c0884 f3ff728e73a4b5d78b47df7d6f58edae 528 Gene3D G3DSA:3.30.70.270 96 269 8.6E-51 T 14-10-2018 TMO_c0884 f3ff728e73a4b5d78b47df7d6f58edae 528 SMART SM00267 91 263 2.0E-53 T 14-10-2018 IPR000160 GGDEF domain TMO_c0884 f3ff728e73a4b5d78b47df7d6f58edae 528 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 100 260 2.4E-34 T 14-10-2018 IPR000160 GGDEF domain TMO_2383 e7da9651ef5eeeb6402c12cf96f60467 519 Gene3D G3DSA:3.40.50.300 3 191 1.1E-27 T 14-10-2018 TMO_2383 e7da9651ef5eeeb6402c12cf96f60467 519 Gene3D G3DSA:3.30.420.240 303 473 1.1E-8 T 14-10-2018 TMO_b0137 4205d3124e0084b78e76edda03c8e630 438 Gene3D G3DSA:3.60.20.10 1 117 1.9E-38 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_b0137 4205d3124e0084b78e76edda03c8e630 438 Gene3D G3DSA:3.40.50.620 130 381 6.1E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_b0137 4205d3124e0084b78e76edda03c8e630 438 SUPERFAMILY SSF52402 133 374 2.87E-59 T 14-10-2018 TMO_b0137 4205d3124e0084b78e76edda03c8e630 438 Pfam PF13537 Glutamine amidotransferase domain 1 92 6.8E-34 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TMO_b0137 4205d3124e0084b78e76edda03c8e630 438 SUPERFAMILY SSF56235 1 108 1.46E-33 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_b0137 4205d3124e0084b78e76edda03c8e630 438 Pfam PF00733 Asparagine synthase 284 364 3.4E-24 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_b0137 4205d3124e0084b78e76edda03c8e630 438 Pfam PF00733 Asparagine synthase 137 275 3.1E-32 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_b0137 4205d3124e0084b78e76edda03c8e630 438 PIRSF PIRSF001589 1 292 5.0E-65 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_b0137 4205d3124e0084b78e76edda03c8e630 438 PIRSF PIRSF001589 279 374 1.0E-20 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_1358 b6c3873b4065ec41062edbf38d661f7c 631 SUPERFAMILY SSF56935 38 631 6.72E-111 T 14-10-2018 TMO_1358 b6c3873b4065ec41062edbf38d661f7c 631 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 156 1.2E-26 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_1358 b6c3873b4065ec41062edbf38d661f7c 631 Gene3D G3DSA:2.170.130.10 30 161 6.4E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_1358 b6c3873b4065ec41062edbf38d661f7c 631 Gene3D G3DSA:2.40.170.20 171 631 1.1E-101 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_1358 b6c3873b4065ec41062edbf38d661f7c 631 Pfam PF00593 TonB dependent receptor 269 629 1.8E-43 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_c0026 e1be52ed3b4afe1e91f2ea3c3181df5d 640 Pfam PF07514 Putative helicase 51 364 8.4E-128 T 14-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative TMO_c0026 e1be52ed3b4afe1e91f2ea3c3181df5d 640 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 515 638 5.0E-48 T 14-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal TMO_c0026 e1be52ed3b4afe1e91f2ea3c3181df5d 640 SUPERFAMILY SSF109604 92 190 5.42E-5 T 14-10-2018 TMO_c0026 e1be52ed3b4afe1e91f2ea3c3181df5d 640 Gene3D G3DSA:1.10.3210.40 53 275 3.2E-40 T 14-10-2018 TMO_c0026 e1be52ed3b4afe1e91f2ea3c3181df5d 640 Gene3D G3DSA:1.10.10.10 516 586 1.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0026 e1be52ed3b4afe1e91f2ea3c3181df5d 640 SUPERFAMILY SSF46785 512 638 2.31E-43 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0026 e1be52ed3b4afe1e91f2ea3c3181df5d 640 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 50 267 3.1E-91 T 14-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class TMO_c0026 e1be52ed3b4afe1e91f2ea3c3181df5d 640 Gene3D G3DSA:2.40.10.200 532 632 1.6E-24 T 14-10-2018 TMO_0988 130626fdb2d764ce968abeafb12b1c38 197 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 5 197 37.367 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_0988 130626fdb2d764ce968abeafb12b1c38 197 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 25 104 1.9E-26 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_0988 130626fdb2d764ce968abeafb12b1c38 197 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 7 197 1.5E-71 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_0988 130626fdb2d764ce968abeafb12b1c38 197 Gene3D G3DSA:2.30.110.10 3 197 3.2E-76 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_0988 130626fdb2d764ce968abeafb12b1c38 197 PIRSF PIRSF000190 4 197 5.1E-74 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_0988 130626fdb2d764ce968abeafb12b1c38 197 SUPERFAMILY SSF50475 7 197 8.23E-63 T 14-10-2018 TMO_0988 130626fdb2d764ce968abeafb12b1c38 197 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 157 197 1.2E-13 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 515 539 0.3 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 272 0.0019 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 SMART SM00382 40 244 5.7E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 SMART SM00382 321 513 2.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 Gene3D G3DSA:3.40.50.300 283 542 4.0E-80 T 14-10-2018 TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 Gene3D G3DSA:3.40.50.300 9 279 3.2E-80 T 14-10-2018 TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 Pfam PF00005 ABC transporter 315 464 4.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 Pfam PF00005 ABC transporter 33 194 9.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 SUPERFAMILY SSF52540 11 265 3.69E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3185 783aaeb52d62c4c51ecee77e191f60e5 545 SUPERFAMILY SSF52540 285 535 1.07E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0217 b2554148001659f0c106a3e32c160ace 316 SUPERFAMILY SSF56634 34 311 8.11E-33 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_b0217 b2554148001659f0c106a3e32c160ace 316 Gene3D G3DSA:1.20.1280.120 124 308 4.8E-14 T 14-10-2018 TMO_b0217 b2554148001659f0c106a3e32c160ace 316 Gene3D G3DSA:2.40.180.20 44 294 4.8E-14 T 14-10-2018 TMO_1214 fbc6b82d1c05adfc60ea98cc40deb649 449 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 249 408 1.4E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_1214 fbc6b82d1c05adfc60ea98cc40deb649 449 Gene3D G3DSA:1.10.287.950 154 442 5.4E-54 T 14-10-2018 TMO_1214 fbc6b82d1c05adfc60ea98cc40deb649 449 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 285 312 8.0E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1214 fbc6b82d1c05adfc60ea98cc40deb649 449 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 362 391 8.0E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1214 fbc6b82d1c05adfc60ea98cc40deb649 449 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 208 237 8.0E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1214 fbc6b82d1c05adfc60ea98cc40deb649 449 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 343 8.0E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1214 fbc6b82d1c05adfc60ea98cc40deb649 449 Gene3D G3DSA:1.10.490.10 9 153 1.3E-45 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_1214 fbc6b82d1c05adfc60ea98cc40deb649 449 SMART SM00283 187 441 3.3E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_1214 fbc6b82d1c05adfc60ea98cc40deb649 449 SUPERFAMILY SSF46458 12 155 6.47E-37 T 14-10-2018 IPR009050 Globin-like superfamily TMO_1214 fbc6b82d1c05adfc60ea98cc40deb649 449 SUPERFAMILY SSF58104 193 440 2.09E-56 T 14-10-2018 TMO_1214 fbc6b82d1c05adfc60ea98cc40deb649 449 Pfam PF11563 Protoglobin 12 159 6.4E-41 T 14-10-2018 TMO_0722 ca18663a2038c883c51e0f58db4465fa 362 SUPERFAMILY SSF53756 77 359 1.19E-15 T 14-10-2018 TMO_0722 ca18663a2038c883c51e0f58db4465fa 362 Gene3D G3DSA:3.40.50.2000 213 361 4.0E-16 T 14-10-2018 TMO_0722 ca18663a2038c883c51e0f58db4465fa 362 Pfam PF13692 Glycosyl transferases group 1 221 353 5.3E-22 T 14-10-2018 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Pfam PF01043 SecA preprotein cross-linking domain 232 344 3.7E-38 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Pfam PF07517 SecA DEAD-like domain 7 387 3.2E-132 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Pfam PF02810 SEC-C motif 872 890 6.4E-8 T 14-10-2018 IPR004027 SEC-C motif TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Gene3D G3DSA:3.40.50.300 22 401 6.7E-178 T 14-10-2018 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Gene3D G3DSA:1.10.3060.10 613 824 4.4E-71 T 14-10-2018 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SUPERFAMILY SSF52540 402 610 3.82E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Gene3D G3DSA:3.90.1440.10 229 354 6.7E-178 T 14-10-2018 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Pfam PF07516 SecA Wing and Scaffold domain 609 819 2.0E-64 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 325 347 2.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 117 127 2.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 399 412 2.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 63 87 2.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 101 115 2.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 170 190 2.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 362 379 2.4E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SMART SM00958 228 344 3.7E-72 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SMART SM00957 6 388 5.3E-295 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Gene3D G3DSA:3.40.50.300 403 611 1.1E-88 T 14-10-2018 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 ProSitePatterns PS01312 SecA family signature. 486 501 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SUPERFAMILY SSF81767 227 354 4.45E-43 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 823 20.356 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Gene3D G3DSA:3.10.450.50 860 892 5.6E-6 T 14-10-2018 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 808 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SUPERFAMILY SSF81886 612 880 5.75E-78 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily TMO_0353 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SUPERFAMILY SSF52540 7 401 5.52E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 SUPERFAMILY SSF53901 17 442 2.31E-58 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 180 196 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 Pfam PF08242 Methyltransferase domain 1018 1120 1.8E-15 T 14-10-2018 IPR013217 Methyltransferase type 12 TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 Gene3D G3DSA:3.30.70.3050 492 614 5.0E-155 T 14-10-2018 TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 SMART SM00823 Phosphopantetheine attachment site 1295 1364 1.1E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 SUPERFAMILY SSF47336 1293 1360 7.07E-12 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 275 394 3.6E-31 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 Gene3D G3DSA:3.40.50.150 983 1190 5.7E-45 T 14-10-2018 TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1319 1334 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 SUPERFAMILY SSF53335 987 1176 1.39E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 Gene3D G3DSA:3.40.47.10 19 635 5.0E-155 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 398 505 1.6E-12 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 18 267 2.7E-51 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 Pfam PF00550 Phosphopantetheine attachment site 1298 1360 4.1E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 SMART SM00825 Beta-ketoacyl synthase 19 447 9.0E-114 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TMO_c0608 480d2bb36815115781df1b3444cb86b3 1413 Gene3D G3DSA:1.10.1200.10 1273 1367 1.4E-14 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0309 d44f1222fd3d405fcea45746fca6ca92 190 SUPERFAMILY SSF88659 109 185 4.36E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_b0309 d44f1222fd3d405fcea45746fca6ca92 190 Gene3D G3DSA:1.10.10.10 101 187 8.0E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0309 d44f1222fd3d405fcea45746fca6ca92 190 Gene3D G3DSA:1.10.1740.10 12 91 3.9E-5 T 14-10-2018 TMO_b0309 d44f1222fd3d405fcea45746fca6ca92 190 Pfam PF08281 Sigma-70, region 4 127 179 4.7E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_b0309 d44f1222fd3d405fcea45746fca6ca92 190 Pfam PF04542 Sigma-70 region 2 29 94 3.4E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_b0309 d44f1222fd3d405fcea45746fca6ca92 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 182 1.4E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_b0309 d44f1222fd3d405fcea45746fca6ca92 190 SUPERFAMILY SSF88946 18 109 2.79E-11 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_a0507 49b5b5e44df065927c97274965f2f774 282 SUPERFAMILY SSF52096 2 262 4.55E-63 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0507 49b5b5e44df065927c97274965f2f774 282 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 238 3.5E-38 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_a0507 49b5b5e44df065927c97274965f2f774 282 Gene3D G3DSA:3.90.226.10 3 265 1.8E-64 T 14-10-2018 TMO_0711 5400e2a21a552ae96dfee8b0fb3cc729 923 Pfam PF02563 Polysaccharide biosynthesis/export protein 178 239 2.7E-7 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 TMO_0711 5400e2a21a552ae96dfee8b0fb3cc729 923 Gene3D G3DSA:3.10.560.10 582 668 2.9E-10 T 14-10-2018 TMO_0711 5400e2a21a552ae96dfee8b0fb3cc729 923 Gene3D G3DSA:3.10.560.10 249 336 7.7E-17 T 14-10-2018 TMO_0711 5400e2a21a552ae96dfee8b0fb3cc729 923 Gene3D G3DSA:3.10.560.10 669 813 5.1E-9 T 14-10-2018 TMO_0711 5400e2a21a552ae96dfee8b0fb3cc729 923 Pfam PF06251 Capsule biosynthesis GfcC 692 891 7.3E-16 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 TMO_0711 5400e2a21a552ae96dfee8b0fb3cc729 923 Pfam PF10531 SLBB domain 341 379 0.0075 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_0711 5400e2a21a552ae96dfee8b0fb3cc729 923 Pfam PF10531 SLBB domain 258 309 1.6E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_0711 5400e2a21a552ae96dfee8b0fb3cc729 923 Pfam PF10531 SLBB domain 587 630 1.5E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_0711 5400e2a21a552ae96dfee8b0fb3cc729 923 Gene3D G3DSA:3.10.560.10 814 888 2.8E-8 T 14-10-2018 TMO_1716 db55bf74eccf66e0ac62e3bc857a2286 328 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 1.9E-51 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_1716 db55bf74eccf66e0ac62e3bc857a2286 328 Gene3D G3DSA:3.40.50.920 191 325 1.0E-50 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_1716 db55bf74eccf66e0ac62e3bc857a2286 328 SMART SM00861 4 179 7.0E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_1716 db55bf74eccf66e0ac62e3bc857a2286 328 Gene3D G3DSA:3.40.50.970 3 190 2.4E-86 T 14-10-2018 TMO_1716 db55bf74eccf66e0ac62e3bc857a2286 328 SUPERFAMILY SSF52922 188 325 1.26E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_1716 db55bf74eccf66e0ac62e3bc857a2286 328 SUPERFAMILY SSF52518 3 191 3.24E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_1716 db55bf74eccf66e0ac62e3bc857a2286 328 Pfam PF02780 Transketolase, C-terminal domain 194 316 4.8E-43 T 14-10-2018 IPR033248 Transketolase, C-terminal domain TMO_2416 a3cf8a54983f197ed861d0a57a6988cf 769 Gene3D G3DSA:3.20.20.210 398 765 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TMO_2416 a3cf8a54983f197ed861d0a57a6988cf 769 Gene3D G3DSA:3.20.20.210 11 533 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TMO_2416 a3cf8a54983f197ed861d0a57a6988cf 769 PIRSF PIRSF000382 5 769 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 TMO_2416 a3cf8a54983f197ed861d0a57a6988cf 769 SUPERFAMILY SSF51726 405 766 7.46E-120 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TMO_2416 a3cf8a54983f197ed861d0a57a6988cf 769 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 440 762 1.7E-145 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 TMO_2416 a3cf8a54983f197ed861d0a57a6988cf 769 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 11 766 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 TMO_2416 a3cf8a54983f197ed861d0a57a6988cf 769 SUPERFAMILY SSF51726 8 403 8.24E-106 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TMO_2416 a3cf8a54983f197ed861d0a57a6988cf 769 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 6 767 36.047 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 TMO_2416 a3cf8a54983f197ed861d0a57a6988cf 769 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 9 320 7.5E-108 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 TMO_c0846 d5ad03770adb81dc777486d510bdd7e9 382 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 104 360 5.2E-69 T 14-10-2018 IPR019285 Protein of unknown function DUF2336 TMO_c0846 d5ad03770adb81dc777486d510bdd7e9 382 PIRSF PIRSF035865 14 382 2.9E-76 T 14-10-2018 IPR014598 Uncharacterised conserved protein UCP035865 TMO_a0072 94e4c96466fffece0259ba5ee2b409e0 234 Pfam PF00005 ABC transporter 24 171 6.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0072 94e4c96466fffece0259ba5ee2b409e0 234 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0072 94e4c96466fffece0259ba5ee2b409e0 234 SUPERFAMILY SSF52540 24 208 1.5E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0072 94e4c96466fffece0259ba5ee2b409e0 234 SMART SM00382 29 224 2.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0072 94e4c96466fffece0259ba5ee2b409e0 234 Gene3D G3DSA:3.40.50.300 20 226 2.1E-48 T 14-10-2018 TMO_a0072 94e4c96466fffece0259ba5ee2b409e0 234 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 33 46 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 SMART SM01340 213 331 1.6E-55 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 Gene3D G3DSA:3.30.1370.100 499 594 2.8E-57 T 14-10-2018 TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 SUPERFAMILY SSF118116 451 641 5.23E-60 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 Gene3D G3DSA:2.30.42.20 458 636 2.8E-57 T 14-10-2018 TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 Gene3D G3DSA:3.30.565.10 2 212 1.0E-59 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 Gene3D G3DSA:3.30.230.10 218 330 3.7E-32 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 639 27.586 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 SUPERFAMILY SSF55874 3 203 1.06E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 Pfam PF08676 MutL C terminal dimerisation domain 452 599 3.3E-48 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 311 1.2E-88 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 SUPERFAMILY SSF54211 207 331 2.05E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 SMART SM00853 456 599 3.7E-55 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 125 2.5E-10 T 14-10-2018 TMO_2885 3f1ea1259bca231615ac9b502f7fcb7d 642 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 215 330 2.3E-35 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 TMO_1670 6eb6e55c9b778fb6093f5a0989c03b06 97 Pfam PF01381 Helix-turn-helix 19 68 1.2E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_1670 6eb6e55c9b778fb6093f5a0989c03b06 97 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 82 3.9E-33 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TMO_1670 6eb6e55c9b778fb6093f5a0989c03b06 97 SUPERFAMILY SSF47413 9 83 1.78E-25 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_1670 6eb6e55c9b778fb6093f5a0989c03b06 97 SMART SM00530 13 69 3.1E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_1670 6eb6e55c9b778fb6093f5a0989c03b06 97 Gene3D G3DSA:1.10.260.40 2 95 1.0E-30 T 14-10-2018 TMO_c0350 c1cb014171466c15bed7e1513c873763 242 Pfam PF07729 FCD domain 92 210 1.6E-23 T 14-10-2018 IPR011711 GntR, C-terminal TMO_c0350 c1cb014171466c15bed7e1513c873763 242 Gene3D G3DSA:1.10.10.10 15 82 7.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0350 c1cb014171466c15bed7e1513c873763 242 SUPERFAMILY SSF48008 87 220 9.42E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_c0350 c1cb014171466c15bed7e1513c873763 242 SMART SM00895 91 214 2.0E-17 T 14-10-2018 IPR011711 GntR, C-terminal TMO_c0350 c1cb014171466c15bed7e1513c873763 242 SMART SM00345 23 81 2.5E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0350 c1cb014171466c15bed7e1513c873763 242 Gene3D G3DSA:1.20.120.530 85 223 1.2E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_c0350 c1cb014171466c15bed7e1513c873763 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 77 3.6E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0350 c1cb014171466c15bed7e1513c873763 242 SUPERFAMILY SSF46785 16 85 1.65E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0394 8e12ab037861cc9c924cd4e521e6190a 298 SUPERFAMILY SSF53850 94 295 8.69E-33 T 14-10-2018 TMO_0394 8e12ab037861cc9c924cd4e521e6190a 298 SUPERFAMILY SSF46785 6 89 1.36E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0394 8e12ab037861cc9c924cd4e521e6190a 298 Gene3D G3DSA:3.40.190.10 165 263 1.2E-47 T 14-10-2018 TMO_0394 8e12ab037861cc9c924cd4e521e6190a 298 Gene3D G3DSA:3.40.190.10 106 289 1.2E-47 T 14-10-2018 TMO_0394 8e12ab037861cc9c924cd4e521e6190a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0394 8e12ab037861cc9c924cd4e521e6190a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0394 8e12ab037861cc9c924cd4e521e6190a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0394 8e12ab037861cc9c924cd4e521e6190a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0394 8e12ab037861cc9c924cd4e521e6190a 298 Gene3D G3DSA:1.10.10.10 9 104 5.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0394 8e12ab037861cc9c924cd4e521e6190a 298 Pfam PF03466 LysR substrate binding domain 94 292 7.8E-30 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2570 c8d7b6eadb2fbdfb28c2702680be4370 355 SUPERFAMILY SSF51735 140 345 3.94E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2570 c8d7b6eadb2fbdfb28c2702680be4370 355 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 14 130 3.8E-26 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_2570 c8d7b6eadb2fbdfb28c2702680be4370 355 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 4.4E-15 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_2570 c8d7b6eadb2fbdfb28c2702680be4370 355 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 193 4.4E-15 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_2570 c8d7b6eadb2fbdfb28c2702680be4370 355 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 283 294 4.4E-15 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_2570 c8d7b6eadb2fbdfb28c2702680be4370 355 PIRSF PIRSF000188 1 352 5.0E-144 T 14-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 TMO_2570 c8d7b6eadb2fbdfb28c2702680be4370 355 Gene3D G3DSA:3.40.50.720 134 335 1.0E-136 T 14-10-2018 TMO_2570 c8d7b6eadb2fbdfb28c2702680be4370 355 SUPERFAMILY SSF53223 5 143 1.02E-44 T 14-10-2018 TMO_2570 c8d7b6eadb2fbdfb28c2702680be4370 355 Gene3D G3DSA:3.40.50.10860 10 342 1.0E-136 T 14-10-2018 TMO_2570 c8d7b6eadb2fbdfb28c2702680be4370 355 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 218 329 1.2E-8 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_2570 c8d7b6eadb2fbdfb28c2702680be4370 355 SMART SM00839 141 350 7.1E-66 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TMO_1869 87015abcc6808c5f02d5f167ccbfeebe 91 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 20 91 22.123 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1869 87015abcc6808c5f02d5f167ccbfeebe 91 Pfam PF01084 Ribosomal protein S18 38 86 2.1E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1869 87015abcc6808c5f02d5f167ccbfeebe 91 ProSitePatterns PS00057 Ribosomal protein S18 signature. 39 62 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1869 87015abcc6808c5f02d5f167ccbfeebe 91 Gene3D G3DSA:4.10.640.10 6 91 6.6E-30 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1869 87015abcc6808c5f02d5f167ccbfeebe 91 PRINTS PR00974 Ribosomal protein S18 family signature 56 63 7.6E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1869 87015abcc6808c5f02d5f167ccbfeebe 91 PRINTS PR00974 Ribosomal protein S18 family signature 78 88 7.6E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1869 87015abcc6808c5f02d5f167ccbfeebe 91 PRINTS PR00974 Ribosomal protein S18 family signature 64 78 7.6E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1869 87015abcc6808c5f02d5f167ccbfeebe 91 PRINTS PR00974 Ribosomal protein S18 family signature 46 56 7.6E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1869 87015abcc6808c5f02d5f167ccbfeebe 91 SUPERFAMILY SSF46911 18 90 1.83E-28 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1869 87015abcc6808c5f02d5f167ccbfeebe 91 TIGRFAM TIGR00165 S18: ribosomal protein bS18 22 90 2.1E-30 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1869 87015abcc6808c5f02d5f167ccbfeebe 91 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 39 70 2.0E-10 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2299 bab44ee23197c247da36f751ecd465ea 563 Pfam PF02540 NAD synthase 279 535 5.0E-67 T 14-10-2018 IPR022310 NAD/GMP synthase TMO_2299 bab44ee23197c247da36f751ecd465ea 563 TIGRFAM TIGR00552 nadE: NAD+ synthetase 286 539 1.9E-56 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 TMO_2299 bab44ee23197c247da36f751ecd465ea 563 SUPERFAMILY SSF52402 275 544 7.28E-76 T 14-10-2018 TMO_2299 bab44ee23197c247da36f751ecd465ea 563 Pfam PF00795 Carbon-nitrogen hydrolase 15 260 4.4E-30 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TMO_2299 bab44ee23197c247da36f751ecd465ea 563 Gene3D G3DSA:3.60.110.10 10 278 7.9E-81 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_2299 bab44ee23197c247da36f751ecd465ea 563 SUPERFAMILY SSF56317 13 253 1.96E-58 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_2299 bab44ee23197c247da36f751ecd465ea 563 PIRSF PIRSF006630 11 563 2.6E-179 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TMO_2299 bab44ee23197c247da36f751ecd465ea 563 Gene3D G3DSA:3.40.50.620 279 563 1.3E-113 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_2299 bab44ee23197c247da36f751ecd465ea 563 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 14 561 28.473 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TMO_2953 8649a1cb590f2bbe6ef54ef3801cf744 347 Gene3D G3DSA:3.40.190.10 33 335 5.1E-50 T 14-10-2018 TMO_2953 8649a1cb590f2bbe6ef54ef3801cf744 347 SUPERFAMILY SSF53850 30 341 3.47E-79 T 14-10-2018 TMO_2953 8649a1cb590f2bbe6ef54ef3801cf744 347 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 36 324 1.6E-69 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 TMO_2953 8649a1cb590f2bbe6ef54ef3801cf744 347 Gene3D G3DSA:3.40.190.100 119 268 5.1E-50 T 14-10-2018 TMO_c0515 1a6f0dbbff358fe091dd65ece8807b0c 145 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site TMO_c0515 1a6f0dbbff358fe091dd65ece8807b0c 145 SMART SM00344 6 111 2.4E-18 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_c0515 1a6f0dbbff358fe091dd65ece8807b0c 145 Pfam PF01037 Lrp/AsnC ligand binding domain 71 140 6.1E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_c0515 1a6f0dbbff358fe091dd65ece8807b0c 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.6E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0515 1a6f0dbbff358fe091dd65ece8807b0c 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.6E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0515 1a6f0dbbff358fe091dd65ece8807b0c 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.6E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0515 1a6f0dbbff358fe091dd65ece8807b0c 145 SUPERFAMILY SSF54909 67 143 2.01E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_c0515 1a6f0dbbff358fe091dd65ece8807b0c 145 SUPERFAMILY SSF46785 6 61 1.34E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0515 1a6f0dbbff358fe091dd65ece8807b0c 145 Pfam PF13404 AsnC-type helix-turn-helix domain 6 47 7.2E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0515 1a6f0dbbff358fe091dd65ece8807b0c 145 Gene3D G3DSA:1.10.10.10 1 59 1.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0515 1a6f0dbbff358fe091dd65ece8807b0c 145 Gene3D G3DSA:3.30.70.920 61 145 2.4E-18 T 14-10-2018 TMO_2443 5d15cc16716c1e197df6b6e614aa58bd 168 Gene3D G3DSA:3.40.630.30 8 166 9.4E-36 T 14-10-2018 TMO_2443 5d15cc16716c1e197df6b6e614aa58bd 168 SUPERFAMILY SSF55729 10 150 6.18E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2443 5d15cc16716c1e197df6b6e614aa58bd 168 Pfam PF00583 Acetyltransferase (GNAT) family 27 145 1.2E-13 T 14-10-2018 IPR000182 GNAT domain TMO_b0210 21c6676b8c22a222217764804ffb8017 238 Pfam PF00027 Cyclic nucleotide-binding domain 38 124 3.0E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_b0210 21c6676b8c22a222217764804ffb8017 238 SMART SM00100 19 137 1.6E-21 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_b0210 21c6676b8c22a222217764804ffb8017 238 Gene3D G3DSA:2.60.120.10 9 154 1.1E-34 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_b0210 21c6676b8c22a222217764804ffb8017 238 SUPERFAMILY SSF46785 154 233 1.34E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0210 21c6676b8c22a222217764804ffb8017 238 Pfam PF13545 Crp-like helix-turn-helix domain 158 230 1.9E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_b0210 21c6676b8c22a222217764804ffb8017 238 Gene3D G3DSA:1.10.10.10 155 236 9.7E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0210 21c6676b8c22a222217764804ffb8017 238 SUPERFAMILY SSF51206 13 149 1.19E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like TMO_0753 db824938c04009c20428805bebbde430 307 Pfam PF08443 RimK-like ATP-grasp domain 104 266 6.2E-17 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 TMO_0753 db824938c04009c20428805bebbde430 307 Gene3D G3DSA:3.30.1490.20 73 175 3.3E-6 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_0753 db824938c04009c20428805bebbde430 307 SUPERFAMILY SSF56059 103 272 4.65E-32 T 14-10-2018 TMO_0753 db824938c04009c20428805bebbde430 307 Gene3D G3DSA:3.30.470.20 178 289 3.6E-22 T 14-10-2018 TMO_b0457 c7fab06f58bf78f096dd138bdbf2629f 422 SMART SM00852 190 328 4.8E-34 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_b0457 c7fab06f58bf78f096dd138bdbf2629f 422 Gene3D G3DSA:3.40.980.10 185 338 4.3E-112 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_b0457 c7fab06f58bf78f096dd138bdbf2629f 422 SUPERFAMILY SSF63867 336 413 3.27E-13 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_b0457 c7fab06f58bf78f096dd138bdbf2629f 422 Pfam PF00994 Probable molybdopterin binding domain 190 323 2.1E-21 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_b0457 c7fab06f58bf78f096dd138bdbf2629f 422 SUPERFAMILY SSF53218 188 332 1.96E-36 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_b0457 c7fab06f58bf78f096dd138bdbf2629f 422 SUPERFAMILY SSF63882 14 185 2.09E-45 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_b0457 c7fab06f58bf78f096dd138bdbf2629f 422 Pfam PF03454 MoeA C-terminal region (domain IV) 351 412 8.7E-11 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_b0457 c7fab06f58bf78f096dd138bdbf2629f 422 Gene3D G3DSA:2.170.190.11 58 151 4.3E-112 T 14-10-2018 TMO_b0457 c7fab06f58bf78f096dd138bdbf2629f 422 Gene3D G3DSA:3.90.105.10 35 184 4.3E-112 T 14-10-2018 TMO_b0457 c7fab06f58bf78f096dd138bdbf2629f 422 Gene3D G3DSA:2.40.340.10 339 407 4.3E-112 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_b0457 c7fab06f58bf78f096dd138bdbf2629f 422 Pfam PF03453 MoeA N-terminal region (domain I and II) 17 177 1.1E-37 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_c0279 70be23959a9816e43f15abc5d7eeba00 329 Gene3D G3DSA:1.10.620.20 15 322 8.1E-103 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 TMO_c0279 70be23959a9816e43f15abc5d7eeba00 329 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 24 311 1.9E-58 T 14-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF TMO_a0441 853ea383187473e5a41843c775eee3d2 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 388 1.6E-45 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_a0441 853ea383187473e5a41843c775eee3d2 391 PIRSF PIRSF016578 234 390 2.1E-11 T 14-10-2018 TMO_a0441 853ea383187473e5a41843c775eee3d2 391 PIRSF PIRSF016578 4 201 0.0082 T 14-10-2018 TMO_a0441 853ea383187473e5a41843c775eee3d2 391 Gene3D G3DSA:1.10.540.10 8 124 2.9E-29 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_a0441 853ea383187473e5a41843c775eee3d2 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 121 1.5E-26 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_a0441 853ea383187473e5a41843c775eee3d2 391 Gene3D G3DSA:2.40.110.10 125 246 1.5E-37 T 14-10-2018 TMO_a0441 853ea383187473e5a41843c775eee3d2 391 SUPERFAMILY SSF56645 10 251 5.1E-66 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_a0441 853ea383187473e5a41843c775eee3d2 391 SUPERFAMILY SSF47203 238 391 3.22E-53 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_a0441 853ea383187473e5a41843c775eee3d2 391 Gene3D G3DSA:1.20.140.10 247 391 1.8E-52 T 14-10-2018 TMO_a0441 853ea383187473e5a41843c775eee3d2 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 228 1.3E-20 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_0720 b55fb41a87a467db6b0b16f44ba62f80 182 Pfam PF13592 Winged helix-turn helix 108 165 4.4E-20 T 14-10-2018 IPR025959 Winged helix-turn helix domain TMO_0720 b55fb41a87a467db6b0b16f44ba62f80 182 Pfam PF13551 Winged helix-turn helix 31 91 8.2E-11 T 14-10-2018 TMO_0720 b55fb41a87a467db6b0b16f44ba62f80 182 SUPERFAMILY SSF46689 20 141 3.94E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0117 a6e0989d2226bdcc0bf781e59aa6b70c 327 SUPERFAMILY SSF103481 217 315 1.44E-13 T 14-10-2018 TMO_a0117 a6e0989d2226bdcc0bf781e59aa6b70c 327 SUPERFAMILY SSF103481 59 162 3.79E-14 T 14-10-2018 TMO_a0117 a6e0989d2226bdcc0bf781e59aa6b70c 327 Pfam PF00892 EamA-like transporter family 26 158 1.0E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_a0117 a6e0989d2226bdcc0bf781e59aa6b70c 327 Pfam PF00892 EamA-like transporter family 177 309 1.2E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1363 86c93e9df0fdcbc3bf85fe60e8f6080a 292 SUPERFAMILY SSF53850 94 290 6.88E-34 T 14-10-2018 TMO_1363 86c93e9df0fdcbc3bf85fe60e8f6080a 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1363 86c93e9df0fdcbc3bf85fe60e8f6080a 292 Gene3D G3DSA:3.40.190.10 164 258 2.0E-44 T 14-10-2018 TMO_1363 86c93e9df0fdcbc3bf85fe60e8f6080a 292 Pfam PF03466 LysR substrate binding domain 92 287 1.2E-30 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1363 86c93e9df0fdcbc3bf85fe60e8f6080a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1363 86c93e9df0fdcbc3bf85fe60e8f6080a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1363 86c93e9df0fdcbc3bf85fe60e8f6080a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1363 86c93e9df0fdcbc3bf85fe60e8f6080a 292 SUPERFAMILY SSF46785 8 115 3.45E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1363 86c93e9df0fdcbc3bf85fe60e8f6080a 292 Gene3D G3DSA:3.40.190.10 104 283 2.0E-44 T 14-10-2018 TMO_1363 86c93e9df0fdcbc3bf85fe60e8f6080a 292 Gene3D G3DSA:1.10.10.10 9 98 5.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2240 50c44da4b49ce60a292324424559b836 344 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 81 3.8E-15 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_2240 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 2.2E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_2240 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 298 306 2.2E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_2240 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 156 2.2E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_2240 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 2.2E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_2240 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 133 145 2.2E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_2240 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 2.2E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_2240 50c44da4b49ce60a292324424559b836 344 SUPERFAMILY SSF63380 103 198 1.11E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TMO_2240 50c44da4b49ce60a292324424559b836 344 Gene3D G3DSA:2.40.30.10 96 195 1.7E-25 T 14-10-2018 TMO_2240 50c44da4b49ce60a292324424559b836 344 Pfam PF00970 Oxidoreductase FAD-binding domain 106 197 1.0E-11 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 TMO_2240 50c44da4b49ce60a292324424559b836 344 Gene3D G3DSA:3.40.50.80 200 331 1.0E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_2240 50c44da4b49ce60a292324424559b836 344 SUPERFAMILY SSF54292 4 89 5.77E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_2240 50c44da4b49ce60a292324424559b836 344 Gene3D G3DSA:3.10.20.30 1 90 4.8E-25 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_2240 50c44da4b49ce60a292324424559b836 344 Pfam PF00175 Oxidoreductase NAD-binding domain 210 311 1.8E-19 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TMO_2240 50c44da4b49ce60a292324424559b836 344 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TMO_2240 50c44da4b49ce60a292324424559b836 344 SUPERFAMILY SSF52343 201 331 4.58E-38 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_2540 b47642f43d5bfe47a425fd6d38beba1e 385 Gene3D G3DSA:3.40.50.2000 20 378 1.6E-58 T 14-10-2018 TMO_2540 b47642f43d5bfe47a425fd6d38beba1e 385 SUPERFAMILY SSF53756 11 379 4.45E-69 T 14-10-2018 TMO_2540 b47642f43d5bfe47a425fd6d38beba1e 385 Pfam PF00534 Glycosyl transferases group 1 199 358 8.4E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 TMO_2540 b47642f43d5bfe47a425fd6d38beba1e 385 Gene3D G3DSA:3.40.50.2000 188 362 1.6E-58 T 14-10-2018 TMO_2540 b47642f43d5bfe47a425fd6d38beba1e 385 Pfam PF13439 Glycosyltransferase Family 4 21 188 5.7E-24 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TMO_c0139 f6648d8a39bfacc94cbf21130b5fc099 302 Gene3D G3DSA:3.20.10.10 134 290 6.8E-42 T 14-10-2018 TMO_c0139 f6648d8a39bfacc94cbf21130b5fc099 302 SUPERFAMILY SSF56752 6 288 4.06E-88 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 TMO_c0139 f6648d8a39bfacc94cbf21130b5fc099 302 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 221 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 TMO_c0139 f6648d8a39bfacc94cbf21130b5fc099 302 Pfam PF01063 Amino-transferase class IV 40 266 1.5E-50 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 TMO_c0139 f6648d8a39bfacc94cbf21130b5fc099 302 Gene3D G3DSA:3.30.470.10 5 130 5.7E-42 T 14-10-2018 TMO_c0139 f6648d8a39bfacc94cbf21130b5fc099 302 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 14 289 4.3E-82 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 280 5.3E-62 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 Gene3D G3DSA:3.40.50.720 93 282 5.3E-119 T 14-10-2018 TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 SUPERFAMILY SSF52283 1 135 6.05E-37 T 14-10-2018 TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 312 1.2E-34 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 SUPERFAMILY SSF55021 445 520 1.25E-14 T 14-10-2018 TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 Gene3D G3DSA:3.40.50.720 4 291 5.3E-119 T 14-10-2018 TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 Gene3D G3DSA:3.30.1330.90 318 450 6.5E-37 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 SUPERFAMILY SSF143548 318 446 5.75E-36 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 520 8.1E-203 T 14-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 Pfam PF01842 ACT domain 453 515 5.6E-8 T 14-10-2018 IPR002912 ACT domain TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 Gene3D G3DSA:3.30.70.260 452 524 3.4E-17 T 14-10-2018 TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 SUPERFAMILY SSF51735 97 281 1.3E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0919 c457f7355a8b450fc9d829a13d9a6a82 525 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 143 170 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TMO_a0132 5a0f2715ac51b9515593cb7ec363d545 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 90 1.2E-7 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_a0132 5a0f2715ac51b9515593cb7ec363d545 393 Gene3D G3DSA:1.20.140.10 220 393 6.2E-52 T 14-10-2018 TMO_a0132 5a0f2715ac51b9515593cb7ec363d545 393 SUPERFAMILY SSF56645 14 213 4.52E-32 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_a0132 5a0f2715ac51b9515593cb7ec363d545 393 Gene3D G3DSA:2.40.110.10 116 213 2.0E-22 T 14-10-2018 TMO_a0132 5a0f2715ac51b9515593cb7ec363d545 393 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 232 367 9.4E-17 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain TMO_a0132 5a0f2715ac51b9515593cb7ec363d545 393 Gene3D G3DSA:1.10.540.10 9 109 2.2E-18 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_a0132 5a0f2715ac51b9515593cb7ec363d545 393 PIRSF PIRSF016578 2 382 1.8E-32 T 14-10-2018 TMO_a0132 5a0f2715ac51b9515593cb7ec363d545 393 SUPERFAMILY SSF47203 225 370 1.45E-17 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_0363 811cfb585d9f9f8b7c3bb82959b12e8b 296 SUPERFAMILY SSF53850 92 293 3.64E-43 T 14-10-2018 TMO_0363 811cfb585d9f9f8b7c3bb82959b12e8b 296 Gene3D G3DSA:1.10.10.10 3 90 1.3E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0363 811cfb585d9f9f8b7c3bb82959b12e8b 296 Gene3D G3DSA:3.40.190.290 92 294 3.2E-56 T 14-10-2018 TMO_0363 811cfb585d9f9f8b7c3bb82959b12e8b 296 Pfam PF03466 LysR substrate binding domain 90 292 3.1E-47 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0363 811cfb585d9f9f8b7c3bb82959b12e8b 296 SUPERFAMILY SSF46785 2 112 2.09E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0363 811cfb585d9f9f8b7c3bb82959b12e8b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0363 811cfb585d9f9f8b7c3bb82959b12e8b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0363 811cfb585d9f9f8b7c3bb82959b12e8b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0363 811cfb585d9f9f8b7c3bb82959b12e8b 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.0E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0195 2b05d0cc4bb909f6eb7952d30cb4911a 255 SUPERFAMILY SSF52540 4 210 1.91E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0195 2b05d0cc4bb909f6eb7952d30cb4911a 255 SMART SM00382 27 220 7.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0195 2b05d0cc4bb909f6eb7952d30cb4911a 255 Gene3D G3DSA:3.40.50.300 3 250 3.3E-56 T 14-10-2018 TMO_c0195 2b05d0cc4bb909f6eb7952d30cb4911a 255 Pfam PF00005 ABC transporter 20 157 1.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0195 2b05d0cc4bb909f6eb7952d30cb4911a 255 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0328 153e31ae2e33ef6d2fa4264275f68490 158 Pfam PF07681 DoxX 24 106 5.7E-11 T 14-10-2018 IPR032808 DoxX family TMO_2123 802072ba01f8c4ec73a829c2f113890b 593 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 541 557 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 TMO_2123 802072ba01f8c4ec73a829c2f113890b 593 Pfam PF03600 Citrate transporter 16 540 1.9E-44 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 TMO_2123 802072ba01f8c4ec73a829c2f113890b 593 SUPERFAMILY SSF116726 213 292 5.75E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TMO_2123 802072ba01f8c4ec73a829c2f113890b 593 SUPERFAMILY SSF116726 304 387 2.35E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TMO_2123 802072ba01f8c4ec73a829c2f113890b 593 Gene3D G3DSA:3.30.70.1450 217 293 9.2E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TMO_2123 802072ba01f8c4ec73a829c2f113890b 593 Gene3D G3DSA:3.30.70.1450 309 384 1.1E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TMO_2123 802072ba01f8c4ec73a829c2f113890b 593 Pfam PF02080 TrkA-C domain 313 380 1.2E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_2123 802072ba01f8c4ec73a829c2f113890b 593 Pfam PF02080 TrkA-C domain 220 284 3.8E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 16 663 1.2E-260 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 Pfam PF02779 Transketolase, pyrimidine binding domain 358 529 4.4E-49 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 SUPERFAMILY SSF52518 11 324 4.31E-115 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 SUPERFAMILY SSF52922 540 666 4.58E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 SUPERFAMILY SSF52518 352 531 2.95E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 Gene3D G3DSA:3.40.50.970 332 537 8.9E-81 T 14-10-2018 TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 SMART SM00861 359 530 5.7E-69 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 Pfam PF02780 Transketolase, C-terminal domain 554 659 1.9E-12 T 14-10-2018 IPR033248 Transketolase, C-terminal domain TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 16 338 2.4E-139 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 Gene3D G3DSA:3.40.50.920 543 667 1.5E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 ProSitePatterns PS00801 Transketolase signature 1. 22 42 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TMO_0886 4e331445ca0b3dfc24f4aff1cb814e93 667 Gene3D G3DSA:3.40.50.970 12 331 9.8E-117 T 14-10-2018 TMO_c0416 f7622f2512fe0ed2ac43c518a5c2a140 397 Pfam PF07690 Major Facilitator Superfamily 11 278 5.5E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0416 f7622f2512fe0ed2ac43c518a5c2a140 397 SUPERFAMILY SSF103473 5 392 4.19E-40 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0416 f7622f2512fe0ed2ac43c518a5c2a140 397 PRINTS PR01035 Tetracycline resistance protein signature 255 275 1.6E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_c0416 f7622f2512fe0ed2ac43c518a5c2a140 397 PRINTS PR01035 Tetracycline resistance protein signature 307 327 1.6E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_c0416 f7622f2512fe0ed2ac43c518a5c2a140 397 PRINTS PR01035 Tetracycline resistance protein signature 342 365 1.6E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_c0416 f7622f2512fe0ed2ac43c518a5c2a140 397 PRINTS PR01035 Tetracycline resistance protein signature 42 61 1.6E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_c0416 f7622f2512fe0ed2ac43c518a5c2a140 397 Gene3D G3DSA:1.20.1250.20 1 392 1.7E-38 T 14-10-2018 TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 Gene3D G3DSA:1.20.1260.10 1 157 8.6E-72 T 14-10-2018 IPR012347 Ferritin-like TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 SUPERFAMILY SSF47240 1 153 2.24E-53 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 3.8E-75 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 Pfam PF00210 Ferritin-like domain 8 142 1.3E-40 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 128 149 1.5E-69 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 44 64 1.5E-69 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 3 22 1.5E-69 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 86 106 1.5E-69 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 65 85 1.5E-69 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 107 127 1.5E-69 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 23 43 1.5E-69 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_0620 ac3a3fe8e7257e086f09b3ae3946ff88 160 PIRSF PIRSF002560 1 157 1.1E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_0789 f86624feed0d205c19f35a6e329a8f6d 493 Gene3D G3DSA:1.25.40.80 164 275 3.3E-9 T 14-10-2018 TMO_0789 f86624feed0d205c19f35a6e329a8f6d 493 Gene3D G3DSA:1.10.579.10 289 472 1.8E-40 T 14-10-2018 TMO_0789 f86624feed0d205c19f35a6e329a8f6d 493 SUPERFAMILY SSF52425 8 136 1.09E-35 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 TMO_0789 f86624feed0d205c19f35a6e329a8f6d 493 Pfam PF03441 FAD binding domain of DNA photolyase 300 449 2.0E-32 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 TMO_0789 f86624feed0d205c19f35a6e329a8f6d 493 Gene3D G3DSA:3.40.50.620 2 143 4.3E-33 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_0789 f86624feed0d205c19f35a6e329a8f6d 493 SUPERFAMILY SSF48173 188 457 1.7E-45 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 TMO_0789 f86624feed0d205c19f35a6e329a8f6d 493 Pfam PF00875 DNA photolyase 10 134 2.7E-25 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 SUPERFAMILY SSF51905 3 305 2.06E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 Gene3D G3DSA:3.50.50.60 113 234 9.7E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 SUPERFAMILY SSF55424 308 398 1.07E-18 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 Gene3D G3DSA:3.50.50.60 5 296 9.7E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 Pfam PF14759 Reductase C-terminal 315 398 1.8E-18 T 14-10-2018 IPR028202 Reductase, C-terminal TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 4.4E-58 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 7.2E-26 T 14-10-2018 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 7.2E-26 T 14-10-2018 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 7.2E-26 T 14-10-2018 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 274 7.2E-26 T 14-10-2018 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 227 243 7.2E-26 T 14-10-2018 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 280 1.8E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 1.8E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 162 1.8E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 1.8E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_a0555 67e88ea29ac654e0df4ab739cbb651cd 415 Gene3D G3DSA:3.30.390.30 315 401 4.4E-17 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_b0165 434ad5a667bcfa873c9d30d66530d276 300 Gene3D G3DSA:3.40.710.10 39 299 3.5E-71 T 14-10-2018 TMO_b0165 434ad5a667bcfa873c9d30d66530d276 300 Pfam PF13354 Beta-lactamase enzyme family 65 267 4.1E-38 T 14-10-2018 TMO_b0165 434ad5a667bcfa873c9d30d66530d276 300 ProSitePatterns PS00146 Beta-lactamase class-A active site. 76 91 - T 14-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 TMO_b0165 434ad5a667bcfa873c9d30d66530d276 300 SUPERFAMILY SSF56601 39 295 6.44E-70 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_b0165 434ad5a667bcfa873c9d30d66530d276 300 PRINTS PR00118 Beta-lactamase class A signature 178 203 1.2E-53 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 TMO_b0165 434ad5a667bcfa873c9d30d66530d276 300 PRINTS PR00118 Beta-lactamase class A signature 43 67 1.2E-53 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 TMO_b0165 434ad5a667bcfa873c9d30d66530d276 300 PRINTS PR00118 Beta-lactamase class A signature 214 229 1.2E-53 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 TMO_b0165 434ad5a667bcfa873c9d30d66530d276 300 PRINTS PR00118 Beta-lactamase class A signature 116 141 1.2E-53 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 TMO_b0165 434ad5a667bcfa873c9d30d66530d276 300 PRINTS PR00118 Beta-lactamase class A signature 74 91 1.2E-53 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 TMO_b0165 434ad5a667bcfa873c9d30d66530d276 300 PRINTS PR00118 Beta-lactamase class A signature 152 176 1.2E-53 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 TMO_b0165 434ad5a667bcfa873c9d30d66530d276 300 PRINTS PR00118 Beta-lactamase class A signature 231 246 1.2E-53 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 TMO_1910 3ce7eaba1a1cc456ed2945e7671aaa85 448 Pfam PF02321 Outer membrane efflux protein 234 416 2.6E-31 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_1910 3ce7eaba1a1cc456ed2945e7671aaa85 448 Pfam PF02321 Outer membrane efflux protein 27 213 6.7E-29 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_1910 3ce7eaba1a1cc456ed2945e7671aaa85 448 Gene3D G3DSA:1.20.1600.10 25 430 2.1E-92 T 14-10-2018 TMO_1910 3ce7eaba1a1cc456ed2945e7671aaa85 448 SUPERFAMILY SSF56954 6 418 1.09E-84 T 14-10-2018 TMO_1910 3ce7eaba1a1cc456ed2945e7671aaa85 448 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 24 425 2.4E-97 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 TMO_2092 22069f584a191aa8bc717ad6843a69b8 284 SMART SM00382 34 265 3.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2092 22069f584a191aa8bc717ad6843a69b8 284 Gene3D G3DSA:3.40.50.300 1 260 1.7E-65 T 14-10-2018 TMO_2092 22069f584a191aa8bc717ad6843a69b8 284 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 10 255 8.9E-92 T 14-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 TMO_2092 22069f584a191aa8bc717ad6843a69b8 284 Pfam PF00005 ABC transporter 25 186 4.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2092 22069f584a191aa8bc717ad6843a69b8 284 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2092 22069f584a191aa8bc717ad6843a69b8 284 SUPERFAMILY SSF52540 8 248 5.92E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0493 c0f1e4c558f1cde55b9fa2f790973374 289 SUPERFAMILY SSF48179 167 286 5.44E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_c0493 c0f1e4c558f1cde55b9fa2f790973374 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 164 2.8E-41 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 TMO_c0493 c0f1e4c558f1cde55b9fa2f790973374 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 1.6E-34 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 TMO_c0493 c0f1e4c558f1cde55b9fa2f790973374 289 SUPERFAMILY SSF51735 5 165 4.12E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0493 c0f1e4c558f1cde55b9fa2f790973374 289 PIRSF PIRSF000103 1 288 4.6E-67 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 TMO_c0493 c0f1e4c558f1cde55b9fa2f790973374 289 Gene3D G3DSA:3.40.50.720 2 166 5.1E-50 T 14-10-2018 TMO_c0493 c0f1e4c558f1cde55b9fa2f790973374 289 Gene3D G3DSA:1.10.1040.10 167 288 6.6E-32 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_3020 9efbfdafb75836f5ab716740e58b63cb 338 Pfam PF13410 Glutathione S-transferase, C-terminal domain 211 279 3.3E-11 T 14-10-2018 TMO_3020 9efbfdafb75836f5ab716740e58b63cb 338 PIRSF PIRSF015753 4 330 6.2E-118 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 TMO_3020 9efbfdafb75836f5ab716740e58b63cb 338 Pfam PF13409 Glutathione S-transferase, N-terminal domain 57 162 6.7E-22 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_3020 9efbfdafb75836f5ab716740e58b63cb 338 SUPERFAMILY SSF52833 39 166 6.81E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_3020 9efbfdafb75836f5ab716740e58b63cb 338 Gene3D G3DSA:1.20.1050.10 187 332 1.0E-56 T 14-10-2018 TMO_3020 9efbfdafb75836f5ab716740e58b63cb 338 SUPERFAMILY SSF47616 189 324 1.38E-30 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_3020 9efbfdafb75836f5ab716740e58b63cb 338 Gene3D G3DSA:3.40.30.130 1 182 1.4E-65 T 14-10-2018 TMO_2907 50f0ce7d77feccb4bc731433bd898f5d 394 Gene3D G3DSA:3.50.50.60 7 364 1.4E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2907 50f0ce7d77feccb4bc731433bd898f5d 394 Gene3D G3DSA:3.30.9.10 95 322 1.4E-87 T 14-10-2018 TMO_2907 50f0ce7d77feccb4bc731433bd898f5d 394 Pfam PF01266 FAD dependent oxidoreductase 8 363 2.3E-45 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_2907 50f0ce7d77feccb4bc731433bd898f5d 394 SUPERFAMILY SSF51905 6 388 6.48E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1506 21b31c9fd279dfd7126d54418b769bf7 129 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 23 128 3.0E-32 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 TMO_1506 21b31c9fd279dfd7126d54418b769bf7 129 Pfam PF01521 Iron-sulphur cluster biosynthesis 23 123 7.3E-16 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 TMO_1506 21b31c9fd279dfd7126d54418b769bf7 129 SUPERFAMILY SSF89360 22 117 2.16E-25 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 TMO_1506 21b31c9fd279dfd7126d54418b769bf7 129 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 109 126 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 TMO_1506 21b31c9fd279dfd7126d54418b769bf7 129 Gene3D G3DSA:2.60.300.12 22 128 1.7E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 TMO_0464 262be1e9f1892d46082e8368aea4633e 287 Pfam PF13714 Phosphoenolpyruvate phosphomutase 2 231 9.3E-50 T 14-10-2018 TMO_0464 262be1e9f1892d46082e8368aea4633e 287 ProSitePatterns PS00161 Isocitrate lyase signature. 99 104 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 TMO_0464 262be1e9f1892d46082e8368aea4633e 287 SUPERFAMILY SSF51621 1 271 1.39E-90 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_0464 262be1e9f1892d46082e8368aea4633e 287 Gene3D G3DSA:3.20.20.60 1 274 4.4E-98 T 14-10-2018 TMO_0170 29c5b81641e43773ba2182684e185853 431 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 192 351 1.5E-83 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TMO_0170 29c5b81641e43773ba2182684e185853 431 PIRSF PIRSF001109 1 431 9.1E-202 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TMO_0170 29c5b81641e43773ba2182684e185853 431 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 7 423 5.8E-198 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TMO_0170 29c5b81641e43773ba2182684e185853 431 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 78 92 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TMO_0170 29c5b81641e43773ba2182684e185853 431 SMART SM00996 6 430 0.0 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TMO_0170 29c5b81641e43773ba2182684e185853 431 SMART SM00997 192 351 7.6E-116 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TMO_0170 29c5b81641e43773ba2182684e185853 431 Gene3D G3DSA:3.40.50.1480 145 198 2.5E-22 T 14-10-2018 TMO_0170 29c5b81641e43773ba2182684e185853 431 SUPERFAMILY SSF51735 192 351 1.23E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0170 29c5b81641e43773ba2182684e185853 431 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 2 423 50.354 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 TMO_0170 29c5b81641e43773ba2182684e185853 431 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 214 230 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TMO_0170 29c5b81641e43773ba2182684e185853 431 Gene3D G3DSA:3.40.50.720 199 347 4.0E-76 T 14-10-2018 TMO_0170 29c5b81641e43773ba2182684e185853 431 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 142 1.6E-73 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TMO_0170 29c5b81641e43773ba2182684e185853 431 Gene3D G3DSA:3.40.50.1480 1 144 3.5E-72 T 14-10-2018 TMO_0170 29c5b81641e43773ba2182684e185853 431 SUPERFAMILY SSF52283 4 431 1.08E-121 T 14-10-2018 TMO_0170 29c5b81641e43773ba2182684e185853 431 Gene3D G3DSA:3.40.50.1480 348 431 1.7E-40 T 14-10-2018 TMO_c0431 41cc81ffbeb6ccbfbe3e5c36a71266b5 257 SUPERFAMILY SSF52540 3 245 5.64E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0431 41cc81ffbeb6ccbfbe3e5c36a71266b5 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 223 245 6.2E-11 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_c0431 41cc81ffbeb6ccbfbe3e5c36a71266b5 257 Gene3D G3DSA:3.40.50.300 1 246 1.2E-58 T 14-10-2018 TMO_c0431 41cc81ffbeb6ccbfbe3e5c36a71266b5 257 SMART SM00382 29 223 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0431 41cc81ffbeb6ccbfbe3e5c36a71266b5 257 Pfam PF00005 ABC transporter 21 174 1.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3199 e2c2966bfa8241748d0092b49d40cc97 247 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 5 143 1.3E-44 T 14-10-2018 IPR010419 Carbon monoxide dehydrogenase subunit G TMO_3199 e2c2966bfa8241748d0092b49d40cc97 247 Gene3D G3DSA:3.30.530.20 1 155 3.4E-52 T 14-10-2018 IPR023393 START-like domain superfamily TMO_3199 e2c2966bfa8241748d0092b49d40cc97 247 SUPERFAMILY SSF55961 1 145 2.16E-47 T 14-10-2018 TMO_0386 d6cabd1e8fb74b90547e443dae6d7bdf 1119 SMART SM00869 847 1109 6.9E-46 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_0386 d6cabd1e8fb74b90547e443dae6d7bdf 1119 Pfam PF03797 Autotransporter beta-domain 850 1099 8.5E-54 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_0386 d6cabd1e8fb74b90547e443dae6d7bdf 1119 SUPERFAMILY SSF56219 38 402 2.52E-17 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TMO_0386 d6cabd1e8fb74b90547e443dae6d7bdf 1119 Pfam PF12951 Passenger-associated-transport-repeat 586 614 2.9E-9 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat TMO_0386 d6cabd1e8fb74b90547e443dae6d7bdf 1119 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 585 614 5.6E-11 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat TMO_0386 d6cabd1e8fb74b90547e443dae6d7bdf 1119 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 44 363 1.7E-7 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TMO_0386 d6cabd1e8fb74b90547e443dae6d7bdf 1119 SUPERFAMILY SSF51126 440 731 9.73E-29 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor TMO_0386 d6cabd1e8fb74b90547e443dae6d7bdf 1119 Gene3D G3DSA:2.40.128.130 825 1119 1.5E-67 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_0386 d6cabd1e8fb74b90547e443dae6d7bdf 1119 SUPERFAMILY SSF103515 802 1119 1.06E-63 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_0386 d6cabd1e8fb74b90547e443dae6d7bdf 1119 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 652 1119 8.5E-47 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 TMO_2527 8fb3aa173b077e76dc0d5186f078dcd0 182 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 163 2.6E-18 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_c0340 99d066aa5a98a03a61189ba04bd2a0a1 297 Pfam PF00561 alpha/beta hydrolase fold 24 279 5.8E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0340 99d066aa5a98a03a61189ba04bd2a0a1 297 SUPERFAMILY SSF53474 2 294 2.49E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0340 99d066aa5a98a03a61189ba04bd2a0a1 297 PRINTS PR00412 Epoxide hydrolase signature 272 294 5.0E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_c0340 99d066aa5a98a03a61189ba04bd2a0a1 297 PRINTS PR00412 Epoxide hydrolase signature 238 254 5.0E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_c0340 99d066aa5a98a03a61189ba04bd2a0a1 297 PRINTS PR00412 Epoxide hydrolase signature 50 65 5.0E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_c0340 99d066aa5a98a03a61189ba04bd2a0a1 297 PRINTS PR00412 Epoxide hydrolase signature 112 125 5.0E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_c0340 99d066aa5a98a03a61189ba04bd2a0a1 297 PRINTS PR00412 Epoxide hydrolase signature 30 48 5.0E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_c0340 99d066aa5a98a03a61189ba04bd2a0a1 297 PRINTS PR00412 Epoxide hydrolase signature 98 111 5.0E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_c0340 99d066aa5a98a03a61189ba04bd2a0a1 297 Gene3D G3DSA:3.40.50.1820 1 295 4.5E-75 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0500 ebaa4515e5cfd814e236b687cce2d573 202 PIRSF PIRSF036382 1 196 1.2E-47 T 14-10-2018 IPR008327 Signal transduction response regulator, antiterminator TMO_0500 ebaa4515e5cfd814e236b687cce2d573 202 Pfam PF03861 ANTAR domain 137 189 2.4E-13 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 TMO_0500 ebaa4515e5cfd814e236b687cce2d573 202 Gene3D G3DSA:3.40.50.2300 2 125 4.9E-35 T 14-10-2018 TMO_0500 ebaa4515e5cfd814e236b687cce2d573 202 SMART SM01012 134 189 5.5E-14 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 TMO_0500 ebaa4515e5cfd814e236b687cce2d573 202 Gene3D G3DSA:1.10.10.10 132 195 3.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0500 ebaa4515e5cfd814e236b687cce2d573 202 SUPERFAMILY SSF52172 4 189 1.42E-42 T 14-10-2018 IPR011006 CheY-like superfamily TMO_c0145 e4bf543e1ab45d9e988381ef4d34af12 118 Gene3D G3DSA:2.40.50.140 5 118 6.4E-32 T 14-10-2018 TMO_c0145 e4bf543e1ab45d9e988381ef4d34af12 118 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 12 117 1.1E-45 T 14-10-2018 IPR008231 Probable chaperone CsaA TMO_c0145 e4bf543e1ab45d9e988381ef4d34af12 118 SUPERFAMILY SSF50249 10 117 3.92E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_c0145 e4bf543e1ab45d9e988381ef4d34af12 118 Pfam PF01588 Putative tRNA binding domain 20 115 7.3E-12 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 TMO_c0759 e2d8a1ab2c55107e0309f0dbdf5c5c66 535 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 3 185 7.9E-78 T 14-10-2018 IPR009715 Regulator of RNA terminal phosphate cyclase TMO_c0759 e2d8a1ab2c55107e0309f0dbdf5c5c66 535 SUPERFAMILY SSF52540 189 438 6.41E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0759 e2d8a1ab2c55107e0309f0dbdf5c5c66 535 Gene3D G3DSA:1.10.8.60 363 444 5.1E-6 T 14-10-2018 TMO_c0759 e2d8a1ab2c55107e0309f0dbdf5c5c66 535 Pfam PF00158 Sigma-54 interaction domain 189 353 4.4E-47 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_c0759 e2d8a1ab2c55107e0309f0dbdf5c5c66 535 Gene3D G3DSA:3.40.50.300 173 361 1.2E-47 T 14-10-2018 TMO_c0759 e2d8a1ab2c55107e0309f0dbdf5c5c66 535 PIRSF PIRSF037354 2 532 5.6E-255 T 14-10-2018 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 TMO_c0759 e2d8a1ab2c55107e0309f0dbdf5c5c66 535 SMART SM00382 207 353 1.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0130 9efa6b4f4e271604646d5b599824e2e8 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 337 7.7E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_a0130 9efa6b4f4e271604646d5b599824e2e8 340 Gene3D G3DSA:1.10.3720.10 91 331 1.3E-17 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0130 9efa6b4f4e271604646d5b599824e2e8 340 SUPERFAMILY SSF161098 95 325 2.45E-13 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:2.20.25.90 238 290 4.8E-15 T 14-10-2018 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 SMART SM00929 101 141 8.3E-20 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 PIRSF PIRSF036643 15 946 0.0 T 14-10-2018 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 95 3.7E-24 T 14-10-2018 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:3.10.20.740 19 140 1.4E-41 T 14-10-2018 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 238 289 8.0E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 847 874 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF00384 Molybdopterin oxidoreductase 294 724 2.3E-73 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:3.40.50.740 299 768 3.0E-174 T 14-10-2018 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 210 221 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 242 917 8.7E-288 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:3.40.228.10 374 580 3.0E-174 T 14-10-2018 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:2.40.40.20 806 919 7.5E-34 T 14-10-2018 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:3.30.70.20 147 228 3.1E-22 T 14-10-2018 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 SUPERFAMILY SSF50692 775 918 6.33E-41 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 101 140 5.4E-17 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 SUPERFAMILY SSF53706 237 767 5.89E-190 T 14-10-2018 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF01568 Molydopterin dinucleotide binding domain 809 913 6.2E-28 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF13187 4Fe-4S dicluster domain 166 223 2.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 SUPERFAMILY SSF54292 19 92 1.01E-20 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 SMART SM00926 237 291 1.3E-14 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1021 2e9f4e7641a794175f00f39ee3ea3505 946 SUPERFAMILY SSF54862 93 232 4.18E-38 T 14-10-2018 TMO_b0016 3119c3b54f4d9f06a971bcf090b6c0bb 150 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 13 143 5.2E-36 T 14-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 TMO_b0016 3119c3b54f4d9f06a971bcf090b6c0bb 150 Pfam PF04717 Type VI secretion system, phage-baseplate injector 11 119 2.0E-36 T 14-10-2018 IPR006531 Gp5 N-terminal TMO_b0016 3119c3b54f4d9f06a971bcf090b6c0bb 150 Gene3D G3DSA:2.40.50.230 6 90 1.1E-32 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 SUPERFAMILY SSF81665 182 702 4.97E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 181 731 2.8E-148 T 14-10-2018 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 181 729 8.6E-173 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 ProSitePatterns PS01047 Heavy-metal-associated domain. 25 54 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 Gene3D G3DSA:2.70.150.20 225 337 1.7E-35 T 14-10-2018 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 Gene3D G3DSA:3.40.1110.10 444 559 4.5E-76 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 204 705 1.5E-71 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 PRINTS PR00941 Cadmium-transporting ATPase signature 34 55 1.1E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 PRINTS PR00941 Cadmium-transporting ATPase signature 216 236 1.1E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 PRINTS PR00941 Cadmium-transporting ATPase signature 298 314 1.1E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 PRINTS PR00941 Cadmium-transporting ATPase signature 317 331 1.1E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 SUPERFAMILY SSF81653 239 332 8.24E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 Pfam PF00122 E1-E2 ATPase 232 413 2.1E-51 T 14-10-2018 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 435 441 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 Pfam PF00702 haloacid dehalogenase-like hydrolase 429 640 5.7E-36 T 14-10-2018 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 Gene3D G3DSA:3.30.70.100 20 85 5.7E-13 T 14-10-2018 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 Gene3D G3DSA:3.40.50.1000 414 679 4.5E-76 T 14-10-2018 IPR023214 HAD superfamily TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 SUPERFAMILY SSF56784 431 727 4.46E-49 T 14-10-2018 IPR036412 HAD-like superfamily TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 Pfam PF00403 Heavy-metal-associated domain 23 84 2.3E-8 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 SUPERFAMILY SSF55008 20 86 3.14E-12 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 282 296 1.5E-26 T 14-10-2018 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 563 1.5E-26 T 14-10-2018 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 433 447 1.5E-26 T 14-10-2018 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 574 584 1.5E-26 T 14-10-2018 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 650 662 1.5E-26 T 14-10-2018 TMO_c0675 d7d29b628bb5258a9bc2fe1541ece196 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 627 646 1.5E-26 T 14-10-2018 TMO_1041 c71b301bf337453b19b591a8a5b9c74b 174 SUPERFAMILY SSF88659 91 165 4.36E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_1041 c71b301bf337453b19b591a8a5b9c74b 174 Pfam PF08281 Sigma-70, region 4 113 165 1.4E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_1041 c71b301bf337453b19b591a8a5b9c74b 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 164 2.4E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_1041 c71b301bf337453b19b591a8a5b9c74b 174 Pfam PF04542 Sigma-70 region 2 20 79 7.8E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_1041 c71b301bf337453b19b591a8a5b9c74b 174 Gene3D G3DSA:1.10.1740.10 1 80 6.4E-11 T 14-10-2018 TMO_1041 c71b301bf337453b19b591a8a5b9c74b 174 SUPERFAMILY SSF88946 9 83 5.49E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_1041 c71b301bf337453b19b591a8a5b9c74b 174 Gene3D G3DSA:1.10.10.10 85 170 1.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0902 fef117e37a3d2383b6edf3dc40318d38 465 Gene3D G3DSA:3.90.1300.10 1 463 1.6E-123 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_0902 fef117e37a3d2383b6edf3dc40318d38 465 Pfam PF01425 Amidase 25 445 4.2E-89 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_0902 fef117e37a3d2383b6edf3dc40318d38 465 SUPERFAMILY SSF75304 3 462 1.57E-121 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_2096 ada78cd0dfb90df41d485e54f8f9e650 381 Pfam PF07969 Amidohydrolase family 81 380 1.3E-10 T 14-10-2018 IPR013108 Amidohydrolase 3 TMO_2096 ada78cd0dfb90df41d485e54f8f9e650 381 SUPERFAMILY SSF51338 1 379 1.03E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2096 ada78cd0dfb90df41d485e54f8f9e650 381 Gene3D G3DSA:2.30.40.10 343 360 5.0E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2096 ada78cd0dfb90df41d485e54f8f9e650 381 Gene3D G3DSA:3.20.20.140 313 342 5.0E-6 T 14-10-2018 TMO_2096 ada78cd0dfb90df41d485e54f8f9e650 381 PIRSF PIRSF038971 3 381 6.3E-140 T 14-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_2096 ada78cd0dfb90df41d485e54f8f9e650 381 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 6 380 3.7E-143 T 14-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_2096 ada78cd0dfb90df41d485e54f8f9e650 381 Gene3D G3DSA:3.20.20.140 55 219 3.8E-12 T 14-10-2018 TMO_2096 ada78cd0dfb90df41d485e54f8f9e650 381 Gene3D G3DSA:2.30.40.10 6 54 3.8E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2096 ada78cd0dfb90df41d485e54f8f9e650 381 SUPERFAMILY SSF51556 55 347 2.85E-17 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_3152 203e323eb285043bbbdd3f4a4e43f184 209 SMART SM00855 5 155 8.1E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_3152 203e323eb285043bbbdd3f4a4e43f184 209 SUPERFAMILY SSF53254 6 193 5.78E-38 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_3152 203e323eb285043bbbdd3f4a4e43f184 209 PIRSF PIRSF000709 37 186 3.4E-10 T 14-10-2018 TMO_3152 203e323eb285043bbbdd3f4a4e43f184 209 Gene3D G3DSA:3.40.50.1240 2 203 7.6E-37 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_3152 203e323eb285043bbbdd3f4a4e43f184 209 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 184 2.1E-37 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 PIRSF PIRSF000724 1 398 1.2E-138 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 17 27 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 1.6E-75 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 351 362 1.6E-75 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 111 126 1.6E-75 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 139 161 1.6E-75 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 33 55 1.6E-75 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 12 28 1.6E-75 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 1.6E-75 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 1.6E-75 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 374 391 1.6E-75 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 Gene3D G3DSA:3.40.50.1260 171 388 1.5E-144 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 SUPERFAMILY SSF53748 5 397 2.94E-142 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 Pfam PF00162 Phosphoglycerate kinase 9 388 1.2E-142 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 7 398 38.054 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_0883 05e763101dc39550e971f7cea7cf855b 398 Gene3D G3DSA:3.40.50.1260 10 396 1.5E-144 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_a0334 55858c7d0d53cd801b1d44bcb44c9613 798 Pfam PF01011 PQQ enzyme repeat 448 473 4.4E-5 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TMO_a0334 55858c7d0d53cd801b1d44bcb44c9613 798 SUPERFAMILY SSF50998 174 790 1.96E-149 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TMO_a0334 55858c7d0d53cd801b1d44bcb44c9613 798 Pfam PF13360 PQQ-like domain 243 398 1.0E-11 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TMO_a0334 55858c7d0d53cd801b1d44bcb44c9613 798 Gene3D G3DSA:2.140.10.10 173 569 2.2E-122 T 14-10-2018 TMO_a0334 55858c7d0d53cd801b1d44bcb44c9613 798 Gene3D G3DSA:2.140.10.10 570 794 3.0E-29 T 14-10-2018 TMO_a0334 55858c7d0d53cd801b1d44bcb44c9613 798 SMART SM00564 415 465 99.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_a0334 55858c7d0d53cd801b1d44bcb44c9613 798 SMART SM00564 712 745 15.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_a0334 55858c7d0d53cd801b1d44bcb44c9613 798 SMART SM00564 289 321 70.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_a0334 55858c7d0d53cd801b1d44bcb44c9613 798 SMART SM00564 346 387 0.092 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_a0334 55858c7d0d53cd801b1d44bcb44c9613 798 SMART SM00564 231 262 0.0026 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_a0334 55858c7d0d53cd801b1d44bcb44c9613 798 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 17 790 0.0 T 14-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 TMO_2984 a5a67966df00210c5e8135c39cb9dd68 133 Gene3D G3DSA:2.60.15.10 1 133 3.9E-33 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2984 a5a67966df00210c5e8135c39cb9dd68 133 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 132 3.4E-30 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2984 a5a67966df00210c5e8135c39cb9dd68 133 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 87 1.0E-21 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2984 a5a67966df00210c5e8135c39cb9dd68 133 SUPERFAMILY SSF51344 5 85 1.7E-21 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2984 a5a67966df00210c5e8135c39cb9dd68 133 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 3.7E-24 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2984 a5a67966df00210c5e8135c39cb9dd68 133 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 18.85 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2471 5fe5fcd219e960f0e49bdd9232bac85f 262 Pfam PF00005 ABC transporter 41 177 3.4E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2471 5fe5fcd219e960f0e49bdd9232bac85f 262 SUPERFAMILY SSF52540 25 230 5.19E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2471 5fe5fcd219e960f0e49bdd9232bac85f 262 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2471 5fe5fcd219e960f0e49bdd9232bac85f 262 Gene3D G3DSA:3.40.50.300 9 227 1.2E-51 T 14-10-2018 TMO_2471 5fe5fcd219e960f0e49bdd9232bac85f 262 SMART SM00382 49 226 1.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 SUPERFAMILY SSF51735 10 254 1.05E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 191 4.0E-5 T 14-10-2018 TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 2.3E-70 T 14-10-2018 TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 Gene3D G3DSA:3.40.50.720 2 256 1.2E-85 T 14-10-2018 TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 6.0E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 6.0E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0642 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 6.0E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2513 b7c2a69a46ed7052914f68c9bf8c8ad7 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 155 1.8E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_2513 b7c2a69a46ed7052914f68c9bf8c8ad7 401 SUPERFAMILY SSF161098 92 212 1.6E-12 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2513 b7c2a69a46ed7052914f68c9bf8c8ad7 401 Gene3D G3DSA:1.10.3720.10 190 397 2.1E-35 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2513 b7c2a69a46ed7052914f68c9bf8c8ad7 401 SUPERFAMILY SSF161098 193 382 4.97E-27 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2513 b7c2a69a46ed7052914f68c9bf8c8ad7 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 232 396 1.6E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 SUPERFAMILY SSF50104 121 177 9.03E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 25.697 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 6.3E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 6.3E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 6.3E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 2.9E-69 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 SMART SM00738 2 111 1.6E-47 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 Pfam PF00467 KOW motif 127 156 2.9E-5 T 14-10-2018 IPR005824 KOW TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 Pfam PF02357 Transcription termination factor nusG 4 107 3.4E-26 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 Gene3D G3DSA:3.30.70.940 2 118 2.3E-44 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 Gene3D G3DSA:2.30.30.30 119 177 2.8E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 SMART SM00739 123 150 1.7E-4 T 14-10-2018 IPR005824 KOW TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 SUPERFAMILY SSF82679 4 113 3.53E-37 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TMO_2645 b0e22ccac6c84a38b6db9768eaf2dc94 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site TMO_a0301 65ac84452b690228b4fa480ab9e43b9d 281 SUPERFAMILY SSF56645 36 162 5.64E-5 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_a0301 65ac84452b690228b4fa480ab9e43b9d 281 Gene3D G3DSA:1.10.540.10 20 105 2.9E-6 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_2445 5713fd7f746855fbbc916ab7b0ba792a 170 Gene3D G3DSA:3.30.70.920 64 147 5.3E-22 T 14-10-2018 TMO_2445 5713fd7f746855fbbc916ab7b0ba792a 170 SUPERFAMILY SSF46785 10 69 2.13E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2445 5713fd7f746855fbbc916ab7b0ba792a 170 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 56 9.9E-16 T 14-10-2018 TMO_2445 5713fd7f746855fbbc916ab7b0ba792a 170 Pfam PF01037 Lrp/AsnC ligand binding domain 76 150 4.7E-21 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_2445 5713fd7f746855fbbc916ab7b0ba792a 170 SUPERFAMILY SSF54909 72 158 7.51E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_2445 5713fd7f746855fbbc916ab7b0ba792a 170 SMART SM00344 10 119 1.4E-40 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_2445 5713fd7f746855fbbc916ab7b0ba792a 170 Gene3D G3DSA:1.10.10.10 4 63 8.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2445 5713fd7f746855fbbc916ab7b0ba792a 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 2.4E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_2445 5713fd7f746855fbbc916ab7b0ba792a 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 2.4E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_2445 5713fd7f746855fbbc916ab7b0ba792a 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 2.4E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_2309 9b3e0684bd917904e3669712b84df38c 339 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 317 8.2E-38 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_2309 9b3e0684bd917904e3669712b84df38c 339 Gene3D G3DSA:3.40.190.170 30 339 6.5E-72 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_1977 93d9dfda550097f82a7b89ac5bec2e3c 185 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 64 172 2.9E-23 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1977 93d9dfda550097f82a7b89ac5bec2e3c 185 Gene3D G3DSA:3.40.50.12280 22 185 2.4E-80 T 14-10-2018 TMO_1977 93d9dfda550097f82a7b89ac5bec2e3c 185 SUPERFAMILY SSF56770 36 180 1.57E-66 T 14-10-2018 TMO_1977 93d9dfda550097f82a7b89ac5bec2e3c 185 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 38 179 2.3E-76 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1977 93d9dfda550097f82a7b89ac5bec2e3c 185 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 145 161 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1977 93d9dfda550097f82a7b89ac5bec2e3c 185 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 178 41.739 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_3200 b285ba97a686e0a6575b33894337d374 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 124 2.2E-9 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_3200 b285ba97a686e0a6575b33894337d374 176 Gene3D G3DSA:2.160.10.10 1 175 1.3E-62 T 14-10-2018 TMO_3200 b285ba97a686e0a6575b33894337d374 176 SUPERFAMILY SSF51161 3 169 1.94E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_b0590 8e9817d61d649412e6b858e5581078d0 148 Gene3D G3DSA:3.10.450.50 8 146 1.3E-41 T 14-10-2018 TMO_b0590 8e9817d61d649412e6b858e5581078d0 148 Pfam PF12680 SnoaL-like domain 21 114 3.3E-9 T 14-10-2018 IPR037401 SnoaL-like domain TMO_b0590 8e9817d61d649412e6b858e5581078d0 148 SUPERFAMILY SSF54427 16 122 2.36E-18 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_c0681 4e970aee7767583c20c52ef1ad54ebf0 155 Pfam PF01047 MarR family 36 93 1.9E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0681 4e970aee7767583c20c52ef1ad54ebf0 155 SMART SM00347 29 129 4.2E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0681 4e970aee7767583c20c52ef1ad54ebf0 155 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_c0681 4e970aee7767583c20c52ef1ad54ebf0 155 SUPERFAMILY SSF46785 10 144 4.93E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0681 4e970aee7767583c20c52ef1ad54ebf0 155 Gene3D G3DSA:1.10.10.10 2 147 1.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0681 4e970aee7767583c20c52ef1ad54ebf0 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 3.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0681 4e970aee7767583c20c52ef1ad54ebf0 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 3.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0681 4e970aee7767583c20c52ef1ad54ebf0 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 3.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1364 be16edfd348d69c8cde576a52b6fdf2f 465 SUPERFAMILY SSF75304 3 454 1.44E-131 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1364 be16edfd348d69c8cde576a52b6fdf2f 465 Pfam PF01425 Amidase 27 446 6.0E-106 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1364 be16edfd348d69c8cde576a52b6fdf2f 465 ProSitePatterns PS00571 Amidases signature. 155 186 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TMO_1364 be16edfd348d69c8cde576a52b6fdf2f 465 Gene3D G3DSA:3.90.1300.10 3 465 1.3E-137 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_a0517 2156d6c5d8102b8fb7aea1c020a74b40 400 Pfam PF00108 Thiolase, N-terminal domain 16 227 6.7E-17 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_a0517 2156d6c5d8102b8fb7aea1c020a74b40 400 SUPERFAMILY SSF53901 266 385 5.76E-23 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0517 2156d6c5d8102b8fb7aea1c020a74b40 400 SUPERFAMILY SSF53901 9 235 3.01E-37 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0517 2156d6c5d8102b8fb7aea1c020a74b40 400 Gene3D G3DSA:3.40.47.10 6 395 1.8E-94 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_a0517 2156d6c5d8102b8fb7aea1c020a74b40 400 Pfam PF02803 Thiolase, C-terminal domain 270 363 1.5E-6 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_a0517 2156d6c5d8102b8fb7aea1c020a74b40 400 PIRSF PIRSF000429 4 396 1.7E-61 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_c0212 9d770b942fda2b36b69882719f288804 205 Pfam PF12833 Helix-turn-helix domain 120 198 1.1E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0212 9d770b942fda2b36b69882719f288804 205 Gene3D G3DSA:1.10.10.60 93 204 4.4E-32 T 14-10-2018 TMO_c0212 9d770b942fda2b36b69882719f288804 205 SUPERFAMILY SSF46689 150 199 7.17E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0212 9d770b942fda2b36b69882719f288804 205 SUPERFAMILY SSF46689 101 148 3.85E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0212 9d770b942fda2b36b69882719f288804 205 SMART SM00342 114 197 1.2E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2053 7a032477ee2350a9a3f09edf77292609 894 SUPERFAMILY SSF90123 18 339 1.96E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_2053 7a032477ee2350a9a3f09edf77292609 894 Gene3D G3DSA:3.40.50.300 355 557 8.9E-20 T 14-10-2018 TMO_2053 7a032477ee2350a9a3f09edf77292609 894 Gene3D G3DSA:1.20.1560.10 16 338 6.2E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_2053 7a032477ee2350a9a3f09edf77292609 894 SUPERFAMILY SSF52540 364 883 2.4E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2053 7a032477ee2350a9a3f09edf77292609 894 Gene3D G3DSA:3.40.50.300 685 894 1.7E-32 T 14-10-2018 TMO_2053 7a032477ee2350a9a3f09edf77292609 894 Pfam PF00005 ABC transporter 378 480 1.5E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2053 7a032477ee2350a9a3f09edf77292609 894 Pfam PF00664 ABC transporter transmembrane region 66 304 2.3E-22 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_2053 7a032477ee2350a9a3f09edf77292609 894 SMART SM00382 387 870 7.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2053 7a032477ee2350a9a3f09edf77292609 894 Pfam PF00005 ABC transporter 740 824 3.1E-6 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 Gene3D G3DSA:1.20.58.100 436 547 2.3E-39 T 14-10-2018 TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 47 56 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 10 596 3.6E-295 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 SUPERFAMILY SSF56425 240 358 2.84E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 Gene3D G3DSA:4.10.80.40 548 596 7.8E-11 T 14-10-2018 TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 PIRSF PIRSF000171 2 586 3.0E-39 T 14-10-2018 TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 Gene3D G3DSA:3.90.700.10 250 353 4.9E-167 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 SUPERFAMILY SSF51905 4 431 7.63E-81 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 Pfam PF00890 FAD binding domain 13 408 4.9E-122 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 13 596 2.0E-248 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 SUPERFAMILY SSF46977 454 596 4.19E-51 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 Gene3D G3DSA:3.50.50.60 13 419 4.9E-167 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3275 e7184d2c8004b55fe8ef97247455fc99 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 9.1E-45 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 SUPERFAMILY SSF47384 542 628 3.92E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 SMART SM00388 558 627 1.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 Pfam PF12860 PAS fold 429 543 7.7E-23 T 14-10-2018 TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 SUPERFAMILY SSF55874 616 783 5.11E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 Gene3D G3DSA:3.30.450.20 409 546 1.6E-11 T 14-10-2018 TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 Gene3D G3DSA:3.30.565.10 629 785 7.6E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 769 782 2.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 745 763 2.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 724 2.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 Pfam PF00512 His Kinase A (phospho-acceptor) domain 558 627 1.8E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 SUPERFAMILY SSF55785 413 511 7.23E-8 T 14-10-2018 IPR035965 PAS domain superfamily TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 Gene3D G3DSA:1.10.287.130 547 628 8.6E-24 T 14-10-2018 TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 Gene3D G3DSA:3.30.450.20 63 219 2.6E-21 T 14-10-2018 TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 673 782 1.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0998 0b0fd3da736b27e698ef2f63bd4369b5 800 SMART SM00387 673 785 7.0E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 SMART SM00091 228 297 9.4 T 14-10-2018 IPR000014 PAS domain TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 SMART SM00091 353 419 1.7E-10 T 14-10-2018 IPR000014 PAS domain TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 PRINTS PR00344 Bacterial sensor protein C-terminal signature 116 130 8.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 686 8.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 704 8.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 Gene3D G3DSA:3.30.450.20 219 352 4.6E-7 T 14-10-2018 TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 Pfam PF12860 PAS fold 234 349 2.9E-6 T 14-10-2018 TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 SUPERFAMILY SSF55785 219 299 1.6E-6 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 Gene3D G3DSA:3.30.565.10 552 704 6.5E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 SUPERFAMILY SSF47384 464 548 2.16E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 Gene3D G3DSA:3.30.450.20 353 472 1.4E-13 T 14-10-2018 TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 SMART SM00388 479 547 3.4E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 SUPERFAMILY SSF55785 347 471 5.48E-12 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 Gene3D G3DSA:1.10.287.130 473 551 2.4E-14 T 14-10-2018 TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 Pfam PF00512 His Kinase A (phospho-acceptor) domain 480 547 1.8E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 357 475 1.9E-6 T 14-10-2018 IPR000014 PAS domain TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 Pfam PF13426 PAS domain 364 472 2.0E-8 T 14-10-2018 IPR000014 PAS domain TMO_1844 a2a88c4f12102407cb57b52a0bcaf8c4 709 SUPERFAMILY SSF55874 537 706 6.59E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2860 a7a33005ba4cf0ffc62a69c32a71879b 458 Gene3D G3DSA:3.40.640.10 61 335 2.9E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_2860 a7a33005ba4cf0ffc62a69c32a71879b 458 PIRSF PIRSF000521 28 397 4.5E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_2860 a7a33005ba4cf0ffc62a69c32a71879b 458 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_2860 a7a33005ba4cf0ffc62a69c32a71879b 458 Gene3D G3DSA:3.90.1150.10 28 445 2.9E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_2860 a7a33005ba4cf0ffc62a69c32a71879b 458 Pfam PF00202 Aminotransferase class-III 29 445 1.2E-98 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_2860 a7a33005ba4cf0ffc62a69c32a71879b 458 SUPERFAMILY SSF53383 14 445 2.31E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 Pfam PF00005 ABC transporter 314 463 3.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 Gene3D G3DSA:3.40.50.300 288 553 1.3E-82 T 14-10-2018 TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 Gene3D G3DSA:3.40.50.300 14 287 1.2E-83 T 14-10-2018 TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 SUPERFAMILY SSF52540 18 267 3.15E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 Pfam PF00005 ABC transporter 36 195 1.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 SMART SM00382 45 245 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 SMART SM00382 322 513 4.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 SUPERFAMILY SSF52540 289 534 2.97E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 515 540 8.7E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_a0023 06eebbc95abf6d6d6455985c6e745dc2 559 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 247 285 1.3E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_3036 182c08f846865670fb358cd6b0ca34a2 122 Pfam PF01042 Endoribonuclease L-PSP 17 119 1.8E-22 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 TMO_3036 182c08f846865670fb358cd6b0ca34a2 122 Gene3D G3DSA:3.30.1330.40 2 121 7.6E-43 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TMO_3036 182c08f846865670fb358cd6b0ca34a2 122 SUPERFAMILY SSF55298 11 121 1.88E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TMO_1617 69fc0a631190ce02077750f80d6fb53f 359 Gene3D G3DSA:3.90.226.40 2 359 4.0E-122 T 14-10-2018 TMO_1617 69fc0a631190ce02077750f80d6fb53f 359 Pfam PF16113 Enoyl-CoA hydratase/isomerase 15 348 3.8E-122 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 TMO_1617 69fc0a631190ce02077750f80d6fb53f 359 SUPERFAMILY SSF52096 3 333 3.09E-61 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0089 a5296b98afb2bdffaed181cff1b85c3a 177 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 11 165 3.9E-60 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 TMO_a0089 a5296b98afb2bdffaed181cff1b85c3a 177 PIRSF PIRSF028301 1 177 1.3E-64 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 TMO_a0089 a5296b98afb2bdffaed181cff1b85c3a 177 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 165 1.9E-58 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 TMO_0392 ced3945e5c3d7854e12ab718407ee898 364 Pfam PF03929 PepSY-associated TM region 15 362 2.5E-44 T 14-10-2018 IPR005625 PepSY-associated TM protein TMO_b0208 8c0aaef4b7315a2f52feeca6d919a867 279 Gene3D G3DSA:2.60.120.10 18 106 6.5E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_b0208 8c0aaef4b7315a2f52feeca6d919a867 279 SMART SM00342 185 267 3.6E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0208 8c0aaef4b7315a2f52feeca6d919a867 279 Pfam PF12833 Helix-turn-helix domain 193 268 1.3E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0208 8c0aaef4b7315a2f52feeca6d919a867 279 Pfam PF02311 AraC-like ligand binding domain 43 123 2.1E-7 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_b0208 8c0aaef4b7315a2f52feeca6d919a867 279 Gene3D G3DSA:1.10.10.60 167 278 1.6E-15 T 14-10-2018 TMO_b0208 8c0aaef4b7315a2f52feeca6d919a867 279 SUPERFAMILY SSF51182 15 193 4.89E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_b0208 8c0aaef4b7315a2f52feeca6d919a867 279 SUPERFAMILY SSF46689 224 269 1.52E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2203 88a4ff61269600a54663ce9749d7037a 212 Gene3D G3DSA:3.40.50.300 1 208 1.9E-51 T 14-10-2018 TMO_2203 88a4ff61269600a54663ce9749d7037a 212 PIRSF PIRSF009320 1 212 2.3E-46 T 14-10-2018 TMO_2203 88a4ff61269600a54663ce9749d7037a 212 SUPERFAMILY SSF52540 2 209 3.82E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2203 88a4ff61269600a54663ce9749d7037a 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 185 9.0E-18 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TMO_c0422 5c540a3ae3680fed8e218b34de9fc821 317 Gene3D G3DSA:3.40.190.10 177 276 7.2E-57 T 14-10-2018 TMO_c0422 5c540a3ae3680fed8e218b34de9fc821 317 Pfam PF03466 LysR substrate binding domain 101 299 6.8E-25 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0422 5c540a3ae3680fed8e218b34de9fc821 317 Gene3D G3DSA:3.40.190.10 96 296 7.2E-57 T 14-10-2018 TMO_c0422 5c540a3ae3680fed8e218b34de9fc821 317 Gene3D G3DSA:1.10.10.10 6 94 3.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0422 5c540a3ae3680fed8e218b34de9fc821 317 SUPERFAMILY SSF53850 96 299 1.4E-40 T 14-10-2018 TMO_c0422 5c540a3ae3680fed8e218b34de9fc821 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 71 1.5E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0422 5c540a3ae3680fed8e218b34de9fc821 317 SUPERFAMILY SSF46785 9 91 3.95E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0363 7816cf1dcb01fc15aacb8ef3f7ab67e2 427 PIRSF PIRSF006066 1 427 1.1E-105 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_c0363 7816cf1dcb01fc15aacb8ef3f7ab67e2 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 2.8E-104 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_c0363 7816cf1dcb01fc15aacb8ef3f7ab67e2 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 414 1.7E-94 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_1726 47dee714270bf1e15118583f35f07b43 231 Pfam PF00005 ABC transporter 17 161 5.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1726 47dee714270bf1e15118583f35f07b43 231 Gene3D G3DSA:3.40.50.300 1 227 2.0E-60 T 14-10-2018 TMO_1726 47dee714270bf1e15118583f35f07b43 231 SMART SM00382 26 217 4.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1726 47dee714270bf1e15118583f35f07b43 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 1.8E-101 T 14-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE TMO_1726 47dee714270bf1e15118583f35f07b43 231 SUPERFAMILY SSF52540 2 223 4.74E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0384 bc417b1c8b8ef2838d73eec72b1610d2 385 Gene3D G3DSA:3.50.50.60 3 331 2.2E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0384 bc417b1c8b8ef2838d73eec72b1610d2 385 Pfam PF01494 FAD binding domain 131 316 1.3E-10 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 TMO_a0384 bc417b1c8b8ef2838d73eec72b1610d2 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 259 274 1.2E-11 T 14-10-2018 TMO_a0384 bc417b1c8b8ef2838d73eec72b1610d2 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 129 144 1.2E-11 T 14-10-2018 TMO_a0384 bc417b1c8b8ef2838d73eec72b1610d2 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 290 1.2E-11 T 14-10-2018 TMO_a0384 bc417b1c8b8ef2838d73eec72b1610d2 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.2E-11 T 14-10-2018 TMO_a0384 bc417b1c8b8ef2838d73eec72b1610d2 385 SUPERFAMILY SSF51905 1 332 9.07E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0384 bc417b1c8b8ef2838d73eec72b1610d2 385 Gene3D G3DSA:3.30.9.20 40 248 2.2E-100 T 14-10-2018 TMO_0319 3257c635176c1f4f86bc322fb21c6abc 182 Pfam PF02592 Putative vitamin uptake transporter 35 163 3.6E-28 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 TMO_0319 3257c635176c1f4f86bc322fb21c6abc 182 Hamap MF_02088 Probable queuosine precursor transporter. 6 178 14.807 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 TMO_c0586 2aaff04a6e52647e6560be5cf28b888f 384 SUPERFAMILY SSF52402 13 257 6.4E-49 T 14-10-2018 TMO_c0586 2aaff04a6e52647e6560be5cf28b888f 384 Gene3D G3DSA:3.40.50.620 7 221 7.1E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_c0586 2aaff04a6e52647e6560be5cf28b888f 384 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 14 373 1.6E-101 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TMO_c0586 2aaff04a6e52647e6560be5cf28b888f 384 Pfam PF03054 tRNA methyl transferase 14 373 4.2E-117 T 14-10-2018 TMO_c0586 2aaff04a6e52647e6560be5cf28b888f 384 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 13 374 40.038 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TMO_c0586 2aaff04a6e52647e6560be5cf28b888f 384 Gene3D G3DSA:2.30.30.280 226 289 1.5E-15 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TMO_c0586 2aaff04a6e52647e6560be5cf28b888f 384 Gene3D G3DSA:2.40.30.10 290 378 5.2E-22 T 14-10-2018 TMO_c0277 6b4633537125a66553183e34d423d6da 426 Gene3D G3DSA:3.50.50.60 116 242 6.9E-99 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0277 6b4633537125a66553183e34d423d6da 426 Gene3D G3DSA:3.30.390.30 330 425 1.1E-26 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_c0277 6b4633537125a66553183e34d423d6da 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.0E-20 T 14-10-2018 TMO_c0277 6b4633537125a66553183e34d423d6da 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 1.0E-20 T 14-10-2018 TMO_c0277 6b4633537125a66553183e34d423d6da 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.0E-20 T 14-10-2018 TMO_c0277 6b4633537125a66553183e34d423d6da 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.0E-20 T 14-10-2018 TMO_c0277 6b4633537125a66553183e34d423d6da 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.0E-20 T 14-10-2018 TMO_c0277 6b4633537125a66553183e34d423d6da 426 SUPERFAMILY SSF55424 322 418 2.88E-26 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_c0277 6b4633537125a66553183e34d423d6da 426 Gene3D G3DSA:3.50.50.60 8 318 6.9E-99 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0277 6b4633537125a66553183e34d423d6da 426 Pfam PF14759 Reductase C-terminal 330 417 4.5E-25 T 14-10-2018 IPR028202 Reductase, C-terminal TMO_c0277 6b4633537125a66553183e34d423d6da 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 8.3E-17 T 14-10-2018 TMO_c0277 6b4633537125a66553183e34d423d6da 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 8.3E-17 T 14-10-2018 TMO_c0277 6b4633537125a66553183e34d423d6da 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 8.3E-17 T 14-10-2018 TMO_c0277 6b4633537125a66553183e34d423d6da 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.3E-17 T 14-10-2018 TMO_c0277 6b4633537125a66553183e34d423d6da 426 SUPERFAMILY SSF51905 147 317 5.67E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0277 6b4633537125a66553183e34d423d6da 426 SUPERFAMILY SSF51905 1 186 2.59E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0277 6b4633537125a66553183e34d423d6da 426 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 310 2.4E-56 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_a0182 2c926234284d44fb005e742b5492dd57 212 SUPERFAMILY SSF48498 91 195 2.87E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_a0182 2c926234284d44fb005e742b5492dd57 212 Gene3D G3DSA:1.10.357.10 8 197 5.2E-49 T 14-10-2018 TMO_a0182 2c926234284d44fb005e742b5492dd57 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0182 2c926234284d44fb005e742b5492dd57 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 1.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0182 2c926234284d44fb005e742b5492dd57 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 2.8E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0182 2c926234284d44fb005e742b5492dd57 212 SUPERFAMILY SSF46689 13 93 2.59E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1669 4d9736656220b2e47c79b856837ece0a 326 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 150 165 - T 14-10-2018 IPR019826 Carboxylesterase type B, active site TMO_1669 4d9736656220b2e47c79b856837ece0a 326 SUPERFAMILY SSF53474 24 323 1.8E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1669 4d9736656220b2e47c79b856837ece0a 326 Gene3D G3DSA:3.40.50.1820 2 325 3.8E-82 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1669 4d9736656220b2e47c79b856837ece0a 326 Pfam PF07859 alpha/beta hydrolase fold 85 297 5.3E-67 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 TMO_1126 2dc9bf4cbc40cda923554caae0eeeefb 359 Pfam PF01312 FlhB HrpN YscU SpaS Family 10 349 4.1E-118 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_1126 2dc9bf4cbc40cda923554caae0eeeefb 359 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 10 355 1.1E-117 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 TMO_1126 2dc9bf4cbc40cda923554caae0eeeefb 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 210 228 4.9E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_1126 2dc9bf4cbc40cda923554caae0eeeefb 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 304 325 4.9E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_1126 2dc9bf4cbc40cda923554caae0eeeefb 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 12 34 4.9E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_1126 2dc9bf4cbc40cda923554caae0eeeefb 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 230 247 4.9E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_1126 2dc9bf4cbc40cda923554caae0eeeefb 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 274 289 4.9E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_1126 2dc9bf4cbc40cda923554caae0eeeefb 359 SUPERFAMILY SSF160544 247 353 2.49E-39 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TMO_1126 2dc9bf4cbc40cda923554caae0eeeefb 359 Gene3D G3DSA:3.40.1690.10 219 358 4.6E-54 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TMO_1681 1c3dd1f096934ddf52fe8affde29fc75 281 Pfam PF12706 Beta-lactamase superfamily domain 63 246 1.2E-36 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_1681 1c3dd1f096934ddf52fe8affde29fc75 281 SMART SM00849 52 245 1.8E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_1681 1c3dd1f096934ddf52fe8affde29fc75 281 Gene3D G3DSA:3.60.15.10 17 275 2.9E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_1681 1c3dd1f096934ddf52fe8affde29fc75 281 SUPERFAMILY SSF56281 20 274 3.93E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 Pfam PF06628 Catalase-related immune-responsive 425 485 4.2E-23 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 Pfam PF00199 Catalase 17 397 4.7E-188 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 Gene3D G3DSA:2.40.180.10 13 494 1.2E-223 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 298 325 3.7E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 30 53 3.7E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 93 111 3.7E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 114 131 3.7E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 330 356 3.7E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 133 151 3.7E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 ProSitePatterns PS00438 Catalase proximal active site signature. 53 69 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 PIRSF PIRSF038928 6 490 4.5E-220 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 SMART SM01060 17 401 7.6E-278 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 SUPERFAMILY SSF56634 13 491 3.93E-210 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0255 cd61e70b4bd3e7898ee0a410e76a316b 494 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 343 351 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TMO_0860 000c767d7bc95ba765857c7d6e209c7e 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 279 1.3E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_3097 232263b18528f409658b8f308a3cace6 157 Gene3D G3DSA:3.30.1130.10 22 141 9.7E-41 T 14-10-2018 TMO_3097 232263b18528f409658b8f308a3cace6 157 SUPERFAMILY SSF55620 28 136 2.82E-25 T 14-10-2018 TMO_3097 232263b18528f409658b8f308a3cace6 157 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 157 66.939 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TMO_3097 232263b18528f409658b8f308a3cace6 157 PIRSF PIRSF027377 10 140 1.6E-50 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TMO_3097 232263b18528f409658b8f308a3cace6 157 Pfam PF14489 QueF-like protein 61 136 1.8E-30 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TMO_3097 232263b18528f409658b8f308a3cace6 157 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 27 135 5.1E-44 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 SUPERFAMILY SSF50621 252 387 4.53E-40 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 SUPERFAMILY SSF51419 22 259 1.15E-52 T 14-10-2018 IPR029066 PLP-binding barrel TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 49 59 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 SMART SM01005 259 385 5.1E-50 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 Pfam PF01168 Alanine racemase, N-terminal domain 22 248 1.5E-47 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 Hamap MF_01201 Alanine racemase. 15 385 28.298 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 Pfam PF00842 Alanine racemase, C-terminal domain 259 382 1.8E-35 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 149 161 1.3E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 313 330 1.3E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 367 380 1.3E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 183 194 1.3E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 292 307 1.3E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 275 290 1.3E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 221 248 1.3E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 44 60 1.3E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 Gene3D G3DSA:3.20.20.10 24 246 1.1E-102 T 14-10-2018 IPR029066 PLP-binding barrel TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 TIGRFAM TIGR00492 alr: alanine racemase 18 382 8.9E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_1874 2ddacc12d2e60ee1f54a5e6a75009be8 408 Gene3D G3DSA:2.40.37.10 23 382 1.1E-102 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TMO_c0850 b5740708ab8ba2342a75076c513bebbb 360 Gene3D G3DSA:3.40.50.10330 78 173 2.4E-7 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 TMO_c0850 b5740708ab8ba2342a75076c513bebbb 360 Pfam PF01513 ATP-NAD kinase 32 233 4.9E-20 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TMO_c0850 b5740708ab8ba2342a75076c513bebbb 360 SUPERFAMILY SSF111331 97 163 3.27E-10 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily TMO_c0850 b5740708ab8ba2342a75076c513bebbb 360 PIRSF PIRSF018567 10 357 8.2E-122 T 14-10-2018 IPR011391 Acetoin catabolism kinase AcoX TMO_a0386 318f6a88e03ec2bb8b193b9ba83f6146 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 70 8.1E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0386 318f6a88e03ec2bb8b193b9ba83f6146 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 1.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0386 318f6a88e03ec2bb8b193b9ba83f6146 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 1.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0386 318f6a88e03ec2bb8b193b9ba83f6146 233 SUPERFAMILY SSF48498 93 205 4.45E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_a0386 318f6a88e03ec2bb8b193b9ba83f6146 233 Gene3D G3DSA:1.10.357.10 4 211 3.8E-53 T 14-10-2018 TMO_a0386 318f6a88e03ec2bb8b193b9ba83f6146 233 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 67 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_a0386 318f6a88e03ec2bb8b193b9ba83f6146 233 SUPERFAMILY SSF46689 12 84 3.84E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 Pfam PF00005 ABC transporter 631 867 3.9E-8 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:3.40.50.300 15 603 1.6E-244 T 14-10-2018 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 13 932 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:3.40.50.300 624 943 1.3E-143 T 14-10-2018 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:1.10.8.280 294 410 1.6E-244 T 14-10-2018 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 ProSitePatterns PS00211 ABC transporters family signature. 837 851 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:1.20.1580.10 699 837 1.3E-143 T 14-10-2018 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:3.30.190.20 139 251 1.6E-244 T 14-10-2018 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 Hamap MF_00205 UvrABC system protein A [uvrA]. 10 947 22.833 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:1.20.1580.10 99 501 1.6E-244 T 14-10-2018 TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 SUPERFAMILY SSF52540 12 578 1.4E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1556 1237a01f622d6f7d9f673ec4d8042b43 963 SUPERFAMILY SSF52540 625 928 4.58E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2028 25c81d63342678d7dae56452fa5025d2 254 Gene3D G3DSA:1.10.10.10 164 247 1.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2028 25c81d63342678d7dae56452fa5025d2 254 Gene3D G3DSA:2.60.120.10 47 163 6.1E-34 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_2028 25c81d63342678d7dae56452fa5025d2 254 SUPERFAMILY SSF46785 164 243 5.6E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2028 25c81d63342678d7dae56452fa5025d2 254 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 4.1E-10 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_2028 25c81d63342678d7dae56452fa5025d2 254 ProSitePatterns PS00042 Crp-type HTH domain signature. 194 217 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 TMO_2028 25c81d63342678d7dae56452fa5025d2 254 SMART SM00419 186 235 4.5E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_2028 25c81d63342678d7dae56452fa5025d2 254 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 208 3.9E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_2028 25c81d63342678d7dae56452fa5025d2 254 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 208 223 3.9E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_2028 25c81d63342678d7dae56452fa5025d2 254 SMART SM00100 32 150 1.0E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_2028 25c81d63342678d7dae56452fa5025d2 254 SUPERFAMILY SSF51206 25 162 1.09E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like TMO_2028 25c81d63342678d7dae56452fa5025d2 254 Pfam PF13545 Crp-like helix-turn-helix domain 167 241 4.9E-20 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_2893 bc93ab139c33552bd34826e45162dc10 149 PRINTS PR01483 Fatty acid synthase signature 26 48 1.3E-6 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 TMO_2893 bc93ab139c33552bd34826e45162dc10 149 PRINTS PR01483 Fatty acid synthase signature 48 69 1.3E-6 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 TMO_2893 bc93ab139c33552bd34826e45162dc10 149 Gene3D G3DSA:3.10.129.10 2 143 2.2E-46 T 14-10-2018 TMO_2893 bc93ab139c33552bd34826e45162dc10 149 Pfam PF01575 MaoC like domain 20 116 2.7E-24 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_2893 bc93ab139c33552bd34826e45162dc10 149 SUPERFAMILY SSF54637 5 142 1.23E-43 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_c0739 37ebed9ced68168594031c44e29def3b 173 Pfam PF02470 MlaD protein 37 114 1.9E-20 T 14-10-2018 IPR003399 Mce/MlaD TMO_c0739 37ebed9ced68168594031c44e29def3b 173 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 145 2.2E-45 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 TMO_1235 a8b67c7ff36a23cfc541ed3aece5e0cc 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_1235 a8b67c7ff36a23cfc541ed3aece5e0cc 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 7.7E-19 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1235 a8b67c7ff36a23cfc541ed3aece5e0cc 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 8.0E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1235 a8b67c7ff36a23cfc541ed3aece5e0cc 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 8.0E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1235 a8b67c7ff36a23cfc541ed3aece5e0cc 202 SUPERFAMILY SSF48498 80 174 5.56E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1235 a8b67c7ff36a23cfc541ed3aece5e0cc 202 SUPERFAMILY SSF46689 3 76 4.44E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1235 a8b67c7ff36a23cfc541ed3aece5e0cc 202 Gene3D G3DSA:1.10.357.10 1 187 2.1E-54 T 14-10-2018 TMO_b0221 6475c855df48a3c9230bc35269d94def 312 Pfam PF01497 Periplasmic binding protein 40 241 6.0E-18 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain TMO_b0221 6475c855df48a3c9230bc35269d94def 312 Gene3D G3DSA:3.40.50.1980 34 123 2.1E-20 T 14-10-2018 TMO_b0221 6475c855df48a3c9230bc35269d94def 312 Gene3D G3DSA:3.40.50.1980 128 301 5.7E-46 T 14-10-2018 TMO_b0221 6475c855df48a3c9230bc35269d94def 312 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 88 103 1.3E-9 T 14-10-2018 TMO_b0221 6475c855df48a3c9230bc35269d94def 312 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 213 231 1.3E-9 T 14-10-2018 TMO_b0221 6475c855df48a3c9230bc35269d94def 312 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 189 204 1.3E-9 T 14-10-2018 TMO_b0221 6475c855df48a3c9230bc35269d94def 312 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 278 291 1.3E-9 T 14-10-2018 TMO_b0221 6475c855df48a3c9230bc35269d94def 312 SUPERFAMILY SSF53807 37 297 1.88E-44 T 14-10-2018 TMO_3438 f98d998c24ac8a9431c36da4910f0e2f 355 Gene3D G3DSA:3.40.50.2000 163 333 1.9E-48 T 14-10-2018 TMO_3438 f98d998c24ac8a9431c36da4910f0e2f 355 Gene3D G3DSA:3.40.50.2000 98 162 1.9E-48 T 14-10-2018 TMO_3438 f98d998c24ac8a9431c36da4910f0e2f 355 SUPERFAMILY SSF53756 16 354 1.49E-60 T 14-10-2018 TMO_3438 f98d998c24ac8a9431c36da4910f0e2f 355 Pfam PF00534 Glycosyl transferases group 1 172 332 2.3E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 SUPERFAMILY SSF48113 17 426 2.21E-146 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 Hamap MF_01961 Catalase-peroxidase [katG]. 6 720 38.723 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 Pfam PF00141 Peroxidase 402 694 3.3E-35 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 Pfam PF00141 Peroxidase 67 393 7.1E-49 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 SUPERFAMILY SSF48113 428 719 2.5E-107 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 25 47 1.9E-48 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 263 286 1.9E-48 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 51 64 1.9E-48 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 66 91 1.9E-48 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 474 500 1.9E-48 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 Gene3D G3DSA:1.10.520.10 429 719 2.9E-138 T 14-10-2018 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 ProSitePatterns PS00436 Peroxidases active site signature. 89 100 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 Gene3D G3DSA:1.10.520.10 21 428 1.9E-210 T 14-10-2018 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 Gene3D G3DSA:1.10.420.20 190 395 1.9E-210 T 14-10-2018 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 Gene3D G3DSA:1.10.420.10 574 695 2.9E-138 T 14-10-2018 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00458 Haem peroxidase superfamily signature 167 179 1.5E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00458 Haem peroxidase superfamily signature 314 329 1.5E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00458 Haem peroxidase superfamily signature 149 166 1.5E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00458 Haem peroxidase superfamily signature 89 103 1.5E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00458 Haem peroxidase superfamily signature 255 270 1.5E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_0566 c75c5dce423e023b10b3f781b1840c8c 720 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 10 720 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TMO_c0676 2978442b49233969b25e99ad705fe356 166 SUPERFAMILY SSF46955 9 118 5.13E-33 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily TMO_c0676 2978442b49233969b25e99ad705fe356 166 Gene3D G3DSA:1.10.1660.10 4 133 1.2E-35 T 14-10-2018 TMO_c0676 2978442b49233969b25e99ad705fe356 166 Pfam PF00376 MerR family regulatory protein 10 47 1.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0676 2978442b49233969b25e99ad705fe356 166 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 10 21 9.4E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0676 2978442b49233969b25e99ad705fe356 166 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 65 9.4E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0676 2978442b49233969b25e99ad705fe356 166 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 21 34 9.4E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0676 2978442b49233969b25e99ad705fe356 166 Pfam PF09278 MerR, DNA binding 53 115 1.2E-20 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding TMO_c0676 2978442b49233969b25e99ad705fe356 166 SMART SM00422 9 78 2.3E-29 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_3312 d16193cc3f742d392e2877eb13508abc 234 Pfam PF02230 Phospholipase/Carboxylesterase 19 227 3.8E-28 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 TMO_3312 d16193cc3f742d392e2877eb13508abc 234 SUPERFAMILY SSF53474 20 232 6.72E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3312 d16193cc3f742d392e2877eb13508abc 234 Gene3D G3DSA:3.40.50.1820 1 229 3.6E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0577 a4a864839c6db91fd0ec83971944f95f 225 Gene3D G3DSA:1.10.10.60 23 91 1.5E-28 T 14-10-2018 TMO_b0577 a4a864839c6db91fd0ec83971944f95f 225 ProSitePatterns PS01081 TetR-type HTH domain signature. 50 80 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_b0577 a4a864839c6db91fd0ec83971944f95f 225 SUPERFAMILY SSF46689 25 96 2.21E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0577 a4a864839c6db91fd0ec83971944f95f 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 84 4.8E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0577 a4a864839c6db91fd0ec83971944f95f 225 SUPERFAMILY SSF48498 105 219 4.32E-22 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_b0577 a4a864839c6db91fd0ec83971944f95f 225 Gene3D G3DSA:1.10.357.10 98 222 1.4E-28 T 14-10-2018 TMO_1933 04a93fce018c8b7378fba0a62fde9e44 643 SUPERFAMILY SSF52540 82 371 1.92E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1933 04a93fce018c8b7378fba0a62fde9e44 643 SMART SM00763 26 383 1.8E-168 T 14-10-2018 IPR013153 PrkA AAA domain TMO_1933 04a93fce018c8b7378fba0a62fde9e44 643 Pfam PF06798 PrkA serine protein kinase C-terminal domain 385 635 7.1E-77 T 14-10-2018 IPR010650 PrkA C-terminal domain TMO_1933 04a93fce018c8b7378fba0a62fde9e44 643 Pfam PF08298 PrkA AAA domain 27 381 4.9E-152 T 14-10-2018 IPR013153 PrkA AAA domain TMO_1933 04a93fce018c8b7378fba0a62fde9e44 643 PIRSF PIRSF000549 5 643 5.0E-232 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 TMO_2554 74581bb1b7bf6e3e69dc69bc3f4aac59 256 Gene3D G3DSA:3.20.20.60 1 256 8.3E-71 T 14-10-2018 TMO_2554 74581bb1b7bf6e3e69dc69bc3f4aac59 256 SUPERFAMILY SSF51621 4 254 4.71E-62 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_2554 74581bb1b7bf6e3e69dc69bc3f4aac59 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 244 1.2E-29 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_b0338 e9d55badd72ced33889154c9a4f5eb4b 109 TIGRFAM TIGR03793 TOMM_pelo: NHLP leader peptide domain 5 79 2.0E-23 T 14-10-2018 IPR022513 Thiazole/oxazole-modified microcins TMO_b0338 e9d55badd72ced33889154c9a4f5eb4b 109 Gene3D G3DSA:3.90.330.10 4 80 2.0E-8 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0338 e9d55badd72ced33889154c9a4f5eb4b 109 Pfam PF02979 Nitrile hydratase, alpha chain 10 61 9.0E-7 T 14-10-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0338 e9d55badd72ced33889154c9a4f5eb4b 109 SUPERFAMILY SSF56209 5 83 4.19E-18 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_0975 e6db6876141f82c2b728c41afc06cc8a 393 ProSitePatterns PS00737 Thiolases signature 2. 332 348 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 TMO_0975 e6db6876141f82c2b728c41afc06cc8a 393 PIRSF PIRSF000429 1 391 2.5E-63 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_0975 e6db6876141f82c2b728c41afc06cc8a 393 Pfam PF02803 Thiolase, C-terminal domain 271 366 1.3E-9 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_0975 e6db6876141f82c2b728c41afc06cc8a 393 SUPERFAMILY SSF53901 263 381 3.42E-28 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0975 e6db6876141f82c2b728c41afc06cc8a 393 Pfam PF00108 Thiolase, N-terminal domain 7 187 6.6E-16 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_0975 e6db6876141f82c2b728c41afc06cc8a 393 Gene3D G3DSA:3.40.47.10 4 392 1.6E-113 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0975 e6db6876141f82c2b728c41afc06cc8a 393 SUPERFAMILY SSF53901 5 235 2.33E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0975 e6db6876141f82c2b728c41afc06cc8a 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 78 96 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 TMO_0212 14b1474e72b88d95df355db6c19ab514 235 Pfam PF01292 Prokaryotic cytochrome b561 20 193 6.2E-20 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 TMO_0212 14b1474e72b88d95df355db6c19ab514 235 Gene3D G3DSA:1.20.950.20 13 180 2.1E-15 T 14-10-2018 TMO_0212 14b1474e72b88d95df355db6c19ab514 235 SUPERFAMILY SSF81342 19 196 1.73E-32 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 TMO_c0525 d6cadbd2f131132cf29f7c13427bf405 203 SUPERFAMILY SSF47616 71 201 2.78E-24 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_c0525 d6cadbd2f131132cf29f7c13427bf405 203 SUPERFAMILY SSF52833 1 78 1.26E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0525 d6cadbd2f131132cf29f7c13427bf405 203 Gene3D G3DSA:3.40.30.10 1 80 1.4E-21 T 14-10-2018 TMO_c0525 d6cadbd2f131132cf29f7c13427bf405 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 3.1E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_c0525 d6cadbd2f131132cf29f7c13427bf405 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 193 1.7E-11 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal TMO_c0525 d6cadbd2f131132cf29f7c13427bf405 203 Gene3D G3DSA:1.20.1050.10 83 202 1.9E-30 T 14-10-2018 TMO_c0185 d582a9cc17f04871c71f2213ce4836d3 797 Gene3D G3DSA:3.40.50.300 304 649 7.6E-110 T 14-10-2018 TMO_c0185 d582a9cc17f04871c71f2213ce4836d3 797 SUPERFAMILY SSF52540 28 658 1.65E-181 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0185 d582a9cc17f04871c71f2213ce4836d3 797 Gene3D G3DSA:1.10.10.160 133 213 4.6E-101 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily TMO_c0185 d582a9cc17f04871c71f2213ce4836d3 797 Pfam PF13361 UvrD-like helicase C-terminal domain 301 459 9.5E-31 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TMO_c0185 d582a9cc17f04871c71f2213ce4836d3 797 Gene3D G3DSA:3.40.50.300 32 297 4.6E-101 T 14-10-2018 TMO_c0185 d582a9cc17f04871c71f2213ce4836d3 797 Gene3D G3DSA:1.10.486.10 406 561 7.6E-110 T 14-10-2018 TMO_c0185 d582a9cc17f04871c71f2213ce4836d3 797 Pfam PF13361 UvrD-like helicase C-terminal domain 519 631 1.8E-27 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TMO_c0185 d582a9cc17f04871c71f2213ce4836d3 797 Pfam PF00580 UvrD/REP helicase N-terminal domain 32 296 4.3E-76 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TMO_2271 ad31e74915d2b7c0a805369a834d35db 470 Pfam PF01979 Amidohydrolase family 56 420 7.9E-30 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_2271 ad31e74915d2b7c0a805369a834d35db 470 SUPERFAMILY SSF51556 59 373 1.97E-64 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_2271 ad31e74915d2b7c0a805369a834d35db 470 SUPERFAMILY SSF51338 330 450 1.3E-30 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2271 ad31e74915d2b7c0a805369a834d35db 470 Gene3D G3DSA:2.30.40.10 16 427 3.4E-110 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2271 ad31e74915d2b7c0a805369a834d35db 470 SUPERFAMILY SSF51338 7 73 1.61E-17 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2271 ad31e74915d2b7c0a805369a834d35db 470 Gene3D G3DSA:3.20.20.140 61 432 3.4E-110 T 14-10-2018 TMO_0154 ba0b1c7b8759fba080ccd7c08548bb10 390 Pfam PF02803 Thiolase, C-terminal domain 269 390 3.6E-51 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_0154 ba0b1c7b8759fba080ccd7c08548bb10 390 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 TMO_0154 ba0b1c7b8759fba080ccd7c08548bb10 390 SUPERFAMILY SSF53901 3 267 1.27E-86 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0154 ba0b1c7b8759fba080ccd7c08548bb10 390 Gene3D G3DSA:3.40.47.10 126 388 6.6E-158 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0154 ba0b1c7b8759fba080ccd7c08548bb10 390 SUPERFAMILY SSF53901 269 390 7.79E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0154 ba0b1c7b8759fba080ccd7c08548bb10 390 Gene3D G3DSA:3.40.47.10 5 274 6.6E-158 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0154 ba0b1c7b8759fba080ccd7c08548bb10 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.9E-146 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_0154 ba0b1c7b8759fba080ccd7c08548bb10 390 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 TMO_0154 ba0b1c7b8759fba080ccd7c08548bb10 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 TMO_0154 ba0b1c7b8759fba080ccd7c08548bb10 390 PIRSF PIRSF000429 1 390 1.2E-128 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_0154 ba0b1c7b8759fba080ccd7c08548bb10 390 Pfam PF00108 Thiolase, N-terminal domain 5 260 1.8E-104 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 Gene3D G3DSA:3.40.50.720 2 257 3.4E-83 T 14-10-2018 TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 6.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 6.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 6.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 255 7.0E-70 T 14-10-2018 TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 SUPERFAMILY SSF51735 6 256 1.74E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0290 ecf13ae2fb07d3f7fec3f4e429968122 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0686 03b99d9e7043fbfbcfaf98e2c8eaa082 153 Gene3D G3DSA:3.40.30.10 3 152 1.3E-51 T 14-10-2018 TMO_c0686 03b99d9e7043fbfbcfaf98e2c8eaa082 153 PIRSF PIRSF000239 1 147 2.3E-26 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_c0686 03b99d9e7043fbfbcfaf98e2c8eaa082 153 SUPERFAMILY SSF52833 1 153 1.98E-55 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0686 03b99d9e7043fbfbcfaf98e2c8eaa082 153 Pfam PF00578 AhpC/TSA family 5 132 7.3E-40 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_c0649 cd968d2bfe79e5ebe256db64bab99409 470 Gene3D G3DSA:3.20.20.70 23 374 1.3E-48 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_c0649 cd968d2bfe79e5ebe256db64bab99409 470 Pfam PF00682 HMGL-like 31 320 4.9E-27 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_c0649 cd968d2bfe79e5ebe256db64bab99409 470 SUPERFAMILY SSF51569 27 342 8.61E-36 T 14-10-2018 TMO_3285 6ae31792a63c0e382cf17df44a92ae15 268 Pfam PF01168 Alanine racemase, N-terminal domain 31 254 2.1E-22 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_3285 6ae31792a63c0e382cf17df44a92ae15 268 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 30 253 29.205 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TMO_3285 6ae31792a63c0e382cf17df44a92ae15 268 Gene3D G3DSA:3.20.20.10 6 264 2.8E-85 T 14-10-2018 IPR029066 PLP-binding barrel TMO_3285 6ae31792a63c0e382cf17df44a92ae15 268 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 27 254 2.0E-58 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TMO_3285 6ae31792a63c0e382cf17df44a92ae15 268 SUPERFAMILY SSF51419 22 252 1.01E-74 T 14-10-2018 IPR029066 PLP-binding barrel TMO_3285 6ae31792a63c0e382cf17df44a92ae15 268 PIRSF PIRSF004848 20 260 1.6E-69 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TMO_3459 f7a70534f1c0dd477014d498fe5ac7d5 370 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 112 9.7E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_3459 f7a70534f1c0dd477014d498fe5ac7d5 370 SUPERFAMILY SSF51735 160 335 5.22E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3459 f7a70534f1c0dd477014d498fe5ac7d5 370 SUPERFAMILY SSF50129 320 370 4.05E-12 T 14-10-2018 IPR011032 GroES-like superfamily TMO_3459 f7a70534f1c0dd477014d498fe5ac7d5 370 Gene3D G3DSA:3.40.50.720 174 313 3.5E-146 T 14-10-2018 TMO_3459 f7a70534f1c0dd477014d498fe5ac7d5 370 Gene3D G3DSA:3.90.180.10 6 365 3.5E-146 T 14-10-2018 TMO_3459 f7a70534f1c0dd477014d498fe5ac7d5 370 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 TMO_3459 f7a70534f1c0dd477014d498fe5ac7d5 370 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 370 2.9E-192 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 TMO_3459 f7a70534f1c0dd477014d498fe5ac7d5 370 Pfam PF00107 Zinc-binding dehydrogenase 197 321 1.5E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_3459 f7a70534f1c0dd477014d498fe5ac7d5 370 SUPERFAMILY SSF50129 1 185 1.11E-69 T 14-10-2018 IPR011032 GroES-like superfamily TMO_3459 f7a70534f1c0dd477014d498fe5ac7d5 370 SMART SM00829 12 368 1.4E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_a0125 a312ce0d6a8eb0a2107f7eab2449d916 234 Pfam PF04405 Domain of Unknown function (DUF542) 15 67 3.6E-21 T 14-10-2018 IPR019903 Repair of iron centres family TMO_a0125 a312ce0d6a8eb0a2107f7eab2449d916 234 Pfam PF01814 Hemerythrin HHE cation binding domain 90 229 1.7E-24 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TMO_a0125 a312ce0d6a8eb0a2107f7eab2449d916 234 Gene3D G3DSA:1.20.120.520 87 233 5.2E-29 T 14-10-2018 TMO_a0125 a312ce0d6a8eb0a2107f7eab2449d916 234 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 17 230 2.1E-65 T 14-10-2018 IPR019903 Repair of iron centres family TMO_b0035 53df5f63c67bba385900feac011db6f8 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 3.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0035 53df5f63c67bba385900feac011db6f8 197 SUPERFAMILY SSF48498 86 189 2.34E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_b0035 53df5f63c67bba385900feac011db6f8 197 SUPERFAMILY SSF46689 8 74 1.65E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0035 53df5f63c67bba385900feac011db6f8 197 Gene3D G3DSA:1.10.357.10 5 190 6.3E-31 T 14-10-2018 TMO_2626 83a5b98933c22e71a5b1786ddc98943e 225 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 5.9E-40 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2626 83a5b98933c22e71a5b1786ddc98943e 225 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2626 83a5b98933c22e71a5b1786ddc98943e 225 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 39.061 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TMO_2626 83a5b98933c22e71a5b1786ddc98943e 225 SUPERFAMILY SSF54814 2 105 6.8E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TMO_2626 83a5b98933c22e71a5b1786ddc98943e 225 Gene3D G3DSA:3.30.300.20 17 106 8.8E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_2626 83a5b98933c22e71a5b1786ddc98943e 225 Pfam PF07650 KH domain 38 110 1.1E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2626 83a5b98933c22e71a5b1786ddc98943e 225 Gene3D G3DSA:3.30.1140.32 107 207 1.3E-45 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2626 83a5b98933c22e71a5b1786ddc98943e 225 SMART SM00322 59 124 9.9E-6 T 14-10-2018 IPR004087 K Homology domain GO:0003676 TMO_2626 83a5b98933c22e71a5b1786ddc98943e 225 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 8.7E-93 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TMO_2626 83a5b98933c22e71a5b1786ddc98943e 225 SUPERFAMILY SSF54821 107 205 1.18E-41 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 Gene3D G3DSA:2.130.10.10 832 932 3.2E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF50969 798 1168 3.34E-19 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR01607 Apyrase family signature 490 513 2.7E-6 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR01607 Apyrase family signature 1 13 2.7E-6 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR01607 Apyrase family signature 274 297 2.7E-6 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR01607 Apyrase family signature 322 342 2.7E-6 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR01607 Apyrase family signature 579 598 2.7E-6 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 Gene3D G3DSA:2.150.10.10 1241 1375 4.5E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1189 1249 1.1E-6 T 14-10-2018 IPR010221 VCBS repeat TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF55816 406 609 1.57E-32 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF51120 1236 1322 8.02E-5 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 Pfam PF02872 5'-nucleotidase, C-terminal domain 407 603 1.1E-25 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1408 1426 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 Gene3D G3DSA:2.150.10.10 1376 1424 5.4E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF56300 1 354 2.36E-41 T 14-10-2018 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1399 1417 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF63829 724 827 4.77E-5 T 14-10-2018 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 Gene3D G3DSA:2.150.10.10 1425 1538 1.2E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 ProSitePatterns PS00786 5'-nucleotidase signature 2. 103 114 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR00313 NodO calcium binding signature 1460 1469 7.9E-9 T 14-10-2018 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR00313 NodO calcium binding signature 1439 1447 7.9E-9 T 14-10-2018 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR00313 NodO calcium binding signature 1409 1420 7.9E-9 T 14-10-2018 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR00313 NodO calcium binding signature 1421 1429 7.9E-9 T 14-10-2018 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 Gene3D G3DSA:3.90.780.10 405 624 7.7E-52 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 Gene3D G3DSA:2.130.10.10 668 831 3.2E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TMO_1062 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF51120 1371 1503 1.03E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_2454 0eadad212d383cd5401cacef67963eb6 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 2.9E-12 T 14-10-2018 TMO_2454 0eadad212d383cd5401cacef67963eb6 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 2.9E-12 T 14-10-2018 TMO_2454 0eadad212d383cd5401cacef67963eb6 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 2.9E-12 T 14-10-2018 TMO_2454 0eadad212d383cd5401cacef67963eb6 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 2.9E-12 T 14-10-2018 TMO_2454 0eadad212d383cd5401cacef67963eb6 397 SUPERFAMILY SSF51905 2 378 7.25E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2454 0eadad212d383cd5401cacef67963eb6 397 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 387 5.6E-102 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 TMO_2454 0eadad212d383cd5401cacef67963eb6 397 Pfam PF01494 FAD binding domain 3 318 2.7E-18 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 TMO_2454 0eadad212d383cd5401cacef67963eb6 397 Gene3D G3DSA:3.50.50.60 4 334 4.6E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2454 0eadad212d383cd5401cacef67963eb6 397 Gene3D G3DSA:3.30.9.50 78 267 4.6E-80 T 14-10-2018 TMO_0748 05661c78963d28a7514b30ddc4cec45b 528 SMART SM00487 21 224 1.2E-60 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_0748 05661c78963d28a7514b30ddc4cec45b 528 SMART SM00490 260 341 1.1E-31 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_0748 05661c78963d28a7514b30ddc4cec45b 528 SUPERFAMILY SSF52540 77 362 3.34E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0748 05661c78963d28a7514b30ddc4cec45b 528 Pfam PF00270 DEAD/DEAH box helicase 26 195 1.6E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_0748 05661c78963d28a7514b30ddc4cec45b 528 Gene3D G3DSA:3.40.50.300 1 212 1.7E-77 T 14-10-2018 TMO_0748 05661c78963d28a7514b30ddc4cec45b 528 Pfam PF00271 Helicase conserved C-terminal domain 235 341 1.0E-26 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_0748 05661c78963d28a7514b30ddc4cec45b 528 SUPERFAMILY SSF52540 24 102 5.04E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0748 05661c78963d28a7514b30ddc4cec45b 528 Gene3D G3DSA:3.40.50.300 216 393 5.1E-49 T 14-10-2018 TMO_2575 65f46f250b5d1d1eff99237c0f124855 535 Gene3D G3DSA:3.90.226.10 274 535 4.6E-104 T 14-10-2018 TMO_2575 65f46f250b5d1d1eff99237c0f124855 535 Pfam PF01039 Carboxyl transferase domain 48 525 1.2E-152 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 TMO_2575 65f46f250b5d1d1eff99237c0f124855 535 SUPERFAMILY SSF52096 22 269 3.27E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_2575 65f46f250b5d1d1eff99237c0f124855 535 SUPERFAMILY SSF52096 276 535 1.97E-87 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_2575 65f46f250b5d1d1eff99237c0f124855 535 Gene3D G3DSA:3.90.226.10 1 272 1.2E-99 T 14-10-2018 TMO_a0395 a72b813b7df0c75ee340639f4a29861e 213 SUPERFAMILY SSF48498 100 202 8.26E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_a0395 a72b813b7df0c75ee340639f4a29861e 213 Gene3D G3DSA:1.10.10.60 6 75 4.4E-15 T 14-10-2018 TMO_a0395 a72b813b7df0c75ee340639f4a29861e 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 2.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0395 a72b813b7df0c75ee340639f4a29861e 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 2.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0395 a72b813b7df0c75ee340639f4a29861e 213 SUPERFAMILY SSF46689 21 95 1.49E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0395 a72b813b7df0c75ee340639f4a29861e 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 81 5.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0395 a72b813b7df0c75ee340639f4a29861e 213 Gene3D G3DSA:1.10.357.10 76 208 2.8E-18 T 14-10-2018 TMO_c0847 ace542171cdecdf9b1fb17f77093eeca 133 PRINTS PR00604 Class IA and IB cytochrome C signature 73 83 1.7E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0847 ace542171cdecdf9b1fb17f77093eeca 133 PRINTS PR00604 Class IA and IB cytochrome C signature 106 116 1.7E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0847 ace542171cdecdf9b1fb17f77093eeca 133 PRINTS PR00604 Class IA and IB cytochrome C signature 87 103 1.7E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0847 ace542171cdecdf9b1fb17f77093eeca 133 PRINTS PR00604 Class IA and IB cytochrome C signature 57 72 1.7E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0847 ace542171cdecdf9b1fb17f77093eeca 133 PRINTS PR00604 Class IA and IB cytochrome C signature 44 51 1.7E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0847 ace542171cdecdf9b1fb17f77093eeca 133 PRINTS PR00604 Class IA and IB cytochrome C signature 123 131 1.7E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0847 ace542171cdecdf9b1fb17f77093eeca 133 Pfam PF00034 Cytochrome c 35 133 2.6E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0847 ace542171cdecdf9b1fb17f77093eeca 133 Gene3D G3DSA:1.10.760.10 20 132 4.4E-47 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0847 ace542171cdecdf9b1fb17f77093eeca 133 SUPERFAMILY SSF46626 32 133 1.76E-36 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_b0256 0f566f8bf631a3ecdc31f0d65af6c0e0 141 Gene3D G3DSA:3.30.300.20 7 134 6.0E-27 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_b0256 0f566f8bf631a3ecdc31f0d65af6c0e0 141 Pfam PF02566 OsmC-like protein 34 127 3.3E-13 T 14-10-2018 IPR003718 OsmC/Ohr family TMO_b0256 0f566f8bf631a3ecdc31f0d65af6c0e0 141 SUPERFAMILY SSF82784 6 130 8.24E-29 T 14-10-2018 IPR036102 OsmC/Ohr superfamily TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 107 130 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 237 256 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 471 492 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 334 349 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 379 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 57 82 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 421 440 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 208 226 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 134 158 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 188 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 309 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 393 411 2.0E-91 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 SUPERFAMILY SSF81442 53 570 2.49E-176 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 66 514 1.2E-135 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 290 344 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 Gene3D G3DSA:1.20.210.10 62 562 6.7E-186 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0624 814bbfd3b79d2a3bbf83cbe87e5a3469 667 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 12 656 0.0 T 14-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 TMO_b0449 2130c74d30242ad6cd9922caca8f9a7c 234 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 41 57 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site TMO_b0449 2130c74d30242ad6cd9922caca8f9a7c 234 SMART SM00419 166 213 0.0017 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_b0449 2130c74d30242ad6cd9922caca8f9a7c 234 Gene3D G3DSA:2.60.120.10 6 135 1.0E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_b0449 2130c74d30242ad6cd9922caca8f9a7c 234 Gene3D G3DSA:1.10.10.10 136 229 2.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0449 2130c74d30242ad6cd9922caca8f9a7c 234 SMART SM00100 14 131 4.3E-6 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_b0449 2130c74d30242ad6cd9922caca8f9a7c 234 SUPERFAMILY SSF51206 10 140 3.14E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like TMO_b0449 2130c74d30242ad6cd9922caca8f9a7c 234 Pfam PF00027 Cyclic nucleotide-binding domain 33 119 6.8E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_b0449 2130c74d30242ad6cd9922caca8f9a7c 234 Pfam PF13545 Crp-like helix-turn-helix domain 151 218 7.9E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_b0449 2130c74d30242ad6cd9922caca8f9a7c 234 SUPERFAMILY SSF46785 150 220 7.26E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3105 2b833479626097a0cddd748a53a04c5b 404 Pfam PF00764 Arginosuccinate synthase 9 395 1.8E-159 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TMO_3105 2b833479626097a0cddd748a53a04c5b 404 SUPERFAMILY SSF52402 6 170 3.09E-49 T 14-10-2018 TMO_3105 2b833479626097a0cddd748a53a04c5b 404 Gene3D G3DSA:3.90.1260.10 179 403 1.8E-102 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TMO_3105 2b833479626097a0cddd748a53a04c5b 404 Gene3D G3DSA:3.40.50.620 6 175 5.1E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_3105 2b833479626097a0cddd748a53a04c5b 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TMO_3105 2b833479626097a0cddd748a53a04c5b 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TMO_3105 2b833479626097a0cddd748a53a04c5b 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 395 3.0E-146 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TMO_3105 2b833479626097a0cddd748a53a04c5b 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 402 54.434 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TMO_3105 2b833479626097a0cddd748a53a04c5b 404 SUPERFAMILY SSF69864 176 400 2.35E-94 T 14-10-2018 TMO_0807 d81bd15fa2a1e7ae13c97f893459b6e2 502 Pfam PF13384 Homeodomain-like domain 15 40 8.2E-6 T 14-10-2018 TMO_0807 d81bd15fa2a1e7ae13c97f893459b6e2 502 Pfam PF00665 Integrase core domain 127 252 8.7E-13 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TMO_0807 d81bd15fa2a1e7ae13c97f893459b6e2 502 Gene3D G3DSA:1.10.10.60 3 47 3.2E-5 T 14-10-2018 TMO_0807 d81bd15fa2a1e7ae13c97f893459b6e2 502 SUPERFAMILY SSF46689 8 78 7.7E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0001 d81bd15fa2a1e7ae13c97f893459b6e2 502 Pfam PF13384 Homeodomain-like domain 15 40 8.2E-6 T 14-10-2018 TMO_c0001 d81bd15fa2a1e7ae13c97f893459b6e2 502 Pfam PF00665 Integrase core domain 127 252 8.7E-13 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TMO_c0001 d81bd15fa2a1e7ae13c97f893459b6e2 502 Gene3D G3DSA:1.10.10.60 3 47 3.2E-5 T 14-10-2018 TMO_c0001 d81bd15fa2a1e7ae13c97f893459b6e2 502 SUPERFAMILY SSF46689 8 78 7.7E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1286 40100071ebf56ec42d23d28072aad1b6 644 SUPERFAMILY SSF56801 36 575 6.41E-122 T 14-10-2018 TMO_1286 40100071ebf56ec42d23d28072aad1b6 644 Pfam PF00501 AMP-binding enzyme 49 478 2.3E-71 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_1286 40100071ebf56ec42d23d28072aad1b6 644 ProSitePatterns PS00455 Putative AMP-binding domain signature. 223 234 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_1286 40100071ebf56ec42d23d28072aad1b6 644 Gene3D G3DSA:3.40.50.12780 41 473 8.8E-86 T 14-10-2018 TMO_1286 40100071ebf56ec42d23d28072aad1b6 644 Pfam PF13193 AMP-binding enzyme C-terminal domain 488 563 1.9E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_1286 40100071ebf56ec42d23d28072aad1b6 644 Gene3D G3DSA:3.30.300.30 474 580 4.9E-26 T 14-10-2018 TMO_2125 0f6248ef14adcb149329d91909455b5e 785 PIRSF PIRSF001227 47 784 4.9E-106 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 TMO_2125 0f6248ef14adcb149329d91909455b5e 785 SUPERFAMILY SSF56235 61 783 5.66E-134 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_2125 0f6248ef14adcb149329d91909455b5e 785 Gene3D G3DSA:3.60.20.10 266 759 4.6E-108 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_2125 0f6248ef14adcb149329d91909455b5e 785 Pfam PF01804 Penicillin amidase 64 772 2.2E-141 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 TMO_2125 0f6248ef14adcb149329d91909455b5e 785 Gene3D G3DSA:1.10.1400.10 550 668 4.6E-108 T 14-10-2018 TMO_2125 0f6248ef14adcb149329d91909455b5e 785 Gene3D G3DSA:1.10.439.10 47 200 1.6E-35 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 TMO_2125 0f6248ef14adcb149329d91909455b5e 785 Gene3D G3DSA:2.30.120.10 338 399 4.6E-108 T 14-10-2018 TMO_b0128 ea3e7fe4bffaf09788d841fd0b3135c0 396 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 364 371 3.6E-7 T 14-10-2018 TMO_b0128 ea3e7fe4bffaf09788d841fd0b3135c0 396 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 3.6E-7 T 14-10-2018 TMO_b0128 ea3e7fe4bffaf09788d841fd0b3135c0 396 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.6E-7 T 14-10-2018 TMO_b0128 ea3e7fe4bffaf09788d841fd0b3135c0 396 Gene3D G3DSA:3.50.50.60 8 393 1.1E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0128 ea3e7fe4bffaf09788d841fd0b3135c0 396 SUPERFAMILY SSF160996 193 340 4.97E-39 T 14-10-2018 TMO_b0128 ea3e7fe4bffaf09788d841fd0b3135c0 396 SUPERFAMILY SSF51905 6 396 6.05E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0128 ea3e7fe4bffaf09788d841fd0b3135c0 396 Gene3D G3DSA:2.40.30.10 191 341 1.1E-126 T 14-10-2018 TMO_b0128 ea3e7fe4bffaf09788d841fd0b3135c0 396 Gene3D G3DSA:1.10.8.260 264 324 1.1E-126 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily TMO_b0128 ea3e7fe4bffaf09788d841fd0b3135c0 396 Pfam PF03486 HI0933-like protein 7 394 3.2E-143 T 14-10-2018 TMO_b0128 ea3e7fe4bffaf09788d841fd0b3135c0 396 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 394 5.3E-121 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 SMART SM00382 344 538 6.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 SMART SM00382 53 252 5.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 ProSitePatterns PS00211 ABC transporters family signature. 462 476 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 ProSitePatterns PS00211 ABC transporters family signature. 175 189 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 541 571 1.1E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 254 301 5.7E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 SUPERFAMILY SSF52540 24 274 2.93E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 Pfam PF00005 ABC transporter 45 202 1.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 SUPERFAMILY SSF52540 319 560 5.54E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 Pfam PF00005 ABC transporter 336 490 3.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 Gene3D G3DSA:3.40.50.300 318 573 2.0E-81 T 14-10-2018 TMO_c0349 b426e823b7e76b362dda03bcf05ac089 573 Gene3D G3DSA:3.40.50.300 22 317 3.6E-83 T 14-10-2018 TMO_b0188 478cebbb41a6564a25b10b8cfdf49aaf 555 Gene3D G3DSA:3.40.50.12780 6 433 1.0E-86 T 14-10-2018 TMO_b0188 478cebbb41a6564a25b10b8cfdf49aaf 555 Gene3D G3DSA:3.30.300.30 434 532 9.2E-25 T 14-10-2018 TMO_b0188 478cebbb41a6564a25b10b8cfdf49aaf 555 SUPERFAMILY SSF56801 12 532 1.57E-123 T 14-10-2018 TMO_b0188 478cebbb41a6564a25b10b8cfdf49aaf 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 447 522 1.4E-13 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0188 478cebbb41a6564a25b10b8cfdf49aaf 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0188 478cebbb41a6564a25b10b8cfdf49aaf 555 Pfam PF00501 AMP-binding enzyme 20 438 1.2E-78 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_2966 e5d9da4f38705b08649bab285ad01d32 86 Gene3D G3DSA:2.40.50.100 20 85 6.3E-32 T 14-10-2018 TMO_2966 e5d9da4f38705b08649bab285ad01d32 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2966 e5d9da4f38705b08649bab285ad01d32 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 2.6E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2966 e5d9da4f38705b08649bab285ad01d32 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 28.197 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2966 e5d9da4f38705b08649bab285ad01d32 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 8.4E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2966 e5d9da4f38705b08649bab285ad01d32 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 8.4E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2966 e5d9da4f38705b08649bab285ad01d32 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 8.4E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2966 e5d9da4f38705b08649bab285ad01d32 86 SUPERFAMILY SSF110324 2 82 4.53E-35 T 14-10-2018 TMO_2966 e5d9da4f38705b08649bab285ad01d32 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 83 4.0E-15 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2966 e5d9da4f38705b08649bab285ad01d32 86 Pfam PF01016 Ribosomal L27 protein 2 81 2.4E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0737 d35ac2c233ecc9f278c83e01212f5b6f 167 Gene3D G3DSA:1.10.10.10 3 164 4.3E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0737 d35ac2c233ecc9f278c83e01212f5b6f 167 SUPERFAMILY SSF46785 12 164 4.27E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0737 d35ac2c233ecc9f278c83e01212f5b6f 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 109 125 6.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0737 d35ac2c233ecc9f278c83e01212f5b6f 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 105 6.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0737 d35ac2c233ecc9f278c83e01212f5b6f 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 139 159 6.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0737 d35ac2c233ecc9f278c83e01212f5b6f 167 Pfam PF01047 MarR family 55 114 6.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0737 d35ac2c233ecc9f278c83e01212f5b6f 167 SMART SM00347 46 149 7.5E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0737 d35ac2c233ecc9f278c83e01212f5b6f 167 ProSitePatterns PS01117 MarR-type HTH domain signature. 88 122 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_1652 9221f7fb29c41ad4665b01b13d0fa551 106 Pfam PF12966 N-ATPase, AtpR subunit 13 92 1.3E-11 T 14-10-2018 IPR017581 N-ATPase, AtpR subunit-like TMO_1992 8d9a381c899fcba2bd7679910a4118f2 112 PIRSF PIRSF039144 1 112 1.3E-56 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_1992 8d9a381c899fcba2bd7679910a4118f2 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 TMO_1992 8d9a381c899fcba2bd7679910a4118f2 112 SUPERFAMILY SSF54913 1 112 1.5E-48 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TMO_1992 8d9a381c899fcba2bd7679910a4118f2 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.9E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_1992 8d9a381c899fcba2bd7679910a4118f2 112 PRINTS PR00340 P-II protein signature 52 75 8.1E-46 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_1992 8d9a381c899fcba2bd7679910a4118f2 112 PRINTS PR00340 P-II protein signature 83 103 8.1E-46 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_1992 8d9a381c899fcba2bd7679910a4118f2 112 PRINTS PR00340 P-II protein signature 2 17 8.1E-46 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_1992 8d9a381c899fcba2bd7679910a4118f2 112 PRINTS PR00340 P-II protein signature 23 41 8.1E-46 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_1992 8d9a381c899fcba2bd7679910a4118f2 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 TMO_1992 8d9a381c899fcba2bd7679910a4118f2 112 Gene3D G3DSA:3.30.70.120 1 112 3.1E-51 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TMO_1992 8d9a381c899fcba2bd7679910a4118f2 112 SMART SM00938 4 105 9.5E-71 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_3015 2278b403cf09732a3d4480a8a4bebbef 329 SMART SM00382 43 235 2.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3015 2278b403cf09732a3d4480a8a4bebbef 329 Pfam PF00005 ABC transporter 34 185 4.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3015 2278b403cf09732a3d4480a8a4bebbef 329 SUPERFAMILY SSF52540 20 257 9.54E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3015 2278b403cf09732a3d4480a8a4bebbef 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 302 2.6E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_3015 2278b403cf09732a3d4480a8a4bebbef 329 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3015 2278b403cf09732a3d4480a8a4bebbef 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 320 9.5E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_3015 2278b403cf09732a3d4480a8a4bebbef 329 Gene3D G3DSA:3.40.50.300 7 328 3.8E-99 T 14-10-2018 TMO_0755 5ce0b8aaf4ad9858650a291b36b949e6 300 SUPERFAMILY SSF103481 48 145 9.55E-9 T 14-10-2018 TMO_0755 5ce0b8aaf4ad9858650a291b36b949e6 300 SUPERFAMILY SSF103481 203 299 5.36E-9 T 14-10-2018 TMO_0755 5ce0b8aaf4ad9858650a291b36b949e6 300 Pfam PF00892 EamA-like transporter family 159 298 1.2E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_2272 8532ea1c6907794d70c09736963364a4 392 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 11 391 5.5E-111 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 TMO_2272 8532ea1c6907794d70c09736963364a4 392 Gene3D G3DSA:3.40.640.10 6 261 1.0E-71 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_2272 8532ea1c6907794d70c09736963364a4 392 PIRSF PIRSF001434 1 392 3.7E-111 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_2272 8532ea1c6907794d70c09736963364a4 392 SUPERFAMILY SSF53383 40 389 1.35E-86 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_2272 8532ea1c6907794d70c09736963364a4 392 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 205 219 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_2272 8532ea1c6907794d70c09736963364a4 392 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 388 1.2E-92 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_2272 8532ea1c6907794d70c09736963364a4 392 Gene3D G3DSA:3.90.1150.10 262 392 3.4E-33 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:3.30.56.10 5 181 1.7E-66 T 14-10-2018 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 SUPERFAMILY SSF50249 36 196 2.35E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 SUPERFAMILY SSF56037 202 399 2.88E-64 T 14-10-2018 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:3.30.56.10 403 476 6.0E-21 T 14-10-2018 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 SMART SM00896 709 801 3.9E-37 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 Pfam PF01588 Putative tRNA binding domain 46 145 1.8E-25 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:3.50.40.10 195 399 1.3E-65 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 Pfam PF03147 Ferredoxin-fold anticodon binding domain 711 801 7.4E-25 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 Pfam PF03484 tRNA synthetase B5 domain 408 472 5.2E-17 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 801 1.3E-208 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:3.30.70.380 710 801 1.5E-24 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:2.40.50.140 39 154 1.7E-66 T 14-10-2018 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 SUPERFAMILY SSF46955 405 477 3.75E-16 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 SMART SM00873 214 387 2.3E-79 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 SUPERFAMILY SSF55681 468 692 3.98E-35 T 14-10-2018 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 Pfam PF03483 B3/4 domain 214 387 4.2E-59 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 795 39.438 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:3.30.930.10 489 692 1.3E-41 T 14-10-2018 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 SMART SM00874 403 472 3.9E-26 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TMO_0199 616357b289c170fd7a7ba70ad75b50ed 802 SUPERFAMILY SSF54991 709 801 2.22E-26 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 TMO_b0251 25a0f4de4487deae692ead26135692db 441 PIRSF PIRSF006066 10 441 2.8E-83 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0251 25a0f4de4487deae692ead26135692db 441 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 27 437 5.0E-88 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0251 25a0f4de4487deae692ead26135692db 441 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 17 431 1.1E-76 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_2681 a7200db9763f3760e10e318d579c9c5d 114 SMART SM01259 24 95 1.2E-41 T 14-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 TMO_2681 a7200db9763f3760e10e318d579c9c5d 114 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 21 96 3.0E-24 T 14-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 TMO_2681 a7200db9763f3760e10e318d579c9c5d 114 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 24 93 1.5E-30 T 14-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 TMO_b0347 fa52de66397b9a85c6494e3c374817b1 334 Gene3D G3DSA:3.40.190.10 16 312 1.0E-121 T 14-10-2018 TMO_b0347 fa52de66397b9a85c6494e3c374817b1 334 PIRSF PIRSF002756 3 326 2.4E-106 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 TMO_b0347 fa52de66397b9a85c6494e3c374817b1 334 SUPERFAMILY SSF53850 14 323 2.99E-97 T 14-10-2018 TMO_b0347 fa52de66397b9a85c6494e3c374817b1 334 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 15 322 8.5E-117 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 TMO_b0347 fa52de66397b9a85c6494e3c374817b1 334 Pfam PF12849 PBP superfamily domain 8 296 7.0E-63 T 14-10-2018 IPR024370 PBP domain TMO_b0347 fa52de66397b9a85c6494e3c374817b1 334 Gene3D G3DSA:3.40.190.10 89 265 1.0E-121 T 14-10-2018 TMO_3487 724145070096f61225da1d72c8f498d8 267 SUPERFAMILY SSF161098 11 257 1.87E-39 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3487 724145070096f61225da1d72c8f498d8 267 Gene3D G3DSA:1.10.3720.10 14 265 6.1E-41 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3487 724145070096f61225da1d72c8f498d8 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 260 8.3E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3564 aac75acc641f95ab56b256f47d415cc6 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 26 89 2.0E-11 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_3564 aac75acc641f95ab56b256f47d415cc6 89 SUPERFAMILY SSF46992 3 86 5.36E-28 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_3564 aac75acc641f95ab56b256f47d415cc6 89 Pfam PF01649 Ribosomal protein S20 2 84 1.1E-24 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_3564 aac75acc641f95ab56b256f47d415cc6 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.142 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_3564 aac75acc641f95ab56b256f47d415cc6 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.4E-23 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_3564 aac75acc641f95ab56b256f47d415cc6 89 Gene3D G3DSA:1.20.58.110 1 87 3.9E-25 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_0530 10ec17c4a18a8dc7d024064415bd1d64 196 SUPERFAMILY SSF46689 11 92 1.8E-23 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0530 10ec17c4a18a8dc7d024064415bd1d64 196 Gene3D G3DSA:1.10.357.10 2 192 5.3E-51 T 14-10-2018 TMO_0530 10ec17c4a18a8dc7d024064415bd1d64 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 2.2E-19 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0530 10ec17c4a18a8dc7d024064415bd1d64 196 SUPERFAMILY SSF48498 87 192 9.78E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_0530 10ec17c4a18a8dc7d024064415bd1d64 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 3.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0530 10ec17c4a18a8dc7d024064415bd1d64 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 3.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0214 89ab6bf344c054010601b822dbc023bf 355 Gene3D G3DSA:1.10.10.60 249 354 4.7E-23 T 14-10-2018 TMO_b0214 89ab6bf344c054010601b822dbc023bf 355 SUPERFAMILY SSF46689 304 351 7.17E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0214 89ab6bf344c054010601b822dbc023bf 355 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 335 6.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_b0214 89ab6bf344c054010601b822dbc023bf 355 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 335 351 6.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_b0214 89ab6bf344c054010601b822dbc023bf 355 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 305 347 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_b0214 89ab6bf344c054010601b822dbc023bf 355 SMART SM00342 268 351 5.4E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0214 89ab6bf344c054010601b822dbc023bf 355 Pfam PF12833 Helix-turn-helix domain 275 351 1.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0214 89ab6bf344c054010601b822dbc023bf 355 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 39 225 8.7E-45 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal TMO_2475 909115649c5b243cbb40c3836cb1fe0b 107 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 28 78 4.2E-18 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 TMO_2562 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Gene3D G3DSA:2.30.40.20 45 95 3.7E-53 T 14-10-2018 TMO_2562 4367b1cc8894b3a59ee5e26d93b6b4d7 381 SUPERFAMILY SSF100879 263 361 2.35E-21 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TMO_2562 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Gene3D G3DSA:3.30.1490.100 265 370 3.6E-20 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TMO_2562 4367b1cc8894b3a59ee5e26d93b6b4d7 381 SUPERFAMILY SSF56672 26 259 1.25E-75 T 14-10-2018 TMO_2562 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Gene3D G3DSA:3.30.70.270 28 189 3.7E-53 T 14-10-2018 TMO_2562 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Pfam PF11799 impB/mucB/samB family C-terminal domain 259 371 9.2E-16 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TMO_2562 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Hamap MF_01113 DNA polymerase IV [dinB]. 25 377 32.901 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 TMO_2562 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Pfam PF00817 impB/mucB/samB family 31 179 5.7E-45 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TMO_2562 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Gene3D G3DSA:1.10.150.20 192 260 1.5E-12 T 14-10-2018 TMO_3320 b91092146412bddd117006e104d0825b 433 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.2E-165 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_3320 b91092146412bddd117006e104d0825b 433 Gene3D G3DSA:3.40.640.10 37 290 1.1E-173 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_3320 b91092146412bddd117006e104d0825b 433 PIRSF PIRSF000412 3 425 6.5E-160 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_3320 b91092146412bddd117006e104d0825b 433 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_3320 b91092146412bddd117006e104d0825b 433 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 421 50.837 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TMO_3320 b91092146412bddd117006e104d0825b 433 Gene3D G3DSA:3.90.1150.10 10 395 1.1E-173 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_3320 b91092146412bddd117006e104d0825b 433 SUPERFAMILY SSF53383 7 420 2.91E-168 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_3254 e2440afaa83ed684d58a6fb523c6a6d0 369 SUPERFAMILY SSF53659 4 367 1.06E-116 T 14-10-2018 TMO_3254 e2440afaa83ed684d58a6fb523c6a6d0 369 Gene3D G3DSA:3.40.718.10 4 368 2.2E-138 T 14-10-2018 TMO_3254 e2440afaa83ed684d58a6fb523c6a6d0 369 SMART SM01329 6 361 1.3E-189 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TMO_3254 e2440afaa83ed684d58a6fb523c6a6d0 369 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 365 50.657 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 TMO_3254 e2440afaa83ed684d58a6fb523c6a6d0 369 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 361 2.5E-145 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 TMO_3254 e2440afaa83ed684d58a6fb523c6a6d0 369 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 TMO_3254 e2440afaa83ed684d58a6fb523c6a6d0 369 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 361 3.1E-130 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TMO_b0056 3240c6ef2a4a67cc74031c64abbc3f4d 280 Gene3D G3DSA:3.40.190.10 37 254 2.2E-54 T 14-10-2018 TMO_b0056 3240c6ef2a4a67cc74031c64abbc3f4d 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 257 1.0E-33 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_b0056 3240c6ef2a4a67cc74031c64abbc3f4d 280 SMART SM00062 44 264 5.8E-27 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_b0056 3240c6ef2a4a67cc74031c64abbc3f4d 280 Gene3D G3DSA:3.40.190.10 131 220 2.2E-54 T 14-10-2018 TMO_b0056 3240c6ef2a4a67cc74031c64abbc3f4d 280 SUPERFAMILY SSF53850 45 258 1.53E-42 T 14-10-2018 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 Pfam PF07724 AAA domain (Cdc48 subfamily) 502 662 3.1E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 Gene3D G3DSA:1.10.8.60 669 771 2.7E-30 T 14-10-2018 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 SUPERFAMILY SSF52540 184 427 4.36E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 Gene3D G3DSA:1.10.1780.10 3 144 4.3E-38 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 227 340 4.0E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 534 552 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 Gene3D G3DSA:3.40.50.300 455 667 2.1E-78 T 14-10-2018 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 SMART SM01086 669 758 2.3E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 Gene3D G3DSA:1.10.8.60 372 454 2.1E-31 T 14-10-2018 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 SUPERFAMILY SSF52540 453 757 8.27E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 671 748 2.4E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 64 6.9E-12 T 14-10-2018 IPR004176 Clp, N-terminal TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 5 750 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 549 567 7.7E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 507 525 7.7E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 611 625 7.7E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 578 596 7.7E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 Gene3D G3DSA:3.40.50.300 182 371 1.6E-63 T 14-10-2018 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 SMART SM00382 503 639 4.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 SMART SM00382 222 366 4.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 SUPERFAMILY SSF81923 3 143 1.57E-57 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TMO_0588 5a7cc0c5c47434e5b06bd4f763f6d0f1 801 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 318 330 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TMO_0958 8f48aa5328cb4944613106681c95c28c 317 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 81 292 3.8E-75 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related TMO_0958 8f48aa5328cb4944613106681c95c28c 317 Gene3D G3DSA:3.40.50.300 37 304 6.8E-86 T 14-10-2018 TMO_0958 8f48aa5328cb4944613106681c95c28c 317 SUPERFAMILY SSF52540 106 291 8.82E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0958 8f48aa5328cb4944613106681c95c28c 317 PIRSF PIRSF028756 39 308 9.1E-72 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 PIRSF PIRSF036684 3 760 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Pfam PF00390 Malic enzyme, N-terminal domain 24 155 1.6E-25 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Gene3D G3DSA:3.40.50.10750 576 728 2.5E-87 T 14-10-2018 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Gene3D G3DSA:3.40.50.10950 449 752 2.5E-87 T 14-10-2018 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 SUPERFAMILY SSF53659 434 755 2.84E-87 T 14-10-2018 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 ProSitePatterns PS00331 Malic enzymes signature. 163 179 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 SUPERFAMILY SSF51735 167 456 1.63E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 SMART SM01274 22 155 1.4E-77 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Pfam PF03949 Malic enzyme, NAD binding domain 169 364 4.7E-23 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Gene3D G3DSA:3.40.50.720 165 448 1.0E-84 T 14-10-2018 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Pfam PF01515 Phosphate acetyl/butaryl transferase 434 752 2.9E-85 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 SUPERFAMILY SSF53223 14 165 1.73E-50 T 14-10-2018 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 SMART SM00919 167 404 3.5E-140 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 TMO_3502 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Gene3D G3DSA:3.40.50.10380 2 164 2.5E-65 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 TMO_2149 b8777cf9e82e449b9c231b13bd4637bd 135 Gene3D G3DSA:2.102.10.10 8 117 3.3E-25 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_2149 b8777cf9e82e449b9c231b13bd4637bd 135 SUPERFAMILY SSF50022 16 119 4.19E-29 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_2149 b8777cf9e82e449b9c231b13bd4637bd 135 Pfam PF13806 Rieske-like [2Fe-2S] domain 17 115 6.5E-13 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 TMO_2149 b8777cf9e82e449b9c231b13bd4637bd 135 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 17 115 1.3E-21 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 TMO_1515 ad144f2f3ebeb5549d909df38b64c44f 1003 ProSitePatterns PS00211 ABC transporters family signature. 905 919 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1515 ad144f2f3ebeb5549d909df38b64c44f 1003 TIGRFAM TIGR03797 NHLM_micro_ABC2: NHLM bacteriocin system ABC transporter, ATP-binding protein 310 1002 5.1E-254 T 14-10-2018 IPR022515 NHPM bacteriocin system ABC transporter, ATP-binding protein TMO_1515 ad144f2f3ebeb5549d909df38b64c44f 1003 Gene3D G3DSA:1.20.1560.10 443 753 2.2E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_1515 ad144f2f3ebeb5549d909df38b64c44f 1003 Pfam PF00664 ABC transporter transmembrane region 453 724 1.8E-19 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_1515 ad144f2f3ebeb5549d909df38b64c44f 1003 Pfam PF00005 ABC transporter 785 933 5.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1515 ad144f2f3ebeb5549d909df38b64c44f 1003 SUPERFAMILY SSF52540 759 1002 5.33E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1515 ad144f2f3ebeb5549d909df38b64c44f 1003 SMART SM00382 794 983 2.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1515 ad144f2f3ebeb5549d909df38b64c44f 1003 SUPERFAMILY SSF90123 446 756 1.57E-38 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_1515 ad144f2f3ebeb5549d909df38b64c44f 1003 Gene3D G3DSA:3.40.50.300 760 1002 4.1E-78 T 14-10-2018 TMO_0550 ed143c7386db5a98d3127f845f02935b 153 Pfam PF03692 Putative zinc- or iron-chelating domain 30 98 3.3E-7 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein TMO_0550 ed143c7386db5a98d3127f845f02935b 153 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 8 153 39.183 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 TMO_0550 ed143c7386db5a98d3127f845f02935b 153 PIRSF PIRSF006173 6 153 4.2E-62 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 TMO_3115 e5c643c91b8a41c27fbb4fdd93977f7a 421 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 42 390 73.521 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TMO_3115 e5c643c91b8a41c27fbb4fdd93977f7a 421 SUPERFAMILY SSF102114 143 344 5.1E-12 T 14-10-2018 TMO_3115 e5c643c91b8a41c27fbb4fdd93977f7a 421 Pfam PF04055 Radical SAM superfamily 146 320 3.7E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_3115 e5c643c91b8a41c27fbb4fdd93977f7a 421 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 42 391 5.2E-126 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TMO_3115 e5c643c91b8a41c27fbb4fdd93977f7a 421 Gene3D G3DSA:1.10.150.530 42 102 8.4E-23 T 14-10-2018 TMO_3115 e5c643c91b8a41c27fbb4fdd93977f7a 421 Gene3D G3DSA:3.20.20.70 104 375 1.0E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3115 e5c643c91b8a41c27fbb4fdd93977f7a 421 PIRSF PIRSF006004 33 402 9.4E-146 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 TMO_b0085 8b2772746182a33f1a8ccc974d0c79f5 274 SUPERFAMILY SSF50475 38 269 1.33E-41 T 14-10-2018 TMO_b0085 8b2772746182a33f1a8ccc974d0c79f5 274 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 38 126 1.9E-12 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_b0085 8b2772746182a33f1a8ccc974d0c79f5 274 Gene3D G3DSA:3.20.180.10 182 268 1.4E-20 T 14-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily TMO_b0085 8b2772746182a33f1a8ccc974d0c79f5 274 Gene3D G3DSA:2.30.110.10 12 175 4.8E-39 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_0604 e51980c51f8d3bda5716eb592dc54a2e 155 Gene3D G3DSA:3.30.1330.40 1 155 9.0E-63 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TMO_0604 e51980c51f8d3bda5716eb592dc54a2e 155 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 6 154 1.3E-38 T 14-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like TMO_0604 e51980c51f8d3bda5716eb592dc54a2e 155 SUPERFAMILY SSF55298 4 154 4.4E-56 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TMO_a0008 400ddbc5a41f85ba703d12e1fa52bdbe 323 SUPERFAMILY SSF51412 10 306 4.58E-52 T 14-10-2018 TMO_a0008 400ddbc5a41f85ba703d12e1fa52bdbe 323 Pfam PF03060 Nitronate monooxygenase 9 75 2.1E-15 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_a0008 400ddbc5a41f85ba703d12e1fa52bdbe 323 Pfam PF03060 Nitronate monooxygenase 84 251 1.2E-33 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_a0008 400ddbc5a41f85ba703d12e1fa52bdbe 323 Gene3D G3DSA:3.20.20.70 7 316 3.8E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_a0041 364bdc57e768fea92a9b4bb40d60375f 188 Pfam PF13628 Domain of unknown function (DUF4142) 46 182 2.1E-34 T 14-10-2018 IPR025419 Domain of unknown function DUF4142 TMO_a0041 364bdc57e768fea92a9b4bb40d60375f 188 Gene3D G3DSA:1.20.1260.10 59 186 3.2E-9 T 14-10-2018 IPR012347 Ferritin-like TMO_0831 b62771fef370937785381db0b04ca3d8 354 Gene3D G3DSA:1.10.10.60 245 351 1.2E-18 T 14-10-2018 TMO_0831 b62771fef370937785381db0b04ca3d8 354 Pfam PF12833 Helix-turn-helix domain 265 340 8.4E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0831 b62771fef370937785381db0b04ca3d8 354 SMART SM00342 258 339 1.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0831 b62771fef370937785381db0b04ca3d8 354 SUPERFAMILY SSF46689 296 341 4.3E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2632 e25ddfe1b1f129771ebe9cb864c3315a 225 Gene3D G3DSA:2.40.50.620 21 86 6.5E-28 T 14-10-2018 TMO_2632 e25ddfe1b1f129771ebe9cb864c3315a 225 Pfam PF00297 Ribosomal protein L3 74 172 1.5E-10 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2632 e25ddfe1b1f129771ebe9cb864c3315a 225 ProSitePatterns PS00474 Ribosomal protein L3 signature. 91 114 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site TMO_2632 e25ddfe1b1f129771ebe9cb864c3315a 225 SUPERFAMILY SSF50447 1 205 1.24E-75 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_2632 e25ddfe1b1f129771ebe9cb864c3315a 225 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 197 32.276 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2632 e25ddfe1b1f129771ebe9cb864c3315a 225 Gene3D G3DSA:2.40.30.10 118 200 3.9E-16 T 14-10-2018 TMO_2632 e25ddfe1b1f129771ebe9cb864c3315a 225 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 1 194 2.9E-80 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1641 c5779d9b633aed44fdcec91cfc0411e1 287 Pfam PF13714 Phosphoenolpyruvate phosphomutase 12 222 3.3E-48 T 14-10-2018 TMO_1641 c5779d9b633aed44fdcec91cfc0411e1 287 Gene3D G3DSA:3.20.20.60 1 285 3.7E-80 T 14-10-2018 TMO_1641 c5779d9b633aed44fdcec91cfc0411e1 287 SUPERFAMILY SSF51621 2 283 1.02E-67 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_a0145 b392235707a0caf61d6454ec1f8e437c 271 SUPERFAMILY SSF56784 20 243 1.23E-51 T 14-10-2018 IPR036412 HAD-like superfamily TMO_a0145 b392235707a0caf61d6454ec1f8e437c 271 Gene3D G3DSA:3.40.50.1000 20 238 1.7E-71 T 14-10-2018 IPR023214 HAD superfamily TMO_a0145 b392235707a0caf61d6454ec1f8e437c 271 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 17 260 38.774 T 14-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 TMO_a0145 b392235707a0caf61d6454ec1f8e437c 271 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 95 239 6.7E-58 T 14-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 TMO_a0145 b392235707a0caf61d6454ec1f8e437c 271 Pfam PF00702 haloacid dehalogenase-like hydrolase 20 228 1.2E-6 T 14-10-2018 TMO_a0145 b392235707a0caf61d6454ec1f8e437c 271 Gene3D G3DSA:1.10.720.60 32 131 1.7E-71 T 14-10-2018 TMO_3519 4f29264a80c18972c44bc210c6e4e6ff 366 Gene3D G3DSA:2.40.50.100 71 203 2.9E-68 T 14-10-2018 TMO_3519 4f29264a80c18972c44bc210c6e4e6ff 366 SUPERFAMILY SSF111369 64 276 1.26E-33 T 14-10-2018 TMO_3519 4f29264a80c18972c44bc210c6e4e6ff 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 271 5.7E-26 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_3519 4f29264a80c18972c44bc210c6e4e6ff 366 Gene3D G3DSA:2.40.30.170 60 278 2.9E-68 T 14-10-2018 TMO_3519 4f29264a80c18972c44bc210c6e4e6ff 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 356 7.0E-75 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_3519 4f29264a80c18972c44bc210c6e4e6ff 366 Gene3D G3DSA:1.10.287.470 105 163 2.9E-68 T 14-10-2018 TMO_3519 4f29264a80c18972c44bc210c6e4e6ff 366 Gene3D G3DSA:2.40.420.20 279 354 2.9E-68 T 14-10-2018 TMO_b0196 be87a73d1c0befa417276e53b0b3e005 383 Pfam PF07690 Major Facilitator Superfamily 9 334 1.2E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_b0196 be87a73d1c0befa417276e53b0b3e005 383 Gene3D G3DSA:1.20.1250.20 1 368 9.7E-27 T 14-10-2018 TMO_b0196 be87a73d1c0befa417276e53b0b3e005 383 SUPERFAMILY SSF103473 4 372 2.35E-34 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0387 82e97380feadaf3a061c6e779f7e920e 259 Pfam PF08220 DeoR-like helix-turn-helix domain 10 61 4.9E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_0387 82e97380feadaf3a061c6e779f7e920e 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 10 44 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 TMO_0387 82e97380feadaf3a061c6e779f7e920e 259 SMART SM00420 10 62 7.1E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_0387 82e97380feadaf3a061c6e779f7e920e 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 42 60 8.1E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_0387 82e97380feadaf3a061c6e779f7e920e 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 28 42 8.1E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_0387 82e97380feadaf3a061c6e779f7e920e 259 SMART SM01134 77 238 1.9E-53 T 14-10-2018 TMO_0387 82e97380feadaf3a061c6e779f7e920e 259 Pfam PF00455 DeoR C terminal sensor domain 79 237 6.2E-42 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain TMO_0387 82e97380feadaf3a061c6e779f7e920e 259 Gene3D G3DSA:1.10.10.10 1 57 6.0E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0387 82e97380feadaf3a061c6e779f7e920e 259 SUPERFAMILY SSF100950 79 238 6.88E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_0387 82e97380feadaf3a061c6e779f7e920e 259 SUPERFAMILY SSF46785 8 78 1.92E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0387 82e97380feadaf3a061c6e779f7e920e 259 Gene3D G3DSA:3.30.750.70 75 161 1.3E-5 T 14-10-2018 TMO_0547 6a371645e72912763aac60d474c7778d 392 Gene3D G3DSA:3.40.50.1970 3 188 3.6E-54 T 14-10-2018 TMO_0547 6a371645e72912763aac60d474c7778d 392 Pfam PF00465 Iron-containing alcohol dehydrogenase 16 383 2.1E-116 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 TMO_0547 6a371645e72912763aac60d474c7778d 392 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 TMO_0547 6a371645e72912763aac60d474c7778d 392 Gene3D G3DSA:1.20.1090.10 189 392 1.6E-63 T 14-10-2018 TMO_0547 6a371645e72912763aac60d474c7778d 392 SUPERFAMILY SSF56796 8 391 1.96E-117 T 14-10-2018 TMO_c0133 68b45a586024af1741d165906cf23598 166 Pfam PF13499 EF-hand domain pair 46 115 2.2E-9 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 TMO_c0133 68b45a586024af1741d165906cf23598 166 Pfam PF13202 EF hand 118 136 2.0E-4 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 TMO_c0133 68b45a586024af1741d165906cf23598 166 ProSitePatterns PS00018 EF-hand calcium-binding domain. 55 67 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site TMO_c0133 68b45a586024af1741d165906cf23598 166 SUPERFAMILY SSF47473 43 136 1.54E-16 T 14-10-2018 IPR011992 EF-hand domain pair TMO_c0133 68b45a586024af1741d165906cf23598 166 Gene3D G3DSA:1.10.238.10 36 76 2.0E-6 T 14-10-2018 TMO_c0133 68b45a586024af1741d165906cf23598 166 ProSitePatterns PS00018 EF-hand calcium-binding domain. 101 113 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site TMO_c0133 68b45a586024af1741d165906cf23598 166 SMART SM00054 46 74 0.71 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 TMO_c0133 68b45a586024af1741d165906cf23598 166 SMART SM00054 92 120 0.17 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 TMO_c0133 68b45a586024af1741d165906cf23598 166 Gene3D G3DSA:1.10.238.10 87 152 1.4E-11 T 14-10-2018 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 SUPERFAMILY SSF53067 159 390 1.11E-66 T 14-10-2018 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 TIGRFAM TIGR00016 ackA: acetate kinase 2 390 1.1E-95 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 319 335 4.6E-26 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 371 383 4.6E-26 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 203 224 4.6E-26 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 174 187 4.6E-26 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 6 17 4.6E-26 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 297 310 4.6E-26 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 Gene3D G3DSA:3.30.420.40 5 196 1.5E-55 T 14-10-2018 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 PIRSF PIRSF000722 2 391 1.1E-121 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 SUPERFAMILY SSF53067 5 195 1.42E-53 T 14-10-2018 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 Hamap MF_00020 Acetate kinase [ackA]. 1 392 143.102 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 Pfam PF00871 Acetokinase family 6 384 5.7E-97 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TMO_2568 cd6f5858bd7d1ca8ab4753882e7aba75 392 Gene3D G3DSA:3.30.420.40 198 391 1.1E-62 T 14-10-2018 TMO_b0175 5dc227d318170a9e36cee564b938378a 489 SUPERFAMILY SSF75304 6 480 4.06E-125 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0175 5dc227d318170a9e36cee564b938378a 489 Pfam PF01425 Amidase 32 470 2.2E-98 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0175 5dc227d318170a9e36cee564b938378a 489 Gene3D G3DSA:3.90.1300.10 12 479 4.1E-125 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 289 1.8E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 1.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 467 1.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 1.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 1.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 SMART SM00387 336 470 8.7E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 SUPERFAMILY SSF55874 279 468 2.23E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 Gene3D G3DSA:1.10.287.130 199 288 9.3E-29 T 14-10-2018 TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 469 2.7E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 Gene3D G3DSA:3.30.565.10 291 472 6.5E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 SUPERFAMILY SSF47384 208 289 1.28E-23 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 Gene3D G3DSA:3.30.450.20 72 198 5.4E-7 T 14-10-2018 TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 SUPERFAMILY SSF55785 76 200 7.44E-9 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 Pfam PF12860 PAS fold 92 206 1.7E-18 T 14-10-2018 TMO_c0562 38abe10b9ad444f83faf4125d0ca254b 477 SMART SM00388 222 290 5.0E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_2962 3a224dfebaa3f3ee723985fe56a1f22c 87 Gene3D G3DSA:1.10.8.1250 12 85 1.2E-13 T 14-10-2018 IPR038296 Antitoxin ParD superfamily TMO_2962 3a224dfebaa3f3ee723985fe56a1f22c 87 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 5 72 6.4E-22 T 14-10-2018 IPR022789 Antitoxin ParD TMO_2962 3a224dfebaa3f3ee723985fe56a1f22c 87 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 8 78 6.9E-9 T 14-10-2018 IPR022789 Antitoxin ParD TMO_2962 3a224dfebaa3f3ee723985fe56a1f22c 87 SUPERFAMILY SSF47598 2 46 3.11E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_1692 e3335b84f08351c8ce239bbf2e81b20b 340 Gene3D G3DSA:3.20.20.30 5 335 2.1E-94 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 TMO_1692 e3335b84f08351c8ce239bbf2e81b20b 340 Pfam PF00296 Luciferase-like monooxygenase 19 303 3.4E-35 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 TMO_1692 e3335b84f08351c8ce239bbf2e81b20b 340 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 331 1.6E-127 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 TMO_1692 e3335b84f08351c8ce239bbf2e81b20b 340 SUPERFAMILY SSF51679 8 331 2.09E-82 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 TMO_a0329 7855b06083c31dbb1d71be827dbe1faf 374 Gene3D G3DSA:1.10.760.10 258 353 3.9E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_a0329 7855b06083c31dbb1d71be827dbe1faf 374 Pfam PF00034 Cytochrome c 284 349 2.7E-5 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0329 7855b06083c31dbb1d71be827dbe1faf 374 Gene3D G3DSA:1.10.760.10 47 160 4.0E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_a0329 7855b06083c31dbb1d71be827dbe1faf 374 SUPERFAMILY SSF46626 61 167 2.58E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_a0329 7855b06083c31dbb1d71be827dbe1faf 374 Gene3D G3DSA:1.10.760.10 181 252 1.7E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_a0329 7855b06083c31dbb1d71be827dbe1faf 374 SUPERFAMILY SSF46626 182 262 6.3E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_a0329 7855b06083c31dbb1d71be827dbe1faf 374 SUPERFAMILY SSF46626 262 349 2.18E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_a0329 7855b06083c31dbb1d71be827dbe1faf 374 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 73 153 1.6E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 634 4.1E-241 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 SUPERFAMILY SSF56712 1 608 3.01E-189 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Gene3D G3DSA:1.10.460.10 137 558 5.2E-168 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF01751 Toprim domain 3 115 4.8E-25 T 14-10-2018 IPR006171 TOPRIM domain TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF13368 Topoisomerase C-terminal repeat 663 722 3.3E-14 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF13368 Topoisomerase C-terminal repeat 725 777 2.4E-18 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF13368 Topoisomerase C-terminal repeat 790 842 3.7E-17 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Gene3D G3DSA:2.70.20.10 186 465 5.2E-168 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 601 634 4.2E-13 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 SMART SM00437 248 518 6.3E-123 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 SMART SM00493 1 101 4.5E-29 T 14-10-2018 IPR006171 TOPRIM domain TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 SMART SM00436 106 194 1.4E-51 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 298 307 9.7E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 9.7E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 9.7E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 481 495 9.7E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 376 392 9.7E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Gene3D G3DSA:3.30.65.10 600 637 2.7E-5 T 14-10-2018 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Gene3D G3DSA:1.10.290.10 256 391 5.2E-168 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 SUPERFAMILY SSF57783 600 635 2.89E-8 T 14-10-2018 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Gene3D G3DSA:3.40.50.140 1 136 6.9E-50 T 14-10-2018 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 285 307 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF01131 DNA topoisomerase 130 555 2.1E-129 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_2552 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 746 54.424 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 TMO_1799 b4d4d5c323859bf63a84a995d7090e15 434 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_1799 b4d4d5c323859bf63a84a995d7090e15 434 Pfam PF00202 Aminotransferase class-III 26 427 1.7E-92 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_1799 b4d4d5c323859bf63a84a995d7090e15 434 Gene3D G3DSA:3.90.1150.10 32 424 1.3E-142 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_1799 b4d4d5c323859bf63a84a995d7090e15 434 PIRSF PIRSF000521 11 130 1.0E-6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_1799 b4d4d5c323859bf63a84a995d7090e15 434 PIRSF PIRSF000521 122 432 8.6E-31 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_1799 b4d4d5c323859bf63a84a995d7090e15 434 SUPERFAMILY SSF53383 8 430 4.08E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_1799 b4d4d5c323859bf63a84a995d7090e15 434 Gene3D G3DSA:3.40.640.10 61 324 1.3E-142 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0794 6f271c1be94e23fb246dd6a5c6e7840c 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 236 251 5.9E-32 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0794 6f271c1be94e23fb246dd6a5c6e7840c 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 387 406 5.9E-32 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0794 6f271c1be94e23fb246dd6a5c6e7840c 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 5.9E-32 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0794 6f271c1be94e23fb246dd6a5c6e7840c 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 5.9E-32 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0794 6f271c1be94e23fb246dd6a5c6e7840c 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 310 326 5.9E-32 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0794 6f271c1be94e23fb246dd6a5c6e7840c 691 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 546 5.6E-203 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0794 6f271c1be94e23fb246dd6a5c6e7840c 691 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 689 1.0E-188 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_c0794 6f271c1be94e23fb246dd6a5c6e7840c 691 SUPERFAMILY SSF109604 332 483 5.23E-18 T 14-10-2018 TMO_c0794 6f271c1be94e23fb246dd6a5c6e7840c 691 Pfam PF05746 DALR anticodon binding domain 577 682 1.5E-6 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TMO_c0794 6f271c1be94e23fb246dd6a5c6e7840c 691 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 689 23.966 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TMO_0472 2fff6bdd197f2ddde0f833060e30f221 150 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TMO_0472 2fff6bdd197f2ddde0f833060e30f221 150 Pfam PF01799 [2Fe-2S] binding domain 72 143 1.3E-27 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_0472 2fff6bdd197f2ddde0f833060e30f221 150 Gene3D G3DSA:3.10.20.30 1 73 5.8E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_0472 2fff6bdd197f2ddde0f833060e30f221 150 SUPERFAMILY SSF47741 72 148 1.44E-30 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily TMO_0472 2fff6bdd197f2ddde0f833060e30f221 150 SUPERFAMILY SSF54292 3 77 1.84E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_0472 2fff6bdd197f2ddde0f833060e30f221 150 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 60 7.6E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_0472 2fff6bdd197f2ddde0f833060e30f221 150 Gene3D G3DSA:1.10.150.120 74 150 1.9E-25 T 14-10-2018 TMO_d0008 2c697b979dba6a4e795b825d2f3ef24a 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 20.991 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 TMO_d0008 2c697b979dba6a4e795b825d2f3ef24a 95 SUPERFAMILY SSF141000 3 93 1.7E-25 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 TMO_d0008 2c697b979dba6a4e795b825d2f3ef24a 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 1.0E-20 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 TMO_d0008 2c697b979dba6a4e795b825d2f3ef24a 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 6.4E-17 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 TMO_d0008 2c697b979dba6a4e795b825d2f3ef24a 95 Gene3D G3DSA:1.10.20.60 1 93 2.6E-22 T 14-10-2018 TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 SUPERFAMILY SSF51735 6 232 2.72E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 Gene3D G3DSA:3.40.50.720 5 265 3.8E-60 T 14-10-2018 TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 PIRSF PIRSF000126 1 263 1.0E-61 T 14-10-2018 TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 Pfam PF00106 short chain dehydrogenase 7 194 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0223 419a7a429a44afc62b8c8562da6d9bb3 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_1972 3d5029215de7402920e13cc288797432 692 Gene3D G3DSA:3.30.70.20 124 204 3.5E-6 T 14-10-2018 TMO_1972 3d5029215de7402920e13cc288797432 692 SUPERFAMILY SSF54862 75 211 2.85E-39 T 14-10-2018 TMO_1972 3d5029215de7402920e13cc288797432 692 SUPERFAMILY SSF54292 1 74 7.27E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_1972 3d5029215de7402920e13cc288797432 692 Gene3D G3DSA:3.40.50.740 272 406 4.4E-8 T 14-10-2018 TMO_1972 3d5029215de7402920e13cc288797432 692 SMART SM00929 83 123 9.7E-21 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1972 3d5029215de7402920e13cc288797432 692 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1972 3d5029215de7402920e13cc288797432 692 Gene3D G3DSA:3.40.50.740 438 635 2.2E-20 T 14-10-2018 TMO_1972 3d5029215de7402920e13cc288797432 692 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 639 673 3.2E-15 T 14-10-2018 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1972 3d5029215de7402920e13cc288797432 692 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 597 3.6E-232 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1972 3d5029215de7402920e13cc288797432 692 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1972 3d5029215de7402920e13cc288797432 692 Pfam PF00384 Molybdopterin oxidoreductase 271 598 1.6E-68 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1972 3d5029215de7402920e13cc288797432 692 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 122 4.7E-17 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1972 3d5029215de7402920e13cc288797432 692 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 76 1.2E-19 T 14-10-2018 TMO_1972 3d5029215de7402920e13cc288797432 692 SUPERFAMILY SSF53706 213 632 5.44E-101 T 14-10-2018 TMO_1972 3d5029215de7402920e13cc288797432 692 Gene3D G3DSA:3.10.20.740 1 123 8.1E-43 T 14-10-2018 TMO_1972 3d5029215de7402920e13cc288797432 692 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 Pfam PF00672 HAMP domain 212 258 7.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 376 521 2.2E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 SMART SM00283 294 555 6.2E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 SMART SM00304 212 265 3.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 Gene3D G3DSA:1.10.287.950 271 561 1.3E-53 T 14-10-2018 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 476 505 2.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 2.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 322 351 2.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 2.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 426 2.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 4.0E-25 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 Gene3D G3DSA:1.20.1480.50 172 270 3.6E-14 T 14-10-2018 TMO_c0510 3ca993c0955d6675a2f157c607e673a8 561 SUPERFAMILY SSF58104 240 554 8.63E-60 T 14-10-2018 TMO_a0233 72c4ad9be42a699fb1eb4268a1d9d285 516 Gene3D G3DSA:3.30.300.310 410 512 1.5E-32 T 14-10-2018 TMO_a0233 72c4ad9be42a699fb1eb4268a1d9d285 516 SUPERFAMILY SSF56801 3 511 9.55E-142 T 14-10-2018 TMO_a0233 72c4ad9be42a699fb1eb4268a1d9d285 516 Pfam PF13193 AMP-binding enzyme C-terminal domain 423 498 7.7E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0233 72c4ad9be42a699fb1eb4268a1d9d285 516 Gene3D G3DSA:3.40.50.12780 1 407 2.0E-98 T 14-10-2018 TMO_a0233 72c4ad9be42a699fb1eb4268a1d9d285 516 Pfam PF00501 AMP-binding enzyme 8 414 4.8E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0383 18f21e0b4376159cd3d19f140d6000b1 256 Pfam PF03473 MOSC domain 138 253 3.2E-12 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 TMO_0383 18f21e0b4376159cd3d19f140d6000b1 256 Pfam PF03476 MOSC N-terminal beta barrel domain 6 103 2.1E-8 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 TMO_0383 18f21e0b4376159cd3d19f140d6000b1 256 SUPERFAMILY SSF50800 4 254 3.66E-24 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily TMO_0383 18f21e0b4376159cd3d19f140d6000b1 256 Gene3D G3DSA:2.40.33.20 131 256 4.3E-10 T 14-10-2018 TMO_1711 a68f8addf54f8a9cf355302f2ed42d21 154 Gene3D G3DSA:3.20.80.10 12 153 1.5E-14 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily TMO_1711 a68f8addf54f8a9cf355302f2ed42d21 154 SUPERFAMILY SSF55136 21 144 6.28E-6 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily TMO_0219 31c0b818e043a444eef3072ea708e634 286 SMART SM00342 20 103 1.5E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0219 31c0b818e043a444eef3072ea708e634 286 Gene3D G3DSA:3.20.80.10 137 285 8.0E-29 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily TMO_0219 31c0b818e043a444eef3072ea708e634 286 Gene3D G3DSA:1.10.10.60 2 108 1.6E-26 T 14-10-2018 TMO_0219 31c0b818e043a444eef3072ea708e634 286 SUPERFAMILY SSF55136 133 284 4.97E-24 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily TMO_0219 31c0b818e043a444eef3072ea708e634 286 Pfam PF06445 GyrI-like small molecule binding domain 137 284 9.7E-20 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain TMO_0219 31c0b818e043a444eef3072ea708e634 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 9.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_0219 31c0b818e043a444eef3072ea708e634 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 9.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_0219 31c0b818e043a444eef3072ea708e634 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 57 99 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_0219 31c0b818e043a444eef3072ea708e634 286 Pfam PF12833 Helix-turn-helix domain 26 104 1.2E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0219 31c0b818e043a444eef3072ea708e634 286 SMART SM00871 135 285 4.6E-24 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding TMO_0219 31c0b818e043a444eef3072ea708e634 286 SUPERFAMILY SSF46689 56 105 4.17E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0219 31c0b818e043a444eef3072ea708e634 286 SUPERFAMILY SSF46689 5 50 9.41E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0253 4a759ee4cf990824f4c24d7687239049 315 Gene3D G3DSA:3.40.50.720 8 122 8.7E-31 T 14-10-2018 TMO_a0253 4a759ee4cf990824f4c24d7687239049 315 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 120 2.0E-15 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TMO_a0253 4a759ee4cf990824f4c24d7687239049 315 SUPERFAMILY SSF51735 12 171 3.03E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0253 4a759ee4cf990824f4c24d7687239049 315 Gene3D G3DSA:3.30.360.10 123 315 4.4E-75 T 14-10-2018 TMO_1827 6cef8ea03652a0267f2876cf0b465c6f 157 Pfam PF05443 ROS/MUCR transcriptional regulator protein 15 140 7.8E-52 T 14-10-2018 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 TMO_1827 6cef8ea03652a0267f2876cf0b465c6f 157 Gene3D G3DSA:1.10.10.1550 67 123 7.5E-32 T 14-10-2018 TMO_0389 faffca9e67023b53b1907df0d7c5dce3 270 SUPERFAMILY SSF46689 171 221 1.43E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0389 faffca9e67023b53b1907df0d7c5dce3 270 SMART SM00342 188 270 2.7E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0389 faffca9e67023b53b1907df0d7c5dce3 270 Pfam PF12833 Helix-turn-helix domain 194 270 5.8E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0389 faffca9e67023b53b1907df0d7c5dce3 270 Gene3D G3DSA:1.10.10.60 168 270 9.5E-21 T 14-10-2018 TMO_0389 faffca9e67023b53b1907df0d7c5dce3 270 SUPERFAMILY SSF46689 225 270 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0862 942fb713e3b92171f5204694ccc06ee4 284 Pfam PF00685 Sulfotransferase domain 118 281 8.2E-20 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 TMO_c0862 942fb713e3b92171f5204694ccc06ee4 284 Gene3D G3DSA:3.40.50.300 6 284 1.8E-43 T 14-10-2018 TMO_c0862 942fb713e3b92171f5204694ccc06ee4 284 SUPERFAMILY SSF52540 7 283 8.86E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0645 865ded02d56743a91da9b5f9db132baa 331 PIRSF PIRSF006470 2 331 9.3E-94 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 TMO_c0645 865ded02d56743a91da9b5f9db132baa 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 41 291 4.3E-71 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 TMO_c0645 865ded02d56743a91da9b5f9db132baa 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 314 2.2E-80 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_c0645 865ded02d56743a91da9b5f9db132baa 331 Gene3D G3DSA:3.40.190.170 26 328 6.9E-98 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_a0043 6ffc149f53d919ba1ed081064f88b464 379 Pfam PF05974 Domain of unknown function (DUF892) 216 361 8.3E-26 T 14-10-2018 IPR010287 Domain of unknown function DUF892 TMO_a0043 6ffc149f53d919ba1ed081064f88b464 379 Pfam PF01814 Hemerythrin HHE cation binding domain 54 166 7.7E-15 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TMO_a0043 6ffc149f53d919ba1ed081064f88b464 379 Gene3D G3DSA:1.20.1260.10 210 376 1.2E-38 T 14-10-2018 IPR012347 Ferritin-like TMO_a0043 6ffc149f53d919ba1ed081064f88b464 379 SUPERFAMILY SSF47240 208 359 2.84E-23 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_a0043 6ffc149f53d919ba1ed081064f88b464 379 Gene3D G3DSA:1.20.120.520 44 185 6.9E-11 T 14-10-2018 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 Pfam PF01571 Aminomethyltransferase folate-binding domain 619 882 2.3E-69 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 Gene3D G3DSA:3.50.50.60 295 420 2.3E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 SUPERFAMILY SSF101790 901 997 1.59E-18 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 SUPERFAMILY SSF103025 612 898 4.87E-90 T 14-10-2018 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 103 1.5E-28 T 14-10-2018 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 PIRSF PIRSF037980 2 1000 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 Gene3D G3DSA:3.10.20.440 13 109 4.8E-9 T 14-10-2018 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 284 292 3.7E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 173 195 3.7E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 173 429 3.9E-13 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 Gene3D G3DSA:1.10.10.1100 508 584 2.3E-92 T 14-10-2018 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 889 986 1.9E-14 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 7 999 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 SUPERFAMILY SSF51905 162 483 2.04E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 Gene3D G3DSA:3.50.50.60 173 591 2.3E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 Gene3D G3DSA:2.40.30.110 905 992 5.4E-8 T 14-10-2018 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 193 5.1E-8 T 14-10-2018 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 5.1E-8 T 14-10-2018 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 412 428 5.1E-8 T 14-10-2018 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 Gene3D G3DSA:3.30.70.1400 669 895 1.1E-82 T 14-10-2018 TMO_b0542 65e57a219f6ce6958c68f10aa6dc844d 1000 Gene3D G3DSA:3.30.1360.120 612 871 1.1E-82 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TMO_0344 77f87a672a5bb9be63a3ef90211f9d63 409 SUPERFAMILY SSF56796 38 394 1.44E-106 T 14-10-2018 TMO_0344 77f87a672a5bb9be63a3ef90211f9d63 409 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 32 393 65.034 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TMO_0344 77f87a672a5bb9be63a3ef90211f9d63 409 Gene3D G3DSA:1.20.1090.10 205 398 3.7E-57 T 14-10-2018 TMO_0344 77f87a672a5bb9be63a3ef90211f9d63 409 PIRSF PIRSF001455 35 398 5.6E-96 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TMO_0344 77f87a672a5bb9be63a3ef90211f9d63 409 Gene3D G3DSA:3.40.50.1970 26 204 5.9E-60 T 14-10-2018 TMO_0344 77f87a672a5bb9be63a3ef90211f9d63 409 Pfam PF01761 3-dehydroquinate synthase 99 362 1.5E-96 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TMO_0344 77f87a672a5bb9be63a3ef90211f9d63 409 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 44 389 2.1E-106 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TMO_b0328 695e38a383a4a14b81b91f21c72c3062 256 PRINTS PR01714 Ferric iron reductase signature 224 242 1.4E-5 T 14-10-2018 IPR008090 Ferric iron reductase TMO_b0328 695e38a383a4a14b81b91f21c72c3062 256 PRINTS PR01714 Ferric iron reductase signature 152 168 1.4E-5 T 14-10-2018 IPR008090 Ferric iron reductase TMO_b0328 695e38a383a4a14b81b91f21c72c3062 256 PRINTS PR01714 Ferric iron reductase signature 67 82 1.4E-5 T 14-10-2018 IPR008090 Ferric iron reductase TMO_b0328 695e38a383a4a14b81b91f21c72c3062 256 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 64 244 6.0E-33 T 14-10-2018 IPR008090 Ferric iron reductase TMO_b0328 695e38a383a4a14b81b91f21c72c3062 256 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 224 244 2.2E-8 T 14-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 TMO_b0328 695e38a383a4a14b81b91f21c72c3062 256 Pfam PF06276 Ferric iron reductase FhuF-like transporter 67 219 9.0E-19 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain TMO_0148 aa19e473a0a0fa032a18196d9028345d 258 Gene3D G3DSA:3.40.50.150 9 183 9.2E-20 T 14-10-2018 TMO_0148 aa19e473a0a0fa032a18196d9028345d 258 SUPERFAMILY SSF53335 21 215 1.26E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0148 aa19e473a0a0fa032a18196d9028345d 258 Pfam PF08241 Methyltransferase domain 82 131 7.8E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TMO_3025 412784fbec26d01b8ce8d61e80eac1df 550 SUPERFAMILY SSF51395 30 515 2.77E-132 T 14-10-2018 TMO_3025 412784fbec26d01b8ce8d61e80eac1df 550 Pfam PF01645 Conserved region in glutamate synthase 172 488 2.3E-85 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 TMO_3025 412784fbec26d01b8ce8d61e80eac1df 550 PIRSF PIRSF006429 21 547 2.1E-153 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein TMO_3025 412784fbec26d01b8ce8d61e80eac1df 550 PIRSF PIRSF500060 25 544 1.5E-216 T 14-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria TMO_3025 412784fbec26d01b8ce8d61e80eac1df 550 Gene3D G3DSA:3.20.20.70 164 514 2.9E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_c0929 80486ba5f40cf81470417470f1d59e30 250 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 246 4.8E-10 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_c0929 80486ba5f40cf81470417470f1d59e30 250 SUPERFAMILY SSF52540 5 247 1.41E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0929 80486ba5f40cf81470417470f1d59e30 250 Pfam PF00005 ABC transporter 22 176 4.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0929 80486ba5f40cf81470417470f1d59e30 250 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0929 80486ba5f40cf81470417470f1d59e30 250 SMART SM00382 30 224 7.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0929 80486ba5f40cf81470417470f1d59e30 250 Gene3D G3DSA:3.40.50.300 4 250 1.4E-57 T 14-10-2018 TMO_c0082 ef63957dacfe5c773cda2018a9afbf53 126 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 94 110 1.4E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_c0082 ef63957dacfe5c773cda2018a9afbf53 126 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 73 1.4E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_c0082 ef63957dacfe5c773cda2018a9afbf53 126 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 12 20 1.4E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_c0082 ef63957dacfe5c773cda2018a9afbf53 126 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 119 11.679 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_c0082 ef63957dacfe5c773cda2018a9afbf53 126 TIGRFAM TIGR00077 lspA: signal peptidase II 2 117 1.3E-34 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_c0082 ef63957dacfe5c773cda2018a9afbf53 126 ProSitePatterns PS00855 Signal peptidases II signature. 61 73 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_c0082 ef63957dacfe5c773cda2018a9afbf53 126 Pfam PF01252 Signal peptidase (SPase) II 3 113 7.6E-31 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TMO_0888 a4e431061f9563d7987c33598a2d705e 457 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TMO_0888 a4e431061f9563d7987c33598a2d705e 457 Gene3D G3DSA:1.10.275.10 3 141 1.5E-51 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal TMO_0888 a4e431061f9563d7987c33598a2d705e 457 SUPERFAMILY SSF48557 2 456 2.2E-134 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 TMO_0888 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00145 Argininosuccinate lyase family signature 319 335 5.6E-5 T 14-10-2018 TMO_0888 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00145 Argininosuccinate lyase family signature 177 197 5.6E-5 T 14-10-2018 TMO_0888 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00145 Argininosuccinate lyase family signature 136 158 5.6E-5 T 14-10-2018 TMO_0888 a4e431061f9563d7987c33598a2d705e 457 Gene3D G3DSA:1.10.40.30 410 457 2.3E-12 T 14-10-2018 TMO_0888 a4e431061f9563d7987c33598a2d705e 457 Pfam PF00206 Lyase 13 344 4.7E-88 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal TMO_0888 a4e431061f9563d7987c33598a2d705e 457 Pfam PF10415 Fumarase C C-terminus 410 457 3.1E-12 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TMO_0888 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 1.8E-29 T 14-10-2018 IPR000362 Fumarate lyase family TMO_0888 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 1.8E-29 T 14-10-2018 IPR000362 Fumarate lyase family TMO_0888 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 1.8E-29 T 14-10-2018 IPR000362 Fumarate lyase family TMO_0888 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 1.8E-29 T 14-10-2018 IPR000362 Fumarate lyase family TMO_0888 a4e431061f9563d7987c33598a2d705e 457 Gene3D G3DSA:1.20.200.10 142 408 1.1E-108 T 14-10-2018 TMO_c0553 3035fe1a0e6b1b1e6965513e09fcc54d 841 Pfam PF00593 TonB dependent receptor 380 840 6.8E-34 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_c0553 3035fe1a0e6b1b1e6965513e09fcc54d 841 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 150 841 2.3E-107 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 TMO_c0553 3035fe1a0e6b1b1e6965513e09fcc54d 841 Pfam PF07715 TonB-dependent Receptor Plug Domain 165 263 6.9E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_c0553 3035fe1a0e6b1b1e6965513e09fcc54d 841 SUPERFAMILY SSF56935 145 841 4.4E-73 T 14-10-2018 TMO_c0553 3035fe1a0e6b1b1e6965513e09fcc54d 841 Gene3D G3DSA:2.170.130.10 161 275 3.0E-25 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_c0553 3035fe1a0e6b1b1e6965513e09fcc54d 841 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 824 841 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site TMO_c0553 3035fe1a0e6b1b1e6965513e09fcc54d 841 SMART SM00965 85 136 6.9E-8 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_c0553 3035fe1a0e6b1b1e6965513e09fcc54d 841 Gene3D G3DSA:3.55.50.30 56 160 5.8E-24 T 14-10-2018 TMO_c0553 3035fe1a0e6b1b1e6965513e09fcc54d 841 Gene3D G3DSA:2.40.170.20 276 841 1.6E-78 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_0301 0f30eae1d2d252b27a93a63a3ba7d659 280 Gene3D G3DSA:1.10.3730.10 174 280 1.6E-34 T 14-10-2018 TMO_0301 0f30eae1d2d252b27a93a63a3ba7d659 280 SUPERFAMILY SSF48179 171 278 2.04E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_0301 0f30eae1d2d252b27a93a63a3ba7d659 280 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 14 278 1.9E-71 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TMO_0301 0f30eae1d2d252b27a93a63a3ba7d659 280 Gene3D G3DSA:3.40.50.720 11 173 1.8E-42 T 14-10-2018 TMO_0301 0f30eae1d2d252b27a93a63a3ba7d659 280 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 11 278 24.77 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TMO_0301 0f30eae1d2d252b27a93a63a3ba7d659 280 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 172 278 4.1E-30 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TMO_0301 0f30eae1d2d252b27a93a63a3ba7d659 280 SUPERFAMILY SSF51735 13 169 4.62E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0301 0f30eae1d2d252b27a93a63a3ba7d659 280 PIRSF PIRSF000193 11 280 2.9E-63 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TMO_0301 0f30eae1d2d252b27a93a63a3ba7d659 280 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 15 108 2.3E-13 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 239 4.1E-110 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 SUPERFAMILY SSF51735 3 238 1.36E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 Gene3D G3DSA:3.40.50.720 1 238 1.4E-76 T 14-10-2018 TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.3E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.3E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.3E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.3E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.3E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 1.1E-5 T 14-10-2018 TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_0153 5042c88d9315007485ebf0a88a4c9f3e 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 235 1.5E-58 T 14-10-2018 TMO_2012 ae35d75f4594184c19ad9714f4544576 398 Gene3D G3DSA:3.40.50.2300 38 363 1.5E-130 T 14-10-2018 TMO_2012 ae35d75f4594184c19ad9714f4544576 398 SUPERFAMILY SSF53822 28 394 6.73E-74 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_2012 ae35d75f4594184c19ad9714f4544576 398 Gene3D G3DSA:3.40.50.2300 150 371 1.5E-130 T 14-10-2018 TMO_2012 ae35d75f4594184c19ad9714f4544576 398 Pfam PF13458 Periplasmic binding protein 28 371 1.1E-59 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_0108 ab14235e80cf430b52ab01353a59584f 415 SUPERFAMILY SSF53383 11 412 8.94E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_0108 ab14235e80cf430b52ab01353a59584f 415 Gene3D G3DSA:3.90.1150.10 16 407 2.3E-168 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_0108 ab14235e80cf430b52ab01353a59584f 415 Gene3D G3DSA:3.40.640.10 44 305 2.3E-168 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0108 ab14235e80cf430b52ab01353a59584f 415 Pfam PF00266 Aminotransferase class-V 33 403 9.7E-146 T 14-10-2018 IPR000192 Aminotransferase class V domain TMO_0108 ab14235e80cf430b52ab01353a59584f 415 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 15 414 7.9E-177 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TMO_c0568 c5562db543d85d712bf7e1dd2063f19a 165 SUPERFAMILY SSF51182 17 153 1.86E-27 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0568 c5562db543d85d712bf7e1dd2063f19a 165 Gene3D G3DSA:2.60.120.10 25 158 1.1E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_c0568 c5562db543d85d712bf7e1dd2063f19a 165 Pfam PF07883 Cupin domain 62 134 2.8E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_a0021 43ab80b9638d5b665dc90c9e78f4f044 249 Pfam PF13683 Integrase core domain 86 150 3.0E-17 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TMO_a0021 43ab80b9638d5b665dc90c9e78f4f044 249 SUPERFAMILY SSF53098 1 157 4.4E-22 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_a0021 43ab80b9638d5b665dc90c9e78f4f044 249 Gene3D G3DSA:3.30.420.10 1 148 1.7E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_3043 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 Gene3D G3DSA:3.50.50.60 6 361 2.0E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3043 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 Pfam PF01266 FAD dependent oxidoreductase 6 363 1.2E-66 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_3043 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 SUPERFAMILY SSF51905 4 367 3.28E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3043 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 Gene3D G3DSA:3.30.9.10 87 322 2.0E-128 T 14-10-2018 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 SMART SM00823 Phosphopantetheine attachment site 962 1034 0.0016 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 SMART SM00824 Thioesterase 1069 1277 0.0032 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 ProSitePatterns PS00012 Phosphopantetheine attachment site. 989 1004 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 SUPERFAMILY SSF52777 6 181 5.67E-21 T 14-10-2018 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 Pfam PF00668 Condensation domain 5 386 2.6E-33 T 14-10-2018 IPR001242 Condensation domain TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:3.30.300.30 856 956 4.5E-24 T 14-10-2018 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:3.40.50.12780 455 855 5.1E-119 T 14-10-2018 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:3.40.50.1820 1060 1285 5.9E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 487 885 3.0E-117 T 14-10-2018 IPR010071 Amino acid adenylation domain TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:3.30.559.10 5 203 6.8E-25 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 SUPERFAMILY SSF53474 1061 1280 5.72E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 Pfam PF00550 Phosphopantetheine attachment site 968 1030 6.8E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 SUPERFAMILY SSF56801 458 977 1.11E-135 T 14-10-2018 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:3.30.559.30 214 430 1.7E-28 T 14-10-2018 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 Pfam PF00501 AMP-binding enzyme 468 860 1.6E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 SUPERFAMILY SSF52777 188 419 8.89E-30 T 14-10-2018 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 ProSitePatterns PS00455 Putative AMP-binding domain signature. 603 614 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 SUPERFAMILY SSF47336 959 1031 3.27E-12 T 14-10-2018 IPR036736 ACP-like superfamily TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:1.10.1200.10 957 1041 2.2E-19 T 14-10-2018 IPR036736 ACP-like superfamily TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 Pfam PF00975 Thioesterase domain 1068 1271 1.7E-17 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 TMO_0595 163b05adf227d1b260d8966459cc51d1 1289 Pfam PF13193 AMP-binding enzyme C-terminal domain 869 940 1.9E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_3102 94a3aaab8920c43eb677282b86e38d78 189 SUPERFAMILY SSF88723 43 173 2.62E-12 T 14-10-2018 IPR029060 PIN-like domain superfamily TMO_3102 94a3aaab8920c43eb677282b86e38d78 189 Gene3D G3DSA:3.40.50.1010 41 177 2.4E-13 T 14-10-2018 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 399 417 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 146 164 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 SUPERFAMILY SSF51120 3 96 2.22E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 PRINTS PR00313 NodO calcium binding signature 286 294 1.0E-10 T 14-10-2018 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 PRINTS PR00313 NodO calcium binding signature 295 304 1.0E-10 T 14-10-2018 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 PRINTS PR00313 NodO calcium binding signature 265 276 1.0E-10 T 14-10-2018 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 PRINTS PR00313 NodO calcium binding signature 277 285 1.0E-10 T 14-10-2018 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 525 543 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 SUPERFAMILY SSF51120 311 462 8.89E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Gene3D G3DSA:2.150.10.10 1 122 7.0E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 20 38 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Gene3D G3DSA:2.150.10.10 366 435 1.2E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 SUPERFAMILY SSF51120 51 239 2.09E-20 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Gene3D G3DSA:2.150.10.10 457 645 4.1E-33 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Gene3D G3DSA:2.150.10.10 123 247 1.6E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Gene3D G3DSA:2.150.10.10 248 358 3.1E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 285 302 0.0044 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 140 157 0.019 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 432 448 0.061 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 159 175 0.0061 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 393 410 8.9E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 411 428 0.0082 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 519 536 0.0013 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 33 49 0.15 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 179 194 4.5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 53 69 0.35 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 306 322 18.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 15 31 1.5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 268 284 0.032 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 273 291 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 282 300 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 SUPERFAMILY SSF51120 166 331 4.97E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_2362 93173efd5e28cbd1f7f0ab50d8e8267e 646 SUPERFAMILY SSF51120 423 637 1.44E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_c0592 17b4ebe1b4da8e31a13fa2b9cb079547 577 Gene3D G3DSA:1.20.1530.20 7 399 5.1E-82 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily TMO_c0592 17b4ebe1b4da8e31a13fa2b9cb079547 577 SUPERFAMILY SSF51735 420 554 9.97E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0592 17b4ebe1b4da8e31a13fa2b9cb079547 577 Pfam PF00999 Sodium/hydrogen exchanger family 11 387 1.5E-78 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TMO_c0592 17b4ebe1b4da8e31a13fa2b9cb079547 577 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 17 297 2.4E-71 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 TMO_c0592 17b4ebe1b4da8e31a13fa2b9cb079547 577 Pfam PF02254 TrkA-N domain 424 535 3.2E-19 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TMO_c0592 17b4ebe1b4da8e31a13fa2b9cb079547 577 Gene3D G3DSA:3.40.50.720 416 551 1.2E-24 T 14-10-2018 TMO_b0223 a25c648471b328ff11a37b2770deb800 246 Pfam PF00072 Response regulator receiver domain 16 125 1.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0223 a25c648471b328ff11a37b2770deb800 246 SMART SM00862 163 239 1.6E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_b0223 a25c648471b328ff11a37b2770deb800 246 SUPERFAMILY SSF52172 14 144 2.99E-39 T 14-10-2018 IPR011006 CheY-like superfamily TMO_b0223 a25c648471b328ff11a37b2770deb800 246 SMART SM00448 14 124 1.7E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0223 a25c648471b328ff11a37b2770deb800 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 239 3.5E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_b0223 a25c648471b328ff11a37b2770deb800 246 Gene3D G3DSA:3.40.50.2300 3 130 1.6E-34 T 14-10-2018 TMO_b0223 a25c648471b328ff11a37b2770deb800 246 SUPERFAMILY SSF46894 142 240 1.16E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_b0223 a25c648471b328ff11a37b2770deb800 246 Gene3D G3DSA:1.10.10.10 131 244 1.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0150 63c1db75be877d1edb288a07e0be3437 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 608 6.5E-249 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_b0150 63c1db75be877d1edb288a07e0be3437 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_b0150 63c1db75be877d1edb288a07e0be3437 613 Pfam PF00920 Dehydratase family 34 605 2.4E-219 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_b0150 63c1db75be877d1edb288a07e0be3437 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 608 44.898 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_b0150 63c1db75be877d1edb288a07e0be3437 613 SUPERFAMILY SSF52016 421 608 9.42E-59 T 14-10-2018 TMO_b0150 63c1db75be877d1edb288a07e0be3437 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_b0150 63c1db75be877d1edb288a07e0be3437 613 Gene3D G3DSA:3.50.30.80 421 573 4.3E-53 T 14-10-2018 TMO_b0150 63c1db75be877d1edb288a07e0be3437 613 SUPERFAMILY SSF143975 4 420 5.23E-135 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_1468 1e829c37bfb670e753d620ad5108b459 222 SUPERFAMILY SSF48695 39 186 1.5E-44 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily TMO_1468 1e829c37bfb670e753d620ad5108b459 222 Gene3D G3DSA:3.90.10.10 40 107 1.9E-7 T 14-10-2018 TMO_1468 1e829c37bfb670e753d620ad5108b459 222 Pfam PF14522 Cytochrome c7 and related cytochrome c 126 221 3.9E-6 T 14-10-2018 IPR029467 C-type polyheme cytochrome OmcB TMO_0981 eb08824e00836359396c1d37a281e012 319 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 245 9.5E-31 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_0981 eb08824e00836359396c1d37a281e012 319 PIRSF PIRSF016184 1 287 5.6E-47 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_0981 eb08824e00836359396c1d37a281e012 319 SUPERFAMILY SSF54506 4 286 2.09E-64 T 14-10-2018 TMO_0981 eb08824e00836359396c1d37a281e012 319 Gene3D G3DSA:3.10.310.10 133 275 3.9E-71 T 14-10-2018 TMO_0981 eb08824e00836359396c1d37a281e012 319 Gene3D G3DSA:3.10.310.10 7 278 3.9E-71 T 14-10-2018 TMO_0981 eb08824e00836359396c1d37a281e012 319 Pfam PF02567 Phenazine biosynthesis-like protein 9 247 8.2E-46 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_c0434 9384273e322b630de18bd67215282895 304 Gene3D G3DSA:3.40.50.720 1 304 9.7E-77 T 14-10-2018 TMO_c0434 9384273e322b630de18bd67215282895 304 Pfam PF00106 short chain dehydrogenase 16 215 1.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0434 9384273e322b630de18bd67215282895 304 SUPERFAMILY SSF51735 13 255 5.11E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0434 9384273e322b630de18bd67215282895 304 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 194 2.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0434 9384273e322b630de18bd67215282895 304 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 2.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0434 9384273e322b630de18bd67215282895 304 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0434 9384273e322b630de18bd67215282895 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 5.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0434 9384273e322b630de18bd67215282895 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 5.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0434 9384273e322b630de18bd67215282895 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 5.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0434 9384273e322b630de18bd67215282895 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 5.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 Pfam PF00355 Rieske [2Fe-2S] domain 33 118 9.1E-17 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 69 89 3.1E-31 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 90 110 3.1E-31 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 177 199 3.1E-31 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 17 42 3.1E-31 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 48 63 3.1E-31 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 138 164 3.1E-31 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 Gene3D G3DSA:3.90.380.10 8 400 8.1E-92 T 14-10-2018 TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 SUPERFAMILY SSF50022 6 154 1.83E-44 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 SUPERFAMILY SSF55961 167 400 1.02E-44 T 14-10-2018 TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 Gene3D G3DSA:2.102.10.10 33 162 8.1E-92 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_a0554 7da4ffa399fd2494ad1478ffed663283 402 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 186 400 2.5E-21 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 TMO_1832 678a344cbf5160103249cf6ca2575d4b 90 TIGRFAM TIGR03793 TOMM_pelo: NHLP leader peptide domain 4 79 2.1E-19 T 14-10-2018 IPR022513 Thiazole/oxazole-modified microcins TMO_1832 678a344cbf5160103249cf6ca2575d4b 90 SUPERFAMILY SSF56209 4 82 1.12E-15 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_1832 678a344cbf5160103249cf6ca2575d4b 90 Gene3D G3DSA:3.90.330.10 16 81 9.6E-7 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0240 8e8afc157b697a593027e7add53436f9 557 Gene3D G3DSA:3.30.300.310 436 544 8.9E-25 T 14-10-2018 TMO_b0240 8e8afc157b697a593027e7add53436f9 557 Pfam PF00501 AMP-binding enzyme 35 439 4.9E-78 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0240 8e8afc157b697a593027e7add53436f9 557 Gene3D G3DSA:3.40.50.12780 16 435 4.1E-96 T 14-10-2018 TMO_b0240 8e8afc157b697a593027e7add53436f9 557 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 531 1.3E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0240 8e8afc157b697a593027e7add53436f9 557 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0240 8e8afc157b697a593027e7add53436f9 557 SUPERFAMILY SSF56801 22 544 1.09E-129 T 14-10-2018 TMO_c0936 f2365ef4342bde00490813ba1d38b3a3 501 SUPERFAMILY SSF56059 285 487 4.12E-35 T 14-10-2018 TMO_c0936 f2365ef4342bde00490813ba1d38b3a3 501 Gene3D G3DSA:3.40.50.20 228 309 1.8E-5 T 14-10-2018 TMO_c0936 f2365ef4342bde00490813ba1d38b3a3 501 Pfam PF08443 RimK-like ATP-grasp domain 295 468 1.7E-5 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 TMO_c0936 f2365ef4342bde00490813ba1d38b3a3 501 Gene3D G3DSA:3.30.1490.20 311 373 2.5E-5 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_c0936 f2365ef4342bde00490813ba1d38b3a3 501 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 29 185 1.7E-34 T 14-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain TMO_c0936 f2365ef4342bde00490813ba1d38b3a3 501 Gene3D G3DSA:3.30.470.20 374 487 9.3E-16 T 14-10-2018 TMO_a0410 20fc930fc51e0c5bb85511a19251f4a0 448 Gene3D G3DSA:1.10.4100.10 34 418 1.1E-83 T 14-10-2018 TMO_a0410 20fc930fc51e0c5bb85511a19251f4a0 448 Gene3D G3DSA:3.30.1330.120 271 401 1.1E-83 T 14-10-2018 TMO_a0410 20fc930fc51e0c5bb85511a19251f4a0 448 Pfam PF03972 MmgE/PrpD family 17 436 1.8E-95 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 TMO_a0410 20fc930fc51e0c5bb85511a19251f4a0 448 SUPERFAMILY SSF103378 13 446 1.27E-93 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 TMO_1970 0468028dd59d9005d96a6fa99d73490d 162 SUPERFAMILY SSF54862 36 146 2.18E-27 T 14-10-2018 TMO_1970 0468028dd59d9005d96a6fa99d73490d 162 Gene3D G3DSA:3.30.70.3270 36 160 3.7E-42 T 14-10-2018 TMO_1970 0468028dd59d9005d96a6fa99d73490d 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 146 28.998 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1970 0468028dd59d9005d96a6fa99d73490d 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 1.2E-51 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1970 0468028dd59d9005d96a6fa99d73490d 162 Pfam PF12838 4Fe-4S dicluster domain 62 116 4.3E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_1970 0468028dd59d9005d96a6fa99d73490d 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_d0027 c71c981d7704765ee940ffe660026218 281 Pfam PF00455 DeoR C terminal sensor domain 98 261 2.9E-44 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain TMO_d0027 c71c981d7704765ee940ffe660026218 281 Pfam PF08220 DeoR-like helix-turn-helix domain 30 84 1.1E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_d0027 c71c981d7704765ee940ffe660026218 281 SMART SM00420 30 82 1.1E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_d0027 c71c981d7704765ee940ffe660026218 281 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 48 62 6.2E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_d0027 c71c981d7704765ee940ffe660026218 281 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 62 80 6.2E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_d0027 c71c981d7704765ee940ffe660026218 281 SMART SM01134 96 262 4.1E-59 T 14-10-2018 TMO_d0027 c71c981d7704765ee940ffe660026218 281 SUPERFAMILY SSF46785 27 92 8.95E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_d0027 c71c981d7704765ee940ffe660026218 281 SUPERFAMILY SSF100950 98 262 3.26E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_d0027 c71c981d7704765ee940ffe660026218 281 Gene3D G3DSA:3.30.750.70 93 157 8.0E-6 T 14-10-2018 TMO_d0027 c71c981d7704765ee940ffe660026218 281 Gene3D G3DSA:1.10.10.10 20 75 4.8E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 SUPERFAMILY SSF47917 383 507 1.33E-23 T 14-10-2018 TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 365 374 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 159 374 1.4E-62 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 Gene3D G3DSA:2.40.30.20 23 103 1.4E-14 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 37 102 2.3E-5 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 511 38.171 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 381 505 4.0E-24 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 32 507 7.3E-166 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 Gene3D G3DSA:1.20.150.20 383 512 4.5E-24 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 SUPERFAMILY SSF52540 106 379 2.53E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 Gene3D G3DSA:3.40.50.300 104 381 7.3E-109 T 14-10-2018 TMO_1656 e1cc45393dd143f78abe9953b5de644c 520 SUPERFAMILY SSF50615 26 104 1.18E-14 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_a0414 50323da1a7fe4d53a993331a6e4a91c4 477 SUPERFAMILY SSF75304 6 462 9.16E-122 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_a0414 50323da1a7fe4d53a993331a6e4a91c4 477 Pfam PF01425 Amidase 34 455 2.3E-91 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_a0414 50323da1a7fe4d53a993331a6e4a91c4 477 Gene3D G3DSA:3.90.1300.10 9 471 5.6E-128 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_3496 cf8cabe03966257c961642e68592f1ff 322 Gene3D G3DSA:3.40.50.1820 1 321 8.6E-100 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3496 cf8cabe03966257c961642e68592f1ff 322 SUPERFAMILY SSF53474 42 320 5.79E-79 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3496 cf8cabe03966257c961642e68592f1ff 322 Pfam PF07859 alpha/beta hydrolase fold 90 296 8.7E-75 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 TMO_1263 bc960cec628a2067d74631c9b1e46058 72 Pfam PF11127 Protein of unknown function (DUF2892) 7 68 1.5E-22 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 TMO_2965 fe5656b9c8d1eb8766354475bcb8de90 102 SUPERFAMILY SSF141091 1 100 3.14E-33 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2965 fe5656b9c8d1eb8766354475bcb8de90 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 4.8E-30 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2965 fe5656b9c8d1eb8766354475bcb8de90 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 4.0E-36 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2965 fe5656b9c8d1eb8766354475bcb8de90 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 23.872 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1834 94f6cdd18723a68f1c52d4c93b14ce32 422 Pfam PF00570 HRDC domain 210 277 1.2E-16 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TMO_1834 94f6cdd18723a68f1c52d4c93b14ce32 422 Gene3D G3DSA:3.30.420.10 1 189 4.1E-62 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_1834 94f6cdd18723a68f1c52d4c93b14ce32 422 TIGRFAM TIGR01388 rnd: ribonuclease D 1 365 6.1E-124 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 TMO_1834 94f6cdd18723a68f1c52d4c93b14ce32 422 SUPERFAMILY SSF53098 1 201 2.71E-62 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_1834 94f6cdd18723a68f1c52d4c93b14ce32 422 SUPERFAMILY SSF47819 297 366 1.57E-13 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 TMO_1834 94f6cdd18723a68f1c52d4c93b14ce32 422 Gene3D G3DSA:1.10.150.80 192 291 3.1E-19 T 14-10-2018 TMO_1834 94f6cdd18723a68f1c52d4c93b14ce32 422 SUPERFAMILY SSF47819 193 290 1.55E-20 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 TMO_1834 94f6cdd18723a68f1c52d4c93b14ce32 422 SMART SM00341 206 286 2.0E-11 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TMO_1834 94f6cdd18723a68f1c52d4c93b14ce32 422 SMART SM00474 1 168 2.5E-35 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_1834 94f6cdd18723a68f1c52d4c93b14ce32 422 Pfam PF01612 3'-5' exonuclease 1 168 2.3E-37 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_1834 94f6cdd18723a68f1c52d4c93b14ce32 422 Hamap MF_01899 Ribonuclease D [rnd]. 1 364 43.357 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 SUPERFAMILY SSF81301 182 390 2.62E-59 T 14-10-2018 TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 SUPERFAMILY SSF109604 6 192 4.08E-69 T 14-10-2018 TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 Pfam PF04607 Region found in RelA / SpoT proteins 236 345 6.4E-37 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 Pfam PF13328 HD domain 26 176 5.4E-50 T 14-10-2018 IPR003607 HD/PDEase domain TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 Gene3D G3DSA:3.10.20.30 380 452 5.1E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 SMART SM00954 236 346 1.8E-65 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 Gene3D G3DSA:1.10.3210.10 2 191 1.2E-76 T 14-10-2018 TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 Pfam PF13291 ACT domain 640 715 7.3E-18 T 14-10-2018 IPR002912 ACT domain TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 Gene3D G3DSA:3.30.70.260 641 717 1.9E-11 T 14-10-2018 TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 SUPERFAMILY SSF81271 373 446 1.44E-22 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 SUPERFAMILY SSF55021 643 713 4.58E-8 T 14-10-2018 TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 Gene3D G3DSA:3.30.460.10 196 326 4.6E-44 T 14-10-2018 TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 SMART SM00471 41 153 3.8E-9 T 14-10-2018 IPR003607 HD/PDEase domain TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 710 3.5E-220 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 TMO_1591 a1875c0e9f700b235cccfbdfe78bacc1 718 Pfam PF02824 TGS domain 387 445 1.4E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 TMO_0496 c095afd5e5c8953a41daf3cbdaa52b2b 254 SUPERFAMILY SSF52540 10 248 5.67E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0496 c095afd5e5c8953a41daf3cbdaa52b2b 254 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 10 250 4.1E-96 T 14-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD TMO_0496 c095afd5e5c8953a41daf3cbdaa52b2b 254 SMART SM00382 35 227 1.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0496 c095afd5e5c8953a41daf3cbdaa52b2b 254 Gene3D G3DSA:3.40.50.300 7 251 1.6E-52 T 14-10-2018 TMO_0496 c095afd5e5c8953a41daf3cbdaa52b2b 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 249 2.4E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_0496 c095afd5e5c8953a41daf3cbdaa52b2b 254 Pfam PF00005 ABC transporter 27 180 4.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2418 fecca24f5179ad36c52425cb39c2cc87 650 PIRSF PIRSF001589 6 368 1.3E-39 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_2418 fecca24f5179ad36c52425cb39c2cc87 650 PIRSF PIRSF001589 447 636 8.5E-5 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_2418 fecca24f5179ad36c52425cb39c2cc87 650 Gene3D G3DSA:3.60.20.10 28 222 1.5E-27 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_2418 fecca24f5179ad36c52425cb39c2cc87 650 SUPERFAMILY SSF56235 35 221 9.65E-29 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_2418 fecca24f5179ad36c52425cb39c2cc87 650 Pfam PF00733 Asparagine synthase 240 625 4.4E-23 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_2418 fecca24f5179ad36c52425cb39c2cc87 650 Pfam PF13537 Glutamine amidotransferase domain 58 164 9.1E-18 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TMO_2418 fecca24f5179ad36c52425cb39c2cc87 650 SUPERFAMILY SSF52402 218 615 5.23E-25 T 14-10-2018 TMO_0752 fc84f46e09af7268a91e36f137393057 393 Gene3D G3DSA:3.60.60.10 122 386 1.7E-45 T 14-10-2018 TMO_0752 fc84f46e09af7268a91e36f137393057 393 Gene3D G3DSA:1.10.10.2120 63 115 3.1E-5 T 14-10-2018 TMO_0752 fc84f46e09af7268a91e36f137393057 393 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 151 374 6.4E-15 T 14-10-2018 IPR005079 Peptidase C45 TMO_1800 f930f9e8c0a37097470c839793e5ee78 288 Pfam PF13468 Glyoxalase-like domain 10 183 4.9E-17 T 14-10-2018 IPR025870 Glyoxalase-like domain TMO_1800 f930f9e8c0a37097470c839793e5ee78 288 SUPERFAMILY SSF54593 4 267 2.86E-7 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_c0314 4624b249de531015d5745ec19016a0d4 585 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 408 553 1.2E-25 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_c0314 4624b249de531015d5745ec19016a0d4 585 SUPERFAMILY SSF52467 202 359 1.43E-34 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_c0314 4624b249de531015d5745ec19016a0d4 585 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 438 457 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TMO_c0314 4624b249de531015d5745ec19016a0d4 585 Gene3D G3DSA:3.40.50.970 373 573 5.7E-45 T 14-10-2018 TMO_c0314 4624b249de531015d5745ec19016a0d4 585 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 26 189 7.7E-41 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TMO_c0314 4624b249de531015d5745ec19016a0d4 585 Gene3D G3DSA:3.40.50.970 15 195 5.3E-46 T 14-10-2018 TMO_c0314 4624b249de531015d5745ec19016a0d4 585 Gene3D G3DSA:3.40.50.1220 200 371 4.7E-38 T 14-10-2018 TMO_c0314 4624b249de531015d5745ec19016a0d4 585 SUPERFAMILY SSF52518 377 571 1.34E-39 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_c0314 4624b249de531015d5745ec19016a0d4 585 SUPERFAMILY SSF52518 26 191 5.4E-36 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_c0314 4624b249de531015d5745ec19016a0d4 585 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 210 339 1.6E-25 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TMO_a0381 f3d24e887f26c7794becf9310fbf29a5 234 SUPERFAMILY SSF54593 43 178 6.85E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_a0381 f3d24e887f26c7794becf9310fbf29a5 234 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 46 177 1.3E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_a0381 f3d24e887f26c7794becf9310fbf29a5 234 Gene3D G3DSA:3.10.180.10 42 211 9.6E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_2301 75fbe77cf499b64f7abefcbf885022f9 464 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 448 1.8E-223 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 TMO_2301 75fbe77cf499b64f7abefcbf885022f9 464 Pfam PF01474 Class-II DAHP synthetase family 5 442 1.7E-208 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 TMO_2301 75fbe77cf499b64f7abefcbf885022f9 464 Gene3D G3DSA:3.20.20.70 188 447 2.6E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2301 75fbe77cf499b64f7abefcbf885022f9 464 SUPERFAMILY SSF51569 3 446 3.17E-205 T 14-10-2018 TMO_0055 0e8252ecf363870c9477d3bd9a83aea9 409 Gene3D G3DSA:3.40.50.300 27 165 8.7E-9 T 14-10-2018 TMO_0055 0e8252ecf363870c9477d3bd9a83aea9 409 Gene3D G3DSA:3.30.420.280 182 374 6.8E-8 T 14-10-2018 TMO_1648 9ad45fbac183b4d043c9df1168682040 418 PRINTS PR00415 Aconitase family signature 203 216 5.1E-5 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_1648 9ad45fbac183b4d043c9df1168682040 418 PRINTS PR00415 Aconitase family signature 128 143 5.1E-5 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_1648 9ad45fbac183b4d043c9df1168682040 418 PRINTS PR00415 Aconitase family signature 114 127 5.1E-5 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_1648 9ad45fbac183b4d043c9df1168682040 418 PRINTS PR00415 Aconitase family signature 351 364 5.1E-5 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_1648 9ad45fbac183b4d043c9df1168682040 418 Gene3D G3DSA:3.30.499.10 272 418 4.8E-43 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TMO_1648 9ad45fbac183b4d043c9df1168682040 418 SUPERFAMILY SSF53732 1 417 2.22E-95 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TMO_1648 9ad45fbac183b4d043c9df1168682040 418 Gene3D G3DSA:3.30.499.20 4 269 2.3E-68 T 14-10-2018 TMO_1648 9ad45fbac183b4d043c9df1168682040 418 Pfam PF00330 Aconitase family (aconitate hydratase) 79 409 7.6E-60 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_c0664 c5d53a793fe07c047ddcfc2406ce6abd 100 Pfam PF13560 Helix-turn-helix domain 7 65 2.6E-12 T 14-10-2018 TMO_c0664 c5d53a793fe07c047ddcfc2406ce6abd 100 Gene3D G3DSA:1.10.260.40 2 64 7.0E-15 T 14-10-2018 TMO_c0664 c5d53a793fe07c047ddcfc2406ce6abd 100 SUPERFAMILY SSF47413 5 62 3.38E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_c0664 c5d53a793fe07c047ddcfc2406ce6abd 100 SMART SM00530 10 65 1.1E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_3221 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 200 281 2.3E-27 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 PIRSF PIRSF002111 2 400 2.4E-170 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_3221 3a804c5e687d4e419f238758b5062536 574 PIRSF PIRSF002111 377 553 1.0E-41 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_3221 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 446 546 7.38E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_3221 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 118 198 5.72E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_3221 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 22 112 5.2E-17 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 113 196 1.2E-5 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 288 360 9.7E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 TMO_3221 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 462 533 9.0E-14 T 14-10-2018 IPR022967 RNA-binding domain, S1 TMO_3221 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 32 100 9.0E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 TMO_3221 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 116 184 3.2E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 TMO_3221 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 203 273 2.3E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 TMO_3221 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 375 447 1.3E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 TMO_3221 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 303 322 4.7E-82 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 343 361 4.7E-82 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 139 156 4.7E-82 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 168 188 4.7E-82 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 52 66 4.7E-82 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 97 116 4.7E-82 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 121 137 4.7E-82 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 34 52 4.7E-82 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 225 246 4.7E-82 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 371 457 1.8E-24 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 282 370 6.6E-28 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 202 289 8.95E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_3221 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 355 453 9.7E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_3221 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 458 541 4.4E-16 T 14-10-2018 TMO_3221 3a804c5e687d4e419f238758b5062536 574 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 16 533 1.4E-195 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_3221 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 117 184 6.4E-10 T 14-10-2018 IPR003029 S1 domain GO:0003676 TMO_3221 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 203 273 2.2E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 TMO_3221 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 374 447 2.6E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 TMO_3221 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 33 99 4.7E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 TMO_3221 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 463 533 7.5E-11 T 14-10-2018 IPR003029 S1 domain GO:0003676 TMO_3221 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 288 360 1.6E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 TMO_3221 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 268 382 1.34E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_3221 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 20 125 1.96E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_3347 9851c7bdcd1c34f12be1e9f3e3d6bc90 467 Gene3D G3DSA:3.90.76.10 7 152 1.6E-116 T 14-10-2018 TMO_3347 9851c7bdcd1c34f12be1e9f3e3d6bc90 467 Gene3D G3DSA:3.10.105.10 229 439 1.6E-116 T 14-10-2018 TMO_3347 9851c7bdcd1c34f12be1e9f3e3d6bc90 467 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 41 371 7.7E-88 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_3347 9851c7bdcd1c34f12be1e9f3e3d6bc90 467 PIRSF PIRSF002741 1 467 1.7E-97 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_3347 9851c7bdcd1c34f12be1e9f3e3d6bc90 467 Gene3D G3DSA:3.40.190.10 153 449 1.6E-116 T 14-10-2018 TMO_3347 9851c7bdcd1c34f12be1e9f3e3d6bc90 467 SUPERFAMILY SSF53850 1 465 1.59E-124 T 14-10-2018 TMO_a0445 fc63bedb020bb9baa5fcdecfdf9f016c 250 SMART SM00346 8 98 1.2E-7 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_a0445 fc63bedb020bb9baa5fcdecfdf9f016c 250 SUPERFAMILY SSF55781 91 243 5.36E-27 T 14-10-2018 TMO_a0445 fc63bedb020bb9baa5fcdecfdf9f016c 250 Gene3D G3DSA:3.30.450.40 82 248 3.9E-51 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_a0445 fc63bedb020bb9baa5fcdecfdf9f016c 250 Pfam PF09339 IclR helix-turn-helix domain 11 60 7.6E-15 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_a0445 fc63bedb020bb9baa5fcdecfdf9f016c 250 SUPERFAMILY SSF46785 8 80 2.19E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0445 fc63bedb020bb9baa5fcdecfdf9f016c 250 Gene3D G3DSA:1.10.10.10 6 81 9.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0445 fc63bedb020bb9baa5fcdecfdf9f016c 250 Pfam PF01614 Bacterial transcriptional regulator 125 234 3.4E-9 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_3238 5d2a30837c6742edcdcf65ea5649d769 296 SUPERFAMILY SSF53474 12 289 3.38E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3238 5d2a30837c6742edcdcf65ea5649d769 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 235 249 5.7E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3238 5d2a30837c6742edcdcf65ea5649d769 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 126 139 5.7E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3238 5d2a30837c6742edcdcf65ea5649d769 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 5.7E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3238 5d2a30837c6742edcdcf65ea5649d769 296 Pfam PF00561 alpha/beta hydrolase fold 31 273 7.0E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3238 5d2a30837c6742edcdcf65ea5649d769 296 Gene3D G3DSA:3.40.50.1820 17 292 9.9E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0843 363aaa8daf1a46b243dadf4c046754f6 214 Gene3D G3DSA:3.40.109.10 1 190 1.1E-45 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TMO_c0843 363aaa8daf1a46b243dadf4c046754f6 214 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 8 207 6.8E-77 T 14-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 TMO_c0843 363aaa8daf1a46b243dadf4c046754f6 214 SUPERFAMILY SSF55469 16 206 3.01E-44 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TMO_c0843 363aaa8daf1a46b243dadf4c046754f6 214 Pfam PF00881 Nitroreductase family 20 185 9.8E-28 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TMO_2708 2287fc78b881a54aa8a711617a19ad7d 558 SUPERFAMILY SSF141868 315 543 5.1E-64 T 14-10-2018 IPR035919 EAL domain superfamily TMO_2708 2287fc78b881a54aa8a711617a19ad7d 558 SMART SM00052 306 548 1.3E-58 T 14-10-2018 IPR001633 EAL domain TMO_2708 2287fc78b881a54aa8a711617a19ad7d 558 Gene3D G3DSA:3.30.450.20 14 105 9.0E-6 T 14-10-2018 TMO_2708 2287fc78b881a54aa8a711617a19ad7d 558 SUPERFAMILY SSF55785 13 123 2.37E-6 T 14-10-2018 IPR035965 PAS domain superfamily TMO_2708 2287fc78b881a54aa8a711617a19ad7d 558 Pfam PF00563 EAL domain 314 543 3.7E-59 T 14-10-2018 IPR001633 EAL domain TMO_2708 2287fc78b881a54aa8a711617a19ad7d 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 245 2.8E-5 T 14-10-2018 IPR000160 GGDEF domain TMO_2708 2287fc78b881a54aa8a711617a19ad7d 558 Gene3D G3DSA:3.30.70.270 141 292 3.1E-5 T 14-10-2018 TMO_2708 2287fc78b881a54aa8a711617a19ad7d 558 Gene3D G3DSA:3.20.20.450 309 557 6.7E-71 T 14-10-2018 IPR035919 EAL domain superfamily TMO_2448 c0ea872bcc5b433062d356630f53df07 312 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 44 262 1.9E-61 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TMO_2448 c0ea872bcc5b433062d356630f53df07 312 SUPERFAMILY SSF69796 37 271 2.09E-65 T 14-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TMO_2448 c0ea872bcc5b433062d356630f53df07 312 Pfam PF02511 Thymidylate synthase complementing protein 46 256 7.0E-54 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TMO_2448 c0ea872bcc5b433062d356630f53df07 312 Gene3D G3DSA:3.30.1360.170 28 277 4.6E-71 T 14-10-2018 TMO_2448 c0ea872bcc5b433062d356630f53df07 312 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 40 270 28.072 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TMO_c0368 7d023cfb9f80765b6403b76c350115d5 582 Pfam PF13193 AMP-binding enzyme C-terminal domain 487 564 8.1E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0368 7d023cfb9f80765b6403b76c350115d5 582 ProSitePatterns PS00455 Putative AMP-binding domain signature. 229 240 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0368 7d023cfb9f80765b6403b76c350115d5 582 Pfam PF00501 AMP-binding enzyme 53 478 5.9E-101 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0368 7d023cfb9f80765b6403b76c350115d5 582 SUPERFAMILY SSF56801 43 575 2.22E-147 T 14-10-2018 TMO_c0368 7d023cfb9f80765b6403b76c350115d5 582 Gene3D G3DSA:3.40.50.12780 39 471 3.3E-111 T 14-10-2018 TMO_c0368 7d023cfb9f80765b6403b76c350115d5 582 Gene3D G3DSA:3.30.300.30 472 576 8.2E-26 T 14-10-2018 TMO_3222 491d7dfc2efb915bebf307617c08267a 191 Gene3D G3DSA:1.10.3210.10 8 189 3.1E-55 T 14-10-2018 TMO_3222 491d7dfc2efb915bebf307617c08267a 191 Pfam PF01966 HD domain 37 73 2.6E-5 T 14-10-2018 IPR006674 HD domain TMO_3222 491d7dfc2efb915bebf307617c08267a 191 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 14 186 2.9E-65 T 14-10-2018 IPR017670 Phosphonate degradation operon associated HDIG domain protein TMO_3222 491d7dfc2efb915bebf307617c08267a 191 SUPERFAMILY SSF109604 26 70 2.03E-7 T 14-10-2018 TMO_a0581 acfb933427827f2b8882eed5841f1643 633 Gene3D G3DSA:3.60.20.10 10 201 2.0E-29 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_a0581 acfb933427827f2b8882eed5841f1643 633 SUPERFAMILY SSF56235 21 199 1.2E-31 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_a0581 acfb933427827f2b8882eed5841f1643 633 Pfam PF13537 Glutamine amidotransferase domain 37 141 7.0E-20 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TMO_a0581 acfb933427827f2b8882eed5841f1643 633 Pfam PF00733 Asparagine synthase 219 596 1.3E-27 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_a0581 acfb933427827f2b8882eed5841f1643 633 PIRSF PIRSF001589 8 348 3.3E-47 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_a0581 acfb933427827f2b8882eed5841f1643 633 PIRSF PIRSF001589 482 632 9.1E-8 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_a0581 acfb933427827f2b8882eed5841f1643 633 SUPERFAMILY SSF52402 210 559 1.45E-27 T 14-10-2018 TMO_2491 ba86fc4c80a7e9ffc669771d93b67864 228 SUPERFAMILY SSF46689 43 95 3.41E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2491 ba86fc4c80a7e9ffc669771d93b67864 228 Gene3D G3DSA:1.10.357.10 31 217 1.5E-11 T 14-10-2018 TMO_a0503 da64ce8115a0b575ca3959f0932afdbe 271 Gene3D G3DSA:3.90.226.10 4 210 1.3E-55 T 14-10-2018 TMO_a0503 da64ce8115a0b575ca3959f0932afdbe 271 SUPERFAMILY SSF52096 11 268 7.26E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0503 da64ce8115a0b575ca3959f0932afdbe 271 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 111 131 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_a0503 da64ce8115a0b575ca3959f0932afdbe 271 Gene3D G3DSA:1.10.12.10 215 268 4.5E-15 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_a0503 da64ce8115a0b575ca3959f0932afdbe 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 267 2.8E-51 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_3510 d2ddcbb947324bcecf898fefcea6b1a3 232 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.0E-107 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 TMO_3510 d2ddcbb947324bcecf898fefcea6b1a3 232 Gene3D G3DSA:1.10.10.10 128 228 2.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3510 d2ddcbb947324bcecf898fefcea6b1a3 232 Gene3D G3DSA:3.40.50.2300 1 127 9.2E-42 T 14-10-2018 TMO_3510 d2ddcbb947324bcecf898fefcea6b1a3 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.1E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_3510 d2ddcbb947324bcecf898fefcea6b1a3 232 SMART SM00448 3 116 7.8E-47 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_3510 d2ddcbb947324bcecf898fefcea6b1a3 232 SUPERFAMILY SSF46894 126 226 1.7E-32 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_3510 d2ddcbb947324bcecf898fefcea6b1a3 232 SMART SM00862 150 225 6.4E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_3510 d2ddcbb947324bcecf898fefcea6b1a3 232 Pfam PF00072 Response regulator receiver domain 5 117 4.7E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_3510 d2ddcbb947324bcecf898fefcea6b1a3 232 SUPERFAMILY SSF52172 2 129 1.57E-45 T 14-10-2018 IPR011006 CheY-like superfamily TMO_c0687 e2a064a24739b550a52d571211c5d2ed 296 SUPERFAMILY SSF47240 90 237 1.89E-16 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_c0687 e2a064a24739b550a52d571211c5d2ed 296 Pfam PF04305 Protein of unknown function (DUF455) 16 279 5.4E-93 T 14-10-2018 IPR007402 Protein of unknown function DUF455 TMO_c0687 e2a064a24739b550a52d571211c5d2ed 296 PIRSF PIRSF012318 1 292 2.3E-85 T 14-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 TMO_2601 c5713b57ce58f8a3a17b4030ced07784 245 Gene3D G3DSA:3.30.2180.30 2 73 1.5E-22 T 14-10-2018 TMO_2601 c5713b57ce58f8a3a17b4030ced07784 245 Pfam PF07542 ATP12 chaperone protein 9 133 3.5E-36 T 14-10-2018 IPR011419 ATP12, ATP synthase F1-assembly protein GO:0043461 TMO_2601 c5713b57ce58f8a3a17b4030ced07784 245 SUPERFAMILY SSF160909 7 230 4.84E-73 T 14-10-2018 TMO_2601 c5713b57ce58f8a3a17b4030ced07784 245 Gene3D G3DSA:1.10.3580.10 74 244 6.4E-57 T 14-10-2018 IPR023335 ATP12 orthogonal Bundle domain superfamily TMO_b0537 d15b1ad726e741d072deeb43c7eb99f4 302 Pfam PF12833 Helix-turn-helix domain 212 289 1.1E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0537 d15b1ad726e741d072deeb43c7eb99f4 302 SMART SM00342 206 288 8.6E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0537 d15b1ad726e741d072deeb43c7eb99f4 302 SUPERFAMILY SSF46689 243 290 1.25E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0537 d15b1ad726e741d072deeb43c7eb99f4 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 243 284 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_b0537 d15b1ad726e741d072deeb43c7eb99f4 302 Gene3D G3DSA:1.10.10.60 190 248 3.0E-13 T 14-10-2018 TMO_b0537 d15b1ad726e741d072deeb43c7eb99f4 302 SUPERFAMILY SSF46689 190 239 1.34E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0537 d15b1ad726e741d072deeb43c7eb99f4 302 Gene3D G3DSA:1.10.10.60 249 292 2.6E-15 T 14-10-2018 TMO_1640 48448c1ebe8dddbafc6ad72257b38811 293 SUPERFAMILY SSF55781 121 292 2.75E-37 T 14-10-2018 TMO_1640 48448c1ebe8dddbafc6ad72257b38811 293 Gene3D G3DSA:3.30.450.40 121 293 1.5E-41 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_1640 48448c1ebe8dddbafc6ad72257b38811 293 SUPERFAMILY SSF46785 48 121 1.5E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1640 48448c1ebe8dddbafc6ad72257b38811 293 Pfam PF01614 Bacterial transcriptional regulator 172 290 1.5E-23 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_1640 48448c1ebe8dddbafc6ad72257b38811 293 Pfam PF09339 IclR helix-turn-helix domain 50 100 6.8E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_1640 48448c1ebe8dddbafc6ad72257b38811 293 Gene3D G3DSA:1.10.10.10 46 120 8.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1640 48448c1ebe8dddbafc6ad72257b38811 293 SMART SM00346 48 138 6.8E-23 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_2780 1928214caa3b45a526ecb7f04ddc2d60 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 4 72 14.163 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2780 1928214caa3b45a526ecb7f04ddc2d60 75 Pfam PF00137 ATP synthase subunit C 9 71 8.1E-14 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TMO_2780 1928214caa3b45a526ecb7f04ddc2d60 75 PRINTS PR00124 ATP synthase C subunit signature 30 45 8.4E-28 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2780 1928214caa3b45a526ecb7f04ddc2d60 75 PRINTS PR00124 ATP synthase C subunit signature 9 28 8.4E-28 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2780 1928214caa3b45a526ecb7f04ddc2d60 75 PRINTS PR00124 ATP synthase C subunit signature 47 72 8.4E-28 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2780 1928214caa3b45a526ecb7f04ddc2d60 75 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2780 1928214caa3b45a526ecb7f04ddc2d60 75 Gene3D G3DSA:1.20.20.10 3 74 3.2E-26 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2780 1928214caa3b45a526ecb7f04ddc2d60 75 SUPERFAMILY SSF81333 5 73 2.35E-18 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily TMO_2678 ea5919aa9fd16f4dbb5bdf85de2b4046 179 Gene3D G3DSA:3.40.980.10 6 174 2.4E-47 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_2678 ea5919aa9fd16f4dbb5bdf85de2b4046 179 SMART SM00852 17 161 1.0E-33 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_2678 ea5919aa9fd16f4dbb5bdf85de2b4046 179 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 11 172 4.3E-73 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 TMO_2678 ea5919aa9fd16f4dbb5bdf85de2b4046 179 Pfam PF00994 Probable molybdopterin binding domain 18 157 3.0E-34 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_2678 ea5919aa9fd16f4dbb5bdf85de2b4046 179 SUPERFAMILY SSF53218 8 173 2.22E-45 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_2678 ea5919aa9fd16f4dbb5bdf85de2b4046 179 PIRSF PIRSF006443 2 169 3.4E-57 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 TMO_2678 ea5919aa9fd16f4dbb5bdf85de2b4046 179 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 15 153 2.1E-32 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_3402 9513c94e273136939b96149a2e039367 303 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 24 106 8.1E-24 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 TMO_3402 9513c94e273136939b96149a2e039367 303 SUPERFAMILY SSF51735 120 289 9.62E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3402 9513c94e273136939b96149a2e039367 303 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 21 288 4.6E-62 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 TMO_3402 9513c94e273136939b96149a2e039367 303 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 139 185 1.2E-7 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase TMO_3402 9513c94e273136939b96149a2e039367 303 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 19 294 31.999 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 TMO_3402 9513c94e273136939b96149a2e039367 303 Gene3D G3DSA:3.40.50.10860 24 282 1.7E-80 T 14-10-2018 TMO_3402 9513c94e273136939b96149a2e039367 303 SUPERFAMILY SSF53223 13 119 1.67E-31 T 14-10-2018 TMO_3402 9513c94e273136939b96149a2e039367 303 Gene3D G3DSA:3.40.50.720 118 261 1.7E-80 T 14-10-2018 TMO_3351 0a5bc804f8422ee7b886bce3bd82e291 237 SUPERFAMILY SSF52499 5 207 1.92E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_3351 0a5bc804f8422ee7b886bce3bd82e291 237 Gene3D G3DSA:3.40.50.850 3 207 6.4E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_3351 0a5bc804f8422ee7b886bce3bd82e291 237 Pfam PF00857 Isochorismatase family 15 168 5.5E-26 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_0462 50006332fdc3a8dd1867a964b7084843 258 Pfam PF07729 FCD domain 100 226 1.5E-20 T 14-10-2018 IPR011711 GntR, C-terminal TMO_0462 50006332fdc3a8dd1867a964b7084843 258 SUPERFAMILY SSF48008 97 232 3.4E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0462 50006332fdc3a8dd1867a964b7084843 258 SUPERFAMILY SSF46785 15 76 1.77E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0462 50006332fdc3a8dd1867a964b7084843 258 Gene3D G3DSA:1.20.120.530 97 235 1.0E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0462 50006332fdc3a8dd1867a964b7084843 258 SMART SM00345 17 76 3.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0462 50006332fdc3a8dd1867a964b7084843 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0462 50006332fdc3a8dd1867a964b7084843 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0462 50006332fdc3a8dd1867a964b7084843 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 73 3.2E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0462 50006332fdc3a8dd1867a964b7084843 258 SMART SM00895 99 227 2.4E-16 T 14-10-2018 IPR011711 GntR, C-terminal TMO_0462 50006332fdc3a8dd1867a964b7084843 258 Gene3D G3DSA:1.10.10.10 11 75 7.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0376 1ce14574c9f46ea45533e884e3296c2f 282 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 3 254 36.099 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 TMO_b0376 1ce14574c9f46ea45533e884e3296c2f 282 Gene3D G3DSA:3.60.21.10 1 280 1.2E-72 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like TMO_b0376 1ce14574c9f46ea45533e884e3296c2f 282 Pfam PF00149 Calcineurin-like phosphoesterase 3 198 9.4E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TMO_b0376 1ce14574c9f46ea45533e884e3296c2f 282 SUPERFAMILY SSF56300 3 255 3.95E-51 T 14-10-2018 TMO_1974 546346f3a8f2d67d959a59659fcdc31c 208 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 125 143 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1974 546346f3a8f2d67d959a59659fcdc31c 208 PIRSF PIRSF000216 1 207 5.5E-76 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1974 546346f3a8f2d67d959a59659fcdc31c 208 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 168 1.4E-63 T 14-10-2018 TMO_1974 546346f3a8f2d67d959a59659fcdc31c 208 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 21 167 8.6E-59 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1974 546346f3a8f2d67d959a59659fcdc31c 208 Gene3D G3DSA:3.40.30.10 86 186 1.2E-33 T 14-10-2018 TMO_1974 546346f3a8f2d67d959a59659fcdc31c 208 SUPERFAMILY SSF52833 13 181 1.57E-60 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_1974 546346f3a8f2d67d959a59659fcdc31c 208 Gene3D G3DSA:1.10.10.1590 11 85 2.6E-30 T 14-10-2018 TMO_1095 0bfeac7093d39dbb71913f0520a42f0c 264 Hamap MF_00415 Flagellar L-ring protein [flgH]. 16 262 24.733 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_1095 0bfeac7093d39dbb71913f0520a42f0c 264 PRINTS PR01008 Flagellar L-ring protein signature 99 111 1.2E-27 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_1095 0bfeac7093d39dbb71913f0520a42f0c 264 PRINTS PR01008 Flagellar L-ring protein signature 204 220 1.2E-27 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_1095 0bfeac7093d39dbb71913f0520a42f0c 264 PRINTS PR01008 Flagellar L-ring protein signature 178 193 1.2E-27 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_1095 0bfeac7093d39dbb71913f0520a42f0c 264 PRINTS PR01008 Flagellar L-ring protein signature 241 255 1.2E-27 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_1095 0bfeac7093d39dbb71913f0520a42f0c 264 PRINTS PR01008 Flagellar L-ring protein signature 225 239 1.2E-27 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_1095 0bfeac7093d39dbb71913f0520a42f0c 264 Pfam PF02107 Flagellar L-ring protein 79 263 4.9E-54 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_3390 10cc83fc84cfea8f08fec0d6c9344b82 91 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 21 86 1.4E-16 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D TMO_3390 10cc83fc84cfea8f08fec0d6c9344b82 91 Gene3D G3DSA:1.10.10.1150 14 87 2.7E-6 T 14-10-2018 TMO_b0454 091c78815f14c46f494fa68013c9d1e8 248 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 8 228 5.6E-75 T 14-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 TMO_b0454 091c78815f14c46f494fa68013c9d1e8 248 Gene3D G3DSA:1.20.950.20 2 218 9.4E-77 T 14-10-2018 TMO_b0454 091c78815f14c46f494fa68013c9d1e8 248 Pfam PF02665 Nitrate reductase gamma subunit 9 227 2.4E-82 T 14-10-2018 IPR023234 NarG-like domain TMO_b0454 091c78815f14c46f494fa68013c9d1e8 248 SUPERFAMILY SSF103501 4 227 1.1E-63 T 14-10-2018 IPR036197 NarG-like superfamily TMO_b0234 f287d8b2d95291ffa58e5eaa66ce12f6 570 Gene3D G3DSA:3.40.50.12780 12 453 2.1E-95 T 14-10-2018 TMO_b0234 f287d8b2d95291ffa58e5eaa66ce12f6 570 Pfam PF13193 AMP-binding enzyme C-terminal domain 467 552 3.9E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0234 f287d8b2d95291ffa58e5eaa66ce12f6 570 SUPERFAMILY SSF56801 32 566 6.67E-128 T 14-10-2018 TMO_b0234 f287d8b2d95291ffa58e5eaa66ce12f6 570 Gene3D G3DSA:3.30.300.310 454 567 2.0E-29 T 14-10-2018 TMO_b0234 f287d8b2d95291ffa58e5eaa66ce12f6 570 ProSitePatterns PS00455 Putative AMP-binding domain signature. 204 215 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0234 f287d8b2d95291ffa58e5eaa66ce12f6 570 Pfam PF00501 AMP-binding enzyme 40 458 3.1E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0851 9bc6336e082e4dc7847ab3339ee3b4c6 334 SUPERFAMILY SSF52518 9 333 1.2E-98 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_c0851 9bc6336e082e4dc7847ab3339ee3b4c6 334 Pfam PF00676 Dehydrogenase E1 component 27 323 2.0E-98 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 TMO_c0851 9bc6336e082e4dc7847ab3339ee3b4c6 334 Gene3D G3DSA:3.40.50.970 5 334 4.3E-117 T 14-10-2018 TMO_a0324 1fcfbde49ab4fbb3a5404a457500edec 432 SUPERFAMILY SSF102114 189 403 3.66E-22 T 14-10-2018 TMO_a0324 1fcfbde49ab4fbb3a5404a457500edec 432 Gene3D G3DSA:3.80.30.20 203 403 1.5E-9 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TMO_a0324 1fcfbde49ab4fbb3a5404a457500edec 432 SMART SM00729 204 406 7.2E-7 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_a0324 1fcfbde49ab4fbb3a5404a457500edec 432 Pfam PF04055 Radical SAM superfamily 209 350 8.1E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_a0324 1fcfbde49ab4fbb3a5404a457500edec 432 TIGRFAM TIGR04295 B12_rSAM_oligo: B12-binding domain/radical SAM domain protein, rhizo-twelve system 2 427 9.0E-215 T 14-10-2018 IPR027559 B12-binding domain/radical SAM domain protein, rhizo-twelve system TMO_c0233 9f6b219cfa269e6172c1a52f35642017 148 Gene3D G3DSA:1.10.260.40 5 78 8.7E-16 T 14-10-2018 TMO_c0233 9f6b219cfa269e6172c1a52f35642017 148 SUPERFAMILY SSF47413 5 80 1.21E-23 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_c0233 9f6b219cfa269e6172c1a52f35642017 148 Pfam PF01381 Helix-turn-helix 16 69 3.9E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0233 9f6b219cfa269e6172c1a52f35642017 148 SMART SM00530 15 70 4.0E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_b0398 18812f8187fc3d30b3b760e3ac680500 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 248 266 3.2E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0398 18812f8187fc3d30b3b760e3ac680500 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 43 59 3.2E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0398 18812f8187fc3d30b3b760e3ac680500 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 21 37 3.2E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0398 18812f8187fc3d30b3b760e3ac680500 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 62 80 3.2E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0398 18812f8187fc3d30b3b760e3ac680500 367 Pfam PF13458 Periplasmic binding protein 21 344 1.5E-50 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_b0398 18812f8187fc3d30b3b760e3ac680500 367 SUPERFAMILY SSF53822 21 327 3.7E-52 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_b0398 18812f8187fc3d30b3b760e3ac680500 367 Gene3D G3DSA:3.40.50.2300 23 349 8.1E-57 T 14-10-2018 TMO_b0398 18812f8187fc3d30b3b760e3ac680500 367 Gene3D G3DSA:3.40.50.2300 134 355 8.1E-57 T 14-10-2018 TMO_1892 f39c7e42b38816751235df1d881bfc8c 711 SUPERFAMILY SSF56935 26 711 8.47E-122 T 14-10-2018 TMO_1892 f39c7e42b38816751235df1d881bfc8c 711 Gene3D G3DSA:2.40.170.20 180 711 9.1E-150 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_1892 f39c7e42b38816751235df1d881bfc8c 711 Gene3D G3DSA:2.170.130.10 51 179 2.7E-32 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_1892 f39c7e42b38816751235df1d881bfc8c 711 Pfam PF00593 TonB dependent receptor 285 708 4.2E-52 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_1892 f39c7e42b38816751235df1d881bfc8c 711 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 711 2.6E-107 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_1892 f39c7e42b38816751235df1d881bfc8c 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 172 7.1E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_b0580 9123090a32619786c2d7498a9b6d49ee 90 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 1 74 1.6E-12 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain TMO_b0580 9123090a32619786c2d7498a9b6d49ee 90 Gene3D G3DSA:1.10.1040.10 1 79 3.1E-17 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_b0580 9123090a32619786c2d7498a9b6d49ee 90 SUPERFAMILY SSF48179 1 73 9.18E-14 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 160 4.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 130 144 4.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 172 4.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 Pfam PF00196 Bacterial regulatory proteins, luxR family 129 182 2.6E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 SUPERFAMILY SSF55785 18 116 9.6E-15 T 14-10-2018 IPR035965 PAS domain superfamily TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 ProSitePatterns PS00622 LuxR-type HTH domain signature. 144 171 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 SMART SM00421 127 184 1.5E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 Gene3D G3DSA:3.30.450.20 14 123 2.0E-20 T 14-10-2018 TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 Pfam PF08447 PAS fold 32 104 1.5E-7 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 105 5.4E-11 T 14-10-2018 IPR000014 PAS domain TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 Gene3D G3DSA:1.10.10.10 124 186 8.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0559 9e186ed69de56b7b2dfc8b2700e9aa3b 188 SUPERFAMILY SSF46894 113 184 2.58E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_2458 38f9947dcbe1aaf2925aefbeffbe1fb3 97 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 44 9.8E-9 T 14-10-2018 TMO_2458 38f9947dcbe1aaf2925aefbeffbe1fb3 97 Gene3D G3DSA:3.40.1620.10 1 42 1.1E-10 T 14-10-2018 TMO_2458 38f9947dcbe1aaf2925aefbeffbe1fb3 97 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 44 8.0E-10 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TMO_2458 38f9947dcbe1aaf2925aefbeffbe1fb3 97 SUPERFAMILY SSF143120 3 45 8.89E-10 T 14-10-2018 IPR036165 YefM-like superfamily TMO_2954 5af1cdf1f1716538f1cd918cce60305b 252 Pfam PF07702 UTRA domain 111 247 7.4E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_2954 5af1cdf1f1716538f1cd918cce60305b 252 Gene3D G3DSA:3.40.1410.10 108 243 5.8E-32 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_2954 5af1cdf1f1716538f1cd918cce60305b 252 Gene3D G3DSA:1.10.10.10 24 93 3.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2954 5af1cdf1f1716538f1cd918cce60305b 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 89 5.4E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2954 5af1cdf1f1716538f1cd918cce60305b 252 SMART SM00345 30 89 1.2E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2954 5af1cdf1f1716538f1cd918cce60305b 252 SUPERFAMILY SSF46785 22 113 1.18E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2954 5af1cdf1f1716538f1cd918cce60305b 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 63 1.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2954 5af1cdf1f1716538f1cd918cce60305b 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 63 79 1.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2954 5af1cdf1f1716538f1cd918cce60305b 252 SMART SM00866 110 247 5.0E-28 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_2954 5af1cdf1f1716538f1cd918cce60305b 252 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 25 251 2.9E-93 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 TMO_2954 5af1cdf1f1716538f1cd918cce60305b 252 SUPERFAMILY SSF64288 77 250 2.51E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_2169 59b52b93115947e7079f12d6da88296a 264 Pfam PF00557 Metallopeptidase family M24 11 240 1.9E-53 T 14-10-2018 IPR000994 Peptidase M24 TMO_2169 59b52b93115947e7079f12d6da88296a 264 SUPERFAMILY SSF55920 1 254 1.83E-93 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like TMO_2169 59b52b93115947e7079f12d6da88296a 264 Hamap MF_01974 Methionine aminopeptidase [map]. 2 249 41.843 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_2169 59b52b93115947e7079f12d6da88296a 264 Gene3D G3DSA:3.90.230.10 1 251 9.2E-113 T 14-10-2018 TMO_2169 59b52b93115947e7079f12d6da88296a 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_2169 59b52b93115947e7079f12d6da88296a 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.1E-98 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_2169 59b52b93115947e7079f12d6da88296a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.0E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_2169 59b52b93115947e7079f12d6da88296a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 1.0E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_2169 59b52b93115947e7079f12d6da88296a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 1.0E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_2169 59b52b93115947e7079f12d6da88296a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 1.0E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TMO_0107 73777d6372c83e2e46f32cbf03919e5f 449 Pfam PF01458 Uncharacterized protein family (UPF0051) 186 409 1.6E-63 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 TMO_0107 73777d6372c83e2e46f32cbf03919e5f 449 SUPERFAMILY SSF101960 20 434 1.44E-95 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily TMO_0107 73777d6372c83e2e46f32cbf03919e5f 449 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 150 425 3.1E-78 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 TMO_0400 e9f36735fd5a723084e30192fd639cc1 866 SUPERFAMILY SSF82861 533 618 9.42E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TMO_0400 e9f36735fd5a723084e30192fd639cc1 866 SUPERFAMILY SSF82689 685 786 6.54E-20 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TMO_0400 e9f36735fd5a723084e30192fd639cc1 866 Gene3D G3DSA:3.30.70.100 686 775 4.3E-23 T 14-10-2018 TMO_0400 e9f36735fd5a723084e30192fd639cc1 866 Pfam PF00924 Mechanosensitive ion channel 577 777 1.1E-38 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TMO_0400 e9f36735fd5a723084e30192fd639cc1 866 SUPERFAMILY SSF50182 620 682 1.37E-10 T 14-10-2018 IPR010920 LSM domain superfamily TMO_0400 e9f36735fd5a723084e30192fd639cc1 866 Gene3D G3DSA:2.30.30.60 636 684 1.1E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 Gene3D G3DSA:3.40.1160.10 1 253 4.8E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 PIRSF PIRSF000726 1 62 5.1E-20 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 PIRSF PIRSF000726 56 406 1.2E-132 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 SUPERFAMILY SSF53633 3 243 6.68E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 402 6.3E-135 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 56 402 1.7E-122 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 SUPERFAMILY SSF55021 330 404 1.65E-22 T 14-10-2018 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 Pfam PF01842 ACT domain 265 324 4.2E-14 T 14-10-2018 IPR002912 ACT domain TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 SUPERFAMILY SSF55021 247 326 3.05E-22 T 14-10-2018 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 Pfam PF00696 Amino acid kinase family 3 230 5.4E-48 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 Gene3D G3DSA:3.30.70.260 260 338 8.3E-59 T 14-10-2018 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 Gene3D G3DSA:3.30.70.260 254 403 8.3E-59 T 14-10-2018 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 Pfam PF13840 ACT domain 336 398 1.0E-15 T 14-10-2018 IPR027795 CASTOR, ACT domain TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 3.0E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 3.0E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TMO_0375 a6cd7898b4470189e9a9d48598562f4e 406 PRINTS PR00474 Glutamate 5-kinase family signature 204 224 3.0E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 Pfam PF03552 Cellulose synthase 331 464 1.6E-8 T 14-10-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 9 718 6.1E-271 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 PRINTS PR01439 Cellulose synthase subunit A signature 407 433 2.4E-14 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 PRINTS PR01439 Cellulose synthase subunit A signature 62 82 2.4E-14 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 PRINTS PR01439 Cellulose synthase subunit A signature 146 165 2.4E-14 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 PRINTS PR01439 Cellulose synthase subunit A signature 476 495 2.4E-14 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 PRINTS PR01439 Cellulose synthase subunit A signature 548 569 2.4E-14 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 SUPERFAMILY SSF141371 571 626 4.9E-7 T 14-10-2018 TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 Pfam PF07238 PilZ domain 575 686 2.0E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 Gene3D G3DSA:3.90.550.10 127 367 1.1E-88 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 SUPERFAMILY SSF53448 126 433 1.41E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_1084 cbb1fee492902ed0733ac92bfae83c19 778 Pfam PF00535 Glycosyl transferase family 2 140 330 1.9E-34 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TMO_a0362 a0d18391551b6c804ecb80857a7d00ee 320 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 33 104 1.8E-7 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TMO_a0362 a0d18391551b6c804ecb80857a7d00ee 320 Gene3D G3DSA:1.10.443.10 130 312 1.6E-28 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TMO_a0362 a0d18391551b6c804ecb80857a7d00ee 320 Pfam PF00589 Phage integrase family 131 304 3.1E-24 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_a0362 a0d18391551b6c804ecb80857a7d00ee 320 Gene3D G3DSA:1.10.150.130 27 116 9.6E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal TMO_a0362 a0d18391551b6c804ecb80857a7d00ee 320 SUPERFAMILY SSF56349 28 309 3.24E-38 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_0928 c8952f642520d43dc2e8979a40baef0e 446 Gene3D G3DSA:3.40.50.2300 96 400 9.8E-89 T 14-10-2018 TMO_0928 c8952f642520d43dc2e8979a40baef0e 446 Pfam PF13458 Periplasmic binding protein 45 407 5.7E-68 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_0928 c8952f642520d43dc2e8979a40baef0e 446 Gene3D G3DSA:3.40.50.2300 182 407 9.8E-89 T 14-10-2018 TMO_0928 c8952f642520d43dc2e8979a40baef0e 446 SUPERFAMILY SSF53822 45 426 4.71E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_3420 3265e4783e18ab7370a48af8654727c9 344 Gene3D G3DSA:1.10.8.60 144 212 2.5E-7 T 14-10-2018 TMO_3420 3265e4783e18ab7370a48af8654727c9 344 Gene3D G3DSA:3.40.50.300 13 137 6.3E-11 T 14-10-2018 TMO_3420 3265e4783e18ab7370a48af8654727c9 344 Pfam PF06144 DNA polymerase III, delta subunit 24 190 2.6E-8 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 TMO_3420 3265e4783e18ab7370a48af8654727c9 344 SUPERFAMILY SSF48019 216 334 1.48E-15 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TMO_3420 3265e4783e18ab7370a48af8654727c9 344 Gene3D G3DSA:1.20.272.10 217 339 2.9E-13 T 14-10-2018 TMO_3420 3265e4783e18ab7370a48af8654727c9 344 SUPERFAMILY SSF52540 20 209 4.51E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3420 3265e4783e18ab7370a48af8654727c9 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 22 323 9.1E-52 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 TMO_b0190 8be6a3f0a045d94e5085eca9b9615df5 410 SUPERFAMILY SSF52518 49 406 3.13E-97 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_b0190 8be6a3f0a045d94e5085eca9b9615df5 410 Pfam PF00676 Dehydrogenase E1 component 83 379 9.4E-92 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 TMO_b0190 8be6a3f0a045d94e5085eca9b9615df5 410 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 6 45 4.5E-21 T 14-10-2018 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 TMO_b0190 8be6a3f0a045d94e5085eca9b9615df5 410 Gene3D G3DSA:3.40.50.970 3 408 2.8E-125 T 14-10-2018 TMO_b0409 b59b85b81159832dd6c6becf0c8602ad 417 Gene3D G3DSA:3.40.50.2300 44 371 2.3E-110 T 14-10-2018 TMO_b0409 b59b85b81159832dd6c6becf0c8602ad 417 Pfam PF13433 Periplasmic binding protein domain 43 380 5.7E-80 T 14-10-2018 TMO_b0409 b59b85b81159832dd6c6becf0c8602ad 417 SUPERFAMILY SSF53822 41 386 4.71E-92 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_b0409 b59b85b81159832dd6c6becf0c8602ad 417 Gene3D G3DSA:3.40.50.2300 157 381 2.3E-110 T 14-10-2018 TMO_2820 05e58a705d7a13294b93118da9d0628b 459 PIRSF PIRSF000521 3 387 3.5E-27 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_2820 05e58a705d7a13294b93118da9d0628b 459 Pfam PF00202 Aminotransferase class-III 25 447 6.7E-94 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_2820 05e58a705d7a13294b93118da9d0628b 459 Gene3D G3DSA:3.90.1150.10 26 447 1.4E-150 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_2820 05e58a705d7a13294b93118da9d0628b 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_2820 05e58a705d7a13294b93118da9d0628b 459 SUPERFAMILY SSF53383 21 448 8.87E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_2820 05e58a705d7a13294b93118da9d0628b 459 Gene3D G3DSA:3.40.640.10 59 338 1.4E-150 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0751 b449a3600c4fc789de5a069425cd1c22 419 Gene3D G3DSA:1.20.1250.20 2 403 1.5E-29 T 14-10-2018 TMO_0751 b449a3600c4fc789de5a069425cd1c22 419 SUPERFAMILY SSF103473 4 401 5.89E-33 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0751 b449a3600c4fc789de5a069425cd1c22 419 Pfam PF07690 Major Facilitator Superfamily 11 233 1.2E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_2425 f582e3c93b168181c32eddd98eddbf4f 110 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 5.9E-8 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain TMO_2425 f582e3c93b168181c32eddd98eddbf4f 110 SUPERFAMILY SSF54909 1 100 1.48E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_2425 f582e3c93b168181c32eddd98eddbf4f 110 Gene3D G3DSA:3.30.70.100 1 93 1.9E-16 T 14-10-2018 TMO_b0340 8345db0b9c91f649cab43710054758ad 130 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 104 6.5E-13 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 TMO_b0340 8345db0b9c91f649cab43710054758ad 130 Gene3D G3DSA:2.170.150.70 5 96 3.9E-8 T 14-10-2018 TMO_b0340 8345db0b9c91f649cab43710054758ad 130 SUPERFAMILY SSF51316 2 124 4.18E-33 T 14-10-2018 IPR011057 Mss4-like superfamily TMO_2740 d906f23677ef2c776c0dfd14c8707c6b 381 Gene3D G3DSA:3.40.50.720 153 275 4.1E-9 T 14-10-2018 TMO_2740 d906f23677ef2c776c0dfd14c8707c6b 381 SUPERFAMILY SSF51735 156 267 1.04E-9 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0423 bffe173f1140684deb544f5b0ebb8fbf 280 Pfam PF04391 Protein of unknown function (DUF533) 66 264 8.5E-56 T 14-10-2018 IPR007486 Inner membrane protein YebE TMO_c0423 bffe173f1140684deb544f5b0ebb8fbf 280 Gene3D G3DSA:1.10.3680.10 146 265 1.5E-7 T 14-10-2018 IPR029024 TerB-like TMO_c0423 bffe173f1140684deb544f5b0ebb8fbf 280 SUPERFAMILY SSF158682 105 270 1.31E-16 T 14-10-2018 IPR029024 TerB-like TMO_1426 168ab77f88b66bc84607eff7e49147fd 255 SUPERFAMILY SSF46785 1 73 4.31E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1426 168ab77f88b66bc84607eff7e49147fd 255 SMART SM00346 1 91 6.4E-19 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_1426 168ab77f88b66bc84607eff7e49147fd 255 Gene3D G3DSA:3.30.450.40 75 254 2.3E-46 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_1426 168ab77f88b66bc84607eff7e49147fd 255 Pfam PF09339 IclR helix-turn-helix domain 4 54 2.2E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_1426 168ab77f88b66bc84607eff7e49147fd 255 Gene3D G3DSA:1.10.10.10 1 64 1.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1426 168ab77f88b66bc84607eff7e49147fd 255 SUPERFAMILY SSF55781 66 246 1.44E-42 T 14-10-2018 TMO_1426 168ab77f88b66bc84607eff7e49147fd 255 Pfam PF01614 Bacterial transcriptional regulator 123 242 8.0E-28 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 Pfam PF00392 Bacterial regulatory proteins, gntR family 120 156 2.2E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 79 1.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 Gene3D G3DSA:1.10.10.10 105 158 1.9E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 SUPERFAMILY SSF48008 168 297 1.7E-17 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 SMART SM00895 169 294 1.6E-10 T 14-10-2018 IPR011711 GntR, C-terminal TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 Pfam PF07729 FCD domain 169 293 1.1E-14 T 14-10-2018 IPR011711 GntR, C-terminal TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 SUPERFAMILY SSF46785 18 86 2.44E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 Gene3D G3DSA:1.10.10.10 7 83 1.0E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 SUPERFAMILY SSF46785 120 159 1.72E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 Gene3D G3DSA:1.20.120.530 167 300 1.0E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 SMART SM00345 107 158 0.53 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0346 66ee6a223e773b157b8722b34970ef7c 305 SMART SM00345 24 82 6.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1377 8f3d08f1a4c50e1fe46d580d13d13c86 675 Pfam PF04055 Radical SAM superfamily 292 472 2.0E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_1377 8f3d08f1a4c50e1fe46d580d13d13c86 675 SUPERFAMILY SSF102114 263 482 1.06E-19 T 14-10-2018 TMO_1377 8f3d08f1a4c50e1fe46d580d13d13c86 675 Gene3D G3DSA:3.80.30.20 286 488 2.1E-9 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TMO_1377 8f3d08f1a4c50e1fe46d580d13d13c86 675 SMART SM00729 287 508 7.3E-9 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_b0476 19c946f6e1b710912d7edf262e8206fb 229 Gene3D G3DSA:3.40.50.300 1 228 1.3E-56 T 14-10-2018 TMO_b0476 19c946f6e1b710912d7edf262e8206fb 229 SMART SM00382 26 208 2.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0476 19c946f6e1b710912d7edf262e8206fb 229 Pfam PF00005 ABC transporter 17 158 1.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0476 19c946f6e1b710912d7edf262e8206fb 229 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 229 1.0E-100 T 14-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE TMO_b0476 19c946f6e1b710912d7edf262e8206fb 229 SUPERFAMILY SSF52540 2 219 1.98E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1924 26caf1376530063206eea3d33c650505 1150 SUPERFAMILY SSF55785 312 436 4.54E-17 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1924 26caf1376530063206eea3d33c650505 1150 SMART SM00388 908 977 7.9E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1924 26caf1376530063206eea3d33c650505 1150 Pfam PF12860 PAS fold 456 572 2.0E-20 T 14-10-2018 TMO_1924 26caf1376530063206eea3d33c650505 1150 Pfam PF05228 CHASE4 domain 74 220 3.9E-16 T 14-10-2018 IPR007892 CHASE4 TMO_1924 26caf1376530063206eea3d33c650505 1150 SUPERFAMILY SSF55781 729 895 1.46E-13 T 14-10-2018 TMO_1924 26caf1376530063206eea3d33c650505 1150 Pfam PF00512 His Kinase A (phospho-acceptor) domain 908 977 1.2E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1924 26caf1376530063206eea3d33c650505 1150 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 576 702 2.0E-10 T 14-10-2018 IPR000014 PAS domain TMO_1924 26caf1376530063206eea3d33c650505 1150 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 317 444 3.2E-11 T 14-10-2018 IPR000014 PAS domain TMO_1924 26caf1376530063206eea3d33c650505 1150 SMART SM00086 655 695 10.0 T 14-10-2018 IPR001610 PAC motif TMO_1924 26caf1376530063206eea3d33c650505 1150 SMART SM00086 396 438 0.15 T 14-10-2018 IPR001610 PAC motif TMO_1924 26caf1376530063206eea3d33c650505 1150 Pfam PF01590 GAF domain 732 883 3.1E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_1924 26caf1376530063206eea3d33c650505 1150 SUPERFAMILY SSF55874 966 1134 3.93E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1924 26caf1376530063206eea3d33c650505 1150 Gene3D G3DSA:3.30.565.10 976 1137 2.1E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1924 26caf1376530063206eea3d33c650505 1150 SUPERFAMILY SSF47384 893 978 4.51E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_1924 26caf1376530063206eea3d33c650505 1150 Gene3D G3DSA:1.10.287.130 886 975 1.1E-25 T 14-10-2018 TMO_1924 26caf1376530063206eea3d33c650505 1150 Gene3D G3DSA:3.30.450.20 571 708 1.1E-15 T 14-10-2018 TMO_1924 26caf1376530063206eea3d33c650505 1150 Gene3D G3DSA:3.30.450.20 312 436 6.3E-19 T 14-10-2018 TMO_1924 26caf1376530063206eea3d33c650505 1150 Pfam PF08448 PAS fold 330 438 2.3E-10 T 14-10-2018 IPR013656 PAS fold-4 TMO_1924 26caf1376530063206eea3d33c650505 1150 SMART SM00387 1023 1136 5.5E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1924 26caf1376530063206eea3d33c650505 1150 SMART SM00091 580 647 12.0 T 14-10-2018 IPR000014 PAS domain TMO_1924 26caf1376530063206eea3d33c650505 1150 SMART SM00091 450 516 4.2 T 14-10-2018 IPR000014 PAS domain TMO_1924 26caf1376530063206eea3d33c650505 1150 SMART SM00091 320 386 1.1E-4 T 14-10-2018 IPR000014 PAS domain TMO_1924 26caf1376530063206eea3d33c650505 1150 SMART SM00065 729 893 1.7E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_1924 26caf1376530063206eea3d33c650505 1150 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1024 1135 1.9E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1924 26caf1376530063206eea3d33c650505 1150 SUPERFAMILY SSF55785 434 518 3.56E-7 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1924 26caf1376530063206eea3d33c650505 1150 SUPERFAMILY SSF55785 566 693 9.25E-14 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1924 26caf1376530063206eea3d33c650505 1150 Gene3D G3DSA:3.30.450.20 445 570 8.0E-6 T 14-10-2018 TMO_1924 26caf1376530063206eea3d33c650505 1150 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1061 1075 1.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1924 26caf1376530063206eea3d33c650505 1150 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1120 1133 1.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1924 26caf1376530063206eea3d33c650505 1150 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1096 1114 1.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1924 26caf1376530063206eea3d33c650505 1150 Gene3D G3DSA:3.30.450.40 709 885 2.1E-9 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_1924 26caf1376530063206eea3d33c650505 1150 Pfam PF13188 PAS domain 580 619 1.7E-5 T 14-10-2018 IPR000014 PAS domain TMO_b0146 d084e1e9bdb9e775b7eb102b88ec1355 333 Gene3D G3DSA:3.40.190.10 31 298 7.9E-66 T 14-10-2018 TMO_b0146 d084e1e9bdb9e775b7eb102b88ec1355 333 SUPERFAMILY SSF53850 35 248 2.25E-31 T 14-10-2018 TMO_b0146 d084e1e9bdb9e775b7eb102b88ec1355 333 Pfam PF09084 NMT1/THI5 like 39 245 2.8E-44 T 14-10-2018 IPR015168 SsuA/THI5-like TMO_b0146 d084e1e9bdb9e775b7eb102b88ec1355 333 Gene3D G3DSA:3.40.190.10 110 212 7.9E-66 T 14-10-2018 TMO_0227 07b5375717ab5731eec157b1816ad869 303 SUPERFAMILY SSF103481 198 293 1.7E-9 T 14-10-2018 TMO_0227 07b5375717ab5731eec157b1816ad869 303 Pfam PF00892 EamA-like transporter family 17 144 1.5E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_0227 07b5375717ab5731eec157b1816ad869 303 Pfam PF00892 EamA-like transporter family 161 290 1.6E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_0227 07b5375717ab5731eec157b1816ad869 303 SUPERFAMILY SSF103481 53 148 5.36E-12 T 14-10-2018 TMO_c0668 441f6e248b2932f3d341fd4fccfc0ff1 246 PIRSF PIRSF000441 1 237 7.9E-84 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 TMO_c0668 441f6e248b2932f3d341fd4fccfc0ff1 246 SUPERFAMILY SSF51161 5 171 1.08E-52 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_c0668 441f6e248b2932f3d341fd4fccfc0ff1 246 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 0.0013 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_c0668 441f6e248b2932f3d341fd4fccfc0ff1 246 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 150 1.6E-5 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_c0668 441f6e248b2932f3d341fd4fccfc0ff1 246 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 1.4E-75 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 TMO_c0668 441f6e248b2932f3d341fd4fccfc0ff1 246 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TMO_c0668 441f6e248b2932f3d341fd4fccfc0ff1 246 Gene3D G3DSA:2.160.10.10 67 182 3.4E-35 T 14-10-2018 TMO_c0668 441f6e248b2932f3d341fd4fccfc0ff1 246 Gene3D G3DSA:1.10.3130.10 1 66 2.8E-22 T 14-10-2018 TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 SUPERFAMILY SSF52540 80 352 8.88E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 5 459 3.3E-179 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 346 1.1E-63 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 7 75 6.2E-11 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 SUPERFAMILY SSF47917 349 462 2.01E-40 T 14-10-2018 TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 SMART SM00382 145 375 0.0039 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 SUPERFAMILY SSF50615 5 77 5.49E-18 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 Gene3D G3DSA:2.40.10.170 2 77 3.0E-21 T 14-10-2018 TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 Gene3D G3DSA:1.10.1140.10 349 468 5.1E-43 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 Hamap MF_01347 ATP synthase subunit beta [atpB]. 2 464 46.593 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 TMO_1649 f90eb5c260b2adc1593c54a8df751f67 475 Gene3D G3DSA:3.40.50.300 78 348 7.1E-93 T 14-10-2018 TMO_3301 a6a915c12793702b0186e8781b9e7ce6 230 SUPERFAMILY SSF53056 14 229 3.27E-63 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 TMO_3301 a6a915c12793702b0186e8781b9e7ce6 230 SMART SM00947 51 221 1.9E-63 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_3301 a6a915c12793702b0186e8781b9e7ce6 230 Gene3D G3DSA:3.40.1050.10 17 228 2.2E-72 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 TMO_3301 a6a915c12793702b0186e8781b9e7ce6 230 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 108 128 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_3301 a6a915c12793702b0186e8781b9e7ce6 230 Pfam PF00484 Carbonic anhydrase 59 216 8.6E-49 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_0334 436ffaf26c01db429676d32fabdcadac 119 SUPERFAMILY SSF143011 1 84 8.24E-5 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_0334 436ffaf26c01db429676d32fabdcadac 119 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 14 108 2.4E-21 T 14-10-2018 IPR009241 Toxin HigB-like TMO_0582 f28e927becbb0b96b8e410f95b73c73c 323 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_0582 f28e927becbb0b96b8e410f95b73c73c 323 Gene3D G3DSA:3.40.1190.20 1 306 1.2E-64 T 14-10-2018 IPR029056 Ribokinase-like TMO_0582 f28e927becbb0b96b8e410f95b73c73c 323 Hamap MF_01987 Ribokinase [rbsK]. 1 307 19.241 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 TMO_0582 f28e927becbb0b96b8e410f95b73c73c 323 Pfam PF00294 pfkB family carbohydrate kinase 1 300 1.6E-41 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB TMO_0582 f28e927becbb0b96b8e410f95b73c73c 323 PRINTS PR00990 Ribokinase signature 223 234 4.8E-23 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 TMO_0582 f28e927becbb0b96b8e410f95b73c73c 323 PRINTS PR00990 Ribokinase signature 30 49 4.8E-23 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 TMO_0582 f28e927becbb0b96b8e410f95b73c73c 323 PRINTS PR00990 Ribokinase signature 107 120 4.8E-23 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 TMO_0582 f28e927becbb0b96b8e410f95b73c73c 323 PRINTS PR00990 Ribokinase signature 3 24 4.8E-23 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 TMO_0582 f28e927becbb0b96b8e410f95b73c73c 323 SUPERFAMILY SSF53613 1 300 1.34E-50 T 14-10-2018 IPR029056 Ribokinase-like TMO_b0020 72487068fcb56fa76c3b6c4606e6ea76 280 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 2 272 5.1E-66 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 TMO_b0020 72487068fcb56fa76c3b6c4606e6ea76 280 SUPERFAMILY SSF51197 1 276 1.51E-84 T 14-10-2018 TMO_b0020 72487068fcb56fa76c3b6c4606e6ea76 280 Gene3D G3DSA:3.60.130.10 1 280 4.1E-90 T 14-10-2018 TMO_3563 7a85b167aa197ee9e246260dc7e159bb 257 Gene3D G3DSA:1.10.12.10 200 256 5.4E-27 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_3563 7a85b167aa197ee9e246260dc7e159bb 257 SUPERFAMILY SSF52096 1 257 1.45E-92 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_3563 7a85b167aa197ee9e246260dc7e159bb 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_3563 7a85b167aa197ee9e246260dc7e159bb 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 256 1.7E-91 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_3563 7a85b167aa197ee9e246260dc7e159bb 257 Gene3D G3DSA:3.90.226.10 2 199 6.3E-80 T 14-10-2018 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 331 3.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 317 3.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 373 3.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 354 3.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 SUPERFAMILY SSF55874 208 374 1.24E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 SMART SM00388 153 218 7.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 Pfam PF00072 Response regulator receiver domain 400 509 2.0E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 Gene3D G3DSA:3.40.50.2300 394 523 9.3E-13 T 14-10-2018 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 269 374 1.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 Gene3D G3DSA:1.10.287.130 143 220 3.4E-15 T 14-10-2018 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 SUPERFAMILY SSF52172 396 516 1.15E-15 T 14-10-2018 IPR011006 CheY-like superfamily TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 SUPERFAMILY SSF47384 139 218 1.67E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 SMART SM00387 267 376 1.1E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 SMART SM00448 397 511 6.3E-4 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 Gene3D G3DSA:3.30.565.10 226 378 3.3E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 Pfam PF12860 PAS fold 21 137 2.7E-16 T 14-10-2018 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 Gene3D G3DSA:3.30.450.20 11 142 5.4E-8 T 14-10-2018 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 Pfam PF00512 His Kinase A (phospho-acceptor) domain 153 218 5.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0370 533a25a2697d6d4145709ee26c30de61 525 SUPERFAMILY SSF55785 25 140 1.31E-6 T 14-10-2018 IPR035965 PAS domain superfamily TMO_3419 67b4c1befb02abec2c0bb1a58694630d 310 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 209 2.8E-56 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 TMO_3419 67b4c1befb02abec2c0bb1a58694630d 310 Gene3D G3DSA:3.90.1530.30 52 115 6.8E-28 T 14-10-2018 TMO_3419 67b4c1befb02abec2c0bb1a58694630d 310 Gene3D G3DSA:1.10.10.2830 116 226 9.3E-40 T 14-10-2018 TMO_3419 67b4c1befb02abec2c0bb1a58694630d 310 SUPERFAMILY SSF110849 37 179 4.55E-34 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TMO_3419 67b4c1befb02abec2c0bb1a58694630d 310 Pfam PF02195 ParB-like nuclease domain 40 129 2.0E-26 T 14-10-2018 IPR003115 ParB/Sulfiredoxin TMO_3419 67b4c1befb02abec2c0bb1a58694630d 310 SMART SM00470 39 129 1.7E-34 T 14-10-2018 IPR003115 ParB/Sulfiredoxin TMO_c0867 376b18f391d5c86cb959b2d95ded4743 229 SUPERFAMILY SSF46689 27 108 5.49E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0867 376b18f391d5c86cb959b2d95ded4743 229 Pfam PF00440 Bacterial regulatory proteins, tetR family 40 86 1.3E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0867 376b18f391d5c86cb959b2d95ded4743 229 SUPERFAMILY SSF48498 108 226 7.23E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_c0867 376b18f391d5c86cb959b2d95ded4743 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 53 1.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0867 376b18f391d5c86cb959b2d95ded4743 229 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 61 84 1.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0867 376b18f391d5c86cb959b2d95ded4743 229 Gene3D G3DSA:1.10.357.10 26 229 6.5E-37 T 14-10-2018 TMO_1400 192a6015a153c18b577c241a160f13a5 283 Gene3D G3DSA:3.40.50.300 12 278 1.3E-63 T 14-10-2018 TMO_1400 192a6015a153c18b577c241a160f13a5 283 SMART SM00382 38 227 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1400 192a6015a153c18b577c241a160f13a5 283 SUPERFAMILY SSF52540 11 230 3.8E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1400 192a6015a153c18b577c241a160f13a5 283 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1400 192a6015a153c18b577c241a160f13a5 283 Pfam PF00005 ABC transporter 30 179 6.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 Gene3D G3DSA:3.50.50.60 383 446 5.3E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 412 430 1.1E-11 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 299 1.1E-11 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 167 1.1E-11 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 125 9.4E-34 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 Gene3D G3DSA:3.50.50.60 142 261 7.4E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 Gene3D G3DSA:3.50.50.60 277 382 5.3E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 438 6.3E-33 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 SUPERFAMILY SSF46548 8 154 3.03E-29 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 165 1.3E-17 T 14-10-2018 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 375 391 1.3E-17 T 14-10-2018 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 297 1.3E-17 T 14-10-2018 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 402 424 1.3E-17 T 14-10-2018 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 SUPERFAMILY SSF51971 143 384 8.83E-57 T 14-10-2018 TMO_c0378 d6def1d8ec47c08f73f158730ef593d2 457 Gene3D G3DSA:1.10.1060.10 8 137 2.5E-37 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_b0306 f28c0a713bdd4d5de7d3f79a69acf381 314 Pfam PF00929 Exonuclease 60 214 7.7E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TMO_b0306 f28c0a713bdd4d5de7d3f79a69acf381 314 SUPERFAMILY SSF53098 60 218 1.41E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_b0306 f28c0a713bdd4d5de7d3f79a69acf381 314 Gene3D G3DSA:3.30.420.10 56 223 1.4E-28 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_b0306 f28c0a713bdd4d5de7d3f79a69acf381 314 SMART SM00479 58 223 6.4E-13 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 283 1.4E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 Gene3D G3DSA:3.30.390.30 303 388 1.4E-24 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 Gene3D G3DSA:3.50.50.60 2 292 5.6E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 Gene3D G3DSA:3.50.50.60 96 221 5.6E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 146 1.5E-15 T 14-10-2018 TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 83 101 1.5E-15 T 14-10-2018 TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 230 1.5E-15 T 14-10-2018 TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 261 1.5E-15 T 14-10-2018 TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 SUPERFAMILY SSF51905 2 171 1.62E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 86 95 1.2E-11 T 14-10-2018 TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 261 1.2E-11 T 14-10-2018 TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 128 153 1.2E-11 T 14-10-2018 TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 SUPERFAMILY SSF55424 297 388 8.38E-25 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 SUPERFAMILY SSF51905 127 292 9.16E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0125 13fcc2d3781390c4ff6c21c317078ac4 392 Pfam PF14759 Reductase C-terminal 303 387 1.4E-25 T 14-10-2018 IPR028202 Reductase, C-terminal TMO_1845 11ad92c8c555c17e67bdc24fc3b382ee 159 Pfam PF04364 DNA polymerase III chi subunit, HolC 13 145 1.3E-34 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 TMO_1845 11ad92c8c555c17e67bdc24fc3b382ee 159 Gene3D G3DSA:3.40.50.10110 11 148 4.8E-22 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily TMO_1845 11ad92c8c555c17e67bdc24fc3b382ee 159 SUPERFAMILY SSF102400 13 149 1.44E-37 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily TMO_1888 c691006c8b8c442d2f47f90265da21b8 463 Pfam PF01734 Patatin-like phospholipase 103 259 1.1E-21 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TMO_1888 c691006c8b8c442d2f47f90265da21b8 463 Gene3D G3DSA:3.40.1090.20 219 270 4.1E-5 T 14-10-2018 TMO_1888 c691006c8b8c442d2f47f90265da21b8 463 Gene3D G3DSA:3.40.1090.10 90 203 2.1E-16 T 14-10-2018 TMO_1888 c691006c8b8c442d2f47f90265da21b8 463 SUPERFAMILY SSF52151 97 432 5.75E-50 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TMO_2744 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 SUPERFAMILY SSF52540 186 903 2.87E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2744 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 SMART SM00491 785 908 1.9E-6 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 TMO_2744 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 Gene3D G3DSA:3.40.50.300 742 923 9.9E-22 T 14-10-2018 TMO_2744 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 Pfam PF13307 Helicase C-terminal domain 767 904 2.8E-14 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 TMO_2744 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 Gene3D G3DSA:3.40.50.300 215 472 6.0E-28 T 14-10-2018 TMO_c0234 0603c494dd75baa25583e2fbe2f7479f 321 Gene3D G3DSA:3.30.230.20 21 152 6.0E-45 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TMO_c0234 0603c494dd75baa25583e2fbe2f7479f 321 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 23 310 2.7E-92 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TMO_c0234 0603c494dd75baa25583e2fbe2f7479f 321 SUPERFAMILY SSF54211 158 301 2.28E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_c0234 0603c494dd75baa25583e2fbe2f7479f 321 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 22 302 43.557 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TMO_c0234 0603c494dd75baa25583e2fbe2f7479f 321 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 24 298 1.8E-101 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TMO_c0234 0603c494dd75baa25583e2fbe2f7479f 321 SUPERFAMILY SSF54211 23 149 6.45E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_c0234 0603c494dd75baa25583e2fbe2f7479f 321 Gene3D G3DSA:3.30.1700.10 153 320 1.2E-57 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 Pfam PF01926 50S ribosome-binding GTPase 5 121 2.3E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 2.9E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 Gene3D G3DSA:3.10.20.30 49 364 6.7E-150 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 3.8E-151 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 44.39 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 SUPERFAMILY SSF81271 282 362 1.68E-35 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 SUPERFAMILY SSF52540 3 304 1.47E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 Gene3D G3DSA:3.40.50.300 4 281 6.7E-150 T 14-10-2018 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 PIRSF PIRSF006641 1 366 3.4E-155 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 Gene3D G3DSA:1.10.150.300 114 201 6.7E-150 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 2.9E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 2.9E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_0306 8c0136407f6d0936102d74b13fd00e49 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.9E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_3024 6d059baf0cbda1570986bcfe3ac1f5ef 276 Pfam PF12697 Alpha/beta hydrolase family 30 267 5.7E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3024 6d059baf0cbda1570986bcfe3ac1f5ef 276 SUPERFAMILY SSF53474 9 274 8.11E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3024 6d059baf0cbda1570986bcfe3ac1f5ef 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 220 234 1.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3024 6d059baf0cbda1570986bcfe3ac1f5ef 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 1.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3024 6d059baf0cbda1570986bcfe3ac1f5ef 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3024 6d059baf0cbda1570986bcfe3ac1f5ef 276 Gene3D G3DSA:3.40.50.1820 9 275 1.0E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0592 15e385d66341b9adcbc87c70e8d677c1 390 SUPERFAMILY SSF55729 186 358 2.05E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_0592 15e385d66341b9adcbc87c70e8d677c1 390 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 16 384 8.8E-156 T 14-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition TMO_c0870 886212c90ea1c4ae01d83701987de0bc 394 SUPERFAMILY SSF53901 4 268 5.26E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0870 886212c90ea1c4ae01d83701987de0bc 394 SUPERFAMILY SSF53901 271 390 1.98E-36 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0870 886212c90ea1c4ae01d83701987de0bc 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 390 2.2E-116 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_c0870 886212c90ea1c4ae01d83701987de0bc 394 Gene3D G3DSA:3.40.47.10 127 388 2.3E-127 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0870 886212c90ea1c4ae01d83701987de0bc 394 Gene3D G3DSA:3.40.47.10 8 275 2.3E-127 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0870 886212c90ea1c4ae01d83701987de0bc 394 PIRSF PIRSF000429 1 393 6.5E-114 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_c0870 886212c90ea1c4ae01d83701987de0bc 394 Pfam PF00108 Thiolase, N-terminal domain 4 258 3.9E-69 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_c0870 886212c90ea1c4ae01d83701987de0bc 394 Pfam PF02803 Thiolase, C-terminal domain 271 390 1.6E-38 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_c0870 886212c90ea1c4ae01d83701987de0bc 394 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 TMO_1603 6f238cd4811efe3f40b4b1c38bdfac42 262 Hamap MF_00201 DNA repair protein RecO [recO]. 2 242 16.544 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TMO_1603 6f238cd4811efe3f40b4b1c38bdfac42 262 SUPERFAMILY SSF57863 82 186 1.88E-8 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger TMO_1603 6f238cd4811efe3f40b4b1c38bdfac42 262 Pfam PF11967 Recombination protein O N terminal 1 68 1.4E-15 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal TMO_1603 6f238cd4811efe3f40b4b1c38bdfac42 262 Pfam PF02565 Recombination protein O C terminal 84 224 2.1E-22 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TMO_1603 6f238cd4811efe3f40b4b1c38bdfac42 262 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 190 7.0E-21 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TMO_1603 6f238cd4811efe3f40b4b1c38bdfac42 262 SUPERFAMILY SSF50249 2 65 8.22E-8 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_1603 6f238cd4811efe3f40b4b1c38bdfac42 262 Gene3D G3DSA:2.40.50.140 2 68 2.4E-8 T 14-10-2018 TMO_1603 6f238cd4811efe3f40b4b1c38bdfac42 262 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 154 229 1.0E-4 T 14-10-2018 TMO_0896 c4fcddbc3567a5436aede9d85e0f4f06 181 Pfam PF13277 YmdB-like protein 2 146 9.9E-50 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like TMO_0896 c4fcddbc3567a5436aede9d85e0f4f06 181 Gene3D G3DSA:3.60.21.10 1 152 1.6E-49 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like TMO_0896 c4fcddbc3567a5436aede9d85e0f4f06 181 SUPERFAMILY SSF56300 2 148 3.09E-39 T 14-10-2018 TMO_c0005 bf5241e15e0e7f5594dd488ea5f39955 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.3E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0005 bf5241e15e0e7f5594dd488ea5f39955 296 Gene3D G3DSA:3.40.190.10 162 268 2.0E-34 T 14-10-2018 TMO_c0005 bf5241e15e0e7f5594dd488ea5f39955 296 Gene3D G3DSA:1.10.10.10 1 85 6.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0005 bf5241e15e0e7f5594dd488ea5f39955 296 Gene3D G3DSA:3.40.190.10 90 287 2.0E-34 T 14-10-2018 TMO_c0005 bf5241e15e0e7f5594dd488ea5f39955 296 SUPERFAMILY SSF46785 1 85 1.1E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0005 bf5241e15e0e7f5594dd488ea5f39955 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0005 bf5241e15e0e7f5594dd488ea5f39955 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0005 bf5241e15e0e7f5594dd488ea5f39955 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0005 bf5241e15e0e7f5594dd488ea5f39955 296 SUPERFAMILY SSF53850 88 292 1.81E-34 T 14-10-2018 TMO_c0005 bf5241e15e0e7f5594dd488ea5f39955 296 Pfam PF03466 LysR substrate binding domain 87 291 5.8E-35 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0699 7906ed64eb065f7f799c966230707aaf 267 SUPERFAMILY SSF52096 2 266 3.98E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_0699 7906ed64eb065f7f799c966230707aaf 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 264 2.8E-55 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_0699 7906ed64eb065f7f799c966230707aaf 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 108 128 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_0699 7906ed64eb065f7f799c966230707aaf 267 Gene3D G3DSA:3.90.226.10 3 266 3.6E-67 T 14-10-2018 TMO_a0257 0cb98650b0caa1364c501628632f519f 520 SUPERFAMILY SSF52540 3 229 2.24E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0257 0cb98650b0caa1364c501628632f519f 520 Pfam PF00005 ABC transporter 281 436 1.9E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0257 0cb98650b0caa1364c501628632f519f 520 SMART SM00382 289 485 6.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0257 0cb98650b0caa1364c501628632f519f 520 SMART SM00382 29 220 2.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0257 0cb98650b0caa1364c501628632f519f 520 Gene3D G3DSA:3.40.50.300 1 234 9.5E-54 T 14-10-2018 TMO_a0257 0cb98650b0caa1364c501628632f519f 520 Gene3D G3DSA:3.40.50.300 251 510 2.7E-40 T 14-10-2018 TMO_a0257 0cb98650b0caa1364c501628632f519f 520 SUPERFAMILY SSF52540 246 496 2.66E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0257 0cb98650b0caa1364c501628632f519f 520 Pfam PF00005 ABC transporter 20 171 3.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0257 0cb98650b0caa1364c501628632f519f 520 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 Gene3D G3DSA:3.40.50.720 1 199 5.3E-80 T 14-10-2018 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 414 3.8E-138 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 PIRSF PIRSF000124 1 433 5.5E-144 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 Gene3D G3DSA:3.40.50.720 232 437 2.2E-79 T 14-10-2018 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 SUPERFAMILY SSF48179 201 299 6.46E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 SUPERFAMILY SSF51735 1 188 4.89E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 184 1.7E-64 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 SMART SM00984 317 418 8.9E-49 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 293 1.8E-37 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 Gene3D G3DSA:1.20.5.100 200 231 1.3E-18 T 14-10-2018 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 418 4.0E-32 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 SUPERFAMILY SSF52413 303 428 1.18E-39 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 TMO_0578 32dd428903cce94a9042a2e32fc55a3f 439 PIRSF PIRSF500134 1 436 1.6E-185 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 TMO_c0693 4280269ba9bcfb474b55da06cb1ed78b 415 SUPERFAMILY SSF103473 25 408 8.11E-37 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0693 4280269ba9bcfb474b55da06cb1ed78b 415 Gene3D G3DSA:1.20.1250.20 24 214 2.5E-14 T 14-10-2018 TMO_c0693 4280269ba9bcfb474b55da06cb1ed78b 415 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 38 399 2.3E-52 T 14-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB TMO_c0693 4280269ba9bcfb474b55da06cb1ed78b 415 Gene3D G3DSA:1.20.1250.20 228 410 4.0E-14 T 14-10-2018 TMO_3068 c70ff6d22ff263f745d0b7b7e163876f 413 Gene3D G3DSA:3.40.50.12780 1 316 1.2E-66 T 14-10-2018 TMO_3068 c70ff6d22ff263f745d0b7b7e163876f 413 Pfam PF00501 AMP-binding enzyme 120 277 2.5E-12 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_3068 c70ff6d22ff263f745d0b7b7e163876f 413 SUPERFAMILY SSF56801 110 383 9.81E-34 T 14-10-2018 TMO_3068 c70ff6d22ff263f745d0b7b7e163876f 413 Gene3D G3DSA:3.30.300.30 317 411 2.0E-13 T 14-10-2018 TMO_0033 f0e7e0c3ddee53c0ac858faf9320ae46 369 Gene3D G3DSA:3.20.20.120 117 347 4.6E-105 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TMO_0033 f0e7e0c3ddee53c0ac858faf9320ae46 369 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 15 329 4.1E-70 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 TMO_0033 f0e7e0c3ddee53c0ac858faf9320ae46 369 Gene3D G3DSA:3.30.390.10 10 351 4.6E-105 T 14-10-2018 IPR029017 Enolase-like, N-terminal TMO_0033 f0e7e0c3ddee53c0ac858faf9320ae46 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 123 1.4E-13 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain TMO_0033 f0e7e0c3ddee53c0ac858faf9320ae46 369 SMART SM00922 142 234 3.9E-17 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal TMO_0033 f0e7e0c3ddee53c0ac858faf9320ae46 369 SUPERFAMILY SSF54826 1 125 1.47E-28 T 14-10-2018 TMO_0033 f0e7e0c3ddee53c0ac858faf9320ae46 369 Pfam PF13378 Enolase C-terminal domain-like 147 354 1.3E-31 T 14-10-2018 IPR029065 Enolase C-terminal domain-like TMO_0033 f0e7e0c3ddee53c0ac858faf9320ae46 369 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 360 33.317 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 TMO_0033 f0e7e0c3ddee53c0ac858faf9320ae46 369 SUPERFAMILY SSF51604 114 361 2.88E-48 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TMO_2436 4eef1afb4f6c2063a7e6752718e82c26 328 Pfam PF03466 LysR substrate binding domain 94 302 1.5E-35 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2436 4eef1afb4f6c2063a7e6752718e82c26 328 Gene3D G3DSA:1.10.10.10 5 93 4.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2436 4eef1afb4f6c2063a7e6752718e82c26 328 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 4 303 3.5E-121 T 14-10-2018 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 TMO_2436 4eef1afb4f6c2063a7e6752718e82c26 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2436 4eef1afb4f6c2063a7e6752718e82c26 328 SUPERFAMILY SSF46785 5 116 4.97E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2436 4eef1afb4f6c2063a7e6752718e82c26 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2436 4eef1afb4f6c2063a7e6752718e82c26 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2436 4eef1afb4f6c2063a7e6752718e82c26 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2436 4eef1afb4f6c2063a7e6752718e82c26 328 Gene3D G3DSA:3.40.190.10 99 290 6.1E-41 T 14-10-2018 TMO_2436 4eef1afb4f6c2063a7e6752718e82c26 328 Gene3D G3DSA:3.40.190.10 172 274 6.1E-41 T 14-10-2018 TMO_2436 4eef1afb4f6c2063a7e6752718e82c26 328 SUPERFAMILY SSF53850 98 306 2.02E-36 T 14-10-2018 TMO_3143 019ac3b6d92666d479e09c19219ca915 448 Pfam PF01554 MatE 245 398 6.3E-12 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TMO_3143 019ac3b6d92666d479e09c19219ca915 448 Pfam PF01554 MatE 19 178 2.1E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TMO_3143 019ac3b6d92666d479e09c19219ca915 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 414 1.9E-61 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TMO_0168 9d61c0bb19070f5889d9151a5d7a40e2 303 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 88 102 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 TMO_0168 9d61c0bb19070f5889d9151a5d7a40e2 303 SUPERFAMILY SSF54506 17 156 7.33E-35 T 14-10-2018 TMO_0168 9d61c0bb19070f5889d9151a5d7a40e2 303 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 18 297 3.1E-76 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 TMO_0168 9d61c0bb19070f5889d9151a5d7a40e2 303 SUPERFAMILY SSF54506 173 297 1.24E-48 T 14-10-2018 TMO_0168 9d61c0bb19070f5889d9151a5d7a40e2 303 Gene3D G3DSA:3.10.310.10 19 295 6.4E-86 T 14-10-2018 TMO_0168 9d61c0bb19070f5889d9151a5d7a40e2 303 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 17 299 35.091 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 TMO_0168 9d61c0bb19070f5889d9151a5d7a40e2 303 Pfam PF01678 Diaminopimelate epimerase 178 289 6.7E-28 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 TMO_0168 9d61c0bb19070f5889d9151a5d7a40e2 303 Pfam PF01678 Diaminopimelate epimerase 19 148 1.4E-20 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 TMO_0168 9d61c0bb19070f5889d9151a5d7a40e2 303 Gene3D G3DSA:3.10.310.10 145 289 6.4E-86 T 14-10-2018 TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 PIRSF PIRSF000157 1 963 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 Pfam PF00676 Dehydrogenase E1 component 232 551 6.8E-60 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 Pfam PF02779 Transketolase, pyrimidine binding domain 617 811 3.7E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 SUPERFAMILY SSF52518 601 816 1.18E-51 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 Gene3D G3DSA:3.40.50.12470 581 827 1.1E-171 T 14-10-2018 TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 815 961 9.6E-56 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 10 961 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 9 47 1.5E-13 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 SUPERFAMILY SSF52518 141 563 2.29E-89 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 Gene3D G3DSA:3.40.50.11610 747 958 1.1E-171 T 14-10-2018 TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 Gene3D G3DSA:1.10.287.1150 103 185 8.0E-28 T 14-10-2018 TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 Gene3D G3DSA:3.40.50.970 186 555 2.3E-152 T 14-10-2018 TMO_3006 52ddf274049dfc00fd9f3edca567bc66 963 SMART SM00861 618 810 1.9E-57 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_b0446 827d7e2901eaef1e45a241d553e637eb 214 Pfam PF01613 Flavin reductase like domain 22 163 1.3E-18 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_b0446 827d7e2901eaef1e45a241d553e637eb 214 SMART SM00903 19 173 4.2E-22 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_b0446 827d7e2901eaef1e45a241d553e637eb 214 SUPERFAMILY SSF50475 2 186 1.72E-40 T 14-10-2018 TMO_b0446 827d7e2901eaef1e45a241d553e637eb 214 Gene3D G3DSA:2.30.110.10 1 209 1.4E-58 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_b0082 6487efd83d6527cbdb364d5e9a21c61a 315 SUPERFAMILY SSF56281 34 299 1.07E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_b0082 6487efd83d6527cbdb364d5e9a21c61a 315 Gene3D G3DSA:3.60.15.10 26 315 5.8E-91 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_b0082 6487efd83d6527cbdb364d5e9a21c61a 315 SMART SM00849 84 290 2.0E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_b0082 6487efd83d6527cbdb364d5e9a21c61a 315 Pfam PF00753 Metallo-beta-lactamase superfamily 84 277 6.8E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_a0525 cb8d2df6efa1f41762296ba4b9dd8b8c 308 SUPERFAMILY SSF52096 20 288 7.28E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0525 cb8d2df6efa1f41762296ba4b9dd8b8c 308 Gene3D G3DSA:1.10.12.10 232 288 2.0E-7 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_a0525 cb8d2df6efa1f41762296ba4b9dd8b8c 308 Gene3D G3DSA:3.90.226.10 12 228 6.7E-66 T 14-10-2018 TMO_a0525 cb8d2df6efa1f41762296ba4b9dd8b8c 308 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 287 1.1E-52 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_1509 0c6e44eace52598c04502f69559dd30e 344 Pfam PF05036 Sporulation related domain 263 342 5.7E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 TMO_1509 0c6e44eace52598c04502f69559dd30e 344 SUPERFAMILY SSF110997 264 340 7.06E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TMO_0628 5e55ec91a82b060c463bb5f4a332f085 286 Gene3D G3DSA:3.40.50.720 1 185 2.3E-60 T 14-10-2018 TMO_0628 5e55ec91a82b060c463bb5f4a332f085 286 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 280 4.7E-30 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_0628 5e55ec91a82b060c463bb5f4a332f085 286 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 185 5.1E-57 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_0628 5e55ec91a82b060c463bb5f4a332f085 286 SUPERFAMILY SSF51735 3 186 1.28E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0628 5e55ec91a82b060c463bb5f4a332f085 286 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 184 209 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_0628 5e55ec91a82b060c463bb5f4a332f085 286 Gene3D G3DSA:1.10.1040.10 189 286 1.9E-32 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_0628 5e55ec91a82b060c463bb5f4a332f085 286 SUPERFAMILY SSF48179 186 284 7.4E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_0628 5e55ec91a82b060c463bb5f4a332f085 286 PIRSF PIRSF000105 1 286 2.3E-83 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 TMO_1324 b9358035517436847de48933f79b9fdc 356 Pfam PF00400 WD domain, G-beta repeat 233 260 0.068 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 TMO_1324 b9358035517436847de48933f79b9fdc 356 SMART SM00320 312 349 11.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 TMO_1324 b9358035517436847de48933f79b9fdc 356 SMART SM00320 16 55 33.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 TMO_1324 b9358035517436847de48933f79b9fdc 356 SMART SM00320 182 220 22.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 TMO_1324 b9358035517436847de48933f79b9fdc 356 SMART SM00320 140 179 0.43 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 TMO_1324 b9358035517436847de48933f79b9fdc 356 SMART SM00320 222 260 0.36 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 TMO_1324 b9358035517436847de48933f79b9fdc 356 SMART SM00320 59 98 190.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 TMO_1324 b9358035517436847de48933f79b9fdc 356 Gene3D G3DSA:2.130.10.10 19 197 5.1E-16 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TMO_1324 b9358035517436847de48933f79b9fdc 356 SUPERFAMILY SSF50978 31 304 4.94E-35 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 TMO_1324 b9358035517436847de48933f79b9fdc 356 Gene3D G3DSA:2.130.10.10 198 356 1.5E-20 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TMO_1324 b9358035517436847de48933f79b9fdc 356 SUPERFAMILY SSF50978 282 350 4.58E-5 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 TMO_c0450 1f9e6b5725b990cecb65a28c789d9c9c 531 SUPERFAMILY SSF53850 32 528 2.79E-127 T 14-10-2018 TMO_c0450 1f9e6b5725b990cecb65a28c789d9c9c 531 Gene3D G3DSA:3.40.190.10 5 275 1.0E-66 T 14-10-2018 TMO_c0450 1f9e6b5725b990cecb65a28c789d9c9c 531 PIRSF PIRSF002741 1 531 7.5E-124 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_c0450 1f9e6b5725b990cecb65a28c789d9c9c 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 440 3.5E-83 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_c0450 1f9e6b5725b990cecb65a28c789d9c9c 531 Gene3D G3DSA:3.10.105.10 279 498 4.7E-55 T 14-10-2018 TMO_a0459 16b13f1338c7117a8a11d94cae8b3379 583 SUPERFAMILY SSF51120 311 582 1.67E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_a0459 16b13f1338c7117a8a11d94cae8b3379 583 Gene3D G3DSA:2.150.10.10 479 583 2.0E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 PIRSF PIRSF005419 24 707 6.3E-244 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 Gene3D G3DSA:1.10.490.80 610 707 1.1E-14 T 14-10-2018 TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 Gene3D G3DSA:3.40.30.60 375 517 1.0E-48 T 14-10-2018 TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 160 183 - T 14-10-2018 IPR025505 FHIPEP conserved site TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 Pfam PF00771 FHIPEP family 44 698 3.5E-262 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 33 707 1.2E-272 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 Gene3D G3DSA:1.10.8.540 518 606 4.9E-24 T 14-10-2018 TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 255 269 1.0E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 88 107 1.0E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 171 1.0E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 174 192 1.0E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 51 64 1.0E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_1240 bcfccea29a6ea105e98f3d65fa412e4c 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 204 221 1.0E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_3277 533347ccfa0a6d3adcbc1c53fb8178ca 584 Pfam PF00005 ABC transporter 363 512 2.4E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3277 533347ccfa0a6d3adcbc1c53fb8178ca 584 SUPERFAMILY SSF52540 340 580 2.66E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3277 533347ccfa0a6d3adcbc1c53fb8178ca 584 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3277 533347ccfa0a6d3adcbc1c53fb8178ca 584 Pfam PF00664 ABC transporter transmembrane region 53 288 9.4E-12 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_3277 533347ccfa0a6d3adcbc1c53fb8178ca 584 Gene3D G3DSA:3.40.50.300 334 582 2.4E-80 T 14-10-2018 TMO_3277 533347ccfa0a6d3adcbc1c53fb8178ca 584 SUPERFAMILY SSF90123 20 331 4.71E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_3277 533347ccfa0a6d3adcbc1c53fb8178ca 584 SMART SM00382 372 558 7.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3277 533347ccfa0a6d3adcbc1c53fb8178ca 584 Gene3D G3DSA:1.20.1560.10 4 332 6.7E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_3327 289d8ad4e42348d7a7de53d5b8431b4e 429 Pfam PF00563 EAL domain 192 425 5.4E-20 T 14-10-2018 IPR001633 EAL domain TMO_3327 289d8ad4e42348d7a7de53d5b8431b4e 429 Gene3D G3DSA:3.20.20.450 186 429 8.1E-26 T 14-10-2018 IPR035919 EAL domain superfamily TMO_3327 289d8ad4e42348d7a7de53d5b8431b4e 429 SUPERFAMILY SSF141868 192 426 2.35E-18 T 14-10-2018 IPR035919 EAL domain superfamily TMO_3500 0deedceb0990dac2715059a4aec28eae 539 Pfam PF00501 AMP-binding enzyme 15 437 1.3E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_3500 0deedceb0990dac2715059a4aec28eae 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_3500 0deedceb0990dac2715059a4aec28eae 539 Gene3D G3DSA:3.40.50.12780 1 432 1.2E-121 T 14-10-2018 TMO_3500 0deedceb0990dac2715059a4aec28eae 539 SUPERFAMILY SSF56801 6 534 9.29E-138 T 14-10-2018 TMO_3500 0deedceb0990dac2715059a4aec28eae 539 Gene3D G3DSA:3.30.300.310 433 535 3.0E-32 T 14-10-2018 TMO_3500 0deedceb0990dac2715059a4aec28eae 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 521 9.5E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0855 9bae063dcb12a5ebb2c3b2bd61510115 329 Gene3D G3DSA:3.50.30.50 127 329 3.2E-23 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TMO_0855 9bae063dcb12a5ebb2c3b2bd61510115 329 Pfam PF04199 Putative cyclase 79 264 3.1E-25 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TMO_0855 9bae063dcb12a5ebb2c3b2bd61510115 329 SUPERFAMILY SSF102198 75 328 2.62E-28 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TMO_1549 ace10a44de192c63c5ebd5ef4c20e971 127 SUPERFAMILY SSF64076 2 126 4.06E-33 T 14-10-2018 IPR036748 MTH938-like superfamily TMO_1549 ace10a44de192c63c5ebd5ef4c20e971 127 Gene3D G3DSA:3.40.1230.10 10 127 4.8E-33 T 14-10-2018 IPR036748 MTH938-like superfamily TMO_1549 ace10a44de192c63c5ebd5ef4c20e971 127 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 15 125 4.2E-27 T 14-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein TMO_3458 1e3c775a7c1ea3cd4ae623c13b9948d2 233 SUPERFAMILY SSF46785 5 79 7.18E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3458 1e3c775a7c1ea3cd4ae623c13b9948d2 233 Pfam PF07702 UTRA domain 91 229 2.0E-21 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_3458 1e3c775a7c1ea3cd4ae623c13b9948d2 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 4.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3458 1e3c775a7c1ea3cd4ae623c13b9948d2 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 4.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3458 1e3c775a7c1ea3cd4ae623c13b9948d2 233 Gene3D G3DSA:1.10.10.10 6 74 1.4E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3458 1e3c775a7c1ea3cd4ae623c13b9948d2 233 SMART SM00345 11 70 1.8E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3458 1e3c775a7c1ea3cd4ae623c13b9948d2 233 Gene3D G3DSA:3.40.1410.10 75 233 7.6E-23 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_3458 1e3c775a7c1ea3cd4ae623c13b9948d2 233 SMART SM00866 91 230 4.3E-15 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_3458 1e3c775a7c1ea3cd4ae623c13b9948d2 233 SUPERFAMILY SSF64288 58 233 5.81E-28 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_3458 1e3c775a7c1ea3cd4ae623c13b9948d2 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 1.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1887 810229cf6922432aeca5a0dec363720f 245 Gene3D G3DSA:3.90.1140.10 2 177 6.1E-48 T 14-10-2018 TMO_1887 810229cf6922432aeca5a0dec363720f 245 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 2 177 24.691 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 TMO_1887 810229cf6922432aeca5a0dec363720f 245 Pfam PF02834 LigT like Phosphoesterase 93 169 1.9E-13 T 14-10-2018 IPR014051 Phosphoesterase, HXTX TMO_1887 810229cf6922432aeca5a0dec363720f 245 Pfam PF02834 LigT like Phosphoesterase 8 86 1.4E-14 T 14-10-2018 IPR014051 Phosphoesterase, HXTX TMO_1887 810229cf6922432aeca5a0dec363720f 245 SUPERFAMILY SSF55144 3 175 3.31E-46 T 14-10-2018 IPR009097 Cyclic phosphodiesterase TMO_1887 810229cf6922432aeca5a0dec363720f 245 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 3 174 1.1E-43 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 TMO_c0900 6b34db87774d9394325a67538c699b7e 199 SUPERFAMILY SSF88874 3 188 2.88E-39 T 14-10-2018 TMO_c0900 6b34db87774d9394325a67538c699b7e 199 Pfam PF07484 Phage Tail Collar Domain 7 63 4.1E-24 T 14-10-2018 IPR011083 Phage tail collar domain TMO_c0900 6b34db87774d9394325a67538c699b7e 199 Gene3D G3DSA:3.90.1340.10 6 59 4.0E-14 T 14-10-2018 IPR037053 Phage tail collar domain superfamily TMO_c0900 6b34db87774d9394325a67538c699b7e 199 Gene3D G3DSA:4.10.1070.10 60 96 4.0E-14 T 14-10-2018 TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 Pfam PF02779 Transketolase, pyrimidine binding domain 322 482 1.9E-40 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 SUPERFAMILY SSF52518 7 384 1.3E-78 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 Gene3D G3DSA:3.40.50.920 499 631 5.4E-32 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 SMART SM00861 322 487 2.7E-68 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 631 44.706 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 Pfam PF02780 Transketolase, C-terminal domain 499 622 4.2E-26 T 14-10-2018 IPR033248 Transketolase, C-terminal domain TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 13 628 2.8E-242 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 Gene3D G3DSA:3.40.50.970 320 492 1.3E-66 T 14-10-2018 TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 285 3.2E-117 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 SUPERFAMILY SSF52518 321 508 5.1E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TMO_0966 8b2fc4cef5285f22dc917598d8d77969 645 SUPERFAMILY SSF52922 494 631 1.19E-30 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_b0575 aeff095155bc8cbb2af3fedb57d60514 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 6.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0575 aeff095155bc8cbb2af3fedb57d60514 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 6.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0575 aeff095155bc8cbb2af3fedb57d60514 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 6.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0575 aeff095155bc8cbb2af3fedb57d60514 277 Pfam PF00106 short chain dehydrogenase 3 190 1.1E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0575 aeff095155bc8cbb2af3fedb57d60514 277 SUPERFAMILY SSF51735 2 246 3.4E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0575 aeff095155bc8cbb2af3fedb57d60514 277 Gene3D G3DSA:3.40.50.720 2 276 6.8E-65 T 14-10-2018 TMO_b0575 aeff095155bc8cbb2af3fedb57d60514 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.5E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0575 aeff095155bc8cbb2af3fedb57d60514 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.5E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0575 aeff095155bc8cbb2af3fedb57d60514 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0575 aeff095155bc8cbb2af3fedb57d60514 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 2.5E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1663 43912e9e2ae5c2b9f05ca2ba950700b4 255 SUPERFAMILY SSF161098 59 245 1.19E-28 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1663 43912e9e2ae5c2b9f05ca2ba950700b4 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 248 6.8E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1663 43912e9e2ae5c2b9f05ca2ba950700b4 255 Gene3D G3DSA:1.10.3720.10 55 250 1.3E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3041 03638069933402087cdddcd1d4dde2dd 188 SUPERFAMILY SSF51182 1 175 1.53E-70 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_3041 03638069933402087cdddcd1d4dde2dd 188 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 173 1.4E-66 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TMO_3041 03638069933402087cdddcd1d4dde2dd 188 Gene3D G3DSA:2.60.120.10 1 186 5.2E-67 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_3041 03638069933402087cdddcd1d4dde2dd 188 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 173 4.7E-57 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TMO_3041 03638069933402087cdddcd1d4dde2dd 188 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 3.0E-67 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TMO_c0267 1c5f23ef0dbc229a921e3a74fbb3ce10 193 Gene3D G3DSA:1.10.260.40 2 75 2.3E-18 T 14-10-2018 TMO_c0267 1c5f23ef0dbc229a921e3a74fbb3ce10 193 Pfam PF07883 Cupin domain 114 182 4.0E-15 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_c0267 1c5f23ef0dbc229a921e3a74fbb3ce10 193 SUPERFAMILY SSF51182 52 183 1.55E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0267 1c5f23ef0dbc229a921e3a74fbb3ce10 193 Gene3D G3DSA:2.60.120.10 96 191 8.0E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_c0267 1c5f23ef0dbc229a921e3a74fbb3ce10 193 Pfam PF01381 Helix-turn-helix 13 67 2.8E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0267 1c5f23ef0dbc229a921e3a74fbb3ce10 193 SMART SM00530 12 67 3.8E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0267 1c5f23ef0dbc229a921e3a74fbb3ce10 193 SUPERFAMILY SSF47413 7 72 1.83E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0808 7602c68580e094881a93dce637d6b856 645 Gene3D G3DSA:1.10.150.130 100 211 2.1E-23 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal TMO_0808 7602c68580e094881a93dce637d6b856 645 Gene3D G3DSA:1.10.443.10 215 403 7.1E-13 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TMO_0808 7602c68580e094881a93dce637d6b856 645 Gene3D G3DSA:3.30.160.390 2 99 2.5E-29 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily TMO_0808 7602c68580e094881a93dce637d6b856 645 Pfam PF00589 Phage integrase family 215 392 4.9E-16 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_0808 7602c68580e094881a93dce637d6b856 645 Pfam PF13356 Arm DNA-binding domain 7 88 2.8E-16 T 14-10-2018 IPR025166 Integrase, DNA-binding domain TMO_0808 7602c68580e094881a93dce637d6b856 645 SUPERFAMILY SSF56349 100 402 4.71E-47 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_b0366 ca1c3d30ca920df79cfedfa899be1b0d 535 Gene3D G3DSA:3.40.50.12780 17 427 1.9E-101 T 14-10-2018 TMO_b0366 ca1c3d30ca920df79cfedfa899be1b0d 535 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0366 ca1c3d30ca920df79cfedfa899be1b0d 535 Pfam PF13193 AMP-binding enzyme C-terminal domain 443 518 3.3E-23 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0366 ca1c3d30ca920df79cfedfa899be1b0d 535 SUPERFAMILY SSF56801 22 531 3.27E-143 T 14-10-2018 TMO_b0366 ca1c3d30ca920df79cfedfa899be1b0d 535 Gene3D G3DSA:3.30.300.310 430 533 8.4E-34 T 14-10-2018 TMO_b0366 ca1c3d30ca920df79cfedfa899be1b0d 535 Pfam PF00501 AMP-binding enzyme 28 434 1.7E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0475 efb9bea9f3f109effd4cc9bd0d899df4 260 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 237 259 2.2E-5 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_b0475 efb9bea9f3f109effd4cc9bd0d899df4 260 SUPERFAMILY SSF52540 19 258 3.02E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0475 efb9bea9f3f109effd4cc9bd0d899df4 260 Gene3D G3DSA:3.40.50.300 16 260 5.9E-57 T 14-10-2018 TMO_b0475 efb9bea9f3f109effd4cc9bd0d899df4 260 Pfam PF00005 ABC transporter 37 190 2.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0475 efb9bea9f3f109effd4cc9bd0d899df4 260 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 20 260 5.5E-112 T 14-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 Pfam PF00330 Aconitase family (aconitate hydratase) 14 464 4.2E-160 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 Gene3D G3DSA:3.30.499.10 330 472 2.0E-48 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 8 472 58.087 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 SUPERFAMILY SSF53732 8 471 6.67E-167 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 PRINTS PR00415 Aconitase family signature 293 307 1.8E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 PRINTS PR00415 Aconitase family signature 406 419 1.8E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 PRINTS PR00415 Aconitase family signature 126 139 1.8E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 PRINTS PR00415 Aconitase family signature 216 229 1.8E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 PRINTS PR00415 Aconitase family signature 350 361 1.8E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 PRINTS PR00415 Aconitase family signature 89 102 1.8E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 PRINTS PR00415 Aconitase family signature 202 215 1.8E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 PRINTS PR00415 Aconitase family signature 115 123 1.8E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 PRINTS PR00415 Aconitase family signature 140 155 1.8E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 Gene3D G3DSA:3.30.499.20 11 293 7.2E-99 T 14-10-2018 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 9 471 9.7E-234 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 TMO_3252 edeb02e5e0ae474b58a3ee1927ae93d7 472 ProSitePatterns PS00450 Aconitase family signature 1. 346 362 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TMO_b0093 6339f3dc389f1d83a5f767e7ec8a8811 413 Gene3D G3DSA:3.50.50.60 110 396 1.3E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0093 6339f3dc389f1d83a5f767e7ec8a8811 413 SUPERFAMILY SSF54373 271 356 1.7E-10 T 14-10-2018 TMO_b0093 6339f3dc389f1d83a5f767e7ec8a8811 413 Pfam PF01266 FAD dependent oxidoreductase 6 395 1.6E-55 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_b0093 6339f3dc389f1d83a5f767e7ec8a8811 413 Gene3D G3DSA:3.50.50.60 2 72 3.1E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0093 6339f3dc389f1d83a5f767e7ec8a8811 413 SUPERFAMILY SSF51905 5 413 3.75E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0093 6339f3dc389f1d83a5f767e7ec8a8811 413 Gene3D G3DSA:3.30.9.10 136 355 1.3E-42 T 14-10-2018 TMO_a0035 524de6cceaf6932558d2d4639dbc1d6b 333 SUPERFAMILY SSF53335 53 319 1.02E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_a0035 524de6cceaf6932558d2d4639dbc1d6b 333 PIRSF PIRSF018005 8 332 6.4E-110 T 14-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 TMO_a0035 524de6cceaf6932558d2d4639dbc1d6b 333 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 29 329 1.1E-104 T 14-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent TMO_a0035 524de6cceaf6932558d2d4639dbc1d6b 333 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 28 328 6.3E-115 T 14-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 TMO_a0035 524de6cceaf6932558d2d4639dbc1d6b 333 Gene3D G3DSA:3.40.50.150 55 234 2.1E-47 T 14-10-2018 TMO_2739 e273da01dd5800f00b4e59785a0fec3d 590 SUPERFAMILY SSF55874 442 588 9.17E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2739 e273da01dd5800f00b4e59785a0fec3d 590 Pfam PF07695 7TM diverse intracellular signalling 140 342 4.0E-28 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 TMO_2739 e273da01dd5800f00b4e59785a0fec3d 590 SMART SM00387 481 589 4.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2739 e273da01dd5800f00b4e59785a0fec3d 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 6.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2739 e273da01dd5800f00b4e59785a0fec3d 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 6.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2739 e273da01dd5800f00b4e59785a0fec3d 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 6.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2739 e273da01dd5800f00b4e59785a0fec3d 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 587 2.4E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2739 e273da01dd5800f00b4e59785a0fec3d 590 Gene3D G3DSA:1.10.287.130 388 439 1.9E-31 T 14-10-2018 TMO_2739 e273da01dd5800f00b4e59785a0fec3d 590 Gene3D G3DSA:3.30.565.10 440 586 1.9E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0618 0acf0cf8f2e49819056bb3b68a1476e6 757 SMART SM00283 497 751 3.5E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0618 0acf0cf8f2e49819056bb3b68a1476e6 757 Gene3D G3DSA:1.20.1480.50 368 465 1.5E-10 T 14-10-2018 TMO_0618 0acf0cf8f2e49819056bb3b68a1476e6 757 Gene3D G3DSA:1.10.287.950 466 756 1.9E-53 T 14-10-2018 TMO_0618 0acf0cf8f2e49819056bb3b68a1476e6 757 SUPERFAMILY SSF58104 428 750 2.09E-60 T 14-10-2018 TMO_0618 0acf0cf8f2e49819056bb3b68a1476e6 757 SMART SM00304 408 460 1.7E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0618 0acf0cf8f2e49819056bb3b68a1476e6 757 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 557 723 3.5E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0618 0acf0cf8f2e49819056bb3b68a1476e6 757 Pfam PF00672 HAMP domain 408 454 1.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0713 9fef519e8e66b1d676336ae4373be243 268 SUPERFAMILY SSF53448 10 265 1.51E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_0713 9fef519e8e66b1d676336ae4373be243 268 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 11 265 1.1E-90 T 14-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 TMO_0713 9fef519e8e66b1d676336ae4373be243 268 Gene3D G3DSA:3.90.550.10 11 268 2.7E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_0713 9fef519e8e66b1d676336ae4373be243 268 Pfam PF00483 Nucleotidyl transferase 13 210 3.0E-16 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TMO_2046 46aea3fe04438ca6f4359cf669ce7eba 236 PIRSF PIRSF039137 1 235 2.4E-107 T 14-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 TMO_2046 46aea3fe04438ca6f4359cf669ce7eba 236 Gene3D G3DSA:3.40.50.300 1 235 2.6E-61 T 14-10-2018 TMO_2046 46aea3fe04438ca6f4359cf669ce7eba 236 Pfam PF00005 ABC transporter 17 161 1.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2046 46aea3fe04438ca6f4359cf669ce7eba 236 SUPERFAMILY SSF52540 2 232 8.99E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2046 46aea3fe04438ca6f4359cf669ce7eba 236 SMART SM00382 26 236 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2046 46aea3fe04438ca6f4359cf669ce7eba 236 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0984 b0644116b08576559285df895d4ff32a 270 Gene3D G3DSA:3.40.50.720 1 270 8.9E-64 T 14-10-2018 TMO_0984 b0644116b08576559285df895d4ff32a 270 PIRSF PIRSF000094 5 263 1.7E-111 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TMO_0984 b0644116b08576559285df895d4ff32a 270 SUPERFAMILY SSF51735 10 259 1.48E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0984 b0644116b08576559285df895d4ff32a 270 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 1.3E-88 T 14-10-2018 TMO_0984 b0644116b08576559285df895d4ff32a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0984 b0644116b08576559285df895d4ff32a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0984 b0644116b08576559285df895d4ff32a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0984 b0644116b08576559285df895d4ff32a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0984 b0644116b08576559285df895d4ff32a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2750 0229d0fdc16f8dffab5ac569c769de46 316 SUPERFAMILY SSF53850 102 300 5.25E-29 T 14-10-2018 TMO_2750 0229d0fdc16f8dffab5ac569c769de46 316 Gene3D G3DSA:1.10.10.10 14 99 1.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2750 0229d0fdc16f8dffab5ac569c769de46 316 SUPERFAMILY SSF46785 10 93 1.39E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2750 0229d0fdc16f8dffab5ac569c769de46 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 73 6.5E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2750 0229d0fdc16f8dffab5ac569c769de46 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 4.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2750 0229d0fdc16f8dffab5ac569c769de46 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 4.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2750 0229d0fdc16f8dffab5ac569c769de46 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 4.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2750 0229d0fdc16f8dffab5ac569c769de46 316 Pfam PF03466 LysR substrate binding domain 102 302 2.0E-29 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2750 0229d0fdc16f8dffab5ac569c769de46 316 Gene3D G3DSA:3.40.190.10 109 298 5.6E-49 T 14-10-2018 TMO_2750 0229d0fdc16f8dffab5ac569c769de46 316 Gene3D G3DSA:3.40.190.10 169 271 5.6E-49 T 14-10-2018 TMO_0740 7d626e2d252c8782d171d26ad8c9037c 317 SUPERFAMILY SSF103481 45 146 3.79E-11 T 14-10-2018 TMO_0740 7d626e2d252c8782d171d26ad8c9037c 317 SUPERFAMILY SSF103481 194 293 1.44E-13 T 14-10-2018 TMO_0740 7d626e2d252c8782d171d26ad8c9037c 317 Pfam PF00892 EamA-like transporter family 158 293 4.1E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_0740 7d626e2d252c8782d171d26ad8c9037c 317 Pfam PF00892 EamA-like transporter family 14 143 4.9E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_0101 fa04075f41f80d3e39cf60a27b46727f 541 Gene3D G3DSA:1.10.940.10 107 247 1.3E-29 T 14-10-2018 IPR035926 NusB-like superfamily TMO_0101 fa04075f41f80d3e39cf60a27b46727f 541 Pfam PF01029 NusB family 111 230 5.0E-17 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TMO_0101 fa04075f41f80d3e39cf60a27b46727f 541 Pfam PF01189 16S rRNA methyltransferase RsmB/F 338 535 3.5E-45 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 TMO_0101 fa04075f41f80d3e39cf60a27b46727f 541 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 320 334 4.3E-24 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TMO_0101 fa04075f41f80d3e39cf60a27b46727f 541 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 461 477 4.3E-24 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TMO_0101 fa04075f41f80d3e39cf60a27b46727f 541 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 520 537 4.3E-24 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TMO_0101 fa04075f41f80d3e39cf60a27b46727f 541 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 349 359 4.3E-24 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TMO_0101 fa04075f41f80d3e39cf60a27b46727f 541 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 423 4.3E-24 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TMO_0101 fa04075f41f80d3e39cf60a27b46727f 541 Gene3D G3DSA:3.40.50.150 337 541 2.1E-56 T 14-10-2018 TMO_0101 fa04075f41f80d3e39cf60a27b46727f 541 SUPERFAMILY SSF48013 111 253 2.45E-26 T 14-10-2018 IPR035926 NusB-like superfamily TMO_0101 fa04075f41f80d3e39cf60a27b46727f 541 SUPERFAMILY SSF53335 248 537 5.0E-63 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 28 72 3.5E-6 T 14-10-2018 IPR004176 Clp, N-terminal TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 770 847 2.2E-7 T 14-10-2018 IPR019489 Clp ATPase, C-terminal TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 SMART SM01086 770 864 0.0018 T 14-10-2018 IPR019489 Clp ATPase, C-terminal TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 847 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 597 763 8.3E-40 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 Gene3D G3DSA:1.10.1780.10 1 161 5.0E-36 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 225 357 7.4E-9 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 SUPERFAMILY SSF52540 547 841 3.8E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 SMART SM00382 598 741 4.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 SMART SM00382 220 361 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 709 723 8.3E-30 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 676 694 8.3E-30 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 620 8.3E-30 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 647 665 8.3E-30 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 SUPERFAMILY SSF52540 181 501 2.01E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 316 328 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 Gene3D G3DSA:3.40.50.300 551 768 4.3E-68 T 14-10-2018 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 Gene3D G3DSA:1.10.8.60 770 861 9.9E-6 T 14-10-2018 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 Gene3D G3DSA:3.40.50.300 366 545 2.1E-36 T 14-10-2018 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 Gene3D G3DSA:3.40.50.300 175 364 1.1E-62 T 14-10-2018 TMO_a0082 c7eb6839cdad9a77b75328fa22d9a00c 867 SUPERFAMILY SSF81923 11 125 4.71E-18 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TMO_3407 efd261dced315064f0361201334a5ea7 148 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 8 148 1.7E-52 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 TMO_3407 efd261dced315064f0361201334a5ea7 148 Pfam PF03653 Uncharacterised protein family (UPF0093) 7 148 1.8E-62 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 TMO_3407 efd261dced315064f0361201334a5ea7 148 PIRSF PIRSF004638 2 148 6.9E-62 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 TMO_0429 8357358146f0273d493c8a120bdc231a 213 SMART SM00895 77 198 4.6E-17 T 14-10-2018 IPR011711 GntR, C-terminal TMO_0429 8357358146f0273d493c8a120bdc231a 213 SMART SM00345 9 67 2.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0429 8357358146f0273d493c8a120bdc231a 213 SUPERFAMILY SSF48008 75 201 2.04E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0429 8357358146f0273d493c8a120bdc231a 213 SUPERFAMILY SSF46785 4 71 4.19E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0429 8357358146f0273d493c8a120bdc231a 213 Pfam PF07729 FCD domain 77 197 1.8E-21 T 14-10-2018 IPR011711 GntR, C-terminal TMO_0429 8357358146f0273d493c8a120bdc231a 213 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 3.4E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0429 8357358146f0273d493c8a120bdc231a 213 Gene3D G3DSA:1.10.10.10 2 68 8.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0429 8357358146f0273d493c8a120bdc231a 213 Gene3D G3DSA:1.20.120.530 73 208 3.1E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0470 6d6d31eb53a1101442c1830481fa5570 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 471 1.8E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0470 6d6d31eb53a1101442c1830481fa5570 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 5.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0470 6d6d31eb53a1101442c1830481fa5570 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 5.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0470 6d6d31eb53a1101442c1830481fa5570 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 5.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0470 6d6d31eb53a1101442c1830481fa5570 481 Gene3D G3DSA:3.30.565.10 321 478 4.4E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0470 6d6d31eb53a1101442c1830481fa5570 481 Gene3D G3DSA:1.10.287.130 204 307 1.0E-5 T 14-10-2018 TMO_0470 6d6d31eb53a1101442c1830481fa5570 481 SUPERFAMILY SSF55874 331 474 2.88E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0470 6d6d31eb53a1101442c1830481fa5570 481 SMART SM00387 366 474 9.8E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2500 670e0b1ecd24c19792439dfc7800454d 603 Pfam PF00733 Asparagine synthase 245 596 8.7E-89 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_2500 670e0b1ecd24c19792439dfc7800454d 603 Pfam PF13537 Glutamine amidotransferase domain 47 167 5.0E-41 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TMO_2500 670e0b1ecd24c19792439dfc7800454d 603 PIRSF PIRSF001589 1 603 2.4E-203 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_2500 670e0b1ecd24c19792439dfc7800454d 603 SUPERFAMILY SSF52402 234 574 5.59E-76 T 14-10-2018 TMO_2500 670e0b1ecd24c19792439dfc7800454d 603 Gene3D G3DSA:3.60.20.10 9 185 4.9E-55 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_2500 670e0b1ecd24c19792439dfc7800454d 603 SUPERFAMILY SSF56235 1 223 1.63E-55 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_2500 670e0b1ecd24c19792439dfc7800454d 603 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 530 1.6E-126 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_2500 670e0b1ecd24c19792439dfc7800454d 603 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 599 8.5E-293 T 14-10-2018 IPR017535 Asparagine synthase family amidotransferase TMO_1373 b71f4d0ec34355e5e3f00ffaf63296a4 498 Gene3D G3DSA:3.40.605.10 24 459 2.9E-147 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_1373 b71f4d0ec34355e5e3f00ffaf63296a4 498 SUPERFAMILY SSF53720 2 482 1.57E-146 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_1373 b71f4d0ec34355e5e3f00ffaf63296a4 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_1373 b71f4d0ec34355e5e3f00ffaf63296a4 498 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 7.3E-206 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 TMO_1373 b71f4d0ec34355e5e3f00ffaf63296a4 498 Pfam PF00171 Aldehyde dehydrogenase family 16 477 1.4E-137 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_1373 b71f4d0ec34355e5e3f00ffaf63296a4 498 Gene3D G3DSA:3.40.309.10 250 451 2.9E-147 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_0615 61637bd32749e9849edc408b5643b865 248 SUPERFAMILY SSF53335 29 248 4.56E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0615 61637bd32749e9849edc408b5643b865 248 Pfam PF13649 Methyltransferase domain 68 164 1.2E-10 T 14-10-2018 TMO_0615 61637bd32749e9849edc408b5643b865 248 Gene3D G3DSA:3.40.50.150 26 248 2.2E-43 T 14-10-2018 TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 Pfam PF00042 Globin 7 101 8.5E-8 T 14-10-2018 IPR000971 Globin GO:0020037 TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 7.0E-10 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 Pfam PF00970 Oxidoreductase FAD-binding domain 158 252 5.8E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 Gene3D G3DSA:2.40.30.10 150 253 7.8E-30 T 14-10-2018 TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 Gene3D G3DSA:1.10.490.10 1 143 1.1E-52 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 SUPERFAMILY SSF63380 149 253 5.2E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 PRINTS PR00409 Phthalate dioxygenase reductase family signature 226 240 4.2E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 PRINTS PR00409 Phthalate dioxygenase reductase family signature 178 188 4.2E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 PRINTS PR00409 Phthalate dioxygenase reductase family signature 263 282 4.2E-8 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 SUPERFAMILY SSF46458 1 134 2.99E-37 T 14-10-2018 IPR009050 Globin-like superfamily TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 Gene3D G3DSA:3.40.50.80 256 394 3.1E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_2016 b3dd1ac179a9740c5e53dfe2d83ae1ab 401 SUPERFAMILY SSF52343 255 392 3.4E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_3328 3d5702b1b004b384908edf6be54b8cff 360 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 11 358 4.0E-110 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 TMO_3328 3d5702b1b004b384908edf6be54b8cff 360 SUPERFAMILY SSF51395 9 359 6.11E-98 T 14-10-2018 TMO_3328 3d5702b1b004b384908edf6be54b8cff 360 Gene3D G3DSA:3.20.20.70 6 360 1.9E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3328 3d5702b1b004b384908edf6be54b8cff 360 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 83 102 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 TMO_3328 3d5702b1b004b384908edf6be54b8cff 360 Pfam PF01180 Dihydroorotate dehydrogenase 50 343 2.0E-90 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TMO_3328 3d5702b1b004b384908edf6be54b8cff 360 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 4 340 41.031 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 TMO_3328 3d5702b1b004b384908edf6be54b8cff 360 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 296 316 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PIRSF PIRSF036934 1 720 1.9E-304 T 14-10-2018 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 Pfam PF00117 Glutamine amidotransferase class-I 534 706 4.0E-33 T 14-10-2018 IPR017926 Glutamine amidotransferase TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 TIGRFAM TIGR01815 TrpE-clade3: anthranilate synthase 12 716 1.1E-295 T 14-10-2018 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 SUPERFAMILY SSF56322 18 512 6.54E-117 T 14-10-2018 IPR005801 ADC synthase GO:0009058 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 692 705 3.8E-21 T 14-10-2018 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 576 585 3.8E-21 T 14-10-2018 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 603 614 3.8E-21 T 14-10-2018 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 628 636 3.8E-21 T 14-10-2018 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 649 661 3.8E-21 T 14-10-2018 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 532 546 3.8E-21 T 14-10-2018 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 Gene3D G3DSA:3.60.120.10 23 519 3.2E-119 T 14-10-2018 IPR005801 ADC synthase GO:0009058 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 SUPERFAMILY SSF52317 530 705 1.56E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 Gene3D G3DSA:3.40.50.880 530 719 3.1E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00096 Glutamine amidotransferase superfamily signature 692 705 1.5E-8 T 14-10-2018 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00096 Glutamine amidotransferase superfamily signature 576 585 1.5E-8 T 14-10-2018 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00096 Glutamine amidotransferase superfamily signature 603 614 1.5E-8 T 14-10-2018 TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 Pfam PF00425 chorismate binding enzyme 251 503 1.6E-65 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal TMO_1258 3e0ec5fc3f018f89efe0db43f4a59cd0 720 Pfam PF04715 Anthranilate synthase component I, N terminal region 45 209 3.7E-9 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 Gene3D G3DSA:3.40.50.720 9 247 4.4E-71 T 14-10-2018 TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 Pfam PF00106 short chain dehydrogenase 13 200 1.3E-56 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 PIRSF PIRSF000126 6 249 1.9E-50 T 14-10-2018 TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 3.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 185 0.0021 T 14-10-2018 TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 SUPERFAMILY SSF51735 9 235 7.02E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1287 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0298 8c31a25605bd2f8e19bcc60a7470d927 326 SUPERFAMILY SSF48179 190 312 9.86E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_0298 8c31a25605bd2f8e19bcc60a7470d927 326 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 28 189 3.0E-43 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 TMO_0298 8c31a25605bd2f8e19bcc60a7470d927 326 PIRSF PIRSF000103 23 320 5.8E-70 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 TMO_0298 8c31a25605bd2f8e19bcc60a7470d927 326 Gene3D G3DSA:3.40.50.720 25 189 1.5E-48 T 14-10-2018 TMO_0298 8c31a25605bd2f8e19bcc60a7470d927 326 SUPERFAMILY SSF51735 28 189 4.16E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0298 8c31a25605bd2f8e19bcc60a7470d927 326 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 192 309 4.8E-25 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 TMO_0298 8c31a25605bd2f8e19bcc60a7470d927 326 Gene3D G3DSA:1.10.1040.10 190 315 4.3E-32 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_0298 8c31a25605bd2f8e19bcc60a7470d927 326 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 31 44 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 TMO_1147 7d80c71cc9175d652dcce7e9ae6b9235 509 SUPERFAMILY SSF52540 273 492 3.34E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1147 7d80c71cc9175d652dcce7e9ae6b9235 509 SMART SM00382 37 225 1.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1147 7d80c71cc9175d652dcce7e9ae6b9235 509 SMART SM00382 284 482 4.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1147 7d80c71cc9175d652dcce7e9ae6b9235 509 Gene3D G3DSA:3.40.50.300 1 242 2.2E-55 T 14-10-2018 TMO_1147 7d80c71cc9175d652dcce7e9ae6b9235 509 Gene3D G3DSA:3.40.50.300 266 507 3.7E-42 T 14-10-2018 TMO_1147 7d80c71cc9175d652dcce7e9ae6b9235 509 Pfam PF00005 ABC transporter 28 177 2.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1147 7d80c71cc9175d652dcce7e9ae6b9235 509 Pfam PF00005 ABC transporter 276 433 2.8E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1147 7d80c71cc9175d652dcce7e9ae6b9235 509 SUPERFAMILY SSF52540 11 232 6.89E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0270 cfbc83a4d865be0047444e53cd0f5383 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 270 1.3E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_a0270 cfbc83a4d865be0047444e53cd0f5383 371 SUPERFAMILY SSF111369 61 273 1.7E-14 T 14-10-2018 TMO_a0270 cfbc83a4d865be0047444e53cd0f5383 371 Gene3D G3DSA:2.40.420.20 290 361 2.4E-54 T 14-10-2018 TMO_a0270 cfbc83a4d865be0047444e53cd0f5383 371 Gene3D G3DSA:1.10.287.470 102 175 2.4E-54 T 14-10-2018 TMO_a0270 cfbc83a4d865be0047444e53cd0f5383 371 Gene3D G3DSA:2.40.50.100 68 215 2.4E-54 T 14-10-2018 TMO_a0270 cfbc83a4d865be0047444e53cd0f5383 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 58 363 2.1E-55 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_a0270 cfbc83a4d865be0047444e53cd0f5383 371 Gene3D G3DSA:2.40.30.170 56 289 2.4E-54 T 14-10-2018 TMO_0399 d686136ff0176e227d4a1dc68d1da77d 355 SUPERFAMILY SSF53850 45 353 4.8E-49 T 14-10-2018 TMO_0399 d686136ff0176e227d4a1dc68d1da77d 355 Pfam PF16868 NMT1-like family 51 351 3.1E-44 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_0399 d686136ff0176e227d4a1dc68d1da77d 355 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 25 351 2.4E-44 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_0399 d686136ff0176e227d4a1dc68d1da77d 355 Gene3D G3DSA:3.40.190.10 51 351 3.9E-62 T 14-10-2018 TMO_0399 d686136ff0176e227d4a1dc68d1da77d 355 Gene3D G3DSA:3.40.190.10 139 288 3.9E-62 T 14-10-2018 TMO_2969 6b5edcdd98b1a68b20d0f230caa96b27 447 Gene3D G3DSA:3.40.605.10 42 443 7.7E-156 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_2969 6b5edcdd98b1a68b20d0f230caa96b27 447 Pfam PF00171 Aldehyde dehydrogenase family 28 311 4.0E-13 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_2969 6b5edcdd98b1a68b20d0f230caa96b27 447 Gene3D G3DSA:3.40.309.10 256 404 7.7E-156 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_2969 6b5edcdd98b1a68b20d0f230caa96b27 447 PIRSF PIRSF000151 29 447 2.9E-169 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 TMO_2969 6b5edcdd98b1a68b20d0f230caa96b27 447 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 43 436 2.3E-133 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TMO_2969 6b5edcdd98b1a68b20d0f230caa96b27 447 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 353 374 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TMO_2969 6b5edcdd98b1a68b20d0f230caa96b27 447 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 35 446 39.897 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TMO_2969 6b5edcdd98b1a68b20d0f230caa96b27 447 SUPERFAMILY SSF53720 36 445 1.22E-113 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_c0786 735fa7f21e7e82eb6eadd1d329a161a8 576 Pfam PF13193 AMP-binding enzyme C-terminal domain 480 554 5.1E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0786 735fa7f21e7e82eb6eadd1d329a161a8 576 Pfam PF00501 AMP-binding enzyme 42 469 5.5E-109 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0786 735fa7f21e7e82eb6eadd1d329a161a8 576 Gene3D G3DSA:3.30.300.310 466 571 5.4E-27 T 14-10-2018 TMO_c0786 735fa7f21e7e82eb6eadd1d329a161a8 576 ProSitePatterns PS00455 Putative AMP-binding domain signature. 221 232 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0786 735fa7f21e7e82eb6eadd1d329a161a8 576 SUPERFAMILY SSF56801 21 566 4.45E-151 T 14-10-2018 TMO_c0786 735fa7f21e7e82eb6eadd1d329a161a8 576 Gene3D G3DSA:3.40.50.12780 27 461 9.6E-123 T 14-10-2018 TMO_1814 e7cef6f862eae2d2ca61a5de973a23c8 201 Pfam PF03981 Ubiquinol-cytochrome C chaperone 35 180 1.4E-41 T 14-10-2018 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 TMO_1814 e7cef6f862eae2d2ca61a5de973a23c8 201 PIRSF PIRSF032079 1 187 5.8E-54 T 14-10-2018 IPR014569 Ubiquinol-cytochrome c chaperone, CBP3-related TMO_b0156 b56906d58a94d86ba6bfc5e8410ba525 593 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 205 333 1.5E-28 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TMO_b0156 b56906d58a94d86ba6bfc5e8410ba525 593 SUPERFAMILY SSF52467 196 364 5.97E-42 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_b0156 b56906d58a94d86ba6bfc5e8410ba525 593 Gene3D G3DSA:3.40.50.970 3 184 5.6E-55 T 14-10-2018 TMO_b0156 b56906d58a94d86ba6bfc5e8410ba525 593 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 541 6.5E-36 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_b0156 b56906d58a94d86ba6bfc5e8410ba525 593 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 176 4.3E-45 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TMO_b0156 b56906d58a94d86ba6bfc5e8410ba525 593 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TMO_b0156 b56906d58a94d86ba6bfc5e8410ba525 593 SUPERFAMILY SSF52518 7 183 1.08E-43 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_b0156 b56906d58a94d86ba6bfc5e8410ba525 593 Gene3D G3DSA:3.40.50.970 350 564 4.4E-58 T 14-10-2018 TMO_b0156 b56906d58a94d86ba6bfc5e8410ba525 593 Gene3D G3DSA:3.40.50.1220 195 348 5.5E-44 T 14-10-2018 TMO_b0156 b56906d58a94d86ba6bfc5e8410ba525 593 SUPERFAMILY SSF52518 371 562 8.76E-58 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_1762 9558a9f1da4864b957bdcdc5e9234134 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 172 2.5E-36 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1762 9558a9f1da4864b957bdcdc5e9234134 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 405 1.9E-14 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1762 9558a9f1da4864b957bdcdc5e9234134 411 Pfam PF00994 Probable molybdopterin binding domain 185 320 4.2E-24 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_1762 9558a9f1da4864b957bdcdc5e9234134 411 SUPERFAMILY SSF63882 1 181 9.03E-45 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1762 9558a9f1da4864b957bdcdc5e9234134 411 SUPERFAMILY SSF53218 182 326 4.19E-39 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_1762 9558a9f1da4864b957bdcdc5e9234134 411 Gene3D G3DSA:3.40.980.10 180 331 1.8E-115 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_1762 9558a9f1da4864b957bdcdc5e9234134 411 Gene3D G3DSA:2.170.190.11 44 146 1.8E-115 T 14-10-2018 TMO_1762 9558a9f1da4864b957bdcdc5e9234134 411 Gene3D G3DSA:3.90.105.10 21 179 1.8E-115 T 14-10-2018 TMO_1762 9558a9f1da4864b957bdcdc5e9234134 411 Gene3D G3DSA:2.40.340.10 332 402 1.8E-115 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1762 9558a9f1da4864b957bdcdc5e9234134 411 SMART SM00852 185 322 2.4E-36 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_1762 9558a9f1da4864b957bdcdc5e9234134 411 SUPERFAMILY SSF63867 335 409 6.41E-16 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1469 6f641e7372c5e5f76d238ca05eeac821 616 Gene3D G3DSA:3.40.50.740 403 517 1.5E-8 T 14-10-2018 TMO_1469 6f641e7372c5e5f76d238ca05eeac821 616 SUPERFAMILY SSF53706 107 528 1.45E-27 T 14-10-2018 TMO_1469 6f641e7372c5e5f76d238ca05eeac821 616 Gene3D G3DSA:2.20.25.90 104 164 7.2E-6 T 14-10-2018 TMO_1469 6f641e7372c5e5f76d238ca05eeac821 616 TIGRFAM TIGR04519 MoCo_extend_TAT: MoCo/4Fe-4S cofactor protein extended Tat translocation domain 31 69 7.4E-11 T 14-10-2018 IPR030948 MoCo/4Fe-4S cofactor protein extended Tat translocation domain TMO_1169 61f64cff510e2e5a704bf80aa8d8b2bd 563 Pfam PF12804 MobA-like NTP transferase domain 354 516 8.0E-40 T 14-10-2018 IPR025877 MobA-like NTP transferase TMO_1169 61f64cff510e2e5a704bf80aa8d8b2bd 563 SUPERFAMILY SSF53448 351 538 1.43E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_1169 61f64cff510e2e5a704bf80aa8d8b2bd 563 PIRSF PIRSF036626 1 547 1.6E-162 T 14-10-2018 IPR012184 Bifunctional molybdopterin binding protein /nucleotidyl transferase, putative TMO_1169 61f64cff510e2e5a704bf80aa8d8b2bd 563 Gene3D G3DSA:3.40.980.10 150 306 9.7E-15 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_1169 61f64cff510e2e5a704bf80aa8d8b2bd 563 SUPERFAMILY SSF53218 182 302 1.17E-15 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_1169 61f64cff510e2e5a704bf80aa8d8b2bd 563 Gene3D G3DSA:3.90.550.10 348 545 5.3E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_2992 347a7c9877a05afe6d4665a51d353441 340 Gene3D G3DSA:1.10.443.10 132 315 2.6E-43 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TMO_2992 347a7c9877a05afe6d4665a51d353441 340 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 19 322 47.193 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD TMO_2992 347a7c9877a05afe6d4665a51d353441 340 Pfam PF00589 Phage integrase family 146 307 1.6E-31 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_2992 347a7c9877a05afe6d4665a51d353441 340 Gene3D G3DSA:1.10.150.130 17 113 3.4E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal TMO_2992 347a7c9877a05afe6d4665a51d353441 340 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 22 104 3.6E-15 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TMO_2992 347a7c9877a05afe6d4665a51d353441 340 SUPERFAMILY SSF56349 129 320 7.95E-44 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_2992 347a7c9877a05afe6d4665a51d353441 340 SUPERFAMILY SSF47823 20 107 1.79E-13 T 14-10-2018 TMO_2642 62fe13f24a78c3bee16d657d46675f2c 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 26.254 T 14-10-2018 IPR022973 Ribosomal protein L10 TMO_2642 62fe13f24a78c3bee16d657d46675f2c 172 Pfam PF00466 Ribosomal protein L10 3 98 1.6E-24 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 TMO_2642 62fe13f24a78c3bee16d657d46675f2c 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 2 168 5.0E-8 T 14-10-2018 TMO_2642 62fe13f24a78c3bee16d657d46675f2c 172 Gene3D G3DSA:3.30.70.1730 1 131 8.8E-37 T 14-10-2018 TMO_2642 62fe13f24a78c3bee16d657d46675f2c 172 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2642 62fe13f24a78c3bee16d657d46675f2c 172 SUPERFAMILY SSF160369 3 168 2.22E-56 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 SUPERFAMILY SSF56784 435 743 1.77E-54 T 14-10-2018 IPR036412 HAD-like superfamily TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 162 745 2.1E-182 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 Gene3D G3DSA:3.40.1110.10 448 568 6.3E-87 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 439 445 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 SUPERFAMILY SSF81653 238 335 2.48E-26 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00943 Copper-transporting ATPase signature 420 435 5.6E-15 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00943 Copper-transporting ATPase signature 613 630 5.6E-15 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00943 Copper-transporting ATPase signature 709 723 5.6E-15 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00943 Copper-transporting ATPase signature 204 223 5.6E-15 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00943 Copper-transporting ATPase signature 147 166 5.6E-15 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00943 Copper-transporting ATPase signature 224 242 5.6E-15 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00943 Copper-transporting ATPase signature 358 372 5.6E-15 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 655 2.2E-29 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 561 572 2.2E-29 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 583 593 2.2E-29 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 437 451 2.2E-29 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 285 299 2.2E-29 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 659 671 2.2E-29 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 SUPERFAMILY SSF81660 449 570 8.83E-28 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 143 746 9.6E-173 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 206 714 2.4E-88 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 Gene3D G3DSA:3.40.50.1000 418 687 6.3E-87 T 14-10-2018 IPR023214 HAD superfamily TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 Pfam PF00122 E1-E2 ATPase 235 416 4.0E-55 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 SUPERFAMILY SSF81665 203 431 2.22E-12 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 Pfam PF00702 haloacid dehalogenase-like hydrolase 433 650 6.9E-40 T 14-10-2018 TMO_c0009 059382a7cd4f7abf500597275b7ef993 750 Gene3D G3DSA:2.70.150.20 228 340 1.0E-43 T 14-10-2018 TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 207 281 8.6E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 111 192 4.2E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 PIRSF PIRSF000006 2 288 2.6E-91 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 13 56 6.7E-19 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 Gene3D G3DSA:1.20.58.1490 2 69 8.8E-17 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 Gene3D G3DSA:1.10.760.10 173 261 5.8E-64 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 PRINTS PR00605 Class IC cytochrome C signature 259 281 7.1E-8 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 PRINTS PR00605 Class IC cytochrome C signature 215 226 7.1E-8 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 SUPERFAMILY SSF46626 204 287 2.33E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 Gene3D G3DSA:1.10.760.10 82 284 5.8E-64 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 12 288 2.2E-87 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III TMO_2282 edd8ca67c489f23e5f7acd351ce1845c 289 SUPERFAMILY SSF46626 31 199 8.27E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_0018 1f23c74475c31ce9287ff525c9ce2998 356 Pfam PF00005 ABC transporter 22 163 7.4E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0018 1f23c74475c31ce9287ff525c9ce2998 356 Pfam PF08402 TOBE domain 280 353 4.6E-15 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_0018 1f23c74475c31ce9287ff525c9ce2998 356 Gene3D G3DSA:2.40.50.140 241 282 9.4E-9 T 14-10-2018 TMO_0018 1f23c74475c31ce9287ff525c9ce2998 356 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 36 353 7.4E-119 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 TMO_0018 1f23c74475c31ce9287ff525c9ce2998 356 SUPERFAMILY SSF50331 238 353 2.47E-20 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_0018 1f23c74475c31ce9287ff525c9ce2998 356 Gene3D G3DSA:3.40.50.300 1 240 8.3E-82 T 14-10-2018 TMO_0018 1f23c74475c31ce9287ff525c9ce2998 356 SMART SM00382 30 213 1.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0018 1f23c74475c31ce9287ff525c9ce2998 356 SUPERFAMILY SSF52540 6 242 1.17E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0018 1f23c74475c31ce9287ff525c9ce2998 356 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0018 1f23c74475c31ce9287ff525c9ce2998 356 Gene3D G3DSA:2.40.50.100 283 347 9.4E-9 T 14-10-2018 TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 SUPERFAMILY SSF51735 4 250 4.26E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 Gene3D G3DSA:3.40.50.720 3 251 8.0E-55 T 14-10-2018 TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 Pfam PF00106 short chain dehydrogenase 9 198 4.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1856 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3522 afcdd48e6efd98095dd0b9e68eba8af3 501 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 73 306 1.1E-43 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase TMO_3522 afcdd48e6efd98095dd0b9e68eba8af3 501 Gene3D G3DSA:3.40.50.10330 9 139 1.1E-22 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 TMO_3522 afcdd48e6efd98095dd0b9e68eba8af3 501 SMART SM00046 14 142 4.0E-4 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 TMO_3522 afcdd48e6efd98095dd0b9e68eba8af3 501 Pfam PF00781 Diacylglycerol kinase catalytic domain 32 139 9.0E-20 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 TMO_3522 afcdd48e6efd98095dd0b9e68eba8af3 501 Gene3D G3DSA:2.60.200.40 140 296 1.8E-44 T 14-10-2018 TMO_3522 afcdd48e6efd98095dd0b9e68eba8af3 501 SUPERFAMILY SSF111331 12 307 8.94E-73 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily TMO_3250 951d4de4df4e99c3dfc17ed643a9be75 255 SUPERFAMILY SSF75217 19 246 9.16E-91 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases TMO_3250 951d4de4df4e99c3dfc17ed643a9be75 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 97.36 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TMO_3250 951d4de4df4e99c3dfc17ed643a9be75 255 Gene3D G3DSA:1.10.1270.20 191 250 3.0E-28 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TMO_3250 951d4de4df4e99c3dfc17ed643a9be75 255 PIRSF PIRSF000386 19 250 2.6E-88 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TMO_3250 951d4de4df4e99c3dfc17ed643a9be75 255 Gene3D G3DSA:3.40.1280.10 20 190 1.8E-58 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_3250 951d4de4df4e99c3dfc17ed643a9be75 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 22 245 1.8E-76 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TMO_3250 951d4de4df4e99c3dfc17ed643a9be75 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 41 238 1.9E-51 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TMO_a0370 682bd5f6e00ed8180595fc48acb672d2 663 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 128 146 2.2E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 TMO_a0370 682bd5f6e00ed8180595fc48acb672d2 663 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 186 199 2.2E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 TMO_a0370 682bd5f6e00ed8180595fc48acb672d2 663 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 60 73 2.2E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 TMO_a0370 682bd5f6e00ed8180595fc48acb672d2 663 Pfam PF01867 CRISPR associated protein Cas1 319 581 4.2E-57 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TMO_a0370 682bd5f6e00ed8180595fc48acb672d2 663 Gene3D G3DSA:1.20.120.920 402 663 4.2E-55 T 14-10-2018 TMO_a0370 682bd5f6e00ed8180595fc48acb672d2 663 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 73 652 18.253 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TMO_a0370 682bd5f6e00ed8180595fc48acb672d2 663 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 65 269 5.6E-35 T 14-10-2018 IPR000477 Reverse transcriptase domain TMO_a0370 682bd5f6e00ed8180595fc48acb672d2 663 SUPERFAMILY SSF56672 14 279 2.41E-34 T 14-10-2018 TMO_a0370 682bd5f6e00ed8180595fc48acb672d2 663 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 319 581 6.2E-50 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TMO_c0271 fdfb7d74739286f0ce6e3ba1144b2abb 308 Gene3D G3DSA:1.10.1040.10 175 306 3.2E-23 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_c0271 fdfb7d74739286f0ce6e3ba1144b2abb 308 SUPERFAMILY SSF48179 176 299 1.29E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_c0271 fdfb7d74739286f0ce6e3ba1144b2abb 308 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 176 293 1.5E-22 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain TMO_c0271 fdfb7d74739286f0ce6e3ba1144b2abb 308 Gene3D G3DSA:3.40.50.720 1 171 4.7E-50 T 14-10-2018 TMO_c0271 fdfb7d74739286f0ce6e3ba1144b2abb 308 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 147 7.3E-34 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain TMO_c0271 fdfb7d74739286f0ce6e3ba1144b2abb 308 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 302 2.4E-62 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 TMO_c0271 fdfb7d74739286f0ce6e3ba1144b2abb 308 SUPERFAMILY SSF51735 1 129 4.97E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3032 9532ecb80ddd67dc4ad0769804ccf3ee 140 SUPERFAMILY SSF54637 7 138 1.29E-23 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_3032 9532ecb80ddd67dc4ad0769804ccf3ee 140 Pfam PF03061 Thioesterase superfamily 54 130 9.6E-12 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_3032 9532ecb80ddd67dc4ad0769804ccf3ee 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 137 1.4E-17 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_3032 9532ecb80ddd67dc4ad0769804ccf3ee 140 Gene3D G3DSA:3.10.129.10 13 140 8.3E-30 T 14-10-2018 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 300 2.8E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 Gene3D G3DSA:3.40.50.2300 484 613 3.9E-41 T 14-10-2018 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 SUPERFAMILY SSF47226 587 715 5.55E-8 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 1.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 1.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 Gene3D G3DSA:3.30.565.10 299 460 5.4E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 457 1.1E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 Gene3D G3DSA:1.10.287.130 210 298 5.3E-25 T 14-10-2018 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 SUPERFAMILY SSF55874 289 455 1.44E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 SUPERFAMILY SSF47384 218 301 9.61E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 Gene3D G3DSA:1.20.120.160 635 737 6.7E-5 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 Pfam PF00072 Response regulator receiver domain 491 604 1.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 SMART SM00448 489 604 4.2E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 SMART SM00387 348 459 1.7E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 SUPERFAMILY SSF52172 487 618 7.83E-40 T 14-10-2018 IPR011006 CheY-like superfamily TMO_c0524 4fbd3f189e18b87345ea31e48c6b0847 749 SMART SM00388 234 300 2.0E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_3280 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 175 1.0E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_3280 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 Pfam PF00593 TonB dependent receptor 317 717 1.3E-39 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_3280 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 SUPERFAMILY SSF56935 45 719 9.16E-105 T 14-10-2018 TMO_3280 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 702 719 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site TMO_3280 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 Gene3D G3DSA:2.40.170.20 59 719 5.3E-131 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_b0081 71115fe5a6ad35de98daa6e0f4395281 535 SUPERFAMILY SSF81296 148 277 1.02E-25 T 14-10-2018 IPR014756 Immunoglobulin E-set TMO_b0081 71115fe5a6ad35de98daa6e0f4395281 535 Gene3D G3DSA:2.60.40.10 146 265 5.6E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold TMO_b0081 71115fe5a6ad35de98daa6e0f4395281 535 Pfam PF11806 Domain of unknown function (DUF3327) 176 281 1.0E-18 T 14-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 TMO_b0081 71115fe5a6ad35de98daa6e0f4395281 535 Pfam PF00756 Putative esterase 300 526 1.4E-31 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 TMO_b0081 71115fe5a6ad35de98daa6e0f4395281 535 Gene3D G3DSA:3.40.50.1820 273 532 1.7E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0081 71115fe5a6ad35de98daa6e0f4395281 535 SUPERFAMILY SSF53474 286 531 4.05E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3426 69f613d16383256648fc688456db3467 365 Gene3D G3DSA:2.40.160.10 29 365 1.5E-48 T 14-10-2018 IPR023614 Porin domain superfamily TMO_3426 69f613d16383256648fc688456db3467 365 SUPERFAMILY SSF56935 22 365 2.56E-32 T 14-10-2018 TMO_3426 69f613d16383256648fc688456db3467 365 Pfam PF13609 Gram-negative porin 10 345 3.0E-47 T 14-10-2018 TMO_c0251 ed460f6035bd474ed1ccddaae64b99db 263 Gene3D G3DSA:3.40.80.10 15 171 1.6E-51 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 TMO_c0251 ed460f6035bd474ed1ccddaae64b99db 263 Gene3D G3DSA:1.10.101.10 182 257 7.1E-13 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 TMO_c0251 ed460f6035bd474ed1ccddaae64b99db 263 SUPERFAMILY SSF47090 186 250 4.32E-12 T 14-10-2018 IPR036365 PGBD-like superfamily TMO_c0251 ed460f6035bd474ed1ccddaae64b99db 263 Pfam PF01471 Putative peptidoglycan binding domain 195 248 6.7E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like TMO_c0251 ed460f6035bd474ed1ccddaae64b99db 263 SMART SM00644 22 159 3.0E-44 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 TMO_c0251 ed460f6035bd474ed1ccddaae64b99db 263 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 159 2.5E-30 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 TMO_c0251 ed460f6035bd474ed1ccddaae64b99db 263 SUPERFAMILY SSF55846 20 173 1.57E-54 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 TMO_c0500 00c49ac634cf9a4ba814d63ec1690b03 335 SUPERFAMILY SSF52768 16 326 4.32E-94 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily TMO_c0500 00c49ac634cf9a4ba814d63ec1690b03 335 Pfam PF00491 Arginase family 50 321 2.2E-85 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 TMO_c0500 00c49ac634cf9a4ba814d63ec1690b03 335 Gene3D G3DSA:3.40.800.10 14 331 7.3E-114 T 14-10-2018 TMO_c0500 00c49ac634cf9a4ba814d63ec1690b03 335 PRINTS PR00116 Arginase signature 136 151 1.4E-13 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 TMO_c0500 00c49ac634cf9a4ba814d63ec1690b03 335 PRINTS PR00116 Arginase signature 249 278 1.4E-13 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 TMO_c0500 00c49ac634cf9a4ba814d63ec1690b03 335 TIGRFAM TIGR01230 agmatinase: agmatinase 48 322 3.1E-56 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 TMO_c0500 00c49ac634cf9a4ba814d63ec1690b03 335 PIRSF PIRSF036979 30 327 9.6E-88 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 TMO_c0500 00c49ac634cf9a4ba814d63ec1690b03 335 ProSitePatterns PS01053 Arginase family signature. 252 273 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 TMO_1718 544e32a558a2a67dd52402df15b79a88 297 Gene3D G3DSA:1.10.10.10 1 82 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1718 544e32a558a2a67dd52402df15b79a88 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1718 544e32a558a2a67dd52402df15b79a88 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1718 544e32a558a2a67dd52402df15b79a88 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1718 544e32a558a2a67dd52402df15b79a88 297 SUPERFAMILY SSF53850 88 281 1.34E-23 T 14-10-2018 TMO_1718 544e32a558a2a67dd52402df15b79a88 297 SUPERFAMILY SSF46785 2 102 5.08E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1718 544e32a558a2a67dd52402df15b79a88 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.8E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1718 544e32a558a2a67dd52402df15b79a88 297 Pfam PF03466 LysR substrate binding domain 86 262 6.3E-27 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1718 544e32a558a2a67dd52402df15b79a88 297 Gene3D G3DSA:3.40.190.10 161 258 4.8E-29 T 14-10-2018 TMO_1718 544e32a558a2a67dd52402df15b79a88 297 Gene3D G3DSA:3.40.190.10 91 261 4.8E-29 T 14-10-2018 TMO_2670 4fc07f958abbe2c1fff157c4ac0e84f4 493 SUPERFAMILY SSF52200 35 148 8.37E-9 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TMO_2670 4fc07f958abbe2c1fff157c4ac0e84f4 493 Pfam PF13676 TIR domain 36 146 7.4E-16 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_2670 4fc07f958abbe2c1fff157c4ac0e84f4 493 Gene3D G3DSA:3.40.50.10140 33 155 1.1E-13 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TMO_c0477 b1c35996f94ad64e1773b6cfa97c9ac2 288 Gene3D G3DSA:3.40.50.300 10 288 7.6E-44 T 14-10-2018 TMO_c0477 b1c35996f94ad64e1773b6cfa97c9ac2 288 SUPERFAMILY SSF52540 5 287 7.59E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0477 b1c35996f94ad64e1773b6cfa97c9ac2 288 Pfam PF00685 Sulfotransferase domain 13 286 3.7E-24 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 SUPERFAMILY SSF55785 99 209 1.95E-15 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 214 335 1.3E-14 T 14-10-2018 IPR000014 PAS domain TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 93 209 3.8E-10 T 14-10-2018 IPR000014 PAS domain TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 Gene3D G3DSA:1.10.287.130 329 415 1.5E-29 T 14-10-2018 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 Gene3D G3DSA:3.30.565.10 416 576 6.0E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 573 3.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 515 3.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 554 3.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 350 417 1.1E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 SUPERFAMILY SSF47384 333 418 7.26E-25 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 463 574 5.9E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 SMART SM00387 463 576 2.1E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 Pfam PF08448 PAS fold 94 204 6.7E-9 T 14-10-2018 IPR013656 PAS fold-4 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 Gene3D G3DSA:3.30.450.20 216 328 3.7E-19 T 14-10-2018 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 SMART SM00388 349 417 4.2E-26 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 SMART SM00091 81 154 0.76 T 14-10-2018 IPR000014 PAS domain TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 SMART SM00091 215 281 1.6E-8 T 14-10-2018 IPR000014 PAS domain TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 SMART SM00086 288 329 21.0 T 14-10-2018 IPR001610 PAC motif TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 SMART SM00086 160 203 0.97 T 14-10-2018 IPR001610 PAC motif TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 Gene3D G3DSA:3.30.450.20 93 215 5.3E-15 T 14-10-2018 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 SUPERFAMILY SSF55785 200 327 4.71E-20 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 Pfam PF08447 PAS fold 238 310 1.1E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_1930 d86e3d2547ad1c43aa7dac6808188886 600 SUPERFAMILY SSF55874 406 574 4.06E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_d0066 54d1cdff27836830bd414198f36c794d 322 Gene3D G3DSA:1.10.20.140 121 190 9.0E-74 T 14-10-2018 TMO_d0066 54d1cdff27836830bd414198f36c794d 322 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 14 306 23.862 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TMO_d0066 54d1cdff27836830bd414198f36c794d 322 SUPERFAMILY SSF52540 14 158 1.77E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_d0066 54d1cdff27836830bd414198f36c794d 322 Gene3D G3DSA:3.40.50.300 18 294 9.0E-74 T 14-10-2018 TMO_d0066 54d1cdff27836830bd414198f36c794d 322 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 14 294 1.9E-65 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TMO_d0066 54d1cdff27836830bd414198f36c794d 322 Pfam PF01715 IPP transferase 47 292 6.5E-58 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TMO_1025 a986a9b506e324046bbee3234e909c95 606 Pfam PF00005 ABC transporter 337 484 1.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1025 a986a9b506e324046bbee3234e909c95 606 SUPERFAMILY SSF52540 13 263 1.63E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1025 a986a9b506e324046bbee3234e909c95 606 ProSitePatterns PS00211 ABC transporters family signature. 457 471 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1025 a986a9b506e324046bbee3234e909c95 606 SUPERFAMILY SSF52540 311 556 6.48E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1025 a986a9b506e324046bbee3234e909c95 606 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1025 a986a9b506e324046bbee3234e909c95 606 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 275 1.5E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_1025 a986a9b506e324046bbee3234e909c95 606 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 536 570 3.2E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_1025 a986a9b506e324046bbee3234e909c95 606 Gene3D G3DSA:3.40.50.300 11 295 7.8E-81 T 14-10-2018 TMO_1025 a986a9b506e324046bbee3234e909c95 606 Gene3D G3DSA:3.40.50.300 308 598 2.7E-85 T 14-10-2018 TMO_1025 a986a9b506e324046bbee3234e909c95 606 Pfam PF00005 ABC transporter 34 191 2.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1025 a986a9b506e324046bbee3234e909c95 606 SMART SM00382 42 241 2.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1025 a986a9b506e324046bbee3234e909c95 606 SMART SM00382 345 534 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0528 7869b669ce4b403da5d50008a0235636 459 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_c0528 7869b669ce4b403da5d50008a0235636 459 SUPERFAMILY SSF52172 7 188 6.12E-43 T 14-10-2018 IPR011006 CheY-like superfamily TMO_c0528 7869b669ce4b403da5d50008a0235636 459 Pfam PF00158 Sigma-54 interaction domain 145 311 1.7E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_c0528 7869b669ce4b403da5d50008a0235636 459 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_c0528 7869b669ce4b403da5d50008a0235636 459 Gene3D G3DSA:1.10.8.60 316 381 2.9E-18 T 14-10-2018 TMO_c0528 7869b669ce4b403da5d50008a0235636 459 SMART SM00448 6 117 2.9E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0528 7869b669ce4b403da5d50008a0235636 459 SUPERFAMILY SSF46689 396 449 6.72E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0528 7869b669ce4b403da5d50008a0235636 459 SUPERFAMILY SSF52540 144 374 4.69E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0528 7869b669ce4b403da5d50008a0235636 459 Gene3D G3DSA:1.10.10.60 400 450 1.5E-8 T 14-10-2018 TMO_c0528 7869b669ce4b403da5d50008a0235636 459 Pfam PF02954 Bacterial regulatory protein, Fis family 407 446 1.5E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_c0528 7869b669ce4b403da5d50008a0235636 459 Gene3D G3DSA:3.40.50.2300 3 136 8.0E-38 T 14-10-2018 TMO_c0528 7869b669ce4b403da5d50008a0235636 459 Gene3D G3DSA:3.40.50.300 137 315 6.9E-61 T 14-10-2018 TMO_c0528 7869b669ce4b403da5d50008a0235636 459 Pfam PF00072 Response regulator receiver domain 8 117 2.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0528 7869b669ce4b403da5d50008a0235636 459 SMART SM00382 165 308 2.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0528 7869b669ce4b403da5d50008a0235636 459 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_1125 932fd2fc150685fa0734f0b35f0d77db 251 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 10 247 5.6E-54 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 TMO_1125 932fd2fc150685fa0734f0b35f0d77db 251 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 200 219 3.4E-20 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TMO_1125 932fd2fc150685fa0734f0b35f0d77db 251 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 18 39 3.4E-20 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TMO_1125 932fd2fc150685fa0734f0b35f0d77db 251 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 3.4E-20 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TMO_1125 932fd2fc150685fa0734f0b35f0d77db 251 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 178 200 3.4E-20 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TMO_1125 932fd2fc150685fa0734f0b35f0d77db 251 Pfam PF01311 Bacterial export proteins, family 1 10 241 1.1E-57 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TMO_3377 0486d5ec97c09d72211576b8e1332431 328 Pfam PF12852 Cupin 7 207 3.2E-33 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain TMO_3377 0486d5ec97c09d72211576b8e1332431 328 SUPERFAMILY SSF46689 275 323 3.36E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_3377 0486d5ec97c09d72211576b8e1332431 328 Pfam PF12833 Helix-turn-helix domain 245 323 1.6E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_3377 0486d5ec97c09d72211576b8e1332431 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 276 318 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_3377 0486d5ec97c09d72211576b8e1332431 328 SUPERFAMILY SSF46689 222 272 2.06E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_3377 0486d5ec97c09d72211576b8e1332431 328 SMART SM00342 239 322 5.5E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_3377 0486d5ec97c09d72211576b8e1332431 328 Gene3D G3DSA:1.10.10.60 224 326 1.3E-22 T 14-10-2018 TMO_1675 3f736b3b030f35f05ab0ffca3d7913c1 325 Pfam PF05036 Sporulation related domain 253 323 1.5E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 TMO_1675 3f736b3b030f35f05ab0ffca3d7913c1 325 Pfam PF03330 Lytic transglycolase 86 173 4.6E-23 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain TMO_1675 3f736b3b030f35f05ab0ffca3d7913c1 325 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 87 177 2.8E-43 T 14-10-2018 IPR012997 Rare lipoprotein A TMO_1675 3f736b3b030f35f05ab0ffca3d7913c1 325 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 9 177 25.108 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 TMO_1675 3f736b3b030f35f05ab0ffca3d7913c1 325 SUPERFAMILY SSF110997 249 319 7.32E-14 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TMO_1675 3f736b3b030f35f05ab0ffca3d7913c1 325 SUPERFAMILY SSF50685 74 172 3.45E-9 T 14-10-2018 IPR036908 RlpA-like domain superfamily TMO_1675 3f736b3b030f35f05ab0ffca3d7913c1 325 Gene3D G3DSA:3.30.70.1070 253 324 8.8E-12 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TMO_1675 3f736b3b030f35f05ab0ffca3d7913c1 325 Gene3D G3DSA:2.40.40.10 84 177 3.5E-36 T 14-10-2018 IPR036908 RlpA-like domain superfamily TMO_0820 bfc942bb1a840310af60e2727aed1da3 560 Gene3D G3DSA:3.40.50.300 3 289 1.2E-77 T 14-10-2018 TMO_0820 bfc942bb1a840310af60e2727aed1da3 560 Pfam PF12848 ABC transporter 234 306 2.5E-12 T 14-10-2018 IPR032781 ABC-transporter extension domain TMO_0820 bfc942bb1a840310af60e2727aed1da3 560 SMART SM00382 33 240 1.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0820 bfc942bb1a840310af60e2727aed1da3 560 SMART SM00382 352 528 1.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0820 bfc942bb1a840310af60e2727aed1da3 560 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0820 bfc942bb1a840310af60e2727aed1da3 560 Pfam PF00005 ABC transporter 25 195 5.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0820 bfc942bb1a840310af60e2727aed1da3 560 Gene3D G3DSA:3.40.50.300 290 557 6.7E-70 T 14-10-2018 TMO_0820 bfc942bb1a840310af60e2727aed1da3 560 SUPERFAMILY SSF52540 311 526 3.52E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0820 bfc942bb1a840310af60e2727aed1da3 560 SUPERFAMILY SSF52540 10 246 2.9E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0820 bfc942bb1a840310af60e2727aed1da3 560 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 5 557 3.9E-294 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 TMO_0820 bfc942bb1a840310af60e2727aed1da3 560 Pfam PF00005 ABC transporter 344 477 3.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0245 f2c370a602ecb5248c1163395e728956 485 Gene3D G3DSA:3.90.190.20 334 481 1.1E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TMO_c0245 f2c370a602ecb5248c1163395e728956 485 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 8 471 32.326 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0245 f2c370a602ecb5248c1163395e728956 485 SUPERFAMILY SSF53244 340 470 9.84E-34 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TMO_c0245 f2c370a602ecb5248c1163395e728956 485 Pfam PF01225 Mur ligase family, catalytic domain 28 102 5.0E-12 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TMO_c0245 f2c370a602ecb5248c1163395e728956 485 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 33 470 1.0E-111 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TMO_c0245 f2c370a602ecb5248c1163395e728956 485 SUPERFAMILY SSF63418 8 105 1.24E-22 T 14-10-2018 IPR035911 MurE/MurF, N-terminal TMO_c0245 f2c370a602ecb5248c1163395e728956 485 Pfam PF08245 Mur ligase middle domain 114 308 2.7E-37 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TMO_c0245 f2c370a602ecb5248c1163395e728956 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 342 412 3.3E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TMO_c0245 f2c370a602ecb5248c1163395e728956 485 Gene3D G3DSA:3.40.1190.10 90 327 3.3E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_c0245 f2c370a602ecb5248c1163395e728956 485 SUPERFAMILY SSF53623 110 325 1.06E-42 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_c0245 f2c370a602ecb5248c1163395e728956 485 Gene3D G3DSA:3.40.1390.10 6 83 2.0E-22 T 14-10-2018 TMO_b0127 b7e54a85654a7db1447fea7a194cf83d 391 SUPERFAMILY SSF55073 235 386 6.75E-43 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_b0127 b7e54a85654a7db1447fea7a194cf83d 391 Pfam PF00990 Diguanylate cyclase, GGDEF domain 230 384 1.5E-35 T 14-10-2018 IPR000160 GGDEF domain TMO_b0127 b7e54a85654a7db1447fea7a194cf83d 391 SMART SM00267 219 388 2.1E-48 T 14-10-2018 IPR000160 GGDEF domain TMO_b0127 b7e54a85654a7db1447fea7a194cf83d 391 Gene3D G3DSA:3.30.70.270 218 388 8.2E-52 T 14-10-2018 TMO_b0127 b7e54a85654a7db1447fea7a194cf83d 391 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 386 5.5E-36 T 14-10-2018 IPR000160 GGDEF domain TMO_0640 5dabda2515b27904fc0e7db92767ca5a 268 Gene3D G3DSA:3.40.1210.10 13 262 3.0E-80 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TMO_0640 5dabda2515b27904fc0e7db92767ca5a 268 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 13 267 32.135 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TMO_0640 5dabda2515b27904fc0e7db92767ca5a 268 Pfam PF01975 Survival protein SurE 15 197 9.3E-54 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TMO_0640 5dabda2515b27904fc0e7db92767ca5a 268 SUPERFAMILY SSF64167 14 261 4.84E-70 T 14-10-2018 TMO_0640 5dabda2515b27904fc0e7db92767ca5a 268 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 14 248 6.2E-54 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TMO_0924 76b147acc4f09556e60885f77c412599 249 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0924 76b147acc4f09556e60885f77c412599 249 Gene3D G3DSA:3.40.50.300 15 249 7.0E-54 T 14-10-2018 TMO_0924 76b147acc4f09556e60885f77c412599 249 SMART SM00382 43 228 1.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0924 76b147acc4f09556e60885f77c412599 249 SUPERFAMILY SSF52540 18 244 1.08E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0924 76b147acc4f09556e60885f77c412599 249 Pfam PF00005 ABC transporter 35 177 2.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1995 6ca4fa13334d757ab4573ba5b8c2c421 320 Gene3D G3DSA:1.10.10.10 3 93 8.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1995 6ca4fa13334d757ab4573ba5b8c2c421 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1995 6ca4fa13334d757ab4573ba5b8c2c421 320 Gene3D G3DSA:3.40.190.290 94 295 2.3E-36 T 14-10-2018 TMO_1995 6ca4fa13334d757ab4573ba5b8c2c421 320 Pfam PF03466 LysR substrate binding domain 90 289 4.8E-40 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1995 6ca4fa13334d757ab4573ba5b8c2c421 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1995 6ca4fa13334d757ab4573ba5b8c2c421 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1995 6ca4fa13334d757ab4573ba5b8c2c421 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1995 6ca4fa13334d757ab4573ba5b8c2c421 320 SUPERFAMILY SSF46785 2 112 2.18E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1995 6ca4fa13334d757ab4573ba5b8c2c421 320 SUPERFAMILY SSF53850 91 290 1.0E-40 T 14-10-2018 TMO_a0052 a007eb203dd63cb86ed8ce9e8daf5674 214 Pfam PF06055 Exopolysaccharide synthesis, ExoD 27 210 3.0E-49 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD TMO_a0052 a007eb203dd63cb86ed8ce9e8daf5674 214 PIRSF PIRSF033239 18 214 2.9E-50 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD TMO_b0266 084318cbc568ad9f0cef4e7e5b0d7cca 326 Gene3D G3DSA:1.10.3720.10 90 319 2.4E-31 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0266 084318cbc568ad9f0cef4e7e5b0d7cca 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 323 1.6E-47 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0266 084318cbc568ad9f0cef4e7e5b0d7cca 326 SUPERFAMILY SSF161098 98 310 2.88E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 Pfam PF07732 Multicopper oxidase 1 74 1.4E-27 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 ProSitePatterns PS00080 Multicopper oxidases signature 2. 514 525 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 Gene3D G3DSA:2.60.40.420 82 286 7.2E-40 T 14-10-2018 IPR008972 Cupredoxin TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 SUPERFAMILY SSF49503 1 105 4.47E-29 T 14-10-2018 IPR008972 Cupredoxin TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 ProSitePatterns PS00079 Multicopper oxidases signature 1. 509 529 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 SUPERFAMILY SSF49503 371 531 9.69E-34 T 14-10-2018 IPR008972 Cupredoxin TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 SUPERFAMILY SSF49503 80 294 6.91E-53 T 14-10-2018 IPR008972 Cupredoxin TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 ProSitePatterns PS00079 Multicopper oxidases signature 1. 49 69 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 Pfam PF00394 Multicopper oxidase 84 261 1.8E-28 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 1 531 4.9E-257 T 14-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 Gene3D G3DSA:2.60.40.420 411 532 2.0E-27 T 14-10-2018 IPR008972 Cupredoxin TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 Pfam PF07731 Multicopper oxidase 418 531 1.7E-22 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 TMO_c0012 4eb742548d46c70fb1b61d6e41eff68b 532 Gene3D G3DSA:2.60.40.420 1 73 9.0E-26 T 14-10-2018 IPR008972 Cupredoxin TMO_0961 021cdad32f7df1b283d3059add8c9f31 610 Pfam PF00664 ABC transporter transmembrane region 45 296 1.5E-6 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_0961 021cdad32f7df1b283d3059add8c9f31 610 Gene3D G3DSA:3.40.50.300 343 581 1.3E-71 T 14-10-2018 TMO_0961 021cdad32f7df1b283d3059add8c9f31 610 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0961 021cdad32f7df1b283d3059add8c9f31 610 SUPERFAMILY SSF52540 340 573 7.73E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0961 021cdad32f7df1b283d3059add8c9f31 610 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 35 575 9.9E-198 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 TMO_0961 021cdad32f7df1b283d3059add8c9f31 610 Gene3D G3DSA:1.20.1560.10 29 333 1.0E-27 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_0961 021cdad32f7df1b283d3059add8c9f31 610 SUPERFAMILY SSF90123 35 337 5.76E-38 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_0961 021cdad32f7df1b283d3059add8c9f31 610 SMART SM00382 375 568 5.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0961 021cdad32f7df1b283d3059add8c9f31 610 Pfam PF00005 ABC transporter 368 513 2.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1100 5f498f3b2f176480a6c28643f3846866 368 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 50 361 2.6E-88 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_1100 5f498f3b2f176480a6c28643f3846866 368 PIRSF PIRSF002888 11 368 4.9E-89 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_1100 5f498f3b2f176480a6c28643f3846866 368 Gene3D G3DSA:2.30.330.10 285 366 5.5E-7 T 14-10-2018 IPR036429 SpoA-like superfamily TMO_1100 5f498f3b2f176480a6c28643f3846866 368 Gene3D G3DSA:3.40.1550.10 84 270 9.3E-52 T 14-10-2018 IPR028976 CheC-like superfamily TMO_1100 5f498f3b2f176480a6c28643f3846866 368 Pfam PF02154 Flagellar motor switch protein FliM 77 269 2.0E-63 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_1100 5f498f3b2f176480a6c28643f3846866 368 SUPERFAMILY SSF101801 288 364 8.76E-13 T 14-10-2018 IPR036429 SpoA-like superfamily TMO_1100 5f498f3b2f176480a6c28643f3846866 368 SUPERFAMILY SSF103039 85 269 9.68E-10 T 14-10-2018 IPR028976 CheC-like superfamily TMO_1100 5f498f3b2f176480a6c28643f3846866 368 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 290 360 5.9E-18 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) TMO_1100 5f498f3b2f176480a6c28643f3846866 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 48 61 4.6E-23 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_1100 5f498f3b2f176480a6c28643f3846866 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 152 171 4.6E-23 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_1100 5f498f3b2f176480a6c28643f3846866 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 251 269 4.6E-23 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_1100 5f498f3b2f176480a6c28643f3846866 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 127 143 4.6E-23 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_b0570 b141a64ca05ad28feb794515319058f4 420 Pfam PF02515 CoA-transferase family III 24 396 5.6E-109 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_b0570 b141a64ca05ad28feb794515319058f4 420 Gene3D G3DSA:3.40.50.10540 23 413 3.3E-114 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_b0570 b141a64ca05ad28feb794515319058f4 420 SUPERFAMILY SSF89796 21 419 2.49E-114 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_b0570 b141a64ca05ad28feb794515319058f4 420 Gene3D G3DSA:3.30.1540.10 254 348 3.3E-114 T 14-10-2018 TMO_b0444 3dd4a368ee347f1b59c3b3f03300dd26 231 Gene3D G3DSA:3.40.50.300 1 231 3.4E-57 T 14-10-2018 TMO_b0444 3dd4a368ee347f1b59c3b3f03300dd26 231 Pfam PF00005 ABC transporter 19 159 5.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0444 3dd4a368ee347f1b59c3b3f03300dd26 231 SMART SM00382 26 208 2.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0444 3dd4a368ee347f1b59c3b3f03300dd26 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0444 3dd4a368ee347f1b59c3b3f03300dd26 231 SUPERFAMILY SSF52540 2 226 5.13E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1042 7a08e2edf221c8e06a4e8531be418348 320 Gene3D G3DSA:2.60.120.1440 111 238 4.1E-23 T 14-10-2018 TMO_1042 7a08e2edf221c8e06a4e8531be418348 320 PIRSF PIRSF018266 6 320 3.2E-76 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_1042 7a08e2edf221c8e06a4e8531be418348 320 Pfam PF16220 Domain of unknown function (DUF4880) 16 58 2.7E-8 T 14-10-2018 IPR032623 FecR, N-terminal TMO_1042 7a08e2edf221c8e06a4e8531be418348 320 Pfam PF04773 FecR protein 117 208 6.5E-20 T 14-10-2018 IPR006860 FecR protein TMO_3213 55571b7ebc9077cdfe90c1cdb3eb2103 158 Pfam PF02566 OsmC-like protein 53 150 5.2E-18 T 14-10-2018 IPR003718 OsmC/Ohr family TMO_3213 55571b7ebc9077cdfe90c1cdb3eb2103 158 SUPERFAMILY SSF82784 6 150 3.01E-46 T 14-10-2018 IPR036102 OsmC/Ohr superfamily TMO_3213 55571b7ebc9077cdfe90c1cdb3eb2103 158 Gene3D G3DSA:3.30.300.20 2 150 3.1E-50 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_b0513 b0b4da74c35930b11dbf25e3278e8520 326 Pfam PF14525 AraC-binding-like domain 31 202 1.3E-17 T 14-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like TMO_b0513 b0b4da74c35930b11dbf25e3278e8520 326 SUPERFAMILY SSF46689 272 323 1.57E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0513 b0b4da74c35930b11dbf25e3278e8520 326 Pfam PF12833 Helix-turn-helix domain 242 322 5.5E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0513 b0b4da74c35930b11dbf25e3278e8520 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 290 305 6.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_b0513 b0b4da74c35930b11dbf25e3278e8520 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 321 6.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_b0513 b0b4da74c35930b11dbf25e3278e8520 326 Gene3D G3DSA:1.10.10.60 215 326 2.3E-24 T 14-10-2018 TMO_b0513 b0b4da74c35930b11dbf25e3278e8520 326 SMART SM00342 236 321 1.9E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0088 e76da29a318bbaf40eb2410d04403d92 498 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 65 494 7.0E-193 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath TMO_a0088 e76da29a318bbaf40eb2410d04403d92 498 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 22 494 2.2E-208 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath TMO_c0638 b34f2ea00a87eb8f3e364d2c78ad81af 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 2.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0638 b34f2ea00a87eb8f3e364d2c78ad81af 214 SUPERFAMILY SSF46689 9 76 5.2E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0638 b34f2ea00a87eb8f3e364d2c78ad81af 214 Gene3D G3DSA:1.10.357.10 17 202 2.7E-34 T 14-10-2018 TMO_c0638 b34f2ea00a87eb8f3e364d2c78ad81af 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0638 b34f2ea00a87eb8f3e364d2c78ad81af 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 SMART SM00982 1040 1140 8.4E-42 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 SMART SM00487 630 820 3.8E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 SMART SM01058 510 606 9.0E-43 T 14-10-2018 IPR003711 CarD-like/TRCF domain TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 Gene3D G3DSA:3.40.50.11180 44 349 1.0E-81 T 14-10-2018 TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF52540 13 359 1.13E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 SMART SM00490 856 940 1.7E-19 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF52540 812 1020 6.18E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 Gene3D G3DSA:3.40.50.300 572 811 9.8E-215 T 14-10-2018 TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 Pfam PF02559 CarD-like/TRCF domain 511 603 1.4E-23 T 14-10-2018 IPR003711 CarD-like/TRCF domain TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 35 1182 27.105 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF143517 1032 1179 4.71E-40 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 Pfam PF03461 TRCF domain 1043 1133 1.3E-24 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 163 1113 2.0E-303 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 Gene3D G3DSA:2.30.30.840 514 571 9.8E-215 T 14-10-2018 TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 Gene3D G3DSA:3.40.50.300 510 1019 9.8E-215 T 14-10-2018 TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 Gene3D G3DSA:3.30.2060.10 146 232 1.0E-81 T 14-10-2018 TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF52540 555 814 8.57E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 Pfam PF00270 DEAD/DEAH box helicase 638 794 1.3E-14 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 Pfam PF00271 Helicase conserved C-terminal domain 835 939 1.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 Gene3D G3DSA:3.90.1150.50 1036 1182 2.1E-36 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF141259 502 576 1.57E-20 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily TMO_1627 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF52540 383 501 3.99E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2052 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 Pfam PF00027 Cyclic nucleotide-binding domain 49 134 7.7E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_2052 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 Gene3D G3DSA:2.60.120.10 21 162 1.4E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_2052 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 PRINTS PR00103 cAMP-dependent protein kinase signature 107 118 1.2E-8 T 14-10-2018 TMO_2052 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 PRINTS PR00103 cAMP-dependent protein kinase signature 51 65 1.2E-8 T 14-10-2018 TMO_2052 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 PRINTS PR00103 cAMP-dependent protein kinase signature 95 104 1.2E-8 T 14-10-2018 TMO_2052 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 PRINTS PR00103 cAMP-dependent protein kinase signature 66 80 1.2E-8 T 14-10-2018 TMO_2052 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 97 114 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site TMO_2052 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 SMART SM00100 30 147 1.0E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_2052 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 SUPERFAMILY SSF51206 23 156 6.55E-34 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like TMO_2613 cae87c463fa8e68686b2dbf89001792e 160 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 148 9.0E-36 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P TMO_2613 cae87c463fa8e68686b2dbf89001792e 160 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 148 1.5E-46 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2613 cae87c463fa8e68686b2dbf89001792e 160 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 150 20.547 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 TMO_2613 cae87c463fa8e68686b2dbf89001792e 160 SUPERFAMILY SSF52080 4 149 4.32E-43 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily TMO_2613 cae87c463fa8e68686b2dbf89001792e 160 ProSitePatterns PS00475 Ribosomal protein L15 signature. 114 144 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2613 cae87c463fa8e68686b2dbf89001792e 160 Gene3D G3DSA:3.100.10.10 69 150 4.5E-19 T 14-10-2018 TMO_2967 8cc266692e00765fb722591955c8c0ec 496 Pfam PF01926 50S ribosome-binding GTPase 162 279 4.1E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_2967 8cc266692e00765fb722591955c8c0ec 496 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 TMO_2967 8cc266692e00765fb722591955c8c0ec 496 Gene3D G3DSA:3.40.50.300 160 358 2.1E-46 T 14-10-2018 TMO_2967 8cc266692e00765fb722591955c8c0ec 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_2967 8cc266692e00765fb722591955c8c0ec 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_2967 8cc266692e00765fb722591955c8c0ec 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 7.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_2967 8cc266692e00765fb722591955c8c0ec 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 7.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_2967 8cc266692e00765fb722591955c8c0ec 496 SUPERFAMILY SSF82051 2 158 3.79E-54 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily TMO_2967 8cc266692e00765fb722591955c8c0ec 496 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 324 6.0E-134 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TMO_2967 8cc266692e00765fb722591955c8c0ec 496 Pfam PF01018 GTP1/OBG 5 158 1.6E-56 T 14-10-2018 IPR006169 GTP1/OBG domain TMO_2967 8cc266692e00765fb722591955c8c0ec 496 SUPERFAMILY SSF52540 150 335 4.6E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2967 8cc266692e00765fb722591955c8c0ec 496 Hamap MF_01454 GTPase Obg [obg]. 2 327 45.774 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TMO_2967 8cc266692e00765fb722591955c8c0ec 496 Gene3D G3DSA:2.70.210.12 1 158 7.5E-57 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily TMO_0671 4b69d19317a28090e70d52f8abd31659 103 SMART SM00966 20 65 0.0046 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TMO_0671 4b69d19317a28090e70d52f8abd31659 103 Gene3D G3DSA:2.10.260.10 10 61 2.7E-5 T 14-10-2018 TMO_0671 4b69d19317a28090e70d52f8abd31659 103 SUPERFAMILY SSF89447 19 62 1.31E-7 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily TMO_c0163 7d075da74c574d3256fb829ec1f0683d 223 Gene3D G3DSA:2.30.270.10 108 177 1.8E-21 T 14-10-2018 IPR023361 DUF1285, beta-roll domain superfamily TMO_c0163 7d075da74c574d3256fb829ec1f0683d 223 Pfam PF06938 Protein of unknown function (DUF1285) 56 201 3.8E-52 T 14-10-2018 IPR010707 Protein of unknown function DUF1285 TMO_c0163 7d075da74c574d3256fb829ec1f0683d 223 Gene3D G3DSA:3.10.540.10 23 107 1.0E-28 T 14-10-2018 TMO_1731 584392b29c4bbad6a3f72266aec267ef 281 Gene3D G3DSA:2.60.260.20 34 102 3.6E-13 T 14-10-2018 TMO_1731 584392b29c4bbad6a3f72266aec267ef 281 Pfam PF05194 UreE urease accessory protein, C-terminal domain 104 201 2.0E-20 T 14-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 TMO_1731 584392b29c4bbad6a3f72266aec267ef 281 Pfam PF05194 UreE urease accessory protein, C-terminal domain 214 281 1.2E-13 T 14-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 TMO_1731 584392b29c4bbad6a3f72266aec267ef 281 SUPERFAMILY SSF69287 42 103 9.94E-15 T 14-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily TMO_1731 584392b29c4bbad6a3f72266aec267ef 281 Gene3D G3DSA:3.30.70.790 104 171 2.3E-21 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 TMO_1731 584392b29c4bbad6a3f72266aec267ef 281 Pfam PF02814 UreE urease accessory protein, N-terminal domain 45 95 5.2E-14 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal TMO_1731 584392b29c4bbad6a3f72266aec267ef 281 SMART SM00988 32 97 4.3E-12 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal TMO_1731 584392b29c4bbad6a3f72266aec267ef 281 Hamap MF_00822 Urease accessory protein UreE [ureE]. 33 177 19.48 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 TMO_1731 584392b29c4bbad6a3f72266aec267ef 281 SUPERFAMILY SSF69737 103 171 2.62E-14 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 TMO_1731 584392b29c4bbad6a3f72266aec267ef 281 Gene3D G3DSA:3.30.70.790 209 278 2.2E-15 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 TMO_1731 584392b29c4bbad6a3f72266aec267ef 281 SUPERFAMILY SSF69737 218 273 1.31E-8 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 TMO_1728 cdcba287e25f1b2e1008e23a45b18b2a 100 Gene3D G3DSA:3.30.280.10 1 100 5.2E-48 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1728 cdcba287e25f1b2e1008e23a45b18b2a 100 PIRSF PIRSF001223 1 100 8.3E-51 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1728 cdcba287e25f1b2e1008e23a45b18b2a 100 SUPERFAMILY SSF54111 1 100 1.2E-45 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1728 cdcba287e25f1b2e1008e23a45b18b2a 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.491 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1728 cdcba287e25f1b2e1008e23a45b18b2a 100 Pfam PF00547 Urease, gamma subunit 1 99 1.5E-47 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1728 cdcba287e25f1b2e1008e23a45b18b2a 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 7.0E-37 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1728 cdcba287e25f1b2e1008e23a45b18b2a 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 6.6E-48 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_c0542 77b9e93f2a301a134e64b1fd363985a4 203 SUPERFAMILY SSF51735 1 202 3.8E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0542 77b9e93f2a301a134e64b1fd363985a4 203 Gene3D G3DSA:3.40.50.720 3 202 4.0E-48 T 14-10-2018 TMO_c0542 77b9e93f2a301a134e64b1fd363985a4 203 Pfam PF13460 NAD(P)H-binding 8 192 9.1E-30 T 14-10-2018 IPR016040 NAD(P)-binding domain TMO_2120 fd84e6d2f7080e7eaff1a49046bb4b5d 232 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 85 137 3.1E-11 T 14-10-2018 TMO_2120 fd84e6d2f7080e7eaff1a49046bb4b5d 232 SUPERFAMILY SSF53335 56 195 3.86E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_2120 fd84e6d2f7080e7eaff1a49046bb4b5d 232 Gene3D G3DSA:3.40.50.150 52 203 5.8E-19 T 14-10-2018 TMO_1005 7adb0cadabfac3bd239dde96f850b669 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.8E-36 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TMO_1005 7adb0cadabfac3bd239dde96f850b669 72 SMART SM00316 4 72 1.1E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 TMO_1005 7adb0cadabfac3bd239dde96f850b669 72 SUPERFAMILY SSF50249 1 71 4.36E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_1005 7adb0cadabfac3bd239dde96f850b669 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.7E-29 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 TMO_1005 7adb0cadabfac3bd239dde96f850b669 72 Gene3D G3DSA:2.40.50.140 1 72 1.1E-38 T 14-10-2018 TMO_1005 7adb0cadabfac3bd239dde96f850b669 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.365 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TMO_2701 bb13954214f5333ee28d4895ae64fb64 824 Pfam PF07715 TonB-dependent Receptor Plug Domain 175 272 1.1E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_2701 bb13954214f5333ee28d4895ae64fb64 824 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 176 824 1.8E-103 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_2701 bb13954214f5333ee28d4895ae64fb64 824 Gene3D G3DSA:3.55.50.30 47 148 1.0E-27 T 14-10-2018 TMO_2701 bb13954214f5333ee28d4895ae64fb64 824 SMART SM00965 77 128 4.2E-11 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_2701 bb13954214f5333ee28d4895ae64fb64 824 Gene3D G3DSA:2.40.170.20 283 824 1.3E-130 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_2701 bb13954214f5333ee28d4895ae64fb64 824 Gene3D G3DSA:2.170.130.10 157 282 2.8E-37 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_2701 bb13954214f5333ee28d4895ae64fb64 824 Pfam PF00593 TonB dependent receptor 360 822 2.7E-56 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_2701 bb13954214f5333ee28d4895ae64fb64 824 SUPERFAMILY SSF56935 134 824 2.25E-127 T 14-10-2018 TMO_3114 6c5429bb9a72983e5378eb129ebd41ae 41 Pfam PF08042 PqqA family 2 20 7.9E-9 T 14-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 TMO_3114 6c5429bb9a72983e5378eb129ebd41ae 41 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 3 22 2.3E-7 T 14-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 TMO_a0162 e1d6848c2857204f21fc70d7597ae520 400 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 137 149 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_a0162 e1d6848c2857204f21fc70d7597ae520 400 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 130 4.6E-21 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_a0162 e1d6848c2857204f21fc70d7597ae520 400 PIRSF PIRSF016578 12 95 0.11 T 14-10-2018 TMO_a0162 e1d6848c2857204f21fc70d7597ae520 400 PIRSF PIRSF016578 147 385 6.1E-14 T 14-10-2018 TMO_a0162 e1d6848c2857204f21fc70d7597ae520 400 Gene3D G3DSA:2.40.110.10 134 248 2.6E-46 T 14-10-2018 TMO_a0162 e1d6848c2857204f21fc70d7597ae520 400 SUPERFAMILY SSF56645 15 254 8.25E-74 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_a0162 e1d6848c2857204f21fc70d7597ae520 400 SUPERFAMILY SSF47203 242 400 1.41E-46 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_a0162 e1d6848c2857204f21fc70d7597ae520 400 Gene3D G3DSA:1.20.140.10 249 400 6.1E-48 T 14-10-2018 TMO_a0162 e1d6848c2857204f21fc70d7597ae520 400 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 231 5.3E-27 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_a0162 e1d6848c2857204f21fc70d7597ae520 400 Gene3D G3DSA:1.10.540.10 12 133 1.0E-26 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_a0162 e1d6848c2857204f21fc70d7597ae520 400 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 397 8.0E-42 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_c0670 b0bcf6b6992f88f07f2916413de5f113 418 Gene3D G3DSA:3.40.50.1100 65 385 1.4E-99 T 14-10-2018 TMO_c0670 b0bcf6b6992f88f07f2916413de5f113 418 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 74 378 1.2E-59 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_c0670 b0bcf6b6992f88f07f2916413de5f113 418 Gene3D G3DSA:3.40.50.1100 110 211 1.4E-99 T 14-10-2018 TMO_c0670 b0bcf6b6992f88f07f2916413de5f113 418 SUPERFAMILY SSF53686 49 389 2.49E-65 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_c0940 1e545f4737f9a59d7b0b2a96a861f4bf 169 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 53 150 7.5E-14 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_c0940 1e545f4737f9a59d7b0b2a96a861f4bf 169 SUPERFAMILY SSF54637 47 164 7.93E-28 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_c0940 1e545f4737f9a59d7b0b2a96a861f4bf 169 Pfam PF03061 Thioesterase superfamily 82 158 9.1E-11 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_c0940 1e545f4737f9a59d7b0b2a96a861f4bf 169 Gene3D G3DSA:3.10.129.10 42 167 1.7E-27 T 14-10-2018 TMO_1395 bda3f33f5604078973e4c14f759ff3aa 425 Pfam PF05977 Transmembrane secretion effector 13 412 3.5E-46 T 14-10-2018 IPR010290 Transmembrane secretion effector TMO_1395 bda3f33f5604078973e4c14f759ff3aa 425 Gene3D G3DSA:1.20.1250.20 21 405 1.3E-30 T 14-10-2018 TMO_1395 bda3f33f5604078973e4c14f759ff3aa 425 SUPERFAMILY SSF103473 21 410 2.75E-38 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0380 846f5b777db2f2661b8dc6b12d0d08fc 499 Gene3D G3DSA:3.40.309.10 250 452 3.1E-154 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_c0380 846f5b777db2f2661b8dc6b12d0d08fc 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_c0380 846f5b777db2f2661b8dc6b12d0d08fc 499 Pfam PF00171 Aldehyde dehydrogenase family 20 479 4.3E-142 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_c0380 846f5b777db2f2661b8dc6b12d0d08fc 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 483 1.1E-212 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 TMO_c0380 846f5b777db2f2661b8dc6b12d0d08fc 499 Gene3D G3DSA:3.40.605.10 24 460 3.1E-154 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_c0380 846f5b777db2f2661b8dc6b12d0d08fc 499 SUPERFAMILY SSF53720 3 483 3.27E-149 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_c0507 c578140186d97b59b27c40c7a9ef7aee 361 SUPERFAMILY SSF53659 16 336 2.11E-58 T 14-10-2018 TMO_c0507 c578140186d97b59b27c40c7a9ef7aee 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 22 318 8.1E-37 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TMO_c0507 c578140186d97b59b27c40c7a9ef7aee 361 Gene3D G3DSA:3.40.718.10 14 359 4.7E-60 T 14-10-2018 TMO_c0507 c578140186d97b59b27c40c7a9ef7aee 361 SMART SM01329 21 332 3.3E-22 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TMO_d0022 48026f4cedf1d3ca11a73cde4cc50a3b 172 SUPERFAMILY SSF75217 8 147 1.31E-14 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases TMO_d0022 48026f4cedf1d3ca11a73cde4cc50a3b 172 Pfam PF00588 SpoU rRNA Methylase family 11 144 1.0E-8 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TMO_d0022 48026f4cedf1d3ca11a73cde4cc50a3b 172 Gene3D G3DSA:3.40.1280.10 2 150 2.7E-12 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_3453 5906663552f113c933f1ad49a2826aec 330 Gene3D G3DSA:3.30.1110.10 16 132 3.3E-89 T 14-10-2018 TMO_3453 5906663552f113c933f1ad49a2826aec 330 Pfam PF00294 pfkB family carbohydrate kinase 58 317 3.2E-48 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB TMO_3453 5906663552f113c933f1ad49a2826aec 330 Gene3D G3DSA:3.40.1190.20 13 315 3.3E-89 T 14-10-2018 IPR029056 Ribokinase-like TMO_3453 5906663552f113c933f1ad49a2826aec 330 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 274 287 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_3453 5906663552f113c933f1ad49a2826aec 330 SUPERFAMILY SSF53613 5 319 2.34E-77 T 14-10-2018 IPR029056 Ribokinase-like TMO_1552 ebb0b96ed03e4c4a7ab56d317c750796 594 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 461 486 - T 14-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 TMO_1552 ebb0b96ed03e4c4a7ab56d317c750796 594 SUPERFAMILY SSF48576 318 578 6.04E-44 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily TMO_1552 ebb0b96ed03e4c4a7ab56d317c750796 594 Gene3D G3DSA:1.10.600.10 316 588 1.4E-49 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily TMO_1552 ebb0b96ed03e4c4a7ab56d317c750796 594 Gene3D G3DSA:1.10.600.10 28 285 2.5E-40 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily TMO_1552 ebb0b96ed03e4c4a7ab56d317c750796 594 Pfam PF00494 Squalene/phytoene synthase 319 571 7.2E-45 T 14-10-2018 TMO_1552 ebb0b96ed03e4c4a7ab56d317c750796 594 Pfam PF00494 Squalene/phytoene synthase 49 294 2.0E-31 T 14-10-2018 TMO_1552 ebb0b96ed03e4c4a7ab56d317c750796 594 SUPERFAMILY SSF48576 36 309 1.01E-34 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily TMO_c0069 8b3a75525211a45a4d5db77cf49aad83 301 Pfam PF12101 Protein of unknown function (DUF3577) 131 257 3.0E-49 T 14-10-2018 IPR021960 Protein of unknown function DUF3577 TMO_c0069 8b3a75525211a45a4d5db77cf49aad83 301 Pfam PF12101 Protein of unknown function (DUF3577) 5 123 3.1E-37 T 14-10-2018 IPR021960 Protein of unknown function DUF3577 TMO_2767 d794fd512746bb3bdd8dcee36ab10cee 446 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 4 443 39.771 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 TMO_2767 d794fd512746bb3bdd8dcee36ab10cee 446 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 441 3.0E-29 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 TMO_2767 d794fd512746bb3bdd8dcee36ab10cee 446 SUPERFAMILY SSF52540 6 200 1.51E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2767 d794fd512746bb3bdd8dcee36ab10cee 446 SUPERFAMILY SSF52317 252 440 1.05E-22 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_2767 d794fd512746bb3bdd8dcee36ab10cee 446 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 193 1.4E-11 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TMO_2767 d794fd512746bb3bdd8dcee36ab10cee 446 Gene3D G3DSA:3.40.50.300 7 192 3.9E-20 T 14-10-2018 TMO_2767 d794fd512746bb3bdd8dcee36ab10cee 446 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 7 440 2.4E-89 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 TMO_c0299 26ff50244976ba0458ecb5c5b8f9ab8b 403 SUPERFAMILY SSF52440 174 282 1.09E-21 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_c0299 26ff50244976ba0458ecb5c5b8f9ab8b 403 Gene3D G3DSA:3.30.1490.330 267 356 1.1E-10 T 14-10-2018 TMO_c0299 26ff50244976ba0458ecb5c5b8f9ab8b 403 SUPERFAMILY SSF56059 1 396 1.84E-59 T 14-10-2018 TMO_c0299 26ff50244976ba0458ecb5c5b8f9ab8b 403 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 15 398 2.4E-109 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain TMO_2514 834527937d15211aa01e5ef08073a568 343 Gene3D G3DSA:3.40.190.10 27 256 6.1E-52 T 14-10-2018 TMO_2514 834527937d15211aa01e5ef08073a568 343 SMART SM00062 37 267 1.2E-42 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_2514 834527937d15211aa01e5ef08073a568 343 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 257 7.4E-30 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_2514 834527937d15211aa01e5ef08073a568 343 SUPERFAMILY SSF53850 28 258 6.34E-49 T 14-10-2018 TMO_2514 834527937d15211aa01e5ef08073a568 343 Gene3D G3DSA:3.40.190.10 129 225 6.1E-52 T 14-10-2018 TMO_0903 14ed50e2dab57465d9d1dc450cb85b71 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 90 226 2.2E-41 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TMO_0903 14ed50e2dab57465d9d1dc450cb85b71 244 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 20 243 39.682 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 TMO_0903 14ed50e2dab57465d9d1dc450cb85b71 244 TIGRFAM TIGR02796 tolQ: protein TolQ 21 238 3.6E-86 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 TMO_0764 75c5b5248b9202c3bf44bc1099d08087 668 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 13 626 1.5E-212 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TMO_0764 75c5b5248b9202c3bf44bc1099d08087 668 Gene3D G3DSA:3.90.1310.30 53 238 1.1E-37 T 14-10-2018 TMO_0764 75c5b5248b9202c3bf44bc1099d08087 668 Gene3D G3DSA:3.40.710.10 239 635 3.4E-95 T 14-10-2018 TMO_0764 75c5b5248b9202c3bf44bc1099d08087 668 SUPERFAMILY SSF56601 243 626 1.29E-92 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_0764 75c5b5248b9202c3bf44bc1099d08087 668 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 228 4.7E-37 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TMO_0764 75c5b5248b9202c3bf44bc1099d08087 668 SUPERFAMILY SSF56519 50 242 6.93E-44 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TMO_0764 75c5b5248b9202c3bf44bc1099d08087 668 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 622 6.3E-63 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TMO_2157 01e029a18cea9f5d3e4c7a140c8ae916 370 Pfam PF12698 ABC-2 family transporter protein 23 361 3.1E-32 T 14-10-2018 TMO_a0348 ad1e312b18c54f6fa6b246e137e2d2e9 288 SUPERFAMILY SSF53474 30 276 5.81E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0348 ad1e312b18c54f6fa6b246e137e2d2e9 288 Gene3D G3DSA:3.40.50.1820 16 285 1.1E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1264 4cbd0e312866fe84b44d242482a742e4 584 TIGRFAM TIGR00815 sulP: sulfate permease 9 552 1.3E-119 T 14-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 TMO_1264 4cbd0e312866fe84b44d242482a742e4 584 Pfam PF00916 Sulfate permease family 25 405 7.4E-90 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TMO_1264 4cbd0e312866fe84b44d242482a742e4 584 Gene3D G3DSA:3.30.750.24 435 569 2.5E-27 T 14-10-2018 IPR036513 STAS domain superfamily TMO_1264 4cbd0e312866fe84b44d242482a742e4 584 Pfam PF01740 STAS domain 460 563 9.4E-17 T 14-10-2018 IPR002645 STAS domain TMO_1264 4cbd0e312866fe84b44d242482a742e4 584 SUPERFAMILY SSF52091 456 568 1.69E-17 T 14-10-2018 IPR036513 STAS domain superfamily TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 SMART SM00387 280 392 6.4E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 SMART SM00388 172 236 2.1E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 SUPERFAMILY SSF158472 117 169 4.58E-7 T 14-10-2018 TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 SUPERFAMILY SSF47384 155 231 2.94E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 SMART SM00304 117 171 6.8E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 332 2.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 371 2.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 Gene3D G3DSA:1.20.1480.50 81 175 1.3E-8 T 14-10-2018 TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 SUPERFAMILY SSF55874 226 389 1.06E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 Pfam PF00512 His Kinase A (phospho-acceptor) domain 180 231 1.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 281 390 5.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 Gene3D G3DSA:3.30.565.10 241 391 4.7E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 Pfam PF00672 HAMP domain 117 168 9.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_a0028 e17c4968e14e8e8e4b2a3d3dbd5c47a8 392 Gene3D G3DSA:1.10.287.130 178 235 2.3E-7 T 14-10-2018 TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 467 1.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 1.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 1.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 1.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 308 5.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 468 1.4E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 SMART SM00387 354 469 3.1E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 Gene3D G3DSA:3.30.565.10 307 469 3.0E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 SUPERFAMILY SSF55874 297 468 1.83E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 SUPERFAMILY SSF47384 223 309 6.47E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 SMART SM00388 237 308 7.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_3174 c685c220304b9871d56c0cfeffe39bfb 469 Gene3D G3DSA:1.10.287.130 203 306 5.9E-24 T 14-10-2018 TMO_a0438 ee1587810f0ea08e9de0bdd706728dc7 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 419 1.2E-120 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_a0438 ee1587810f0ea08e9de0bdd706728dc7 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 414 1.9E-106 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_a0438 ee1587810f0ea08e9de0bdd706728dc7 425 PIRSF PIRSF006066 1 424 3.4E-127 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_2099 10c4731a4f28bf70d144a58b578393cc 312 PIRSF PIRSF011468 12 301 3.5E-158 T 14-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_2099 10c4731a4f28bf70d144a58b578393cc 312 Pfam PF06007 Phosphonate metabolism protein PhnJ 21 292 2.3E-144 T 14-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_1577 6a348d060e14c36f88189b3a111d2534 211 SUPERFAMILY SSF54427 76 207 3.19E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_1577 6a348d060e14c36f88189b3a111d2534 211 Gene3D G3DSA:3.10.450.50 70 211 4.9E-26 T 14-10-2018 TMO_1577 6a348d060e14c36f88189b3a111d2534 211 Pfam PF13474 SnoaL-like domain 108 205 5.4E-9 T 14-10-2018 IPR037401 SnoaL-like domain TMO_1847 f74e330d797d4d1e93f5d95f3d5ad175 375 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 5 353 1.5E-76 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 TMO_1847 f74e330d797d4d1e93f5d95f3d5ad175 375 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 351 8.4E-62 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TMO_1588 21c9c32194a4eba34a3c46ec8b5504d7 273 Pfam PF01936 NYN domain 14 171 5.2E-38 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type TMO_1588 21c9c32194a4eba34a3c46ec8b5504d7 273 Gene3D G3DSA:3.40.50.1010 7 174 1.8E-51 T 14-10-2018 TMO_a0327 645f6b832a8920ecbb3b1f71ac5fa381 195 Gene3D G3DSA:1.10.1740.10 2 82 1.7E-21 T 14-10-2018 TMO_a0327 645f6b832a8920ecbb3b1f71ac5fa381 195 Pfam PF08281 Sigma-70, region 4 104 156 8.7E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_a0327 645f6b832a8920ecbb3b1f71ac5fa381 195 Gene3D G3DSA:1.10.10.10 101 166 8.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0327 645f6b832a8920ecbb3b1f71ac5fa381 195 SUPERFAMILY SSF88659 99 161 3.92E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_a0327 645f6b832a8920ecbb3b1f71ac5fa381 195 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 158 7.2E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_a0327 645f6b832a8920ecbb3b1f71ac5fa381 195 SUPERFAMILY SSF88946 6 90 2.0E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_a0327 645f6b832a8920ecbb3b1f71ac5fa381 195 Pfam PF04542 Sigma-70 region 2 16 79 2.3E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_2912 03b6a4a26bc563208305690a85befee8 562 SMART SM00304 213 266 1.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2912 03b6a4a26bc563208305690a85befee8 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 379 522 4.0E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2912 03b6a4a26bc563208305690a85befee8 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 477 506 1.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2912 03b6a4a26bc563208305690a85befee8 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 352 1.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2912 03b6a4a26bc563208305690a85befee8 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 427 1.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2912 03b6a4a26bc563208305690a85befee8 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 429 458 1.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2912 03b6a4a26bc563208305690a85befee8 562 SMART SM00283 302 556 7.3E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2912 03b6a4a26bc563208305690a85befee8 562 Pfam PF00672 HAMP domain 214 260 2.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2912 03b6a4a26bc563208305690a85befee8 562 Gene3D G3DSA:1.10.8.500 214 264 1.3E-12 T 14-10-2018 TMO_2912 03b6a4a26bc563208305690a85befee8 562 Gene3D G3DSA:1.10.287.950 268 560 7.4E-54 T 14-10-2018 TMO_2912 03b6a4a26bc563208305690a85befee8 562 SUPERFAMILY SSF58104 241 555 9.94E-60 T 14-10-2018 TMO_2912 03b6a4a26bc563208305690a85befee8 562 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 184 8.2E-24 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain TMO_0110 1e2b966fdc9d7e06d3be8d4d20d92a4d 113 SUPERFAMILY SSF117916 17 111 2.84E-32 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TMO_0110 1e2b966fdc9d7e06d3be8d4d20d92a4d 113 Pfam PF01883 Iron-sulfur cluster assembly protein 17 91 1.4E-19 T 14-10-2018 IPR002744 MIP18 family-like TMO_0110 1e2b966fdc9d7e06d3be8d4d20d92a4d 113 Gene3D G3DSA:3.30.300.130 10 112 1.1E-37 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TMO_3536 321d2942d6e5f5a57bca393bff05103b 145 Gene3D G3DSA:1.10.260.40 6 74 2.6E-15 T 14-10-2018 TMO_3536 321d2942d6e5f5a57bca393bff05103b 145 Pfam PF01381 Helix-turn-helix 17 69 8.2E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_3536 321d2942d6e5f5a57bca393bff05103b 145 SMART SM00530 15 70 1.3E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_3536 321d2942d6e5f5a57bca393bff05103b 145 SUPERFAMILY SSF47413 4 75 2.11E-25 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_3138 3d87ad1fa9af3efab4a9ffacf00782fe 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 TMO_3138 3d87ad1fa9af3efab4a9ffacf00782fe 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.8E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_3138 3d87ad1fa9af3efab4a9ffacf00782fe 112 Gene3D G3DSA:3.30.70.120 1 112 2.6E-45 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TMO_3138 3d87ad1fa9af3efab4a9ffacf00782fe 112 PIRSF PIRSF039144 1 112 1.5E-52 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_3138 3d87ad1fa9af3efab4a9ffacf00782fe 112 PRINTS PR00340 P-II protein signature 2 17 1.8E-39 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_3138 3d87ad1fa9af3efab4a9ffacf00782fe 112 PRINTS PR00340 P-II protein signature 83 103 1.8E-39 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_3138 3d87ad1fa9af3efab4a9ffacf00782fe 112 PRINTS PR00340 P-II protein signature 52 75 1.8E-39 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_3138 3d87ad1fa9af3efab4a9ffacf00782fe 112 PRINTS PR00340 P-II protein signature 23 41 1.8E-39 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_3138 3d87ad1fa9af3efab4a9ffacf00782fe 112 SUPERFAMILY SSF54913 1 112 4.45E-43 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TMO_3138 3d87ad1fa9af3efab4a9ffacf00782fe 112 SMART SM00938 4 105 4.0E-63 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_3138 3d87ad1fa9af3efab4a9ffacf00782fe 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 TMO_1073 b90656a934fb21b326998590731ab8b9 162 Gene3D G3DSA:1.20.1290.10 18 160 5.3E-25 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_1073 b90656a934fb21b326998590731ab8b9 162 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 109 5.0E-10 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_1073 b90656a934fb21b326998590731ab8b9 162 SUPERFAMILY SSF69118 30 154 9.68E-25 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_1073 b90656a934fb21b326998590731ab8b9 162 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 43 84 1.2E-7 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_c0771 b062745de365cff96b0bacf39fcd9142 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 237 3.9E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_c0771 b062745de365cff96b0bacf39fcd9142 255 Gene3D G3DSA:3.40.50.300 1 245 7.8E-56 T 14-10-2018 TMO_c0771 b062745de365cff96b0bacf39fcd9142 255 Pfam PF00005 ABC transporter 4 166 1.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0771 b062745de365cff96b0bacf39fcd9142 255 SMART SM00382 13 223 2.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0771 b062745de365cff96b0bacf39fcd9142 255 SUPERFAMILY SSF52540 2 237 6.45E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 TIGRFAM TIGR01351 adk: adenylate kinase 3 213 3.9E-78 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 Pfam PF05191 Adenylate kinase, active site lid 127 163 1.1E-12 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 SUPERFAMILY SSF52540 2 213 6.58E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 Gene3D G3DSA:3.40.50.300 1 215 7.0E-77 T 14-10-2018 TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 Hamap MF_00235 Adenylate kinase [adk]. 1 214 49.752 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 PRINTS PR00094 Adenylate kinase signature 161 176 4.2E-37 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 PRINTS PR00094 Adenylate kinase signature 178 192 4.2E-37 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 PRINTS PR00094 Adenylate kinase signature 81 97 4.2E-37 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 PRINTS PR00094 Adenylate kinase signature 32 46 4.2E-37 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 PRINTS PR00094 Adenylate kinase signature 4 17 4.2E-37 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TMO_2611 33cddb3a8d1244d8b1719c37adb950f5 217 Pfam PF00406 Adenylate kinase 5 191 5.1E-59 T 14-10-2018 TMO_3303 fc4dd793998f9ffd73aefb0b9b024d88 442 SUPERFAMILY SSF53850 29 428 4.35E-66 T 14-10-2018 TMO_3303 fc4dd793998f9ffd73aefb0b9b024d88 442 Gene3D G3DSA:3.40.190.10 32 387 6.6E-130 T 14-10-2018 TMO_3303 fc4dd793998f9ffd73aefb0b9b024d88 442 Gene3D G3DSA:3.40.190.10 148 427 6.6E-130 T 14-10-2018 TMO_3303 fc4dd793998f9ffd73aefb0b9b024d88 442 Pfam PF13416 Bacterial extracellular solute-binding protein 46 361 1.1E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_1044 5930d4a4a8cd706ba95fcac7851ce046 295 Gene3D G3DSA:3.40.190.10 166 269 8.6E-56 T 14-10-2018 TMO_1044 5930d4a4a8cd706ba95fcac7851ce046 295 Gene3D G3DSA:1.10.10.10 5 91 3.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1044 5930d4a4a8cd706ba95fcac7851ce046 295 Pfam PF03466 LysR substrate binding domain 90 294 2.5E-39 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1044 5930d4a4a8cd706ba95fcac7851ce046 295 SUPERFAMILY SSF46785 6 90 7.33E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1044 5930d4a4a8cd706ba95fcac7851ce046 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1044 5930d4a4a8cd706ba95fcac7851ce046 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1044 5930d4a4a8cd706ba95fcac7851ce046 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1044 5930d4a4a8cd706ba95fcac7851ce046 295 SUPERFAMILY SSF53850 92 294 1.5E-41 T 14-10-2018 TMO_1044 5930d4a4a8cd706ba95fcac7851ce046 295 Gene3D G3DSA:3.40.190.10 94 293 8.6E-56 T 14-10-2018 TMO_1044 5930d4a4a8cd706ba95fcac7851ce046 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.5E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2462 9883f617493462d81b6e9b31aec2c0e6 315 Pfam PF03466 LysR substrate binding domain 91 299 3.2E-34 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2462 9883f617493462d81b6e9b31aec2c0e6 315 SUPERFAMILY SSF53850 87 301 2.53E-36 T 14-10-2018 TMO_2462 9883f617493462d81b6e9b31aec2c0e6 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 66 6.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2462 9883f617493462d81b6e9b31aec2c0e6 315 SUPERFAMILY SSF46785 11 114 1.12E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2462 9883f617493462d81b6e9b31aec2c0e6 315 Gene3D G3DSA:3.40.190.10 167 270 1.1E-48 T 14-10-2018 TMO_2462 9883f617493462d81b6e9b31aec2c0e6 315 Gene3D G3DSA:3.40.190.10 94 294 1.1E-48 T 14-10-2018 TMO_2462 9883f617493462d81b6e9b31aec2c0e6 315 Gene3D G3DSA:1.10.10.10 7 91 1.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 6 168 8.6E-64 T 14-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 Gene3D G3DSA:3.30.470.30 225 340 8.0E-41 T 14-10-2018 TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 SUPERFAMILY SSF56091 188 384 1.8E-46 T 14-10-2018 TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 525 769 4.4E-87 T 14-10-2018 IPR014145 DNA ligase D, polymerase domain TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 Gene3D G3DSA:3.30.1490.70 210 381 8.0E-41 T 14-10-2018 TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 SUPERFAMILY SSF50249 389 501 3.83E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 202 502 1.1E-74 T 14-10-2018 IPR014146 DNA ligase D, ligase domain TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 Pfam PF04679 ATP dependent DNA ligase C terminal region 402 496 6.5E-18 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 Pfam PF01068 ATP dependent DNA ligase domain 213 383 5.3E-20 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 Gene3D G3DSA:2.40.50.140 386 504 1.1E-24 T 14-10-2018 TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 Gene3D G3DSA:3.90.920.30 532 811 7.1E-91 T 14-10-2018 TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 211 778 7.2E-169 T 14-10-2018 IPR014143 DNA ligase D TMO_a0311 b74cecfbbd4858ab748ecc8e5e14a54a 812 Pfam PF13298 DNA polymerase Ligase (LigD) 39 143 1.5E-37 T 14-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain TMO_3168 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 227 235 2.3E-17 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_3168 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 29 2.3E-17 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_3168 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 59 2.3E-17 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_3168 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 42 2.3E-17 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_3168 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 211 221 2.3E-17 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TMO_3168 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 SUPERFAMILY SSF52374 14 296 2.94E-87 T 14-10-2018 TMO_3168 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 15 289 4.2E-53 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TMO_3168 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_3168 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 Gene3D G3DSA:3.40.50.620 11 301 2.7E-89 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_1712 0f6cc0fb775fd5502ef7647c852d60a9 166 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 143 1.1E-27 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 TMO_1712 0f6cc0fb775fd5502ef7647c852d60a9 166 SUPERFAMILY SSF55961 1 151 2.96E-33 T 14-10-2018 TMO_1712 0f6cc0fb775fd5502ef7647c852d60a9 166 Gene3D G3DSA:3.30.530.20 2 152 2.2E-46 T 14-10-2018 IPR023393 START-like domain superfamily TMO_1769 474f81e6ea6a4b4d2f4502ca13649fb3 274 Pfam PF06230 Protein of unknown function (DUF1009) 59 269 8.5E-72 T 14-10-2018 IPR010415 Protein of unknown function DUF1009 KEGG: 00540+3.6.1.54 TMO_1769 474f81e6ea6a4b4d2f4502ca13649fb3 274 Gene3D G3DSA:3.40.50.20 2 133 1.3E-39 T 14-10-2018 TMO_1769 474f81e6ea6a4b4d2f4502ca13649fb3 274 Gene3D G3DSA:3.40.140.80 134 274 3.0E-49 T 14-10-2018 TMO_0825 48978a699305c3dfabb808a4530ff6ed 314 Pfam PF02219 Methylenetetrahydrofolate reductase 27 299 1.0E-83 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 TMO_0825 48978a699305c3dfabb808a4530ff6ed 314 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 28 298 1.0E-91 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 TMO_0825 48978a699305c3dfabb808a4530ff6ed 314 Gene3D G3DSA:3.20.20.220 23 312 9.4E-94 T 14-10-2018 TMO_0825 48978a699305c3dfabb808a4530ff6ed 314 SUPERFAMILY SSF51730 27 303 1.28E-91 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like TMO_2623 1362115c6943656e1205e8d40d3beaa8 78 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 74 4.2E-36 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2623 1362115c6943656e1205e8d40d3beaa8 78 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 76 23.839 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2623 1362115c6943656e1205e8d40d3beaa8 78 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 3.0E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2623 1362115c6943656e1205e8d40d3beaa8 78 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 3.0E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2623 1362115c6943656e1205e8d40d3beaa8 78 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 3.0E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2623 1362115c6943656e1205e8d40d3beaa8 78 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 1.0E-26 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2623 1362115c6943656e1205e8d40d3beaa8 78 Gene3D G3DSA:2.40.50.140 1 77 8.9E-34 T 14-10-2018 TMO_2623 1362115c6943656e1205e8d40d3beaa8 78 Pfam PF00366 Ribosomal protein S17 8 74 1.5E-31 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2623 1362115c6943656e1205e8d40d3beaa8 78 SUPERFAMILY SSF50249 3 74 3.86E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_c0496 f0e9172e19a640191210024d5ec6aedf 93 Pfam PF08681 Protein of unknown function (DUF1778) 11 90 3.5E-25 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 TMO_c0496 f0e9172e19a640191210024d5ec6aedf 93 SUPERFAMILY SSF47598 8 85 9.56E-22 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_c0496 f0e9172e19a640191210024d5ec6aedf 93 Gene3D G3DSA:1.20.5.780 5 93 5.9E-28 T 14-10-2018 TMO_c0172 855d5eb7c753147966e384c0ca4f3863 155 Pfam PF12385 Papain-like cysteine protease AvrRpt2 12 127 1.9E-6 T 14-10-2018 IPR022118 Peptidase C70, AvrRpt2 TMO_a0237 22a248e130a56617a3f28afd678147d4 119 Gene3D G3DSA:1.10.1220.10 25 72 6.6E-5 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TMO_c0435 0f114f9fbe201842e3ee6ebb139ac63e 198 SUPERFAMILY SSF53335 14 160 2.74E-17 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0435 0f114f9fbe201842e3ee6ebb139ac63e 198 Gene3D G3DSA:3.40.50.150 2 162 1.9E-11 T 14-10-2018 TMO_c0435 0f114f9fbe201842e3ee6ebb139ac63e 198 Pfam PF00398 Ribosomal RNA adenine dimethylase 48 93 1.2E-5 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm TMO_c0435 0f114f9fbe201842e3ee6ebb139ac63e 198 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 50 80 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 TMO_1850 683b83c7770db97af4615c6898e42c55 426 SUPERFAMILY SSF109998 35 203 1.06E-30 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily TMO_1850 683b83c7770db97af4615c6898e42c55 426 Gene3D G3DSA:3.10.50.40 285 383 1.7E-5 T 14-10-2018 TMO_1850 683b83c7770db97af4615c6898e42c55 426 Pfam PF13624 SurA N-terminal domain 8 149 9.4E-18 T 14-10-2018 TMO_1850 683b83c7770db97af4615c6898e42c55 426 SUPERFAMILY SSF54534 294 383 3.66E-10 T 14-10-2018 TMO_1850 683b83c7770db97af4615c6898e42c55 426 SUPERFAMILY SSF54534 178 278 3.53E-24 T 14-10-2018 TMO_1850 683b83c7770db97af4615c6898e42c55 426 Gene3D G3DSA:1.10.4030.10 31 156 6.0E-27 T 14-10-2018 TMO_1850 683b83c7770db97af4615c6898e42c55 426 Gene3D G3DSA:3.10.50.40 174 281 1.6E-31 T 14-10-2018 TMO_1850 683b83c7770db97af4615c6898e42c55 426 Pfam PF00639 PPIC-type PPIASE domain 188 275 1.9E-20 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TMO_1753 5b986890aa7c034a2d16530da0f91e5e 193 Pfam PF13302 Acetyltransferase (GNAT) domain 23 163 4.3E-29 T 14-10-2018 IPR000182 GNAT domain TMO_1753 5b986890aa7c034a2d16530da0f91e5e 193 Gene3D G3DSA:3.40.630.30 15 176 2.4E-42 T 14-10-2018 TMO_1753 5b986890aa7c034a2d16530da0f91e5e 193 SUPERFAMILY SSF55729 17 165 8.86E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_b0029 25551d3a32d06eefffffb4d0cb84196e 367 Pfam PF01966 HD domain 173 311 7.5E-18 T 14-10-2018 IPR006674 HD domain TMO_b0029 25551d3a32d06eefffffb4d0cb84196e 367 SMART SM00448 5 119 3.3E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0029 25551d3a32d06eefffffb4d0cb84196e 367 SUPERFAMILY SSF109604 152 351 2.67E-34 T 14-10-2018 TMO_b0029 25551d3a32d06eefffffb4d0cb84196e 367 Gene3D G3DSA:1.10.3210.10 150 364 1.5E-78 T 14-10-2018 TMO_b0029 25551d3a32d06eefffffb4d0cb84196e 367 Pfam PF00072 Response regulator receiver domain 7 119 1.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0029 25551d3a32d06eefffffb4d0cb84196e 367 Gene3D G3DSA:3.40.50.2300 4 149 2.0E-38 T 14-10-2018 TMO_b0029 25551d3a32d06eefffffb4d0cb84196e 367 SMART SM00471 168 321 4.2E-8 T 14-10-2018 IPR003607 HD/PDEase domain TMO_b0029 25551d3a32d06eefffffb4d0cb84196e 367 SUPERFAMILY SSF52172 3 151 3.84E-39 T 14-10-2018 IPR011006 CheY-like superfamily TMO_2963 0058ba242e3d7e00edf7a79b20f7b486 181 SUPERFAMILY SSF52499 2 179 4.32E-56 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_2963 0058ba242e3d7e00edf7a79b20f7b486 181 Gene3D G3DSA:3.40.50.850 2 181 7.7E-56 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_2963 0058ba242e3d7e00edf7a79b20f7b486 181 Pfam PF00857 Isochorismatase family 5 147 2.9E-42 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 Gene3D G3DSA:3.30.450.20 253 285 1.9E-6 T 14-10-2018 TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 537 648 5.7E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 Gene3D G3DSA:3.30.565.10 493 654 5.9E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 SUPERFAMILY SSF55874 479 648 5.24E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 628 7.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 588 7.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 647 7.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 SUPERFAMILY SSF47384 408 491 5.89E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 SMART SM00388 422 490 3.0E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 SMART SM00387 536 650 9.7E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 Pfam PF00512 His Kinase A (phospho-acceptor) domain 423 490 2.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 Gene3D G3DSA:1.10.287.130 388 488 7.3E-27 T 14-10-2018 TMO_d0006 9abbb1aa07f6db59e2581e5be6d55878 668 Gene3D G3DSA:3.30.450.20 207 252 1.9E-6 T 14-10-2018 TMO_0965 f4460bb73aa4c74e08f5fb1e6c971a9d 308 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 227 239 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site TMO_0965 f4460bb73aa4c74e08f5fb1e6c971a9d 308 Pfam PF00348 Polyprenyl synthetase 43 280 1.0E-52 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 TMO_0965 f4460bb73aa4c74e08f5fb1e6c971a9d 308 Gene3D G3DSA:1.10.600.10 12 308 4.4E-94 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily TMO_0965 f4460bb73aa4c74e08f5fb1e6c971a9d 308 SUPERFAMILY SSF48576 38 297 5.76E-78 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily TMO_0965 f4460bb73aa4c74e08f5fb1e6c971a9d 308 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 93 109 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site TMO_b0410 ec70bf803dbf3c002f53a3a7aadff6fa 345 Pfam PF13458 Periplasmic binding protein 2 297 1.0E-55 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_b0410 ec70bf803dbf3c002f53a3a7aadff6fa 345 Gene3D G3DSA:3.40.50.2300 3 295 7.6E-64 T 14-10-2018 TMO_b0410 ec70bf803dbf3c002f53a3a7aadff6fa 345 SUPERFAMILY SSF53822 3 297 1.61E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_b0410 ec70bf803dbf3c002f53a3a7aadff6fa 345 Gene3D G3DSA:3.40.50.2300 115 254 7.6E-64 T 14-10-2018 TMO_0180 f02c5f2707b111a4de44be53863c0fcb 209 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 56 201 4.1E-12 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related TMO_0180 f02c5f2707b111a4de44be53863c0fcb 209 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 73 202 1.2E-14 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 TMO_1115 67c785555d6a20fd50aeafd22e46e2e4 289 SUPERFAMILY SSF53850 97 248 1.39E-12 T 14-10-2018 TMO_1115 67c785555d6a20fd50aeafd22e46e2e4 289 Gene3D G3DSA:1.10.10.10 1 91 4.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1115 67c785555d6a20fd50aeafd22e46e2e4 289 Pfam PF03466 LysR substrate binding domain 187 250 1.6E-8 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1115 67c785555d6a20fd50aeafd22e46e2e4 289 Gene3D G3DSA:3.40.190.10 103 173 1.4E-27 T 14-10-2018 TMO_1115 67c785555d6a20fd50aeafd22e46e2e4 289 Gene3D G3DSA:3.40.190.10 174 263 1.4E-27 T 14-10-2018 TMO_1115 67c785555d6a20fd50aeafd22e46e2e4 289 SUPERFAMILY SSF46785 6 114 7.81E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1115 67c785555d6a20fd50aeafd22e46e2e4 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1115 67c785555d6a20fd50aeafd22e46e2e4 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1115 67c785555d6a20fd50aeafd22e46e2e4 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1115 67c785555d6a20fd50aeafd22e46e2e4 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 71 1.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0496 c9381c336d5dc3f37c061b27afcf94f4 584 Gene3D G3DSA:2.30.38.10 373 474 1.9E-17 T 14-10-2018 TMO_b0496 c9381c336d5dc3f37c061b27afcf94f4 584 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0496 c9381c336d5dc3f37c061b27afcf94f4 584 Gene3D G3DSA:3.30.300.30 475 582 1.4E-21 T 14-10-2018 TMO_b0496 c9381c336d5dc3f37c061b27afcf94f4 584 Pfam PF00501 AMP-binding enzyme 21 470 2.7E-63 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0496 c9381c336d5dc3f37c061b27afcf94f4 584 Pfam PF13193 AMP-binding enzyme C-terminal domain 484 559 2.1E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0496 c9381c336d5dc3f37c061b27afcf94f4 584 SUPERFAMILY SSF56801 16 572 1.31E-105 T 14-10-2018 TMO_b0496 c9381c336d5dc3f37c061b27afcf94f4 584 Gene3D G3DSA:3.40.50.12780 9 365 2.2E-54 T 14-10-2018 TMO_b0236 a6760ba4754c98d662ec5bf97337db08 260 SUPERFAMILY SSF52540 11 257 6.63E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0236 a6760ba4754c98d662ec5bf97337db08 260 Pfam PF00005 ABC transporter 28 187 3.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0236 a6760ba4754c98d662ec5bf97337db08 260 Gene3D G3DSA:3.40.50.300 2 258 5.0E-55 T 14-10-2018 TMO_b0236 a6760ba4754c98d662ec5bf97337db08 260 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 236 258 1.8E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_b0236 a6760ba4754c98d662ec5bf97337db08 260 SMART SM00382 37 236 1.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0236 a6760ba4754c98d662ec5bf97337db08 260 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2232 9069c3051a036f077d6a2f526703a56e 155 Pfam PF03713 Domain of unknown function (DUF305) 97 152 9.2E-13 T 14-10-2018 IPR005183 Domain of unknown function DUF305 TMO_2232 9069c3051a036f077d6a2f526703a56e 155 Gene3D G3DSA:1.20.1260.10 64 155 3.5E-13 T 14-10-2018 IPR012347 Ferritin-like TMO_2168 deb50ab3542e8b8d491254e136a3d0bb 263 Gene3D G3DSA:3.40.1350.60 100 257 4.3E-39 T 14-10-2018 TMO_2168 deb50ab3542e8b8d491254e136a3d0bb 263 Gene3D G3DSA:2.40.50.580 20 99 8.4E-27 T 14-10-2018 TMO_2168 deb50ab3542e8b8d491254e136a3d0bb 263 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 20 258 47.92 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein TMO_2168 deb50ab3542e8b8d491254e136a3d0bb 263 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 23 256 4.6E-49 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein TMO_2168 deb50ab3542e8b8d491254e136a3d0bb 263 Pfam PF03749 Sugar fermentation stimulation protein 32 248 1.3E-61 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein TMO_1788 3a3beaeefd2aa2f680deda61c96191ce 330 Gene3D G3DSA:1.10.10.10 222 330 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1788 3a3beaeefd2aa2f680deda61c96191ce 330 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 287 303 3.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_1788 3a3beaeefd2aa2f680deda61c96191ce 330 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 273 287 3.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_1788 3a3beaeefd2aa2f680deda61c96191ce 330 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 303 315 3.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_1788 3a3beaeefd2aa2f680deda61c96191ce 330 SMART SM00421 270 327 2.3E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_1788 3a3beaeefd2aa2f680deda61c96191ce 330 Pfam PF00196 Bacterial regulatory proteins, luxR family 272 326 8.6E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_1788 3a3beaeefd2aa2f680deda61c96191ce 330 SUPERFAMILY SSF46894 261 326 4.08E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 SUPERFAMILY SSF51419 34 253 1.6E-59 T 14-10-2018 IPR029066 PLP-binding barrel TMO_0216 1a241db9809e698770e7d0cdd566c733 388 SUPERFAMILY SSF50621 253 387 1.12E-47 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 SMART SM01005 260 386 3.8E-67 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 TIGRFAM TIGR00492 alr: alanine racemase 30 386 5.4E-74 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 57 67 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 Gene3D G3DSA:3.20.20.10 36 247 5.2E-119 T 14-10-2018 IPR029066 PLP-binding barrel TMO_0216 1a241db9809e698770e7d0cdd566c733 388 PRINTS PR00992 Alanine racemase signature 52 68 9.8E-48 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 PRINTS PR00992 Alanine racemase signature 222 249 9.8E-48 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 PRINTS PR00992 Alanine racemase signature 88 106 9.8E-48 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 PRINTS PR00992 Alanine racemase signature 184 195 9.8E-48 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 PRINTS PR00992 Alanine racemase signature 293 308 9.8E-48 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 PRINTS PR00992 Alanine racemase signature 368 381 9.8E-48 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 PRINTS PR00992 Alanine racemase signature 150 162 9.8E-48 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 PRINTS PR00992 Alanine racemase signature 276 291 9.8E-48 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 PRINTS PR00992 Alanine racemase signature 314 331 9.8E-48 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 Pfam PF00842 Alanine racemase, C-terminal domain 260 385 6.9E-40 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 Gene3D G3DSA:2.40.37.10 35 385 5.2E-119 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 Hamap MF_01201 Alanine racemase. 27 386 30.911 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_0216 1a241db9809e698770e7d0cdd566c733 388 Pfam PF01168 Alanine racemase, N-terminal domain 34 249 2.4E-58 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TMO_2698 6c8410863d02879d1b6c97898506423f 184 SUPERFAMILY SSF56420 2 168 1.7E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily TMO_2698 6c8410863d02879d1b6c97898506423f 184 PIRSF PIRSF004749 1 182 4.3E-59 T 14-10-2018 IPR023635 Peptide deformylase TMO_2698 6c8410863d02879d1b6c97898506423f 184 PRINTS PR01576 Peptide deformylase signature 125 154 1.4E-36 T 14-10-2018 IPR023635 Peptide deformylase TMO_2698 6c8410863d02879d1b6c97898506423f 184 PRINTS PR01576 Peptide deformylase signature 106 124 1.4E-36 T 14-10-2018 IPR023635 Peptide deformylase TMO_2698 6c8410863d02879d1b6c97898506423f 184 PRINTS PR01576 Peptide deformylase signature 33 62 1.4E-36 T 14-10-2018 IPR023635 Peptide deformylase TMO_2698 6c8410863d02879d1b6c97898506423f 184 PRINTS PR01576 Peptide deformylase signature 94 105 1.4E-36 T 14-10-2018 IPR023635 Peptide deformylase TMO_2698 6c8410863d02879d1b6c97898506423f 184 Gene3D G3DSA:3.90.45.10 1 171 6.7E-61 T 14-10-2018 IPR036821 Peptide deformylase superfamily TMO_2698 6c8410863d02879d1b6c97898506423f 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 163 1.7E-52 T 14-10-2018 IPR023635 Peptide deformylase TMO_2698 6c8410863d02879d1b6c97898506423f 184 Hamap MF_00163 Peptide deformylase [def]. 2 167 31.316 T 14-10-2018 IPR023635 Peptide deformylase TMO_2698 6c8410863d02879d1b6c97898506423f 184 Pfam PF01327 Polypeptide deformylase 4 157 1.3E-50 T 14-10-2018 IPR023635 Peptide deformylase TMO_3516 4fb573cb8475adb08b5251a8a27e3365 434 SUPERFAMILY SSF55073 225 415 2.2E-48 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_3516 4fb573cb8475adb08b5251a8a27e3365 434 Gene3D G3DSA:3.30.70.1230 221 424 1.3E-48 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_3516 4fb573cb8475adb08b5251a8a27e3365 434 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 231 414 3.0E-25 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_3516 4fb573cb8475adb08b5251a8a27e3365 434 SMART SM00044 196 397 1.4E-6 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_1650 b194395988de2e4fd0c2c075f14b7afb 142 SUPERFAMILY SSF51344 6 88 1.7E-17 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1650 b194395988de2e4fd0c2c075f14b7afb 142 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 135 12.644 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1650 b194395988de2e4fd0c2c075f14b7afb 142 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 31 75 1.0E-4 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1650 b194395988de2e4fd0c2c075f14b7afb 142 Gene3D G3DSA:2.60.15.10 2 134 1.2E-20 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1650 b194395988de2e4fd0c2c075f14b7afb 142 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 9.4E-16 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_0606 567ebca6aeb20f5c919b117e4fc516ba 371 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 341 9.6E-83 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TMO_0606 567ebca6aeb20f5c919b117e4fc516ba 371 SUPERFAMILY SSF51395 8 365 7.89E-121 T 14-10-2018 TMO_0606 567ebca6aeb20f5c919b117e4fc516ba 371 Gene3D G3DSA:3.20.20.70 8 370 2.1E-143 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2339 bab40a226353ace53730108d70a0faa1 208 SUPERFAMILY SSF52540 1 205 5.4E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2339 bab40a226353ace53730108d70a0faa1 208 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 162 4.5E-14 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TMO_2339 bab40a226353ace53730108d70a0faa1 208 Gene3D G3DSA:3.40.50.300 1 205 3.5E-46 T 14-10-2018 TMO_2339 bab40a226353ace53730108d70a0faa1 208 PIRSF PIRSF009320 1 208 2.5E-47 T 14-10-2018 TMO_0397 0050c6f5252b34366a3352dc04b61c1f 437 Pfam PF01266 FAD dependent oxidoreductase 44 394 2.7E-52 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_0397 0050c6f5252b34366a3352dc04b61c1f 437 SUPERFAMILY SSF51905 43 427 7.34E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0397 0050c6f5252b34366a3352dc04b61c1f 437 Gene3D G3DSA:3.50.50.60 44 396 4.8E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0397 0050c6f5252b34366a3352dc04b61c1f 437 Gene3D G3DSA:3.30.9.10 136 357 4.8E-71 T 14-10-2018 TMO_b0173 e8c0b874ebd4d1058dc79e8dfdfdf4be 452 Gene3D G3DSA:3.30.1330.120 268 397 1.7E-98 T 14-10-2018 TMO_b0173 e8c0b874ebd4d1058dc79e8dfdfdf4be 452 SUPERFAMILY SSF103378 22 450 1.7E-101 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 TMO_b0173 e8c0b874ebd4d1058dc79e8dfdfdf4be 452 Gene3D G3DSA:1.10.4100.10 27 413 1.7E-98 T 14-10-2018 TMO_b0173 e8c0b874ebd4d1058dc79e8dfdfdf4be 452 Pfam PF03972 MmgE/PrpD family 23 426 6.8E-108 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 TMO_a0551 b55b5e1d1a4d2774f72992b2fab22ce9 352 Gene3D G3DSA:2.60.120.10 9 352 1.7E-119 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_a0551 b55b5e1d1a4d2774f72992b2fab22ce9 352 Pfam PF07883 Cupin domain 96 163 3.0E-20 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_a0551 b55b5e1d1a4d2774f72992b2fab22ce9 352 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 12 348 2.3E-155 T 14-10-2018 IPR011960 Gentisate 1,2-dioxygenase TMO_a0551 b55b5e1d1a4d2774f72992b2fab22ce9 352 SUPERFAMILY SSF51182 12 348 3.38E-103 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_3137 03e59c7708032610ad02fe315847e68b 404 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 TMO_3137 03e59c7708032610ad02fe315847e68b 404 Gene3D G3DSA:3.30.9.50 79 269 1.4E-102 T 14-10-2018 TMO_3137 03e59c7708032610ad02fe315847e68b 404 Gene3D G3DSA:3.50.50.60 7 338 1.4E-102 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3137 03e59c7708032610ad02fe315847e68b 404 SUPERFAMILY SSF51905 7 385 1.34E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3137 03e59c7708032610ad02fe315847e68b 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 9.9E-135 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 TMO_3137 03e59c7708032610ad02fe315847e68b 404 Pfam PF01494 FAD binding domain 8 347 1.7E-27 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 TMO_3137 03e59c7708032610ad02fe315847e68b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 4.2E-18 T 14-10-2018 TMO_3137 03e59c7708032610ad02fe315847e68b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 4.2E-18 T 14-10-2018 TMO_3137 03e59c7708032610ad02fe315847e68b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 4.2E-18 T 14-10-2018 TMO_3137 03e59c7708032610ad02fe315847e68b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.2E-18 T 14-10-2018 TMO_2603 78f593fe6b1b1b692b36ebcc302eb346 326 SMART SM00363 17 80 2.3E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2603 78f593fe6b1b1b692b36ebcc302eb346 326 Pfam PF00849 RNA pseudouridylate synthase 104 257 7.8E-37 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_2603 78f593fe6b1b1b692b36ebcc302eb346 326 SUPERFAMILY SSF55174 16 69 1.16E-9 T 14-10-2018 TMO_2603 78f593fe6b1b1b692b36ebcc302eb346 326 SUPERFAMILY SSF55120 96 321 3.52E-59 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_2603 78f593fe6b1b1b692b36ebcc302eb346 326 Gene3D G3DSA:3.10.290.10 5 68 4.5E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TMO_2603 78f593fe6b1b1b692b36ebcc302eb346 326 Pfam PF01479 S4 domain 17 63 8.7E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2603 78f593fe6b1b1b692b36ebcc302eb346 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 317 4.5E-58 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_2603 78f593fe6b1b1b692b36ebcc302eb346 326 Gene3D G3DSA:3.30.2350.10 96 319 2.8E-64 T 14-10-2018 TMO_b0222 0f391c2961ea20dd997846f966229550 793 Pfam PF07715 TonB-dependent Receptor Plug Domain 163 265 5.4E-22 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_b0222 0f391c2961ea20dd997846f966229550 793 SMART SM00965 69 120 7.0E-13 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_b0222 0f391c2961ea20dd997846f966229550 793 SUPERFAMILY SSF56935 124 793 5.74E-132 T 14-10-2018 TMO_b0222 0f391c2961ea20dd997846f966229550 793 Gene3D G3DSA:2.40.170.20 276 793 1.6E-122 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_b0222 0f391c2961ea20dd997846f966229550 793 Gene3D G3DSA:3.55.50.30 38 139 2.0E-27 T 14-10-2018 TMO_b0222 0f391c2961ea20dd997846f966229550 793 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 164 792 5.0E-111 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_b0222 0f391c2961ea20dd997846f966229550 793 Gene3D G3DSA:2.170.130.10 140 275 8.2E-40 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_b0222 0f391c2961ea20dd997846f966229550 793 Pfam PF00593 TonB dependent receptor 344 792 2.2E-57 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_b0222 0f391c2961ea20dd997846f966229550 793 Pfam PF07660 Secretin and TonB N terminus short domain 69 114 4.9E-8 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_2609 f97b530ae69c14ba2276fc78fba5dde8 130 PIRSF PIRSF002131 1 130 4.7E-55 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TMO_2609 f97b530ae69c14ba2276fc78fba5dde8 130 SUPERFAMILY SSF53137 15 130 1.79E-50 T 14-10-2018 TMO_2609 f97b530ae69c14ba2276fc78fba5dde8 130 Gene3D G3DSA:3.30.420.80 2 130 1.7E-55 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 TMO_2609 f97b530ae69c14ba2276fc78fba5dde8 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site TMO_2609 f97b530ae69c14ba2276fc78fba5dde8 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 34.183 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TMO_2609 f97b530ae69c14ba2276fc78fba5dde8 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 127 3.3E-59 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2609 f97b530ae69c14ba2276fc78fba5dde8 130 Pfam PF00411 Ribosomal protein S11 20 129 2.1E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 310 333 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 Pfam PF00375 Sodium:dicarboxylate symporter family 24 416 2.6E-105 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 SUPERFAMILY SSF118215 24 417 1.57E-116 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 17 443 38.491 T 14-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 Gene3D G3DSA:1.10.3860.10 15 431 3.6E-122 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 PRINTS PR00173 Glutamate-aspartate symporter signature 89 114 8.4E-29 T 14-10-2018 TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 PRINTS PR00173 Glutamate-aspartate symporter signature 307 333 8.4E-29 T 14-10-2018 TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 PRINTS PR00173 Glutamate-aspartate symporter signature 160 182 8.4E-29 T 14-10-2018 TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 PRINTS PR00173 Glutamate-aspartate symporter signature 342 361 8.4E-29 T 14-10-2018 TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 PRINTS PR00173 Glutamate-aspartate symporter signature 22 42 8.4E-29 T 14-10-2018 TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 8.4E-29 T 14-10-2018 TMO_c0526 dba268267ebfde41827c8fd0ce96918a 471 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 51 66 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site TMO_c0484 c19d56ec1201ede808b1f440ed6bb341 582 ProSitePatterns PS00455 Putative AMP-binding domain signature. 230 241 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0484 c19d56ec1201ede808b1f440ed6bb341 582 Gene3D G3DSA:3.30.300.30 481 581 7.7E-26 T 14-10-2018 TMO_c0484 c19d56ec1201ede808b1f440ed6bb341 582 SUPERFAMILY SSF56801 42 579 3.79E-136 T 14-10-2018 TMO_c0484 c19d56ec1201ede808b1f440ed6bb341 582 Pfam PF13193 AMP-binding enzyme C-terminal domain 495 571 1.2E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0484 c19d56ec1201ede808b1f440ed6bb341 582 Gene3D G3DSA:3.40.50.12780 42 479 1.8E-106 T 14-10-2018 TMO_c0484 c19d56ec1201ede808b1f440ed6bb341 582 Pfam PF00501 AMP-binding enzyme 54 486 7.9E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_3369 6c564da336408093be5595d87a739224 206 TIGRFAM TIGR04061 AZL_007950_fam: AZL_007950 family protein 70 205 2.4E-38 T 14-10-2018 IPR023973 Conserved hypothetical protein CHP04061, AZL007950 TMO_3369 6c564da336408093be5595d87a739224 206 TIGRFAM TIGR04160 methbact_MbnC: methanobactin biosynthesis cassette protein MbnC 116 203 2.2E-25 T 14-10-2018 TMO_c0323 6dfff68049c32931b38b17b0eeb38ba4 626 SUPERFAMILY SSF51556 60 492 2.72E-43 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_c0323 6dfff68049c32931b38b17b0eeb38ba4 626 Gene3D G3DSA:3.10.310.70 80 190 3.8E-85 T 14-10-2018 TMO_c0323 6dfff68049c32931b38b17b0eeb38ba4 626 Gene3D G3DSA:2.30.40.10 8 508 3.8E-85 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_c0323 6dfff68049c32931b38b17b0eeb38ba4 626 Pfam PF07969 Amidohydrolase family 49 533 1.6E-115 T 14-10-2018 IPR013108 Amidohydrolase 3 TMO_c0323 6dfff68049c32931b38b17b0eeb38ba4 626 SUPERFAMILY SSF51338 1 538 2.85E-23 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_c0323 6dfff68049c32931b38b17b0eeb38ba4 626 Gene3D G3DSA:3.20.20.140 61 492 3.8E-85 T 14-10-2018 TMO_2022 9c61775cf71d80ba6b4f37b3ee6bc1cc 256 Gene3D G3DSA:3.20.20.370 5 255 4.2E-8 T 14-10-2018 TMO_2022 9c61775cf71d80ba6b4f37b3ee6bc1cc 256 SUPERFAMILY SSF88713 30 242 6.95E-9 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_c0385 f78139ca9e151f8f243a9fddcfbb7822 220 Gene3D G3DSA:3.90.320.10 7 194 9.3E-10 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal TMO_c0385 f78139ca9e151f8f243a9fddcfbb7822 220 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 11 192 1.2E-29 T 14-10-2018 IPR013343 CRISPR-associated protein Cas4 TMO_c0385 f78139ca9e151f8f243a9fddcfbb7822 220 Pfam PF01930 Domain of unknown function DUF83 12 192 2.0E-28 T 14-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 TMO_1698 644367919535b3050a4026dd5ebbfe75 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 291 309 9.2E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_1698 644367919535b3050a4026dd5ebbfe75 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 245 263 9.2E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_1698 644367919535b3050a4026dd5ebbfe75 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 224 244 9.2E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_1698 644367919535b3050a4026dd5ebbfe75 455 Pfam PF01926 50S ribosome-binding GTPase 224 324 7.7E-17 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 TMO_1698 644367919535b3050a4026dd5ebbfe75 455 PIRSF PIRSF006809 17 449 3.6E-135 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 TMO_1698 644367919535b3050a4026dd5ebbfe75 455 Gene3D G3DSA:3.40.50.11060 41 161 7.4E-35 T 14-10-2018 TMO_1698 644367919535b3050a4026dd5ebbfe75 455 Gene3D G3DSA:3.40.50.300 221 391 3.0E-34 T 14-10-2018 TMO_1698 644367919535b3050a4026dd5ebbfe75 455 SUPERFAMILY SSF52540 222 389 1.9E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1698 644367919535b3050a4026dd5ebbfe75 455 Pfam PF13167 GTP-binding GTPase N-terminal 48 135 1.0E-24 T 14-10-2018 IPR025121 GTPase HflX, N-terminal TMO_1698 644367919535b3050a4026dd5ebbfe75 455 Pfam PF16360 GTP-binding GTPase Middle Region 137 216 3.8E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain TMO_1698 644367919535b3050a4026dd5ebbfe75 455 Hamap MF_00900 GTPase HflX [hflX]. 50 418 45.628 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 TMO_1698 644367919535b3050a4026dd5ebbfe75 455 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 46 388 3.4E-127 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 TMO_0767 8da7be1a611ed3587ed332e06ac611c8 508 SMART SM00155 137 164 0.009 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TMO_0767 8da7be1a611ed3587ed332e06ac611c8 508 SMART SM00155 351 378 0.0021 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TMO_0767 8da7be1a611ed3587ed332e06ac611c8 508 Gene3D G3DSA:3.30.870.10 17 228 4.3E-25 T 14-10-2018 TMO_0767 8da7be1a611ed3587ed332e06ac611c8 508 SUPERFAMILY SSF56024 258 395 3.14E-24 T 14-10-2018 TMO_0767 8da7be1a611ed3587ed332e06ac611c8 508 Pfam PF00614 Phospholipase D Active site motif 140 164 5.3E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TMO_0767 8da7be1a611ed3587ed332e06ac611c8 508 Gene3D G3DSA:3.30.870.10 253 400 7.0E-19 T 14-10-2018 TMO_0767 8da7be1a611ed3587ed332e06ac611c8 508 SUPERFAMILY SSF56024 10 249 5.38E-30 T 14-10-2018 TMO_0767 8da7be1a611ed3587ed332e06ac611c8 508 Pfam PF13091 PLD-like domain 265 392 1.4E-11 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TMO_3236 a281cadb69399412d73c56205e70dd4e 339 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 3.0E-112 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_3236 a281cadb69399412d73c56205e70dd4e 339 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 282 38.299 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_3236 a281cadb69399412d73c56205e70dd4e 339 SUPERFAMILY SSF52096 26 283 2.95E-80 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_3236 a281cadb69399412d73c56205e70dd4e 339 Gene3D G3DSA:3.90.226.10 26 285 2.2E-79 T 14-10-2018 TMO_3236 a281cadb69399412d73c56205e70dd4e 339 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 4.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_3236 a281cadb69399412d73c56205e70dd4e 339 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 4.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_3236 a281cadb69399412d73c56205e70dd4e 339 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 4.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_3236 a281cadb69399412d73c56205e70dd4e 339 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 4.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_3236 a281cadb69399412d73c56205e70dd4e 339 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 4.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_3236 a281cadb69399412d73c56205e70dd4e 339 Pfam PF01039 Carboxyl transferase domain 101 307 3.9E-16 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 TMO_2097 ed4ae293126e0846ba57e21efaffc305 249 SUPERFAMILY SSF52540 22 242 2.0E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2097 ed4ae293126e0846ba57e21efaffc305 249 SMART SM00382 53 245 4.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2097 ed4ae293126e0846ba57e21efaffc305 249 Gene3D G3DSA:3.40.50.300 22 244 2.4E-46 T 14-10-2018 TMO_2097 ed4ae293126e0846ba57e21efaffc305 249 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2097 ed4ae293126e0846ba57e21efaffc305 249 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 22 241 9.3E-96 T 14-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_2097 ed4ae293126e0846ba57e21efaffc305 249 Pfam PF00005 ABC transporter 44 198 3.8E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2964 06d738f76a2e8122be8dc045e77fe464 328 SUPERFAMILY SSF46689 271 321 1.79E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2964 06d738f76a2e8122be8dc045e77fe464 328 Pfam PF01965 DJ-1/PfpI family 77 180 5.6E-9 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_2964 06d738f76a2e8122be8dc045e77fe464 328 SUPERFAMILY SSF52317 10 199 3.14E-33 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_2964 06d738f76a2e8122be8dc045e77fe464 328 Pfam PF12833 Helix-turn-helix domain 241 320 2.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2964 06d738f76a2e8122be8dc045e77fe464 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 272 314 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_2964 06d738f76a2e8122be8dc045e77fe464 328 SMART SM00342 235 318 3.3E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2964 06d738f76a2e8122be8dc045e77fe464 328 Gene3D G3DSA:1.10.10.60 220 322 1.5E-26 T 14-10-2018 TMO_2964 06d738f76a2e8122be8dc045e77fe464 328 SUPERFAMILY SSF46689 219 269 3.07E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2964 06d738f76a2e8122be8dc045e77fe464 328 Gene3D G3DSA:3.40.50.880 7 207 1.0E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_c0547 705485379a47b0626a41bddd5d5c4294 214 SUPERFAMILY SSF53335 1 196 4.62E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0547 705485379a47b0626a41bddd5d5c4294 214 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 211 36.429 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 TMO_c0547 705485379a47b0626a41bddd5d5c4294 214 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 192 1.4E-57 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 TMO_c0547 705485379a47b0626a41bddd5d5c4294 214 PIRSF PIRSF023956 1 213 2.9E-70 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 TMO_c0547 705485379a47b0626a41bddd5d5c4294 214 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 209 2.9E-74 T 14-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 TMO_c0547 705485379a47b0626a41bddd5d5c4294 214 Gene3D G3DSA:3.40.50.150 1 211 3.6E-51 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 Gene3D G3DSA:3.50.30.20 11 160 1.5E-50 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 SUPERFAMILY SSF52021 13 153 1.23E-51 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 Pfam PF00117 Glutamine amidotransferase class-I 205 380 6.7E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 315 326 5.1E-36 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 202 216 5.1E-36 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 255 5.1E-36 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 273 289 5.1E-36 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 290 307 5.1E-36 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 SUPERFAMILY SSF52317 167 385 1.0E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 PRINTS PR00096 Glutamine amidotransferase superfamily signature 273 284 8.2E-12 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 PRINTS PR00096 Glutamine amidotransferase superfamily signature 358 371 8.2E-12 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 PRINTS PR00096 Glutamine amidotransferase superfamily signature 244 253 8.2E-12 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 PRINTS PR00097 Anthranilate synthase component II signature 358 371 2.8E-6 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 PRINTS PR00097 Anthranilate synthase component II signature 244 253 2.8E-6 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 PRINTS PR00097 Anthranilate synthase component II signature 273 284 2.8E-6 T 14-10-2018 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 12 387 46.388 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 SMART SM01097 12 142 1.5E-77 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 14 384 1.7E-133 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 14 141 4.1E-46 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_c0109 1593c4090d653f00a2919e64d0adb1ab 390 Gene3D G3DSA:3.40.50.880 163 387 9.8E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_a0434 21d4e23eaa079dbe936217599586e70f 503 Gene3D G3DSA:3.40.1080.10 5 185 9.1E-16 T 14-10-2018 TMO_a0434 21d4e23eaa079dbe936217599586e70f 503 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 11 223 1.5E-29 T 14-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 TMO_a0434 21d4e23eaa079dbe936217599586e70f 503 SUPERFAMILY SSF100950 233 493 2.61E-79 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_a0434 21d4e23eaa079dbe936217599586e70f 503 Gene3D G3DSA:3.40.1080.20 343 485 3.6E-41 T 14-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily TMO_a0434 21d4e23eaa079dbe936217599586e70f 503 Gene3D G3DSA:3.30.750.70 231 319 1.1E-5 T 14-10-2018 TMO_a0434 21d4e23eaa079dbe936217599586e70f 503 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 13 493 4.1E-236 T 14-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 TMO_a0434 21d4e23eaa079dbe936217599586e70f 503 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 336 470 5.0E-44 T 14-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain TMO_a0434 21d4e23eaa079dbe936217599586e70f 503 SUPERFAMILY SSF100950 5 229 9.42E-72 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_0434 866c3c0d00a0d7a2f6ac6396e0f36e1a 375 SUPERFAMILY SSF53850 51 371 3.07E-44 T 14-10-2018 TMO_0434 866c3c0d00a0d7a2f6ac6396e0f36e1a 375 Gene3D G3DSA:3.40.190.10 159 280 2.6E-41 T 14-10-2018 TMO_0434 866c3c0d00a0d7a2f6ac6396e0f36e1a 375 Pfam PF13416 Bacterial extracellular solute-binding protein 71 342 1.8E-40 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_0434 866c3c0d00a0d7a2f6ac6396e0f36e1a 375 Gene3D G3DSA:3.40.190.10 54 370 2.6E-41 T 14-10-2018 TMO_a0134 f0074db81713ae54c84cdec1957d8b20 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0134 f0074db81713ae54c84cdec1957d8b20 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0134 f0074db81713ae54c84cdec1957d8b20 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0134 f0074db81713ae54c84cdec1957d8b20 305 Gene3D G3DSA:1.10.10.10 1 91 3.0E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0134 f0074db81713ae54c84cdec1957d8b20 305 Pfam PF03466 LysR substrate binding domain 96 287 4.8E-29 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_a0134 f0074db81713ae54c84cdec1957d8b20 305 SUPERFAMILY SSF46785 1 85 3.33E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0134 f0074db81713ae54c84cdec1957d8b20 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 7.0E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0134 f0074db81713ae54c84cdec1957d8b20 305 Gene3D G3DSA:3.40.190.10 96 285 2.7E-32 T 14-10-2018 TMO_a0134 f0074db81713ae54c84cdec1957d8b20 305 Gene3D G3DSA:3.40.190.10 163 266 2.7E-32 T 14-10-2018 TMO_a0134 f0074db81713ae54c84cdec1957d8b20 305 SUPERFAMILY SSF53850 94 293 2.17E-28 T 14-10-2018 TMO_1232 38777efd9b29fae30dfe019043dcb5c9 330 Gene3D G3DSA:3.40.50.300 17 247 1.4E-66 T 14-10-2018 TMO_1232 38777efd9b29fae30dfe019043dcb5c9 330 Pfam PF00005 ABC transporter 41 183 4.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1232 38777efd9b29fae30dfe019043dcb5c9 330 SUPERFAMILY SSF52540 18 244 9.8E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1232 38777efd9b29fae30dfe019043dcb5c9 330 SMART SM00382 48 305 1.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3192 e8cfb21e393d8b97fa6bd4ca346bbb4e 295 Gene3D G3DSA:3.30.70.260 196 284 5.8E-18 T 14-10-2018 TMO_3192 e8cfb21e393d8b97fa6bd4ca346bbb4e 295 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 165 187 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 TMO_3192 e8cfb21e393d8b97fa6bd4ca346bbb4e 295 Gene3D G3DSA:3.40.190.10 98 178 1.0E-25 T 14-10-2018 TMO_3192 e8cfb21e393d8b97fa6bd4ca346bbb4e 295 Gene3D G3DSA:3.40.190.10 9 97 1.8E-27 T 14-10-2018 TMO_3192 e8cfb21e393d8b97fa6bd4ca346bbb4e 295 Pfam PF00800 Prephenate dehydratase 15 191 3.3E-52 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 TMO_3192 e8cfb21e393d8b97fa6bd4ca346bbb4e 295 SUPERFAMILY SSF55021 184 282 1.47E-20 T 14-10-2018 TMO_3192 e8cfb21e393d8b97fa6bd4ca346bbb4e 295 PIRSF PIRSF001500 4 284 1.4E-61 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 TMO_3192 e8cfb21e393d8b97fa6bd4ca346bbb4e 295 SUPERFAMILY SSF53850 15 196 7.71E-57 T 14-10-2018 TMO_2866 cc43e42e2d40250aff77075363f335e3 320 Gene3D G3DSA:1.10.10.10 14 97 3.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2866 cc43e42e2d40250aff77075363f335e3 320 Gene3D G3DSA:3.40.190.10 103 294 2.9E-25 T 14-10-2018 TMO_2866 cc43e42e2d40250aff77075363f335e3 320 SUPERFAMILY SSF46785 13 99 4.27E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2866 cc43e42e2d40250aff77075363f335e3 320 SUPERFAMILY SSF53850 100 311 2.64E-32 T 14-10-2018 TMO_2866 cc43e42e2d40250aff77075363f335e3 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 4.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2866 cc43e42e2d40250aff77075363f335e3 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 4.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2866 cc43e42e2d40250aff77075363f335e3 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 4.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2866 cc43e42e2d40250aff77075363f335e3 320 Pfam PF03466 LysR substrate binding domain 100 304 7.3E-29 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2866 cc43e42e2d40250aff77075363f335e3 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 8.0E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2866 cc43e42e2d40250aff77075363f335e3 320 Gene3D G3DSA:3.40.190.10 176 281 2.9E-25 T 14-10-2018 TMO_2955 64d62e339e5bd8fb0d68790682473197 401 PIRSF PIRSF001434 1 394 5.3E-144 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_2955 64d62e339e5bd8fb0d68790682473197 401 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 6 391 8.4E-186 T 14-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 TMO_2955 64d62e339e5bd8fb0d68790682473197 401 Gene3D G3DSA:3.90.1150.10 260 398 2.5E-55 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_2955 64d62e339e5bd8fb0d68790682473197 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 391 1.8E-139 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_2955 64d62e339e5bd8fb0d68790682473197 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_2955 64d62e339e5bd8fb0d68790682473197 401 SUPERFAMILY SSF53383 27 391 1.11E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_2955 64d62e339e5bd8fb0d68790682473197 401 Gene3D G3DSA:3.40.640.10 6 259 1.3E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0529 017e344effbf0968a8fdb458b42f1bad 291 Gene3D G3DSA:3.40.50.1820 2 290 3.9E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0529 017e344effbf0968a8fdb458b42f1bad 291 Pfam PF12146 Serine aminopeptidase, S33 28 273 1.1E-49 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 TMO_c0529 017e344effbf0968a8fdb458b42f1bad 291 SUPERFAMILY SSF53474 8 288 3.02E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0238 0b79084b6152c3fcb0e489af3187e26d 2224 SUPERFAMILY SSF103515 1924 2224 6.93E-50 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_0238 0b79084b6152c3fcb0e489af3187e26d 2224 Pfam PF03797 Autotransporter beta-domain 1937 2203 1.9E-51 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_0238 0b79084b6152c3fcb0e489af3187e26d 2224 SMART SM00869 1934 2214 1.0E-41 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_0238 0b79084b6152c3fcb0e489af3187e26d 2224 Gene3D G3DSA:2.40.128.130 1913 2223 5.6E-59 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_a0520 59961721186cc3c9551cbb07fd24c15a 388 PIRSF PIRSF016578 3 93 3.3E-4 T 14-10-2018 TMO_a0520 59961721186cc3c9551cbb07fd24c15a 388 PIRSF PIRSF016578 138 375 1.8E-11 T 14-10-2018 TMO_a0520 59961721186cc3c9551cbb07fd24c15a 388 Gene3D G3DSA:1.20.140.10 238 382 2.0E-38 T 14-10-2018 TMO_a0520 59961721186cc3c9551cbb07fd24c15a 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 119 1.6E-25 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_a0520 59961721186cc3c9551cbb07fd24c15a 388 SUPERFAMILY SSF47203 231 385 8.38E-44 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_a0520 59961721186cc3c9551cbb07fd24c15a 388 SUPERFAMILY SSF56645 2 246 7.85E-61 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_a0520 59961721186cc3c9551cbb07fd24c15a 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 4.8E-36 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_a0520 59961721186cc3c9551cbb07fd24c15a 388 Gene3D G3DSA:2.40.110.10 122 237 6.1E-30 T 14-10-2018 TMO_a0520 59961721186cc3c9551cbb07fd24c15a 388 Gene3D G3DSA:1.10.540.10 1 120 3.9E-29 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_a0520 59961721186cc3c9551cbb07fd24c15a 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 220 6.3E-19 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_1913 356e0cffcf6ec4518daa797ad545502f 544 Pfam PF00501 AMP-binding enzyme 17 441 4.1E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_1913 356e0cffcf6ec4518daa797ad545502f 544 Gene3D G3DSA:3.40.50.12780 1 436 6.3E-123 T 14-10-2018 TMO_1913 356e0cffcf6ec4518daa797ad545502f 544 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_1913 356e0cffcf6ec4518daa797ad545502f 544 SUPERFAMILY SSF56801 11 538 6.41E-134 T 14-10-2018 TMO_1913 356e0cffcf6ec4518daa797ad545502f 544 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 525 1.1E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_1913 356e0cffcf6ec4518daa797ad545502f 544 Gene3D G3DSA:3.30.300.310 437 538 4.5E-30 T 14-10-2018 TMO_c0084 201f56cb0332c48dd4d809a079547a8b 132 Pfam PF00376 MerR family regulatory protein 3 40 1.3E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0084 201f56cb0332c48dd4d809a079547a8b 132 Pfam PF09278 MerR, DNA binding 45 109 1.6E-18 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding TMO_c0084 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.4E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0084 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.4E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0084 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.4E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0084 201f56cb0332c48dd4d809a079547a8b 132 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 2 128 1.3E-51 T 14-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 TMO_c0084 201f56cb0332c48dd4d809a079547a8b 132 Gene3D G3DSA:1.10.1660.10 1 127 2.2E-32 T 14-10-2018 TMO_c0084 201f56cb0332c48dd4d809a079547a8b 132 SMART SM00422 2 71 1.6E-27 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0084 201f56cb0332c48dd4d809a079547a8b 132 SUPERFAMILY SSF46955 2 128 2.23E-32 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily TMO_2870 20ceb0c5b3aad7d42634ee708d7361fd 270 Pfam PF00561 alpha/beta hydrolase fold 24 140 2.9E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2870 20ceb0c5b3aad7d42634ee708d7361fd 270 Gene3D G3DSA:3.40.50.1820 2 267 2.7E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2870 20ceb0c5b3aad7d42634ee708d7361fd 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2870 20ceb0c5b3aad7d42634ee708d7361fd 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 1.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2870 20ceb0c5b3aad7d42634ee708d7361fd 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 1.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2870 20ceb0c5b3aad7d42634ee708d7361fd 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 1.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2870 20ceb0c5b3aad7d42634ee708d7361fd 270 SUPERFAMILY SSF53474 6 266 1.8E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0285 b317b45f7ac33c3c562517e75f78235a 366 Gene3D G3DSA:3.90.1200.10 132 365 1.5E-83 T 14-10-2018 TMO_0285 b317b45f7ac33c3c562517e75f78235a 366 SUPERFAMILY SSF56112 31 339 4.02E-62 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_0285 b317b45f7ac33c3c562517e75f78235a 366 Pfam PF01636 Phosphotransferase enzyme family 53 284 1.3E-53 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase TMO_0285 b317b45f7ac33c3c562517e75f78235a 366 Gene3D G3DSA:3.30.200.20 30 131 8.1E-37 T 14-10-2018 TMO_b0034 dd860854fd1c3ca50abace6da0094ab3 153 Pfam PF07080 Protein of unknown function (DUF1348) 6 134 1.5E-65 T 14-10-2018 IPR009783 Protein of unknown function DUF1348 TMO_b0034 dd860854fd1c3ca50abace6da0094ab3 153 SUPERFAMILY SSF54427 1 153 4.79E-79 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_b0034 dd860854fd1c3ca50abace6da0094ab3 153 Gene3D G3DSA:3.10.450.50 9 153 8.4E-77 T 14-10-2018 TMO_b0466 8625f8a7880025c50d7181ece5317530 347 SMART SM00062 40 271 2.0E-26 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_b0466 8625f8a7880025c50d7181ece5317530 347 Gene3D G3DSA:3.40.190.10 31 255 1.4E-41 T 14-10-2018 TMO_b0466 8625f8a7880025c50d7181ece5317530 347 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 255 5.5E-26 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_b0466 8625f8a7880025c50d7181ece5317530 347 SUPERFAMILY SSF53850 32 263 4.04E-34 T 14-10-2018 TMO_b0466 8625f8a7880025c50d7181ece5317530 347 Gene3D G3DSA:3.40.190.10 134 229 1.4E-41 T 14-10-2018 TMO_1643 d5428e16ff641d0f782a810edd5b07fc 239 SMART SM00382 31 205 3.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1643 d5428e16ff641d0f782a810edd5b07fc 239 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1643 d5428e16ff641d0f782a810edd5b07fc 239 Gene3D G3DSA:3.40.50.300 3 239 1.1E-60 T 14-10-2018 TMO_1643 d5428e16ff641d0f782a810edd5b07fc 239 Pfam PF00005 ABC transporter 22 166 6.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1643 d5428e16ff641d0f782a810edd5b07fc 239 SUPERFAMILY SSF52540 5 229 4.26E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 SUPERFAMILY SSF55681 3 245 2.11E-109 T 14-10-2018 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 Pfam PF02272 DHHA1 domain 745 881 3.3E-19 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 5.6E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 5.6E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 5.6E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 5.6E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 5.6E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 884 194.518 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 865 1.5E-289 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 707 4.3E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 Gene3D G3DSA:3.30.980.10 557 706 1.1E-46 T 14-10-2018 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 Gene3D G3DSA:3.10.310.40 773 884 4.0E-26 T 14-10-2018 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 SUPERFAMILY SSF101353 246 459 7.59E-58 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 SMART SM00863 654 707 1.0E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 SUPERFAMILY SSF50447 453 553 9.18E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 Pfam PF01411 tRNA synthetases class II (A) 6 556 3.5E-214 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 Gene3D G3DSA:3.30.54.20 625 688 1.1E-46 T 14-10-2018 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 Gene3D G3DSA:3.30.930.10 1 241 1.3E-109 T 14-10-2018 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 Gene3D G3DSA:2.40.30.130 466 552 1.6E-8 T 14-10-2018 TMO_1130 dde6e5ce8f13d65b881e3a00b237c951 884 SUPERFAMILY SSF55186 553 722 1.57E-50 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TMO_2760 208748cfcd63744b97888d2ec920a76a 350 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 255 344 1.0E-16 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_2760 208748cfcd63744b97888d2ec920a76a 350 SMART SM00833 255 348 1.8E-4 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_2760 208748cfcd63744b97888d2ec920a76a 350 Gene3D G3DSA:3.30.1220.10 231 347 1.4E-18 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily TMO_2760 208748cfcd63744b97888d2ec920a76a 350 SUPERFAMILY SSF52540 6 229 4.18E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2760 208748cfcd63744b97888d2ec920a76a 350 SUPERFAMILY SSF90002 255 345 1.44E-17 T 14-10-2018 TMO_2760 208748cfcd63744b97888d2ec920a76a 350 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 212 8.2E-56 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_2760 208748cfcd63744b97888d2ec920a76a 350 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 5 344 3.4E-163 T 14-10-2018 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 TMO_2760 208748cfcd63744b97888d2ec920a76a 350 Gene3D G3DSA:3.40.50.300 5 230 4.5E-59 T 14-10-2018 TMO_2848 3fe1d22042777f8f4482e60d1e6ddb26 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 322 1.2E-45 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2848 3fe1d22042777f8f4482e60d1e6ddb26 325 Gene3D G3DSA:1.10.3720.10 89 315 1.1E-27 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2848 3fe1d22042777f8f4482e60d1e6ddb26 325 SUPERFAMILY SSF161098 94 308 2.62E-22 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0354 cd87ce10665d1dd98ef3dee41ec2b81d 262 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 7 96 8.7E-28 T 14-10-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain TMO_a0354 cd87ce10665d1dd98ef3dee41ec2b81d 262 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 101 256 5.5E-46 T 14-10-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system TMO_b0530 d4b4cf626913a08c197db61f9fb9a88a 236 SUPERFAMILY SSF46689 14 83 1.9E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0530 d4b4cf626913a08c197db61f9fb9a88a 236 Gene3D G3DSA:1.10.357.10 12 224 7.7E-29 T 14-10-2018 TMO_b0530 d4b4cf626913a08c197db61f9fb9a88a 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 69 4.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0122 cb63ff4b356d91f9766f96fa96fca29a 191 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 185 1.0E-54 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TMO_0122 cb63ff4b356d91f9766f96fa96fca29a 191 SUPERFAMILY SSF89028 6 186 1.67E-61 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TMO_0122 cb63ff4b356d91f9766f96fa96fca29a 191 Pfam PF01923 Cobalamin adenosyltransferase 7 174 2.0E-61 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TMO_0122 cb63ff4b356d91f9766f96fa96fca29a 191 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 185 1.4E-57 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TMO_0122 cb63ff4b356d91f9766f96fa96fca29a 191 Gene3D G3DSA:1.20.1200.10 17 190 1.5E-58 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TMO_2924 7445b2d58e7fb681cae2e45dcc644be5 667 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 165 9.9E-28 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_2924 7445b2d58e7fb681cae2e45dcc644be5 667 Gene3D G3DSA:2.40.170.20 176 667 9.5E-129 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_2924 7445b2d58e7fb681cae2e45dcc644be5 667 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 650 667 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site TMO_2924 7445b2d58e7fb681cae2e45dcc644be5 667 Gene3D G3DSA:2.170.130.10 40 170 3.0E-45 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_2924 7445b2d58e7fb681cae2e45dcc644be5 667 Pfam PF00593 TonB dependent receptor 254 665 7.8E-54 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_2924 7445b2d58e7fb681cae2e45dcc644be5 667 SUPERFAMILY SSF56935 34 667 2.93E-125 T 14-10-2018 TMO_2180 3f44e4a684aebc629f0753851f91f2dc 247 Pfam PF12833 Helix-turn-helix domain 165 244 7.1E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2180 3f44e4a684aebc629f0753851f91f2dc 247 Gene3D G3DSA:1.10.10.60 144 201 3.6E-17 T 14-10-2018 TMO_2180 3f44e4a684aebc629f0753851f91f2dc 247 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 196 238 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_2180 3f44e4a684aebc629f0753851f91f2dc 247 SMART SM00342 159 242 7.3E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2180 3f44e4a684aebc629f0753851f91f2dc 247 SUPERFAMILY SSF46689 144 193 6.72E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2180 3f44e4a684aebc629f0753851f91f2dc 247 Gene3D G3DSA:1.10.10.60 202 247 1.5E-16 T 14-10-2018 TMO_2180 3f44e4a684aebc629f0753851f91f2dc 247 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 211 226 3.5E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_2180 3f44e4a684aebc629f0753851f91f2dc 247 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 242 3.5E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_2180 3f44e4a684aebc629f0753851f91f2dc 247 SUPERFAMILY SSF46689 195 245 1.93E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2241 b10d32cfb64512505a6cb6ed16ea6ffc 165 Pfam PF09278 MerR, DNA binding 44 108 1.8E-20 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding TMO_2241 b10d32cfb64512505a6cb6ed16ea6ffc 165 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.6E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_2241 b10d32cfb64512505a6cb6ed16ea6ffc 165 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.6E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_2241 b10d32cfb64512505a6cb6ed16ea6ffc 165 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.6E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_2241 b10d32cfb64512505a6cb6ed16ea6ffc 165 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_2241 b10d32cfb64512505a6cb6ed16ea6ffc 165 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 4.4E-57 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 TMO_2241 b10d32cfb64512505a6cb6ed16ea6ffc 165 SUPERFAMILY SSF46955 1 126 1.36E-39 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily TMO_2241 b10d32cfb64512505a6cb6ed16ea6ffc 165 SMART SM00422 1 70 7.9E-35 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_2241 b10d32cfb64512505a6cb6ed16ea6ffc 165 Pfam PF00376 MerR family regulatory protein 2 39 9.0E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_2241 b10d32cfb64512505a6cb6ed16ea6ffc 165 Gene3D G3DSA:1.10.1660.10 1 125 4.7E-36 T 14-10-2018 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 50 72 1.2E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 191 213 1.2E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 224 236 1.2E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 170 185 1.2E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 SUPERFAMILY SSF55174 312 416 2.49E-15 T 14-10-2018 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 Pfam PF01479 S4 domain 359 393 2.0E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 SUPERFAMILY SSF52374 9 328 1.05E-94 T 14-10-2018 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 12 415 2.1E-107 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 Gene3D G3DSA:3.10.290.10 334 403 2.3E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 Pfam PF00579 tRNA synthetases class I (W and Y) 37 329 2.3E-73 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 Gene3D G3DSA:3.40.50.620 2 230 2.0E-85 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 8 417 42.234 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 TMO_c0679 20a2e0f1d2c4d18f686e788e0463882f 418 Gene3D G3DSA:1.10.240.10 231 333 2.5E-31 T 14-10-2018 TMO_2189 228ae69bdc527ec30118d03a6f294ec9 227 Pfam PF04335 VirB8 protein 21 224 1.1E-68 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 TMO_2189 228ae69bdc527ec30118d03a6f294ec9 227 SUPERFAMILY SSF54427 92 226 9.2E-30 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_0162 ac6c3d46233448cd031ef4cd0a81c2e6 264 Pfam PF00005 ABC transporter 22 177 7.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0162 ac6c3d46233448cd031ef4cd0a81c2e6 264 Gene3D G3DSA:3.40.50.300 1 259 3.4E-58 T 14-10-2018 TMO_0162 ac6c3d46233448cd031ef4cd0a81c2e6 264 SUPERFAMILY SSF52540 2 234 8.2E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0162 ac6c3d46233448cd031ef4cd0a81c2e6 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0162 ac6c3d46233448cd031ef4cd0a81c2e6 264 SMART SM00382 31 234 5.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3404 b6f95eb8bd4ccec4ef602cc35d578583 317 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 50 312 54.64 T 14-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein TMO_3404 b6f95eb8bd4ccec4ef602cc35d578583 317 Pfam PF03618 Kinase/pyrophosphorylase 52 306 1.7E-91 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 TMO_3462 dedddfb280492441b5a193c9cb3f36aa 117 Pfam PF03960 ArsC family 10 115 2.3E-15 T 14-10-2018 IPR006660 Arsenate reductase-like TMO_3462 dedddfb280492441b5a193c9cb3f36aa 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 6 116 1.1E-35 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 TMO_3462 dedddfb280492441b5a193c9cb3f36aa 117 SUPERFAMILY SSF52833 6 117 2.21E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_3462 dedddfb280492441b5a193c9cb3f36aa 117 Gene3D G3DSA:3.40.30.10 4 117 1.3E-36 T 14-10-2018 TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 Gene3D G3DSA:3.50.50.60 313 483 9.2E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 Gene3D G3DSA:3.50.50.60 16 239 9.5E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 386 409 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 291 305 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 Gene3D G3DSA:1.10.150.570 590 642 1.4E-16 T 14-10-2018 TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 23 637 1.4E-227 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 SMART SM01228 567 638 1.2E-28 T 14-10-2018 TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 Pfam PF01134 Glucose inhibited division protein A 23 413 3.2E-158 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 166 1.6E-6 T 14-10-2018 TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 23 45 1.6E-6 T 14-10-2018 TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 20 645 39.109 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 Pfam PF13932 GidA associated domain 427 636 2.8E-60 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 TMO_3416 bc2b2faa90a1b7d6df6ddad2011663fa 649 SUPERFAMILY SSF51905 22 278 7.73E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3175 0e98cbb17e40830f32696799c06032eb 232 Pfam PF14279 HNH endonuclease 92 141 2.7E-18 T 14-10-2018 IPR029471 HNH endonuclease 5 TMO_3175 0e98cbb17e40830f32696799c06032eb 232 Gene3D G3DSA:3.30.40.60 74 165 4.3E-24 T 14-10-2018 TMO_3175 0e98cbb17e40830f32696799c06032eb 232 SMART SM00507 79 132 1.3E-11 T 14-10-2018 IPR003615 HNH nuclease TMO_2705 9e3161bc53e13dd9d8edc490c6de78d1 393 SUPERFAMILY SSF53187 6 380 4.65E-59 T 14-10-2018 TMO_2705 9e3161bc53e13dd9d8edc490c6de78d1 393 Pfam PF01546 Peptidase family M20/M25/M40 74 378 1.2E-37 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 TMO_2705 9e3161bc53e13dd9d8edc490c6de78d1 393 Pfam PF07687 Peptidase dimerisation domain 183 285 2.5E-17 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain TMO_2705 9e3161bc53e13dd9d8edc490c6de78d1 393 SUPERFAMILY SSF55031 187 295 2.69E-24 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TMO_2705 9e3161bc53e13dd9d8edc490c6de78d1 393 Gene3D G3DSA:3.40.630.10 9 369 2.3E-105 T 14-10-2018 TMO_2705 9e3161bc53e13dd9d8edc490c6de78d1 393 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 378 1.4E-118 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 TMO_2705 9e3161bc53e13dd9d8edc490c6de78d1 393 Gene3D G3DSA:3.30.70.360 187 300 2.3E-105 T 14-10-2018 TMO_2705 9e3161bc53e13dd9d8edc490c6de78d1 393 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 382 48.414 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 Pfam PF00270 DEAD/DEAH box helicase 24 173 4.0E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 SMART SM00487 13 195 1.4E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 Gene3D G3DSA:3.40.50.300 189 355 5.0E-48 T 14-10-2018 TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 Gene3D G3DSA:1.20.120.1080 382 480 2.3E-9 T 14-10-2018 TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 12 846 1.6E-293 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 127 136 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 PIRSF PIRSF005496 7 847 0.0 T 14-10-2018 TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 Pfam PF08482 ATP-dependent helicase C-terminal 702 833 1.2E-52 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 SMART SM00847 398 486 1.6E-13 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 SMART SM00490 240 338 5.4E-12 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 Pfam PF04408 Helicase associated domain (HA2) 399 469 1.1E-11 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 SUPERFAMILY SSF52540 21 348 6.91E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 Gene3D G3DSA:3.40.50.300 2 188 5.1E-56 T 14-10-2018 TMO_1361 8d3ae1fd4f8ad8a88f8008b894761ae8 847 Pfam PF00271 Helicase conserved C-terminal domain 219 337 1.8E-11 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_c0772 eef2a254c5a308a5754c2769dd23af8b 346 Pfam PF00753 Metallo-beta-lactamase superfamily 41 257 1.9E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_c0772 eef2a254c5a308a5754c2769dd23af8b 346 SUPERFAMILY SSF56281 3 342 7.18E-68 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_c0772 eef2a254c5a308a5754c2769dd23af8b 346 Gene3D G3DSA:3.60.15.10 21 285 1.9E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_c0772 eef2a254c5a308a5754c2769dd23af8b 346 SMART SM00849 40 257 3.6E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_a0571 5608b652e1a3873128e3426e443bc73a 284 SUPERFAMILY SSF54593 2 262 3.44E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_a0571 5608b652e1a3873128e3426e443bc73a 284 Pfam PF13468 Glyoxalase-like domain 6 186 1.2E-23 T 14-10-2018 IPR025870 Glyoxalase-like domain TMO_a0571 5608b652e1a3873128e3426e443bc73a 284 Gene3D G3DSA:3.10.180.10 2 121 9.9E-8 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 Gene3D G3DSA:3.40.50.300 77 353 2.3E-121 T 14-10-2018 TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 PIRSF PIRSF039072 1 474 7.6E-287 T 14-10-2018 TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 351 8.1E-64 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 Hamap MF_01347 ATP synthase subunit beta [atpB]. 3 469 58.64 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 SUPERFAMILY SSF52540 78 356 7.71E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 SMART SM00382 143 414 1.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 5 469 1.4E-257 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 SUPERFAMILY SSF47917 354 470 1.78E-54 T 14-10-2018 TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 Gene3D G3DSA:2.40.10.170 1 76 8.9E-33 T 14-10-2018 TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 SUPERFAMILY SSF50615 3 76 2.62E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 Gene3D G3DSA:1.10.1140.10 354 473 1.3E-59 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_2985 1fc2bb7f0ad67109731f42841466ed9a 474 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 74 2.7E-21 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_3469 fb19bc5a999bcd1d1c60b7a29d10125a 399 Pfam PF06969 HemN C-terminal domain 317 378 7.8E-13 T 14-10-2018 IPR010723 HemN, C-terminal TMO_3469 fb19bc5a999bcd1d1c60b7a29d10125a 399 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 10 347 1.3E-83 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 TMO_3469 fb19bc5a999bcd1d1c60b7a29d10125a 399 Pfam PF04055 Radical SAM superfamily 13 180 6.5E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_3469 fb19bc5a999bcd1d1c60b7a29d10125a 399 Gene3D G3DSA:3.80.30.20 1 304 1.1E-91 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TMO_3469 fb19bc5a999bcd1d1c60b7a29d10125a 399 SUPERFAMILY SSF102114 6 388 7.32E-106 T 14-10-2018 TMO_3469 fb19bc5a999bcd1d1c60b7a29d10125a 399 SMART SM00729 8 227 2.4E-50 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_2847 a0c3b788f1f959608419b357f03cb87f 532 PIRSF PIRSF002741 3 532 1.8E-137 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_2847 a0c3b788f1f959608419b357f03cb87f 532 SUPERFAMILY SSF53850 31 520 1.81E-133 T 14-10-2018 TMO_2847 a0c3b788f1f959608419b357f03cb87f 532 Gene3D G3DSA:3.10.105.10 286 497 1.0E-46 T 14-10-2018 TMO_2847 a0c3b788f1f959608419b357f03cb87f 532 Gene3D G3DSA:3.40.190.10 41 285 2.9E-72 T 14-10-2018 TMO_2847 a0c3b788f1f959608419b357f03cb87f 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 433 2.3E-91 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_0733 95c2db8f70a32e1c98f1fd69a619d353 162 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 138 1.1E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_0733 95c2db8f70a32e1c98f1fd69a619d353 162 SUPERFAMILY SSF54593 19 142 5.1E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_0733 95c2db8f70a32e1c98f1fd69a619d353 162 Gene3D G3DSA:3.10.180.10 19 153 4.1E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_1294 c0b17593e4a0deeec68700087a71222b 280 SUPERFAMILY SSF51569 4 264 1.76E-53 T 14-10-2018 TMO_1294 c0b17593e4a0deeec68700087a71222b 280 SMART SM01133 16 248 1.2E-6 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TMO_1294 c0b17593e4a0deeec68700087a71222b 280 Gene3D G3DSA:3.20.20.70 3 278 2.8E-57 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1294 c0b17593e4a0deeec68700087a71222b 280 PIRSF PIRSF038992 1 278 4.7E-64 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TMO_1294 c0b17593e4a0deeec68700087a71222b 280 Pfam PF01791 DeoC/LacD family aldolase 17 248 5.1E-39 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TMO_c0892 abaae44b01ed391cda96e6e6de938fa6 323 Pfam PF02779 Transketolase, pyrimidine binding domain 5 176 3.1E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_c0892 abaae44b01ed391cda96e6e6de938fa6 323 Pfam PF02780 Transketolase, C-terminal domain 192 314 1.0E-33 T 14-10-2018 IPR033248 Transketolase, C-terminal domain TMO_c0892 abaae44b01ed391cda96e6e6de938fa6 323 SUPERFAMILY SSF52518 2 202 8.34E-60 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_c0892 abaae44b01ed391cda96e6e6de938fa6 323 SUPERFAMILY SSF52922 188 321 1.57E-33 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_c0892 abaae44b01ed391cda96e6e6de938fa6 323 Gene3D G3DSA:3.40.50.920 191 322 1.2E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_c0892 abaae44b01ed391cda96e6e6de938fa6 323 SMART SM00861 4 178 2.2E-56 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_c0892 abaae44b01ed391cda96e6e6de938fa6 323 Gene3D G3DSA:3.40.50.970 2 190 2.8E-73 T 14-10-2018 TMO_c0859 0e550758a6ddff7906044af536639c10 209 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 101 204 1.8E-17 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 TMO_c0859 0e550758a6ddff7906044af536639c10 209 Gene3D G3DSA:2.60.120.620 8 209 3.3E-30 T 14-10-2018 TMO_c0859 0e550758a6ddff7906044af536639c10 209 SMART SM00702 13 205 2.7E-11 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 TMO_0471 4be5acd37de72334a61635ea48592b46 739 SUPERFAMILY SSF56003 24 250 5.93E-37 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TMO_0471 4be5acd37de72334a61635ea48592b46 739 SUPERFAMILY SSF56003 326 738 6.98E-107 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TMO_0471 4be5acd37de72334a61635ea48592b46 739 SMART SM01008 221 299 4.2E-12 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_0471 4be5acd37de72334a61635ea48592b46 739 PIRSF PIRSF036389 3 736 5.6E-236 T 14-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related TMO_0471 4be5acd37de72334a61635ea48592b46 739 Gene3D G3DSA:3.30.365.10 331 560 3.5E-58 T 14-10-2018 TMO_0471 4be5acd37de72334a61635ea48592b46 739 Gene3D G3DSA:3.30.365.10 355 447 3.5E-58 T 14-10-2018 TMO_0471 4be5acd37de72334a61635ea48592b46 739 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 325 562 4.4E-33 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_0471 4be5acd37de72334a61635ea48592b46 739 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 52 186 1.1E-10 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_0471 4be5acd37de72334a61635ea48592b46 739 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 601 681 4.4E-12 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_0471 4be5acd37de72334a61635ea48592b46 739 Gene3D G3DSA:3.30.365.10 585 739 1.3E-32 T 14-10-2018 TMO_0471 4be5acd37de72334a61635ea48592b46 739 Gene3D G3DSA:3.90.1170.50 191 273 2.3E-7 T 14-10-2018 TMO_0471 4be5acd37de72334a61635ea48592b46 739 Gene3D G3DSA:3.30.365.10 49 189 4.0E-21 T 14-10-2018 TMO_1980 d20962b942e7253382129a45a745ea67 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.2E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_1980 d20962b942e7253382129a45a745ea67 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.2E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_1980 d20962b942e7253382129a45a745ea67 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.2E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_1980 d20962b942e7253382129a45a745ea67 91 SMART SM00411 1 90 2.5E-41 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_1980 d20962b942e7253382129a45a745ea67 91 Gene3D G3DSA:4.10.520.10 1 91 9.1E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TMO_1980 d20962b942e7253382129a45a745ea67 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.2E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_1980 d20962b942e7253382129a45a745ea67 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 TMO_1980 d20962b942e7253382129a45a745ea67 91 SUPERFAMILY SSF47729 1 90 5.0E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TMO_c0473 548898749f186f8693f1c6b490f3bf3a 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 78 2.5E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0473 548898749f186f8693f1c6b490f3bf3a 466 SMART SM00345 21 78 3.9E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0473 548898749f186f8693f1c6b490f3bf3a 466 SUPERFAMILY SSF53383 102 459 3.3E-76 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0473 548898749f186f8693f1c6b490f3bf3a 466 Gene3D G3DSA:3.40.640.10 147 364 3.2E-80 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0473 548898749f186f8693f1c6b490f3bf3a 466 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 2.3E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0473 548898749f186f8693f1c6b490f3bf3a 466 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 2.3E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0473 548898749f186f8693f1c6b490f3bf3a 466 SUPERFAMILY SSF46785 6 82 1.16E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0473 548898749f186f8693f1c6b490f3bf3a 466 Pfam PF00155 Aminotransferase class I and II 113 454 2.2E-35 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_c0473 548898749f186f8693f1c6b490f3bf3a 466 Gene3D G3DSA:3.90.1150.10 108 454 3.2E-80 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0473 548898749f186f8693f1c6b490f3bf3a 466 Gene3D G3DSA:1.10.10.10 3 79 1.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0305 b3bb97635acac120df68319979c8cd04 338 Gene3D G3DSA:3.30.390.50 221 325 6.2E-23 T 14-10-2018 TMO_a0305 b3bb97635acac120df68319979c8cd04 338 SUPERFAMILY SSF55447 223 323 1.2E-23 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily TMO_a0305 b3bb97635acac120df68319979c8cd04 338 SMART SM01092 224 322 3.5E-23 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal TMO_a0305 b3bb97635acac120df68319979c8cd04 338 Gene3D G3DSA:3.30.465.10 8 219 1.2E-69 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TMO_a0305 b3bb97635acac120df68319979c8cd04 338 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 226 321 9.6E-16 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal TMO_a0305 b3bb97635acac120df68319979c8cd04 338 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 19 217 7.1E-37 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 TMO_a0305 b3bb97635acac120df68319979c8cd04 338 SUPERFAMILY SSF56176 15 217 7.09E-50 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_1713 4c95a2374fa8fd53af04aa2b68735847 318 TIGRFAM TIGR00510 lipA: lipoyl synthase 17 302 2.7E-115 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TMO_1713 4c95a2374fa8fd53af04aa2b68735847 318 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 18 58 2.4E-7 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TMO_1713 4c95a2374fa8fd53af04aa2b68735847 318 PIRSF PIRSF005963 2 317 1.9E-134 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TMO_1713 4c95a2374fa8fd53af04aa2b68735847 318 Pfam PF04055 Radical SAM superfamily 76 235 2.6E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_1713 4c95a2374fa8fd53af04aa2b68735847 318 SMART SM00729 69 277 1.3E-12 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_1713 4c95a2374fa8fd53af04aa2b68735847 318 Gene3D G3DSA:3.20.20.70 65 272 1.4E-20 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1713 4c95a2374fa8fd53af04aa2b68735847 318 Hamap MF_00206 Lipoyl synthase [lipA]. 1 307 150.949 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TMO_1713 4c95a2374fa8fd53af04aa2b68735847 318 SUPERFAMILY SSF102114 36 299 9.03E-63 T 14-10-2018 TMO_c0156 d4d77edfd696b2cb65eaa161b0be9e6f 313 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 202 226 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TMO_c0156 d4d77edfd696b2cb65eaa161b0be9e6f 313 Gene3D G3DSA:3.40.1500.10 18 313 5.3E-106 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TMO_c0156 d4d77edfd696b2cb65eaa161b0be9e6f 313 Pfam PF01218 Coproporphyrinogen III oxidase 34 312 5.3E-95 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TMO_c0156 d4d77edfd696b2cb65eaa161b0be9e6f 313 PRINTS PR00073 Coprogen oxidase signature 270 297 1.2E-45 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TMO_c0156 d4d77edfd696b2cb65eaa161b0be9e6f 313 PRINTS PR00073 Coprogen oxidase signature 298 313 1.2E-45 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TMO_c0156 d4d77edfd696b2cb65eaa161b0be9e6f 313 PRINTS PR00073 Coprogen oxidase signature 64 80 1.2E-45 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TMO_c0156 d4d77edfd696b2cb65eaa161b0be9e6f 313 PRINTS PR00073 Coprogen oxidase signature 198 227 1.2E-45 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TMO_c0156 d4d77edfd696b2cb65eaa161b0be9e6f 313 PRINTS PR00073 Coprogen oxidase signature 161 183 1.2E-45 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TMO_c0156 d4d77edfd696b2cb65eaa161b0be9e6f 313 PIRSF PIRSF000166 4 313 1.8E-110 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TMO_c0156 d4d77edfd696b2cb65eaa161b0be9e6f 313 SUPERFAMILY SSF102886 26 313 1.44E-112 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TMO_b0139 fc45bc323c5e92fc93bcab40a75d910f 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0139 fc45bc323c5e92fc93bcab40a75d910f 309 SUPERFAMILY SSF53850 88 297 3.26E-49 T 14-10-2018 TMO_b0139 fc45bc323c5e92fc93bcab40a75d910f 309 SUPERFAMILY SSF46785 4 88 2.63E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0139 fc45bc323c5e92fc93bcab40a75d910f 309 Gene3D G3DSA:3.40.190.10 93 290 2.5E-67 T 14-10-2018 TMO_b0139 fc45bc323c5e92fc93bcab40a75d910f 309 Gene3D G3DSA:1.10.10.10 2 92 5.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0139 fc45bc323c5e92fc93bcab40a75d910f 309 Pfam PF03466 LysR substrate binding domain 88 293 6.5E-47 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0139 fc45bc323c5e92fc93bcab40a75d910f 309 Gene3D G3DSA:3.40.190.10 163 264 2.5E-67 T 14-10-2018 TMO_1604 af73b8634638f4385659a9cef23f7498 772 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 14 770 7.4E-249 T 14-10-2018 TMO_1604 af73b8634638f4385659a9cef23f7498 772 Gene3D G3DSA:3.30.1360.40 262 358 8.2E-176 T 14-10-2018 TMO_1604 af73b8634638f4385659a9cef23f7498 772 SMART SM00434 17 488 3.9E-225 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_1604 af73b8634638f4385659a9cef23f7498 772 Gene3D G3DSA:2.120.10.90 532 729 7.6E-13 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TMO_1604 af73b8634638f4385659a9cef23f7498 772 Gene3D G3DSA:1.10.268.10 396 481 8.2E-176 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TMO_1604 af73b8634638f4385659a9cef23f7498 772 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 38 483 7.7E-134 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TMO_1604 af73b8634638f4385659a9cef23f7498 772 SUPERFAMILY SSF101904 529 769 1.83E-41 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TMO_1604 af73b8634638f4385659a9cef23f7498 772 SUPERFAMILY SSF56719 37 505 8.24E-148 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TMO_1604 af73b8634638f4385659a9cef23f7498 772 Gene3D G3DSA:3.90.199.10 38 505 8.2E-176 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 TMO_1604 af73b8634638f4385659a9cef23f7498 772 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 10 771 31.148 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_1065 d49e6abf051183086ea6471ab8fb8b96 603 Pfam PF00664 ABC transporter transmembrane region 39 294 3.1E-21 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_1065 d49e6abf051183086ea6471ab8fb8b96 603 SMART SM00382 376 562 4.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1065 d49e6abf051183086ea6471ab8fb8b96 603 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 18 578 2.7E-230 T 14-10-2018 IPR017750 ATPase, type I secretion system TMO_1065 d49e6abf051183086ea6471ab8fb8b96 603 SUPERFAMILY SSF52540 341 574 3.97E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1065 d49e6abf051183086ea6471ab8fb8b96 603 Gene3D G3DSA:1.20.1560.10 23 333 5.9E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_1065 d49e6abf051183086ea6471ab8fb8b96 603 Gene3D G3DSA:3.40.50.300 341 584 4.1E-75 T 14-10-2018 TMO_1065 d49e6abf051183086ea6471ab8fb8b96 603 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1065 d49e6abf051183086ea6471ab8fb8b96 603 SUPERFAMILY SSF90123 23 335 2.22E-46 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_1065 d49e6abf051183086ea6471ab8fb8b96 603 Pfam PF00005 ABC transporter 370 516 2.5E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0909 997b8e26257a6dae3925eb422933a310 323 SUPERFAMILY SSF51430 51 311 3.8E-47 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_c0909 997b8e26257a6dae3925eb422933a310 323 Pfam PF00248 Aldo/keto reductase family 64 309 1.1E-25 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_c0909 997b8e26257a6dae3925eb422933a310 323 Gene3D G3DSA:3.20.20.100 50 316 4.3E-40 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_2668 610f343d15d7597f0b1d186117b6854a 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.8E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2668 610f343d15d7597f0b1d186117b6854a 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.8E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2668 610f343d15d7597f0b1d186117b6854a 231 SUPERFAMILY SSF48498 87 190 6.81E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_2668 610f343d15d7597f0b1d186117b6854a 231 Gene3D G3DSA:1.10.357.10 2 209 2.0E-47 T 14-10-2018 TMO_2668 610f343d15d7597f0b1d186117b6854a 231 SUPERFAMILY SSF46689 3 79 1.18E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2668 610f343d15d7597f0b1d186117b6854a 231 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 87 186 1.6E-9 T 14-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 TMO_2668 610f343d15d7597f0b1d186117b6854a 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.4E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0921 09b64c1a5ed2393cd193a156bf82c2aa 502 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 36 482 9.7E-159 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 TMO_c0921 09b64c1a5ed2393cd193a156bf82c2aa 502 Pfam PF13746 4Fe-4S dicluster domain 218 321 1.8E-40 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_c0921 09b64c1a5ed2393cd193a156bf82c2aa 502 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 269 280 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_c0921 09b64c1a5ed2393cd193a156bf82c2aa 502 Pfam PF12801 4Fe-4S binding domain 95 136 3.0E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_c0921 09b64c1a5ed2393cd193a156bf82c2aa 502 SUPERFAMILY SSF54862 104 356 6.7E-27 T 14-10-2018 TMO_c0921 09b64c1a5ed2393cd193a156bf82c2aa 502 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 483 6.5E-26 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain TMO_c0921 09b64c1a5ed2393cd193a156bf82c2aa 502 Gene3D G3DSA:2.60.40.10 360 483 3.1E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold TMO_2449 e5a9916f49bab6a77cd39e0e0f4f0878 171 SUPERFAMILY SSF101738 3 114 4.71E-42 T 14-10-2018 IPR036760 SspB-like superfamily TMO_2449 e5a9916f49bab6a77cd39e0e0f4f0878 171 Pfam PF04386 Stringent starvation protein B 9 163 6.7E-48 T 14-10-2018 IPR007481 Stringent starvation protein B TMO_2449 e5a9916f49bab6a77cd39e0e0f4f0878 171 Gene3D G3DSA:2.30.30.220 1 117 3.1E-48 T 14-10-2018 IPR036760 SspB-like superfamily TMO_a0454 61d87907fb1899e29bbef7b0d3064a44 520 Gene3D G3DSA:3.90.226.10 2 247 6.3E-67 T 14-10-2018 TMO_a0454 61d87907fb1899e29bbef7b0d3064a44 520 SUPERFAMILY SSF52096 259 518 5.43E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0454 61d87907fb1899e29bbef7b0d3064a44 520 SUPERFAMILY SSF52096 16 248 5.33E-53 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0454 61d87907fb1899e29bbef7b0d3064a44 520 Pfam PF01039 Carboxyl transferase domain 29 509 2.0E-117 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 TMO_a0454 61d87907fb1899e29bbef7b0d3064a44 520 Gene3D G3DSA:3.90.226.10 255 520 1.3E-85 T 14-10-2018 TMO_1914 a4b760463de707819fae77b7f064df5f 97 Gene3D G3DSA:3.30.1050.10 2 97 5.8E-22 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily TMO_1914 a4b760463de707819fae77b7f064df5f 97 Pfam PF02036 SCP-2 sterol transfer family 5 97 4.9E-20 T 14-10-2018 IPR003033 SCP2 sterol-binding domain TMO_1914 a4b760463de707819fae77b7f064df5f 97 SUPERFAMILY SSF55718 9 97 3.53E-21 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily TMO_b0149 d7eb7793f930a9024dad09a69b1038ef 233 PIRSF PIRSF006232 1 231 6.6E-57 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 TMO_b0149 d7eb7793f930a9024dad09a69b1038ef 233 SUPERFAMILY SSF51182 4 231 2.58E-77 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_b0149 d7eb7793f930a9024dad09a69b1038ef 233 Gene3D G3DSA:2.60.120.10 8 231 1.3E-87 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_b0149 d7eb7793f930a9024dad09a69b1038ef 233 Gene3D G3DSA:2.60.120.10 12 136 1.3E-87 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_b0149 d7eb7793f930a9024dad09a69b1038ef 233 Pfam PF02678 Pirin 16 120 5.2E-36 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 TMO_0490 141657a588e104bde0075cf578880c40 444 SUPERFAMILY SSF53901 32 277 1.28E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0490 141657a588e104bde0075cf578880c40 444 Gene3D G3DSA:3.40.47.10 297 439 7.9E-33 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0490 141657a588e104bde0075cf578880c40 444 SMART SM00825 Beta-ketoacyl synthase 33 441 5.6E-10 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TMO_0490 141657a588e104bde0075cf578880c40 444 Gene3D G3DSA:3.40.47.10 22 283 9.3E-58 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0490 141657a588e104bde0075cf578880c40 444 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 186 202 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site TMO_0490 141657a588e104bde0075cf578880c40 444 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 285 394 3.3E-18 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TMO_0490 141657a588e104bde0075cf578880c40 444 SUPERFAMILY SSF53901 249 436 1.02E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0490 141657a588e104bde0075cf578880c40 444 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 32 275 1.4E-37 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TMO_c0665 919deca3b5ec96b96610017083091884 409 Pfam PF00266 Aminotransferase class-V 21 396 1.1E-80 T 14-10-2018 IPR000192 Aminotransferase class V domain TMO_c0665 919deca3b5ec96b96610017083091884 409 Gene3D G3DSA:3.40.640.10 32 280 3.5E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0665 919deca3b5ec96b96610017083091884 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site TMO_c0665 919deca3b5ec96b96610017083091884 409 Gene3D G3DSA:3.90.1150.10 21 403 3.5E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0665 919deca3b5ec96b96610017083091884 409 SUPERFAMILY SSF53383 20 405 8.61E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0665 919deca3b5ec96b96610017083091884 409 PIRSF PIRSF005572 18 409 2.9E-112 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TMO_b0313 2c7dae03bf88436dafa3ceb9b9afba91 509 Gene3D G3DSA:3.40.605.10 38 485 4.2E-133 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_b0313 2c7dae03bf88436dafa3ceb9b9afba91 509 Pfam PF00171 Aldehyde dehydrogenase family 37 488 1.2E-122 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_b0313 2c7dae03bf88436dafa3ceb9b9afba91 509 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_b0313 2c7dae03bf88436dafa3ceb9b9afba91 509 Gene3D G3DSA:3.40.309.10 268 460 4.2E-133 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_b0313 2c7dae03bf88436dafa3ceb9b9afba91 509 SUPERFAMILY SSF53720 30 497 1.7E-126 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_2511 0ac7d602854b2faa556dee8dc749048d 270 Pfam PF00005 ABC transporter 45 193 1.0E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2511 0ac7d602854b2faa556dee8dc749048d 270 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2511 0ac7d602854b2faa556dee8dc749048d 270 SUPERFAMILY SSF52540 29 263 1.33E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2511 0ac7d602854b2faa556dee8dc749048d 270 SMART SM00382 54 241 2.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2511 0ac7d602854b2faa556dee8dc749048d 270 PIRSF PIRSF039085 26 269 1.8E-107 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TMO_2511 0ac7d602854b2faa556dee8dc749048d 270 Gene3D G3DSA:3.40.50.300 26 270 3.8E-80 T 14-10-2018 TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 Gene3D G3DSA:1.10.8.60 315 394 1.2E-19 T 14-10-2018 TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 Pfam PF00072 Response regulator receiver domain 10 118 8.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 SUPERFAMILY SSF46689 436 482 2.33E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 SMART SM00382 163 306 5.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 SMART SM00448 8 118 8.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 Pfam PF02954 Bacterial regulatory protein, Fis family 442 482 1.8E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 SUPERFAMILY SSF52172 10 187 1.07E-37 T 14-10-2018 IPR011006 CheY-like superfamily TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 Pfam PF00158 Sigma-54 interaction domain 143 310 5.5E-64 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 SUPERFAMILY SSF52540 143 386 3.17E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 Gene3D G3DSA:3.40.50.2300 5 135 2.2E-28 T 14-10-2018 TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 Gene3D G3DSA:1.10.10.60 436 478 2.3E-12 T 14-10-2018 TMO_2518 9de0f3e9e176b14403e0a731f153f7f8 489 Gene3D G3DSA:3.40.50.300 136 314 7.2E-61 T 14-10-2018 TMO_3031 4644e9945556dd347630a192d554b394 288 SUPERFAMILY SSF46785 28 97 8.5E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3031 4644e9945556dd347630a192d554b394 288 Gene3D G3DSA:1.10.10.10 7 99 2.1E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 Gene3D G3DSA:3.40.50.720 8 263 5.4E-83 T 14-10-2018 TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 SUPERFAMILY SSF51735 13 253 3.14E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 251 6.5E-68 T 14-10-2018 TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 191 9.2E-5 T 14-10-2018 TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 4.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 4.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 4.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 4.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 4.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0236 49f546b119c038c4707f31ca08ca2cbd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0315 5ca13fe7c8dd890e87eeacf42cd43278 691 Pfam PF14518 Iron-containing redox enzyme 167 307 2.7E-8 T 14-10-2018 TMO_c0315 5ca13fe7c8dd890e87eeacf42cd43278 691 Gene3D G3DSA:1.20.910.10 102 323 1.0E-36 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_c0315 5ca13fe7c8dd890e87eeacf42cd43278 691 Gene3D G3DSA:1.20.910.10 450 667 5.7E-25 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_c0315 5ca13fe7c8dd890e87eeacf42cd43278 691 SUPERFAMILY SSF48613 135 313 1.22E-13 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_c0315 5ca13fe7c8dd890e87eeacf42cd43278 691 SUPERFAMILY SSF48613 464 617 1.37E-15 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_0291 1884c484673667de22951cbdcfe201f8 476 Gene3D G3DSA:3.30.590.10 142 474 1.6E-102 T 14-10-2018 TMO_0291 1884c484673667de22951cbdcfe201f8 476 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 275 290 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 TMO_0291 1884c484673667de22951cbdcfe201f8 476 Pfam PF00120 Glutamine synthetase, catalytic domain 141 470 4.9E-105 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_0291 1884c484673667de22951cbdcfe201f8 476 SMART SM01230 139 395 2.1E-112 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_0291 1884c484673667de22951cbdcfe201f8 476 SUPERFAMILY SSF54368 31 137 4.32E-17 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_0291 1884c484673667de22951cbdcfe201f8 476 SUPERFAMILY SSF55931 140 472 6.87E-108 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TMO_a0499 28c89c82cc2a535f88667695e9a41331 410 Gene3D G3DSA:3.40.50.2300 163 294 2.1E-71 T 14-10-2018 TMO_a0499 28c89c82cc2a535f88667695e9a41331 410 Pfam PF13458 Periplasmic binding protein 43 386 5.3E-52 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_a0499 28c89c82cc2a535f88667695e9a41331 410 SUPERFAMILY SSF53822 42 401 1.24E-61 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_a0499 28c89c82cc2a535f88667695e9a41331 410 Gene3D G3DSA:3.40.50.2300 51 363 2.1E-71 T 14-10-2018 TMO_c0764 3e1388635d7225fd591b46a6cf4c6999 190 SUPERFAMILY SSF47741 100 171 1.27E-17 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily TMO_c0764 3e1388635d7225fd591b46a6cf4c6999 190 Pfam PF01799 [2Fe-2S] binding domain 84 167 5.5E-17 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_c0764 3e1388635d7225fd591b46a6cf4c6999 190 SUPERFAMILY SSF54292 8 89 1.31E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_c0764 3e1388635d7225fd591b46a6cf4c6999 190 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 72 1.7E-7 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_c0764 3e1388635d7225fd591b46a6cf4c6999 190 Gene3D G3DSA:3.30.365.10 4 188 1.1E-44 T 14-10-2018 TMO_b0115 eb9205525fa994374b06e9dd598bf72f 275 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 267 1.6E-34 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 TMO_b0115 eb9205525fa994374b06e9dd598bf72f 275 SUPERFAMILY SSF53213 3 272 6.67E-69 T 14-10-2018 TMO_b0115 eb9205525fa994374b06e9dd598bf72f 275 Gene3D G3DSA:3.40.830.10 1 275 6.0E-72 T 14-10-2018 TMO_0327 a59ab7eeb01d39538ed507e94c78fd83 290 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 275 6.9E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_1982 930faccca7dfb18507db848c4542a2ae 422 SUPERFAMILY SSF52540 63 395 6.93E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1982 930faccca7dfb18507db848c4542a2ae 422 SMART SM00994 12 51 1.7E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TMO_1982 930faccca7dfb18507db848c4542a2ae 422 Gene3D G3DSA:3.30.50.30 2 51 5.1E-24 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily TMO_1982 930faccca7dfb18507db848c4542a2ae 422 Pfam PF06689 ClpX C4-type zinc finger 13 50 6.0E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TMO_1982 930faccca7dfb18507db848c4542a2ae 422 SUPERFAMILY SSF57716 13 48 1.18E-11 T 14-10-2018 TMO_1982 930faccca7dfb18507db848c4542a2ae 422 SMART SM00382 110 330 3.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1982 930faccca7dfb18507db848c4542a2ae 422 Gene3D G3DSA:3.40.50.300 57 312 1.8E-108 T 14-10-2018 TMO_1982 930faccca7dfb18507db848c4542a2ae 422 SMART SM01086 314 409 2.4E-35 T 14-10-2018 IPR019489 Clp ATPase, C-terminal TMO_1982 930faccca7dfb18507db848c4542a2ae 422 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 412 53.321 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TMO_1982 930faccca7dfb18507db848c4542a2ae 422 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 407 9.9E-199 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TMO_1982 930faccca7dfb18507db848c4542a2ae 422 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 308 1.8E-49 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_1982 930faccca7dfb18507db848c4542a2ae 422 Gene3D G3DSA:1.10.8.60 313 418 1.7E-39 T 14-10-2018 TMO_1982 930faccca7dfb18507db848c4542a2ae 422 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 314 385 1.0E-16 T 14-10-2018 IPR019489 Clp ATPase, C-terminal TMO_3384 c5bd500208a621d5c91cb8933ebb91b3 272 Pfam PF02754 Cysteine-rich domain 20 100 4.1E-14 T 14-10-2018 IPR004017 Cysteine-rich domain TMO_3384 c5bd500208a621d5c91cb8933ebb91b3 272 Pfam PF02754 Cysteine-rich domain 149 233 1.5E-11 T 14-10-2018 IPR004017 Cysteine-rich domain TMO_c0191 7c47c50d60de27cab56eeed162d7b167 510 PRINTS PR01607 Apyrase family signature 361 384 3.8E-11 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_c0191 7c47c50d60de27cab56eeed162d7b167 510 PRINTS PR01607 Apyrase family signature 196 213 3.8E-11 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_c0191 7c47c50d60de27cab56eeed162d7b167 510 PRINTS PR01607 Apyrase family signature 434 453 3.8E-11 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_c0191 7c47c50d60de27cab56eeed162d7b167 510 SUPERFAMILY SSF55816 301 499 1.7E-53 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_c0191 7c47c50d60de27cab56eeed162d7b167 510 Gene3D G3DSA:3.90.780.10 305 502 7.1E-54 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_c0191 7c47c50d60de27cab56eeed162d7b167 510 Pfam PF00149 Calcineurin-like phosphoesterase 33 229 2.6E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TMO_c0191 7c47c50d60de27cab56eeed162d7b167 510 SUPERFAMILY SSF56300 26 302 8.75E-58 T 14-10-2018 TMO_c0191 7c47c50d60de27cab56eeed162d7b167 510 Gene3D G3DSA:3.60.21.10 30 302 8.9E-53 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like TMO_c0191 7c47c50d60de27cab56eeed162d7b167 510 Pfam PF02872 5'-nucleotidase, C-terminal domain 305 460 1.9E-43 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TMO_0237 a2b2b0ab89817ad8649fd1aabd0b1199 215 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 2 204 4.8E-61 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_0237 a2b2b0ab89817ad8649fd1aabd0b1199 215 SUPERFAMILY SSF53955 35 208 1.24E-50 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_0237 a2b2b0ab89817ad8649fd1aabd0b1199 215 Pfam PF00912 Transglycosylase 42 198 7.1E-43 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_0237 a2b2b0ab89817ad8649fd1aabd0b1199 215 Gene3D G3DSA:1.10.3810.10 30 209 4.0E-45 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_0237 a2b2b0ab89817ad8649fd1aabd0b1199 215 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 1 207 37.543 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_2103 31ea9f72fea7a5b4b9411969d014bc9f 270 Gene3D G3DSA:3.40.1410.10 98 257 1.1E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_2103 31ea9f72fea7a5b4b9411969d014bc9f 270 Pfam PF07702 UTRA domain 111 249 3.9E-29 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_2103 31ea9f72fea7a5b4b9411969d014bc9f 270 SMART SM00345 30 89 2.3E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2103 31ea9f72fea7a5b4b9411969d014bc9f 270 SUPERFAMILY SSF64288 77 254 3.14E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_2103 31ea9f72fea7a5b4b9411969d014bc9f 270 SUPERFAMILY SSF46785 19 91 2.8E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2103 31ea9f72fea7a5b4b9411969d014bc9f 270 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 89 5.6E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2103 31ea9f72fea7a5b4b9411969d014bc9f 270 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 63 6.5E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2103 31ea9f72fea7a5b4b9411969d014bc9f 270 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 63 79 6.5E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2103 31ea9f72fea7a5b4b9411969d014bc9f 270 SMART SM00866 110 250 6.0E-25 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_2103 31ea9f72fea7a5b4b9411969d014bc9f 270 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 19 252 4.5E-76 T 14-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF TMO_2103 31ea9f72fea7a5b4b9411969d014bc9f 270 Gene3D G3DSA:1.10.10.10 14 90 2.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0516 c84aa569e51f4fc2d745019ba65232da 386 SUPERFAMILY SSF56645 5 243 1.15E-85 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_a0516 c84aa569e51f4fc2d745019ba65232da 386 Gene3D G3DSA:1.10.540.10 1 121 1.2E-38 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_a0516 c84aa569e51f4fc2d745019ba65232da 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 219 1.9E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_a0516 c84aa569e51f4fc2d745019ba65232da 386 Gene3D G3DSA:1.20.140.10 237 382 1.7E-40 T 14-10-2018 TMO_a0516 c84aa569e51f4fc2d745019ba65232da 386 Gene3D G3DSA:2.40.110.10 123 236 1.0E-42 T 14-10-2018 TMO_a0516 c84aa569e51f4fc2d745019ba65232da 386 SUPERFAMILY SSF47203 229 381 3.22E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_a0516 c84aa569e51f4fc2d745019ba65232da 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 120 1.1E-38 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_a0516 c84aa569e51f4fc2d745019ba65232da 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 379 8.2E-38 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_a0516 c84aa569e51f4fc2d745019ba65232da 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_c0546 225a8af9642fd7f22674bb01dfa42d78 312 Gene3D G3DSA:3.50.30.50 32 277 4.0E-54 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TMO_c0546 225a8af9642fd7f22674bb01dfa42d78 312 SUPERFAMILY SSF102198 41 275 3.66E-39 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TMO_c0546 225a8af9642fd7f22674bb01dfa42d78 312 Pfam PF04199 Putative cyclase 44 219 9.4E-28 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TMO_b0250 80a99b5ea7ef880e0b89593bae66d1fc 258 SUPERFAMILY SSF46785 16 90 3.83E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0250 80a99b5ea7ef880e0b89593bae66d1fc 258 Pfam PF01614 Bacterial transcriptional regulator 138 226 7.4E-5 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_b0250 80a99b5ea7ef880e0b89593bae66d1fc 258 SMART SM00346 16 106 2.0E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_b0250 80a99b5ea7ef880e0b89593bae66d1fc 258 Gene3D G3DSA:1.10.10.10 10 84 6.6E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0250 80a99b5ea7ef880e0b89593bae66d1fc 258 SUPERFAMILY SSF55781 83 247 3.27E-19 T 14-10-2018 TMO_b0250 80a99b5ea7ef880e0b89593bae66d1fc 258 Gene3D G3DSA:3.30.450.40 92 249 7.5E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_b0250 80a99b5ea7ef880e0b89593bae66d1fc 258 Pfam PF09339 IclR helix-turn-helix domain 18 68 1.7E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_b0312 ae8d0810e08fa2e7f69f426d34bc5769 416 SUPERFAMILY SSF53383 24 412 5.44E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_b0312 ae8d0810e08fa2e7f69f426d34bc5769 416 Gene3D G3DSA:3.90.1150.10 42 407 2.2E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_b0312 ae8d0810e08fa2e7f69f426d34bc5769 416 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 251 264 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TMO_b0312 ae8d0810e08fa2e7f69f426d34bc5769 416 Gene3D G3DSA:3.40.640.10 78 301 2.2E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_b0312 ae8d0810e08fa2e7f69f426d34bc5769 416 Pfam PF00155 Aminotransferase class I and II 47 407 2.4E-68 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_0551 7c7d5e2012d55a82db8b475315cfc36b 536 Gene3D G3DSA:3.30.300.310 428 532 6.8E-31 T 14-10-2018 TMO_0551 7c7d5e2012d55a82db8b475315cfc36b 536 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0551 7c7d5e2012d55a82db8b475315cfc36b 536 Gene3D G3DSA:3.40.50.12780 11 425 3.8E-97 T 14-10-2018 TMO_0551 7c7d5e2012d55a82db8b475315cfc36b 536 Pfam PF00501 AMP-binding enzyme 25 432 3.5E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0551 7c7d5e2012d55a82db8b475315cfc36b 536 Pfam PF13193 AMP-binding enzyme C-terminal domain 442 516 5.8E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0551 7c7d5e2012d55a82db8b475315cfc36b 536 SUPERFAMILY SSF56801 16 529 3.14E-137 T 14-10-2018 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 850 1.9E-259 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 Pfam PF08264 Anticodon-binding domain of tRNA 694 847 3.2E-19 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 Gene3D G3DSA:3.40.50.620 26 638 2.4E-233 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_2891 678e6acace08963316b7b3304a52e7b9 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 650 4.3E-197 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 234 257 1.6E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 570 579 1.6E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 410 425 1.6E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 1.6E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 536 549 1.6E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 SUPERFAMILY SSF50677 207 412 2.22E-51 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 Pfam PF06827 Zinc finger found in FPG and IleRS 905 933 1.1E-8 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 936 20.315 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 SUPERFAMILY SSF47323 661 936 1.0E-60 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 SUPERFAMILY SSF52374 4 656 3.47E-134 T 14-10-2018 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 Gene3D G3DSA:3.90.740.10 199 417 2.4E-233 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TMO_2891 678e6acace08963316b7b3304a52e7b9 938 Gene3D G3DSA:1.10.730.20 649 937 3.7E-80 T 14-10-2018 TMO_b0269 1fb37f922eb0e0bd0feaad8d29bedb89 310 Gene3D G3DSA:3.40.50.720 24 310 2.8E-98 T 14-10-2018 TMO_b0269 1fb37f922eb0e0bd0feaad8d29bedb89 310 SUPERFAMILY SSF52283 30 75 1.6E-7 T 14-10-2018 TMO_b0269 1fb37f922eb0e0bd0feaad8d29bedb89 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 127 275 1.5E-44 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_b0269 1fb37f922eb0e0bd0feaad8d29bedb89 310 SUPERFAMILY SSF51735 95 276 8.35E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0269 1fb37f922eb0e0bd0feaad8d29bedb89 310 Gene3D G3DSA:3.40.50.720 93 276 2.8E-98 T 14-10-2018 TMO_1012 18a961065ee3b3457c32df21b5fa3950 183 Gene3D G3DSA:1.10.287.500 91 140 1.1E-5 T 14-10-2018 TMO_1012 18a961065ee3b3457c32df21b5fa3950 183 Pfam PF04344 Chemotaxis phosphatase, CheZ 108 182 1.1E-8 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 TMO_1012 18a961065ee3b3457c32df21b5fa3950 183 SUPERFAMILY SSF75708 28 183 1.57E-30 T 14-10-2018 TMO_c0842 4ab70c6dd24fc9fb069cfe3249a7d2a8 251 Pfam PF02146 Sir2 family 27 198 4.0E-45 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 TMO_c0842 4ab70c6dd24fc9fb069cfe3249a7d2a8 251 Gene3D G3DSA:3.40.50.1220 22 241 5.4E-73 T 14-10-2018 TMO_c0842 4ab70c6dd24fc9fb069cfe3249a7d2a8 251 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 21 249 53.858 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 TMO_c0842 4ab70c6dd24fc9fb069cfe3249a7d2a8 251 Gene3D G3DSA:3.30.1600.10 36 170 5.4E-73 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily TMO_c0842 4ab70c6dd24fc9fb069cfe3249a7d2a8 251 SUPERFAMILY SSF52467 22 247 4.36E-68 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 SUPERFAMILY SSF55785 380 508 4.71E-19 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 SUPERFAMILY SSF47384 640 725 5.1E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 SUPERFAMILY SSF55874 714 880 7.73E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 Gene3D G3DSA:3.30.565.10 723 883 7.0E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 SUPERFAMILY SSF55785 507 634 7.68E-12 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00387 770 882 2.3E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00086 465 510 3.3 T 14-10-2018 IPR001610 PAC motif TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00086 596 636 36.0 T 14-10-2018 IPR001610 PAC motif TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 Gene3D G3DSA:1.10.287.130 632 722 5.6E-25 T 14-10-2018 TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00388 656 724 2.2E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 390 511 2.5E-15 T 14-10-2018 IPR000014 PAS domain TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 Pfam PF08447 PAS fold 418 489 2.3E-8 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 Pfam PF00512 His Kinase A (phospho-acceptor) domain 657 724 2.2E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00091 522 590 56.0 T 14-10-2018 IPR000014 PAS domain TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00091 392 458 1.6E-7 T 14-10-2018 IPR000014 PAS domain TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 Gene3D G3DSA:3.30.450.20 374 508 7.5E-19 T 14-10-2018 TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 Gene3D G3DSA:3.30.450.20 515 630 2.5E-17 T 14-10-2018 TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 771 881 2.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 808 822 2.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 866 879 2.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1094 e0a230d42d8d43f565886fae4cda8703 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 842 860 2.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2633 c4dca1a1e07416923c21793825eae995 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 5 102 3.2E-48 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2633 c4dca1a1e07416923c21793825eae995 103 SUPERFAMILY SSF54999 7 103 1.09E-40 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TMO_2633 c4dca1a1e07416923c21793825eae995 103 Pfam PF00338 Ribosomal protein S10p/S20e 8 102 6.2E-38 T 14-10-2018 IPR027486 Ribosomal protein S10 domain TMO_2633 c4dca1a1e07416923c21793825eae995 103 PRINTS PR00971 Ribosomal protein S10 family signature 6 19 8.6E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2633 c4dca1a1e07416923c21793825eae995 103 PRINTS PR00971 Ribosomal protein S10 family signature 62 76 8.6E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2633 c4dca1a1e07416923c21793825eae995 103 PRINTS PR00971 Ribosomal protein S10 family signature 41 56 8.6E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2633 c4dca1a1e07416923c21793825eae995 103 SMART SM01403 8 102 1.0E-60 T 14-10-2018 IPR027486 Ribosomal protein S10 domain TMO_2633 c4dca1a1e07416923c21793825eae995 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 4 103 28.085 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2633 c4dca1a1e07416923c21793825eae995 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 30 45 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2633 c4dca1a1e07416923c21793825eae995 103 Gene3D G3DSA:3.30.70.600 2 103 1.4E-40 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TMO_0403 30400006fe77e1a222695e40d10b645c 817 Pfam PF09397 Ftsk gamma domain 744 804 3.9E-23 T 14-10-2018 IPR018541 FtsK gamma domain TMO_0403 30400006fe77e1a222695e40d10b645c 817 SUPERFAMILY SSF52540 396 707 3.15E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0403 30400006fe77e1a222695e40d10b645c 817 Gene3D G3DSA:3.40.50.300 414 721 4.2E-115 T 14-10-2018 TMO_0403 30400006fe77e1a222695e40d10b645c 817 Pfam PF01580 FtsK/SpoIIIE family 417 636 5.0E-66 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TMO_0403 30400006fe77e1a222695e40d10b645c 817 Gene3D G3DSA:3.30.980.40 309 413 8.7E-27 T 14-10-2018 TMO_0403 30400006fe77e1a222695e40d10b645c 817 Gene3D G3DSA:1.10.10.10 739 803 1.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0403 30400006fe77e1a222695e40d10b645c 817 SMART SM00843 742 807 7.5E-31 T 14-10-2018 IPR018541 FtsK gamma domain TMO_0403 30400006fe77e1a222695e40d10b645c 817 SUPERFAMILY SSF46785 742 808 1.01E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0059 37ea24d36b63456947a4917fee0f191d 373 Gene3D G3DSA:3.20.20.120 117 373 1.3E-73 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TMO_b0059 37ea24d36b63456947a4917fee0f191d 373 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 29 125 4.8E-18 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain TMO_b0059 37ea24d36b63456947a4917fee0f191d 373 Gene3D G3DSA:3.30.390.10 1 115 1.3E-27 T 14-10-2018 IPR029017 Enolase-like, N-terminal TMO_b0059 37ea24d36b63456947a4917fee0f191d 373 Pfam PF13378 Enolase C-terminal domain-like 152 361 2.1E-47 T 14-10-2018 IPR029065 Enolase C-terminal domain-like TMO_b0059 37ea24d36b63456947a4917fee0f191d 373 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 190 221 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 TMO_b0059 37ea24d36b63456947a4917fee0f191d 373 SUPERFAMILY SSF51604 113 364 1.03E-63 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TMO_b0059 37ea24d36b63456947a4917fee0f191d 373 SUPERFAMILY SSF54826 3 126 3.7E-23 T 14-10-2018 TMO_b0059 37ea24d36b63456947a4917fee0f191d 373 SMART SM00922 144 240 7.5E-19 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal TMO_c0447 9049c9dd5a55f022bfb4f980c8fd0daa 309 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 14 186 3.1E-37 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_c0447 9049c9dd5a55f022bfb4f980c8fd0daa 309 SMART SM00833 222 308 2.1E-6 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_c0447 9049c9dd5a55f022bfb4f980c8fd0daa 309 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 225 302 4.8E-12 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_c0447 9049c9dd5a55f022bfb4f980c8fd0daa 309 Gene3D G3DSA:3.40.50.300 11 203 4.1E-49 T 14-10-2018 TMO_c0447 9049c9dd5a55f022bfb4f980c8fd0daa 309 SUPERFAMILY SSF52540 13 187 1.05E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0447 9049c9dd5a55f022bfb4f980c8fd0daa 309 SUPERFAMILY SSF90002 224 303 4.71E-9 T 14-10-2018 TMO_0175 ef3e1bd3c961d0002db7a00591b6ada1 154 Gene3D G3DSA:3.40.930.10 1 152 1.3E-51 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TMO_0175 ef3e1bd3c961d0002db7a00591b6ada1 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 7.8E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain TMO_0175 ef3e1bd3c961d0002db7a00591b6ada1 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain TMO_0175 ef3e1bd3c961d0002db7a00591b6ada1 154 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 147 3.4E-48 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 TMO_0175 ef3e1bd3c961d0002db7a00591b6ada1 154 SUPERFAMILY SSF55804 1 147 1.31E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TMO_3219 4aeff09bb4e1a880d58fbaa411aa1daa 455 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 15 451 31.943 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TMO_3219 4aeff09bb4e1a880d58fbaa411aa1daa 455 SUPERFAMILY SSF55205 15 450 1.18E-121 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TMO_3219 4aeff09bb4e1a880d58fbaa411aa1daa 455 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 19 449 2.8E-118 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TMO_3219 4aeff09bb4e1a880d58fbaa411aa1daa 455 PIRSF PIRSF000505 1 454 2.8E-115 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TMO_3219 4aeff09bb4e1a880d58fbaa411aa1daa 455 ProSitePatterns PS00104 EPSP synthase signature 1. 102 116 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TMO_3219 4aeff09bb4e1a880d58fbaa411aa1daa 455 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 16 442 5.7E-102 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 TMO_3219 4aeff09bb4e1a880d58fbaa411aa1daa 455 Gene3D G3DSA:3.65.10.10 27 249 6.0E-145 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TMO_3219 4aeff09bb4e1a880d58fbaa411aa1daa 455 ProSitePatterns PS00885 EPSP synthase signature 2. 359 377 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TMO_3219 4aeff09bb4e1a880d58fbaa411aa1daa 455 Gene3D G3DSA:3.65.10.10 17 444 6.0E-145 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TMO_1168 263e97ed664c8f6ad79320edc69dc0c0 285 SUPERFAMILY SSF53335 16 237 6.04E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1168 263e97ed664c8f6ad79320edc69dc0c0 285 Pfam PF13649 Methyltransferase domain 55 152 6.2E-17 T 14-10-2018 TMO_1168 263e97ed664c8f6ad79320edc69dc0c0 285 Gene3D G3DSA:3.40.50.150 6 277 1.5E-36 T 14-10-2018 TMO_0288 257cd3caf0b71f2413f786cdd59e39ac 312 SUPERFAMILY SSF161098 26 309 3.46E-59 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0288 257cd3caf0b71f2413f786cdd59e39ac 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 306 2.2E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0288 257cd3caf0b71f2413f786cdd59e39ac 312 Gene3D G3DSA:1.10.3720.10 24 309 3.7E-59 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2108 8b588450bace29efc8938108c4dfdf23 159 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 1.3E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TMO_2108 8b588450bace29efc8938108c4dfdf23 159 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.3E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TMO_2108 8b588450bace29efc8938108c4dfdf23 159 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 117 1.3E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TMO_2108 8b588450bace29efc8938108c4dfdf23 159 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 13 152 2.3E-45 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TMO_2108 8b588450bace29efc8938108c4dfdf23 159 Gene3D G3DSA:2.40.100.10 2 158 6.4E-47 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily TMO_2108 8b588450bace29efc8938108c4dfdf23 159 PIRSF PIRSF001467 4 158 5.1E-32 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 TMO_2108 8b588450bace29efc8938108c4dfdf23 159 SUPERFAMILY SSF50891 7 154 3.07E-47 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily TMO_c0490 86d048edc271b70e16398e99e69562d4 397 Pfam PF04820 Tryptophan halogenase 118 336 9.2E-7 T 14-10-2018 IPR006905 Flavin-dependent halogenase TMO_c0490 86d048edc271b70e16398e99e69562d4 397 Gene3D G3DSA:3.30.9.100 64 300 1.2E-62 T 14-10-2018 TMO_c0490 86d048edc271b70e16398e99e69562d4 397 SUPERFAMILY SSF51905 24 387 6.85E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0490 86d048edc271b70e16398e99e69562d4 397 Gene3D G3DSA:3.50.50.60 25 391 1.2E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0490 86d048edc271b70e16398e99e69562d4 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 25 47 6.6E-10 T 14-10-2018 TMO_c0490 86d048edc271b70e16398e99e69562d4 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 309 324 6.6E-10 T 14-10-2018 TMO_c0490 86d048edc271b70e16398e99e69562d4 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 177 192 6.6E-10 T 14-10-2018 TMO_1503 4bdf4eb393489e5b7b8af53e81aa8633 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 132 2.1E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_1503 4bdf4eb393489e5b7b8af53e81aa8633 327 SUPERFAMILY SSF51735 137 295 2.39E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1503 4bdf4eb393489e5b7b8af53e81aa8633 327 Gene3D G3DSA:3.40.50.720 147 276 7.8E-82 T 14-10-2018 TMO_1503 4bdf4eb393489e5b7b8af53e81aa8633 327 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 TMO_1503 4bdf4eb393489e5b7b8af53e81aa8633 327 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 12 326 2.3E-102 T 14-10-2018 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 TMO_1503 4bdf4eb393489e5b7b8af53e81aa8633 327 SUPERFAMILY SSF50129 1 180 3.8E-48 T 14-10-2018 IPR011032 GroES-like superfamily TMO_1503 4bdf4eb393489e5b7b8af53e81aa8633 327 Gene3D G3DSA:3.90.180.10 5 318 7.8E-82 T 14-10-2018 TMO_c0730 e013e1f9f01e913189db6563a0eb147f 331 Hamap MF_00443 Thiazole synthase [thiG]. 79 331 43.278 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 TMO_c0730 e013e1f9f01e913189db6563a0eb147f 331 Gene3D G3DSA:3.20.20.70 71 331 7.2E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_c0730 e013e1f9f01e913189db6563a0eb147f 331 Pfam PF05690 Thiazole biosynthesis protein ThiG 82 326 1.1E-112 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 TMO_c0730 e013e1f9f01e913189db6563a0eb147f 331 SUPERFAMILY SSF110399 78 318 1.11E-90 T 14-10-2018 TMO_c0730 e013e1f9f01e913189db6563a0eb147f 331 SUPERFAMILY SSF54285 3 65 6.05E-16 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp TMO_c0730 e013e1f9f01e913189db6563a0eb147f 331 Gene3D G3DSA:3.10.20.30 1 70 4.5E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_c0730 e013e1f9f01e913189db6563a0eb147f 331 Pfam PF02597 ThiS family 5 66 1.8E-13 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 TMO_c0730 e013e1f9f01e913189db6563a0eb147f 331 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 4.7E-21 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis TMO_c0173 af40394e0a6c9fbedec8ba9dc22ee06f 458 SUPERFAMILY SSF53300 47 221 1.48E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TMO_c0173 af40394e0a6c9fbedec8ba9dc22ee06f 458 SMART SM00327 43 228 9.8E-12 T 14-10-2018 IPR002035 von Willebrand factor, type A TMO_c0173 af40394e0a6c9fbedec8ba9dc22ee06f 458 Pfam PF13519 von Willebrand factor type A domain 46 157 4.0E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A TMO_c0173 af40394e0a6c9fbedec8ba9dc22ee06f 458 Gene3D G3DSA:3.40.50.410 43 226 1.3E-29 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TMO_3000 08795d842337f298349170cfb5ab6baa 107 Gene3D G3DSA:1.10.238.10 30 106 1.3E-12 T 14-10-2018 TMO_3000 08795d842337f298349170cfb5ab6baa 107 ProSitePatterns PS00018 EF-hand calcium-binding domain. 89 101 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site TMO_3000 08795d842337f298349170cfb5ab6baa 107 Pfam PF13499 EF-hand domain pair 34 100 1.1E-7 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 TMO_3000 08795d842337f298349170cfb5ab6baa 107 ProSitePatterns PS00018 EF-hand calcium-binding domain. 38 50 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site TMO_3000 08795d842337f298349170cfb5ab6baa 107 SUPERFAMILY SSF47473 33 101 5.42E-9 T 14-10-2018 IPR011992 EF-hand domain pair TMO_1172 353345ac0600400dd3636defe970a5f1 419 PIRSF PIRSF010256 3 393 1.1E-117 T 14-10-2018 IPR011195 Uncharacterised conserved protein UCP010256 TMO_1172 353345ac0600400dd3636defe970a5f1 419 SUPERFAMILY SSF53300 220 356 9.85E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TMO_1172 353345ac0600400dd3636defe970a5f1 419 Gene3D G3DSA:3.40.50.410 216 353 4.5E-11 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TMO_1172 353345ac0600400dd3636defe970a5f1 419 SMART SM00327 218 385 4.3E-4 T 14-10-2018 IPR002035 von Willebrand factor, type A TMO_1172 353345ac0600400dd3636defe970a5f1 419 Pfam PF05762 VWA domain containing CoxE-like protein 163 382 2.0E-70 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like TMO_1811 facd53e5ef6b0349a4f109ca236b9034 354 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 342 137.758 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 TMO_1811 facd53e5ef6b0349a4f109ca236b9034 354 Gene3D G3DSA:3.40.718.10 6 351 3.1E-120 T 14-10-2018 TMO_1811 facd53e5ef6b0349a4f109ca236b9034 354 PIRSF PIRSF002465 5 341 2.1E-119 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 TMO_1811 facd53e5ef6b0349a4f109ca236b9034 354 Pfam PF02504 Fatty acid synthesis protein 7 329 1.3E-103 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 TMO_1811 facd53e5ef6b0349a4f109ca236b9034 354 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 8 337 8.5E-97 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 TMO_1811 facd53e5ef6b0349a4f109ca236b9034 354 SUPERFAMILY SSF53659 7 337 1.69E-102 T 14-10-2018 TMO_a0051 8aecc95ac122993cd9ec50aecd5c6eda 376 Pfam PF02515 CoA-transferase family III 4 352 2.2E-87 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_a0051 8aecc95ac122993cd9ec50aecd5c6eda 376 Gene3D G3DSA:3.30.1540.10 214 302 2.7E-122 T 14-10-2018 TMO_a0051 8aecc95ac122993cd9ec50aecd5c6eda 376 Gene3D G3DSA:3.40.50.10540 3 320 2.7E-122 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_a0051 8aecc95ac122993cd9ec50aecd5c6eda 376 SUPERFAMILY SSF89796 1 375 9.03E-126 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_0709 d134e70e5a986ffa2d5cac89409fc164 328 PRINTS PR01713 Nucleotide sugar epimerase signature 249 264 4.1E-27 T 14-10-2018 TMO_0709 d134e70e5a986ffa2d5cac89409fc164 328 PRINTS PR01713 Nucleotide sugar epimerase signature 288 305 4.1E-27 T 14-10-2018 TMO_0709 d134e70e5a986ffa2d5cac89409fc164 328 PRINTS PR01713 Nucleotide sugar epimerase signature 218 233 4.1E-27 T 14-10-2018 TMO_0709 d134e70e5a986ffa2d5cac89409fc164 328 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 4.1E-27 T 14-10-2018 TMO_0709 d134e70e5a986ffa2d5cac89409fc164 328 SUPERFAMILY SSF51735 1 325 1.21E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0709 d134e70e5a986ffa2d5cac89409fc164 328 Gene3D G3DSA:3.90.25.10 182 321 5.1E-94 T 14-10-2018 TMO_0709 d134e70e5a986ffa2d5cac89409fc164 328 Gene3D G3DSA:3.40.50.720 4 309 5.1E-94 T 14-10-2018 TMO_0709 d134e70e5a986ffa2d5cac89409fc164 328 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 317 2.6E-51 T 14-10-2018 IPR016040 NAD(P)-binding domain TMO_0295 0822fac56aa26c462f4d7227a4517a17 318 SUPERFAMILY SSF161098 91 313 7.46E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0295 0822fac56aa26c462f4d7227a4517a17 318 Gene3D G3DSA:1.10.3720.10 84 306 5.2E-26 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0295 0822fac56aa26c462f4d7227a4517a17 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 313 1.0E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0751 a4a0267a686f112b18e91bacb7350648 287 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 274 6.4E-46 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0751 a4a0267a686f112b18e91bacb7350648 287 SUPERFAMILY SSF81345 49 207 6.28E-5 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1644 3e69278a99a061a47e8ecc9a9b21bbdd 279 SUPERFAMILY SSF52540 7 255 7.1E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1644 3e69278a99a061a47e8ecc9a9b21bbdd 279 SMART SM00382 32 233 2.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1644 3e69278a99a061a47e8ecc9a9b21bbdd 279 Pfam PF00005 ABC transporter 24 183 1.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1644 3e69278a99a061a47e8ecc9a9b21bbdd 279 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 255 3.8E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_1644 3e69278a99a061a47e8ecc9a9b21bbdd 279 Gene3D G3DSA:3.40.50.300 2 259 8.2E-58 T 14-10-2018 TMO_c0620 1ef9d635f5de2bf3e720b3e846f52144 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 5.7E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0620 1ef9d635f5de2bf3e720b3e846f52144 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 5.7E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0620 1ef9d635f5de2bf3e720b3e846f52144 255 Gene3D G3DSA:1.10.10.10 7 81 1.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0620 1ef9d635f5de2bf3e720b3e846f52144 255 SUPERFAMILY SSF46785 7 79 7.88E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0620 1ef9d635f5de2bf3e720b3e846f52144 255 SMART SM00895 95 223 2.1E-18 T 14-10-2018 IPR011711 GntR, C-terminal TMO_c0620 1ef9d635f5de2bf3e720b3e846f52144 255 Gene3D G3DSA:1.20.120.530 91 233 3.5E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_c0620 1ef9d635f5de2bf3e720b3e846f52144 255 SUPERFAMILY SSF48008 92 228 6.8E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_c0620 1ef9d635f5de2bf3e720b3e846f52144 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 8.0E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0620 1ef9d635f5de2bf3e720b3e846f52144 255 SMART SM00345 16 75 4.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0620 1ef9d635f5de2bf3e720b3e846f52144 255 Pfam PF07729 FCD domain 95 221 5.0E-23 T 14-10-2018 IPR011711 GntR, C-terminal TMO_2370 bc6f46d02faa63b6aa7786e8850f7621 1388 SUPERFAMILY SSF51445 476 790 3.86E-15 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_2370 bc6f46d02faa63b6aa7786e8850f7621 1388 Gene3D G3DSA:3.20.20.80 525 796 1.2E-13 T 14-10-2018 TMO_c0419 b4c0a21b68c94bf369ffba73e231dba8 297 SUPERFAMILY SSF53850 90 292 8.84E-47 T 14-10-2018 TMO_c0419 b4c0a21b68c94bf369ffba73e231dba8 297 Gene3D G3DSA:1.10.10.10 3 85 9.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0419 b4c0a21b68c94bf369ffba73e231dba8 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 7.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0419 b4c0a21b68c94bf369ffba73e231dba8 297 Gene3D G3DSA:3.40.190.10 162 264 1.5E-63 T 14-10-2018 TMO_c0419 b4c0a21b68c94bf369ffba73e231dba8 297 Pfam PF03466 LysR substrate binding domain 88 292 2.1E-48 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0419 b4c0a21b68c94bf369ffba73e231dba8 297 Gene3D G3DSA:3.40.190.10 91 289 1.5E-63 T 14-10-2018 TMO_c0419 b4c0a21b68c94bf369ffba73e231dba8 297 SUPERFAMILY SSF46785 4 85 6.19E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2019 91a1e3de59e470446d89bd1dc100fd29 396 Gene3D G3DSA:3.40.50.2000 19 172 8.0E-45 T 14-10-2018 TMO_2019 91a1e3de59e470446d89bd1dc100fd29 396 Pfam PF00534 Glycosyl transferases group 1 236 357 1.9E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 TMO_2019 91a1e3de59e470446d89bd1dc100fd29 396 Gene3D G3DSA:3.40.50.2000 173 362 8.0E-45 T 14-10-2018 TMO_2019 91a1e3de59e470446d89bd1dc100fd29 396 SUPERFAMILY SSF53756 2 376 5.5E-47 T 14-10-2018 TMO_2404 80f310b90cf5938a2192813a4811ba96 705 SUPERFAMILY SSF50610 480 542 1.06E-12 T 14-10-2018 IPR009004 Transposase, Mu, C-terminal TMO_2404 80f310b90cf5938a2192813a4811ba96 705 SUPERFAMILY SSF53098 254 470 2.73E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_2404 80f310b90cf5938a2192813a4811ba96 705 Gene3D G3DSA:3.30.420.10 243 472 1.0E-40 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_2404 80f310b90cf5938a2192813a4811ba96 705 Gene3D G3DSA:1.10.10.10 1 55 3.6E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2404 80f310b90cf5938a2192813a4811ba96 705 Pfam PF09299 Mu transposase, C-terminal 481 539 2.1E-11 T 14-10-2018 IPR015378 Transposase-like, Mu, C-terminal TMO_2404 80f310b90cf5938a2192813a4811ba96 705 Pfam PF00665 Integrase core domain 252 374 7.3E-9 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TMO_0102 48769a2fc13b1a0b9540f402b9821f52 241 PIRSF PIRSF001461 14 238 1.4E-92 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TMO_0102 48769a2fc13b1a0b9540f402b9821f52 241 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 47 61 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TMO_0102 48769a2fc13b1a0b9540f402b9821f52 241 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 149 171 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TMO_0102 48769a2fc13b1a0b9540f402b9821f52 241 Pfam PF00834 Ribulose-phosphate 3 epimerase family 20 216 2.1E-83 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TMO_0102 48769a2fc13b1a0b9540f402b9821f52 241 SUPERFAMILY SSF51366 17 231 6.48E-75 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TMO_0102 48769a2fc13b1a0b9540f402b9821f52 241 Gene3D G3DSA:3.20.20.70 9 230 8.3E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_0102 48769a2fc13b1a0b9540f402b9821f52 241 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 20 230 6.2E-89 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TMO_1429 bc5ea9becdd3e6c98eb07272d3ffbab8 772 Pfam PF02538 Hydantoinase B/oxoprolinase 48 627 2.7E-122 T 14-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_0705 1ab82f02024f4508ae4c3bd8bb33b1bf 348 SUPERFAMILY SSF53850 39 344 9.06E-90 T 14-10-2018 TMO_0705 1ab82f02024f4508ae4c3bd8bb33b1bf 348 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 37 344 1.3E-150 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 TMO_0705 1ab82f02024f4508ae4c3bd8bb33b1bf 348 Gene3D G3DSA:3.40.190.10 45 313 1.0E-136 T 14-10-2018 TMO_0705 1ab82f02024f4508ae4c3bd8bb33b1bf 348 Gene3D G3DSA:3.40.190.10 133 343 1.0E-136 T 14-10-2018 TMO_0705 1ab82f02024f4508ae4c3bd8bb33b1bf 348 Pfam PF13531 Bacterial extracellular solute-binding protein 55 298 2.8E-45 T 14-10-2018 TMO_0705 1ab82f02024f4508ae4c3bd8bb33b1bf 348 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 164 172 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 305 530 1.0E-32 T 14-10-2018 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 Gene3D G3DSA:3.40.50.1000 487 564 1.0E-22 T 14-10-2018 IPR023214 HAD superfamily TMO_0449 67ae9dc23a0c39867aaae44240951506 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 6 676 3.9E-295 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 ProSitePatterns PS01229 Hypothetical cof family signature 2. 516 538 - T 14-10-2018 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 9 680 39.744 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 Gene3D G3DSA:3.40.1110.10 320 451 1.2E-41 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 SUPERFAMILY SSF81653 121 211 1.57E-21 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 311 317 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 SUPERFAMILY SSF56784 297 559 9.74E-41 T 14-10-2018 IPR036412 HAD-like superfamily TMO_0449 67ae9dc23a0c39867aaae44240951506 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 369 602 1.4E-45 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 326 2.7E-29 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 Gene3D G3DSA:2.70.150.20 114 215 4.2E-26 T 14-10-2018 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 Pfam PF00122 E1-E2 ATPase 120 288 4.8E-32 T 14-10-2018 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 9.0E-24 T 14-10-2018 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 158 172 9.0E-24 T 14-10-2018 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 9.0E-24 T 14-10-2018 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 309 323 9.0E-24 T 14-10-2018 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 9.0E-24 T 14-10-2018 TMO_0449 67ae9dc23a0c39867aaae44240951506 682 SUPERFAMILY SSF81665 45 363 4.45E-7 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TMO_1423 a4b62324166ee457e00c188278fc6265 339 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 329 4.4E-29 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 TMO_1423 a4b62324166ee457e00c188278fc6265 339 Gene3D G3DSA:3.40.630.10 14 330 4.3E-74 T 14-10-2018 TMO_1423 a4b62324166ee457e00c188278fc6265 339 PIRSF PIRSF039012 3 336 1.3E-63 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 TMO_1423 a4b62324166ee457e00c188278fc6265 339 SUPERFAMILY SSF53187 31 329 1.36E-33 T 14-10-2018 TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 327 2.7E-76 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 Gene3D G3DSA:3.30.470.130 1 452 3.7E-192 T 14-10-2018 TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 SMART SM00878 341 445 3.8E-43 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 Pfam PF00364 Biotin-requiring enzyme 592 657 9.2E-13 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 Gene3D G3DSA:2.40.50.100 582 658 2.0E-19 T 14-10-2018 TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 115 2.2E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 SUPERFAMILY SSF52440 5 118 1.65E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 158 172 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 SUPERFAMILY SSF51230 584 658 1.96E-18 T 14-10-2018 IPR011053 Single hybrid motif TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 SUPERFAMILY SSF51246 336 450 1.26E-32 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 SUPERFAMILY SSF56059 88 353 7.07E-70 T 14-10-2018 TMO_a0453 58d04e8382055f6d566bf5eca8d059f7 664 Pfam PF02785 Biotin carboxylase C-terminal domain 341 444 2.0E-29 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_1676 2a620bfdded36ff8fa5a9f5c0f00ee94 412 SUPERFAMILY SSF56601 31 294 5.05E-81 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_1676 2a620bfdded36ff8fa5a9f5c0f00ee94 412 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 294 383 3.9E-19 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TMO_1676 2a620bfdded36ff8fa5a9f5c0f00ee94 412 SUPERFAMILY SSF69189 294 386 8.24E-23 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TMO_1676 2a620bfdded36ff8fa5a9f5c0f00ee94 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 151 2.7E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_1676 2a620bfdded36ff8fa5a9f5c0f00ee94 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 81 92 2.7E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_1676 2a620bfdded36ff8fa5a9f5c0f00ee94 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 161 174 2.7E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_1676 2a620bfdded36ff8fa5a9f5c0f00ee94 412 Gene3D G3DSA:2.60.410.10 294 384 5.5E-22 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TMO_1676 2a620bfdded36ff8fa5a9f5c0f00ee94 412 Gene3D G3DSA:3.40.710.10 36 293 8.0E-84 T 14-10-2018 TMO_1676 2a620bfdded36ff8fa5a9f5c0f00ee94 412 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 46 270 4.4E-71 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 TMO_1676 2a620bfdded36ff8fa5a9f5c0f00ee94 412 SMART SM00936 294 384 7.3E-31 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TMO_1307 f647aa44716399e7c481cfceac4a5939 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 8.6E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1307 f647aa44716399e7c481cfceac4a5939 218 SUPERFAMILY SSF48498 96 205 1.17E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1307 f647aa44716399e7c481cfceac4a5939 218 Gene3D G3DSA:1.10.357.10 20 209 2.3E-48 T 14-10-2018 TMO_1307 f647aa44716399e7c481cfceac4a5939 218 SUPERFAMILY SSF46689 25 98 6.16E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1307 f647aa44716399e7c481cfceac4a5939 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 2.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1307 f647aa44716399e7c481cfceac4a5939 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 2.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_3394 bc3201a7bf6962fdba244ffb2c628233 227 SUPERFAMILY SSF54427 82 223 6.68E-44 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_3394 bc3201a7bf6962fdba244ffb2c628233 227 SMART SM00978 80 225 3.3E-46 T 14-10-2018 IPR007379 Tim44-like domain TMO_3394 bc3201a7bf6962fdba244ffb2c628233 227 Pfam PF04280 Tim44-like domain 83 223 1.7E-42 T 14-10-2018 IPR007379 Tim44-like domain TMO_3394 bc3201a7bf6962fdba244ffb2c628233 227 ProDom PD111165 RP434 80 221 1.0E-6 T 14-10-2018 TMO_3394 bc3201a7bf6962fdba244ffb2c628233 227 Gene3D G3DSA:3.10.450.240 69 227 3.3E-35 T 14-10-2018 TMO_3394 bc3201a7bf6962fdba244ffb2c628233 227 PIRSF PIRSF031890 1 227 1.5E-63 T 14-10-2018 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related TMO_a0498 0f6ef42bacab889880e4b2ab1a2dbdf4 263 Pfam PF00005 ABC transporter 28 187 1.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0498 0f6ef42bacab889880e4b2ab1a2dbdf4 263 SUPERFAMILY SSF52540 11 259 4.8E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0498 0f6ef42bacab889880e4b2ab1a2dbdf4 263 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 237 259 1.1E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_a0498 0f6ef42bacab889880e4b2ab1a2dbdf4 263 Gene3D G3DSA:3.40.50.300 7 261 4.5E-58 T 14-10-2018 TMO_a0498 0f6ef42bacab889880e4b2ab1a2dbdf4 263 SMART SM00382 36 237 1.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1994 c378419763543f429e7a5614429d7db2 310 Pfam PF00892 EamA-like transporter family 27 158 4.2E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1994 c378419763543f429e7a5614429d7db2 310 Pfam PF00892 EamA-like transporter family 175 300 6.5E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1994 c378419763543f429e7a5614429d7db2 310 SUPERFAMILY SSF103481 208 307 2.35E-13 T 14-10-2018 TMO_1994 c378419763543f429e7a5614429d7db2 310 SUPERFAMILY SSF103481 66 162 1.96E-11 T 14-10-2018 TMO_0921 eb39ba223925b28082d6743f54c36fc1 427 SUPERFAMILY SSF52540 1 425 4.89E-168 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0921 eb39ba223925b28082d6743f54c36fc1 427 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 2 425 2.0E-154 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TMO_0921 eb39ba223925b28082d6743f54c36fc1 427 SMART SM00788 1 420 5.3E-278 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TMO_0921 eb39ba223925b28082d6743f54c36fc1 427 Gene3D G3DSA:3.90.170.10 263 427 9.9E-67 T 14-10-2018 TMO_0921 eb39ba223925b28082d6743f54c36fc1 427 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 129 140 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TMO_0921 eb39ba223925b28082d6743f54c36fc1 427 Pfam PF00709 Adenylosuccinate synthetase 1 419 5.9E-171 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TMO_0921 eb39ba223925b28082d6743f54c36fc1 427 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 427 205.095 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TMO_0921 eb39ba223925b28082d6743f54c36fc1 427 Gene3D G3DSA:3.40.440.10 3 251 4.2E-93 T 14-10-2018 TMO_0921 eb39ba223925b28082d6743f54c36fc1 427 Gene3D G3DSA:1.10.300.10 98 197 4.2E-93 T 14-10-2018 TMO_0921 eb39ba223925b28082d6743f54c36fc1 427 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 7 14 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TMO_2661 3d4797ca1d8a967d0138a7841966da9b 266 Gene3D G3DSA:3.40.50.720 5 263 8.1E-58 T 14-10-2018 TMO_2661 3d4797ca1d8a967d0138a7841966da9b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 4.3E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2661 3d4797ca1d8a967d0138a7841966da9b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.3E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2661 3d4797ca1d8a967d0138a7841966da9b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 4.3E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2661 3d4797ca1d8a967d0138a7841966da9b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 4.3E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2661 3d4797ca1d8a967d0138a7841966da9b 266 SUPERFAMILY SSF51735 17 261 7.87E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2661 3d4797ca1d8a967d0138a7841966da9b 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_2661 3d4797ca1d8a967d0138a7841966da9b 266 Pfam PF00106 short chain dehydrogenase 23 205 2.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0437 791f86bad3cd7058954b325acb1dd0bc 292 SMART SM00895 129 277 2.1E-11 T 14-10-2018 IPR011711 GntR, C-terminal TMO_b0437 791f86bad3cd7058954b325acb1dd0bc 292 Pfam PF00392 Bacterial regulatory proteins, gntR family 57 119 1.2E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0437 791f86bad3cd7058954b325acb1dd0bc 292 Gene3D G3DSA:1.10.10.10 54 121 6.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0437 791f86bad3cd7058954b325acb1dd0bc 292 Pfam PF07729 FCD domain 129 276 7.8E-16 T 14-10-2018 IPR011711 GntR, C-terminal TMO_b0437 791f86bad3cd7058954b325acb1dd0bc 292 SMART SM00345 61 119 2.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0437 791f86bad3cd7058954b325acb1dd0bc 292 SUPERFAMILY SSF48008 124 282 1.91E-13 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0437 791f86bad3cd7058954b325acb1dd0bc 292 Gene3D G3DSA:1.20.120.530 123 286 5.1E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0437 791f86bad3cd7058954b325acb1dd0bc 292 SUPERFAMILY SSF46785 52 123 2.2E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0801 c6708fd3955c66eb50ce1430154637ef 333 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 90 104 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site TMO_c0801 c6708fd3955c66eb50ce1430154637ef 333 Gene3D G3DSA:1.10.600.10 3 332 1.5E-106 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily TMO_c0801 c6708fd3955c66eb50ce1430154637ef 333 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 212 224 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site TMO_c0801 c6708fd3955c66eb50ce1430154637ef 333 SUPERFAMILY SSF48576 10 331 1.68E-94 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily TMO_c0801 c6708fd3955c66eb50ce1430154637ef 333 Pfam PF00348 Polyprenyl synthetase 43 285 3.1E-71 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 TMO_d0025 bfc69b607983f37e4022e074a3d972a9 275 Gene3D G3DSA:3.10.129.90 21 265 6.0E-18 T 14-10-2018 TMO_d0025 bfc69b607983f37e4022e074a3d972a9 275 Pfam PF13622 Thioesterase-like superfamily 31 264 1.0E-32 T 14-10-2018 TMO_d0025 bfc69b607983f37e4022e074a3d972a9 275 SUPERFAMILY SSF54637 154 269 3.79E-9 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_2631 4f5903488920f617c18f4a248364812c 207 Pfam PF00573 Ribosomal protein L4/L1 family 16 204 3.4E-61 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 TMO_2631 4f5903488920f617c18f4a248364812c 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 207 30.809 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2631 4f5903488920f617c18f4a248364812c 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 203 5.2E-67 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2631 4f5903488920f617c18f4a248364812c 207 SUPERFAMILY SSF52166 1 206 4.19E-70 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TMO_2631 4f5903488920f617c18f4a248364812c 207 Gene3D G3DSA:3.40.1370.10 2 207 9.3E-71 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 6.4E-31 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 Gene3D G3DSA:1.20.140.10 234 379 8.7E-37 T 14-10-2018 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.8E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 SUPERFAMILY SSF56645 2 241 1.83E-80 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 Gene3D G3DSA:2.40.110.10 121 233 4.4E-43 T 14-10-2018 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 PIRSF PIRSF016578 126 361 1.3E-8 T 14-10-2018 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 PIRSF PIRSF016578 1 108 0.015 T 14-10-2018 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 Gene3D G3DSA:1.10.540.10 1 120 1.9E-36 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 4.0E-40 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_b0368 e73a54ded104d3afc3e76daf13b2f532 386 SUPERFAMILY SSF47203 229 375 8.54E-39 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_c0231 8c1e10e8bd70bae5518ce3b388ada2d6 558 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.4E-135 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TMO_c0231 8c1e10e8bd70bae5518ce3b388ada2d6 558 Pfam PF02463 RecF/RecN/SMC N terminal domain 15 512 1.1E-13 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TMO_c0231 8c1e10e8bd70bae5518ce3b388ada2d6 558 PIRSF PIRSF003128 1 557 1.5E-150 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TMO_c0231 8c1e10e8bd70bae5518ce3b388ada2d6 558 Gene3D G3DSA:3.40.50.300 1 246 7.8E-40 T 14-10-2018 TMO_c0231 8c1e10e8bd70bae5518ce3b388ada2d6 558 SUPERFAMILY SSF52540 3 505 1.42E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0231 8c1e10e8bd70bae5518ce3b388ada2d6 558 SUPERFAMILY SSF52540 1 217 8.69E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0231 8c1e10e8bd70bae5518ce3b388ada2d6 558 Gene3D G3DSA:3.40.50.300 283 553 1.4E-51 T 14-10-2018 TMO_2995 8a040ab2d295c8018f1d87655f9a1b2e 241 Gene3D G3DSA:2.60.120.10 4 148 2.8E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_2995 8a040ab2d295c8018f1d87655f9a1b2e 241 SUPERFAMILY SSF51206 8 146 1.06E-25 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like TMO_2995 8a040ab2d295c8018f1d87655f9a1b2e 241 Pfam PF13545 Crp-like helix-turn-helix domain 153 228 3.3E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_2995 8a040ab2d295c8018f1d87655f9a1b2e 241 Pfam PF00027 Cyclic nucleotide-binding domain 36 120 2.0E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_2995 8a040ab2d295c8018f1d87655f9a1b2e 241 SMART SM00419 174 222 2.4E-9 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_2995 8a040ab2d295c8018f1d87655f9a1b2e 241 SMART SM00100 13 133 5.3E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_2995 8a040ab2d295c8018f1d87655f9a1b2e 241 Gene3D G3DSA:1.10.10.10 151 232 2.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2995 8a040ab2d295c8018f1d87655f9a1b2e 241 SUPERFAMILY SSF46785 153 230 8.44E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2995 8a040ab2d295c8018f1d87655f9a1b2e 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 181 195 3.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2995 8a040ab2d295c8018f1d87655f9a1b2e 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 195 211 3.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1883 f94bad48a1ba51e31c2936cf0f222c85 329 SUPERFAMILY SSF53686 8 322 1.57E-91 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_1883 f94bad48a1ba51e31c2936cf0f222c85 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 314 4.4E-75 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_1883 f94bad48a1ba51e31c2936cf0f222c85 329 Gene3D G3DSA:3.40.50.1100 54 151 3.2E-110 T 14-10-2018 TMO_1883 f94bad48a1ba51e31c2936cf0f222c85 329 Gene3D G3DSA:3.40.50.1100 17 318 3.2E-110 T 14-10-2018 TMO_1789 36d0867d6614349bef58e4de7497c900 164 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 35 164 32.781 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid TMO_1789 36d0867d6614349bef58e4de7497c900 164 Pfam PF00380 Ribosomal protein S9/S16 44 164 4.5E-47 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 TMO_1789 36d0867d6614349bef58e4de7497c900 164 ProSitePatterns PS00360 Ribosomal protein S9 signature. 103 121 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 TMO_1789 36d0867d6614349bef58e4de7497c900 164 SUPERFAMILY SSF54211 39 164 5.69E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_1789 36d0867d6614349bef58e4de7497c900 164 Gene3D G3DSA:3.30.230.10 36 164 1.5E-51 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_1333 1ae3288c53b9ed1072617259b6eba058 298 Gene3D G3DSA:3.40.50.1980 159 296 4.7E-36 T 14-10-2018 TMO_1333 1ae3288c53b9ed1072617259b6eba058 298 SUPERFAMILY SSF53807 42 291 1.3E-41 T 14-10-2018 TMO_1333 1ae3288c53b9ed1072617259b6eba058 298 Gene3D G3DSA:3.40.50.1980 39 158 4.4E-33 T 14-10-2018 TMO_1333 1ae3288c53b9ed1072617259b6eba058 298 Pfam PF01497 Periplasmic binding protein 44 271 1.9E-25 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain TMO_b0014 90162fee77eb1538f46e0b5e116d889f 127 Gene3D G3DSA:3.10.450.40 9 123 1.6E-23 T 14-10-2018 TMO_b0014 90162fee77eb1538f46e0b5e116d889f 127 SUPERFAMILY SSF160719 23 122 2.09E-29 T 14-10-2018 TMO_b0014 90162fee77eb1538f46e0b5e116d889f 127 Pfam PF04965 Gene 25-like lysozyme 30 114 2.0E-18 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD TMO_a0037 917f589e5a604553ef344ff6725aa272 141 SUPERFAMILY SSF88723 1 116 4.21E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily TMO_a0037 917f589e5a604553ef344ff6725aa272 141 Pfam PF01850 PIN domain 4 117 9.9E-7 T 14-10-2018 IPR002716 PIN domain TMO_2696 d67e3a96bdbd24f7378a6aa34efa26ad 584 Gene3D G3DSA:2.160.20.10 468 567 8.5E-6 T 14-10-2018 IPR012334 Pectin lyase fold TMO_2696 d67e3a96bdbd24f7378a6aa34efa26ad 584 SMART SM00710 515 542 370.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_2696 d67e3a96bdbd24f7378a6aa34efa26ad 584 SMART SM00710 267 314 3500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_2696 d67e3a96bdbd24f7378a6aa34efa26ad 584 SMART SM00710 240 261 740.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_2696 d67e3a96bdbd24f7378a6aa34efa26ad 584 SMART SM00710 171 199 3500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_2696 d67e3a96bdbd24f7378a6aa34efa26ad 584 SMART SM00710 493 514 480.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat TMO_2696 d67e3a96bdbd24f7378a6aa34efa26ad 584 Gene3D G3DSA:2.160.20.10 93 352 1.4E-8 T 14-10-2018 IPR012334 Pectin lyase fold TMO_2696 d67e3a96bdbd24f7378a6aa34efa26ad 584 SUPERFAMILY SSF51126 97 568 6.2E-12 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor TMO_3251 702838e81ec402ef631087f690ff2dca 126 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 32.087 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3251 702838e81ec402ef631087f690ff2dca 126 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_3251 702838e81ec402ef631087f690ff2dca 126 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 1.8E-48 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3251 702838e81ec402ef631087f690ff2dca 126 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.3E-35 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3251 702838e81ec402ef631087f690ff2dca 126 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.3E-35 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3251 702838e81ec402ef631087f690ff2dca 126 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.3E-35 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3251 702838e81ec402ef631087f690ff2dca 126 Pfam PF01245 Ribosomal protein L19 2 117 3.5E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3251 702838e81ec402ef631087f690ff2dca 126 SUPERFAMILY SSF50104 1 119 1.6E-47 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily TMO_3251 702838e81ec402ef631087f690ff2dca 126 PIRSF PIRSF002191 1 125 2.6E-55 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3251 702838e81ec402ef631087f690ff2dca 126 Gene3D G3DSA:2.30.30.790 2 119 4.2E-17 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2621 f54c186cf0433858a9b440e47f4245ce 105 SMART SM00739 4 31 9.6E-5 T 14-10-2018 IPR005824 KOW TMO_2621 f54c186cf0433858a9b440e47f4245ce 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 103 2.6E-26 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2621 f54c186cf0433858a9b440e47f4245ce 105 Pfam PF00467 KOW motif 7 37 9.5E-7 T 14-10-2018 IPR005824 KOW TMO_2621 f54c186cf0433858a9b440e47f4245ce 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 21.412 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2621 f54c186cf0433858a9b440e47f4245ce 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.3E-38 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2621 f54c186cf0433858a9b440e47f4245ce 105 Gene3D G3DSA:2.30.30.30 2 104 8.6E-39 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 TMO_2621 f54c186cf0433858a9b440e47f4245ce 105 SUPERFAMILY SSF50104 4 101 1.47E-34 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily TMO_2621 f54c186cf0433858a9b440e47f4245ce 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_1956 2bd01bfa85fdf4c21e29cb31e54c3229 395 SUPERFAMILY SSF103473 4 388 3.27E-47 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_1956 2bd01bfa85fdf4c21e29cb31e54c3229 395 Gene3D G3DSA:1.20.1250.20 2 190 1.1E-27 T 14-10-2018 TMO_1956 2bd01bfa85fdf4c21e29cb31e54c3229 395 Gene3D G3DSA:1.20.1250.20 197 391 2.8E-13 T 14-10-2018 TMO_1956 2bd01bfa85fdf4c21e29cb31e54c3229 395 Pfam PF07690 Major Facilitator Superfamily 20 247 1.8E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0365 bc4818a8b2b8ddc324dd6cfdac7759b0 98 Gene3D G3DSA:3.30.2310.40 1 98 1.9E-33 T 14-10-2018 IPR038493 Toxin MqsR superfamily TMO_c0365 bc4818a8b2b8ddc324dd6cfdac7759b0 98 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 97 1.6E-29 T 14-10-2018 IPR031451 mRNA interferase toxin MqsR GO:0009372|GO:0017148|GO:0044010 TMO_1777 c300a8906332ab4c1ef7240b5ae8f1a3 257 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 207 233 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 TMO_1777 c300a8906332ab4c1ef7240b5ae8f1a3 257 Pfam PF01148 Cytidylyltransferase family 2 246 6.7E-54 T 14-10-2018 TMO_c0630 f7c1de287b0f77a169ec4430e00c325a 706 SUPERFAMILY SSF143011 2 81 1.02E-5 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_c0630 f7c1de287b0f77a169ec4430e00c325a 706 Pfam PF13361 UvrD-like helicase C-terminal domain 624 692 5.5E-14 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TMO_c0630 f7c1de287b0f77a169ec4430e00c325a 706 SUPERFAMILY SSF52540 226 696 1.23E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0630 f7c1de287b0f77a169ec4430e00c325a 706 Gene3D G3DSA:3.40.50.300 514 706 6.5E-27 T 14-10-2018 TMO_c0630 f7c1de287b0f77a169ec4430e00c325a 706 Pfam PF13245 AAA domain 239 492 6.9E-8 T 14-10-2018 TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 SUPERFAMILY SSF56059 497 715 7.54E-39 T 14-10-2018 TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 SMART SM00881 14 109 1.2E-29 T 14-10-2018 IPR003781 CoA-binding GO:0048037 TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 170 306 1.6E-43 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 Pfam PF13549 ATP-grasp domain 496 708 6.6E-65 T 14-10-2018 TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 Gene3D G3DSA:3.40.50.720 9 138 2.8E-39 T 14-10-2018 TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 SUPERFAMILY SSF51735 6 145 2.33E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 Gene3D G3DSA:3.40.50.261 310 472 5.2E-32 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 Gene3D G3DSA:3.30.1490.20 515 592 5.7E-75 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 SUPERFAMILY SSF52210 312 466 3.27E-26 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 Gene3D G3DSA:3.40.50.261 139 309 4.2E-45 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 Pfam PF13380 CoA binding domain 18 142 6.4E-18 T 14-10-2018 IPR003781 CoA-binding GO:0048037 TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 Gene3D G3DSA:3.30.470.20 497 706 5.7E-75 T 14-10-2018 TMO_b0292 a9aea5fbbed1f0c6f1580406becd45fd 725 SUPERFAMILY SSF52210 141 306 1.96E-35 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_d0018 e52faf9a2cc186c92d9d08cce9699ed8 360 SMART SM00930 279 354 7.4E-17 T 14-10-2018 IPR018449 NIL domain TMO_d0018 e52faf9a2cc186c92d9d08cce9699ed8 360 Gene3D G3DSA:3.30.70.260 274 354 2.0E-14 T 14-10-2018 TMO_d0018 e52faf9a2cc186c92d9d08cce9699ed8 360 SUPERFAMILY SSF52540 11 252 4.31E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_d0018 e52faf9a2cc186c92d9d08cce9699ed8 360 Gene3D G3DSA:3.40.50.300 9 273 2.8E-85 T 14-10-2018 TMO_d0018 e52faf9a2cc186c92d9d08cce9699ed8 360 Pfam PF09383 NIL domain 282 350 4.6E-17 T 14-10-2018 IPR018449 NIL domain TMO_d0018 e52faf9a2cc186c92d9d08cce9699ed8 360 SUPERFAMILY SSF55021 278 352 5.84E-16 T 14-10-2018 TMO_d0018 e52faf9a2cc186c92d9d08cce9699ed8 360 SMART SM00382 42 230 5.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_d0018 e52faf9a2cc186c92d9d08cce9699ed8 360 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_d0018 e52faf9a2cc186c92d9d08cce9699ed8 360 Pfam PF00005 ABC transporter 33 181 9.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1792 030e7c2af900570f537f7b324b880047 167 Pfam PF13380 CoA binding domain 25 141 8.6E-40 T 14-10-2018 IPR003781 CoA-binding GO:0048037 TMO_1792 030e7c2af900570f537f7b324b880047 167 SMART SM00881 21 115 3.2E-26 T 14-10-2018 IPR003781 CoA-binding GO:0048037 TMO_1792 030e7c2af900570f537f7b324b880047 167 Gene3D G3DSA:3.40.50.720 7 149 1.1E-40 T 14-10-2018 TMO_1792 030e7c2af900570f537f7b324b880047 167 SUPERFAMILY SSF51735 14 144 3.98E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0357 6185b4648f7ecaa841ebeb4aeb58860e 287 Gene3D G3DSA:3.20.20.60 1 286 7.1E-101 T 14-10-2018 TMO_c0357 6185b4648f7ecaa841ebeb4aeb58860e 287 SUPERFAMILY SSF51621 2 283 2.6E-88 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_c0357 6185b4648f7ecaa841ebeb4aeb58860e 287 ProSitePatterns PS00161 Isocitrate lyase signature. 116 121 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 TMO_c0357 6185b4648f7ecaa841ebeb4aeb58860e 287 Pfam PF13714 Phosphoenolpyruvate phosphomutase 7 248 4.8E-57 T 14-10-2018 TMO_c0522 e1aacc490eeb241d1eac4616c7bd2cad 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 270 1.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0522 e1aacc490eeb241d1eac4616c7bd2cad 277 Gene3D G3DSA:1.10.3720.10 1 268 6.2E-59 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0522 e1aacc490eeb241d1eac4616c7bd2cad 277 SUPERFAMILY SSF161098 4 277 1.31E-67 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0215 17d3ccae4101cef422a18acb15b2143d 418 Gene3D G3DSA:3.50.50.60 104 399 1.3E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0215 17d3ccae4101cef422a18acb15b2143d 418 SUPERFAMILY SSF54373 270 360 2.75E-18 T 14-10-2018 TMO_0215 17d3ccae4101cef422a18acb15b2143d 418 Gene3D G3DSA:3.50.50.60 1 71 1.8E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0215 17d3ccae4101cef422a18acb15b2143d 418 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 49.282 T 14-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 TMO_0215 17d3ccae4101cef422a18acb15b2143d 418 Pfam PF01266 FAD dependent oxidoreductase 2 398 1.1E-73 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_0215 17d3ccae4101cef422a18acb15b2143d 418 SUPERFAMILY SSF51905 2 416 3.37E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0215 17d3ccae4101cef422a18acb15b2143d 418 Gene3D G3DSA:3.30.9.10 134 359 1.3E-54 T 14-10-2018 TMO_0337 d8c50e8578da772ce41e2d159bfcf34a 203 PRINTS PR00625 DnaJ domain signature 163 178 1.4E-7 T 14-10-2018 IPR001623 DnaJ domain TMO_0337 d8c50e8578da772ce41e2d159bfcf34a 203 PRINTS PR00625 DnaJ domain signature 180 200 1.4E-7 T 14-10-2018 IPR001623 DnaJ domain TMO_0337 d8c50e8578da772ce41e2d159bfcf34a 203 PRINTS PR00625 DnaJ domain signature 145 163 1.4E-7 T 14-10-2018 IPR001623 DnaJ domain TMO_0337 d8c50e8578da772ce41e2d159bfcf34a 203 SMART SM00271 142 200 6.3E-14 T 14-10-2018 IPR001623 DnaJ domain TMO_0337 d8c50e8578da772ce41e2d159bfcf34a 203 Gene3D G3DSA:1.10.287.110 128 201 2.9E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_0337 d8c50e8578da772ce41e2d159bfcf34a 203 SUPERFAMILY SSF46565 140 197 4.19E-15 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_0337 d8c50e8578da772ce41e2d159bfcf34a 203 Pfam PF00226 DnaJ domain 145 197 6.7E-12 T 14-10-2018 IPR001623 DnaJ domain TMO_2495 1d4f2fd286b08ab2d3181e46c7c41826 554 Gene3D G3DSA:1.10.287.950 260 544 5.4E-52 T 14-10-2018 TMO_2495 1d4f2fd286b08ab2d3181e46c7c41826 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 516 3.8E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2495 1d4f2fd286b08ab2d3181e46c7c41826 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 465 494 2.8E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2495 1d4f2fd286b08ab2d3181e46c7c41826 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 417 446 2.8E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2495 1d4f2fd286b08ab2d3181e46c7c41826 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 388 415 2.8E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2495 1d4f2fd286b08ab2d3181e46c7c41826 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 20 2.8E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2495 1d4f2fd286b08ab2d3181e46c7c41826 554 SUPERFAMILY SSF58104 229 543 2.22E-58 T 14-10-2018 TMO_2495 1d4f2fd286b08ab2d3181e46c7c41826 554 SMART SM00304 201 254 4.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2495 1d4f2fd286b08ab2d3181e46c7c41826 554 SMART SM00283 290 544 3.9E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2495 1d4f2fd286b08ab2d3181e46c7c41826 554 Gene3D G3DSA:1.20.1480.50 161 259 3.0E-8 T 14-10-2018 TMO_1875 b87b623a099bced6f3a63be47163396a 257 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 11 255 1.6E-75 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria TMO_1875 b87b623a099bced6f3a63be47163396a 257 Pfam PF02405 Permease MlaE 44 252 4.2E-78 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 TMO_d0048 dd5e4d65376905e4b92dc74a9b1bdcda 260 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_d0048 dd5e4d65376905e4b92dc74a9b1bdcda 260 Pfam PF00005 ABC transporter 23 172 7.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_d0048 dd5e4d65376905e4b92dc74a9b1bdcda 260 SUPERFAMILY SSF52540 9 234 5.9E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_d0048 dd5e4d65376905e4b92dc74a9b1bdcda 260 Gene3D G3DSA:3.40.50.300 5 258 1.7E-62 T 14-10-2018 TMO_d0048 dd5e4d65376905e4b92dc74a9b1bdcda 260 SMART SM00382 32 221 2.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0833 22e80a299b939ae7c4f03ed6299a1172 229 Gene3D G3DSA:3.90.226.10 1 227 5.1E-53 T 14-10-2018 TMO_c0833 22e80a299b939ae7c4f03ed6299a1172 229 SUPERFAMILY SSF52096 5 226 5.71E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_c0833 22e80a299b939ae7c4f03ed6299a1172 229 Pfam PF00378 Enoyl-CoA hydratase/isomerase 6 224 2.5E-27 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 Gene3D G3DSA:2.40.50.140 645 742 3.1E-12 T 14-10-2018 TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 Hamap MF_01895 Ribonuclease R [rnr]. 32 724 52.114 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 SMART SM00955 264 595 5.8E-156 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 Pfam PF00575 S1 RNA binding domain 641 712 3.2E-7 T 14-10-2018 IPR003029 S1 domain GO:0003676 TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 130 721 7.7E-153 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 SUPERFAMILY SSF50249 232 641 1.26E-130 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 Pfam PF08461 Ribonuclease R winged-helix domain 16 65 8.7E-6 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 SUPERFAMILY SSF50249 641 723 2.57E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 TIGRFAM TIGR02063 RNase_R: ribonuclease R 13 725 2.2E-203 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 Pfam PF00773 RNB domain 264 593 2.5E-98 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TMO_2553 3abf8c54b7d42ffb62925265678042ac 781 SMART SM00316 641 724 1.0E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 TMO_3405 59f7a5154b7b1f7cf92fd11dad03e2e3 350 Gene3D G3DSA:3.20.20.210 2 349 3.7E-122 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TMO_3405 59f7a5154b7b1f7cf92fd11dad03e2e3 350 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TMO_3405 59f7a5154b7b1f7cf92fd11dad03e2e3 350 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 21 30 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TMO_3405 59f7a5154b7b1f7cf92fd11dad03e2e3 350 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 344 2.3E-111 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TMO_3405 59f7a5154b7b1f7cf92fd11dad03e2e3 350 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 8 344 1.5E-118 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TMO_3405 59f7a5154b7b1f7cf92fd11dad03e2e3 350 SUPERFAMILY SSF51726 5 346 3.53E-101 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TMO_3405 59f7a5154b7b1f7cf92fd11dad03e2e3 350 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 5 346 45.288 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TMO_1143 0411164dcc399a7a7a186b4f378435c9 305 SUPERFAMILY SSF103481 198 300 2.62E-7 T 14-10-2018 TMO_1143 0411164dcc399a7a7a186b4f378435c9 305 SUPERFAMILY SSF103481 53 153 1.83E-11 T 14-10-2018 TMO_1143 0411164dcc399a7a7a186b4f378435c9 305 Pfam PF00892 EamA-like transporter family 165 298 1.3E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1143 0411164dcc399a7a7a186b4f378435c9 305 Pfam PF00892 EamA-like transporter family 19 149 5.2E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3049 ac0ae9da40f0275c5cc5f6eff5aac021 339 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 14 325 6.3E-94 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 TMO_3049 ac0ae9da40f0275c5cc5f6eff5aac021 339 SUPERFAMILY SSF53474 2 312 7.64E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3049 ac0ae9da40f0275c5cc5f6eff5aac021 339 PIRSF PIRSF006431 4 330 4.5E-112 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 TMO_3049 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 125 138 5.5E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3049 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 65 80 5.5E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3049 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 5.5E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3049 ac0ae9da40f0275c5cc5f6eff5aac021 339 Gene3D G3DSA:3.40.50.1820 5 328 2.0E-88 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3049 ac0ae9da40f0275c5cc5f6eff5aac021 339 Pfam PF00561 alpha/beta hydrolase fold 41 150 2.7E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3049 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 111 125 1.2E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TMO_3049 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 68 79 1.2E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TMO_3049 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 42 50 1.2E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TMO_3001 2bc950ee091e0dd457596b3e1322fb13 187 Gene3D G3DSA:1.10.1740.10 1 90 1.8E-22 T 14-10-2018 TMO_3001 2bc950ee091e0dd457596b3e1322fb13 187 SUPERFAMILY SSF88659 101 177 4.86E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_3001 2bc950ee091e0dd457596b3e1322fb13 187 Pfam PF08281 Sigma-70, region 4 121 171 3.8E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_3001 2bc950ee091e0dd457596b3e1322fb13 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 174 9.8E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_3001 2bc950ee091e0dd457596b3e1322fb13 187 SUPERFAMILY SSF88946 2 95 3.77E-23 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_3001 2bc950ee091e0dd457596b3e1322fb13 187 Gene3D G3DSA:1.10.10.10 96 179 9.6E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3001 2bc950ee091e0dd457596b3e1322fb13 187 Pfam PF04542 Sigma-70 region 2 24 89 4.4E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_3401 0dc11e0c817e8c6ca80ba645a4aac8d8 222 Gene3D G3DSA:3.40.50.300 1 194 6.2E-57 T 14-10-2018 TMO_3401 0dc11e0c817e8c6ca80ba645a4aac8d8 222 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 24.594 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TMO_3401 0dc11e0c817e8c6ca80ba645a4aac8d8 222 SUPERFAMILY SSF52540 1 192 3.55E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3401 0dc11e0c817e8c6ca80ba645a4aac8d8 222 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 174 1.6E-37 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TMO_3401 0dc11e0c817e8c6ca80ba645a4aac8d8 222 Pfam PF01121 Dephospho-CoA kinase 2 174 1.5E-43 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TMO_0772 16fd8f4f079eae6c694d9590be8ca951 106 Pfam PF16083 LydA holin phage, holin superfamily III 21 96 4.4E-16 T 14-10-2018 IPR032126 LydA-like holin TMO_2143 66992a0f057fb82a72a0433af4223af6 391 TIGRFAM TIGR00843 benE: benzoate transporter 3 373 7.6E-87 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 TMO_2143 66992a0f057fb82a72a0433af4223af6 391 Pfam PF03594 Benzoate membrane transport protein 3 374 3.1E-115 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 TMO_c0702 70a812d012192a1bec25ad82ae3bdabd 846 Pfam PF17092 Penicillin-binding protein OB-like domain 323 457 2.1E-21 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_c0702 70a812d012192a1bec25ad82ae3bdabd 846 SUPERFAMILY SSF53955 45 259 9.28E-74 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_c0702 70a812d012192a1bec25ad82ae3bdabd 846 Gene3D G3DSA:3.40.710.10 257 336 3.5E-10 T 14-10-2018 TMO_c0702 70a812d012192a1bec25ad82ae3bdabd 846 Gene3D G3DSA:2.40.50.140 337 431 1.9E-17 T 14-10-2018 TMO_c0702 70a812d012192a1bec25ad82ae3bdabd 846 Gene3D G3DSA:3.40.710.10 442 797 7.8E-102 T 14-10-2018 TMO_c0702 70a812d012192a1bec25ad82ae3bdabd 846 Gene3D G3DSA:1.10.3810.10 52 251 2.2E-74 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_c0702 70a812d012192a1bec25ad82ae3bdabd 846 SUPERFAMILY SSF56601 217 808 4.05E-126 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_c0702 70a812d012192a1bec25ad82ae3bdabd 846 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 68 755 1.6E-182 T 14-10-2018 TMO_c0702 70a812d012192a1bec25ad82ae3bdabd 846 Pfam PF00912 Transglycosylase 58 235 6.2E-61 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_c0702 70a812d012192a1bec25ad82ae3bdabd 846 Pfam PF00905 Penicillin binding protein transpeptidase domain 459 739 5.8E-27 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TMO_b0060 f2d602ad45d986955b10d6351cfef585 423 Pfam PF01266 FAD dependent oxidoreductase 9 403 1.1E-44 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_b0060 f2d602ad45d986955b10d6351cfef585 423 Gene3D G3DSA:3.50.50.60 108 409 5.6E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0060 f2d602ad45d986955b10d6351cfef585 423 Gene3D G3DSA:3.30.9.10 142 366 5.6E-38 T 14-10-2018 TMO_b0060 f2d602ad45d986955b10d6351cfef585 423 SUPERFAMILY SSF51905 8 421 4.66E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0060 f2d602ad45d986955b10d6351cfef585 423 Gene3D G3DSA:3.50.50.60 10 58 1.0E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0060 f2d602ad45d986955b10d6351cfef585 423 SUPERFAMILY SSF54373 276 364 1.57E-9 T 14-10-2018 TMO_b0517 3da4b0832e5bd7d951648d6724597349 225 SMART SM00895 94 216 3.1E-17 T 14-10-2018 IPR011711 GntR, C-terminal TMO_b0517 3da4b0832e5bd7d951648d6724597349 225 Gene3D G3DSA:1.20.120.530 88 223 6.5E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0517 3da4b0832e5bd7d951648d6724597349 225 SUPERFAMILY SSF48008 89 221 7.32E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0517 3da4b0832e5bd7d951648d6724597349 225 SMART SM00345 26 84 3.9E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0517 3da4b0832e5bd7d951648d6724597349 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0517 3da4b0832e5bd7d951648d6724597349 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0517 3da4b0832e5bd7d951648d6724597349 225 SUPERFAMILY SSF46785 19 88 1.87E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0517 3da4b0832e5bd7d951648d6724597349 225 Gene3D G3DSA:1.10.10.10 18 85 1.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0517 3da4b0832e5bd7d951648d6724597349 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 9.0E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0517 3da4b0832e5bd7d951648d6724597349 225 Pfam PF07729 FCD domain 94 215 6.5E-24 T 14-10-2018 IPR011711 GntR, C-terminal TMO_c0106 2cb9470032bfa80089abdd169583f252 697 Gene3D G3DSA:1.10.220.120 26 86 1.1E-21 T 14-10-2018 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 Pfam PF04542 Sigma-70 region 2 463 532 2.0E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 Pfam PF04539 Sigma-70 region 3 542 618 7.6E-30 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 SUPERFAMILY SSF88659 536 609 3.23E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_c0106 2cb9470032bfa80089abdd169583f252 697 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 459 695 6.1E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 Pfam PF03979 Sigma-70 factor, region 1.1 30 98 3.9E-22 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 SUPERFAMILY SSF88659 593 695 3.27E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_c0106 2cb9470032bfa80089abdd169583f252 697 Pfam PF04546 Sigma-70, non-essential region 160 429 1.3E-37 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 18 696 43.851 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 Pfam PF00140 Sigma-70 factor, region 1.2 118 149 2.7E-13 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 459 684 1.3E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 656 682 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 Gene3D G3DSA:1.10.10.10 613 697 1.2E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0106 2cb9470032bfa80089abdd169583f252 697 Pfam PF04545 Sigma-70, region 4 631 684 1.3E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 487 500 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 PRINTS PR00046 Major sigma-70 factor signature 635 647 1.5E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 PRINTS PR00046 Major sigma-70 factor signature 511 519 1.5E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 PRINTS PR00046 Major sigma-70 factor signature 487 500 1.5E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 PRINTS PR00046 Major sigma-70 factor signature 656 671 1.5E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 PRINTS PR00046 Major sigma-70 factor signature 671 682 1.5E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 SUPERFAMILY SSF88946 135 530 2.83E-91 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_c0106 2cb9470032bfa80089abdd169583f252 697 Gene3D G3DSA:1.10.10.10 536 611 9.2E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 Gene3D G3DSA:2.40.33.10 75 171 7.2E-164 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 Pfam PF00224 Pyruvate kinase, barrel domain 7 337 9.2E-112 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 SUPERFAMILY SSF50800 75 169 1.53E-24 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 SUPERFAMILY SSF51621 4 341 1.71E-93 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 Gene3D G3DSA:3.20.20.60 7 334 7.2E-164 T 14-10-2018 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 ProSitePatterns PS00110 Pyruvate kinase active site signature. 214 226 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 7 470 9.4E-149 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 470 2.3E-28 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 SUPERFAMILY SSF52935 322 471 7.06E-37 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 PRINTS PR01050 Pyruvate kinase family signature 312 328 1.7E-63 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 PRINTS PR01050 Pyruvate kinase family signature 216 242 1.7E-63 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 PRINTS PR01050 Pyruvate kinase family signature 293 311 1.7E-63 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 PRINTS PR01050 Pyruvate kinase family signature 64 80 1.7E-63 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 PRINTS PR01050 Pyruvate kinase family signature 243 267 1.7E-63 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 PRINTS PR01050 Pyruvate kinase family signature 268 292 1.7E-63 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 PRINTS PR01050 Pyruvate kinase family signature 189 203 1.7E-63 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_1896 b0fa51de72bfa9a82b4fc554fafa9250 475 Gene3D G3DSA:3.40.1380.20 335 468 7.2E-164 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 1.0E-49 T 14-10-2018 TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 Gene3D G3DSA:3.40.50.720 2 255 1.8E-71 T 14-10-2018 TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 4.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 4.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 4.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 SUPERFAMILY SSF51735 12 256 5.27E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 192 9.6E-6 T 14-10-2018 TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 5.8E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 5.8E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 5.8E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 5.8E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 5.8E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0135 cad14adf0632ec3b2b8ceea92644e6fa 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 5.8E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0524 02708c71a06301530c6fede27cc4343a 289 Pfam PF13452 N-terminal half of MaoC dehydratase 13 143 2.0E-11 T 14-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 TMO_0524 02708c71a06301530c6fede27cc4343a 289 SUPERFAMILY SSF54637 182 286 1.03E-13 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0524 02708c71a06301530c6fede27cc4343a 289 Gene3D G3DSA:3.10.129.10 15 285 6.5E-26 T 14-10-2018 TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 PIRSF PIRSF006288 25 915 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 SUPERFAMILY SSF55021 727 784 3.33E-11 T 14-10-2018 TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 Pfam PF01966 HD domain 506 616 3.0E-10 T 14-10-2018 IPR006674 HD domain TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 SMART SM00471 482 629 2.9E-6 T 14-10-2018 IPR003607 HD/PDEase domain TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 SUPERFAMILY SSF81301 43 199 7.77E-32 T 14-10-2018 TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 Pfam PF08335 GlnD PII-uridylyltransferase 208 346 3.7E-38 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 50 908 2.2E-300 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 SUPERFAMILY SSF81891 393 629 1.65E-20 T 14-10-2018 TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 Gene3D G3DSA:1.10.3210.10 469 620 1.4E-9 T 14-10-2018 TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 SUPERFAMILY SSF81593 227 337 3.3E-11 T 14-10-2018 TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 Pfam PF01842 ACT domain 838 888 1.9E-7 T 14-10-2018 IPR002912 ACT domain TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 Gene3D G3DSA:3.30.70.260 834 913 2.1E-7 T 14-10-2018 TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 920 293.548 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 TMO_3492 f636ad3b8b6d163156b3f2e075d193a1 933 SUPERFAMILY SSF55021 835 910 1.25E-12 T 14-10-2018 TMO_b0102 ee55b24450ad3d8e14010a9236c532e0 356 SUPERFAMILY SSF50331 243 346 1.36E-16 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_b0102 ee55b24450ad3d8e14010a9236c532e0 356 Gene3D G3DSA:2.40.50.140 288 338 3.1E-17 T 14-10-2018 TMO_b0102 ee55b24450ad3d8e14010a9236c532e0 356 SMART SM00382 34 218 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0102 ee55b24450ad3d8e14010a9236c532e0 356 Pfam PF00005 ABC transporter 26 168 2.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0102 ee55b24450ad3d8e14010a9236c532e0 356 Gene3D G3DSA:3.40.50.300 3 228 2.0E-55 T 14-10-2018 TMO_b0102 ee55b24450ad3d8e14010a9236c532e0 356 Gene3D G3DSA:2.40.50.940 229 346 3.1E-17 T 14-10-2018 TMO_b0102 ee55b24450ad3d8e14010a9236c532e0 356 SUPERFAMILY SSF52540 3 251 1.55E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0102 ee55b24450ad3d8e14010a9236c532e0 356 Pfam PF08402 TOBE domain 281 329 1.0E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_3530 d9a2ecfc907dac8a3d26001d11feb237 310 SMART SM00563 67 182 4.4E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TMO_3530 d9a2ecfc907dac8a3d26001d11feb237 310 Pfam PF01553 Acyltransferase 62 177 2.2E-21 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TMO_3530 d9a2ecfc907dac8a3d26001d11feb237 310 SUPERFAMILY SSF69593 40 253 2.22E-29 T 14-10-2018 TMO_3348 d42c1132491ba5194b765dc47af38559 437 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 3 437 41.772 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TMO_3348 d42c1132491ba5194b765dc47af38559 437 Pfam PF07724 AAA domain (Cdc48 subfamily) 185 323 1.6E-39 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_3348 d42c1132491ba5194b765dc47af38559 437 SUPERFAMILY SSF52540 7 433 2.37E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3348 d42c1132491ba5194b765dc47af38559 437 SMART SM01086 329 423 2.2E-19 T 14-10-2018 IPR019489 Clp ATPase, C-terminal TMO_3348 d42c1132491ba5194b765dc47af38559 437 Gene3D G3DSA:1.10.8.60 329 434 2.2E-37 T 14-10-2018 TMO_3348 d42c1132491ba5194b765dc47af38559 437 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 7 437 1.0E-188 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TMO_3348 d42c1132491ba5194b765dc47af38559 437 SMART SM00382 51 326 2.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3348 d42c1132491ba5194b765dc47af38559 437 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 104 1.5E-6 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_1198 dfb5dbd2cad213536f3ef3955a9a8cb4 129 Pfam PF01740 STAS domain 34 121 1.4E-12 T 14-10-2018 IPR002645 STAS domain TMO_1198 dfb5dbd2cad213536f3ef3955a9a8cb4 129 Gene3D G3DSA:3.30.750.24 16 127 6.5E-22 T 14-10-2018 IPR036513 STAS domain superfamily TMO_1198 dfb5dbd2cad213536f3ef3955a9a8cb4 129 SUPERFAMILY SSF52091 25 125 8.83E-20 T 14-10-2018 IPR036513 STAS domain superfamily TMO_1198 dfb5dbd2cad213536f3ef3955a9a8cb4 129 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 18 121 8.3E-21 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TMO_b0519 1cf7fae064d7202ca62fb8e6a8235a36 544 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 260 274 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 TMO_b0519 1cf7fae064d7202ca62fb8e6a8235a36 544 PIRSF PIRSF000137 1 542 1.2E-151 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 TMO_b0519 1cf7fae064d7202ca62fb8e6a8235a36 544 Gene3D G3DSA:3.30.560.10 41 473 3.5E-182 T 14-10-2018 TMO_b0519 1cf7fae064d7202ca62fb8e6a8235a36 544 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 TMO_b0519 1cf7fae064d7202ca62fb8e6a8235a36 544 Pfam PF00732 GMC oxidoreductase 3 301 2.1E-89 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 TMO_b0519 1cf7fae064d7202ca62fb8e6a8235a36 544 SUPERFAMILY SSF51905 2 536 4.07E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0519 1cf7fae064d7202ca62fb8e6a8235a36 544 SUPERFAMILY SSF54373 296 478 3.73E-56 T 14-10-2018 TMO_b0519 1cf7fae064d7202ca62fb8e6a8235a36 544 Gene3D G3DSA:3.50.50.60 4 526 3.5E-182 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0519 1cf7fae064d7202ca62fb8e6a8235a36 544 Pfam PF05199 GMC oxidoreductase 393 528 2.8E-40 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 TMO_2938 7aef9ab39c0eb0f9499cdcf791bea2f8 224 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 1 216 28.641 T 14-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 TMO_2938 7aef9ab39c0eb0f9499cdcf791bea2f8 224 Gene3D G3DSA:1.10.1760.20 1 210 8.4E-49 T 14-10-2018 TMO_2938 7aef9ab39c0eb0f9499cdcf791bea2f8 224 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 208 1.2E-44 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 TMO_2938 7aef9ab39c0eb0f9499cdcf791bea2f8 224 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 1 206 1.5E-88 T 14-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 TMO_2622 036820325453fc91b44aa9d70118d1b7 122 SMART SM01374 1 122 6.6E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TMO_2622 036820325453fc91b44aa9d70118d1b7 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.3E-57 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 TMO_2622 036820325453fc91b44aa9d70118d1b7 122 Pfam PF00238 Ribosomal protein L14p/L23e 2 122 2.2E-55 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TMO_2622 036820325453fc91b44aa9d70118d1b7 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2622 036820325453fc91b44aa9d70118d1b7 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.75 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TMO_2622 036820325453fc91b44aa9d70118d1b7 122 SUPERFAMILY SSF50193 2 121 1.83E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TMO_2622 036820325453fc91b44aa9d70118d1b7 122 Gene3D G3DSA:2.40.150.20 1 122 1.0E-54 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TMO_2172 97f8664188d9fda7c9bd63ef3b6a73d7 164 Gene3D G3DSA:1.10.10.10 29 155 7.9E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2172 97f8664188d9fda7c9bd63ef3b6a73d7 164 Pfam PF13730 Helix-turn-helix domain 51 105 7.6E-10 T 14-10-2018 TMO_2172 97f8664188d9fda7c9bd63ef3b6a73d7 164 SUPERFAMILY SSF46785 36 130 8.78E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0934 87643738911f73b8a99967dd1dbc3208 307 PIRSF PIRSF000770 14 297 3.6E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 SUPERFAMILY SSF88659 193 288 2.8E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_0934 87643738911f73b8a99967dd1dbc3208 307 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 SUPERFAMILY SSF88946 19 124 1.44E-39 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 Pfam PF00140 Sigma-70 factor, region 1.2 22 47 1.5E-6 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 19 286 3.2E-102 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 Pfam PF04542 Sigma-70 region 2 56 124 2.0E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 PRINTS PR00046 Major sigma-70 factor signature 80 93 2.4E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 PRINTS PR00046 Major sigma-70 factor signature 256 271 2.4E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 PRINTS PR00046 Major sigma-70 factor signature 104 112 2.4E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 PRINTS PR00046 Major sigma-70 factor signature 271 282 2.4E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 PRINTS PR00046 Major sigma-70 factor signature 237 249 2.4E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 Gene3D G3DSA:1.20.140.160 145 289 1.1E-12 T 14-10-2018 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 Gene3D G3DSA:1.10.601.10 20 123 2.2E-34 T 14-10-2018 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 Pfam PF04545 Sigma-70, region 4 234 282 1.7E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TMO_0934 87643738911f73b8a99967dd1dbc3208 307 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 283 1.1E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_b0601 42be93e4a13c107e6012c7ae9f1e1ef0 295 Pfam PF00582 Universal stress protein family 12 148 6.6E-28 T 14-10-2018 IPR006016 UspA TMO_b0601 42be93e4a13c107e6012c7ae9f1e1ef0 295 Pfam PF00582 Universal stress protein family 155 292 3.8E-15 T 14-10-2018 IPR006016 UspA TMO_b0601 42be93e4a13c107e6012c7ae9f1e1ef0 295 Gene3D G3DSA:3.40.50.620 153 292 8.1E-20 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_b0601 42be93e4a13c107e6012c7ae9f1e1ef0 295 SUPERFAMILY SSF52402 11 149 3.42E-28 T 14-10-2018 TMO_b0601 42be93e4a13c107e6012c7ae9f1e1ef0 295 SUPERFAMILY SSF52402 154 293 3.77E-18 T 14-10-2018 TMO_b0601 42be93e4a13c107e6012c7ae9f1e1ef0 295 Gene3D G3DSA:3.40.50.620 9 152 1.6E-30 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_b0601 42be93e4a13c107e6012c7ae9f1e1ef0 295 PRINTS PR01438 Universal stress protein signature 155 173 2.5E-13 T 14-10-2018 IPR006015 Universal stress protein A TMO_b0601 42be93e4a13c107e6012c7ae9f1e1ef0 295 PRINTS PR01438 Universal stress protein signature 270 292 2.5E-13 T 14-10-2018 IPR006015 Universal stress protein A TMO_b0601 42be93e4a13c107e6012c7ae9f1e1ef0 295 PRINTS PR01438 Universal stress protein signature 252 264 2.5E-13 T 14-10-2018 IPR006015 Universal stress protein A TMO_2184 ef0acd0c25334f293f3b6b703f66a4c5 381 Gene3D G3DSA:3.50.50.60 11 361 1.4E-110 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2184 ef0acd0c25334f293f3b6b703f66a4c5 381 SUPERFAMILY SSF54373 168 300 2.55E-37 T 14-10-2018 TMO_2184 ef0acd0c25334f293f3b6b703f66a4c5 381 Gene3D G3DSA:3.30.9.60 75 296 1.4E-110 T 14-10-2018 TMO_2184 ef0acd0c25334f293f3b6b703f66a4c5 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 322 2.3E-10 T 14-10-2018 TMO_2184 ef0acd0c25334f293f3b6b703f66a4c5 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 2.3E-10 T 14-10-2018 TMO_2184 ef0acd0c25334f293f3b6b703f66a4c5 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 144 159 2.3E-10 T 14-10-2018 TMO_2184 ef0acd0c25334f293f3b6b703f66a4c5 381 SUPERFAMILY SSF51905 8 378 3.22E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_d0014 4106b2ab78a447cad0d41e67eb258c2f 91 Gene3D G3DSA:3.30.160.250 1 85 9.5E-20 T 14-10-2018 TMO_d0014 4106b2ab78a447cad0d41e67eb258c2f 91 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 84 6.3E-23 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system TMO_d0014 4106b2ab78a447cad0d41e67eb258c2f 91 SUPERFAMILY SSF143100 2 64 1.96E-16 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like TMO_1544 297fb959ba726f9e98473ef397223e16 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 8.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1544 297fb959ba726f9e98473ef397223e16 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 8.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1544 297fb959ba726f9e98473ef397223e16 197 SUPERFAMILY SSF48498 97 183 3.61E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1544 297fb959ba726f9e98473ef397223e16 197 Gene3D G3DSA:1.10.357.10 4 193 4.9E-34 T 14-10-2018 TMO_1544 297fb959ba726f9e98473ef397223e16 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 4.4E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1544 297fb959ba726f9e98473ef397223e16 197 SUPERFAMILY SSF46689 2 78 3.23E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0523 bf266323e67876831aff6c113be1bb0a 356 Gene3D G3DSA:3.40.50.300 8 226 1.7E-65 T 14-10-2018 TMO_c0523 bf266323e67876831aff6c113be1bb0a 356 SUPERFAMILY SSF52540 8 247 9.0E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0523 bf266323e67876831aff6c113be1bb0a 356 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0523 bf266323e67876831aff6c113be1bb0a 356 Gene3D G3DSA:2.40.50.940 227 342 5.1E-20 T 14-10-2018 TMO_c0523 bf266323e67876831aff6c113be1bb0a 356 SMART SM00382 33 216 2.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0523 bf266323e67876831aff6c113be1bb0a 356 Pfam PF08402 TOBE domain 270 342 3.1E-12 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_c0523 bf266323e67876831aff6c113be1bb0a 356 SUPERFAMILY SSF50331 241 349 5.83E-18 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_c0523 bf266323e67876831aff6c113be1bb0a 356 Pfam PF00005 ABC transporter 24 166 1.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0523 bf266323e67876831aff6c113be1bb0a 356 Gene3D G3DSA:2.40.50.140 277 334 5.1E-20 T 14-10-2018 TMO_3258 403c4643db2044899d5b4491b60e3384 374 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 307 1.6E-23 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_3258 403c4643db2044899d5b4491b60e3384 374 Gene3D G3DSA:3.40.190.170 29 344 5.1E-60 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_1262 410da4678de2e9a821d020ba036b970d 302 Gene3D G3DSA:3.60.15.10 15 302 1.1E-114 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_1262 410da4678de2e9a821d020ba036b970d 302 SMART SM00849 29 219 7.3E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_1262 410da4678de2e9a821d020ba036b970d 302 Pfam PF00753 Metallo-beta-lactamase superfamily 39 219 7.0E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_1262 410da4678de2e9a821d020ba036b970d 302 SUPERFAMILY SSF56281 23 302 2.57E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_1104 6212f4b488cead05994131528508ca6b 220 SUPERFAMILY SSF75708 52 220 6.8E-36 T 14-10-2018 TMO_1104 6212f4b488cead05994131528508ca6b 220 Gene3D G3DSA:1.10.287.500 113 166 5.0E-6 T 14-10-2018 TMO_1104 6212f4b488cead05994131528508ca6b 220 Pfam PF04344 Chemotaxis phosphatase, CheZ 122 219 8.6E-8 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 TMO_2888 a0ff05468441692bd21f3c36374593b5 508 Pfam PF05193 Peptidase M16 inactive domain 230 413 5.0E-18 T 14-10-2018 IPR007863 Peptidase M16, C-terminal TMO_2888 a0ff05468441692bd21f3c36374593b5 508 Gene3D G3DSA:3.30.830.10 63 279 8.0E-75 T 14-10-2018 TMO_2888 a0ff05468441692bd21f3c36374593b5 508 SUPERFAMILY SSF63411 305 474 1.83E-23 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_2888 a0ff05468441692bd21f3c36374593b5 508 SUPERFAMILY SSF63411 65 273 1.83E-58 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_2888 a0ff05468441692bd21f3c36374593b5 508 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 96 119 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 TMO_2888 a0ff05468441692bd21f3c36374593b5 508 Pfam PF00675 Insulinase (Peptidase family M16) 76 221 3.5E-26 T 14-10-2018 IPR011765 Peptidase M16, N-terminal TMO_2888 a0ff05468441692bd21f3c36374593b5 508 Gene3D G3DSA:3.30.830.10 290 481 4.7E-30 T 14-10-2018 TMO_0867 d9fb9dbd4357acb5311423b9aa087b9f 163 Pfam PF17200 Single Cache domain 2 69 149 2.7E-10 T 14-10-2018 IPR033480 Single Cache domain 2 TMO_0867 d9fb9dbd4357acb5311423b9aa087b9f 163 Gene3D G3DSA:3.30.450.20 31 161 1.5E-17 T 14-10-2018 TMO_0867 d9fb9dbd4357acb5311423b9aa087b9f 163 SMART SM01049 30 111 0.002 T 14-10-2018 IPR033480 Single Cache domain 2 TMO_b0470 5a7313862c09717b9ab0099ca91d85d9 442 Gene3D G3DSA:3.50.50.60 36 388 4.3E-67 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0470 5a7313862c09717b9ab0099ca91d85d9 442 Pfam PF01266 FAD dependent oxidoreductase 36 388 3.3E-48 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_b0470 5a7313862c09717b9ab0099ca91d85d9 442 Gene3D G3DSA:3.30.9.10 129 352 4.3E-67 T 14-10-2018 TMO_b0470 5a7313862c09717b9ab0099ca91d85d9 442 SUPERFAMILY SSF51905 35 411 1.42E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0132 03470367e307f6b23e5ffdcf5e0b8867 252 Gene3D G3DSA:3.10.20.30 3 85 1.4E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_c0132 03470367e307f6b23e5ffdcf5e0b8867 252 Pfam PF02597 ThiS family 5 85 1.1E-16 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 TMO_c0132 03470367e307f6b23e5ffdcf5e0b8867 252 SUPERFAMILY SSF54690 97 241 8.76E-50 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 TMO_c0132 03470367e307f6b23e5ffdcf5e0b8867 252 SUPERFAMILY SSF54285 1 83 1.61E-18 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp TMO_c0132 03470367e307f6b23e5ffdcf5e0b8867 252 Pfam PF02391 MoaE protein 100 212 4.6E-34 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 TMO_c0132 03470367e307f6b23e5ffdcf5e0b8867 252 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 4 85 2.8E-20 T 14-10-2018 TMO_c0132 03470367e307f6b23e5ffdcf5e0b8867 252 Gene3D G3DSA:3.90.1170.40 93 241 2.1E-49 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 TMO_2059 7fad6746168b8de2f79d20b6c39d70a1 282 Pfam PF00486 Transcriptional regulatory protein, C terminal 184 265 1.2E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_2059 7fad6746168b8de2f79d20b6c39d70a1 282 Pfam PF00072 Response regulator receiver domain 20 130 2.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2059 7fad6746168b8de2f79d20b6c39d70a1 282 Gene3D G3DSA:3.40.50.2300 16 152 8.9E-30 T 14-10-2018 TMO_2059 7fad6746168b8de2f79d20b6c39d70a1 282 Gene3D G3DSA:1.10.10.10 158 268 3.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2059 7fad6746168b8de2f79d20b6c39d70a1 282 SUPERFAMILY SSF46894 166 266 6.8E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_2059 7fad6746168b8de2f79d20b6c39d70a1 282 SMART SM00448 18 130 9.6E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2059 7fad6746168b8de2f79d20b6c39d70a1 282 SUPERFAMILY SSF52172 16 148 9.25E-31 T 14-10-2018 IPR011006 CheY-like superfamily TMO_2059 7fad6746168b8de2f79d20b6c39d70a1 282 SMART SM00862 184 266 7.9E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_c0633 ab33378d60350c3d254fc35caeb03f1a 506 Pfam PF00982 Glycosyltransferase family 20 6 491 7.8E-138 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 TMO_c0633 ab33378d60350c3d254fc35caeb03f1a 506 SUPERFAMILY SSF53756 5 493 6.28E-133 T 14-10-2018 TMO_c0633 ab33378d60350c3d254fc35caeb03f1a 506 Gene3D G3DSA:3.40.50.2000 33 486 2.9E-143 T 14-10-2018 TMO_c0633 ab33378d60350c3d254fc35caeb03f1a 506 TIGRFAM TIGR02398 gluc_glyc_Psyn: glucosylglycerol-phosphate synthase 10 492 5.3E-206 T 14-10-2018 IPR012764 Glucosylglycerol-phosphate synthase GO:0016758|GO:0051473 MetaCyc: PWY-7902 TMO_c0633 ab33378d60350c3d254fc35caeb03f1a 506 Gene3D G3DSA:3.40.50.2000 270 477 2.9E-143 T 14-10-2018 TMO_0242 6a999f8787be0151c0a28563e50b41d3 329 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 272 6.1E-88 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 TMO_0242 6a999f8787be0151c0a28563e50b41d3 329 PIRSF PIRSF006470 1 328 2.2E-133 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 TMO_0242 6a999f8787be0151c0a28563e50b41d3 329 Gene3D G3DSA:3.40.190.170 24 325 6.1E-100 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_0242 6a999f8787be0151c0a28563e50b41d3 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 311 9.8E-110 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_0242 6a999f8787be0151c0a28563e50b41d3 329 SUPERFAMILY SSF53850 47 255 7.11E-5 T 14-10-2018 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 Gene3D G3DSA:3.40.50.720 396 697 9.2E-113 T 14-10-2018 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 SUPERFAMILY SSF51971 354 538 3.83E-41 T 14-10-2018 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 398 417 1.5E-12 T 14-10-2018 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 520 538 1.5E-12 T 14-10-2018 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 480 498 1.5E-12 T 14-10-2018 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 397 419 6.8E-5 T 14-10-2018 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 650 664 6.8E-5 T 14-10-2018 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 28 352 3.1E-83 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 Gene3D G3DSA:3.50.50.60 492 656 9.2E-113 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 SUPERFAMILY SSF51395 20 380 9.02E-110 T 14-10-2018 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 Gene3D G3DSA:3.20.20.70 23 390 5.3E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 397 675 4.3E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_b0591 bb0c4a01311863ba14dd84bd3d076542 703 SUPERFAMILY SSF51905 483 681 5.94E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2851 cb101520e41bec162d0fb64f9beae09e 425 Gene3D G3DSA:3.30.499.20 4 270 1.0E-57 T 14-10-2018 TMO_2851 cb101520e41bec162d0fb64f9beae09e 425 SUPERFAMILY SSF53732 1 418 1.96E-85 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TMO_2851 cb101520e41bec162d0fb64f9beae09e 425 Gene3D G3DSA:3.30.499.10 273 424 1.5E-41 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TMO_2851 cb101520e41bec162d0fb64f9beae09e 425 Pfam PF00330 Aconitase family (aconitate hydratase) 80 410 3.0E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TMO_b0089 094b9d8b436221550fa5e606c33c09e0 269 Gene3D G3DSA:3.40.190.10 118 220 6.7E-53 T 14-10-2018 TMO_b0089 094b9d8b436221550fa5e606c33c09e0 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 256 5.5E-49 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_b0089 094b9d8b436221550fa5e606c33c09e0 269 Gene3D G3DSA:3.40.190.10 32 254 6.7E-53 T 14-10-2018 TMO_b0089 094b9d8b436221550fa5e606c33c09e0 269 SMART SM00062 34 258 2.8E-41 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_b0089 094b9d8b436221550fa5e606c33c09e0 269 SUPERFAMILY SSF53850 6 257 2.93E-57 T 14-10-2018 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 PIRSF PIRSF000102 1 313 2.0E-105 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 Gene3D G3DSA:3.90.110.10 147 314 6.0E-68 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 8.0E-42 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 Gene3D G3DSA:3.40.50.720 1 145 5.0E-57 T 14-10-2018 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 SUPERFAMILY SSF51735 5 144 3.96E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3009 09942092deb2c0368ee58807d7504ec3 314 SUPERFAMILY SSF56327 144 311 7.78E-58 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 308 2.5E-131 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 6.5E-30 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 6.5E-30 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 6.5E-30 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 6.5E-30 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 6.5E-30 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 Hamap MF_00487 Malate dehydrogenase [mdh]. 3 313 46.491 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 TMO_3009 09942092deb2c0368ee58807d7504ec3 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 308 6.7E-31 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 TMO_c0461 8c2fa9cef5bf20815288d78535ce22f4 250 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0461 8c2fa9cef5bf20815288d78535ce22f4 250 Pfam PF00005 ABC transporter 26 176 2.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0461 8c2fa9cef5bf20815288d78535ce22f4 250 SUPERFAMILY SSF52540 10 243 4.31E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0461 8c2fa9cef5bf20815288d78535ce22f4 250 SMART SM00382 35 224 2.0E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0461 8c2fa9cef5bf20815288d78535ce22f4 250 Gene3D G3DSA:3.40.50.300 9 249 2.6E-76 T 14-10-2018 TMO_c0461 8c2fa9cef5bf20815288d78535ce22f4 250 PIRSF PIRSF039085 7 249 2.3E-99 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TMO_2576 87361a502d65b747427d914968f2536e 200 Gene3D G3DSA:3.40.30.10 4 198 8.9E-57 T 14-10-2018 TMO_2576 87361a502d65b747427d914968f2536e 200 Pfam PF01323 DSBA-like thioredoxin domain 5 193 1.4E-32 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TMO_2576 87361a502d65b747427d914968f2536e 200 PIRSF PIRSF006386 1 200 5.7E-51 T 14-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TMO_2576 87361a502d65b747427d914968f2536e 200 SUPERFAMILY SSF52833 5 196 2.43E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_0478 b5a84eea5606e8e01f83c476d44c3c5f 305 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 16 298 2.9E-79 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 TMO_0478 b5a84eea5606e8e01f83c476d44c3c5f 305 Gene3D G3DSA:3.40.50.620 11 189 1.3E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_0478 b5a84eea5606e8e01f83c476d44c3c5f 305 SUPERFAMILY SSF52374 14 299 7.7E-98 T 14-10-2018 TMO_0478 b5a84eea5606e8e01f83c476d44c3c5f 305 Hamap MF_00158 Pantothenate synthetase [panC]. 15 299 38.152 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 TMO_0478 b5a84eea5606e8e01f83c476d44c3c5f 305 Pfam PF02569 Pantoate-beta-alanine ligase 16 297 1.7E-91 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 TMO_0478 b5a84eea5606e8e01f83c476d44c3c5f 305 Gene3D G3DSA:3.30.1300.10 190 305 4.7E-25 T 14-10-2018 TMO_0478 b5a84eea5606e8e01f83c476d44c3c5f 305 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 37 94 3.6E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_1725 cf033c227dd5c22b3cf18cb5aa7f61fb 267 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 26 267 9.3E-115 T 14-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD TMO_1725 cf033c227dd5c22b3cf18cb5aa7f61fb 267 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 245 266 1.1E-5 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_1725 cf033c227dd5c22b3cf18cb5aa7f61fb 267 Gene3D G3DSA:3.40.50.300 23 267 3.0E-52 T 14-10-2018 TMO_1725 cf033c227dd5c22b3cf18cb5aa7f61fb 267 SMART SM00382 51 243 0.0043 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1725 cf033c227dd5c22b3cf18cb5aa7f61fb 267 Pfam PF00005 ABC transporter 42 196 1.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1725 cf033c227dd5c22b3cf18cb5aa7f61fb 267 SUPERFAMILY SSF52540 27 265 2.13E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0071 5affce6b86c2e7f8b07e3d43b6066416 309 Pfam PF13557 Putative MetA-pathway of phenol degradation 55 207 1.4E-5 T 14-10-2018 IPR025737 MetA-pathway of phenol degradation, putative TMO_b0071 5affce6b86c2e7f8b07e3d43b6066416 309 SUPERFAMILY SSF56925 168 297 6.28E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TMO_2244 ed3e735fc2a1215db48c556db3fa0002 88 SUPERFAMILY SSF47240 12 85 1.44E-5 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_2244 ed3e735fc2a1215db48c556db3fa0002 88 Gene3D G3DSA:1.20.1260.10 28 88 6.8E-20 T 14-10-2018 IPR012347 Ferritin-like TMO_2244 ed3e735fc2a1215db48c556db3fa0002 88 Pfam PF03713 Domain of unknown function (DUF305) 31 85 9.4E-19 T 14-10-2018 IPR005183 Domain of unknown function DUF305 TMO_2817 02835b2505798e77b1cb949f35cbb51d 320 Pfam PF16868 NMT1-like family 32 318 1.2E-80 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_2817 02835b2505798e77b1cb949f35cbb51d 320 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 6 318 1.7E-93 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_2817 02835b2505798e77b1cb949f35cbb51d 320 Gene3D G3DSA:3.40.190.10 32 318 7.2E-93 T 14-10-2018 TMO_2817 02835b2505798e77b1cb949f35cbb51d 320 SUPERFAMILY SSF53850 30 320 5.85E-73 T 14-10-2018 TMO_2817 02835b2505798e77b1cb949f35cbb51d 320 Gene3D G3DSA:3.40.190.10 117 255 7.2E-93 T 14-10-2018 TMO_a0367 c2d616837a6d613b06df6ab7cab07892 754 Pfam PF03787 RAMP superfamily 88 618 4.2E-6 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein TMO_a0367 c2d616837a6d613b06df6ab7cab07892 754 TIGRFAM TIGR03986 TIGR03986: CRISPR-associated protein 12 647 4.1E-61 T 14-10-2018 IPR023825 CRISPR-associated RAMP BGP1436 TMO_3086 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 SMART SM00382 32 230 7.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3086 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3086 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 Gene3D G3DSA:3.40.50.300 4 257 6.5E-76 T 14-10-2018 TMO_3086 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 Pfam PF00005 ABC transporter 24 182 1.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3086 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 SUPERFAMILY SSF52540 8 252 3.43E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3086 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 PIRSF PIRSF039085 4 258 6.2E-117 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TMO_c0840 0dd478f75a34218227a70b9999565c4e 487 Gene3D G3DSA:2.120.10.30 182 312 1.8E-22 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TMO_c0840 0dd478f75a34218227a70b9999565c4e 487 Pfam PF01436 NHL repeat 448 473 9.5E-6 T 14-10-2018 IPR001258 NHL repeat GO:0005515 TMO_c0840 0dd478f75a34218227a70b9999565c4e 487 Pfam PF00578 AhpC/TSA family 17 122 1.4E-5 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_c0840 0dd478f75a34218227a70b9999565c4e 487 SUPERFAMILY SSF101898 189 475 6.8E-40 T 14-10-2018 TMO_c0840 0dd478f75a34218227a70b9999565c4e 487 Gene3D G3DSA:3.40.30.10 3 157 1.7E-30 T 14-10-2018 TMO_c0840 0dd478f75a34218227a70b9999565c4e 487 SUPERFAMILY SSF52833 12 143 3.39E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0840 0dd478f75a34218227a70b9999565c4e 487 Gene3D G3DSA:2.120.10.30 316 427 3.4E-19 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TMO_c0840 0dd478f75a34218227a70b9999565c4e 487 Gene3D G3DSA:2.120.10.30 444 486 1.7E-5 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 186 5.0E-18 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 Hamap MF_00942 Endonuclease III [nth]. 14 227 36.432 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 SMART SM00478 56 203 5.9E-50 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 205 221 4.0E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 ProSitePatterns PS01155 Endonuclease III family signature. 120 149 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 SMART SM00525 204 224 5.2E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 TIGRFAM TIGR01083 nth: endonuclease III 23 212 1.8E-78 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 Gene3D G3DSA:1.10.340.30 39 150 1.3E-72 T 14-10-2018 TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 Pfam PF00633 Helix-hairpin-helix motif 118 145 5.7E-8 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 SUPERFAMILY SSF48150 20 226 8.95E-70 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 PIRSF PIRSF001435 18 228 1.5E-46 T 14-10-2018 TMO_3448 13ba8d0da755da42c5212a1966f8d808 243 Gene3D G3DSA:1.10.1670.10 29 221 1.3E-72 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 SUPERFAMILY SSF47203 225 379 1.77E-59 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.9E-32 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 2.1E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 SUPERFAMILY SSF56645 2 240 3.53E-85 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 Gene3D G3DSA:2.40.110.10 120 230 1.3E-44 T 14-10-2018 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 7.7E-50 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 Gene3D G3DSA:1.20.140.10 231 378 1.5E-54 T 14-10-2018 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 PIRSF PIRSF016578 4 190 3.6E-8 T 14-10-2018 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 PIRSF PIRSF016578 231 381 4.4E-15 T 14-10-2018 TMO_1372 ffb9bd11068fa01a09b1a87550fada24 383 Gene3D G3DSA:1.10.540.10 1 119 4.1E-38 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_c0372 8822be477cddde2b6b1dfac0715851dd 270 Gene3D G3DSA:3.40.50.1820 22 225 1.6E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0372 8822be477cddde2b6b1dfac0715851dd 270 SUPERFAMILY SSF53474 13 218 1.74E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0372 8822be477cddde2b6b1dfac0715851dd 270 Pfam PF01738 Dienelactone hydrolase family 32 146 4.7E-9 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 TMO_2095 e1db85c6fa28a5b8eaf66ac258a644ee 197 SMART SM00072 19 195 2.9E-5 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit TMO_2095 e1db85c6fa28a5b8eaf66ac258a644ee 197 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 19 196 33.364 T 14-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_2095 e1db85c6fa28a5b8eaf66ac258a644ee 197 Gene3D G3DSA:3.40.50.300 24 193 8.2E-19 T 14-10-2018 TMO_2095 e1db85c6fa28a5b8eaf66ac258a644ee 197 Pfam PF13671 AAA domain 22 158 1.7E-10 T 14-10-2018 TMO_2095 e1db85c6fa28a5b8eaf66ac258a644ee 197 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 20 195 1.3E-59 T 14-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_2095 e1db85c6fa28a5b8eaf66ac258a644ee 197 SUPERFAMILY SSF52540 20 195 5.53E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2095 e1db85c6fa28a5b8eaf66ac258a644ee 197 Gene3D G3DSA:3.30.63.10 54 109 8.2E-19 T 14-10-2018 TMO_3052 b5b02090190d372ccff745a845c29b2b 144 Gene3D G3DSA:3.10.129.10 2 141 2.1E-38 T 14-10-2018 TMO_3052 b5b02090190d372ccff745a845c29b2b 144 SUPERFAMILY SSF54637 18 141 2.69E-26 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_3052 b5b02090190d372ccff745a845c29b2b 144 Pfam PF03061 Thioesterase superfamily 55 128 5.8E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_0689 933589b4288c8eea3023643f70de2e15 513 Gene3D G3DSA:3.30.300.310 409 512 1.1E-27 T 14-10-2018 TMO_0689 933589b4288c8eea3023643f70de2e15 513 Pfam PF00501 AMP-binding enzyme 24 413 1.9E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0689 933589b4288c8eea3023643f70de2e15 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0689 933589b4288c8eea3023643f70de2e15 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 423 497 7.3E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0689 933589b4288c8eea3023643f70de2e15 513 SUPERFAMILY SSF56801 13 509 4.97E-131 T 14-10-2018 TMO_0689 933589b4288c8eea3023643f70de2e15 513 Gene3D G3DSA:3.40.50.12780 17 408 5.9E-92 T 14-10-2018 TMO_b0526 d4e39c49003c176a2406d366d7ec701a 405 Pfam PF00144 Beta-lactamase 37 384 6.1E-62 T 14-10-2018 IPR001466 Beta-lactamase-related TMO_b0526 d4e39c49003c176a2406d366d7ec701a 405 Gene3D G3DSA:3.40.710.30 22 405 2.9E-122 T 14-10-2018 TMO_b0526 d4e39c49003c176a2406d366d7ec701a 405 SUPERFAMILY SSF56601 25 399 1.08E-67 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_1772 1d2040cfb096eb6ce342dcd6376c72ab 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 14 337 34.222 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 TMO_1772 1d2040cfb096eb6ce342dcd6376c72ab 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 155 3.8E-9 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_1772 1d2040cfb096eb6ce342dcd6376c72ab 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 234 269 3.7E-9 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_1772 1d2040cfb096eb6ce342dcd6376c72ab 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 36 99 1.1E-18 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 TMO_1772 1d2040cfb096eb6ce342dcd6376c72ab 343 Gene3D G3DSA:3.40.1390.10 7 109 4.5E-20 T 14-10-2018 TMO_1772 1d2040cfb096eb6ce342dcd6376c72ab 343 SUPERFAMILY SSF51161 44 327 5.37E-75 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_1772 1d2040cfb096eb6ce342dcd6376c72ab 343 Gene3D G3DSA:2.160.10.10 111 320 1.4E-57 T 14-10-2018 TMO_1772 1d2040cfb096eb6ce342dcd6376c72ab 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 158 189 2.4E-7 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_1772 1d2040cfb096eb6ce342dcd6376c72ab 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 17 340 2.1E-103 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 TMO_a0308 33cd83b6a0badbc25e3808292e481db5 108 Pfam PF11154 Protein of unknown function (DUF2934) 13 47 1.3E-9 T 14-10-2018 IPR021327 Protein of unknown function DUF2934 TMO_c0020 a9d016e57723104e11c106cbeca7bb4b 100 Gene3D G3DSA:1.10.10.10 1 99 9.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0020 a9d016e57723104e11c106cbeca7bb4b 100 Pfam PF03551 Transcriptional regulator PadR-like family 15 83 1.7E-20 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal TMO_c0020 a9d016e57723104e11c106cbeca7bb4b 100 SUPERFAMILY SSF46785 3 97 1.84E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 Gene3D G3DSA:3.30.565.10 288 448 1.2E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 444 3.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 SMART SM00388 221 284 3.0E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 SMART SM00304 165 220 6.2E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 SUPERFAMILY SSF158472 165 218 1.11E-8 T 14-10-2018 TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 SUPERFAMILY SSF47384 204 284 4.32E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 Pfam PF00672 HAMP domain 165 216 1.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 Gene3D G3DSA:1.10.287.130 169 285 2.8E-27 T 14-10-2018 TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 283 1.9E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 SMART SM00387 335 447 2.2E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2357 cbed8f949c6d879747e11d2bc5cd3555 449 SUPERFAMILY SSF55874 274 445 3.93E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0047 7cb63164344699c038222eba9be93be3 646 SUPERFAMILY SSF52402 223 582 3.84E-23 T 14-10-2018 TMO_a0047 7cb63164344699c038222eba9be93be3 646 Gene3D G3DSA:3.60.20.10 45 219 6.3E-20 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_a0047 7cb63164344699c038222eba9be93be3 646 Pfam PF00733 Asparagine synthase 237 614 1.9E-23 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_a0047 7cb63164344699c038222eba9be93be3 646 SUPERFAMILY SSF56235 24 221 1.35E-21 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_a0047 7cb63164344699c038222eba9be93be3 646 Gene3D G3DSA:3.40.50.620 472 594 7.6E-7 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_a0047 7cb63164344699c038222eba9be93be3 646 Gene3D G3DSA:3.40.50.620 225 408 1.9E-13 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_a0047 7cb63164344699c038222eba9be93be3 646 Pfam PF13537 Glutamine amidotransferase domain 67 161 3.3E-8 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TMO_a0047 7cb63164344699c038222eba9be93be3 646 PIRSF PIRSF001589 451 625 5.4E-4 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_a0047 7cb63164344699c038222eba9be93be3 646 PIRSF PIRSF001589 63 326 4.4E-28 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_2722 ab8645dfb1ea24c007dd5b1720d1eb63 563 SMART SM00880 239 551 4.7E-65 T 14-10-2018 IPR007899 CHAD domain TMO_2722 ab8645dfb1ea24c007dd5b1720d1eb63 563 Gene3D G3DSA:2.40.320.10 2 205 7.4E-13 T 14-10-2018 TMO_2722 ab8645dfb1ea24c007dd5b1720d1eb63 563 SUPERFAMILY SSF55154 8 213 3.71E-19 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 TMO_2722 ab8645dfb1ea24c007dd5b1720d1eb63 563 Pfam PF05235 CHAD domain 240 516 1.0E-49 T 14-10-2018 IPR007899 CHAD domain TMO_2722 ab8645dfb1ea24c007dd5b1720d1eb63 563 Pfam PF01928 CYTH domain 8 178 2.4E-8 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 TMO_2722 ab8645dfb1ea24c007dd5b1720d1eb63 563 Gene3D G3DSA:1.40.20.10 217 560 1.0E-66 T 14-10-2018 IPR038186 CHAD domain superfamily TMO_2722 ab8645dfb1ea24c007dd5b1720d1eb63 563 SMART SM01118 3 210 2.9E-7 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 TMO_1238 6d9f5751db430add9f813bc6f87f94bc 261 SUPERFAMILY SSF52540 19 259 8.2E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1238 6d9f5751db430add9f813bc6f87f94bc 261 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 21 238 1.9E-16 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TMO_1238 6d9f5751db430add9f813bc6f87f94bc 261 Gene3D G3DSA:3.40.50.300 18 261 1.2E-48 T 14-10-2018 TMO_1238 6d9f5751db430add9f813bc6f87f94bc 261 PIRSF PIRSF003092 4 260 7.1E-58 T 14-10-2018 IPR025501 ATP binding protein MinD TMO_c0462 ed04881f63b3efc7cb1ef5b718d602d3 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 2.2E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_c0462 ed04881f63b3efc7cb1ef5b718d602d3 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 212 6.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0462 ed04881f63b3efc7cb1ef5b718d602d3 216 SUPERFAMILY SSF161098 13 198 2.09E-38 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0462 ed04881f63b3efc7cb1ef5b718d602d3 216 Gene3D G3DSA:1.10.3720.10 6 214 2.8E-45 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0642 48da53e5c1dba8af3d36b3a02de9f63f 358 SUPERFAMILY SSF46689 287 336 1.47E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0642 48da53e5c1dba8af3d36b3a02de9f63f 358 Gene3D G3DSA:1.10.10.60 231 337 7.0E-25 T 14-10-2018 TMO_c0642 48da53e5c1dba8af3d36b3a02de9f63f 358 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 318 8.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_c0642 48da53e5c1dba8af3d36b3a02de9f63f 358 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 318 334 8.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_c0642 48da53e5c1dba8af3d36b3a02de9f63f 358 SMART SM00342 252 334 7.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0642 48da53e5c1dba8af3d36b3a02de9f63f 358 Pfam PF12833 Helix-turn-helix domain 258 335 4.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0642 48da53e5c1dba8af3d36b3a02de9f63f 358 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 34 203 1.1E-34 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal TMO_b0361 46bc180895fb7b809b670955058f3ae4 405 SUPERFAMILY SSF47203 244 400 2.58E-44 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_b0361 46bc180895fb7b809b670955058f3ae4 405 Gene3D G3DSA:1.10.540.10 1 130 8.1E-53 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_b0361 46bc180895fb7b809b670955058f3ae4 405 SUPERFAMILY SSF56645 6 259 1.06E-66 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_b0361 46bc180895fb7b809b670955058f3ae4 405 Gene3D G3DSA:1.20.140.10 247 404 3.4E-40 T 14-10-2018 TMO_b0361 46bc180895fb7b809b670955058f3ae4 405 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 246 394 1.3E-37 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_b0361 46bc180895fb7b809b670955058f3ae4 405 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 234 5.0E-20 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_b0361 46bc180895fb7b809b670955058f3ae4 405 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 127 4.4E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_b0361 46bc180895fb7b809b670955058f3ae4 405 Gene3D G3DSA:2.40.110.10 131 246 8.8E-49 T 14-10-2018 TMO_a0133 4a5c380cf71144e434bd6982ffbfde0d 476 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 436 4.1E-143 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 TMO_a0133 4a5c380cf71144e434bd6982ffbfde0d 476 SUPERFAMILY SSF51679 7 442 6.62E-105 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 TMO_a0133 4a5c380cf71144e434bd6982ffbfde0d 476 Gene3D G3DSA:3.20.20.30 5 459 4.0E-123 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 TMO_a0133 4a5c380cf71144e434bd6982ffbfde0d 476 Pfam PF00296 Luciferase-like monooxygenase 30 394 7.7E-43 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 TMO_a0133 4a5c380cf71144e434bd6982ffbfde0d 476 PIRSF PIRSF000337 4 450 1.9E-124 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 TMO_c0399 696d7c34a0743ca1a321af493fcb5867 320 SUPERFAMILY SSF52283 60 118 7.29E-11 T 14-10-2018 TMO_c0399 696d7c34a0743ca1a321af493fcb5867 320 Gene3D G3DSA:3.40.50.720 52 311 4.2E-80 T 14-10-2018 TMO_c0399 696d7c34a0743ca1a321af493fcb5867 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 310 2.7E-7 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TMO_c0399 696d7c34a0743ca1a321af493fcb5867 320 Gene3D G3DSA:3.40.50.720 100 290 4.2E-80 T 14-10-2018 TMO_c0399 696d7c34a0743ca1a321af493fcb5867 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 283 1.3E-52 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_c0399 696d7c34a0743ca1a321af493fcb5867 320 SUPERFAMILY SSF51735 101 283 4.09E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1350 4795b8096cdb62d9dc43277ebb3240f4 298 Gene3D G3DSA:2.60.120.10 159 268 6.1E-98 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_1350 4795b8096cdb62d9dc43277ebb3240f4 298 Pfam PF05726 Pirin C-terminal cupin domain 193 298 2.1E-29 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 TMO_1350 4795b8096cdb62d9dc43277ebb3240f4 298 SUPERFAMILY SSF51182 20 298 7.01E-91 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_1350 4795b8096cdb62d9dc43277ebb3240f4 298 PIRSF PIRSF006232 18 298 3.4E-97 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 TMO_1350 4795b8096cdb62d9dc43277ebb3240f4 298 Gene3D G3DSA:2.60.120.10 33 294 6.1E-98 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_1350 4795b8096cdb62d9dc43277ebb3240f4 298 Pfam PF02678 Pirin 37 137 7.4E-36 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 TMO_b0362 b3beee6830f95d34c177ce4d8c86edb9 317 Gene3D G3DSA:3.40.50.300 117 184 1.4E-12 T 14-10-2018 TMO_b0362 b3beee6830f95d34c177ce4d8c86edb9 317 SUPERFAMILY SSF53795 119 167 9.16E-13 T 14-10-2018 TMO_1631 ccbe75f412e00297351e38ecfdb4baf0 505 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_1631 ccbe75f412e00297351e38ecfdb4baf0 505 Gene3D G3DSA:3.30.300.30 407 504 1.0E-23 T 14-10-2018 TMO_1631 ccbe75f412e00297351e38ecfdb4baf0 505 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 496 1.2E-13 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_1631 ccbe75f412e00297351e38ecfdb4baf0 505 Pfam PF00501 AMP-binding enzyme 15 409 5.6E-76 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_1631 ccbe75f412e00297351e38ecfdb4baf0 505 Gene3D G3DSA:3.40.50.12780 2 406 6.8E-97 T 14-10-2018 TMO_1631 ccbe75f412e00297351e38ecfdb4baf0 505 SUPERFAMILY SSF56801 5 502 1.31E-126 T 14-10-2018 TMO_0940 ec792ad96239b12f27f6205e858288f1 505 Pfam PF00501 AMP-binding enzyme 17 404 1.5E-99 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0940 ec792ad96239b12f27f6205e858288f1 505 SUPERFAMILY SSF56801 4 501 1.19E-144 T 14-10-2018 TMO_0940 ec792ad96239b12f27f6205e858288f1 505 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0940 ec792ad96239b12f27f6205e858288f1 505 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 489 1.1E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0940 ec792ad96239b12f27f6205e858288f1 505 Gene3D G3DSA:3.40.50.12780 7 397 9.6E-134 T 14-10-2018 TMO_0940 ec792ad96239b12f27f6205e858288f1 505 Gene3D G3DSA:3.30.300.310 400 502 2.6E-28 T 14-10-2018 TMO_c0129 6c5d12cae6b940ac1c866359c80e0833 135 TIGRFAM TIGR00526 folB_dom: FolB domain 21 134 2.1E-14 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 TMO_c0129 6c5d12cae6b940ac1c866359c80e0833 135 Pfam PF02152 Dihydroneopterin aldolase 22 131 6.6E-23 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 TMO_c0129 6c5d12cae6b940ac1c866359c80e0833 135 SUPERFAMILY SSF55620 19 134 1.78E-24 T 14-10-2018 TMO_c0129 6c5d12cae6b940ac1c866359c80e0833 135 SMART SM00905 22 132 5.0E-27 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 TMO_c0129 6c5d12cae6b940ac1c866359c80e0833 135 Gene3D G3DSA:3.30.1130.10 4 135 4.1E-43 T 14-10-2018 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 SUPERFAMILY SSF55785 41 140 8.03E-14 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 SMART SM00086 231 273 0.023 T 14-10-2018 IPR001610 PAC motif TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 SMART SM00086 97 139 2.2E-4 T 14-10-2018 IPR001610 PAC motif TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 Gene3D G3DSA:1.10.287.950 269 497 1.8E-42 T 14-10-2018 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 176 278 3.3E-6 T 14-10-2018 IPR000014 PAS domain TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 Pfam PF08447 PAS fold 40 131 9.7E-17 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 Pfam PF08447 PAS fold 174 265 1.3E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 448 477 7.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 371 398 7.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 7.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 293 322 7.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 SUPERFAMILY SSF55785 176 275 5.06E-14 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 SMART SM00283 297 496 6.9E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 489 4.8E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 SUPERFAMILY SSF58104 274 493 2.35E-49 T 14-10-2018 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 Gene3D G3DSA:3.30.450.20 7 135 5.2E-19 T 14-10-2018 TMO_c0460 c515aa19bfae18328d1a62a14993ce34 498 Gene3D G3DSA:3.30.450.20 141 268 3.1E-20 T 14-10-2018 TMO_c0260 023f70aa1c09e0fbe38747b30be40518 195 Pfam PF13463 Winged helix DNA-binding domain 78 142 2.1E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0260 023f70aa1c09e0fbe38747b30be40518 195 SUPERFAMILY SSF46785 49 186 7.55E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0260 023f70aa1c09e0fbe38747b30be40518 195 PIRSF PIRSF036158 2 195 2.0E-70 T 14-10-2018 IPR014601 Transcriptional regulator with MarR-type HTH domain TMO_c0260 023f70aa1c09e0fbe38747b30be40518 195 Gene3D G3DSA:1.10.10.10 52 184 6.3E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1943 d6d5e707700867f2aaeadd2fa25b5197 442 Pfam PF01842 ACT domain 362 427 8.0E-10 T 14-10-2018 IPR002912 ACT domain TMO_1943 d6d5e707700867f2aaeadd2fa25b5197 442 PIRSF PIRSF000098 13 441 6.3E-154 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 TMO_1943 d6d5e707700867f2aaeadd2fa25b5197 442 SUPERFAMILY SSF55021 353 431 4.25E-10 T 14-10-2018 TMO_1943 d6d5e707700867f2aaeadd2fa25b5197 442 SUPERFAMILY SSF51735 15 153 8.41E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1943 d6d5e707700867f2aaeadd2fa25b5197 442 SUPERFAMILY SSF55347 150 315 2.68E-53 T 14-10-2018 TMO_1943 d6d5e707700867f2aaeadd2fa25b5197 442 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 22 142 1.1E-12 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 TMO_1943 d6d5e707700867f2aaeadd2fa25b5197 442 Pfam PF00742 Homoserine dehydrogenase 150 328 2.9E-64 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 TMO_1943 d6d5e707700867f2aaeadd2fa25b5197 442 Gene3D G3DSA:3.40.50.720 16 352 2.0E-152 T 14-10-2018 TMO_1943 d6d5e707700867f2aaeadd2fa25b5197 442 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 196 218 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 TMO_1943 d6d5e707700867f2aaeadd2fa25b5197 442 Gene3D G3DSA:3.30.70.260 356 429 2.0E-152 T 14-10-2018 TMO_1943 d6d5e707700867f2aaeadd2fa25b5197 442 Gene3D G3DSA:3.30.360.10 149 355 2.0E-152 T 14-10-2018 TMO_3533 47e65ea737b4cdd6dcb180c1de37c4d1 219 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 173 183 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site TMO_3533 47e65ea737b4cdd6dcb180c1de37c4d1 219 SUPERFAMILY SSF55486 73 209 8.55E-38 T 14-10-2018 TMO_3533 47e65ea737b4cdd6dcb180c1de37c4d1 219 Pfam PF02130 Uncharacterized protein family UPF0054 79 201 5.2E-32 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TMO_3533 47e65ea737b4cdd6dcb180c1de37c4d1 219 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 27 207 21.869 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TMO_3533 47e65ea737b4cdd6dcb180c1de37c4d1 219 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 84 203 7.7E-33 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TMO_3533 47e65ea737b4cdd6dcb180c1de37c4d1 219 Gene3D G3DSA:3.40.390.30 60 212 3.4E-42 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 TMO_0964 3501ea94d57a440d19e48cbaf3f6b971 85 Gene3D G3DSA:1.10.287.1040 10 85 3.8E-21 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 TMO_0964 3501ea94d57a440d19e48cbaf3f6b971 85 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 15 75 15.512 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TMO_0964 3501ea94d57a440d19e48cbaf3f6b971 85 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 15 55 2.0E-9 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TMO_0964 3501ea94d57a440d19e48cbaf3f6b971 85 Pfam PF02609 Exonuclease VII small subunit 16 66 1.8E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TMO_0964 3501ea94d57a440d19e48cbaf3f6b971 85 SUPERFAMILY SSF116842 9 72 7.98E-20 T 14-10-2018 TMO_0964 3501ea94d57a440d19e48cbaf3f6b971 85 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 68 2.0E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TMO_2259 c4afc79c7b96704594ad8d0d256ad3b0 245 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 18 241 9.0E-93 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TMO_2259 c4afc79c7b96704594ad8d0d256ad3b0 245 SUPERFAMILY SSF52317 15 241 2.64E-75 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_2259 c4afc79c7b96704594ad8d0d256ad3b0 245 SMART SM01211 16 244 9.7E-127 T 14-10-2018 TMO_2259 c4afc79c7b96704594ad8d0d256ad3b0 245 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 17 242 42.301 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TMO_2259 c4afc79c7b96704594ad8d0d256ad3b0 245 Gene3D G3DSA:3.40.50.880 17 243 1.5E-65 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_2259 c4afc79c7b96704594ad8d0d256ad3b0 245 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 19 225 3.0E-40 T 14-10-2018 TMO_2259 c4afc79c7b96704594ad8d0d256ad3b0 245 PIRSF PIRSF001586 15 245 3.6E-83 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TMO_a0391 e71be8062c3ff04abb45b5a590b913b8 254 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 1 254 41.529 T 14-10-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 TMO_a0391 e71be8062c3ff04abb45b5a590b913b8 254 SUPERFAMILY SSF53335 13 207 6.93E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_a0391 e71be8062c3ff04abb45b5a590b913b8 254 Gene3D G3DSA:3.40.50.150 8 252 7.2E-91 T 14-10-2018 TMO_a0391 e71be8062c3ff04abb45b5a590b913b8 254 Gene3D G3DSA:1.10.150.290 131 235 7.2E-91 T 14-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 TMO_a0391 e71be8062c3ff04abb45b5a590b913b8 254 Pfam PF13649 Methyltransferase domain 35 123 3.0E-15 T 14-10-2018 TMO_1958 5fd1234b92e4cfaadd1939763025404a 293 Gene3D G3DSA:1.10.10.10 1 87 9.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1958 5fd1234b92e4cfaadd1939763025404a 293 Pfam PF03466 LysR substrate binding domain 91 283 6.6E-30 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1958 5fd1234b92e4cfaadd1939763025404a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1958 5fd1234b92e4cfaadd1939763025404a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1958 5fd1234b92e4cfaadd1939763025404a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1958 5fd1234b92e4cfaadd1939763025404a 293 SUPERFAMILY SSF53850 92 287 2.3E-29 T 14-10-2018 TMO_1958 5fd1234b92e4cfaadd1939763025404a 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1958 5fd1234b92e4cfaadd1939763025404a 293 Gene3D G3DSA:3.40.190.10 164 257 1.6E-56 T 14-10-2018 TMO_1958 5fd1234b92e4cfaadd1939763025404a 293 SUPERFAMILY SSF46785 6 113 7.12E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1958 5fd1234b92e4cfaadd1939763025404a 293 Gene3D G3DSA:3.40.190.10 98 262 1.6E-56 T 14-10-2018 TMO_0757 8e66b40c1a76b41568d871d8035b064d 292 Gene3D G3DSA:1.20.1480.50 166 230 7.4E-6 T 14-10-2018 TMO_0757 8e66b40c1a76b41568d871d8035b064d 292 SUPERFAMILY SSF55073 239 278 8.63E-6 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_0757 8e66b40c1a76b41568d871d8035b064d 292 Pfam PF00672 HAMP domain 173 222 5.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0757 8e66b40c1a76b41568d871d8035b064d 292 SMART SM00304 172 225 4.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0757 8e66b40c1a76b41568d871d8035b064d 292 Gene3D G3DSA:3.30.70.270 231 286 4.1E-8 T 14-10-2018 TMO_0757 8e66b40c1a76b41568d871d8035b064d 292 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 275 3.6E-6 T 14-10-2018 IPR000160 GGDEF domain TMO_0757 8e66b40c1a76b41568d871d8035b064d 292 SUPERFAMILY SSF158472 173 222 2.75E-7 T 14-10-2018 TMO_1353 507f1e9df9e04ef98d7d6b68c1831293 334 SUPERFAMILY SSF46689 275 323 2.82E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1353 507f1e9df9e04ef98d7d6b68c1831293 334 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 275 317 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_1353 507f1e9df9e04ef98d7d6b68c1831293 334 SUPERFAMILY SSF46689 221 271 1.25E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1353 507f1e9df9e04ef98d7d6b68c1831293 334 SMART SM00342 238 321 9.6E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_1353 507f1e9df9e04ef98d7d6b68c1831293 334 Gene3D G3DSA:1.10.10.60 217 325 1.4E-20 T 14-10-2018 TMO_1353 507f1e9df9e04ef98d7d6b68c1831293 334 Pfam PF12833 Helix-turn-helix domain 244 322 2.6E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0314 75eddbce174aead266168bcba81ac474 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 8 263 18.995 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TMO_0314 75eddbce174aead266168bcba81ac474 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 140 152 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TMO_0314 75eddbce174aead266168bcba81ac474 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 261 1.4E-67 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TMO_0314 75eddbce174aead266168bcba81ac474 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 11 257 2.1E-77 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TMO_b0098 9518665e618633618bf90b05ea27b93f 579 Gene3D G3DSA:3.40.190.10 82 460 7.6E-44 T 14-10-2018 TMO_b0098 9518665e618633618bf90b05ea27b93f 579 SUPERFAMILY SSF53850 63 511 4.86E-53 T 14-10-2018 TMO_b0098 9518665e618633618bf90b05ea27b93f 579 PIRSF PIRSF035859 1 577 0.0 T 14-10-2018 IPR014597 ABC transporter, periplasmic substrate-binding protein, predicted GO:0005215 TMO_b0098 9518665e618633618bf90b05ea27b93f 579 Gene3D G3DSA:3.40.190.10 185 503 7.6E-44 T 14-10-2018 TMO_c0455 e96775f10a3498bea58ff9d2070b4f33 338 TIGRFAM TIGR01274 ACC_deam: 1-aminocyclopropane-1-carboxylate deaminase 3 337 3.5E-173 T 14-10-2018 IPR005965 1-aminocyclopropane-1-carboxylate deaminase GO:0008660|GO:0009310|GO:0030170 KEGG: 00270+3.5.99.7 TMO_c0455 e96775f10a3498bea58ff9d2070b4f33 338 PIRSF PIRSF006278 1 338 5.9E-122 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase TMO_c0455 e96775f10a3498bea58ff9d2070b4f33 338 SUPERFAMILY SSF53686 6 333 3.02E-100 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_c0455 e96775f10a3498bea58ff9d2070b4f33 338 Gene3D G3DSA:3.40.50.1100 67 165 5.8E-119 T 14-10-2018 TMO_c0455 e96775f10a3498bea58ff9d2070b4f33 338 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 321 1.8E-45 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_c0455 e96775f10a3498bea58ff9d2070b4f33 338 Gene3D G3DSA:3.40.50.1100 8 328 5.8E-119 T 14-10-2018 TMO_0941 aa04d8711fa0e0e36006193cab535830 255 Pfam PF01323 DSBA-like thioredoxin domain 3 214 3.4E-36 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TMO_0941 aa04d8711fa0e0e36006193cab535830 255 SUPERFAMILY SSF52833 1 218 3.54E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_0941 aa04d8711fa0e0e36006193cab535830 255 Gene3D G3DSA:3.40.30.10 1 217 2.0E-70 T 14-10-2018 TMO_0666 0dc83a5bc23030a00c171891bfbbd65a 422 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 412 2.2E-103 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_0666 0dc83a5bc23030a00c171891bfbbd65a 422 PIRSF PIRSF006066 1 422 2.4E-116 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0666 0dc83a5bc23030a00c171891bfbbd65a 422 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 418 4.2E-116 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0197 6d87eb71aa42a6e419c558693ee7523c 122 SUPERFAMILY SSF74731 3 117 9.81E-47 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0197 6d87eb71aa42a6e419c558693ee7523c 122 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0197 6d87eb71aa42a6e419c558693ee7523c 122 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.809 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0197 6d87eb71aa42a6e419c558693ee7523c 122 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 1.0E-13 T 14-10-2018 TMO_0197 6d87eb71aa42a6e419c558693ee7523c 122 Gene3D G3DSA:1.10.720.90 2 55 7.9E-20 T 14-10-2018 TMO_0197 6d87eb71aa42a6e419c558693ee7523c 122 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 1.4E-45 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0197 6d87eb71aa42a6e419c558693ee7523c 122 Gene3D G3DSA:1.10.1900.20 56 119 4.1E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0197 6d87eb71aa42a6e419c558693ee7523c 122 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.2E-34 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0197 6d87eb71aa42a6e419c558693ee7523c 122 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.2E-34 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0197 6d87eb71aa42a6e419c558693ee7523c 122 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.2E-34 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0197 6d87eb71aa42a6e419c558693ee7523c 122 Pfam PF00453 Ribosomal protein L20 3 109 2.2E-46 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1778 d94de1d1b21912b04edcc95e4fc5bd3b 237 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 10 235 5.2E-83 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TMO_1778 d94de1d1b21912b04edcc95e4fc5bd3b 237 SUPERFAMILY SSF64005 10 230 4.71E-84 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TMO_1778 d94de1d1b21912b04edcc95e4fc5bd3b 237 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 181 198 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 TMO_1778 d94de1d1b21912b04edcc95e4fc5bd3b 237 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 8 236 39.197 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TMO_1778 d94de1d1b21912b04edcc95e4fc5bd3b 237 Pfam PF01255 Putative undecaprenyl diphosphate synthase 15 235 2.5E-77 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TMO_1778 d94de1d1b21912b04edcc95e4fc5bd3b 237 Gene3D G3DSA:3.40.1180.10 2 237 4.6E-90 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TMO_3218 4afe0b4489c549d77b19ce5ebe7b1219 117 Pfam PF09538 Protein of unknown function (FYDLN_acid) 2 114 8.7E-25 T 14-10-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid TMO_3218 4afe0b4489c549d77b19ce5ebe7b1219 117 TIGRFAM TIGR02300 FYDLN_acid: TIGR02300 family protein 1 116 6.3E-16 T 14-10-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid TMO_b0545 b723c0d94ab430436753f1da94406723 150 Pfam PF10116 Protein required for attachment to host cells 11 143 5.4E-29 T 14-10-2018 IPR019291 Host attachment protein TMO_c0376 eacdba039ef8961de4037dfe2f5320f0 509 Gene3D G3DSA:1.10.4160.10 26 501 3.8E-135 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily TMO_c0376 eacdba039ef8961de4037dfe2f5320f0 509 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 44 491 1.1E-120 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 TMO_c0376 eacdba039ef8961de4037dfe2f5320f0 509 TIGRFAM TIGR00800 ncs1: NCS1 nucleoside transporter family 38 472 1.3E-120 T 14-10-2018 IPR012681 Nucleobase cation symporter-1, NCS1 GO:0016020|GO:0022857|GO:0055085 TMO_2414 53545d1dc63426efb2e333bed57127af 399 SUPERFAMILY SSF48256 22 390 6.02E-117 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 TMO_2414 53545d1dc63426efb2e333bed57127af 399 PIRSF PIRSF001369 17 391 1.2E-100 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type TMO_2414 53545d1dc63426efb2e333bed57127af 399 Gene3D G3DSA:1.10.580.10 44 370 2.1E-118 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 TMO_2414 53545d1dc63426efb2e333bed57127af 399 PRINTS PR00143 Citrate synthase signature 323 339 1.8E-31 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_2414 53545d1dc63426efb2e333bed57127af 399 PRINTS PR00143 Citrate synthase signature 343 357 1.8E-31 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_2414 53545d1dc63426efb2e333bed57127af 399 PRINTS PR00143 Citrate synthase signature 266 286 1.8E-31 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_2414 53545d1dc63426efb2e333bed57127af 399 PRINTS PR00143 Citrate synthase signature 191 206 1.8E-31 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_2414 53545d1dc63426efb2e333bed57127af 399 PRINTS PR00143 Citrate synthase signature 213 241 1.8E-31 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_2414 53545d1dc63426efb2e333bed57127af 399 ProSitePatterns PS00480 Citrate synthase signature. 273 285 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 TMO_2414 53545d1dc63426efb2e333bed57127af 399 Pfam PF00285 Citrate synthase, C-terminal domain 24 372 1.3E-106 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_2414 53545d1dc63426efb2e333bed57127af 399 Gene3D G3DSA:1.10.230.10 239 337 2.1E-118 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain TMO_2414 53545d1dc63426efb2e333bed57127af 399 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 23 390 2.2E-141 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 TMO_2743 ac4cb92dda9e0f1215de4bef523e11db 553 Gene3D G3DSA:2.30.30.300 208 253 8.5E-72 T 14-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 TMO_2743 ac4cb92dda9e0f1215de4bef523e11db 553 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 69 78 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_2743 ac4cb92dda9e0f1215de4bef523e11db 553 SUPERFAMILY SSF52374 39 355 4.1E-59 T 14-10-2018 TMO_2743 ac4cb92dda9e0f1215de4bef523e11db 553 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 58 541 4.9E-55 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TMO_2743 ac4cb92dda9e0f1215de4bef523e11db 553 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 37 546 30.181 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TMO_2743 ac4cb92dda9e0f1215de4bef523e11db 553 SUPERFAMILY SSF48163 354 546 9.55E-46 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TMO_2743 ac4cb92dda9e0f1215de4bef523e11db 553 Gene3D G3DSA:1.10.10.350 455 544 4.9E-19 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TMO_2743 ac4cb92dda9e0f1215de4bef523e11db 553 Pfam PF01921 tRNA synthetases class I (K) 37 391 5.8E-132 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TMO_2743 ac4cb92dda9e0f1215de4bef523e11db 553 Gene3D G3DSA:3.40.50.620 46 306 8.5E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_a0273 0629b0650fb9e375392a29c444e09e49 306 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 8.1E-10 T 14-10-2018 TMO_a0273 0629b0650fb9e375392a29c444e09e49 306 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 8.1E-10 T 14-10-2018 TMO_a0273 0629b0650fb9e375392a29c444e09e49 306 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 1.1E-11 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_a0273 0629b0650fb9e375392a29c444e09e49 306 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 1.1E-11 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_a0273 0629b0650fb9e375392a29c444e09e49 306 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 284 1.1E-11 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_a0273 0629b0650fb9e375392a29c444e09e49 306 Gene3D G3DSA:3.50.50.60 115 232 7.0E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0273 0629b0650fb9e375392a29c444e09e49 306 Gene3D G3DSA:3.50.50.60 3 297 7.0E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0273 0629b0650fb9e375392a29c444e09e49 306 SUPERFAMILY SSF51905 1 300 8.77E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0273 0629b0650fb9e375392a29c444e09e49 306 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 116 1.6E-6 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_a0154 67ff1a8edac178dafdde8268044aec00 328 Pfam PF16868 NMT1-like family 38 319 2.0E-89 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_a0154 67ff1a8edac178dafdde8268044aec00 328 Gene3D G3DSA:3.40.190.10 38 319 1.9E-77 T 14-10-2018 TMO_a0154 67ff1a8edac178dafdde8268044aec00 328 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 8 319 1.6E-67 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_a0154 67ff1a8edac178dafdde8268044aec00 328 Gene3D G3DSA:3.40.190.10 122 256 1.9E-77 T 14-10-2018 TMO_a0154 67ff1a8edac178dafdde8268044aec00 328 SUPERFAMILY SSF53850 32 321 2.17E-65 T 14-10-2018 TMO_3065 d8870233e903394be6848c37eaaabf05 353 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 326 4.8E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2439 9158d645e4dc1722c8f4d4989c9ac0a1 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 314 1.7E-41 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_2439 9158d645e4dc1722c8f4d4989c9ac0a1 343 Gene3D G3DSA:3.40.190.170 25 343 4.7E-90 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_1120 d70d872dc260f950746e8dc89b998f38 87 Pfam PF02599 Global regulator protein family 1 52 5.9E-21 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TMO_1120 d70d872dc260f950746e8dc89b998f38 87 Gene3D G3DSA:3.30.70.1680 1 59 4.5E-23 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 TMO_1120 d70d872dc260f950746e8dc89b998f38 87 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 7.0E-9 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TMO_1120 d70d872dc260f950746e8dc89b998f38 87 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 76 15.765 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TMO_1120 d70d872dc260f950746e8dc89b998f38 87 SUPERFAMILY SSF117130 1 55 1.06E-15 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 TMO_1120 d70d872dc260f950746e8dc89b998f38 87 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 63 8.6E-22 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TMO_1167 aa614461dcc7fa3733f2c62be9477c56 228 Pfam PF04321 RmlD substrate binding domain 30 125 8.7E-7 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 TMO_1167 aa614461dcc7fa3733f2c62be9477c56 228 Gene3D G3DSA:3.40.50.720 1 222 7.1E-22 T 14-10-2018 TMO_1167 aa614461dcc7fa3733f2c62be9477c56 228 SUPERFAMILY SSF51735 1 216 5.01E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0886 5ccef5d26cee1e7464927dce4830cc70 550 Gene3D G3DSA:1.20.1250.20 25 483 2.3E-34 T 14-10-2018 TMO_c0886 5ccef5d26cee1e7464927dce4830cc70 550 Pfam PF07690 Major Facilitator Superfamily 40 438 5.4E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0886 5ccef5d26cee1e7464927dce4830cc70 550 SUPERFAMILY SSF103473 24 486 6.54E-44 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2920 3e4cb41a55f93d55ea009fdc34cc14d7 271 Gene3D G3DSA:3.40.50.300 13 268 9.6E-59 T 14-10-2018 TMO_2920 3e4cb41a55f93d55ea009fdc34cc14d7 271 Pfam PF00005 ABC transporter 37 180 6.5E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2920 3e4cb41a55f93d55ea009fdc34cc14d7 271 SUPERFAMILY SSF52540 16 244 2.57E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2920 3e4cb41a55f93d55ea009fdc34cc14d7 271 SMART SM00382 39 213 8.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2920 3e4cb41a55f93d55ea009fdc34cc14d7 271 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1528 a6bc3c3ee0062235640dbc1710cea669 111 SUPERFAMILY SSF52091 1 108 7.06E-26 T 14-10-2018 IPR036513 STAS domain superfamily TMO_1528 a6bc3c3ee0062235640dbc1710cea669 111 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 103 2.1E-22 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TMO_1528 a6bc3c3ee0062235640dbc1710cea669 111 Gene3D G3DSA:3.30.750.24 1 111 6.5E-30 T 14-10-2018 IPR036513 STAS domain superfamily TMO_1528 a6bc3c3ee0062235640dbc1710cea669 111 Pfam PF13466 STAS domain 17 93 9.9E-16 T 14-10-2018 IPR002645 STAS domain TMO_2181 0b7c72ce94fd5e38c38527a6a3e292bb 196 Gene3D G3DSA:1.10.357.10 4 184 7.1E-36 T 14-10-2018 TMO_2181 0b7c72ce94fd5e38c38527a6a3e292bb 196 SUPERFAMILY SSF46689 10 73 2.41E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2181 0b7c72ce94fd5e38c38527a6a3e292bb 196 SUPERFAMILY SSF48498 80 183 8.4E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_2181 0b7c72ce94fd5e38c38527a6a3e292bb 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 7.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1306 3d98c0cd742706aa6de440a50f200420 310 Pfam PF00892 EamA-like transporter family 2 128 3.8E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1306 3d98c0cd742706aa6de440a50f200420 310 Pfam PF00892 EamA-like transporter family 153 287 7.9E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1306 3d98c0cd742706aa6de440a50f200420 310 SUPERFAMILY SSF103481 50 132 3.01E-7 T 14-10-2018 TMO_1306 3d98c0cd742706aa6de440a50f200420 310 SUPERFAMILY SSF103481 190 292 4.58E-15 T 14-10-2018 TMO_1540 49a2d0784fd6848da26a17e753715b28 251 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 251 35.964 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TMO_1540 49a2d0784fd6848da26a17e753715b28 251 SUPERFAMILY SSF64167 2 249 3.14E-79 T 14-10-2018 TMO_1540 49a2d0784fd6848da26a17e753715b28 251 Pfam PF01975 Survival protein SurE 3 185 3.6E-56 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TMO_1540 49a2d0784fd6848da26a17e753715b28 251 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 237 2.9E-63 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TMO_1540 49a2d0784fd6848da26a17e753715b28 251 Gene3D G3DSA:3.40.1210.10 1 251 2.0E-88 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TMO_2636 8b931620c417d99b0014e8da2b4782a1 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.945 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TMO_2636 8b931620c417d99b0014e8da2b4782a1 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2636 8b931620c417d99b0014e8da2b4782a1 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.7E-68 T 14-10-2018 IPR023798 Ribosomal protein S7 domain TMO_2636 8b931620c417d99b0014e8da2b4782a1 156 SUPERFAMILY SSF47973 4 149 1.03E-61 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TMO_2636 8b931620c417d99b0014e8da2b4782a1 156 Gene3D G3DSA:1.10.455.10 2 156 1.3E-61 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TMO_2636 8b931620c417d99b0014e8da2b4782a1 156 PIRSF PIRSF002122 2 156 4.8E-61 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 TMO_2636 8b931620c417d99b0014e8da2b4782a1 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.7E-68 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TMO_b0487 f0fdb5b64261ea2ff7c436cb352ef6a0 335 Gene3D G3DSA:3.40.190.10 177 291 1.9E-46 T 14-10-2018 TMO_b0487 f0fdb5b64261ea2ff7c436cb352ef6a0 335 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 69 1.4E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0487 f0fdb5b64261ea2ff7c436cb352ef6a0 335 Gene3D G3DSA:3.40.190.10 109 318 1.9E-46 T 14-10-2018 TMO_b0487 f0fdb5b64261ea2ff7c436cb352ef6a0 335 Gene3D G3DSA:1.10.10.10 9 95 6.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0487 f0fdb5b64261ea2ff7c436cb352ef6a0 335 SUPERFAMILY SSF53850 96 326 4.34E-30 T 14-10-2018 TMO_b0487 f0fdb5b64261ea2ff7c436cb352ef6a0 335 SUPERFAMILY SSF46785 14 120 8.44E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0487 f0fdb5b64261ea2ff7c436cb352ef6a0 335 Pfam PF03466 LysR substrate binding domain 96 322 9.7E-27 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1446 3859e1f020ee60a7f9c205566af0fedc 191 Gene3D G3DSA:1.10.357.10 1 173 7.7E-27 T 14-10-2018 TMO_1446 3859e1f020ee60a7f9c205566af0fedc 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 4.8E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1446 3859e1f020ee60a7f9c205566af0fedc 191 SUPERFAMILY SSF48498 73 165 5.78E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1446 3859e1f020ee60a7f9c205566af0fedc 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1446 3859e1f020ee60a7f9c205566af0fedc 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1446 3859e1f020ee60a7f9c205566af0fedc 191 SUPERFAMILY SSF46689 2 74 8.98E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0209 8bcf6a9998ca25da23f859b8af105841 185 Pfam PF07484 Phage Tail Collar Domain 6 62 1.8E-24 T 14-10-2018 IPR011083 Phage tail collar domain TMO_0209 8bcf6a9998ca25da23f859b8af105841 185 SUPERFAMILY SSF88874 1 179 2.22E-46 T 14-10-2018 TMO_0209 8bcf6a9998ca25da23f859b8af105841 185 Gene3D G3DSA:3.90.1340.10 2 58 2.8E-14 T 14-10-2018 IPR037053 Phage tail collar domain superfamily TMO_2502 f0f85f08a00d7568a4c43bff63ef3962 407 TIGRFAM TIGR03106 trio_M42_hydro: hydrolase, peptidase M42 family 21 362 1.3E-166 T 14-10-2018 IPR017537 Peptidase M42, hydrolase TMO_2502 f0f85f08a00d7568a4c43bff63ef3962 407 Gene3D G3DSA:2.40.30.40 94 188 9.1E-79 T 14-10-2018 IPR023367 Peptidase M42, domain 2 TMO_2502 f0f85f08a00d7568a4c43bff63ef3962 407 SUPERFAMILY SSF53187 23 360 3.87E-45 T 14-10-2018 TMO_2502 f0f85f08a00d7568a4c43bff63ef3962 407 SUPERFAMILY SSF101821 91 203 5.8E-26 T 14-10-2018 TMO_2502 f0f85f08a00d7568a4c43bff63ef3962 407 Gene3D G3DSA:3.40.630.10 32 358 9.1E-79 T 14-10-2018 TMO_2502 f0f85f08a00d7568a4c43bff63ef3962 407 Pfam PF05343 M42 glutamyl aminopeptidase 66 354 9.0E-66 T 14-10-2018 IPR008007 Peptidase M42 TMO_0427 38e8e64058b1edb13cc0c87ca7c1d006 378 Pfam PF00155 Aminotransferase class I and II 28 364 1.0E-43 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_0427 38e8e64058b1edb13cc0c87ca7c1d006 378 Gene3D G3DSA:3.40.640.10 43 276 2.4E-109 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0427 38e8e64058b1edb13cc0c87ca7c1d006 378 SUPERFAMILY SSF53383 15 371 2.82E-86 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_0427 38e8e64058b1edb13cc0c87ca7c1d006 378 Gene3D G3DSA:3.90.1150.10 28 364 2.4E-109 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_a0155 f7d87ceafdc6edd40de115b6b94121e9 724 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 211 644 1.3E-87 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_a0155 f7d87ceafdc6edd40de115b6b94121e9 724 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 161 712 1.7E-190 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ TMO_3473 184134c502772e8048db4fb3356ccbac 206 Pfam PF01025 GrpE 30 184 1.7E-50 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TMO_3473 184134c502772e8048db4fb3356ccbac 206 Hamap MF_01151 Protein GrpE [grpE]. 2 185 19.688 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TMO_3473 184134c502772e8048db4fb3356ccbac 206 SUPERFAMILY SSF58014 32 129 2.88E-26 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TMO_3473 184134c502772e8048db4fb3356ccbac 206 Gene3D G3DSA:2.30.22.10 129 185 6.0E-22 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TMO_3473 184134c502772e8048db4fb3356ccbac 206 Gene3D G3DSA:3.90.20.20 28 128 7.3E-27 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TMO_3473 184134c502772e8048db4fb3356ccbac 206 SUPERFAMILY SSF51064 131 186 1.96E-17 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TMO_3473 184134c502772e8048db4fb3356ccbac 206 PRINTS PR00773 GrpE protein signature 164 183 4.9E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TMO_3473 184134c502772e8048db4fb3356ccbac 206 PRINTS PR00773 GrpE protein signature 78 93 4.9E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TMO_3473 184134c502772e8048db4fb3356ccbac 206 PRINTS PR00773 GrpE protein signature 50 66 4.9E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TMO_3473 184134c502772e8048db4fb3356ccbac 206 PRINTS PR00773 GrpE protein signature 137 152 4.9E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TMO_3473 184134c502772e8048db4fb3356ccbac 206 ProSitePatterns PS01071 grpE protein signature. 140 183 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TMO_c0778 6ebd552180532a02a81442d5db26dcbe 399 Gene3D G3DSA:3.30.70.1230 208 398 1.4E-38 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_c0778 6ebd552180532a02a81442d5db26dcbe 399 SMART SM00044 187 381 0.0017 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_c0778 6ebd552180532a02a81442d5db26dcbe 399 SUPERFAMILY SSF55073 214 397 7.38E-39 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_c0778 6ebd552180532a02a81442d5db26dcbe 399 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 216 389 3.9E-12 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_a0265 fb11626a806ab3c896babc46abb49d98 209 SUPERFAMILY SSF46689 13 93 2.19E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0265 fb11626a806ab3c896babc46abb49d98 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 6.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0265 fb11626a806ab3c896babc46abb49d98 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 6.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0265 fb11626a806ab3c896babc46abb49d98 209 Gene3D G3DSA:1.10.357.10 22 208 3.8E-61 T 14-10-2018 TMO_a0265 fb11626a806ab3c896babc46abb49d98 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 1.3E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0848 c3c3cd9cf12050115c36f815e80b30f8 232 SUPERFAMILY SSF52141 37 227 3.27E-48 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_c0848 c3c3cd9cf12050115c36f815e80b30f8 232 Pfam PF03167 Uracil DNA glycosylase superfamily 66 222 3.5E-22 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_c0848 c3c3cd9cf12050115c36f815e80b30f8 232 SMART SM00986 61 223 3.7E-27 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_c0848 c3c3cd9cf12050115c36f815e80b30f8 232 SMART SM00987 61 223 3.7E-27 T 14-10-2018 TMO_c0848 c3c3cd9cf12050115c36f815e80b30f8 232 Gene3D G3DSA:3.40.470.10 32 231 5.4E-61 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_a0523 f3d77ed21ef5f40c8083f4406bd962a8 179 SUPERFAMILY SSF52833 1 171 8.93E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_a0523 f3d77ed21ef5f40c8083f4406bd962a8 179 Gene3D G3DSA:3.40.30.10 1 165 2.3E-20 T 14-10-2018 TMO_a0523 f3d77ed21ef5f40c8083f4406bd962a8 179 Pfam PF00578 AhpC/TSA family 10 141 1.2E-15 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_1033 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 Gene3D G3DSA:3.40.190.10 101 283 7.2E-49 T 14-10-2018 TMO_1033 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 Pfam PF03466 LysR substrate binding domain 91 286 3.2E-31 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1033 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 SUPERFAMILY SSF46785 3 87 4.21E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1033 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 Gene3D G3DSA:1.10.10.10 7 94 3.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1033 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 Gene3D G3DSA:3.40.190.10 161 256 7.2E-49 T 14-10-2018 TMO_1033 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1033 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1033 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1033 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1033 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 SUPERFAMILY SSF53850 91 290 9.05E-31 T 14-10-2018 TMO_0925 2c47dfc51eda42258c2879c975aa777a 252 SUPERFAMILY SSF52540 5 249 7.82E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0925 2c47dfc51eda42258c2879c975aa777a 252 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 249 3.7E-12 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_0925 2c47dfc51eda42258c2879c975aa777a 252 Pfam PF00005 ABC transporter 21 179 3.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0925 2c47dfc51eda42258c2879c975aa777a 252 SMART SM00382 30 235 1.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0925 2c47dfc51eda42258c2879c975aa777a 252 Gene3D G3DSA:3.40.50.300 1 250 2.0E-66 T 14-10-2018 TMO_3529 9f46c87c5a4f0a4767822c0cec77398f 259 Gene3D G3DSA:3.40.630.30 4 145 2.4E-17 T 14-10-2018 TMO_3529 9f46c87c5a4f0a4767822c0cec77398f 259 Pfam PF13444 Acetyltransferase (GNAT) domain 16 123 7.2E-33 T 14-10-2018 TMO_3529 9f46c87c5a4f0a4767822c0cec77398f 259 SUPERFAMILY SSF55729 3 219 5.82E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2279 d99ad512a01577b149bffda7cd71d659 486 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 444 5.7E-114 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2279 d99ad512a01577b149bffda7cd71d659 486 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2279 d99ad512a01577b149bffda7cd71d659 486 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 462 8.3E-214 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 TMO_2279 d99ad512a01577b149bffda7cd71d659 486 Gene3D G3DSA:1.20.210.10 2 472 5.7E-180 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2279 d99ad512a01577b149bffda7cd71d659 486 SUPERFAMILY SSF81442 10 467 6.15E-117 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2075 7ec4ee0992e2fb7081f611224a4135a4 351 Gene3D G3DSA:3.50.50.60 16 346 3.3E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2075 7ec4ee0992e2fb7081f611224a4135a4 351 SUPERFAMILY SSF51905 16 350 9.25E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2075 7ec4ee0992e2fb7081f611224a4135a4 351 Pfam PF01593 Flavin containing amine oxidoreductase 122 349 2.3E-12 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 TMO_2075 7ec4ee0992e2fb7081f611224a4135a4 351 Gene3D G3DSA:3.90.660.10 53 312 3.3E-93 T 14-10-2018 TMO_2075 7ec4ee0992e2fb7081f611224a4135a4 351 Pfam PF13450 NAD(P)-binding Rossmann-like domain 17 75 2.2E-12 T 14-10-2018 TMO_b0294 daa20fc9421b7fdd6170f822d5530d07 384 Gene3D G3DSA:2.40.110.10 129 240 2.0E-34 T 14-10-2018 TMO_b0294 daa20fc9421b7fdd6170f822d5530d07 384 Gene3D G3DSA:1.10.540.10 1 126 6.2E-22 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_b0294 daa20fc9421b7fdd6170f822d5530d07 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_b0294 daa20fc9421b7fdd6170f822d5530d07 384 Gene3D G3DSA:1.20.140.10 241 384 6.4E-8 T 14-10-2018 TMO_b0294 daa20fc9421b7fdd6170f822d5530d07 384 SUPERFAMILY SSF56645 6 247 3.01E-62 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_b0294 daa20fc9421b7fdd6170f822d5530d07 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 124 1.6E-18 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_b0294 daa20fc9421b7fdd6170f822d5530d07 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 225 4.9E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_1864 dbc37435cc085cb05393cab4b6427bce 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 23.13 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TMO_1864 dbc37435cc085cb05393cab4b6427bce 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_1864 dbc37435cc085cb05393cab4b6427bce 78 Gene3D G3DSA:1.10.1200.10 1 78 3.8E-30 T 14-10-2018 IPR036736 ACP-like superfamily TMO_1864 dbc37435cc085cb05393cab4b6427bce 78 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0063 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_1864 dbc37435cc085cb05393cab4b6427bce 78 Pfam PF00550 Phosphopantetheine attachment site 6 72 4.1E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_1864 dbc37435cc085cb05393cab4b6427bce 78 SUPERFAMILY SSF47336 2 77 1.31E-23 T 14-10-2018 IPR036736 ACP-like superfamily TMO_1864 dbc37435cc085cb05393cab4b6427bce 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 75 2.0E-12 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TMO_1864 dbc37435cc085cb05393cab4b6427bce 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.7E-34 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TMO_1045 49375016db72af229dd01456df80c57b 816 SUPERFAMILY SSF56935 135 816 2.01E-131 T 14-10-2018 TMO_1045 49375016db72af229dd01456df80c57b 816 Pfam PF07715 TonB-dependent Receptor Plug Domain 175 274 2.1E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_1045 49375016db72af229dd01456df80c57b 816 Pfam PF00593 TonB dependent receptor 363 815 5.1E-63 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_1045 49375016db72af229dd01456df80c57b 816 Gene3D G3DSA:2.40.170.20 286 816 2.1E-134 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_1045 49375016db72af229dd01456df80c57b 816 SMART SM00965 77 128 1.8E-8 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_1045 49375016db72af229dd01456df80c57b 816 Gene3D G3DSA:2.170.130.10 151 285 2.0E-37 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_1045 49375016db72af229dd01456df80c57b 816 Gene3D G3DSA:3.55.50.30 46 150 1.3E-27 T 14-10-2018 TMO_1045 49375016db72af229dd01456df80c57b 816 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 176 814 3.4E-123 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_c0204 a751a58904a40e634c7a90bd1a1eb608 396 TIGRFAM TIGR04047 MSMEG_0565_glyc: glycosyltransferase, MSMEG_0565 family 9 381 3.0E-143 T 14-10-2018 IPR023986 Glycosyltransferase, putative, MSMEG0565 family TMO_c0204 a751a58904a40e634c7a90bd1a1eb608 396 Gene3D G3DSA:3.40.50.2000 177 364 4.4E-64 T 14-10-2018 TMO_c0204 a751a58904a40e634c7a90bd1a1eb608 396 Pfam PF00534 Glycosyl transferases group 1 202 355 1.1E-27 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 TMO_c0204 a751a58904a40e634c7a90bd1a1eb608 396 Gene3D G3DSA:3.40.50.2000 15 376 4.4E-64 T 14-10-2018 TMO_c0204 a751a58904a40e634c7a90bd1a1eb608 396 Pfam PF13439 Glycosyltransferase Family 4 21 181 8.1E-20 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TMO_c0204 a751a58904a40e634c7a90bd1a1eb608 396 SUPERFAMILY SSF53756 10 378 1.1E-62 T 14-10-2018 TMO_1219 f69e2b044edcd80d52c60a17c4893224 347 SUPERFAMILY SSF102114 18 291 6.41E-77 T 14-10-2018 TMO_1219 f69e2b044edcd80d52c60a17c4893224 347 Pfam PF04055 Radical SAM superfamily 32 193 7.0E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_1219 f69e2b044edcd80d52c60a17c4893224 347 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 33 44 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1219 f69e2b044edcd80d52c60a17c4893224 347 Pfam PF06463 Molybdenum Cofactor Synthesis C 200 326 1.7E-39 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1219 f69e2b044edcd80d52c60a17c4893224 347 Gene3D G3DSA:3.20.20.70 15 347 9.5E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1219 f69e2b044edcd80d52c60a17c4893224 347 SMART SM00729 27 228 1.1E-9 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_1219 f69e2b044edcd80d52c60a17c4893224 347 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 18 347 38.546 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1219 f69e2b044edcd80d52c60a17c4893224 347 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 18 347 3.2E-107 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1219 f69e2b044edcd80d52c60a17c4893224 347 Pfam PF13353 4Fe-4S single cluster domain 34 140 1.0E-6 T 14-10-2018 TMO_2806 2b386baa71c68d79fb6247c9e5c5bb53 334 Pfam PF02628 Cytochrome oxidase assembly protein 13 302 7.6E-50 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 TMO_1091 cae079cb8eff93f0053880b5203444bb 387 Hamap MF_00416 Flagellar P-ring protein [flgI]. 24 387 37.37 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_1091 cae079cb8eff93f0053880b5203444bb 387 Pfam PF02119 Flagellar P-ring protein 44 386 3.4E-144 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_1091 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 104 123 6.0E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_1091 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 273 285 6.0E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_1091 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 183 201 6.0E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_1091 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 44 59 6.0E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_1091 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 59 74 6.0E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_1091 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 79 94 6.0E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_1091 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 209 227 6.0E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_1091 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 126 143 6.0E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_1091 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 143 161 6.0E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_3187 35aa59478d04088608ecd55080be6b18 361 Gene3D G3DSA:1.10.3720.10 117 350 2.0E-15 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3187 35aa59478d04088608ecd55080be6b18 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 147 354 1.1E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3187 35aa59478d04088608ecd55080be6b18 361 SUPERFAMILY SSF161098 123 341 6.38E-11 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1176 ba52642ec7482f6a254cead8739916cd 156 SUPERFAMILY SSF47741 86 155 5.23E-36 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily TMO_1176 ba52642ec7482f6a254cead8739916cd 156 Gene3D G3DSA:1.10.150.120 77 156 1.1E-36 T 14-10-2018 TMO_1176 ba52642ec7482f6a254cead8739916cd 156 SUPERFAMILY SSF54292 3 80 1.97E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_1176 ba52642ec7482f6a254cead8739916cd 156 Pfam PF01799 [2Fe-2S] binding domain 75 147 6.8E-34 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_1176 ba52642ec7482f6a254cead8739916cd 156 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 61 4.7E-7 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_1176 ba52642ec7482f6a254cead8739916cd 156 Gene3D G3DSA:3.10.20.30 2 76 9.9E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_1436 c1dc5daded908a1b4513e61bef30c160 334 Pfam PF02541 Ppx/GppA phosphatase family 23 316 6.7E-50 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 TMO_1436 c1dc5daded908a1b4513e61bef30c160 334 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 133 146 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TMO_1436 c1dc5daded908a1b4513e61bef30c160 334 Gene3D G3DSA:3.30.420.40 2 124 4.2E-37 T 14-10-2018 TMO_1436 c1dc5daded908a1b4513e61bef30c160 334 SUPERFAMILY SSF53067 129 317 5.42E-38 T 14-10-2018 TMO_1436 c1dc5daded908a1b4513e61bef30c160 334 SUPERFAMILY SSF53067 4 124 3.24E-33 T 14-10-2018 TMO_1436 c1dc5daded908a1b4513e61bef30c160 334 Gene3D G3DSA:3.30.420.150 125 320 5.3E-49 T 14-10-2018 TMO_0422 7a2e94e743035e34b37d23cbdbebc2e5 593 SUPERFAMILY SSF52794 123 222 3.31E-35 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 TMO_0422 7a2e94e743035e34b37d23cbdbebc2e5 593 Gene3D G3DSA:3.40.50.2300 2 108 1.6E-11 T 14-10-2018 TMO_0422 7a2e94e743035e34b37d23cbdbebc2e5 593 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 126 215 7.7E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 TMO_0422 7a2e94e743035e34b37d23cbdbebc2e5 593 SUPERFAMILY SSF52794 20 105 7.06E-15 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 TMO_0422 7a2e94e743035e34b37d23cbdbebc2e5 593 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 248 581 2.1E-136 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 TMO_0422 7a2e94e743035e34b37d23cbdbebc2e5 593 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 125 208 1.2E-33 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 TMO_0422 7a2e94e743035e34b37d23cbdbebc2e5 593 Gene3D G3DSA:3.40.50.2300 114 223 1.2E-37 T 14-10-2018 TMO_0256 866ab943c1252b44a0a71429f932cf5d 392 Pfam PF01494 FAD binding domain 11 319 2.3E-14 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 TMO_0256 866ab943c1252b44a0a71429f932cf5d 392 Gene3D G3DSA:3.30.9.50 46 274 3.1E-60 T 14-10-2018 TMO_0256 866ab943c1252b44a0a71429f932cf5d 392 SUPERFAMILY SSF51905 10 379 1.05E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0256 866ab943c1252b44a0a71429f932cf5d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 5.8E-12 T 14-10-2018 TMO_0256 866ab943c1252b44a0a71429f932cf5d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 5.8E-12 T 14-10-2018 TMO_0256 866ab943c1252b44a0a71429f932cf5d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 5.8E-12 T 14-10-2018 TMO_0256 866ab943c1252b44a0a71429f932cf5d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 5.8E-12 T 14-10-2018 TMO_0256 866ab943c1252b44a0a71429f932cf5d 392 Gene3D G3DSA:3.50.50.60 13 346 3.1E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2775 0161c5c7c78959f0ec57cc22271d0c11 412 Gene3D G3DSA:3.40.1010.10 14 115 4.2E-13 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TMO_2775 0161c5c7c78959f0ec57cc22271d0c11 412 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 242 363 4.3E-28 T 14-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 TMO_2775 0161c5c7c78959f0ec57cc22271d0c11 412 SUPERFAMILY SSF53790 14 215 1.18E-39 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TMO_2775 0161c5c7c78959f0ec57cc22271d0c11 412 Gene3D G3DSA:3.40.50.150 227 411 5.9E-63 T 14-10-2018 TMO_2775 0161c5c7c78959f0ec57cc22271d0c11 412 PIRSF PIRSF036428 10 412 3.4E-126 T 14-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 TMO_2775 0161c5c7c78959f0ec57cc22271d0c11 412 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 201 1.0E-16 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TMO_2775 0161c5c7c78959f0ec57cc22271d0c11 412 SUPERFAMILY SSF53335 219 408 1.05E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_2775 0161c5c7c78959f0ec57cc22271d0c11 412 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 17 202 1.3E-44 T 14-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 TMO_c0178 30950278722f2a1017bf7ff70f4cd20c 311 SUPERFAMILY SSF54211 4 164 9.87E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_c0178 30950278722f2a1017bf7ff70f4cd20c 311 Gene3D G3DSA:3.30.70.890 173 297 3.7E-21 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TMO_c0178 30950278722f2a1017bf7ff70f4cd20c 311 Gene3D G3DSA:3.30.230.10 1 163 9.0E-46 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_c0178 30950278722f2a1017bf7ff70f4cd20c 311 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 306 28.274 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TMO_c0178 30950278722f2a1017bf7ff70f4cd20c 311 PIRSF PIRSF010376 1 304 4.1E-67 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TMO_c0178 30950278722f2a1017bf7ff70f4cd20c 311 Pfam PF00288 GHMP kinases N terminal domain 93 146 1.1E-6 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 TMO_c0178 30950278722f2a1017bf7ff70f4cd20c 311 Pfam PF08544 GHMP kinases C terminal 227 281 8.1E-7 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain TMO_c0178 30950278722f2a1017bf7ff70f4cd20c 311 SUPERFAMILY SSF55060 172 292 5.76E-21 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TMO_0634 0d7f478b34c8d00e79530e6578b4f9c8 250 SMART SM00382 30 224 2.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0634 0d7f478b34c8d00e79530e6578b4f9c8 250 Pfam PF00005 ABC transporter 22 177 7.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0634 0d7f478b34c8d00e79530e6578b4f9c8 250 SUPERFAMILY SSF52540 5 246 2.07E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0634 0d7f478b34c8d00e79530e6578b4f9c8 250 Gene3D G3DSA:3.40.50.300 2 248 4.5E-56 T 14-10-2018 TMO_0634 0d7f478b34c8d00e79530e6578b4f9c8 250 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 5.2E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 434 34.01 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 SUPERFAMILY SSF53720 29 430 8.24E-59 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 431 2.8E-130 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 1.9E-70 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 368 386 1.9E-70 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 327 352 1.9E-70 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 204 229 1.9E-70 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 1.9E-70 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 174 200 1.9E-70 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 1.9E-70 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 139 165 1.9E-70 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 Pfam PF00815 Histidinol dehydrogenase 22 431 2.1E-133 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 Gene3D G3DSA:3.40.50.1980 237 356 3.0E-104 T 14-10-2018 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 PIRSF PIRSF000099 1 437 1.7E-148 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 TMO_0437 a1cfad693dd215a519d6e548da4c00c1 440 Gene3D G3DSA:3.40.50.1980 33 235 3.0E-104 T 14-10-2018 TMO_c0126 25bcfbb3ecee0a6309a40cca938c86a8 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 355 1.3E-81 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_c0126 25bcfbb3ecee0a6309a40cca938c86a8 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 273 1.2E-30 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_c0126 25bcfbb3ecee0a6309a40cca938c86a8 367 SUPERFAMILY SSF111369 63 279 1.44E-47 T 14-10-2018 TMO_c0126 25bcfbb3ecee0a6309a40cca938c86a8 367 Gene3D G3DSA:2.40.420.20 285 352 3.7E-81 T 14-10-2018 TMO_c0126 25bcfbb3ecee0a6309a40cca938c86a8 367 Gene3D G3DSA:2.40.30.170 63 284 3.7E-81 T 14-10-2018 TMO_c0126 25bcfbb3ecee0a6309a40cca938c86a8 367 Gene3D G3DSA:1.10.287.470 108 167 3.7E-81 T 14-10-2018 TMO_c0126 25bcfbb3ecee0a6309a40cca938c86a8 367 Gene3D G3DSA:2.40.50.100 73 201 3.7E-81 T 14-10-2018 TMO_c0324 7d0fceb59328ba06ee260cb4b89cff96 96 TIGRFAM TIGR03510 XapX: XapX domain 4 49 4.8E-20 T 14-10-2018 IPR020017 XapX domain TMO_c0324 7d0fceb59328ba06ee260cb4b89cff96 96 Pfam PF07235 Protein of unknown function (DUF1427) 2 83 7.2E-40 T 14-10-2018 IPR009872 Protein of unknown function DUF1427 TMO_1300 7273008225b8ac707397c32c84d29d9a 189 SUPERFAMILY SSF88946 15 92 3.53E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_1300 7273008225b8ac707397c32c84d29d9a 189 SUPERFAMILY SSF88659 88 171 6.73E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_1300 7273008225b8ac707397c32c84d29d9a 189 Gene3D G3DSA:1.10.1740.10 11 84 3.2E-8 T 14-10-2018 TMO_1300 7273008225b8ac707397c32c84d29d9a 189 Pfam PF04542 Sigma-70 region 2 16 82 5.4E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_1300 7273008225b8ac707397c32c84d29d9a 189 Gene3D G3DSA:1.10.10.10 96 172 3.0E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1300 7273008225b8ac707397c32c84d29d9a 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 167 9.9E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_1300 7273008225b8ac707397c32c84d29d9a 189 Pfam PF08281 Sigma-70, region 4 115 166 1.1E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_c0395 40fdb46e8cff284db64175f6115cc3e3 211 Gene3D G3DSA:2.30.110.10 1 209 1.6E-66 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_c0395 40fdb46e8cff284db64175f6115cc3e3 211 PIRSF PIRSF010372 1 210 1.8E-67 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type TMO_c0395 40fdb46e8cff284db64175f6115cc3e3 211 Pfam PF04299 Putative FMN-binding domain 1 168 8.8E-57 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type TMO_c0395 40fdb46e8cff284db64175f6115cc3e3 211 SUPERFAMILY SSF50475 11 194 2.16E-36 T 14-10-2018 TMO_0533 3b6e63ef9d79d5fe1d18d70a235fab8b 214 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 1.6E-6 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TMO_0533 3b6e63ef9d79d5fe1d18d70a235fab8b 214 SUPERFAMILY SSF55186 84 209 6.93E-24 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TMO_0533 3b6e63ef9d79d5fe1d18d70a235fab8b 214 Gene3D G3DSA:3.30.980.10 84 212 1.4E-22 T 14-10-2018 TMO_0533 3b6e63ef9d79d5fe1d18d70a235fab8b 214 SUPERFAMILY SSF50447 1 83 1.48E-12 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_0533 3b6e63ef9d79d5fe1d18d70a235fab8b 214 Gene3D G3DSA:2.40.30.130 1 83 7.3E-14 T 14-10-2018 TMO_0533 3b6e63ef9d79d5fe1d18d70a235fab8b 214 Pfam PF01411 tRNA synthetases class II (A) 16 59 3.4E-5 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TMO_0533 3b6e63ef9d79d5fe1d18d70a235fab8b 214 SMART SM00863 166 208 9.8E-7 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TMO_2031 14f778a281152067784d7422826bc7fb 256 Gene3D G3DSA:3.40.50.10310 4 252 3.7E-59 T 14-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TMO_2031 14f778a281152067784d7422826bc7fb 256 SUPERFAMILY SSF102215 8 248 1.96E-59 T 14-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TMO_2031 14f778a281152067784d7422826bc7fb 256 Pfam PF02633 Creatinine amidohydrolase 12 247 4.5E-56 T 14-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TMO_b0293 d67f4b247901297f2305afbb9151e062 343 Gene3D G3DSA:1.20.140.10 196 331 1.5E-25 T 14-10-2018 TMO_b0293 d67f4b247901297f2305afbb9151e062 343 SUPERFAMILY SSF47203 190 332 1.32E-26 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_b0293 d67f4b247901297f2305afbb9151e062 343 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 190 306 7.1E-18 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_3295 c52b13dd42c9d7a6ec92a85631e6c5ba 318 Gene3D G3DSA:3.40.190.10 93 306 7.9E-36 T 14-10-2018 TMO_3295 c52b13dd42c9d7a6ec92a85631e6c5ba 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 9.8E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3295 c52b13dd42c9d7a6ec92a85631e6c5ba 318 SUPERFAMILY SSF53850 93 313 1.56E-19 T 14-10-2018 TMO_3295 c52b13dd42c9d7a6ec92a85631e6c5ba 318 Pfam PF03466 LysR substrate binding domain 99 313 2.0E-11 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_3295 c52b13dd42c9d7a6ec92a85631e6c5ba 318 SUPERFAMILY SSF46785 8 87 2.67E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3295 c52b13dd42c9d7a6ec92a85631e6c5ba 318 Gene3D G3DSA:1.10.10.10 3 91 1.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3295 c52b13dd42c9d7a6ec92a85631e6c5ba 318 Gene3D G3DSA:3.40.190.10 174 284 7.9E-36 T 14-10-2018 TMO_2624 22f87db4eaad443bdb02699c9a861524 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.202 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2624 22f87db4eaad443bdb02699c9a861524 67 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2624 22f87db4eaad443bdb02699c9a861524 67 SUPERFAMILY SSF46561 1 60 2.62E-22 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2624 22f87db4eaad443bdb02699c9a861524 67 Gene3D G3DSA:1.10.287.310 1 63 2.1E-29 T 14-10-2018 TMO_2624 22f87db4eaad443bdb02699c9a861524 67 Pfam PF00831 Ribosomal L29 protein 5 59 1.1E-25 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2624 22f87db4eaad443bdb02699c9a861524 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 58 1.1E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_0296 e29c239ed22cce5b841771ee9c10e29f 496 Gene3D G3DSA:3.40.190.10 185 477 1.2E-127 T 14-10-2018 TMO_0296 e29c239ed22cce5b841771ee9c10e29f 496 Gene3D G3DSA:3.90.76.10 39 184 1.2E-127 T 14-10-2018 TMO_0296 e29c239ed22cce5b841771ee9c10e29f 496 Gene3D G3DSA:3.10.105.10 260 468 1.2E-127 T 14-10-2018 TMO_0296 e29c239ed22cce5b841771ee9c10e29f 496 PIRSF PIRSF002741 8 496 7.4E-107 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_0296 e29c239ed22cce5b841771ee9c10e29f 496 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 401 2.4E-93 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_0296 e29c239ed22cce5b841771ee9c10e29f 496 SUPERFAMILY SSF53850 27 494 1.74E-133 T 14-10-2018 TMO_a0231 1c42cc5a1d8f73615732cbe9da8160c1 233 Pfam PF00005 ABC transporter 19 161 6.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0231 1c42cc5a1d8f73615732cbe9da8160c1 233 SMART SM00382 28 212 1.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0231 1c42cc5a1d8f73615732cbe9da8160c1 233 Gene3D G3DSA:3.40.50.300 1 231 3.2E-55 T 14-10-2018 TMO_a0231 1c42cc5a1d8f73615732cbe9da8160c1 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0231 1c42cc5a1d8f73615732cbe9da8160c1 233 SUPERFAMILY SSF52540 3 224 4.55E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0396 7efed4bef9ecfd0f87f5a28e675ca5a5 228 PIRSF PIRSF001427 1 226 4.0E-75 T 14-10-2018 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0396 7efed4bef9ecfd0f87f5a28e675ca5a5 228 Gene3D G3DSA:1.10.472.20 1 127 1.6E-37 T 14-10-2018 TMO_b0396 7efed4bef9ecfd0f87f5a28e675ca5a5 228 Pfam PF02211 Nitrile hydratase beta subunit 1 224 7.7E-75 T 14-10-2018 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0396 7efed4bef9ecfd0f87f5a28e675ca5a5 228 SUPERFAMILY SSF50090 1 226 7.46E-64 T 14-10-2018 IPR008990 Electron transport accessory-like domain superfamily TMO_b0396 7efed4bef9ecfd0f87f5a28e675ca5a5 228 Gene3D G3DSA:2.30.30.50 129 228 3.8E-31 T 14-10-2018 TMO_b0396 7efed4bef9ecfd0f87f5a28e675ca5a5 228 TIGRFAM TIGR03888 nitrile_beta: nitrile hydratase, beta subunit 1 225 9.9E-68 T 14-10-2018 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_1280 7262a14bd4398e577b114e2aa9f8d07b 253 SMART SM00382 46 241 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1280 7262a14bd4398e577b114e2aa9f8d07b 253 Pfam PF00005 ABC transporter 38 179 7.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1280 7262a14bd4398e577b114e2aa9f8d07b 253 SUPERFAMILY SSF52540 16 239 6.43E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1280 7262a14bd4398e577b114e2aa9f8d07b 253 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1280 7262a14bd4398e577b114e2aa9f8d07b 253 Gene3D G3DSA:3.40.50.300 20 252 1.2E-55 T 14-10-2018 TMO_1625 44e4709184b2f527b22ea9d94185e3e6 699 SMART SM00490 503 586 3.4E-17 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_1625 44e4709184b2f527b22ea9d94185e3e6 699 Gene3D G3DSA:3.40.50.300 216 445 2.5E-81 T 14-10-2018 TMO_1625 44e4709184b2f527b22ea9d94185e3e6 699 Gene3D G3DSA:3.40.50.300 452 627 1.1E-49 T 14-10-2018 TMO_1625 44e4709184b2f527b22ea9d94185e3e6 699 SMART SM00487 264 454 7.2E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_1625 44e4709184b2f527b22ea9d94185e3e6 699 SUPERFAMILY SSF52540 183 447 1.19E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1625 44e4709184b2f527b22ea9d94185e3e6 699 SUPERFAMILY SSF50249 9 176 8.39E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_1625 44e4709184b2f527b22ea9d94185e3e6 699 Pfam PF00270 DEAD/DEAH box helicase 270 426 1.1E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_1625 44e4709184b2f527b22ea9d94185e3e6 699 Pfam PF00271 Helicase conserved C-terminal domain 472 585 1.2E-15 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_1625 44e4709184b2f527b22ea9d94185e3e6 699 SUPERFAMILY SSF52540 382 643 6.41E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1583 8d45c64ed8d9a005772d3cfe8b02bde9 712 Pfam PF01464 Transglycosylase SLT domain 542 642 1.5E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 TMO_1583 8d45c64ed8d9a005772d3cfe8b02bde9 712 SUPERFAMILY SSF48435 59 520 2.88E-50 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 TMO_1583 8d45c64ed8d9a005772d3cfe8b02bde9 712 SUPERFAMILY SSF53955 542 682 1.19E-43 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_1583 8d45c64ed8d9a005772d3cfe8b02bde9 712 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 550 578 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 TMO_1583 8d45c64ed8d9a005772d3cfe8b02bde9 712 Gene3D G3DSA:1.25.20.10 59 422 9.5E-14 T 14-10-2018 TMO_1583 8d45c64ed8d9a005772d3cfe8b02bde9 712 Gene3D G3DSA:1.10.530.10 539 685 1.5E-45 T 14-10-2018 TMO_2432 f58313594af03129b1354d0ff783770c 399 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TMO_2432 f58313594af03129b1354d0ff783770c 399 SUPERFAMILY SSF48557 15 367 2.04E-80 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 TMO_2432 f58313594af03129b1354d0ff783770c 399 Pfam PF00206 Lyase 31 306 5.2E-40 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal TMO_2432 f58313594af03129b1354d0ff783770c 399 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 1.8E-20 T 14-10-2018 IPR000362 Fumarate lyase family TMO_2432 f58313594af03129b1354d0ff783770c 399 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 1.8E-20 T 14-10-2018 IPR000362 Fumarate lyase family TMO_2432 f58313594af03129b1354d0ff783770c 399 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 1.8E-20 T 14-10-2018 IPR000362 Fumarate lyase family TMO_2432 f58313594af03129b1354d0ff783770c 399 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 1.8E-20 T 14-10-2018 IPR000362 Fumarate lyase family TMO_2432 f58313594af03129b1354d0ff783770c 399 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 1.7E-8 T 14-10-2018 TMO_2432 f58313594af03129b1354d0ff783770c 399 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 1.7E-8 T 14-10-2018 TMO_2432 f58313594af03129b1354d0ff783770c 399 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 1.7E-8 T 14-10-2018 TMO_2432 f58313594af03129b1354d0ff783770c 399 Gene3D G3DSA:1.20.200.30 11 363 1.4E-108 T 14-10-2018 TMO_1849 3c66655392cb485499d75c4eb54678fd 730 Pfam PF04453 Organic solvent tolerance protein 299 663 2.5E-54 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 TMO_1849 3c66655392cb485499d75c4eb54678fd 730 Pfam PF03968 OstA-like protein 54 140 1.4E-5 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal TMO_1849 3c66655392cb485499d75c4eb54678fd 730 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 16 728 15.702 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 TMO_1849 3c66655392cb485499d75c4eb54678fd 730 Gene3D G3DSA:2.60.450.10 44 127 3.6E-6 T 14-10-2018 TMO_1695 529bb4a06f70600d8f48acaffc1ca4fe 146 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 84 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1695 529bb4a06f70600d8f48acaffc1ca4fe 146 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 46 65 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1695 529bb4a06f70600d8f48acaffc1ca4fe 146 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 36 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1695 529bb4a06f70600d8f48acaffc1ca4fe 146 Gene3D G3DSA:3.40.50.720 1 136 5.6E-31 T 14-10-2018 TMO_1695 529bb4a06f70600d8f48acaffc1ca4fe 146 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 33 61 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_1695 529bb4a06f70600d8f48acaffc1ca4fe 146 SUPERFAMILY SSF51735 1 129 8.46E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1695 529bb4a06f70600d8f48acaffc1ca4fe 146 Pfam PF00106 short chain dehydrogenase 1 84 1.5E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0489 2d9ac484145627c233802c206cb32d87 838 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 472 490 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Gene3D G3DSA:2.150.10.10 209 258 2.7E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Gene3D G3DSA:2.150.10.10 591 657 1.4E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Gene3D G3DSA:2.150.10.10 362 423 2.1E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Gene3D G3DSA:2.150.10.10 259 353 3.4E-5 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 PRINTS PR00313 NodO calcium binding signature 309 320 1.5E-7 T 14-10-2018 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 PRINTS PR00313 NodO calcium binding signature 546 554 1.5E-7 T 14-10-2018 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 PRINTS PR00313 NodO calcium binding signature 564 573 1.5E-7 T 14-10-2018 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 PRINTS PR00313 NodO calcium binding signature 467 475 1.5E-7 T 14-10-2018 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 SUPERFAMILY SSF51120 274 343 3.53E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 SUPERFAMILY SSF51120 683 836 6.02E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Gene3D G3DSA:2.150.10.10 521 582 4.0E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Gene3D G3DSA:2.150.10.10 442 501 8.1E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 SUPERFAMILY SSF51120 532 660 9.81E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 721 736 0.098 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 703 719 0.14 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 633 647 27.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 329 338 13.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 222 237 0.83 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 369 386 2.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 388 404 0.049 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 309 319 3.2 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 614 631 0.5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 239 255 0.46 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 545 562 0.35 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 476 490 45.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 457 474 4.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_b0489 2d9ac484145627c233802c206cb32d87 838 SUPERFAMILY SSF51120 191 265 2.88E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 717 735 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_b0489 2d9ac484145627c233802c206cb32d87 838 SUPERFAMILY SSF51120 408 503 4.58E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 629 647 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_b0489 2d9ac484145627c233802c206cb32d87 838 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 708 726 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_b0489 2d9ac484145627c233802c206cb32d87 838 SUPERFAMILY SSF51120 325 440 6.28E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_b0489 2d9ac484145627c233802c206cb32d87 838 Gene3D G3DSA:2.150.10.10 675 838 1.3E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_a0442 1414bd659a2fc05fab7bf570e4878433 160 SUPERFAMILY SSF54637 5 155 2.65E-41 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_a0442 1414bd659a2fc05fab7bf570e4878433 160 Pfam PF01575 MaoC like domain 16 116 1.2E-8 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_a0442 1414bd659a2fc05fab7bf570e4878433 160 Gene3D G3DSA:3.10.129.10 2 155 1.8E-41 T 14-10-2018 TMO_b0171 1471404c3c2a3445f3f1fc6dc2a170dc 262 Gene3D G3DSA:1.10.10.10 18 92 5.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0171 1471404c3c2a3445f3f1fc6dc2a170dc 262 SMART SM00866 109 252 9.9E-12 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_b0171 1471404c3c2a3445f3f1fc6dc2a170dc 262 Pfam PF07702 UTRA domain 116 251 6.0E-14 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_b0171 1471404c3c2a3445f3f1fc6dc2a170dc 262 Gene3D G3DSA:3.40.1410.10 95 258 1.4E-22 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_b0171 1471404c3c2a3445f3f1fc6dc2a170dc 262 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 88 9.2E-23 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0171 1471404c3c2a3445f3f1fc6dc2a170dc 262 SMART SM00345 29 88 1.4E-24 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0171 1471404c3c2a3445f3f1fc6dc2a170dc 262 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 62 2.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0171 1471404c3c2a3445f3f1fc6dc2a170dc 262 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 78 2.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0171 1471404c3c2a3445f3f1fc6dc2a170dc 262 SUPERFAMILY SSF46785 22 92 5.1E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0171 1471404c3c2a3445f3f1fc6dc2a170dc 262 SUPERFAMILY SSF64288 76 260 2.51E-28 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_b0516 b062adcb8a22b52c1b6a0694d646bc7e 174 SUPERFAMILY SSF54593 16 164 9.93E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0516 b062adcb8a22b52c1b6a0694d646bc7e 174 Gene3D G3DSA:3.10.180.10 2 168 2.5E-65 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0516 b062adcb8a22b52c1b6a0694d646bc7e 174 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 4 165 2.9E-57 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 TMO_b0516 b062adcb8a22b52c1b6a0694d646bc7e 174 ProSitePatterns PS00935 Glyoxalase I signature 2. 105 121 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 TMO_b0516 b062adcb8a22b52c1b6a0694d646bc7e 174 ProSitePatterns PS00934 Glyoxalase I signature 1. 18 39 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 TMO_b0516 b062adcb8a22b52c1b6a0694d646bc7e 174 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 17 161 2.3E-25 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_b0485 7df9374aa9346b548a4e35c035b3df2f 163 Pfam PF00578 AhpC/TSA family 27 111 2.3E-5 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_b0485 7df9374aa9346b548a4e35c035b3df2f 163 SUPERFAMILY SSF52833 16 162 1.54E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_b0485 7df9374aa9346b548a4e35c035b3df2f 163 Gene3D G3DSA:3.40.30.10 15 163 2.3E-26 T 14-10-2018 TMO_1161 5a4820a9191ffa9811c1ba477feaa82c 292 SUPERFAMILY SSF51735 3 260 9.39E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1161 5a4820a9191ffa9811c1ba477feaa82c 292 Gene3D G3DSA:3.90.25.10 142 273 2.2E-78 T 14-10-2018 TMO_1161 5a4820a9191ffa9811c1ba477feaa82c 292 Gene3D G3DSA:3.40.50.720 5 272 2.2E-78 T 14-10-2018 TMO_1161 5a4820a9191ffa9811c1ba477feaa82c 292 Pfam PF13460 NAD(P)H-binding 8 188 3.7E-21 T 14-10-2018 IPR016040 NAD(P)-binding domain TMO_c0293 618531ebb983b5b10190b4672e804666 387 Hamap MF_00188 Protease HtpX [htpX]. 72 386 24.93 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 TMO_c0293 618531ebb983b5b10190b4672e804666 387 Pfam PF01435 Peptidase family M48 156 386 3.5E-39 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_c0293 618531ebb983b5b10190b4672e804666 387 Gene3D G3DSA:3.30.2010.10 149 238 3.4E-31 T 14-10-2018 TMO_c0433 3ddf36e64e193effb14714b682e45333 405 Gene3D G3DSA:3.40.50.2300 151 376 2.2E-124 T 14-10-2018 TMO_c0433 3ddf36e64e193effb14714b682e45333 405 Pfam PF13458 Periplasmic binding protein 46 371 1.6E-67 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_c0433 3ddf36e64e193effb14714b682e45333 405 SUPERFAMILY SSF53822 33 386 7.85E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_c0433 3ddf36e64e193effb14714b682e45333 405 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 341 356 1.1E-7 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_c0433 3ddf36e64e193effb14714b682e45333 405 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 289 302 1.1E-7 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_c0433 3ddf36e64e193effb14714b682e45333 405 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 73 91 1.1E-7 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_c0433 3ddf36e64e193effb14714b682e45333 405 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 54 70 1.1E-7 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_c0433 3ddf36e64e193effb14714b682e45333 405 Gene3D G3DSA:3.40.50.2300 52 364 2.2E-124 T 14-10-2018 TMO_b0367 ccc355b3a648e97c68e5d0e4f1921647 281 SUPERFAMILY SSF52096 17 278 1.46E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_b0367 ccc355b3a648e97c68e5d0e4f1921647 281 Gene3D G3DSA:1.10.12.10 223 280 1.8E-20 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_b0367 ccc355b3a648e97c68e5d0e4f1921647 281 Pfam PF00378 Enoyl-CoA hydratase/isomerase 25 278 7.0E-47 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_b0367 ccc355b3a648e97c68e5d0e4f1921647 281 Gene3D G3DSA:3.90.226.10 16 222 9.5E-64 T 14-10-2018 TMO_1741 e90b66829b7ec69b6dc28a38853225c0 279 Gene3D G3DSA:3.40.50.150 41 218 1.3E-30 T 14-10-2018 TMO_1741 e90b66829b7ec69b6dc28a38853225c0 279 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 49 192 2.2E-27 T 14-10-2018 IPR006342 Methyltransferase FkbM TMO_1741 e90b66829b7ec69b6dc28a38853225c0 279 Pfam PF05050 Methyltransferase FkbM domain 50 197 1.4E-17 T 14-10-2018 IPR006342 Methyltransferase FkbM TMO_1741 e90b66829b7ec69b6dc28a38853225c0 279 SUPERFAMILY SSF53335 8 215 1.24E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_a0371 ca8b869589bab0ea5674ba30a46c97a8 105 Pfam PF09827 CRISPR associated protein Cas2 18 82 6.6E-11 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 TMO_a0371 ca8b869589bab0ea5674ba30a46c97a8 105 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 16 96 11.526 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 TMO_a0371 ca8b869589bab0ea5674ba30a46c97a8 105 SUPERFAMILY SSF143430 17 92 6.02E-14 T 14-10-2018 TMO_a0371 ca8b869589bab0ea5674ba30a46c97a8 105 Gene3D G3DSA:3.30.70.240 9 105 6.2E-15 T 14-10-2018 TMO_a0371 ca8b869589bab0ea5674ba30a46c97a8 105 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 18 97 6.0E-10 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 TMO_0014 b7c7bfb0fb8f204e76dd5901fd0dde30 230 Pfam PF01300 Telomere recombination 24 209 1.7E-8 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 TMO_0014 b7c7bfb0fb8f204e76dd5901fd0dde30 230 Gene3D G3DSA:3.90.870.10 10 199 2.1E-21 T 14-10-2018 TMO_0014 b7c7bfb0fb8f204e76dd5901fd0dde30 230 SUPERFAMILY SSF55821 18 211 3.66E-10 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TMO_0554 c767b140a3743e15d48aedf384e29f5c 343 Gene3D G3DSA:3.40.50.970 5 336 5.2E-105 T 14-10-2018 TMO_0554 c767b140a3743e15d48aedf384e29f5c 343 Pfam PF00676 Dehydrogenase E1 component 28 320 1.7E-67 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 TMO_0554 c767b140a3743e15d48aedf384e29f5c 343 SUPERFAMILY SSF52518 21 329 1.38E-84 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_0523 470c2e6ae1e0a907c6b28e9a961f3d51 374 Gene3D G3DSA:3.30.1540.10 225 318 3.5E-107 T 14-10-2018 TMO_0523 470c2e6ae1e0a907c6b28e9a961f3d51 374 Pfam PF02515 CoA-transferase family III 8 366 4.0E-101 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_0523 470c2e6ae1e0a907c6b28e9a961f3d51 374 Gene3D G3DSA:3.40.50.10540 7 338 3.5E-107 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_0523 470c2e6ae1e0a907c6b28e9a961f3d51 374 SUPERFAMILY SSF89796 6 366 4.06E-104 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_3094 fc3b7a620c2ff83a796a24d289353e68 258 Gene3D G3DSA:3.40.50.300 1 252 8.2E-61 T 14-10-2018 TMO_3094 fc3b7a620c2ff83a796a24d289353e68 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 1.3E-10 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_3094 fc3b7a620c2ff83a796a24d289353e68 258 SMART SM00382 29 237 6.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3094 fc3b7a620c2ff83a796a24d289353e68 258 Pfam PF00005 ABC transporter 22 180 9.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3094 fc3b7a620c2ff83a796a24d289353e68 258 SUPERFAMILY SSF52540 4 251 3.26E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0863 a1af52f2fe962115736d592b87f8b4e5 277 Gene3D G3DSA:3.40.50.300 83 141 6.5E-8 T 14-10-2018 TMO_c0863 a1af52f2fe962115736d592b87f8b4e5 277 SUPERFAMILY SSF53795 82 202 8.85E-13 T 14-10-2018 TMO_a0196 7f027384e7ed5055008df31b1005b14c 304 Gene3D G3DSA:2.60.120.10 230 301 1.6E-13 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_a0196 7f027384e7ed5055008df31b1005b14c 304 SUPERFAMILY SSF53335 28 203 6.81E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_a0196 7f027384e7ed5055008df31b1005b14c 304 Pfam PF08241 Methyltransferase domain 47 142 7.5E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TMO_a0196 7f027384e7ed5055008df31b1005b14c 304 Gene3D G3DSA:3.40.50.150 18 205 2.7E-38 T 14-10-2018 TMO_a0196 7f027384e7ed5055008df31b1005b14c 304 SUPERFAMILY SSF51182 230 300 2.39E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_a0196 7f027384e7ed5055008df31b1005b14c 304 Pfam PF07883 Cupin domain 242 300 2.7E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_2039 8df20cae3bc0bf59914e99af8446b2aa 165 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site TMO_2039 8df20cae3bc0bf59914e99af8446b2aa 165 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 2.3E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_2039 8df20cae3bc0bf59914e99af8446b2aa 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 8.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_2039 8df20cae3bc0bf59914e99af8446b2aa 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 8.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_2039 8df20cae3bc0bf59914e99af8446b2aa 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 8.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_2039 8df20cae3bc0bf59914e99af8446b2aa 165 SMART SM00344 6 115 8.6E-44 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_2039 8df20cae3bc0bf59914e99af8446b2aa 165 SUPERFAMILY SSF54909 67 155 8.58E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_2039 8df20cae3bc0bf59914e99af8446b2aa 165 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 1.4E-20 T 14-10-2018 TMO_2039 8df20cae3bc0bf59914e99af8446b2aa 165 SUPERFAMILY SSF46785 5 65 2.94E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2039 8df20cae3bc0bf59914e99af8446b2aa 165 Gene3D G3DSA:1.10.10.10 7 58 2.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2039 8df20cae3bc0bf59914e99af8446b2aa 165 Gene3D G3DSA:3.30.70.920 59 143 5.6E-25 T 14-10-2018 TMO_2846 cb2e99b6434e52f1901e487b0c232123 196 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 2.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2846 cb2e99b6434e52f1901e487b0c232123 196 PRINTS PR00598 Bacterial regulatory protein MarR family signature 165 185 2.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2846 cb2e99b6434e52f1901e487b0c232123 196 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 151 2.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2846 cb2e99b6434e52f1901e487b0c232123 196 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 131 2.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2846 cb2e99b6434e52f1901e487b0c232123 196 Pfam PF01047 MarR family 81 140 8.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2846 cb2e99b6434e52f1901e487b0c232123 196 Gene3D G3DSA:1.10.10.10 29 188 2.2E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2846 cb2e99b6434e52f1901e487b0c232123 196 SMART SM00347 72 175 2.1E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2846 cb2e99b6434e52f1901e487b0c232123 196 SUPERFAMILY SSF46785 41 187 8.4E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1498 96a9bee7f778e70aa3fccd4ee63b5704 68 Gene3D G3DSA:1.10.260.40 6 67 2.6E-10 T 14-10-2018 TMO_1498 96a9bee7f778e70aa3fccd4ee63b5704 68 SMART SM00530 6 62 5.4E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_1498 96a9bee7f778e70aa3fccd4ee63b5704 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 1.6E-22 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_1498 96a9bee7f778e70aa3fccd4ee63b5704 68 SUPERFAMILY SSF47413 1 66 2.03E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_c0540 bab358e41e5bfc3edc608f02815bb65c 194 Pfam PF13420 Acetyltransferase (GNAT) domain 21 175 1.3E-20 T 14-10-2018 TMO_c0540 bab358e41e5bfc3edc608f02815bb65c 194 Gene3D G3DSA:3.40.630.30 13 192 2.4E-50 T 14-10-2018 TMO_c0540 bab358e41e5bfc3edc608f02815bb65c 194 SUPERFAMILY SSF55729 21 183 1.89E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2034 44f9ef1821f651640834f11c7fb89365 593 Gene3D G3DSA:3.30.300.30 443 575 1.3E-6 T 14-10-2018 TMO_2034 44f9ef1821f651640834f11c7fb89365 593 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_2034 44f9ef1821f651640834f11c7fb89365 593 Gene3D G3DSA:3.40.50.12780 3 304 1.4E-47 T 14-10-2018 TMO_2034 44f9ef1821f651640834f11c7fb89365 593 Pfam PF00501 AMP-binding enzyme 9 449 4.2E-77 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_2034 44f9ef1821f651640834f11c7fb89365 593 Gene3D G3DSA:3.40.50.12780 305 442 3.9E-29 T 14-10-2018 TMO_2034 44f9ef1821f651640834f11c7fb89365 593 SUPERFAMILY SSF56801 10 580 1.26E-105 T 14-10-2018 TMO_0637 dc0860e56f0f742517566dc3d1ce3360 421 SUPERFAMILY SSF53822 31 386 4.71E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_0637 dc0860e56f0f742517566dc3d1ce3360 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 74 92 1.9E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_0637 dc0860e56f0f742517566dc3d1ce3360 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 55 71 1.9E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_0637 dc0860e56f0f742517566dc3d1ce3360 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 353 368 1.9E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_0637 dc0860e56f0f742517566dc3d1ce3360 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 33 49 1.9E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_0637 dc0860e56f0f742517566dc3d1ce3360 421 Gene3D G3DSA:3.40.50.2300 32 376 9.6E-147 T 14-10-2018 TMO_0637 dc0860e56f0f742517566dc3d1ce3360 421 Gene3D G3DSA:3.40.50.2300 159 415 9.6E-147 T 14-10-2018 TMO_0637 dc0860e56f0f742517566dc3d1ce3360 421 Pfam PF13458 Periplasmic binding protein 32 384 1.1E-67 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_c0319 59ba48b9c60ef2ad609f9af2b1ec5559 424 SUPERFAMILY SSF82544 6 423 2.35E-140 T 14-10-2018 TMO_c0319 59ba48b9c60ef2ad609f9af2b1ec5559 424 Gene3D G3DSA:3.40.50.10180 38 256 1.3E-135 T 14-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 TMO_c0319 59ba48b9c60ef2ad609f9af2b1ec5559 424 Pfam PF05161 MOFRL family 313 417 3.3E-35 T 14-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 TMO_c0319 59ba48b9c60ef2ad609f9af2b1ec5559 424 Gene3D G3DSA:3.40.1480.10 257 418 1.3E-135 T 14-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily TMO_c0319 59ba48b9c60ef2ad609f9af2b1ec5559 424 Pfam PF13660 Domain of unknown function (DUF4147) 9 232 1.3E-75 T 14-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 TMO_1795 bac4f51ae88ea2f704c668c2f12d1683 209 Gene3D G3DSA:3.40.50.360 1 205 4.8E-61 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_1795 bac4f51ae88ea2f704c668c2f12d1683 209 Pfam PF02525 Flavodoxin-like fold 1 201 3.5E-47 T 14-10-2018 IPR003680 Flavodoxin-like fold TMO_1795 bac4f51ae88ea2f704c668c2f12d1683 209 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 203 32.112 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 TMO_1795 bac4f51ae88ea2f704c668c2f12d1683 209 SUPERFAMILY SSF52218 1 205 3.52E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_2618 a289a6a8d597af264a6682813a3acaa4 132 SUPERFAMILY SSF56047 2 132 1.57E-43 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2618 a289a6a8d597af264a6682813a3acaa4 132 Pfam PF00410 Ribosomal protein S8 5 132 5.3E-44 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2618 a289a6a8d597af264a6682813a3acaa4 132 Gene3D G3DSA:3.30.1490.10 76 132 3.4E-23 T 14-10-2018 TMO_2618 a289a6a8d597af264a6682813a3acaa4 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2618 a289a6a8d597af264a6682813a3acaa4 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 29.239 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2618 a289a6a8d597af264a6682813a3acaa4 132 Gene3D G3DSA:3.30.1370.30 2 74 1.2E-22 T 14-10-2018 TMO_a0075 41068202cc7959b1e4c3bc7e7569414f 256 SUPERFAMILY SSF81606 5 238 9.42E-56 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TMO_a0075 41068202cc7959b1e4c3bc7e7569414f 256 Gene3D G3DSA:3.60.40.10 1 242 6.9E-55 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TMO_a0075 41068202cc7959b1e4c3bc7e7569414f 256 SMART SM00332 3 238 2.5E-10 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TMO_a0075 41068202cc7959b1e4c3bc7e7569414f 256 Pfam PF13672 Protein phosphatase 2C 18 205 8.9E-12 T 14-10-2018 TMO_a0075 41068202cc7959b1e4c3bc7e7569414f 256 SMART SM00331 13 240 1.3E-21 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TMO_1638 1361cc5d0c8a2fd31a48616f6b272ff1 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.3E-24 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_1638 1361cc5d0c8a2fd31a48616f6b272ff1 68 SMART SM00357 3 67 3.7E-24 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 TMO_1638 1361cc5d0c8a2fd31a48616f6b272ff1 68 SUPERFAMILY SSF50249 1 66 5.57E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_1638 1361cc5d0c8a2fd31a48616f6b272ff1 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site TMO_1638 1361cc5d0c8a2fd31a48616f6b272ff1 68 PIRSF PIRSF002599 1 68 2.2E-22 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 TMO_1638 1361cc5d0c8a2fd31a48616f6b272ff1 68 Gene3D G3DSA:2.40.50.140 1 65 4.3E-25 T 14-10-2018 TMO_1638 1361cc5d0c8a2fd31a48616f6b272ff1 68 PRINTS PR00050 Cold shock protein signature 4 19 4.1E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_1638 1361cc5d0c8a2fd31a48616f6b272ff1 68 PRINTS PR00050 Cold shock protein signature 25 34 4.1E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_1638 1361cc5d0c8a2fd31a48616f6b272ff1 68 PRINTS PR00050 Cold shock protein signature 40 58 4.1E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_2387 cee87fce956c722d9cfa7118e3b92088 72 Gene3D G3DSA:1.20.120.910 2 68 2.0E-15 T 14-10-2018 TMO_2387 cee87fce956c722d9cfa7118e3b92088 72 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 29 65 9.6E-12 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TMO_2387 cee87fce956c722d9cfa7118e3b92088 72 SUPERFAMILY SSF57716 34 66 7.41E-6 T 14-10-2018 TMO_1107 021204074525012e4fbcce6f033cd5d9 1054 SUPERFAMILY SSF48452 527 955 7.4E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_1107 021204074525012e4fbcce6f033cd5d9 1054 Gene3D G3DSA:1.25.40.10 498 811 4.2E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3070 8e16c1fac568bd25712b85c269abe9c7 576 SUPERFAMILY SSF143975 3 376 6.02E-125 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_3070 8e16c1fac568bd25712b85c269abe9c7 576 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_3070 8e16c1fac568bd25712b85c269abe9c7 576 Gene3D G3DSA:3.50.30.80 377 531 1.4E-47 T 14-10-2018 TMO_3070 8e16c1fac568bd25712b85c269abe9c7 576 SUPERFAMILY SSF52016 378 562 4.63E-58 T 14-10-2018 TMO_3070 8e16c1fac568bd25712b85c269abe9c7 576 Pfam PF00920 Dehydratase family 41 557 1.7E-178 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_3547 cef1031dcfecfb04bcdd744229443b4e 449 Pfam PF03060 Nitronate monooxygenase 113 340 2.6E-8 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_3547 cef1031dcfecfb04bcdd744229443b4e 449 SUPERFAMILY SSF51412 11 301 7.32E-7 T 14-10-2018 TMO_3547 cef1031dcfecfb04bcdd744229443b4e 449 Gene3D G3DSA:3.20.20.70 1 448 2.1E-24 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_c0387 44952bda8c912ad2be0879db7c5d8d14 635 Pfam PF09709 CRISPR-associated protein (Cas_Csd1) 6 612 3.5E-154 T 14-10-2018 IPR010144 CRISPR-associated protein, Csd1-type TMO_c0387 44952bda8c912ad2be0879db7c5d8d14 635 TIGRFAM TIGR01863 cas_Csd1: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG 3 615 3.5E-148 T 14-10-2018 IPR010144 CRISPR-associated protein, Csd1-type TMO_2630 14bc679d810da5b6fc005087f9b4dc64 97 Pfam PF00276 Ribosomal protein L23 8 93 1.0E-34 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TMO_2630 14bc679d810da5b6fc005087f9b4dc64 97 SUPERFAMILY SSF54189 5 95 1.69E-34 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2630 14bc679d810da5b6fc005087f9b4dc64 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 96 22.726 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TMO_2630 14bc679d810da5b6fc005087f9b4dc64 97 ProSitePatterns PS00050 Ribosomal protein L23 signature. 79 94 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2630 14bc679d810da5b6fc005087f9b4dc64 97 Gene3D G3DSA:3.30.70.330 1 97 1.5E-35 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TMO_0455 ac66384665ad8020d6ee4d362734a0e1 224 PIRSF PIRSF001426 8 221 5.1E-96 T 14-10-2018 IPR023900 Nitrile hydratase alpha subunit /Thiocyanate hydrolase gamma subunit KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_0455 ac66384665ad8020d6ee4d362734a0e1 224 TIGRFAM TIGR01323 nitrile_alph: nitrile hydratase, alpha subunit 31 213 5.4E-93 T 14-10-2018 IPR018141 Nitrile hydratase, alpha subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_0455 ac66384665ad8020d6ee4d362734a0e1 224 ProDom PD007559 HYDRATASE NITRILE ALPHA SUBUNIT LYASE CHAIN METAL-BINDING DIRECT SEQUENCING NITRILASE 35 211 7.0E-77 T 14-10-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_0455 ac66384665ad8020d6ee4d362734a0e1 224 Pfam PF02979 Nitrile hydratase, alpha chain 31 213 9.2E-88 T 14-10-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_0455 ac66384665ad8020d6ee4d362734a0e1 224 Gene3D G3DSA:3.90.330.10 2 221 7.1E-93 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_0455 ac66384665ad8020d6ee4d362734a0e1 224 SUPERFAMILY SSF56209 18 213 1.83E-84 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_3486 cc6320552e9a1122c6d6a6cde7053bd1 333 SMART SM00382 38 222 6.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3486 cc6320552e9a1122c6d6a6cde7053bd1 333 Gene3D G3DSA:3.40.50.300 14 277 2.6E-73 T 14-10-2018 TMO_3486 cc6320552e9a1122c6d6a6cde7053bd1 333 SUPERFAMILY SSF52540 13 250 1.13E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3486 cc6320552e9a1122c6d6a6cde7053bd1 333 SUPERFAMILY SSF50331 246 326 4.08E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_3486 cc6320552e9a1122c6d6a6cde7053bd1 333 Pfam PF00005 ABC transporter 30 172 3.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3486 cc6320552e9a1122c6d6a6cde7053bd1 333 Pfam PF08402 TOBE domain 260 326 5.9E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_c0036 2dad80b94645de1f236bba61889b46a4 142 Gene3D G3DSA:3.40.30.10 1 120 9.9E-15 T 14-10-2018 TMO_c0036 2dad80b94645de1f236bba61889b46a4 142 SUPERFAMILY SSF52833 4 116 1.02E-10 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0036 2dad80b94645de1f236bba61889b46a4 142 Pfam PF13462 Thioredoxin 7 96 3.3E-6 T 14-10-2018 IPR012336 Thioredoxin-like fold TMO_c0220 28ba9bf41558c048d894bb5718aba588 584 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0220 28ba9bf41558c048d894bb5718aba588 584 Pfam PF00005 ABC transporter 29 171 2.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0220 28ba9bf41558c048d894bb5718aba588 584 SUPERFAMILY SSF52540 14 234 5.43E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0220 28ba9bf41558c048d894bb5718aba588 584 Gene3D G3DSA:3.40.50.300 326 562 1.8E-63 T 14-10-2018 TMO_c0220 28ba9bf41558c048d894bb5718aba588 584 Gene3D G3DSA:3.40.50.300 7 240 4.9E-58 T 14-10-2018 TMO_c0220 28ba9bf41558c048d894bb5718aba588 584 SUPERFAMILY SSF52540 329 553 7.78E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0220 28ba9bf41558c048d894bb5718aba588 584 Pfam PF00005 ABC transporter 351 494 5.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0220 28ba9bf41558c048d894bb5718aba588 584 SMART SM00382 359 549 2.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0220 28ba9bf41558c048d894bb5718aba588 584 SMART SM00382 38 256 2.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_d0059 8ac77332e986ba0c1bbf8d26b25ca750 356 SUPERFAMILY SSF117892 101 217 2.09E-21 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily TMO_d0059 8ac77332e986ba0c1bbf8d26b25ca750 356 Pfam PF01145 SPFH domain / Band 7 family 36 227 9.3E-25 T 14-10-2018 IPR001107 Band 7 domain TMO_d0059 8ac77332e986ba0c1bbf8d26b25ca750 356 TIGRFAM TIGR01933 hflK: HflK protein 34 301 1.3E-83 T 14-10-2018 IPR010201 HflK GO:0016021 TMO_d0059 8ac77332e986ba0c1bbf8d26b25ca750 356 SMART SM00244 32 212 7.1E-23 T 14-10-2018 IPR001107 Band 7 domain TMO_d0059 8ac77332e986ba0c1bbf8d26b25ca750 356 Gene3D G3DSA:3.30.479.30 96 203 8.3E-22 T 14-10-2018 TMO_0510 2a679f36fd27818893f5ef92b51e2f62 396 SUPERFAMILY SSF47203 246 393 4.99E-42 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_0510 2a679f36fd27818893f5ef92b51e2f62 396 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 230 2.0E-23 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_0510 2a679f36fd27818893f5ef92b51e2f62 396 Gene3D G3DSA:1.10.540.10 6 137 1.3E-41 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_0510 2a679f36fd27818893f5ef92b51e2f62 396 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 348 367 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_0510 2a679f36fd27818893f5ef92b51e2f62 396 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 388 2.1E-28 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_0510 2a679f36fd27818893f5ef92b51e2f62 396 SUPERFAMILY SSF56645 10 241 1.83E-82 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_0510 2a679f36fd27818893f5ef92b51e2f62 396 Gene3D G3DSA:2.40.110.10 138 242 1.1E-41 T 14-10-2018 TMO_0510 2a679f36fd27818893f5ef92b51e2f62 396 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 135 2.3E-33 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_0510 2a679f36fd27818893f5ef92b51e2f62 396 Gene3D G3DSA:1.20.140.10 244 396 5.1E-41 T 14-10-2018 TMO_b0538 194c2add076ac5c70010f761ca538cd7 437 SUPERFAMILY SSF103473 2 435 2.75E-63 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_b0538 194c2add076ac5c70010f761ca538cd7 437 Gene3D G3DSA:1.20.1250.20 247 437 2.5E-21 T 14-10-2018 TMO_b0538 194c2add076ac5c70010f761ca538cd7 437 Pfam PF07690 Major Facilitator Superfamily 4 395 4.2E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_b0538 194c2add076ac5c70010f761ca538cd7 437 Gene3D G3DSA:1.20.1720.10 1 232 1.1E-44 T 14-10-2018 TMO_b0538 194c2add076ac5c70010f761ca538cd7 437 PRINTS PR01036 Tetracycline resistance protein TetB signature 3 27 1.7E-6 T 14-10-2018 TMO_b0538 194c2add076ac5c70010f761ca538cd7 437 PRINTS PR01036 Tetracycline resistance protein TetB signature 386 405 1.7E-6 T 14-10-2018 TMO_b0538 194c2add076ac5c70010f761ca538cd7 437 PRINTS PR01036 Tetracycline resistance protein TetB signature 94 114 1.7E-6 T 14-10-2018 TMO_b0538 194c2add076ac5c70010f761ca538cd7 437 PRINTS PR01036 Tetracycline resistance protein TetB signature 124 148 1.7E-6 T 14-10-2018 TMO_b0538 194c2add076ac5c70010f761ca538cd7 437 PRINTS PR01036 Tetracycline resistance protein TetB signature 323 343 1.7E-6 T 14-10-2018 TMO_b0558 83186aa2f52ffaf65907d19a0c627039 165 SUPERFAMILY SSF55961 5 160 3.88E-21 T 14-10-2018 TMO_b0558 83186aa2f52ffaf65907d19a0c627039 165 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 137 1.7E-7 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like TMO_b0558 83186aa2f52ffaf65907d19a0c627039 165 Gene3D G3DSA:3.30.530.20 3 163 9.7E-28 T 14-10-2018 IPR023393 START-like domain superfamily TMO_a0179 0db43776026d64facc2caa75d0eee58d 223 Gene3D G3DSA:1.10.357.10 21 206 8.1E-42 T 14-10-2018 TMO_a0179 0db43776026d64facc2caa75d0eee58d 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0179 0db43776026d64facc2caa75d0eee58d 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0179 0db43776026d64facc2caa75d0eee58d 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 69 1.2E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0179 0db43776026d64facc2caa75d0eee58d 223 SUPERFAMILY SSF46689 11 92 3.54E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_3204 0e0e02adae8a743acbc3848d49e30591 141 Gene3D G3DSA:2.170.150.40 11 123 1.1E-37 T 14-10-2018 TMO_3204 0e0e02adae8a743acbc3848d49e30591 141 Pfam PF04248 Domain of unknown function (DUF427) 25 117 6.6E-33 T 14-10-2018 IPR007361 Domain of unknown function DUF427 TMO_0859 b008866c1dc0a2da7459751acb374352 224 Pfam PF08362 YcdC-like protein, C-terminal region 74 216 3.0E-53 T 14-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 TMO_0859 b008866c1dc0a2da7459751acb374352 224 Gene3D G3DSA:1.10.357.10 74 216 1.1E-50 T 14-10-2018 TMO_0859 b008866c1dc0a2da7459751acb374352 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 1.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0859 b008866c1dc0a2da7459751acb374352 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 1.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0859 b008866c1dc0a2da7459751acb374352 224 Gene3D G3DSA:1.10.10.60 8 72 4.7E-21 T 14-10-2018 TMO_0859 b008866c1dc0a2da7459751acb374352 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 1.0E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0859 b008866c1dc0a2da7459751acb374352 224 SUPERFAMILY SSF46689 13 94 2.34E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0859 b008866c1dc0a2da7459751acb374352 224 SUPERFAMILY SSF48498 91 216 1.13E-41 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_0025 b515b4401ddfcaa4787b31aa974e06e4 174 Gene3D G3DSA:3.10.129.10 32 168 7.0E-33 T 14-10-2018 TMO_0025 b515b4401ddfcaa4787b31aa974e06e4 174 Pfam PF13279 Thioesterase-like superfamily 45 162 6.9E-13 T 14-10-2018 TMO_0025 b515b4401ddfcaa4787b31aa974e06e4 174 SUPERFAMILY SSF54637 36 166 1.67E-34 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_a0545 7087e31377dfeb413d9c13d987121811 196 Pfam PF06042 Nucleotidyltransferase 25 183 4.1E-58 T 14-10-2018 IPR009267 Putative nucleotidyltransferase TMO_3411 8d4dbef631cbdbc409ce55df595d7c17 191 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 100 179 1.1E-27 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TMO_3411 8d4dbef631cbdbc409ce55df595d7c17 191 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 148 154 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TMO_3411 8d4dbef631cbdbc409ce55df595d7c17 191 SUPERFAMILY SSF46767 99 180 2.49E-26 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 TMO_3411 8d4dbef631cbdbc409ce55df595d7c17 191 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 29 96 2.5E-7 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TMO_3411 8d4dbef631cbdbc409ce55df595d7c17 191 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 101 180 7.1E-28 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TMO_3411 8d4dbef631cbdbc409ce55df595d7c17 191 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 28 180 37.929 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 TMO_3411 8d4dbef631cbdbc409ce55df595d7c17 191 Gene3D G3DSA:1.10.10.10 98 186 1.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3411 8d4dbef631cbdbc409ce55df595d7c17 191 SUPERFAMILY SSF53155 27 104 3.14E-16 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TMO_3411 8d4dbef631cbdbc409ce55df595d7c17 191 Gene3D G3DSA:3.30.160.70 27 95 1.9E-14 T 14-10-2018 TMO_3003 4c82a652171beccf7e11f25d4c9097a2 153 Pfam PF13801 Heavy-metal resistance 21 144 3.4E-12 T 14-10-2018 IPR025961 Heavy-metal resistance protein TMO_2868 4aef38437a8903d16771194a427e6975 470 SUPERFAMILY SSF103473 6 456 1.13E-26 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2868 4aef38437a8903d16771194a427e6975 470 Pfam PF07690 Major Facilitator Superfamily 5 256 2.4E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_2868 4aef38437a8903d16771194a427e6975 470 Gene3D G3DSA:1.20.1250.20 220 403 3.7E-6 T 14-10-2018 TMO_2868 4aef38437a8903d16771194a427e6975 470 Gene3D G3DSA:1.20.1250.20 1 167 1.1E-17 T 14-10-2018 TMO_d0001 bf7c0b93926a595e07c12f3b2df5d1c3 410 Gene3D G3DSA:1.25.40.10 176 401 7.7E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_d0001 bf7c0b93926a595e07c12f3b2df5d1c3 410 SMART SM00671 220 254 150.0 T 14-10-2018 IPR006597 Sel1-like repeat TMO_d0001 bf7c0b93926a595e07c12f3b2df5d1c3 410 SMART SM00671 259 294 0.01 T 14-10-2018 IPR006597 Sel1-like repeat TMO_d0001 bf7c0b93926a595e07c12f3b2df5d1c3 410 SMART SM00671 187 218 40.0 T 14-10-2018 IPR006597 Sel1-like repeat TMO_d0001 bf7c0b93926a595e07c12f3b2df5d1c3 410 SUPERFAMILY SSF81901 184 293 6.15E-11 T 14-10-2018 TMO_1407 11b8cc118711acb5c71ed9ac787c0300 347 Gene3D G3DSA:3.40.190.170 29 343 2.2E-73 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_1407 11b8cc118711acb5c71ed9ac787c0300 347 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 324 6.1E-48 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_1407 11b8cc118711acb5c71ed9ac787c0300 347 SUPERFAMILY SSF53850 148 286 2.99E-8 T 14-10-2018 TMO_0372 b40f95c7cd9853ca6f733ac68efaea38 462 SUPERFAMILY SSF55874 292 454 7.86E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0372 b40f95c7cd9853ca6f733ac68efaea38 462 SMART SM00388 238 303 2.5E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0372 b40f95c7cd9853ca6f733ac68efaea38 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 453 3.5E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0372 b40f95c7cd9853ca6f733ac68efaea38 462 Gene3D G3DSA:1.10.287.130 190 302 3.1E-15 T 14-10-2018 TMO_0372 b40f95c7cd9853ca6f733ac68efaea38 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 295 1.5E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0372 b40f95c7cd9853ca6f733ac68efaea38 462 Pfam PF08521 Two-component sensor kinase N-terminal 19 162 2.1E-32 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal TMO_0372 b40f95c7cd9853ca6f733ac68efaea38 462 Gene3D G3DSA:3.30.565.10 307 458 1.1E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0372 b40f95c7cd9853ca6f733ac68efaea38 462 SMART SM00387 349 456 6.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0372 b40f95c7cd9853ca6f733ac68efaea38 462 SUPERFAMILY SSF47384 224 298 4.71E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_0372 b40f95c7cd9853ca6f733ac68efaea38 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 3.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0372 b40f95c7cd9853ca6f733ac68efaea38 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 3.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_3534 d728721c1774bdf1829fb78c3d883899 278 Gene3D G3DSA:3.10.580.10 36 185 3.5E-53 T 14-10-2018 TMO_3534 d728721c1774bdf1829fb78c3d883899 278 SMART SM01091 190 271 1.1E-22 T 14-10-2018 IPR005170 Transporter-associated domain TMO_3534 d728721c1774bdf1829fb78c3d883899 278 Pfam PF03471 Transporter associated domain 191 269 2.4E-18 T 14-10-2018 IPR005170 Transporter-associated domain TMO_3534 d728721c1774bdf1829fb78c3d883899 278 Pfam PF00571 CBS domain 132 173 1.7E-4 T 14-10-2018 IPR000644 CBS domain TMO_3534 d728721c1774bdf1829fb78c3d883899 278 Pfam PF00571 CBS domain 55 112 1.4E-7 T 14-10-2018 IPR000644 CBS domain TMO_3534 d728721c1774bdf1829fb78c3d883899 278 SUPERFAMILY SSF56176 190 273 5.73E-19 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_3534 d728721c1774bdf1829fb78c3d883899 278 Gene3D G3DSA:3.30.465.10 186 277 8.2E-24 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TMO_3534 d728721c1774bdf1829fb78c3d883899 278 SUPERFAMILY SSF54631 50 186 1.18E-32 T 14-10-2018 TMO_3534 d728721c1774bdf1829fb78c3d883899 278 SMART SM00116 126 174 8.7 T 14-10-2018 IPR000644 CBS domain TMO_3534 d728721c1774bdf1829fb78c3d883899 278 SMART SM00116 64 113 4.0E-4 T 14-10-2018 IPR000644 CBS domain TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 Gene3D G3DSA:1.10.287.950 428 715 8.8E-57 T 14-10-2018 TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 SMART SM00304 368 421 1.2E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 SMART SM00283 457 711 1.1E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 SUPERFAMILY SSF58104 395 710 3.01E-65 T 14-10-2018 TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 Pfam PF02743 Cache domain 41 330 6.4E-18 T 14-10-2018 IPR033479 Double Cache domain 1 TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 521 680 1.1E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 Gene3D G3DSA:3.30.450.20 212 349 2.8E-10 T 14-10-2018 TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 Gene3D G3DSA:1.10.8.500 369 419 2.5E-16 T 14-10-2018 TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 485 514 3.1E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 584 613 3.1E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 632 661 3.1E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0649 f3bf0e55b564b23232c8e5ff0bc2aa71 717 Pfam PF00672 HAMP domain 369 416 5.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_c0108 24772f673716e086a707c073424b69e1 155 Gene3D G3DSA:1.10.1510.10 1 93 1.2E-16 T 14-10-2018 TMO_c0108 24772f673716e086a707c073424b69e1 155 Gene3D G3DSA:1.10.10.410 94 149 3.2E-7 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal TMO_c0108 24772f673716e086a707c073424b69e1 155 SUPERFAMILY SSF89095 1 149 1.41E-25 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 TMO_c0108 24772f673716e086a707c073424b69e1 155 Pfam PF09424 Yqey-like protein 3 149 1.3E-31 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 TMO_3047 42edbcf5f704ebdc84951ec0ab3dec09 394 Gene3D G3DSA:1.10.540.10 21 126 2.4E-9 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_3047 42edbcf5f704ebdc84951ec0ab3dec09 394 SUPERFAMILY SSF47203 230 367 4.57E-6 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_3047 42edbcf5f704ebdc84951ec0ab3dec09 394 Gene3D G3DSA:2.40.110.10 134 226 5.4E-8 T 14-10-2018 TMO_3047 42edbcf5f704ebdc84951ec0ab3dec09 394 Gene3D G3DSA:1.20.140.10 227 390 4.4E-10 T 14-10-2018 TMO_3047 42edbcf5f704ebdc84951ec0ab3dec09 394 SUPERFAMILY SSF56645 26 233 3.24E-17 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_c0289 e9cd86700c5812d0599648dc36addeaa 328 SUPERFAMILY SSF47616 140 218 1.27E-9 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_c0289 e9cd86700c5812d0599648dc36addeaa 328 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 81 3.1E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_c0289 e9cd86700c5812d0599648dc36addeaa 328 Gene3D G3DSA:3.40.30.110 197 316 1.2E-19 T 14-10-2018 TMO_c0289 e9cd86700c5812d0599648dc36addeaa 328 Gene3D G3DSA:3.40.30.110 1 103 2.5E-37 T 14-10-2018 TMO_c0289 e9cd86700c5812d0599648dc36addeaa 328 SUPERFAMILY SSF52833 3 83 3.02E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0289 e9cd86700c5812d0599648dc36addeaa 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 148 212 1.2E-7 T 14-10-2018 TMO_1228 dfabfe0369cd003f2bd52bfcbdab8cc1 243 SMART SM00448 1 112 2.1E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1228 dfabfe0369cd003f2bd52bfcbdab8cc1 243 SUPERFAMILY SSF52172 1 173 3.42E-41 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1228 dfabfe0369cd003f2bd52bfcbdab8cc1 243 Gene3D G3DSA:1.10.10.10 119 227 6.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1228 dfabfe0369cd003f2bd52bfcbdab8cc1 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 5.5E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_1228 dfabfe0369cd003f2bd52bfcbdab8cc1 243 Pfam PF00072 Response regulator receiver domain 3 113 4.7E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1228 dfabfe0369cd003f2bd52bfcbdab8cc1 243 SMART SM00862 145 221 6.6E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_1228 dfabfe0369cd003f2bd52bfcbdab8cc1 243 Gene3D G3DSA:3.40.50.2300 1 118 2.5E-38 T 14-10-2018 TMO_c0816 b726e8090ddb6e56ac0bbcf2f005fa8e 222 SUPERFAMILY SSF47616 81 214 2.65E-17 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_c0816 b726e8090ddb6e56ac0bbcf2f005fa8e 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 144 206 1.3E-4 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal TMO_c0816 b726e8090ddb6e56ac0bbcf2f005fa8e 222 Gene3D G3DSA:1.20.1050.10 84 211 7.6E-23 T 14-10-2018 TMO_c0816 b726e8090ddb6e56ac0bbcf2f005fa8e 222 SUPERFAMILY SSF52833 1 84 1.12E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0816 b726e8090ddb6e56ac0bbcf2f005fa8e 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 4.8E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_c0816 b726e8090ddb6e56ac0bbcf2f005fa8e 222 Gene3D G3DSA:3.40.30.10 1 83 1.6E-34 T 14-10-2018 TMO_0527 de56cd5ebb72c7c0dd594842a424b895 186 SUPERFAMILY SSF51161 7 142 2.63E-31 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_0527 de56cd5ebb72c7c0dd594842a424b895 186 Gene3D G3DSA:2.160.10.10 1 183 9.9E-47 T 14-10-2018 TMO_0527 de56cd5ebb72c7c0dd594842a424b895 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 0.0018 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_0527 de56cd5ebb72c7c0dd594842a424b895 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 2.8E-6 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_a0208 73fd4c449c3c733b6ba0d849e950bf7d 93 Gene3D G3DSA:1.10.8.1250 13 87 5.9E-9 T 14-10-2018 IPR038296 Antitoxin ParD superfamily TMO_a0208 73fd4c449c3c733b6ba0d849e950bf7d 93 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 8 54 2.7E-5 T 14-10-2018 IPR022789 Antitoxin ParD TMO_a0373 76e8d44f0d531533260d7de4c800c78a 348 Pfam PF13808 DDE_Tnp_1-associated 2 72 1.5E-19 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal TMO_a0373 76e8d44f0d531533260d7de4c800c78a 348 Pfam PF01609 Transposase DDE domain 80 318 1.5E-19 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TMO_b0279 76e8d44f0d531533260d7de4c800c78a 348 Pfam PF13808 DDE_Tnp_1-associated 2 72 1.5E-19 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal TMO_b0279 76e8d44f0d531533260d7de4c800c78a 348 Pfam PF01609 Transposase DDE domain 80 318 1.5E-19 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TMO_2735 5bb2f486c7a3d962627ec5e233ea17c1 304 Pfam PF00005 ABC transporter 40 186 5.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2735 5bb2f486c7a3d962627ec5e233ea17c1 304 SMART SM00382 48 234 8.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2735 5bb2f486c7a3d962627ec5e233ea17c1 304 SUPERFAMILY SSF52540 23 249 1.38E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2735 5bb2f486c7a3d962627ec5e233ea17c1 304 Gene3D G3DSA:3.40.50.300 10 261 1.0E-60 T 14-10-2018 TMO_2735 5bb2f486c7a3d962627ec5e233ea17c1 304 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0192 3ac05995b695441e707a0d4395867eea 450 Gene3D G3DSA:2.40.50.100 5 82 1.0E-20 T 14-10-2018 TMO_b0192 3ac05995b695441e707a0d4395867eea 450 SUPERFAMILY SSF51230 4 97 5.5E-25 T 14-10-2018 IPR011053 Single hybrid motif TMO_b0192 3ac05995b695441e707a0d4395867eea 450 Gene3D G3DSA:4.10.320.10 153 205 8.4E-18 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 TMO_b0192 3ac05995b695441e707a0d4395867eea 450 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 221 447 8.2E-75 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 TMO_b0192 3ac05995b695441e707a0d4395867eea 450 Pfam PF02817 e3 binding domain 165 198 2.5E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 TMO_b0192 3ac05995b695441e707a0d4395867eea 450 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TMO_b0192 3ac05995b695441e707a0d4395867eea 450 Pfam PF00364 Biotin-requiring enzyme 6 77 4.9E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_b0192 3ac05995b695441e707a0d4395867eea 450 SUPERFAMILY SSF52777 211 447 3.69E-77 T 14-10-2018 TMO_b0192 3ac05995b695441e707a0d4395867eea 450 Gene3D G3DSA:3.30.559.10 212 448 6.5E-81 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_b0192 3ac05995b695441e707a0d4395867eea 450 SUPERFAMILY SSF47005 158 203 2.22E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 TMO_0750 94284601a3f83a713cb50d91dc0dd908 275 Gene3D G3DSA:3.10.310.10 118 249 6.9E-16 T 14-10-2018 TMO_0750 94284601a3f83a713cb50d91dc0dd908 275 PIRSF PIRSF016184 2 274 2.0E-25 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_0750 94284601a3f83a713cb50d91dc0dd908 275 Gene3D G3DSA:3.10.310.10 1 102 9.3E-11 T 14-10-2018 TMO_0750 94284601a3f83a713cb50d91dc0dd908 275 SUPERFAMILY SSF54506 10 237 1.92E-26 T 14-10-2018 TMO_0750 94284601a3f83a713cb50d91dc0dd908 275 Pfam PF02567 Phenazine biosynthesis-like protein 10 225 2.8E-15 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_a0168 199f820a855a2c3ace7d3713cece2dd1 270 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 242 263 3.0E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_a0168 199f820a855a2c3ace7d3713cece2dd1 270 Pfam PF00005 ABC transporter 31 192 2.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0168 199f820a855a2c3ace7d3713cece2dd1 270 SUPERFAMILY SSF52540 14 263 1.97E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0168 199f820a855a2c3ace7d3713cece2dd1 270 Gene3D G3DSA:3.40.50.300 13 265 1.3E-59 T 14-10-2018 TMO_a0168 199f820a855a2c3ace7d3713cece2dd1 270 SMART SM00382 40 230 1.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0546 325c4da4497ac3463ee8f03bde697ba7 891 SUPERFAMILY SSF53323 438 642 4.71E-23 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TMO_0546 325c4da4497ac3463ee8f03bde697ba7 891 Gene3D G3DSA:3.40.920.10 435 643 2.4E-16 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TMO_0546 325c4da4497ac3463ee8f03bde697ba7 891 SUPERFAMILY SSF52518 144 330 4.23E-17 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_0546 325c4da4497ac3463ee8f03bde697ba7 891 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 164 273 6.7E-8 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_0546 325c4da4497ac3463ee8f03bde697ba7 891 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 446 633 3.4E-20 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TMO_0546 325c4da4497ac3463ee8f03bde697ba7 891 Gene3D G3DSA:3.40.50.970 149 331 2.9E-7 T 14-10-2018 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 Pfam PF14824 Sirohaem biosynthesis protein central 99 125 2.5E-6 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 Pfam PF13241 Putative NAD(P)-binding 1 95 2.3E-6 T 14-10-2018 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 SUPERFAMILY SSF75615 94 165 8.63E-20 T 14-10-2018 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 Pfam PF10414 Sirohaem synthase dimerisation region 131 163 1.1E-5 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 SUPERFAMILY SSF53790 184 420 1.96E-62 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 Gene3D G3DSA:3.30.950.10 303 436 5.0E-27 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 187 421 8.2E-76 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 PIRSF PIRSF036426 1 434 3.8E-109 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 Gene3D G3DSA:3.40.50.720 1 110 1.0E-13 T 14-10-2018 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 267 300 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 191 396 1.2E-39 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 Gene3D G3DSA:3.40.1010.10 185 302 1.0E-37 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TMO_2152 eae0e3cbd61698ff78edaa2dc1852df8 437 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 2 165 2.4E-28 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_c0680 76dff83718b6fa4466db3fcd1737877d 211 SUPERFAMILY SSF101874 42 207 2.75E-52 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily TMO_c0680 76dff83718b6fa4466db3fcd1737877d 211 Pfam PF04264 YceI-like domain 46 205 7.4E-44 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like TMO_c0680 76dff83718b6fa4466db3fcd1737877d 211 SMART SM00867 45 208 2.2E-62 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like TMO_c0680 76dff83718b6fa4466db3fcd1737877d 211 Gene3D G3DSA:2.40.128.110 45 208 6.5E-52 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily TMO_3468 a72f73671e2ce68804ab72774d814e32 431 Gene3D G3DSA:3.40.50.2300 143 273 2.8E-33 T 14-10-2018 TMO_3468 a72f73671e2ce68804ab72774d814e32 431 Gene3D G3DSA:3.40.50.2300 35 339 2.8E-33 T 14-10-2018 TMO_3468 a72f73671e2ce68804ab72774d814e32 431 Pfam PF13458 Periplasmic binding protein 34 356 1.9E-33 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_3468 a72f73671e2ce68804ab72774d814e32 431 SUPERFAMILY SSF53822 35 355 2.36E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_c0223 b50d1e0d2fc47dd5ab9846175bf8868b 371 Gene3D G3DSA:1.20.1260.10 96 262 1.6E-25 T 14-10-2018 IPR012347 Ferritin-like TMO_c0223 b50d1e0d2fc47dd5ab9846175bf8868b 371 SUPERFAMILY SSF47240 91 329 2.09E-45 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_b0133 f3ef61c6860f34666af32ee0e732b485 56 Pfam PF01609 Transposase DDE domain 2 55 2.6E-6 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TMO_0109 577b77239cf804fb25bc9f8a12d32f09 167 Gene3D G3DSA:3.90.1010.10 6 156 1.8E-51 T 14-10-2018 TMO_0109 577b77239cf804fb25bc9f8a12d32f09 167 SUPERFAMILY SSF82649 9 153 9.16E-47 T 14-10-2018 TMO_0109 577b77239cf804fb25bc9f8a12d32f09 167 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 11 151 2.3E-46 T 14-10-2018 TMO_0109 577b77239cf804fb25bc9f8a12d32f09 167 Pfam PF01592 NifU-like N terminal domain 15 96 1.8E-20 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 TMO_2990 56a7231c175b2ebae6f22be35ba3e593 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 TMO_2990 56a7231c175b2ebae6f22be35ba3e593 218 Hamap MF_00494 Probable transaldolase [tal]. 1 215 43.953 T 14-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 TMO_2990 56a7231c175b2ebae6f22be35ba3e593 218 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 6.6E-85 T 14-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 TMO_2990 56a7231c175b2ebae6f22be35ba3e593 218 Gene3D G3DSA:3.20.20.70 1 217 2.1E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2990 56a7231c175b2ebae6f22be35ba3e593 218 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 212 2.2E-57 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 TMO_2990 56a7231c175b2ebae6f22be35ba3e593 218 SUPERFAMILY SSF51569 1 215 3.45E-75 T 14-10-2018 TMO_c0939 bdb0ccb16053ef3881562f557c802246 101 PIRSF PIRSF028744 1 100 3.8E-38 T 14-10-2018 IPR014056 Addiction module killer protein, predicted TMO_c0939 bdb0ccb16053ef3881562f557c802246 101 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 95 3.9E-38 T 14-10-2018 IPR014056 Addiction module killer protein, predicted TMO_c0939 bdb0ccb16053ef3881562f557c802246 101 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 20 90 1.7E-5 T 14-10-2018 IPR009241 Toxin HigB-like TMO_a0318 6321b15e3f4a3b9cc04e1a15f91b7742 338 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 87 295 8.8E-19 T 14-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 TMO_a0318 6321b15e3f4a3b9cc04e1a15f91b7742 338 Gene3D G3DSA:3.90.15.10 116 241 3.1E-65 T 14-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 TMO_a0318 6321b15e3f4a3b9cc04e1a15f91b7742 338 Gene3D G3DSA:1.10.132.120 93 319 3.1E-65 T 14-10-2018 TMO_a0318 6321b15e3f4a3b9cc04e1a15f91b7742 338 Gene3D G3DSA:3.30.66.10 7 92 1.2E-29 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal TMO_a0318 6321b15e3f4a3b9cc04e1a15f91b7742 338 SUPERFAMILY SSF56349 81 310 3.24E-50 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_a0318 6321b15e3f4a3b9cc04e1a15f91b7742 338 SUPERFAMILY SSF55869 25 85 1.19E-17 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal TMO_1705 189c307af316e64c42703b40b274bcd1 380 Pfam PF00989 PAS fold 28 119 7.0E-9 T 14-10-2018 IPR013767 PAS fold GO:0006355 TMO_1705 189c307af316e64c42703b40b274bcd1 380 SUPERFAMILY SSF55785 29 125 1.48E-8 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1705 189c307af316e64c42703b40b274bcd1 380 SMART SM00091 25 92 0.0076 T 14-10-2018 IPR000014 PAS domain TMO_1705 189c307af316e64c42703b40b274bcd1 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 337 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1705 189c307af316e64c42703b40b274bcd1 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 323 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1705 189c307af316e64c42703b40b274bcd1 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 356 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1705 189c307af316e64c42703b40b274bcd1 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 374 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1705 189c307af316e64c42703b40b274bcd1 380 SMART SM00388 152 216 1.8E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1705 189c307af316e64c42703b40b274bcd1 380 Gene3D G3DSA:3.30.565.10 215 376 1.4E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1705 189c307af316e64c42703b40b274bcd1 380 Gene3D G3DSA:1.10.287.130 156 211 6.1E-10 T 14-10-2018 TMO_1705 189c307af316e64c42703b40b274bcd1 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 260 375 4.0E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1705 189c307af316e64c42703b40b274bcd1 380 SMART SM00387 257 377 1.3E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1705 189c307af316e64c42703b40b274bcd1 380 Gene3D G3DSA:3.30.450.20 27 133 8.5E-10 T 14-10-2018 TMO_1705 189c307af316e64c42703b40b274bcd1 380 Pfam PF00512 His Kinase A (phospho-acceptor) domain 158 211 2.8E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1705 189c307af316e64c42703b40b274bcd1 380 SUPERFAMILY SSF47384 148 211 5.69E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_1705 189c307af316e64c42703b40b274bcd1 380 SUPERFAMILY SSF55874 219 374 9.56E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0706 c8426ef221f8b6e90532af3ff2b2d074 340 Gene3D G3DSA:3.90.25.10 190 311 8.9E-103 T 14-10-2018 TMO_0706 c8426ef221f8b6e90532af3ff2b2d074 340 SUPERFAMILY SSF51735 1 315 4.18E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0706 c8426ef221f8b6e90532af3ff2b2d074 340 Gene3D G3DSA:3.40.50.720 3 303 8.9E-103 T 14-10-2018 TMO_0706 c8426ef221f8b6e90532af3ff2b2d074 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 297 4.6E-64 T 14-10-2018 IPR016040 NAD(P)-binding domain TMO_3159 9a9ea1ee5b1f014cd359e741410b709a 213 SMART SM00882 6 201 7.0E-77 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 TMO_3159 9a9ea1ee5b1f014cd359e741410b709a 213 SUPERFAMILY SSF100950 3 210 7.07E-73 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_3159 9a9ea1ee5b1f014cd359e741410b709a 213 Gene3D G3DSA:3.40.1080.10 2 213 1.0E-101 T 14-10-2018 TMO_3159 9a9ea1ee5b1f014cd359e741410b709a 213 Pfam PF01144 Coenzyme A transferase 7 199 7.2E-40 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 TMO_3159 9a9ea1ee5b1f014cd359e741410b709a 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 5.3E-97 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 Pfam PF00005 ABC transporter 27 184 7.9E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 531 4.3E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 273 6.8E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 SUPERFAMILY SSF52540 6 256 2.66E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 SMART SM00382 35 234 2.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 SMART SM00382 313 504 1.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 Pfam PF00005 ABC transporter 305 454 8.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 Gene3D G3DSA:3.40.50.300 4 277 1.7E-84 T 14-10-2018 TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 Gene3D G3DSA:3.40.50.300 278 547 2.5E-83 T 14-10-2018 TMO_b0265 4db7eef35e4edd1a343c914aa79e48ce 550 SUPERFAMILY SSF52540 279 526 6.44E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0420 516b6405f236aa7fcb3164e388cd8878 263 SMART SM00345 25 86 2.2E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0420 516b6405f236aa7fcb3164e388cd8878 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 8.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0420 516b6405f236aa7fcb3164e388cd8878 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 8.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0420 516b6405f236aa7fcb3164e388cd8878 263 Gene3D G3DSA:1.10.10.10 19 84 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0420 516b6405f236aa7fcb3164e388cd8878 263 SUPERFAMILY SSF46785 17 90 6.12E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0420 516b6405f236aa7fcb3164e388cd8878 263 SMART SM00895 111 240 1.3E-13 T 14-10-2018 IPR011711 GntR, C-terminal TMO_a0420 516b6405f236aa7fcb3164e388cd8878 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 81 7.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0420 516b6405f236aa7fcb3164e388cd8878 263 SUPERFAMILY SSF48008 108 245 1.6E-17 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_a0420 516b6405f236aa7fcb3164e388cd8878 263 Pfam PF07729 FCD domain 111 238 1.8E-18 T 14-10-2018 IPR011711 GntR, C-terminal TMO_a0420 516b6405f236aa7fcb3164e388cd8878 263 Gene3D G3DSA:1.20.120.530 92 254 9.0E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_c0560 e9ac8341506bf0395486d66a07f588bb 196 SUPERFAMILY SSF56524 64 195 2.88E-14 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 TMO_1492 060f6289c3ba6852cdd783c7f21a8b5e 330 SMART SM00829 9 323 2.3E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_1492 060f6289c3ba6852cdd783c7f21a8b5e 330 Pfam PF00107 Zinc-binding dehydrogenase 159 268 8.5E-14 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_1492 060f6289c3ba6852cdd783c7f21a8b5e 330 Gene3D G3DSA:3.90.180.10 19 323 9.9E-122 T 14-10-2018 TMO_1492 060f6289c3ba6852cdd783c7f21a8b5e 330 SUPERFAMILY SSF51735 118 289 1.28E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1492 060f6289c3ba6852cdd783c7f21a8b5e 330 SUPERFAMILY SSF50129 2 146 2.43E-43 T 14-10-2018 IPR011032 GroES-like superfamily TMO_1492 060f6289c3ba6852cdd783c7f21a8b5e 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 7.2E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_1492 060f6289c3ba6852cdd783c7f21a8b5e 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 325 8.2E-135 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI TMO_1492 060f6289c3ba6852cdd783c7f21a8b5e 330 Gene3D G3DSA:3.40.50.720 126 293 9.9E-122 T 14-10-2018 TMO_3352 8777b0dda8c0e93de97c17558047ae8a 276 Gene3D G3DSA:3.40.50.1820 3 275 2.2E-88 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3352 8777b0dda8c0e93de97c17558047ae8a 276 SUPERFAMILY SSF53474 5 275 3.22E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3352 8777b0dda8c0e93de97c17558047ae8a 276 PRINTS PR00412 Epoxide hydrolase signature 29 47 9.6E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_3352 8777b0dda8c0e93de97c17558047ae8a 276 PRINTS PR00412 Epoxide hydrolase signature 49 64 9.6E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_3352 8777b0dda8c0e93de97c17558047ae8a 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 3.3E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3352 8777b0dda8c0e93de97c17558047ae8a 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 3.3E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3352 8777b0dda8c0e93de97c17558047ae8a 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 3.3E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3352 8777b0dda8c0e93de97c17558047ae8a 276 Pfam PF00561 alpha/beta hydrolase fold 23 258 2.8E-27 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3544 4ac657af3658e2c44b53329129679788 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 239 6.6E-14 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 TMO_3544 4ac657af3658e2c44b53329129679788 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 5.5E-48 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 TMO_3544 4ac657af3658e2c44b53329129679788 305 Gene3D G3DSA:3.30.2350.10 1 243 9.7E-79 T 14-10-2018 TMO_3544 4ac657af3658e2c44b53329129679788 305 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 243 295 2.2E-5 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_3544 4ac657af3658e2c44b53329129679788 305 SUPERFAMILY SSF55120 10 239 1.75E-69 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_3544 4ac657af3658e2c44b53329129679788 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 219 2.0E-63 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_3544 4ac657af3658e2c44b53329129679788 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 297 17.223 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_0385 ecc910927c490e74f3441304efdcaf3a 475 SUPERFAMILY SSF51261 187 423 1.52E-72 T 14-10-2018 IPR011055 Duplicated hybrid motif TMO_0385 ecc910927c490e74f3441304efdcaf3a 475 Gene3D G3DSA:3.10.450.350 207 443 8.7E-85 T 14-10-2018 TMO_0385 ecc910927c490e74f3441304efdcaf3a 475 Gene3D G3DSA:2.70.70.10 300 428 8.7E-85 T 14-10-2018 IPR011055 Duplicated hybrid motif TMO_0385 ecc910927c490e74f3441304efdcaf3a 475 Pfam PF01551 Peptidase family M23 328 422 2.6E-36 T 14-10-2018 IPR016047 Peptidase M23 TMO_0385 ecc910927c490e74f3441304efdcaf3a 475 Gene3D G3DSA:3.10.450.350 89 159 9.8E-7 T 14-10-2018 TMO_c0724 4d0008cc9e25829aec05a6011afbca24 247 Pfam PF00487 Fatty acid desaturase 1 227 6.7E-23 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:3.30.565.10 290 476 4.2E-57 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM01231 229 289 7.7E-18 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 6.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 6.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 431 6.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 6.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF47384 230 290 7.85E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF01584 CheW-like domain 482 618 6.6E-21 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF01584 CheW-like domain 647 733 8.4E-7 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF52172 786 907 1.41E-29 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM00073 1 98 6.1E-32 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:3.40.50.12740 787 911 3.1E-29 T 14-10-2018 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF00072 Response regulator receiver domain 790 901 8.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM00260 642 767 0.0016 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM00260 469 616 1.1E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF50341 476 615 5.75E-26 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM00387 334 477 1.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 476 2.0E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:1.20.120.160 1 137 9.4E-35 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF01627 Hpt domain 3 95 7.8E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 230 289 1.2E-12 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF50341 646 763 1.44E-13 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:2.40.50.180 668 725 5.7E-6 T 14-10-2018 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:2.40.50.180 500 571 2.6E-35 T 14-10-2018 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF47226 1 124 6.28E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM00448 788 901 2.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:2.30.30.40 477 611 2.6E-35 T 14-10-2018 TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF55874 293 475 8.64E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1223 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:1.10.287.560 229 289 1.6E-16 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 TMO_3414 12cb26a94accd5dc8141d84086c237d5 136 SUPERFAMILY SSF52833 10 108 4.81E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_3414 12cb26a94accd5dc8141d84086c237d5 136 Gene3D G3DSA:3.40.30.10 10 112 2.2E-29 T 14-10-2018 TMO_b0464 a800a8609b0ccba55c65f4f605884425 248 Gene3D G3DSA:3.40.50.300 3 247 6.1E-75 T 14-10-2018 TMO_b0464 a800a8609b0ccba55c65f4f605884425 248 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0464 a800a8609b0ccba55c65f4f605884425 248 Pfam PF00005 ABC transporter 23 171 5.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0464 a800a8609b0ccba55c65f4f605884425 248 SMART SM00382 32 219 5.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0464 a800a8609b0ccba55c65f4f605884425 248 PIRSF PIRSF039085 4 247 1.5E-103 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TMO_b0464 a800a8609b0ccba55c65f4f605884425 248 SUPERFAMILY SSF52540 10 241 2.42E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0370 139a308eb173de092ef610d9f9d189d9 241 Pfam PF08241 Methyltransferase domain 49 139 6.0E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TMO_c0370 139a308eb173de092ef610d9f9d189d9 241 SUPERFAMILY SSF53335 5 223 5.83E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0370 139a308eb173de092ef610d9f9d189d9 241 Gene3D G3DSA:3.40.50.150 3 224 6.0E-45 T 14-10-2018 TMO_0819 3a98dca5da963824aea95f32747d107e 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 123 5.9E-4 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_0819 3a98dca5da963824aea95f32747d107e 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 46 8.7E-4 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_0819 3a98dca5da963824aea95f32747d107e 201 SUPERFAMILY SSF51161 4 163 3.74E-38 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_0819 3a98dca5da963824aea95f32747d107e 201 Gene3D G3DSA:2.160.10.10 3 171 2.2E-47 T 14-10-2018 TMO_b0346 41278aa334395dc161d99fcad63bc017 336 SUPERFAMILY SSF161098 48 322 1.87E-32 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0346 41278aa334395dc161d99fcad63bc017 336 Gene3D G3DSA:1.10.3720.10 91 334 1.1E-32 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0346 41278aa334395dc161d99fcad63bc017 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 327 2.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0346 41278aa334395dc161d99fcad63bc017 336 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 40 330 9.4E-89 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 TMO_1190 9701755445178a31437137ff827b017f 226 Gene3D G3DSA:3.40.50.850 17 224 9.0E-56 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_1190 9701755445178a31437137ff827b017f 226 SUPERFAMILY SSF52499 2 214 2.35E-55 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_1190 9701755445178a31437137ff827b017f 226 Pfam PF00857 Isochorismatase family 22 207 1.1E-41 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_c0200 bb66067dc75cfc2a739c3224655be794 358 SUPERFAMILY SSF56317 10 303 4.58E-75 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_c0200 bb66067dc75cfc2a739c3224655be794 358 ProSitePatterns PS00921 Nitrilases / cyanide hydratase active site signature. 163 176 - T 14-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 TMO_c0200 bb66067dc75cfc2a739c3224655be794 358 Pfam PF00795 Carbon-nitrogen hydrolase 12 280 4.0E-56 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TMO_c0200 bb66067dc75cfc2a739c3224655be794 358 TIGRFAM TIGR04048 nitrile_sll0784: putative nitrilase, sll0784 family 10 308 1.1E-169 T 14-10-2018 IPR023919 Nitrilase-related, sll0784 TMO_c0200 bb66067dc75cfc2a739c3224655be794 358 Gene3D G3DSA:3.60.110.10 4 289 8.1E-115 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_c0243 834f7de56b5d0615265dab2d022d10b4 488 Gene3D G3DSA:3.40.1190.10 114 341 6.2E-45 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_c0243 834f7de56b5d0615265dab2d022d10b4 488 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 26 483 28.926 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TMO_c0243 834f7de56b5d0615265dab2d022d10b4 488 SUPERFAMILY SSF53623 125 339 3.09E-41 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_c0243 834f7de56b5d0615265dab2d022d10b4 488 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 28 481 3.0E-98 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TMO_c0243 834f7de56b5d0615265dab2d022d10b4 488 Gene3D G3DSA:3.90.190.20 342 479 7.2E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TMO_c0243 834f7de56b5d0615265dab2d022d10b4 488 Pfam PF08245 Mur ligase middle domain 131 322 6.9E-24 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TMO_c0243 834f7de56b5d0615265dab2d022d10b4 488 SUPERFAMILY SSF51735 20 101 1.16E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0243 834f7de56b5d0615265dab2d022d10b4 488 Gene3D G3DSA:3.40.50.720 23 113 7.2E-11 T 14-10-2018 TMO_c0243 834f7de56b5d0615265dab2d022d10b4 488 SUPERFAMILY SSF53244 341 481 1.14E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TMO_c0558 f95812715128e4d95d0537cff126436c 392 Gene3D G3DSA:1.20.1420.20 142 392 5.6E-50 T 14-10-2018 IPR038352 Imelysin-like domain superfamily TMO_c0558 f95812715128e4d95d0537cff126436c 392 Pfam PF13473 Cupredoxin-like domain 23 127 4.1E-15 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain TMO_c0558 f95812715128e4d95d0537cff126436c 392 Pfam PF09375 Imelysin 151 379 1.3E-24 T 14-10-2018 IPR018976 Imelysin-like domain TMO_c0823 daef3a084169f5477e0268a88ee39d93 72 SUPERFAMILY SSF51230 4 71 4.19E-21 T 14-10-2018 IPR011053 Single hybrid motif TMO_c0823 daef3a084169f5477e0268a88ee39d93 72 Gene3D G3DSA:2.40.50.100 5 72 1.4E-24 T 14-10-2018 TMO_c0823 daef3a084169f5477e0268a88ee39d93 72 Pfam PF00364 Biotin-requiring enzyme 11 71 5.2E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_c0875 08f1d8e693750790cdc99887c6fbe0bb 204 SUPERFAMILY SSF52833 4 201 2.04E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0875 08f1d8e693750790cdc99887c6fbe0bb 204 Gene3D G3DSA:3.40.30.10 5 204 6.4E-58 T 14-10-2018 TMO_c0875 08f1d8e693750790cdc99887c6fbe0bb 204 PIRSF PIRSF006386 3 204 5.2E-52 T 14-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TMO_c0875 08f1d8e693750790cdc99887c6fbe0bb 204 Pfam PF01323 DSBA-like thioredoxin domain 9 197 1.4E-34 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TMO_0908 bb2501a269c39d8b63685d3023e5755e 170 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 1 168 32.025 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 TMO_0908 bb2501a269c39d8b63685d3023e5755e 170 PRINTS PR01021 OMPA domain signature 68 90 5.6E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_0908 bb2501a269c39d8b63685d3023e5755e 170 PRINTS PR01021 OMPA domain signature 98 113 5.6E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_0908 bb2501a269c39d8b63685d3023e5755e 170 PRINTS PR01021 OMPA domain signature 113 129 5.6E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_0908 bb2501a269c39d8b63685d3023e5755e 170 Pfam PF00691 OmpA family 67 162 3.5E-24 T 14-10-2018 IPR006665 OmpA-like domain TMO_0908 bb2501a269c39d8b63685d3023e5755e 170 SUPERFAMILY SSF103088 60 168 1.57E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_0908 bb2501a269c39d8b63685d3023e5755e 170 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 65 167 7.5E-43 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 TMO_0908 bb2501a269c39d8b63685d3023e5755e 170 Gene3D G3DSA:3.30.1330.60 44 168 2.9E-38 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_1531 ab829c4b62dfa0b4b80df3493888cf91 437 SUPERFAMILY SSF56176 347 426 2.15E-21 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_1531 ab829c4b62dfa0b4b80df3493888cf91 437 Pfam PF03471 Transporter associated domain 349 426 3.0E-22 T 14-10-2018 IPR005170 Transporter-associated domain TMO_1531 ab829c4b62dfa0b4b80df3493888cf91 437 SUPERFAMILY SSF54631 201 334 1.39E-26 T 14-10-2018 TMO_1531 ab829c4b62dfa0b4b80df3493888cf91 437 Pfam PF01595 Domain of unknown function DUF21 6 198 2.7E-48 T 14-10-2018 IPR002550 CNNM, transmembrane domain TMO_1531 ab829c4b62dfa0b4b80df3493888cf91 437 Gene3D G3DSA:3.30.465.10 345 426 2.6E-28 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TMO_1531 ab829c4b62dfa0b4b80df3493888cf91 437 SMART SM01091 347 427 2.7E-29 T 14-10-2018 IPR005170 Transporter-associated domain TMO_1531 ab829c4b62dfa0b4b80df3493888cf91 437 Gene3D G3DSA:3.10.580.10 194 344 2.5E-39 T 14-10-2018 TMO_1531 ab829c4b62dfa0b4b80df3493888cf91 437 Pfam PF00571 CBS domain 282 332 3.4E-6 T 14-10-2018 IPR000644 CBS domain TMO_1531 ab829c4b62dfa0b4b80df3493888cf91 437 Pfam PF00571 CBS domain 213 270 0.0025 T 14-10-2018 IPR000644 CBS domain TMO_1531 ab829c4b62dfa0b4b80df3493888cf91 437 SMART SM00116 284 332 2.3 T 14-10-2018 IPR000644 CBS domain TMO_1531 ab829c4b62dfa0b4b80df3493888cf91 437 SMART SM00116 222 271 8.9 T 14-10-2018 IPR000644 CBS domain TMO_1366 037e0d8f94da3b69ba7e031bf60735c0 519 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 70 519 9.5E-142 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase TMO_1366 037e0d8f94da3b69ba7e031bf60735c0 519 PIRSF PIRSF028099 7 519 2.4E-181 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase TMO_1366 037e0d8f94da3b69ba7e031bf60735c0 519 SUPERFAMILY SSF46626 377 519 2.64E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_1366 037e0d8f94da3b69ba7e031bf60735c0 519 Gene3D G3DSA:1.10.760.10 381 519 5.4E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_1174 792032a112ce6fd2578332ec36b2dd2b 266 SUPERFAMILY SSF55447 170 265 3.45E-19 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily TMO_1174 792032a112ce6fd2578332ec36b2dd2b 266 SMART SM01092 171 264 5.1E-18 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal TMO_1174 792032a112ce6fd2578332ec36b2dd2b 266 Gene3D G3DSA:3.30.390.50 169 265 7.9E-10 T 14-10-2018 TMO_1174 792032a112ce6fd2578332ec36b2dd2b 266 Gene3D G3DSA:3.30.465.10 55 168 1.6E-37 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TMO_1174 792032a112ce6fd2578332ec36b2dd2b 266 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 167 1.4E-49 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 TMO_1174 792032a112ce6fd2578332ec36b2dd2b 266 Gene3D G3DSA:3.30.43.10 1 54 1.3E-17 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 TMO_1174 792032a112ce6fd2578332ec36b2dd2b 266 SUPERFAMILY SSF56176 1 167 1.06E-54 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_b0515 23a5af5699e7f7a7db8bceb3842926ec 157 SUPERFAMILY SSF51182 10 149 3.75E-31 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_b0515 23a5af5699e7f7a7db8bceb3842926ec 157 Gene3D G3DSA:2.60.120.10 25 155 4.4E-38 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_0836 436ad318da741e997cdc6f8e942cbc8a 371 SUPERFAMILY SSF56059 112 314 1.17E-61 T 14-10-2018 TMO_0836 436ad318da741e997cdc6f8e942cbc8a 371 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 17 364 1.1E-113 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 TMO_0836 436ad318da741e997cdc6f8e942cbc8a 371 Gene3D G3DSA:3.40.50.20 9 116 1.4E-39 T 14-10-2018 TMO_0836 436ad318da741e997cdc6f8e942cbc8a 371 SUPERFAMILY SSF51246 319 366 5.41E-14 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TMO_0836 436ad318da741e997cdc6f8e942cbc8a 371 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 16 368 40.766 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 TMO_0836 436ad318da741e997cdc6f8e942cbc8a 371 Gene3D G3DSA:3.30.470.20 189 371 8.2E-71 T 14-10-2018 TMO_0836 436ad318da741e997cdc6f8e942cbc8a 371 Pfam PF02222 ATP-grasp domain 122 294 1.1E-52 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type TMO_0836 436ad318da741e997cdc6f8e942cbc8a 371 Gene3D G3DSA:3.30.1490.20 117 188 1.6E-22 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_0836 436ad318da741e997cdc6f8e942cbc8a 371 SUPERFAMILY SSF52440 8 109 3.6E-25 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_c0415 15cfb4f1277f1521222826a8d21438d8 322 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 274 316 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_c0415 15cfb4f1277f1521222826a8d21438d8 322 Pfam PF12833 Helix-turn-helix domain 243 321 1.6E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0415 15cfb4f1277f1521222826a8d21438d8 322 SUPERFAMILY SSF46689 273 321 1.16E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0415 15cfb4f1277f1521222826a8d21438d8 322 SMART SM00342 237 320 5.3E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0415 15cfb4f1277f1521222826a8d21438d8 322 Gene3D G3DSA:1.10.10.60 217 322 1.6E-29 T 14-10-2018 TMO_c0415 15cfb4f1277f1521222826a8d21438d8 322 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 320 1.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_c0415 15cfb4f1277f1521222826a8d21438d8 322 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 289 304 1.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_c0415 15cfb4f1277f1521222826a8d21438d8 322 SUPERFAMILY SSF46689 221 271 4.03E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0744 d3bc29f4b9312dea0ef8ed712b7a9b45 353 Pfam PF00691 OmpA family 211 310 9.2E-5 T 14-10-2018 IPR006665 OmpA-like domain TMO_c0744 d3bc29f4b9312dea0ef8ed712b7a9b45 353 SUPERFAMILY SSF103088 207 346 1.83E-8 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_c0744 d3bc29f4b9312dea0ef8ed712b7a9b45 353 Gene3D G3DSA:3.30.1330.60 198 351 1.4E-6 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_1192 3d1975b03feb5d965d4687c074c6cdac 230 Pfam PF00857 Isochorismatase family 27 216 8.1E-45 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_1192 3d1975b03feb5d965d4687c074c6cdac 230 Gene3D G3DSA:3.40.50.850 21 230 3.1E-61 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_1192 3d1975b03feb5d965d4687c074c6cdac 230 SUPERFAMILY SSF52499 12 224 6.8E-58 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_0016 03316b4bc8e3a53db57aee6584ddeb6b 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 250 1.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0016 03316b4bc8e3a53db57aee6584ddeb6b 261 SUPERFAMILY SSF161098 3 255 2.62E-54 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0016 03316b4bc8e3a53db57aee6584ddeb6b 261 Gene3D G3DSA:1.10.3720.10 3 257 4.6E-53 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3042 bd85ac780cf14a50beb8f4dbc34bb209 314 SUPERFAMILY SSF51735 1 292 3.5E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3042 bd85ac780cf14a50beb8f4dbc34bb209 314 Gene3D G3DSA:3.40.50.720 1 306 6.7E-25 T 14-10-2018 TMO_3042 bd85ac780cf14a50beb8f4dbc34bb209 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 231 2.0E-12 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TMO_3066 641727015f7bf9508cee06ba3a7584e2 410 Gene3D G3DSA:3.40.50.2300 28 377 1.0E-91 T 14-10-2018 TMO_3066 641727015f7bf9508cee06ba3a7584e2 410 SUPERFAMILY SSF53822 28 392 7.85E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_3066 641727015f7bf9508cee06ba3a7584e2 410 Gene3D G3DSA:3.40.50.2300 153 383 1.0E-91 T 14-10-2018 TMO_3066 641727015f7bf9508cee06ba3a7584e2 410 Pfam PF13458 Periplasmic binding protein 28 389 3.0E-64 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_b0321 e8e7742a4956ec22e8f93ee55fc04886 209 Gene3D G3DSA:3.60.130.10 1 200 3.7E-69 T 14-10-2018 TMO_b0321 e8e7742a4956ec22e8f93ee55fc04886 209 SUPERFAMILY SSF51197 2 199 1.37E-62 T 14-10-2018 TMO_b0321 e8e7742a4956ec22e8f93ee55fc04886 209 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 197 1.4E-30 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 TMO_1478 3215be6c2f164b73c0140546fe32bb25 316 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 124 191 4.2E-17 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1478 3215be6c2f164b73c0140546fe32bb25 316 SUPERFAMILY SSF46626 208 314 1.49E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_1478 3215be6c2f164b73c0140546fe32bb25 316 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 15 206 3.6E-50 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1478 3215be6c2f164b73c0140546fe32bb25 316 Gene3D G3DSA:1.10.287.90 9 89 3.4E-12 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1478 3215be6c2f164b73c0140546fe32bb25 316 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 142 190 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1478 3215be6c2f164b73c0140546fe32bb25 316 SUPERFAMILY SSF49503 93 244 7.52E-45 T 14-10-2018 IPR008972 Cupredoxin TMO_1478 3215be6c2f164b73c0140546fe32bb25 316 Pfam PF00034 Cytochrome c 216 307 7.4E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1478 3215be6c2f164b73c0140546fe32bb25 316 Gene3D G3DSA:2.60.40.420 95 212 5.2E-38 T 14-10-2018 IPR008972 Cupredoxin TMO_1478 3215be6c2f164b73c0140546fe32bb25 316 SUPERFAMILY SSF81464 11 94 1.42E-9 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1478 3215be6c2f164b73c0140546fe32bb25 316 Gene3D G3DSA:1.10.760.10 213 308 3.9E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_b0553 1a75afa1ebe1c63312b83d838c36d3d6 281 SUPERFAMILY SSF46785 28 105 1.23E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0553 1a75afa1ebe1c63312b83d838c36d3d6 281 Pfam PF07702 UTRA domain 120 256 8.1E-27 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_b0553 1a75afa1ebe1c63312b83d838c36d3d6 281 Gene3D G3DSA:3.40.1410.10 108 268 4.5E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_b0553 1a75afa1ebe1c63312b83d838c36d3d6 281 SUPERFAMILY SSF64288 84 264 2.67E-37 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_b0553 1a75afa1ebe1c63312b83d838c36d3d6 281 SMART SM00345 37 96 3.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0553 1a75afa1ebe1c63312b83d838c36d3d6 281 Pfam PF00392 Bacterial regulatory proteins, gntR family 33 96 7.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0553 1a75afa1ebe1c63312b83d838c36d3d6 281 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 70 86 2.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0553 1a75afa1ebe1c63312b83d838c36d3d6 281 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 70 2.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0553 1a75afa1ebe1c63312b83d838c36d3d6 281 Gene3D G3DSA:1.10.10.10 27 101 6.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0553 1a75afa1ebe1c63312b83d838c36d3d6 281 SMART SM00866 118 257 9.0E-23 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_2126 fdf7d65564ab99518c027dd80318a196 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 433 7.1E-83 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_2126 fdf7d65564ab99518c027dd80318a196 440 PIRSF PIRSF006066 5 438 5.2E-86 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_2126 fdf7d65564ab99518c027dd80318a196 440 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 435 2.2E-92 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_1341 e765fd7f5a07b714687ddedc26ce2d5f 291 Pfam PF01618 MotA/TolQ/ExbB proton channel family 146 247 1.8E-30 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TMO_0454 9cf75b60861f75b869a1205a3fb0fd97 224 Gene3D G3DSA:1.10.472.20 1 123 3.3E-37 T 14-10-2018 TMO_0454 9cf75b60861f75b869a1205a3fb0fd97 224 Gene3D G3DSA:2.30.30.50 130 224 1.4E-35 T 14-10-2018 TMO_0454 9cf75b60861f75b869a1205a3fb0fd97 224 SUPERFAMILY SSF50090 1 224 1.88E-74 T 14-10-2018 IPR008990 Electron transport accessory-like domain superfamily TMO_0454 9cf75b60861f75b869a1205a3fb0fd97 224 TIGRFAM TIGR03888 nitrile_beta: nitrile hydratase, beta subunit 1 224 2.0E-71 T 14-10-2018 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_0454 9cf75b60861f75b869a1205a3fb0fd97 224 PIRSF PIRSF001427 1 224 2.3E-67 T 14-10-2018 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_0454 9cf75b60861f75b869a1205a3fb0fd97 224 Pfam PF02211 Nitrile hydratase beta subunit 1 223 5.3E-79 T 14-10-2018 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_0114 349dd51a9bd07a96201ef70204187d9f 211 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 67 1.1E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0114 349dd51a9bd07a96201ef70204187d9f 211 Pfam PF07729 FCD domain 77 200 1.0E-21 T 14-10-2018 IPR011711 GntR, C-terminal TMO_0114 349dd51a9bd07a96201ef70204187d9f 211 SMART SM00345 9 67 2.9E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0114 349dd51a9bd07a96201ef70204187d9f 211 SUPERFAMILY SSF48008 73 209 2.88E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0114 349dd51a9bd07a96201ef70204187d9f 211 SMART SM00895 77 201 9.5E-16 T 14-10-2018 IPR011711 GntR, C-terminal TMO_0114 349dd51a9bd07a96201ef70204187d9f 211 Gene3D G3DSA:1.10.10.10 3 68 8.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0114 349dd51a9bd07a96201ef70204187d9f 211 Gene3D G3DSA:1.20.120.530 71 211 2.7E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0114 349dd51a9bd07a96201ef70204187d9f 211 SUPERFAMILY SSF46785 6 92 4.86E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0451 8ea2c1e48be51723f8b292d6e0d6b693 226 Gene3D G3DSA:1.20.1050.10 86 198 8.1E-37 T 14-10-2018 TMO_a0451 8ea2c1e48be51723f8b292d6e0d6b693 226 SUPERFAMILY SSF47616 90 206 8.21E-20 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_a0451 8ea2c1e48be51723f8b292d6e0d6b693 226 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 77 1.3E-9 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_a0451 8ea2c1e48be51723f8b292d6e0d6b693 226 SUPERFAMILY SSF52833 2 85 5.49E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_a0451 8ea2c1e48be51723f8b292d6e0d6b693 226 Gene3D G3DSA:3.40.30.10 4 202 8.1E-37 T 14-10-2018 TMO_b0495 4174c7bb6c6b050ec94ce90d5b3dbfa1 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 318 7.9E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_b0495 4174c7bb6c6b050ec94ce90d5b3dbfa1 331 SUPERFAMILY SSF52540 38 303 2.89E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0495 4174c7bb6c6b050ec94ce90d5b3dbfa1 331 Pfam PF00005 ABC transporter 28 185 1.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0495 4174c7bb6c6b050ec94ce90d5b3dbfa1 331 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0495 4174c7bb6c6b050ec94ce90d5b3dbfa1 331 SMART SM00382 36 235 6.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0495 4174c7bb6c6b050ec94ce90d5b3dbfa1 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 301 5.7E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_b0495 4174c7bb6c6b050ec94ce90d5b3dbfa1 331 Gene3D G3DSA:3.40.50.300 5 327 8.2E-91 T 14-10-2018 TMO_1735 2c26b3b33b3f8c8aa9b426b0e89c2379 264 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 71 237 3.2E-25 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 TMO_c0101 c402b9802b1bbb019bc38c890c82ecaf 329 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 183 281 1.6E-7 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_c0101 c402b9802b1bbb019bc38c890c82ecaf 329 Gene3D G3DSA:2.30.110.10 183 310 8.5E-8 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_c0101 c402b9802b1bbb019bc38c890c82ecaf 329 SUPERFAMILY SSF50475 183 303 9.97E-9 T 14-10-2018 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 Gene3D G3DSA:2.30.42.10 396 490 8.1E-19 T 14-10-2018 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 57 485 4.2E-146 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 Pfam PF13365 Trypsin-like peptidase domain 114 250 2.0E-34 T 14-10-2018 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 Gene3D G3DSA:2.30.42.10 287 391 1.7E-22 T 14-10-2018 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 PRINTS PR00834 HtrA/DegQ protease family signature 243 260 2.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 PRINTS PR00834 HtrA/DegQ protease family signature 144 164 2.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 PRINTS PR00834 HtrA/DegQ protease family signature 123 135 2.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 2.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 PRINTS PR00834 HtrA/DegQ protease family signature 186 210 2.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 2.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 SUPERFAMILY SSF50494 55 278 1.12E-64 T 14-10-2018 IPR009003 Peptidase S1, PA clan TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 Gene3D G3DSA:2.40.10.120 56 282 1.2E-79 T 14-10-2018 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 SUPERFAMILY SSF50156 240 383 1.45E-19 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 Pfam PF13180 PDZ domain 291 379 9.4E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 Pfam PF13180 PDZ domain 409 488 3.2E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 SUPERFAMILY SSF50156 397 488 5.39E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 SMART SM00228 289 370 1.9E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_2606 7b44492a466ee7c1702eb7f03bb2205c 490 SMART SM00228 413 481 1.1E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_c0904 8b6591c5b49387b7625d30cb9c391d08 314 Gene3D G3DSA:2.40.30.170 71 287 7.9E-38 T 14-10-2018 TMO_c0904 8b6591c5b49387b7625d30cb9c391d08 314 Gene3D G3DSA:2.40.50.100 80 212 7.9E-38 T 14-10-2018 TMO_c0904 8b6591c5b49387b7625d30cb9c391d08 314 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 72 285 3.5E-32 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_c0904 8b6591c5b49387b7625d30cb9c391d08 314 SUPERFAMILY SSF111369 73 284 1.57E-21 T 14-10-2018 TMO_c0904 8b6591c5b49387b7625d30cb9c391d08 314 Pfam PF13533 Biotin-lipoyl like 84 129 1.4E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TMO_c0904 8b6591c5b49387b7625d30cb9c391d08 314 Pfam PF13437 HlyD family secretion protein 178 277 3.0E-13 T 14-10-2018 TMO_c0904 8b6591c5b49387b7625d30cb9c391d08 314 Gene3D G3DSA:1.10.287.470 114 172 7.9E-38 T 14-10-2018 TMO_2063 3865c295fcbf80d272d80e8bc78a7aed 824 Pfam PF00270 DEAD/DEAH box helicase 41 208 9.4E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_2063 3865c295fcbf80d272d80e8bc78a7aed 824 SMART SM00487 34 241 1.9E-25 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_2063 3865c295fcbf80d272d80e8bc78a7aed 824 Pfam PF08494 DEAD/H associated 609 790 1.2E-45 T 14-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 TMO_2063 3865c295fcbf80d272d80e8bc78a7aed 824 Pfam PF00271 Helicase conserved C-terminal domain 263 359 9.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_2063 3865c295fcbf80d272d80e8bc78a7aed 824 PIRSF PIRSF037307 21 820 3.8E-182 T 14-10-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 TMO_2063 3865c295fcbf80d272d80e8bc78a7aed 824 SUPERFAMILY SSF52540 51 364 5.88E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2063 3865c295fcbf80d272d80e8bc78a7aed 824 Gene3D G3DSA:3.40.50.300 247 387 2.1E-24 T 14-10-2018 TMO_2063 3865c295fcbf80d272d80e8bc78a7aed 824 Gene3D G3DSA:3.40.50.300 30 226 2.7E-44 T 14-10-2018 TMO_2063 3865c295fcbf80d272d80e8bc78a7aed 824 SMART SM00490 283 364 7.8E-14 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_2063 3865c295fcbf80d272d80e8bc78a7aed 824 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 26 816 0.0 T 14-10-2018 IPR026362 DEXH box helicase, DNA ligase-associated TMO_1097 b11b8f2d338845b28f6be46a731a8b0b 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TMO_1097 b11b8f2d338845b28f6be46a731a8b0b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 243 2.6E-29 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TMO_1097 b11b8f2d338845b28f6be46a731a8b0b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 1.2E-46 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TMO_1097 b11b8f2d338845b28f6be46a731a8b0b 261 SUPERFAMILY SSF117143 92 222 1.96E-34 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TMO_1097 b11b8f2d338845b28f6be46a731a8b0b 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 260 1.0E-106 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 TMO_1097 b11b8f2d338845b28f6be46a731a8b0b 261 Pfam PF00460 Flagella basal body rod protein 4 34 5.9E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TMO_1097 b11b8f2d338845b28f6be46a731a8b0b 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 259 1.6E-25 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TMO_1862 16135b0c7eead785fe6a9d41926646bd 340 Gene3D G3DSA:3.30.160.60 297 333 3.4E-17 T 14-10-2018 TMO_1862 16135b0c7eead785fe6a9d41926646bd 340 Gene3D G3DSA:1.10.8.1150 40 113 1.9E-10 T 14-10-2018 TMO_1862 16135b0c7eead785fe6a9d41926646bd 340 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 8 325 33.033 T 14-10-2018 IPR003770 Endolytic murein transglycosylase TMO_1862 16135b0c7eead785fe6a9d41926646bd 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 146 325 1.0E-56 T 14-10-2018 IPR003770 Endolytic murein transglycosylase TMO_1862 16135b0c7eead785fe6a9d41926646bd 340 Pfam PF02618 YceG-like family 47 322 1.5E-78 T 14-10-2018 IPR003770 Endolytic murein transglycosylase TMO_2194 e0da350b5df8887cfa6c97df5024a3bb 106 Pfam PF04956 TrbC/VIRB2 family 5 96 1.6E-26 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 TMO_c0826 e4c8a134e3f747e046a3d9863ddc354e 273 Pfam PF13560 Helix-turn-helix domain 16 77 5.9E-13 T 14-10-2018 TMO_c0826 e4c8a134e3f747e046a3d9863ddc354e 273 SMART SM00530 19 74 8.4E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0826 e4c8a134e3f747e046a3d9863ddc354e 273 Gene3D G3DSA:1.10.260.40 12 86 1.9E-13 T 14-10-2018 TMO_c0826 e4c8a134e3f747e046a3d9863ddc354e 273 SUPERFAMILY SSF47413 13 73 1.53E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_1750 af223e5f7d88a3b1cbfb69e0c912488c 252 Pfam PF00121 Triosephosphate isomerase 8 245 1.1E-77 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_1750 af223e5f7d88a3b1cbfb69e0c912488c 252 SUPERFAMILY SSF51351 5 245 3.01E-83 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_1750 af223e5f7d88a3b1cbfb69e0c912488c 252 Gene3D G3DSA:3.20.20.70 2 249 3.2E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1750 af223e5f7d88a3b1cbfb69e0c912488c 252 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_1750 af223e5f7d88a3b1cbfb69e0c912488c 252 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 8 239 4.0E-50 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_1750 af223e5f7d88a3b1cbfb69e0c912488c 252 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 5 248 54.719 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_3012 cf455733c93997da003c821711b1c23d 330 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 135 316 1.1E-48 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TMO_3012 cf455733c93997da003c821711b1c23d 330 Gene3D G3DSA:3.40.50.720 3 327 8.4E-131 T 14-10-2018 TMO_3012 cf455733c93997da003c821711b1c23d 330 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 113 2.8E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_3012 cf455733c93997da003c821711b1c23d 330 SUPERFAMILY SSF55347 125 317 2.37E-70 T 14-10-2018 TMO_3012 cf455733c93997da003c821711b1c23d 330 Gene3D G3DSA:3.30.360.10 124 313 8.4E-131 T 14-10-2018 TMO_3012 cf455733c93997da003c821711b1c23d 330 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 330 2.0E-112 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TMO_3012 cf455733c93997da003c821711b1c23d 330 SUPERFAMILY SSF51735 1 152 6.32E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3012 cf455733c93997da003c821711b1c23d 330 SMART SM00859 2 118 4.6E-36 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_3012 cf455733c93997da003c821711b1c23d 330 PIRSF PIRSF000148 1 330 7.9E-119 T 14-10-2018 TMO_3012 cf455733c93997da003c821711b1c23d 330 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 330 34.028 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TMO_2733 8066b206f5893c0f7535d70819840dc2 311 SUPERFAMILY SSF46785 14 95 6.7E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2733 8066b206f5893c0f7535d70819840dc2 311 Gene3D G3DSA:1.10.10.10 17 106 1.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2733 8066b206f5893c0f7535d70819840dc2 311 Pfam PF03466 LysR substrate binding domain 102 309 1.2E-37 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2733 8066b206f5893c0f7535d70819840dc2 311 SUPERFAMILY SSF53850 104 310 1.81E-39 T 14-10-2018 TMO_2733 8066b206f5893c0f7535d70819840dc2 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 77 2.4E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2733 8066b206f5893c0f7535d70819840dc2 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 44 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2733 8066b206f5893c0f7535d70819840dc2 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 65 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2733 8066b206f5893c0f7535d70819840dc2 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 54 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2733 8066b206f5893c0f7535d70819840dc2 311 Gene3D G3DSA:3.40.190.10 113 304 5.3E-65 T 14-10-2018 TMO_2733 8066b206f5893c0f7535d70819840dc2 311 Gene3D G3DSA:3.40.190.10 173 277 5.3E-65 T 14-10-2018 TMO_0856 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0856 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0856 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 6.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0856 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0856 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0856 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0856 2d8237103a48bcd7428034547712072a 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 254 9.4E-54 T 14-10-2018 TMO_0856 2d8237103a48bcd7428034547712072a 259 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 258 2.1E-106 T 14-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 TMO_0856 2d8237103a48bcd7428034547712072a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0856 2d8237103a48bcd7428034547712072a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0856 2d8237103a48bcd7428034547712072a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0856 2d8237103a48bcd7428034547712072a 259 Gene3D G3DSA:3.40.50.720 1 259 9.3E-80 T 14-10-2018 TMO_0856 2d8237103a48bcd7428034547712072a 259 SUPERFAMILY SSF51735 4 258 1.67E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0856 2d8237103a48bcd7428034547712072a 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_3074 25ce78fc60336a5d4db6432201be8302 340 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 317 4.2E-39 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_3074 25ce78fc60336a5d4db6432201be8302 340 Gene3D G3DSA:3.40.190.170 24 340 1.5E-79 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 198 212 4.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 160 177 4.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 177 188 4.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 8 26 4.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 89 106 4.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 39 48 4.7E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 Gene3D G3DSA:1.10.287.610 102 153 1.7E-18 T 14-10-2018 TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 227 39.837 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 228 1.5E-94 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 160 184 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 SUPERFAMILY SSF52313 8 231 9.81E-89 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TMO_1782 46b01e00099e4d3d73fe8a5e1f5d5c50 268 Pfam PF00318 Ribosomal protein S2 11 226 1.8E-90 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_d0005 ea903ca71cf3b9fcdbeb8f44f72337fb 336 SMART SM00342 241 323 6.4E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_d0005 ea903ca71cf3b9fcdbeb8f44f72337fb 336 Gene3D G3DSA:3.40.50.880 1 222 5.1E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_d0005 ea903ca71cf3b9fcdbeb8f44f72337fb 336 SUPERFAMILY SSF52317 1 205 1.16E-37 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_d0005 ea903ca71cf3b9fcdbeb8f44f72337fb 336 SUPERFAMILY SSF46689 227 274 2.28E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_d0005 ea903ca71cf3b9fcdbeb8f44f72337fb 336 Gene3D G3DSA:1.10.10.60 223 328 1.2E-20 T 14-10-2018 TMO_d0005 ea903ca71cf3b9fcdbeb8f44f72337fb 336 Pfam PF12833 Helix-turn-helix domain 247 323 2.0E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_d0005 ea903ca71cf3b9fcdbeb8f44f72337fb 336 Pfam PF01965 DJ-1/PfpI family 3 184 1.4E-14 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_3153 71d013a96e4f2ad0a37b0734fa5aecfc 282 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 282 42.065 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TMO_3153 71d013a96e4f2ad0a37b0734fa5aecfc 282 Pfam PF02654 Cobalamin-5-phosphate synthase 31 272 2.2E-40 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TMO_2356 3c783557797558b0b59c146d85eab9fa 748 Gene3D G3DSA:1.10.287.950 366 677 3.6E-43 T 14-10-2018 TMO_2356 3c783557797558b0b59c146d85eab9fa 748 SUPERFAMILY SSF58104 326 648 4.05E-46 T 14-10-2018 TMO_2356 3c783557797558b0b59c146d85eab9fa 748 SMART SM01358 33 277 1.2E-10 T 14-10-2018 IPR032255 Helical bimodular sensor domain TMO_2356 3c783557797558b0b59c146d85eab9fa 748 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 625 1.8E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2356 3c783557797558b0b59c146d85eab9fa 748 SMART SM00283 395 677 1.0E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2356 3c783557797558b0b59c146d85eab9fa 748 Pfam PF00672 HAMP domain 306 355 5.6E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2356 3c783557797558b0b59c146d85eab9fa 748 Gene3D G3DSA:1.20.1480.50 266 363 3.4E-12 T 14-10-2018 TMO_2356 3c783557797558b0b59c146d85eab9fa 748 SMART SM00304 306 359 1.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2356 3c783557797558b0b59c146d85eab9fa 748 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 206 6.4E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2356 3c783557797558b0b59c146d85eab9fa 748 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 493 520 6.4E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_2356 3c783557797558b0b59c146d85eab9fa 748 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 551 6.4E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_3531 7d36b09ea853fd7703559457618e6e0f 467 SMART SM00729 145 370 4.5E-58 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_3531 7d36b09ea853fd7703559457618e6e0f 467 Gene3D G3DSA:3.80.30.20 143 382 6.3E-84 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TMO_3531 7d36b09ea853fd7703559457618e6e0f 467 Pfam PF04055 Radical SAM superfamily 151 328 5.7E-31 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_3531 7d36b09ea853fd7703559457618e6e0f 467 Pfam PF01938 TRAM domain 382 441 3.2E-9 T 14-10-2018 IPR002792 TRAM domain TMO_3531 7d36b09ea853fd7703559457618e6e0f 467 SUPERFAMILY SSF102114 124 375 7.72E-63 T 14-10-2018 TMO_3531 7d36b09ea853fd7703559457618e6e0f 467 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 439 3.6E-145 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 TMO_3531 7d36b09ea853fd7703559457618e6e0f 467 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 441 1.0E-148 T 14-10-2018 TMO_3531 7d36b09ea853fd7703559457618e6e0f 467 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TMO_3531 7d36b09ea853fd7703559457618e6e0f 467 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 443 71.898 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 TMO_3531 7d36b09ea853fd7703559457618e6e0f 467 Pfam PF00919 Uncharacterized protein family UPF0004 4 102 3.3E-29 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TMO_3531 7d36b09ea853fd7703559457618e6e0f 467 Gene3D G3DSA:3.40.50.12160 3 135 6.9E-33 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TMO_1383 90e89dc767a20965e11dc421f6d23b76 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 57 378 5.0E-69 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_1383 90e89dc767a20965e11dc421f6d23b76 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 82 289 6.6E-13 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_1383 90e89dc767a20965e11dc421f6d23b76 382 Gene3D G3DSA:1.10.287.470 115 187 3.8E-70 T 14-10-2018 TMO_1383 90e89dc767a20965e11dc421f6d23b76 382 Gene3D G3DSA:2.40.30.170 66 302 3.8E-70 T 14-10-2018 TMO_1383 90e89dc767a20965e11dc421f6d23b76 382 Gene3D G3DSA:2.40.50.100 81 227 3.8E-70 T 14-10-2018 TMO_1383 90e89dc767a20965e11dc421f6d23b76 382 SUPERFAMILY SSF111369 70 283 8.37E-17 T 14-10-2018 TMO_1383 90e89dc767a20965e11dc421f6d23b76 382 Gene3D G3DSA:2.40.420.20 58 376 3.8E-70 T 14-10-2018 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 1.0E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 273 291 1.0E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 1.0E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.0E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.0E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 1.0E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 1.0E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.0E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.0E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 Gene3D G3DSA:3.50.50.60 119 244 6.9E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 SUPERFAMILY SSF51905 1 313 1.3E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 310 1.5E-119 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 299 5.8E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 Gene3D G3DSA:3.50.50.60 9 304 6.9E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.4E-39 T 14-10-2018 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 1.4E-39 T 14-10-2018 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.4E-39 T 14-10-2018 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.4E-39 T 14-10-2018 TMO_c0116 f07c2ecceafae4d617f258412a03fbf7 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.4E-39 T 14-10-2018 TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 207 8.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 36 53 8.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 8.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 242 262 8.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 226 8.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 178 8.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 SUPERFAMILY SSF51735 34 276 1.03E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 41 274 5.4E-44 T 14-10-2018 TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 188 207 6.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 101 112 6.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 6.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 Gene3D G3DSA:3.40.50.720 5 278 3.3E-64 T 14-10-2018 TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 35 219 9.0E-4 T 14-10-2018 TMO_0600 7f4841b6ee2f80c3f6e9324c590b3810 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 175 203 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_1941 7453b143be1318e63e5bf3d862a82e87 596 Gene3D G3DSA:3.10.310.30 347 470 2.2E-29 T 14-10-2018 TMO_1941 7453b143be1318e63e5bf3d862a82e87 596 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 43 592 8.7E-155 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 TMO_1941 7453b143be1318e63e5bf3d862a82e87 596 Pfam PF01368 DHH family 97 187 1.5E-7 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_1941 7453b143be1318e63e5bf3d862a82e87 596 SUPERFAMILY SSF64182 71 473 2.09E-110 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily TMO_1941 7453b143be1318e63e5bf3d862a82e87 596 Gene3D G3DSA:3.90.1640.30 72 346 1.5E-83 T 14-10-2018 TMO_1941 7453b143be1318e63e5bf3d862a82e87 596 Pfam PF02272 DHHA1 domain 342 465 5.4E-20 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TMO_2040 e8dd24051b39b30cb9e27c941b809ed7 330 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 321 6.1E-131 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 TMO_2040 e8dd24051b39b30cb9e27c941b809ed7 330 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 89 107 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_2040 e8dd24051b39b30cb9e27c941b809ed7 330 Gene3D G3DSA:3.20.20.70 5 247 6.7E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2040 e8dd24051b39b30cb9e27c941b809ed7 330 SUPERFAMILY SSF51395 7 305 2.75E-73 T 14-10-2018 TMO_2040 e8dd24051b39b30cb9e27c941b809ed7 330 Pfam PF01207 Dihydrouridine synthase (Dus) 10 321 4.4E-82 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_2040 e8dd24051b39b30cb9e27c941b809ed7 330 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 324 50.059 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 TMO_2040 e8dd24051b39b30cb9e27c941b809ed7 330 PIRSF PIRSF006621 2 322 7.2E-77 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_2040 e8dd24051b39b30cb9e27c941b809ed7 330 Gene3D G3DSA:1.20.120.1460 249 324 2.4E-22 T 14-10-2018 TMO_a0136 86e5f63c51458aab58a70fa0a59c788e 307 SUPERFAMILY SSF53474 10 299 9.32E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0136 86e5f63c51458aab58a70fa0a59c788e 307 Pfam PF00561 alpha/beta hydrolase fold 31 152 2.1E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_a0136 86e5f63c51458aab58a70fa0a59c788e 307 Gene3D G3DSA:3.40.50.1820 10 302 1.7E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2768 31d4dbe173a2cd62f94f59842c0156c4 299 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 35 245 4.0E-46 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TMO_2768 31d4dbe173a2cd62f94f59842c0156c4 299 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 33 270 5.5E-84 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2768 31d4dbe173a2cd62f94f59842c0156c4 299 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 38 52 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2768 31d4dbe173a2cd62f94f59842c0156c4 299 SUPERFAMILY SSF53790 31 276 6.41E-71 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TMO_2768 31d4dbe173a2cd62f94f59842c0156c4 299 Gene3D G3DSA:3.40.1010.10 26 148 2.1E-39 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TMO_2768 31d4dbe173a2cd62f94f59842c0156c4 299 Gene3D G3DSA:3.30.950.10 149 293 1.2E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TMO_2768 31d4dbe173a2cd62f94f59842c0156c4 299 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 113 146 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_c0464 b8cbd5271edfa26729c40dbc3e523d13 274 SUPERFAMILY SSF53850 41 271 9.31E-54 T 14-10-2018 TMO_c0464 b8cbd5271edfa26729c40dbc3e523d13 274 SMART SM00062 49 269 2.6E-43 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_c0464 b8cbd5271edfa26729c40dbc3e523d13 274 Gene3D G3DSA:3.40.190.10 44 261 7.3E-55 T 14-10-2018 TMO_c0464 b8cbd5271edfa26729c40dbc3e523d13 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 267 2.7E-48 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_c0464 b8cbd5271edfa26729c40dbc3e523d13 274 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 72 85 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site TMO_c0464 b8cbd5271edfa26729c40dbc3e523d13 274 Gene3D G3DSA:3.40.190.10 136 227 7.3E-55 T 14-10-2018 TMO_0587 0eac321ad89735fd7f71bc08a2b3d6d0 114 Gene3D G3DSA:3.30.1390.10 15 114 2.5E-43 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TMO_0587 0eac321ad89735fd7f71bc08a2b3d6d0 114 SUPERFAMILY SSF54736 30 113 4.24E-33 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TMO_0587 0eac321ad89735fd7f71bc08a2b3d6d0 114 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 32 110 1.1E-35 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 TMO_0587 0eac321ad89735fd7f71bc08a2b3d6d0 114 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 20 109 28.877 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS TMO_a0078 bbaf1a54139e2675f5dbc32934c61830 512 Gene3D G3DSA:3.30.1330.60 349 499 3.2E-44 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_a0078 bbaf1a54139e2675f5dbc32934c61830 512 SUPERFAMILY SSF103088 362 494 7.46E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_a0078 bbaf1a54139e2675f5dbc32934c61830 512 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 358 493 2.5E-47 T 14-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain TMO_a0078 bbaf1a54139e2675f5dbc32934c61830 512 Gene3D G3DSA:1.25.40.590 109 267 1.3E-53 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily TMO_a0078 bbaf1a54139e2675f5dbc32934c61830 512 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 111 320 1.4E-70 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU TMO_a0078 bbaf1a54139e2675f5dbc32934c61830 512 Pfam PF00691 OmpA family 390 488 1.2E-14 T 14-10-2018 IPR006665 OmpA-like domain TMO_a0078 bbaf1a54139e2675f5dbc32934c61830 512 Pfam PF09850 Type VI secretion system protein DotU 112 314 7.8E-70 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU TMO_0518 1920b7c319b852770cc642111f92509c 368 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 310 328 8.5E-23 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_0518 1920b7c319b852770cc642111f92509c 368 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 180 204 8.5E-23 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_0518 1920b7c319b852770cc642111f92509c 368 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 149 8.5E-23 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_0518 1920b7c319b852770cc642111f92509c 368 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 251 8.5E-23 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_0518 1920b7c319b852770cc642111f92509c 368 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 35 57 8.5E-23 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_0518 1920b7c319b852770cc642111f92509c 368 Hamap MF_01685 Ferredoxin--NADP reductase. 33 363 41.158 T 14-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 TMO_0518 1920b7c319b852770cc642111f92509c 368 SUPERFAMILY SSF51905 34 344 2.59E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0518 1920b7c319b852770cc642111f92509c 368 Gene3D G3DSA:3.50.50.60 156 280 1.4E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0518 1920b7c319b852770cc642111f92509c 368 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 35 326 7.9E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_0518 1920b7c319b852770cc642111f92509c 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.0E-16 T 14-10-2018 TMO_0518 1920b7c319b852770cc642111f92509c 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 184 202 1.0E-16 T 14-10-2018 TMO_0518 1920b7c319b852770cc642111f92509c 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 36 55 1.0E-16 T 14-10-2018 TMO_0518 1920b7c319b852770cc642111f92509c 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 300 322 1.0E-16 T 14-10-2018 TMO_0518 1920b7c319b852770cc642111f92509c 368 Gene3D G3DSA:3.50.50.60 35 342 1.4E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_2483 41ca95f55edd26f22dc3d0cf83f27df2 573 Pfam PF00361 Proton-conducting membrane transporter 116 387 9.5E-37 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_c0111 3f8578b6ee7a6dc84a82c8e3d0b52497 152 SUPERFAMILY SSF54534 76 150 1.57E-23 T 14-10-2018 TMO_c0111 3f8578b6ee7a6dc84a82c8e3d0b52497 152 SUPERFAMILY SSF46557 1 73 1.57E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TMO_c0111 3f8578b6ee7a6dc84a82c8e3d0b52497 152 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 12 43 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 TMO_c0111 3f8578b6ee7a6dc84a82c8e3d0b52497 152 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 76 150 4.4E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 TMO_c0111 3f8578b6ee7a6dc84a82c8e3d0b52497 152 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 115 131 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 TMO_c0111 3f8578b6ee7a6dc84a82c8e3d0b52497 152 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 150 32.399 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 TMO_c0111 3f8578b6ee7a6dc84a82c8e3d0b52497 152 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 1 149 9.4E-61 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 TMO_c0111 3f8578b6ee7a6dc84a82c8e3d0b52497 152 PIRSF PIRSF006092 1 152 8.2E-54 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 TMO_c0111 3f8578b6ee7a6dc84a82c8e3d0b52497 152 Gene3D G3DSA:1.10.287.180 1 70 9.0E-32 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TMO_c0111 3f8578b6ee7a6dc84a82c8e3d0b52497 152 Pfam PF03449 Transcription elongation factor, N-terminal 1 69 1.4E-32 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 TMO_c0111 3f8578b6ee7a6dc84a82c8e3d0b52497 152 Gene3D G3DSA:3.10.50.30 72 151 4.3E-28 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 TMO_0246 c482b7cbec6ff373b5d0316e7317b1d1 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.7E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0246 c482b7cbec6ff373b5d0316e7317b1d1 308 SUPERFAMILY SSF46785 3 86 2.62E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0246 c482b7cbec6ff373b5d0316e7317b1d1 308 SUPERFAMILY SSF53850 92 299 5.07E-40 T 14-10-2018 TMO_0246 c482b7cbec6ff373b5d0316e7317b1d1 308 Gene3D G3DSA:1.10.10.10 7 92 5.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0246 c482b7cbec6ff373b5d0316e7317b1d1 308 Pfam PF03466 LysR substrate binding domain 91 298 3.0E-37 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0246 c482b7cbec6ff373b5d0316e7317b1d1 308 Gene3D G3DSA:3.40.190.10 103 295 3.7E-55 T 14-10-2018 TMO_0246 c482b7cbec6ff373b5d0316e7317b1d1 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0246 c482b7cbec6ff373b5d0316e7317b1d1 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0246 c482b7cbec6ff373b5d0316e7317b1d1 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0246 c482b7cbec6ff373b5d0316e7317b1d1 308 Gene3D G3DSA:3.40.190.10 163 268 3.7E-55 T 14-10-2018 TMO_1594 69b9c6362b19a909d13ed41e97fe860c 143 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 5 130 1.9E-19 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TMO_1594 69b9c6362b19a909d13ed41e97fe860c 143 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 10 96 1.0E-30 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TMO_1594 69b9c6362b19a909d13ed41e97fe860c 143 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 5 131 22.818 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TMO_1594 69b9c6362b19a909d13ed41e97fe860c 143 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 4 131 1.6E-23 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TMO_1594 69b9c6362b19a909d13ed41e97fe860c 143 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 7 100 2.4E-16 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TMO_1594 69b9c6362b19a909d13ed41e97fe860c 143 SUPERFAMILY SSF56214 4 129 2.09E-23 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TMO_1594 69b9c6362b19a909d13ed41e97fe860c 143 Gene3D G3DSA:3.90.470.20 1 131 1.0E-29 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TMO_2941 f68bb810e84a99bb497eae6490d1f33d 133 SUPERFAMILY SSF51182 6 117 1.36E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_2941 f68bb810e84a99bb497eae6490d1f33d 133 Gene3D G3DSA:2.60.120.10 6 119 2.5E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_2941 f68bb810e84a99bb497eae6490d1f33d 133 Pfam PF07883 Cupin domain 37 103 5.8E-7 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_b0576 314c91564af592261f38f67ad6aed968 300 Gene3D G3DSA:3.40.190.10 93 292 3.1E-56 T 14-10-2018 TMO_b0576 314c91564af592261f38f67ad6aed968 300 SUPERFAMILY SSF46785 2 113 4.79E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0576 314c91564af592261f38f67ad6aed968 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0576 314c91564af592261f38f67ad6aed968 300 Gene3D G3DSA:3.40.190.10 166 267 3.1E-56 T 14-10-2018 TMO_b0576 314c91564af592261f38f67ad6aed968 300 SUPERFAMILY SSF53850 92 296 2.17E-45 T 14-10-2018 TMO_b0576 314c91564af592261f38f67ad6aed968 300 Gene3D G3DSA:1.10.10.10 5 91 3.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0576 314c91564af592261f38f67ad6aed968 300 Pfam PF03466 LysR substrate binding domain 90 295 2.2E-45 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0543 c71714821b47573d0c088dc87a2cd1b3 132 Pfam PF01638 HxlR-like helix-turn-helix 35 120 3.4E-29 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type TMO_c0543 c71714821b47573d0c088dc87a2cd1b3 132 Gene3D G3DSA:1.10.10.10 19 132 1.8E-44 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0543 c71714821b47573d0c088dc87a2cd1b3 132 SUPERFAMILY SSF46785 22 126 3.42E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1356 2d02f55e46c9b0640da24282701c24c6 357 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 198 211 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TMO_1356 2d02f55e46c9b0640da24282701c24c6 357 Pfam PF00155 Aminotransferase class I and II 66 331 8.4E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_1356 2d02f55e46c9b0640da24282701c24c6 357 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 8 333 1.4E-92 T 14-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 TMO_1356 2d02f55e46c9b0640da24282701c24c6 357 Gene3D G3DSA:3.90.1150.10 27 328 7.6E-51 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_1356 2d02f55e46c9b0640da24282701c24c6 357 SUPERFAMILY SSF53383 5 333 3.62E-57 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_1356 2d02f55e46c9b0640da24282701c24c6 357 Gene3D G3DSA:3.40.640.10 38 246 7.6E-51 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0383 ad342bb30885f6a39d1f9e7389c961ae 96 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 90 3.2E-19 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 TMO_c0383 ad342bb30885f6a39d1f9e7389c961ae 96 PIRSF PIRSF032582 1 96 4.3E-41 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 TMO_c0383 ad342bb30885f6a39d1f9e7389c961ae 96 SUPERFAMILY SSF143430 1 89 1.7E-26 T 14-10-2018 TMO_c0383 ad342bb30885f6a39d1f9e7389c961ae 96 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 95 16.451 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 TMO_c0383 ad342bb30885f6a39d1f9e7389c961ae 96 Gene3D G3DSA:3.30.70.240 1 96 2.9E-37 T 14-10-2018 TMO_c0383 ad342bb30885f6a39d1f9e7389c961ae 96 Pfam PF09827 CRISPR associated protein Cas2 1 77 1.4E-23 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 2.4E-58 T 14-10-2018 TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 5.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 Gene3D G3DSA:3.40.50.720 1 247 2.2E-72 T 14-10-2018 TMO_2839 d204744e78a4316af1d895bc4d95ca9d 248 SUPERFAMILY SSF51735 6 247 7.33E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0048 18fbd410920ceab54427ba5812a15269 298 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 236 4.9E-32 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_b0048 18fbd410920ceab54427ba5812a15269 298 Pfam PF13533 Biotin-lipoyl like 47 94 6.6E-15 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TMO_b0048 18fbd410920ceab54427ba5812a15269 298 Pfam PF13437 HlyD family secretion protein 155 241 1.4E-8 T 14-10-2018 TMO_b0048 18fbd410920ceab54427ba5812a15269 298 SUPERFAMILY SSF111369 43 181 9.42E-22 T 14-10-2018 TMO_b0048 18fbd410920ceab54427ba5812a15269 298 Gene3D G3DSA:2.40.30.170 45 286 2.1E-35 T 14-10-2018 TMO_b0048 18fbd410920ceab54427ba5812a15269 298 Gene3D G3DSA:2.40.50.100 46 190 2.1E-35 T 14-10-2018 TMO_b0048 18fbd410920ceab54427ba5812a15269 298 Gene3D G3DSA:1.10.287.470 80 155 2.1E-35 T 14-10-2018 TMO_0074 6730c9dba519f9ee600283ddc344acfc 402 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 94 167 3.6E-6 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TMO_0074 6730c9dba519f9ee600283ddc344acfc 402 SUPERFAMILY SSF56349 88 367 7.36E-41 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_0074 6730c9dba519f9ee600283ddc344acfc 402 Pfam PF00589 Phage integrase family 196 362 3.5E-10 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_0074 6730c9dba519f9ee600283ddc344acfc 402 Gene3D G3DSA:1.10.150.130 83 193 1.0E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal TMO_0074 6730c9dba519f9ee600283ddc344acfc 402 Gene3D G3DSA:1.10.443.10 195 373 5.6E-19 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TMO_2030 dbdb65ab5ec6a50a675279716fc22c85 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 245 3.8E-47 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_2030 dbdb65ab5ec6a50a675279716fc22c85 254 SUPERFAMILY SSF52096 3 250 1.06E-58 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_2030 dbdb65ab5ec6a50a675279716fc22c85 254 Gene3D G3DSA:3.90.226.10 3 254 8.8E-59 T 14-10-2018 TMO_2358 8b9591b4841c59f2b2a5ce63bd62845e 229 Pfam PF00072 Response regulator receiver domain 6 114 4.8E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2358 8b9591b4841c59f2b2a5ce63bd62845e 229 SUPERFAMILY SSF46894 132 226 5.67E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_2358 8b9591b4841c59f2b2a5ce63bd62845e 229 SUPERFAMILY SSF52172 1 123 2.56E-36 T 14-10-2018 IPR011006 CheY-like superfamily TMO_2358 8b9591b4841c59f2b2a5ce63bd62845e 229 Gene3D G3DSA:3.40.50.2300 1 120 5.6E-31 T 14-10-2018 TMO_2358 8b9591b4841c59f2b2a5ce63bd62845e 229 SMART SM00862 150 226 1.3E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_2358 8b9591b4841c59f2b2a5ce63bd62845e 229 SMART SM00448 4 114 7.0E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2358 8b9591b4841c59f2b2a5ce63bd62845e 229 Gene3D G3DSA:1.10.10.10 121 229 4.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2358 8b9591b4841c59f2b2a5ce63bd62845e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.6E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_c0556 849d0d9de42f4a0e19d1ababcc224618 274 Gene3D G3DSA:1.20.1420.20 28 274 8.5E-97 T 14-10-2018 IPR038352 Imelysin-like domain superfamily TMO_c0556 849d0d9de42f4a0e19d1ababcc224618 274 Pfam PF09375 Imelysin 36 267 4.4E-43 T 14-10-2018 IPR018976 Imelysin-like domain TMO_c0674 1edcd97c05671ae33a4e999851b3848d 406 Pfam PF00557 Metallopeptidase family M24 188 388 2.0E-42 T 14-10-2018 IPR000994 Peptidase M24 TMO_c0674 1edcd97c05671ae33a4e999851b3848d 406 Gene3D G3DSA:3.90.230.10 178 405 1.3E-51 T 14-10-2018 TMO_c0674 1edcd97c05671ae33a4e999851b3848d 406 SUPERFAMILY SSF55920 181 404 3.93E-52 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like TMO_d0029 2305e71889749722f4902de179e04e00 341 Gene3D G3DSA:3.40.50.300 1 219 8.9E-66 T 14-10-2018 TMO_d0029 2305e71889749722f4902de179e04e00 341 SUPERFAMILY SSF52540 2 241 3.55E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_d0029 2305e71889749722f4902de179e04e00 341 SMART SM00382 26 209 1.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_d0029 2305e71889749722f4902de179e04e00 341 SUPERFAMILY SSF50331 235 323 3.0E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_d0029 2305e71889749722f4902de179e04e00 341 Pfam PF08402 TOBE domain 270 330 2.5E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_d0029 2305e71889749722f4902de179e04e00 341 Pfam PF00005 ABC transporter 18 159 3.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_d0029 2305e71889749722f4902de179e04e00 341 Gene3D G3DSA:2.40.50.940 220 276 5.0E-5 T 14-10-2018 TMO_d0029 2305e71889749722f4902de179e04e00 341 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_d0029 2305e71889749722f4902de179e04e00 341 Gene3D G3DSA:2.40.50.140 277 320 5.0E-5 T 14-10-2018 TMO_2200 b789a8c023d3c3256b7b43bea3886415 172 SUPERFAMILY SSF51306 33 169 3.5E-27 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TMO_2200 b789a8c023d3c3256b7b43bea3886415 172 Pfam PF10502 Signal peptidase, peptidase S26 31 168 1.5E-50 T 14-10-2018 IPR019533 Peptidase S26 TMO_2200 b789a8c023d3c3256b7b43bea3886415 172 Gene3D G3DSA:2.10.109.10 54 169 2.1E-8 T 14-10-2018 TMO_3273 5d5db087c3f170561c82ed28ae8bf8fa 128 SUPERFAMILY SSF81343 5 123 2.94E-37 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3273 5d5db087c3f170561c82ed28ae8bf8fa 128 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 7 31 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3273 5d5db087c3f170561c82ed28ae8bf8fa 128 Gene3D G3DSA:1.20.1300.10 1 125 4.5E-46 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3273 5d5db087c3f170561c82ed28ae8bf8fa 128 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 6 124 7.5E-42 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3273 5d5db087c3f170561c82ed28ae8bf8fa 128 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 117 1.3E-32 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3273 5d5db087c3f170561c82ed28ae8bf8fa 128 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 82 95 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3273 5d5db087c3f170561c82ed28ae8bf8fa 128 PIRSF PIRSF000178 1 126 2.0E-42 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3412 520ea906c8d309e86ddff6134232f6ff 688 SUPERFAMILY SSF52833 3 142 6.33E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_3412 520ea906c8d309e86ddff6134232f6ff 688 SUPERFAMILY SSF48208 191 542 2.62E-54 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TMO_3412 520ea906c8d309e86ddff6134232f6ff 688 PIRSF PIRSF006402 1 686 2.3E-191 T 14-10-2018 IPR024705 Spermatogenesis-associated protein 20 TMO_3412 520ea906c8d309e86ddff6134232f6ff 688 Pfam PF03190 Protein of unknown function, DUF255 4 161 2.6E-72 T 14-10-2018 IPR004879 Domain of unknown function DUF255 TMO_3412 520ea906c8d309e86ddff6134232f6ff 688 Gene3D G3DSA:1.50.10.20 421 585 2.7E-6 T 14-10-2018 TMO_3412 520ea906c8d309e86ddff6134232f6ff 688 Gene3D G3DSA:3.40.30.10 2 170 8.7E-65 T 14-10-2018 TMO_1199 5b1b762a3680110374884293912b74ba 227 Gene3D G3DSA:3.90.550.10 2 224 2.9E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_1199 5b1b762a3680110374884293912b74ba 227 SUPERFAMILY SSF53448 7 217 2.25E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_1199 5b1b762a3680110374884293912b74ba 227 Pfam PF12804 MobA-like NTP transferase domain 9 172 2.5E-22 T 14-10-2018 IPR025877 MobA-like NTP transferase TMO_1199 5b1b762a3680110374884293912b74ba 227 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 220 21.67 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 TMO_2427 c80e322cf4452454566c8b03397154cd 236 SMART SM00418 13 92 1.2E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_2427 c80e322cf4452454566c8b03397154cd 236 SUPERFAMILY SSF46785 9 92 1.59E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2427 c80e322cf4452454566c8b03397154cd 236 Pfam PF12840 Helix-turn-helix domain 12 72 8.2E-14 T 14-10-2018 TMO_2427 c80e322cf4452454566c8b03397154cd 236 Gene3D G3DSA:1.10.10.10 6 101 2.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0226 a5a66c599875c06428aa72ca49c7c522 348 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 291 333 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_a0226 a5a66c599875c06428aa72ca49c7c522 348 SMART SM00342 255 337 2.7E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0226 a5a66c599875c06428aa72ca49c7c522 348 Gene3D G3DSA:1.10.10.60 236 342 1.2E-24 T 14-10-2018 TMO_a0226 a5a66c599875c06428aa72ca49c7c522 348 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 27 211 5.3E-22 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal TMO_a0226 a5a66c599875c06428aa72ca49c7c522 348 Pfam PF12833 Helix-turn-helix domain 262 338 7.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0226 a5a66c599875c06428aa72ca49c7c522 348 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 3.4E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_a0226 a5a66c599875c06428aa72ca49c7c522 348 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 3.4E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_a0226 a5a66c599875c06428aa72ca49c7c522 348 SUPERFAMILY SSF46689 290 340 7.17E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2674 fa322a720adc567691a98716e7fda5c5 607 SUPERFAMILY SSF48435 45 407 3.66E-16 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 TMO_2674 fa322a720adc567691a98716e7fda5c5 607 Gene3D G3DSA:1.10.530.10 430 583 1.6E-39 T 14-10-2018 TMO_2674 fa322a720adc567691a98716e7fda5c5 607 SUPERFAMILY SSF53955 433 578 7.29E-40 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_2674 fa322a720adc567691a98716e7fda5c5 607 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 442 470 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 TMO_2674 fa322a720adc567691a98716e7fda5c5 607 Pfam PF01464 Transglycosylase SLT domain 432 534 1.6E-24 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 TMO_1111 5ffb45ce49bfd588c1976e31831d4e94 208 SUPERFAMILY SSF46689 2 82 5.03E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1111 5ffb45ce49bfd588c1976e31831d4e94 208 Gene3D G3DSA:1.10.357.10 11 197 1.5E-55 T 14-10-2018 TMO_1111 5ffb45ce49bfd588c1976e31831d4e94 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 8.8E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1111 5ffb45ce49bfd588c1976e31831d4e94 208 Pfam PF16925 Bacterial transcriptional repressor C-terminal 91 193 4.5E-21 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_1111 5ffb45ce49bfd588c1976e31831d4e94 208 SUPERFAMILY SSF48498 83 193 2.41E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1111 5ffb45ce49bfd588c1976e31831d4e94 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1111 5ffb45ce49bfd588c1976e31831d4e94 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 191 204 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 568 588 3.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 551 568 3.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 380 389 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 SUPERFAMILY SSF46689 507 588 1.3E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 SMART SM00382 187 331 1.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 Gene3D G3DSA:3.40.50.300 159 338 7.3E-62 T 14-10-2018 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 SUPERFAMILY SSF52172 26 211 1.57E-40 T 14-10-2018 IPR011006 CheY-like superfamily TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 Gene3D G3DSA:1.10.10.60 539 583 1.4E-14 T 14-10-2018 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 Gene3D G3DSA:3.40.50.2300 23 150 3.5E-33 T 14-10-2018 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 Pfam PF00158 Sigma-54 interaction domain 167 333 4.4E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 Pfam PF00072 Response regulator receiver domain 28 139 3.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 SMART SM00448 26 139 1.3E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 Gene3D G3DSA:1.10.8.60 339 417 6.1E-24 T 14-10-2018 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 Pfam PF02954 Bacterial regulatory protein, Fis family 545 583 2.7E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 SUPERFAMILY SSF52540 166 410 3.05E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0307 759f7761fa9637cacfebde7484f64ab4 591 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 253 268 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_0657 e8ace010917449fb5fc31b55266a4404 282 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 185 203 1.1E-8 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 TMO_0657 e8ace010917449fb5fc31b55266a4404 282 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 217 236 1.1E-8 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 TMO_0657 e8ace010917449fb5fc31b55266a4404 282 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 80 102 1.1E-8 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 TMO_0657 e8ace010917449fb5fc31b55266a4404 282 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 24 242 7.2E-44 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 TMO_0657 e8ace010917449fb5fc31b55266a4404 282 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 123 134 - T 14-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 TMO_0657 e8ace010917449fb5fc31b55266a4404 282 Gene3D G3DSA:1.10.800.10 2 279 3.8E-101 T 14-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 TMO_0657 e8ace010917449fb5fc31b55266a4404 282 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 15 262 2.4E-104 T 14-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 TMO_0657 e8ace010917449fb5fc31b55266a4404 282 SUPERFAMILY SSF56534 11 270 6.15E-97 T 14-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily TMO_b0241 9189b9a4b72aa808e24b79d1ea124b60 271 SUPERFAMILY SSF52096 10 271 5.73E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_b0241 9189b9a4b72aa808e24b79d1ea124b60 271 Gene3D G3DSA:1.10.12.10 212 271 3.3E-17 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_b0241 9189b9a4b72aa808e24b79d1ea124b60 271 Gene3D G3DSA:3.90.226.10 9 211 3.9E-65 T 14-10-2018 TMO_b0241 9189b9a4b72aa808e24b79d1ea124b60 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 270 2.2E-51 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_3038 e2a27c9122e82eb6c75f852cd8d975c6 403 Pfam PF00355 Rieske [2Fe-2S] domain 72 150 6.4E-16 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_3038 e2a27c9122e82eb6c75f852cd8d975c6 403 Gene3D G3DSA:2.102.10.10 66 189 7.5E-42 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_3038 e2a27c9122e82eb6c75f852cd8d975c6 403 SUPERFAMILY SSF50022 43 182 4.19E-35 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_3038 e2a27c9122e82eb6c75f852cd8d975c6 403 Gene3D G3DSA:3.90.380.10 271 395 1.5E-6 T 14-10-2018 TMO_3038 e2a27c9122e82eb6c75f852cd8d975c6 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 104 124 1.8E-12 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_3038 e2a27c9122e82eb6c75f852cd8d975c6 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 83 98 1.8E-12 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_3038 e2a27c9122e82eb6c75f852cd8d975c6 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 126 146 1.8E-12 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_3038 e2a27c9122e82eb6c75f852cd8d975c6 403 SUPERFAMILY SSF55961 188 394 3.85E-29 T 14-10-2018 TMO_3038 e2a27c9122e82eb6c75f852cd8d975c6 403 Gene3D G3DSA:3.90.380.10 50 246 7.5E-42 T 14-10-2018 TMO_3038 e2a27c9122e82eb6c75f852cd8d975c6 403 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 207 390 7.9E-23 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 Pfam PF00809 Pterin binding enzyme 346 579 4.1E-39 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 Gene3D G3DSA:1.10.1240.10 626 713 2.2E-30 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 Pfam PF02310 B12 binding domain 722 829 2.6E-21 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 923 1169 1.9E-42 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 TIGRFAM TIGR02082 metH: methionine synthase 10 1169 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 SUPERFAMILY SSF82282 2 385 7.06E-104 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 PIRSF PIRSF000381 1 1169 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 SUPERFAMILY SSF47644 631 714 2.75E-24 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 Gene3D G3DSA:3.40.50.280 718 865 1.8E-42 T 14-10-2018 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 Gene3D G3DSA:3.20.20.20 334 625 4.2E-97 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 SUPERFAMILY SSF52242 718 847 5.49E-38 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 SUPERFAMILY SSF51717 344 611 3.4E-73 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 Gene3D G3DSA:3.10.196.10 906 1169 5.4E-58 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 Pfam PF02574 Homocysteine S-methyltransferase 13 303 2.6E-63 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 Pfam PF02607 B12 binding domain 636 709 1.1E-25 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 SUPERFAMILY SSF56507 896 1169 4.32E-91 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 Gene3D G3DSA:3.20.20.330 2 313 6.7E-90 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 SMART SM01018 634 716 2.0E-40 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TMO_0826 b96f617290e8bbe928ad9ae7eec52d14 1169 Gene3D G3DSA:1.10.288.10 921 979 5.4E-58 T 14-10-2018 TMO_0103 fed78277fb8d318a0f27d46e39a0e96f 690 Pfam PF07940 Heparinase II/III-like protein 398 633 9.6E-46 T 14-10-2018 IPR012480 Heparinase II/III-like GO:0016829 TMO_0103 fed78277fb8d318a0f27d46e39a0e96f 690 Gene3D G3DSA:1.50.10.100 129 389 4.2E-17 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 TMO_a0258 11bdbe0fd504fded351e6a8a291b6bc0 356 Pfam PF13407 Periplasmic binding protein domain 31 307 2.8E-59 T 14-10-2018 IPR025997 Periplasmic binding protein TMO_a0258 11bdbe0fd504fded351e6a8a291b6bc0 356 Gene3D G3DSA:3.40.50.2300 31 330 2.2E-129 T 14-10-2018 TMO_a0258 11bdbe0fd504fded351e6a8a291b6bc0 356 Gene3D G3DSA:3.40.50.2300 133 351 2.2E-129 T 14-10-2018 TMO_a0258 11bdbe0fd504fded351e6a8a291b6bc0 356 SUPERFAMILY SSF53822 30 343 9.64E-64 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 Gene3D G3DSA:3.30.70.240 389 483 2.5E-128 T 14-10-2018 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 600 3.9E-276 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 SUPERFAMILY SSF52540 4 206 3.41E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 Gene3D G3DSA:2.40.50.250 484 600 2.5E-128 T 14-10-2018 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 4.0E-54 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 SMART SM00838 397 485 0.0028 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 152 8.1E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 Pfam PF00679 Elongation factor G C-terminus 398 481 1.3E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 SUPERFAMILY SSF50447 151 297 3.93E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 SUPERFAMILY SSF54980 302 387 4.65E-12 T 14-10-2018 IPR035647 EF-G domain III/V-like TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 SUPERFAMILY SSF54980 400 514 2.4E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 Pfam PF03144 Elongation factor Tu domain 2 218 288 2.1E-11 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 Gene3D G3DSA:2.40.30.10 198 299 3.6E-29 T 14-10-2018 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 Gene3D G3DSA:3.40.50.300 2 197 3.5E-63 T 14-10-2018 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 PRINTS PR00315 GTP-binding elongation factor signature 122 131 5.6E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 PRINTS PR00315 GTP-binding elongation factor signature 50 58 5.6E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 PRINTS PR00315 GTP-binding elongation factor signature 86 97 5.6E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 PRINTS PR00315 GTP-binding elongation factor signature 6 19 5.6E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 PRINTS PR00315 GTP-binding elongation factor signature 70 80 5.6E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_3452 818ab3aa62db0469e8cdbdb2d373835d 608 Gene3D G3DSA:3.30.70.870 306 591 2.5E-128 T 14-10-2018 TMO_b0593 0f89c94dbd577a31eabfe4c9d2424dbc 316 Pfam PF01965 DJ-1/PfpI family 7 170 2.8E-17 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_b0593 0f89c94dbd577a31eabfe4c9d2424dbc 316 SMART SM00342 224 307 2.4E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0593 0f89c94dbd577a31eabfe4c9d2424dbc 316 SUPERFAMILY SSF52317 3 190 4.38E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_b0593 0f89c94dbd577a31eabfe4c9d2424dbc 316 Gene3D G3DSA:1.10.10.60 266 313 6.0E-14 T 14-10-2018 TMO_b0593 0f89c94dbd577a31eabfe4c9d2424dbc 316 Gene3D G3DSA:3.40.50.880 3 203 6.4E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_b0593 0f89c94dbd577a31eabfe4c9d2424dbc 316 Pfam PF12833 Helix-turn-helix domain 230 308 3.4E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0593 0f89c94dbd577a31eabfe4c9d2424dbc 316 SUPERFAMILY SSF46689 261 310 1.59E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0593 0f89c94dbd577a31eabfe4c9d2424dbc 316 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 261 303 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_b0593 0f89c94dbd577a31eabfe4c9d2424dbc 316 SUPERFAMILY SSF46689 211 257 6.72E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0593 0f89c94dbd577a31eabfe4c9d2424dbc 316 Gene3D G3DSA:1.10.10.60 216 265 2.2E-13 T 14-10-2018 TMO_2361 5d5722ec4bef1fb7799574bd2ac5b80c 471 Pfam PF02321 Outer membrane efflux protein 74 246 2.1E-21 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_2361 5d5722ec4bef1fb7799574bd2ac5b80c 471 Pfam PF02321 Outer membrane efflux protein 286 463 1.1E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_2361 5d5722ec4bef1fb7799574bd2ac5b80c 471 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 464 3.7E-82 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 TMO_2361 5d5722ec4bef1fb7799574bd2ac5b80c 471 SUPERFAMILY SSF56954 2 464 2.62E-90 T 14-10-2018 TMO_2361 5d5722ec4bef1fb7799574bd2ac5b80c 471 Gene3D G3DSA:1.20.1600.10 64 464 1.4E-106 T 14-10-2018 TMO_2361 5d5722ec4bef1fb7799574bd2ac5b80c 471 Gene3D G3DSA:2.20.200.10 111 354 1.4E-106 T 14-10-2018 TMO_1142 08536f5a675256ceaebf2e92fc10e111 202 Gene3D G3DSA:1.10.10.60 1 65 1.8E-24 T 14-10-2018 TMO_1142 08536f5a675256ceaebf2e92fc10e111 202 SUPERFAMILY SSF48498 78 191 1.64E-26 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1142 08536f5a675256ceaebf2e92fc10e111 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 2.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1142 08536f5a675256ceaebf2e92fc10e111 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_1142 08536f5a675256ceaebf2e92fc10e111 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1142 08536f5a675256ceaebf2e92fc10e111 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1142 08536f5a675256ceaebf2e92fc10e111 202 SUPERFAMILY SSF46689 1 66 9.23E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1142 08536f5a675256ceaebf2e92fc10e111 202 Gene3D G3DSA:1.10.357.10 71 195 1.5E-26 T 14-10-2018 TMO_c0518 47e6fb8eb78d70a9216976df9c379fd7 1049 Gene3D G3DSA:3.30.40.60 516 640 2.4E-9 T 14-10-2018 TMO_c0518 47e6fb8eb78d70a9216976df9c379fd7 1049 Hamap MF_01480 CRISPR-associated endonuclease Cas9 [cas9]. 4 1040 14.353 T 14-10-2018 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 TMO_c0518 47e6fb8eb78d70a9216976df9c379fd7 1049 Gene3D G3DSA:3.30.420.10 641 766 2.4E-8 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_c0518 47e6fb8eb78d70a9216976df9c379fd7 1049 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 7 761 4.9E-110 T 14-10-2018 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 TMO_c0518 47e6fb8eb78d70a9216976df9c379fd7 1049 Pfam PF13395 HNH endonuclease 564 619 1.6E-21 T 14-10-2018 IPR003615 HNH nuclease TMO_0768 46a8910e67e7d210f3b09c8fbb0a876a 151 Gene3D G3DSA:3.40.630.30 8 150 9.9E-36 T 14-10-2018 TMO_0768 46a8910e67e7d210f3b09c8fbb0a876a 151 Pfam PF13673 Acetyltransferase (GNAT) domain 57 134 5.9E-15 T 14-10-2018 IPR000182 GNAT domain TMO_0768 46a8910e67e7d210f3b09c8fbb0a876a 151 SUPERFAMILY SSF55729 9 150 8.89E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_3265 b9016f030ca5ad3a607f550f4f210f05 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 225 6.3E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_3265 b9016f030ca5ad3a607f550f4f210f05 393 Gene3D G3DSA:1.10.540.10 1 123 4.8E-29 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_3265 b9016f030ca5ad3a607f550f4f210f05 393 Gene3D G3DSA:2.40.110.10 128 241 1.0E-34 T 14-10-2018 TMO_3265 b9016f030ca5ad3a607f550f4f210f05 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 123 1.6E-21 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_3265 b9016f030ca5ad3a607f550f4f210f05 393 SUPERFAMILY SSF47203 238 387 1.39E-12 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_3265 b9016f030ca5ad3a607f550f4f210f05 393 Gene3D G3DSA:1.20.140.10 242 392 5.5E-21 T 14-10-2018 TMO_3265 b9016f030ca5ad3a607f550f4f210f05 393 SUPERFAMILY SSF56645 2 250 2.23E-68 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_3265 b9016f030ca5ad3a607f550f4f210f05 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 385 3.4E-12 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 21 431 5.8E-240 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 368 384 2.7E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 249 277 2.7E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 388 402 2.7E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 173 186 2.7E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 227 242 2.7E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 304 324 2.7E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 ProSitePatterns PS00480 Citrate synthase signature. 311 323 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 Pfam PF00285 Citrate synthase, C-terminal domain 54 420 2.8E-136 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 Gene3D G3DSA:2.20.28.60 6 58 4.8E-19 T 14-10-2018 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 SUPERFAMILY SSF48256 14 437 1.57E-171 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 Gene3D G3DSA:1.10.580.10 65 420 1.1E-148 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 TMO_3028 5962b209f486dbbab4028795e3553fa1 437 PIRSF PIRSF001369 45 437 7.8E-172 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type TMO_3028 5962b209f486dbbab4028795e3553fa1 437 Gene3D G3DSA:1.10.230.10 276 385 1.1E-148 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain TMO_3383 a7566ce78cbd737d55ea764bfdbf65ef 493 Pfam PF11870 Domain of unknown function (DUF3390) 398 469 8.8E-8 T 14-10-2018 IPR024569 4Fe-4S binding protein, C-terminal TMO_3383 a7566ce78cbd737d55ea764bfdbf65ef 493 Pfam PF02589 LUD domain 68 296 2.0E-59 T 14-10-2018 IPR003741 LUD domain TMO_3383 a7566ce78cbd737d55ea764bfdbf65ef 493 Pfam PF13183 4Fe-4S dicluster domain 311 378 2.9E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_3383 a7566ce78cbd737d55ea764bfdbf65ef 493 SUPERFAMILY SSF100950 63 297 7.11E-45 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_3383 a7566ce78cbd737d55ea764bfdbf65ef 493 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 314 325 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_3383 a7566ce78cbd737d55ea764bfdbf65ef 493 SUPERFAMILY SSF46548 275 395 2.38E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_3383 a7566ce78cbd737d55ea764bfdbf65ef 493 Gene3D G3DSA:3.40.50.10420 133 296 8.9E-17 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily TMO_3383 a7566ce78cbd737d55ea764bfdbf65ef 493 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 17 455 5.1E-149 T 14-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 TMO_0023 5dd7f5e1db3c056a809f6576b8aa282b 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 277 9.8E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0023 5dd7f5e1db3c056a809f6576b8aa282b 449 Gene3D G3DSA:3.30.565.10 288 436 3.4E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0023 5dd7f5e1db3c056a809f6576b8aa282b 449 SMART SM00388 220 283 1.2E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0023 5dd7f5e1db3c056a809f6576b8aa282b 449 SUPERFAMILY SSF55874 285 434 1.83E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0023 5dd7f5e1db3c056a809f6576b8aa282b 449 Gene3D G3DSA:1.10.287.130 196 286 1.7E-8 T 14-10-2018 TMO_0023 5dd7f5e1db3c056a809f6576b8aa282b 449 SUPERFAMILY SSF47384 213 277 1.82E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_0023 5dd7f5e1db3c056a809f6576b8aa282b 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 430 4.4E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0023 5dd7f5e1db3c056a809f6576b8aa282b 449 SMART SM00387 329 435 4.6E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_3389 f88ab98907a8c62c6d728137a2b697b6 633 Gene3D G3DSA:3.60.20.10 81 227 2.5E-14 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_3389 f88ab98907a8c62c6d728137a2b697b6 633 SUPERFAMILY SSF52402 234 552 1.12E-28 T 14-10-2018 TMO_3389 f88ab98907a8c62c6d728137a2b697b6 633 SUPERFAMILY SSF56235 92 209 1.97E-14 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_3389 f88ab98907a8c62c6d728137a2b697b6 633 Pfam PF13537 Glutamine amidotransferase domain 102 159 3.0E-6 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TMO_3389 f88ab98907a8c62c6d728137a2b697b6 633 Pfam PF00733 Asparagine synthase 242 610 2.4E-31 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_1691 c28f1fa9fd3a46848b2bc58e38d134a6 238 Pfam PF03796 DnaB-like helicase C terminal domain 121 211 5.0E-8 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 TMO_1691 c28f1fa9fd3a46848b2bc58e38d134a6 238 Pfam PF03796 DnaB-like helicase C terminal domain 58 114 3.5E-9 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 TMO_1691 c28f1fa9fd3a46848b2bc58e38d134a6 238 SUPERFAMILY SSF52540 58 214 6.1E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1691 c28f1fa9fd3a46848b2bc58e38d134a6 238 Gene3D G3DSA:3.40.50.300 51 116 2.3E-13 T 14-10-2018 TMO_1691 c28f1fa9fd3a46848b2bc58e38d134a6 238 Gene3D G3DSA:3.40.50.300 117 220 7.3E-9 T 14-10-2018 TMO_1451 282c6d204806491d353918b39c3a43bc 716 ProSitePatterns PS00211 ABC transporters family signature. 620 634 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1451 282c6d204806491d353918b39c3a43bc 716 Gene3D G3DSA:3.40.50.300 475 716 1.7E-77 T 14-10-2018 TMO_1451 282c6d204806491d353918b39c3a43bc 716 Gene3D G3DSA:3.90.70.10 2 143 2.9E-37 T 14-10-2018 TMO_1451 282c6d204806491d353918b39c3a43bc 716 SUPERFAMILY SSF52540 478 713 3.03E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1451 282c6d204806491d353918b39c3a43bc 716 SUPERFAMILY SSF90123 162 466 3.01E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_1451 282c6d204806491d353918b39c3a43bc 716 Pfam PF00664 ABC transporter transmembrane region 165 432 1.4E-10 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_1451 282c6d204806491d353918b39c3a43bc 716 Pfam PF00005 ABC transporter 500 648 1.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1451 282c6d204806491d353918b39c3a43bc 716 Pfam PF03412 Peptidase C39 family 8 135 8.5E-33 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TMO_1451 282c6d204806491d353918b39c3a43bc 716 SMART SM00382 508 692 2.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1451 282c6d204806491d353918b39c3a43bc 716 Gene3D G3DSA:1.20.1560.10 155 461 2.5E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_0019 929c1fe7350279fe05503fc78ad2ceb7 351 Pfam PF13416 Bacterial extracellular solute-binding protein 71 315 5.1E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_0019 929c1fe7350279fe05503fc78ad2ceb7 351 Gene3D G3DSA:3.40.190.10 133 335 4.9E-113 T 14-10-2018 TMO_0019 929c1fe7350279fe05503fc78ad2ceb7 351 SUPERFAMILY SSF53850 30 349 1.04E-63 T 14-10-2018 TMO_0019 929c1fe7350279fe05503fc78ad2ceb7 351 Gene3D G3DSA:3.40.190.10 33 329 4.9E-113 T 14-10-2018 TMO_a0109 15b38ead337a7fd811bb9603e44a2ffd 209 Pfam PF04299 Putative FMN-binding domain 1 168 6.2E-44 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type TMO_a0109 15b38ead337a7fd811bb9603e44a2ffd 209 Gene3D G3DSA:2.30.110.10 1 208 4.6E-54 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_a0109 15b38ead337a7fd811bb9603e44a2ffd 209 PIRSF PIRSF010372 1 207 1.4E-47 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type TMO_a0109 15b38ead337a7fd811bb9603e44a2ffd 209 SUPERFAMILY SSF50475 11 204 4.3E-33 T 14-10-2018 TMO_b0215 fd4f99141ec1692335bbf4db65256852 201 SUPERFAMILY SSF48498 77 192 1.17E-28 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_b0215 fd4f99141ec1692335bbf4db65256852 201 Gene3D G3DSA:1.10.357.10 66 195 3.4E-33 T 14-10-2018 TMO_b0215 fd4f99141ec1692335bbf4db65256852 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0215 fd4f99141ec1692335bbf4db65256852 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0215 fd4f99141ec1692335bbf4db65256852 201 SUPERFAMILY SSF46689 1 74 7.7E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0215 fd4f99141ec1692335bbf4db65256852 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 7.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0215 fd4f99141ec1692335bbf4db65256852 201 Gene3D G3DSA:1.10.10.60 1 65 1.3E-25 T 14-10-2018 TMO_3461 9daf1ab67d86e0c9a33ca8f4d9c0335e 181 SMART SM00530 48 103 6.5E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_3461 9daf1ab67d86e0c9a33ca8f4d9c0335e 181 Pfam PF01381 Helix-turn-helix 49 101 1.5E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_3461 9daf1ab67d86e0c9a33ca8f4d9c0335e 181 SUPERFAMILY SSF47413 42 111 1.18E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_3461 9daf1ab67d86e0c9a33ca8f4d9c0335e 181 Gene3D G3DSA:1.10.260.40 40 123 4.0E-18 T 14-10-2018 TMO_2798 ea2e53fafd84a2e69a63a51f9c8ab341 741 Pfam PF13899 Thioredoxin-like 638 711 8.4E-10 T 14-10-2018 TMO_2798 ea2e53fafd84a2e69a63a51f9c8ab341 741 Gene3D G3DSA:3.40.30.10 625 734 2.0E-9 T 14-10-2018 TMO_2798 ea2e53fafd84a2e69a63a51f9c8ab341 741 Pfam PF11412 Disulphide bond corrector protein DsbC 66 182 4.7E-19 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain TMO_2798 ea2e53fafd84a2e69a63a51f9c8ab341 741 SUPERFAMILY SSF52833 632 733 1.99E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_1607 ab24af11c4a639e1db3a8a4ba0ba7a47 94 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 92 1.2E-6 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_1871 516584c5a88ec12a6ab567fa77612e0e 189 SUPERFAMILY SSF55653 59 146 1.26E-21 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TMO_1871 516584c5a88ec12a6ab567fa77612e0e 189 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1871 516584c5a88ec12a6ab567fa77612e0e 189 SUPERFAMILY SSF55658 1 54 1.05E-17 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal TMO_1871 516584c5a88ec12a6ab567fa77612e0e 189 Gene3D G3DSA:3.40.5.10 1 50 1.6E-22 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1871 516584c5a88ec12a6ab567fa77612e0e 189 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 7.7E-21 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1871 516584c5a88ec12a6ab567fa77612e0e 189 Gene3D G3DSA:3.10.430.100 60 147 3.4E-23 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TMO_1871 516584c5a88ec12a6ab567fa77612e0e 189 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 3.4E-22 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal TMO_1871 516584c5a88ec12a6ab567fa77612e0e 189 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 23.904 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_1871 516584c5a88ec12a6ab567fa77612e0e 189 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 3.1E-36 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_1596 aa158ec4e6054e81177f7fcf01e5cc95 242 Gene3D G3DSA:1.10.1520.10 9 160 6.5E-43 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 TMO_1596 aa158ec4e6054e81177f7fcf01e5cc95 242 SMART SM00358 168 235 1.4E-18 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain TMO_1596 aa158ec4e6054e81177f7fcf01e5cc95 242 SUPERFAMILY SSF54768 125 233 2.2E-24 T 14-10-2018 TMO_1596 aa158ec4e6054e81177f7fcf01e5cc95 242 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 15 233 3.6E-70 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 TMO_1596 aa158ec4e6054e81177f7fcf01e5cc95 242 Hamap MF_00104 Ribonuclease 3 [rnc]. 13 231 28.128 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 TMO_1596 aa158ec4e6054e81177f7fcf01e5cc95 242 SUPERFAMILY SSF69065 7 169 1.19E-46 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 TMO_1596 aa158ec4e6054e81177f7fcf01e5cc95 242 Pfam PF00035 Double-stranded RNA binding motif 168 231 1.6E-11 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain TMO_1596 aa158ec4e6054e81177f7fcf01e5cc95 242 Gene3D G3DSA:3.30.160.20 166 235 9.3E-19 T 14-10-2018 TMO_1596 aa158ec4e6054e81177f7fcf01e5cc95 242 ProSitePatterns PS00517 Ribonuclease III family signature. 52 60 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TMO_1596 aa158ec4e6054e81177f7fcf01e5cc95 242 Pfam PF14622 Ribonuclease-III-like 23 154 4.2E-31 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TMO_1596 aa158ec4e6054e81177f7fcf01e5cc95 242 SMART SM00535 25 163 2.3E-54 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TMO_3440 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 SMART SM00862 156 231 2.8E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_3440 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 Pfam PF00072 Response regulator receiver domain 7 121 8.8E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_3440 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 SUPERFAMILY SSF52172 3 141 4.84E-37 T 14-10-2018 IPR011006 CheY-like superfamily TMO_3440 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 Gene3D G3DSA:3.40.50.2300 1 133 8.4E-35 T 14-10-2018 TMO_3440 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 SMART SM00448 5 121 1.1E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_3440 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 SUPERFAMILY SSF46894 138 231 2.55E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_3440 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 Gene3D G3DSA:1.10.10.10 134 233 1.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3440 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 2.3E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 Pfam PF13185 GAF domain 1 138 3.4E-18 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 271 380 9.9E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 SUPERFAMILY SSF47384 146 230 6.08E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 SUPERFAMILY SSF55874 218 380 1.7E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 Gene3D G3DSA:3.30.450.40 1 149 1.5E-29 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 SMART SM00387 271 381 2.0E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 Gene3D G3DSA:1.10.287.130 150 232 5.8E-25 T 14-10-2018 TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 Gene3D G3DSA:3.30.565.10 233 381 1.7E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 323 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 379 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 360 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 Pfam PF00512 His Kinase A (phospho-acceptor) domain 161 229 2.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 SMART SM00388 160 229 1.1E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 SMART SM00065 1 148 3.7E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_0144 6a70abe7980a92d9072baa85f3ca01ec 381 SUPERFAMILY SSF55781 2 146 1.61E-24 T 14-10-2018 TMO_c0352 e89596643d4c42888d3027a7c771ff38 678 SUPERFAMILY SSF53067 11 400 1.2E-8 T 14-10-2018 TMO_c0352 e89596643d4c42888d3027a7c771ff38 678 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 11 186 7.7E-46 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_c0352 e89596643d4c42888d3027a7c771ff38 678 Pfam PF01968 Hydantoinase/oxoprolinase 205 484 1.5E-81 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_3008 3af239ddc20377e4a1877b2a1e868ec2 389 Gene3D G3DSA:3.40.50.261 240 388 2.7E-60 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3008 3af239ddc20377e4a1877b2a1e868ec2 389 SUPERFAMILY SSF56059 1 238 3.16E-88 T 14-10-2018 TMO_3008 3af239ddc20377e4a1877b2a1e868ec2 389 Gene3D G3DSA:3.30.470.20 1 234 4.1E-100 T 14-10-2018 TMO_3008 3af239ddc20377e4a1877b2a1e868ec2 389 SUPERFAMILY SSF52210 239 385 5.63E-57 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3008 3af239ddc20377e4a1877b2a1e868ec2 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3008 3af239ddc20377e4a1877b2a1e868ec2 389 PIRSF PIRSF001554 1 388 8.7E-160 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TMO_3008 3af239ddc20377e4a1877b2a1e868ec2 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 6.4E-170 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TMO_3008 3af239ddc20377e4a1877b2a1e868ec2 389 Gene3D G3DSA:3.30.1490.20 21 104 4.1E-100 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_3008 3af239ddc20377e4a1877b2a1e868ec2 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 45.432 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TMO_3008 3af239ddc20377e4a1877b2a1e868ec2 389 Pfam PF08442 ATP-grasp domain 2 203 1.9E-84 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TMO_3008 3af239ddc20377e4a1877b2a1e868ec2 389 Pfam PF00549 CoA-ligase 262 381 1.2E-28 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_c0628 957e65259288d68fb7eb8e056ec314e6 931 Pfam PF01555 DNA methylase 166 463 2.9E-31 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 TMO_c0628 957e65259288d68fb7eb8e056ec314e6 931 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 435 449 3.4E-15 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 TMO_c0628 957e65259288d68fb7eb8e056ec314e6 931 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 166 178 3.4E-15 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 TMO_c0628 957e65259288d68fb7eb8e056ec314e6 931 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 412 434 3.4E-15 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 TMO_c0628 957e65259288d68fb7eb8e056ec314e6 931 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 228 247 3.4E-15 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 TMO_c0628 957e65259288d68fb7eb8e056ec314e6 931 SUPERFAMILY SSF53335 138 478 2.15E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_3557 fe823ddce809ae3d3fe94ea16277f2fe 152 SUPERFAMILY SSF51283 9 151 4.32E-49 T 14-10-2018 IPR036157 dUTPase-like superfamily TMO_3557 fe823ddce809ae3d3fe94ea16277f2fe 152 Gene3D G3DSA:2.70.40.10 5 151 1.1E-52 T 14-10-2018 IPR036157 dUTPase-like superfamily TMO_3557 fe823ddce809ae3d3fe94ea16277f2fe 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 13 151 7.8E-51 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TMO_3557 fe823ddce809ae3d3fe94ea16277f2fe 152 Pfam PF00692 dUTPase 19 151 4.9E-31 T 14-10-2018 IPR029054 dUTPase-like TMO_3557 fe823ddce809ae3d3fe94ea16277f2fe 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 152 33.831 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TMO_0167 7a908e3b86883127054175f8061543c6 472 SMART SM00729 162 380 1.1E-56 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_0167 7a908e3b86883127054175f8061543c6 472 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 11 411 8.1E-128 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 TMO_0167 7a908e3b86883127054175f8061543c6 472 Pfam PF00919 Uncharacterized protein family UPF0004 10 96 2.0E-16 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TMO_0167 7a908e3b86883127054175f8061543c6 472 Gene3D G3DSA:3.80.30.20 159 386 3.9E-70 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TMO_0167 7a908e3b86883127054175f8061543c6 472 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 10 445 6.1E-99 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 TMO_0167 7a908e3b86883127054175f8061543c6 472 Pfam PF04055 Radical SAM superfamily 167 339 5.9E-24 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_0167 7a908e3b86883127054175f8061543c6 472 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 166 186 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TMO_0167 7a908e3b86883127054175f8061543c6 472 SUPERFAMILY SSF102114 138 381 1.12E-55 T 14-10-2018 TMO_0167 7a908e3b86883127054175f8061543c6 472 Gene3D G3DSA:3.40.50.12160 9 121 1.3E-16 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TMO_0749 32bf56e0c6d2ef51bf18e5654c3257f9 560 SUPERFAMILY SSF58104 241 553 4.58E-55 T 14-10-2018 TMO_0749 32bf56e0c6d2ef51bf18e5654c3257f9 560 SMART SM00283 300 547 3.0E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0749 32bf56e0c6d2ef51bf18e5654c3257f9 560 Gene3D G3DSA:1.20.1480.50 170 266 2.8E-14 T 14-10-2018 TMO_0749 32bf56e0c6d2ef51bf18e5654c3257f9 560 SMART SM00304 211 264 5.1E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0749 32bf56e0c6d2ef51bf18e5654c3257f9 560 SMART SM00304 481 534 53.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0749 32bf56e0c6d2ef51bf18e5654c3257f9 560 Pfam PF00672 HAMP domain 215 258 5.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0749 32bf56e0c6d2ef51bf18e5654c3257f9 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 366 525 7.9E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0749 32bf56e0c6d2ef51bf18e5654c3257f9 560 Gene3D G3DSA:1.10.287.950 267 559 1.9E-48 T 14-10-2018 TMO_0980 f34247a054ea30780720259ef7ee7034 99 Pfam PF01381 Helix-turn-helix 47 89 3.8E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_0980 f34247a054ea30780720259ef7ee7034 99 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 5 91 8.3E-39 T 14-10-2018 IPR014057 Uncharacterized protein HI1420 TMO_0980 f34247a054ea30780720259ef7ee7034 99 SUPERFAMILY SSF47413 29 90 1.35E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0293 f47cc6156cd4dc6c2296f49b7653f124 345 Pfam PF00005 ABC transporter 28 185 2.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0293 f47cc6156cd4dc6c2296f49b7653f124 345 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 331 2.1E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_0293 f47cc6156cd4dc6c2296f49b7653f124 345 Gene3D G3DSA:3.40.50.300 6 340 5.9E-90 T 14-10-2018 TMO_0293 f47cc6156cd4dc6c2296f49b7653f124 345 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0293 f47cc6156cd4dc6c2296f49b7653f124 345 SUPERFAMILY SSF52540 8 256 4.5E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0293 f47cc6156cd4dc6c2296f49b7653f124 345 SMART SM00382 37 235 2.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0293 f47cc6156cd4dc6c2296f49b7653f124 345 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 313 2.5E-12 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_0195 b5362c9ff80a29ecf941c1e16eb70e5b 192 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 7 177 29.803 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TMO_0195 b5362c9ff80a29ecf941c1e16eb70e5b 192 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 14 83 4.0E-31 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TMO_0195 b5362c9ff80a29ecf941c1e16eb70e5b 192 SUPERFAMILY SSF55200 90 174 2.09E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TMO_0195 b5362c9ff80a29ecf941c1e16eb70e5b 192 SUPERFAMILY SSF54364 12 85 2.22E-28 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TMO_0195 b5362c9ff80a29ecf941c1e16eb70e5b 192 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 14 175 3.3E-64 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TMO_0195 b5362c9ff80a29ecf941c1e16eb70e5b 192 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 90 174 2.5E-38 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 TMO_0195 b5362c9ff80a29ecf941c1e16eb70e5b 192 Gene3D G3DSA:3.10.20.80 9 82 6.7E-33 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TMO_0195 b5362c9ff80a29ecf941c1e16eb70e5b 192 ProSitePatterns PS00938 Initiation factor 3 signature. 65 78 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 TMO_0195 b5362c9ff80a29ecf941c1e16eb70e5b 192 Gene3D G3DSA:3.30.110.10 83 177 2.3E-38 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TMO_0897 aef9170ec089508ad5506091e0df8342 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 1.6E-99 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_0897 aef9170ec089508ad5506091e0df8342 249 Gene3D G3DSA:1.10.10.200 1 81 3.4E-33 T 14-10-2018 IPR017856 Integrase-like, N-terminal TMO_0897 aef9170ec089508ad5506091e0df8342 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.069 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_0897 aef9170ec089508ad5506091e0df8342 249 SUPERFAMILY SSF75625 3 246 1.57E-92 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_0897 aef9170ec089508ad5506091e0df8342 249 Gene3D G3DSA:3.30.70.980 84 236 1.7E-52 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_0897 aef9170ec089508ad5506091e0df8342 249 Gene3D G3DSA:3.30.70.980 133 205 1.7E-52 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_0897 aef9170ec089508ad5506091e0df8342 249 Pfam PF01709 Transcriptional regulator 5 237 3.3E-92 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2783 ce471980ce70d4a519e586528f9eaf56 680 SUPERFAMILY SSF81606 459 659 4.18E-8 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TMO_2783 ce471980ce70d4a519e586528f9eaf56 680 Gene3D G3DSA:3.60.40.10 411 661 3.4E-68 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TMO_2783 ce471980ce70d4a519e586528f9eaf56 680 SMART SM00331 443 661 7.5E-47 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TMO_2783 ce471980ce70d4a519e586528f9eaf56 680 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 471 660 3.9E-52 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TMO_2783 ce471980ce70d4a519e586528f9eaf56 680 Pfam PF00672 HAMP domain 346 394 4.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2783 ce471980ce70d4a519e586528f9eaf56 680 SUPERFAMILY SSF158472 346 403 6.41E-5 T 14-10-2018 TMO_2783 ce471980ce70d4a519e586528f9eaf56 680 Pfam PF08269 Cache domain 31 303 4.9E-28 T 14-10-2018 IPR004010 Double Cache domain 2 TMO_2783 ce471980ce70d4a519e586528f9eaf56 680 SMART SM00304 345 406 8.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2783 ce471980ce70d4a519e586528f9eaf56 680 Gene3D G3DSA:1.20.1480.50 310 410 1.4E-5 T 14-10-2018 TMO_2783 ce471980ce70d4a519e586528f9eaf56 680 SMART SM01049 58 151 6.4E-12 T 14-10-2018 IPR033480 Single Cache domain 2 TMO_2783 ce471980ce70d4a519e586528f9eaf56 680 Gene3D G3DSA:3.30.450.20 60 210 2.1E-22 T 14-10-2018 TMO_2220 670330c2dbf277d19877dc152aaadb62 1447 Pfam PF13872 P-loop containing NTP hydrolase pore-1 415 740 5.8E-121 T 14-10-2018 IPR039187 Strawberry notch, AAA domain TMO_2220 670330c2dbf277d19877dc152aaadb62 1447 Pfam PF13871 C-terminal domain on Strawberry notch homologue 911 1168 5.2E-87 T 14-10-2018 IPR026937 Strawberry notch, helicase C domain TMO_2220 670330c2dbf277d19877dc152aaadb62 1447 Gene3D G3DSA:3.40.50.150 119 280 3.0E-7 T 14-10-2018 TMO_2220 670330c2dbf277d19877dc152aaadb62 1447 SUPERFAMILY SSF53335 120 309 7.19E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_2220 670330c2dbf277d19877dc152aaadb62 1447 Gene3D G3DSA:3.40.50.300 481 668 2.3E-10 T 14-10-2018 TMO_2220 670330c2dbf277d19877dc152aaadb62 1447 SUPERFAMILY SSF52540 447 696 2.22E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3441 320c6e211af960f93ed7447857d2c028 302 Gene3D G3DSA:1.10.10.10 1 85 1.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3441 320c6e211af960f93ed7447857d2c028 302 Pfam PF03466 LysR substrate binding domain 92 296 6.8E-20 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_3441 320c6e211af960f93ed7447857d2c028 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.0E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3441 320c6e211af960f93ed7447857d2c028 302 Gene3D G3DSA:3.40.190.10 168 267 1.2E-56 T 14-10-2018 TMO_3441 320c6e211af960f93ed7447857d2c028 302 SUPERFAMILY SSF53850 87 296 1.7E-39 T 14-10-2018 TMO_3441 320c6e211af960f93ed7447857d2c028 302 SUPERFAMILY SSF46785 1 81 2.2E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3441 320c6e211af960f93ed7447857d2c028 302 Gene3D G3DSA:3.40.190.10 87 292 1.2E-56 T 14-10-2018 TMO_3441 320c6e211af960f93ed7447857d2c028 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3441 320c6e211af960f93ed7447857d2c028 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3441 320c6e211af960f93ed7447857d2c028 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3098 e6e02efe382c059db10e6dab192648c4 104 Pfam PF02325 YGGT family 15 91 9.3E-23 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 TMO_c0371 568713f7825734b371fd4e9a688c8547 330 Gene3D G3DSA:1.10.10.60 232 325 3.5E-21 T 14-10-2018 TMO_c0371 568713f7825734b371fd4e9a688c8547 330 Pfam PF01965 DJ-1/PfpI family 71 196 4.6E-10 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_c0371 568713f7825734b371fd4e9a688c8547 330 SUPERFAMILY SSF52317 22 215 1.73E-28 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_c0371 568713f7825734b371fd4e9a688c8547 330 SUPERFAMILY SSF46689 232 283 3.14E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0371 568713f7825734b371fd4e9a688c8547 330 SMART SM00342 249 329 2.0E-7 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0371 568713f7825734b371fd4e9a688c8547 330 Pfam PF12833 Helix-turn-helix domain 255 323 2.1E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0371 568713f7825734b371fd4e9a688c8547 330 Gene3D G3DSA:3.40.50.880 17 222 7.2E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_0992 90277484dafe595abf26a3eaac19ff94 309 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 217 289 2.5E-8 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TMO_0992 90277484dafe595abf26a3eaac19ff94 309 Pfam PF01571 Aminomethyltransferase folate-binding domain 29 123 4.4E-11 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain TMO_0992 90277484dafe595abf26a3eaac19ff94 309 Gene3D G3DSA:3.30.1360.120 4 305 6.6E-58 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TMO_0992 90277484dafe595abf26a3eaac19ff94 309 PIRSF PIRSF006487 153 300 0.0033 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TMO_0992 90277484dafe595abf26a3eaac19ff94 309 PIRSF PIRSF006487 13 128 2.1E-8 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TMO_0992 90277484dafe595abf26a3eaac19ff94 309 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 177 242 5.9E-23 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site TMO_0992 90277484dafe595abf26a3eaac19ff94 309 SUPERFAMILY SSF103025 19 232 9.73E-53 T 14-10-2018 TMO_1158 33c7f504806dd96ecefc0d474a3e0b69 202 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_1158 33c7f504806dd96ecefc0d474a3e0b69 202 Gene3D G3DSA:1.20.120.1760 5 201 1.7E-19 T 14-10-2018 TMO_1158 33c7f504806dd96ecefc0d474a3e0b69 202 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 89 1.2E-7 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_d0053 b1f0c53fe456411958b98507b33b1ec1 840 Gene3D G3DSA:2.170.130.10 150 284 2.6E-35 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_d0053 b1f0c53fe456411958b98507b33b1ec1 840 SMART SM00965 72 123 2.2E-12 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_d0053 b1f0c53fe456411958b98507b33b1ec1 840 Gene3D G3DSA:2.40.170.20 285 840 1.9E-135 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_d0053 b1f0c53fe456411958b98507b33b1ec1 840 Pfam PF07715 TonB-dependent Receptor Plug Domain 172 273 3.1E-19 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_d0053 b1f0c53fe456411958b98507b33b1ec1 840 Pfam PF00593 TonB dependent receptor 349 839 2.9E-55 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_d0053 b1f0c53fe456411958b98507b33b1ec1 840 SUPERFAMILY SSF56935 130 840 2.83E-129 T 14-10-2018 TMO_d0053 b1f0c53fe456411958b98507b33b1ec1 840 Gene3D G3DSA:3.55.50.30 42 144 5.9E-29 T 14-10-2018 TMO_d0053 b1f0c53fe456411958b98507b33b1ec1 840 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 173 839 9.4E-120 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_1890 222f3e59d0741467ecccac316e65c444 350 SMART SM00829 30 347 3.8E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_1890 222f3e59d0741467ecccac316e65c444 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 47 106 1.0E-4 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_1890 222f3e59d0741467ecccac316e65c444 350 SUPERFAMILY SSF50129 24 170 7.76E-25 T 14-10-2018 IPR011032 GroES-like superfamily TMO_1890 222f3e59d0741467ecccac316e65c444 350 Gene3D G3DSA:3.90.180.10 30 346 4.5E-77 T 14-10-2018 TMO_1890 222f3e59d0741467ecccac316e65c444 350 Gene3D G3DSA:3.40.50.720 144 293 4.5E-77 T 14-10-2018 TMO_1890 222f3e59d0741467ecccac316e65c444 350 SUPERFAMILY SSF51735 134 281 6.76E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1890 222f3e59d0741467ecccac316e65c444 350 Pfam PF00107 Zinc-binding dehydrogenase 172 274 6.3E-17 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_3090 f3020e59d685952126ce4859f6cca1e5 228 Gene3D G3DSA:1.10.3720.10 1 225 3.1E-53 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3090 f3020e59d685952126ce4859f6cca1e5 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 116 1.1E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_3090 f3020e59d685952126ce4859f6cca1e5 228 SUPERFAMILY SSF161098 10 207 6.67E-42 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3090 f3020e59d685952126ce4859f6cca1e5 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 222 2.4E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3037 ef4d1819e3bb54676e8dcddd328df25d 153 PRINTS PR00502 NUDIX hydrolase family signature 38 52 9.7E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TMO_3037 ef4d1819e3bb54676e8dcddd328df25d 153 PRINTS PR00502 NUDIX hydrolase family signature 52 67 9.7E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TMO_3037 ef4d1819e3bb54676e8dcddd328df25d 153 Pfam PF00293 NUDIX domain 5 136 4.1E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_3037 ef4d1819e3bb54676e8dcddd328df25d 153 Gene3D G3DSA:3.90.79.10 2 139 4.8E-25 T 14-10-2018 TMO_3037 ef4d1819e3bb54676e8dcddd328df25d 153 SUPERFAMILY SSF55811 3 146 2.44E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TMO_3037 ef4d1819e3bb54676e8dcddd328df25d 153 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_3120 8444652d7a0c95fabb8565baae156077 527 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 10 527 8.1E-209 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_3120 8444652d7a0c95fabb8565baae156077 527 SUPERFAMILY SSF53927 215 527 7.42E-128 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TMO_3120 8444652d7a0c95fabb8565baae156077 527 Pfam PF01808 AICARFT/IMPCHase bienzyme 139 451 3.2E-119 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_3120 8444652d7a0c95fabb8565baae156077 527 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 527 44.402 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_3120 8444652d7a0c95fabb8565baae156077 527 SMART SM00851 20 134 4.6E-58 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain TMO_3120 8444652d7a0c95fabb8565baae156077 527 Pfam PF02142 MGS-like domain 20 133 1.6E-25 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain TMO_3120 8444652d7a0c95fabb8565baae156077 527 PIRSF PIRSF000414 4 527 5.6E-215 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_3120 8444652d7a0c95fabb8565baae156077 527 Gene3D G3DSA:3.40.50.1380 3 203 6.8E-85 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TMO_3120 8444652d7a0c95fabb8565baae156077 527 SUPERFAMILY SSF52335 8 199 2.88E-69 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TMO_3120 8444652d7a0c95fabb8565baae156077 527 Gene3D G3DSA:3.40.140.20 210 361 3.3E-58 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_3120 8444652d7a0c95fabb8565baae156077 527 SMART SM00798 139 452 3.3E-202 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_3120 8444652d7a0c95fabb8565baae156077 527 Gene3D G3DSA:3.40.140.20 384 527 1.1E-56 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TMO_a0158 530ab90255e2b6ea156fc62963ddbc53 491 SMART SM00878 336 442 1.3E-50 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_a0158 530ab90255e2b6ea156fc62963ddbc53 491 SUPERFAMILY SSF51246 330 445 3.92E-39 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TMO_a0158 530ab90255e2b6ea156fc62963ddbc53 491 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 1.2E-36 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_a0158 530ab90255e2b6ea156fc62963ddbc53 491 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_a0158 530ab90255e2b6ea156fc62963ddbc53 491 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.7E-40 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_a0158 530ab90255e2b6ea156fc62963ddbc53 491 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_a0158 530ab90255e2b6ea156fc62963ddbc53 491 SUPERFAMILY SSF52440 1 113 2.45E-44 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_a0158 530ab90255e2b6ea156fc62963ddbc53 491 Gene3D G3DSA:3.30.470.130 1 448 9.3E-185 T 14-10-2018 TMO_a0158 530ab90255e2b6ea156fc62963ddbc53 491 SUPERFAMILY SSF56059 83 349 6.89E-66 T 14-10-2018 TMO_a0158 530ab90255e2b6ea156fc62963ddbc53 491 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.3E-64 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_2291 1ecd2cbe90bcdc13f80df5195ea5cfea 719 Pfam PF00593 TonB dependent receptor 252 718 1.8E-47 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_2291 1ecd2cbe90bcdc13f80df5195ea5cfea 719 Gene3D G3DSA:2.170.130.10 32 171 1.1E-24 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_2291 1ecd2cbe90bcdc13f80df5195ea5cfea 719 SUPERFAMILY SSF56935 31 719 3.36E-93 T 14-10-2018 TMO_2291 1ecd2cbe90bcdc13f80df5195ea5cfea 719 Gene3D G3DSA:2.40.170.20 172 719 8.8E-68 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_2291 1ecd2cbe90bcdc13f80df5195ea5cfea 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 161 3.4E-19 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_2291 1ecd2cbe90bcdc13f80df5195ea5cfea 719 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 702 719 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site TMO_c0309 0788361c33a90391cf470ed4dc7bcb1b 467 Pfam PF03109 ABC1 family 121 234 1.1E-26 T 14-10-2018 IPR004147 UbiB domain TMO_c0309 0788361c33a90391cf470ed4dc7bcb1b 467 SUPERFAMILY SSF56112 109 367 5.7E-18 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_0485 a8421e01764359d88c27be4a8b140263 511 Pfam PF02310 B12 binding domain 64 131 2.0E-9 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TMO_0485 a8421e01764359d88c27be4a8b140263 511 Pfam PF04055 Radical SAM superfamily 191 351 4.9E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_0485 a8421e01764359d88c27be4a8b140263 511 SUPERFAMILY SSF102114 183 374 3.27E-23 T 14-10-2018 TMO_0485 a8421e01764359d88c27be4a8b140263 511 Gene3D G3DSA:3.40.50.280 29 140 2.2E-8 T 14-10-2018 TMO_0485 a8421e01764359d88c27be4a8b140263 511 SMART SM00729 186 389 2.7E-8 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_0485 a8421e01764359d88c27be4a8b140263 511 Gene3D G3DSA:3.80.30.20 185 370 1.3E-13 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TMO_b0434 6b7b33e4c560645ed6649aa3e999bce1 267 Gene3D G3DSA:3.90.226.10 3 209 1.1E-77 T 14-10-2018 TMO_b0434 6b7b33e4c560645ed6649aa3e999bce1 267 SUPERFAMILY SSF52096 10 236 1.17E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_b0434 6b7b33e4c560645ed6649aa3e999bce1 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 215 1.3E-43 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_b0434 6b7b33e4c560645ed6649aa3e999bce1 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 108 128 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_0990 096b1744528a7606ee621dacc473b8f8 174 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 171 7.8E-60 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 TMO_0990 096b1744528a7606ee621dacc473b8f8 174 SUPERFAMILY SSF53271 3 161 5.64E-49 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like TMO_0990 096b1744528a7606ee621dacc473b8f8 174 Gene3D G3DSA:3.40.50.2020 1 174 4.7E-61 T 14-10-2018 TMO_0990 096b1744528a7606ee621dacc473b8f8 174 Pfam PF00156 Phosphoribosyl transferase domain 37 148 5.7E-17 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TMO_0990 096b1744528a7606ee621dacc473b8f8 174 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 172 34.163 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 TMO_c0504 3b21db6896e68b84407b723a0adf616c 462 Gene3D G3DSA:3.30.1330.90 11 161 1.3E-51 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 TMO_c0504 3b21db6896e68b84407b723a0adf616c 462 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 4 459 1.4E-179 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 TMO_c0504 3b21db6896e68b84407b723a0adf616c 462 Pfam PF03313 Serine dehydratase alpha chain 192 456 9.1E-93 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit TMO_c0504 3b21db6896e68b84407b723a0adf616c 462 SUPERFAMILY SSF143548 17 157 1.15E-42 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 TMO_c0504 3b21db6896e68b84407b723a0adf616c 462 Pfam PF03315 Serine dehydratase beta chain 4 155 3.7E-53 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 TMO_c0718 f90651243ccc094051db287db3023d28 366 SUPERFAMILY SSF54593 15 349 6.5E-86 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_c0718 f90651243ccc094051db287db3023d28 366 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 23 362 1.4E-128 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 TMO_c0718 f90651243ccc094051db287db3023d28 366 PIRSF PIRSF009283 11 363 1.6E-124 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 TMO_c0718 f90651243ccc094051db287db3023d28 366 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 170 281 7.2E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_c0718 f90651243ccc094051db287db3023d28 366 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 15 153 3.1E-67 T 14-10-2018 TMO_c0718 f90651243ccc094051db287db3023d28 366 Gene3D G3DSA:3.10.180.10 14 164 4.0E-56 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_c0718 f90651243ccc094051db287db3023d28 366 Gene3D G3DSA:3.10.180.10 165 363 1.3E-67 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_a0426 48ce7fb907924695ba71214b15477254 451 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 95 344 2.7E-22 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT TMO_a0426 48ce7fb907924695ba71214b15477254 451 PIRSF PIRSF500217 1 451 3.5E-107 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 TMO_a0426 48ce7fb907924695ba71214b15477254 451 PIRSF PIRSF016636 1 451 9.3E-109 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB TMO_1136 0aab13708197f61333d8aecc82b9d7bd 415 SMART SM01329 19 405 4.0E-134 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TMO_1136 0aab13708197f61333d8aecc82b9d7bd 415 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 15 405 5.3E-71 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TMO_1136 0aab13708197f61333d8aecc82b9d7bd 415 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 12 414 1.4E-215 T 14-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 TMO_1136 0aab13708197f61333d8aecc82b9d7bd 415 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 280 299 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 TMO_1136 0aab13708197f61333d8aecc82b9d7bd 415 Gene3D G3DSA:3.40.718.10 8 415 3.0E-219 T 14-10-2018 TMO_1136 0aab13708197f61333d8aecc82b9d7bd 415 PIRSF PIRSF000108 3 415 6.0E-228 T 14-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 TMO_1136 0aab13708197f61333d8aecc82b9d7bd 415 SUPERFAMILY SSF53659 11 413 2.34E-156 T 14-10-2018 TMO_b0057 d93a04a4e6ad34641d959801303190a3 220 SUPERFAMILY SSF161098 15 202 3.53E-41 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0057 d93a04a4e6ad34641d959801303190a3 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 6.6E-25 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_b0057 d93a04a4e6ad34641d959801303190a3 220 Gene3D G3DSA:1.10.3720.10 3 218 4.8E-52 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0057 d93a04a4e6ad34641d959801303190a3 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 1.6E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1824 270604be2e6d335287cd0b779d197197 158 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 83.88 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 TMO_1824 270604be2e6d335287cd0b779d197197 158 Pfam PF03477 ATP cone domain 50 136 6.2E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TMO_1824 270604be2e6d335287cd0b779d197197 158 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 144 2.1E-51 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 TMO_b0439 35c976117825287fe2a51f46be3d98e9 301 SUPERFAMILY SSF56529 85 299 1.27E-75 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_b0439 35c976117825287fe2a51f46be3d98e9 301 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 89 299 2.4E-72 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 TMO_b0439 35c976117825287fe2a51f46be3d98e9 301 Gene3D G3DSA:3.90.850.10 84 301 1.4E-86 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_c0118 21cb8f90c550f01c7e235ac00c18ac6d 273 Pfam PF00990 Diguanylate cyclase, GGDEF domain 101 258 7.1E-43 T 14-10-2018 IPR000160 GGDEF domain TMO_c0118 21cb8f90c550f01c7e235ac00c18ac6d 273 SUPERFAMILY SSF55073 106 263 8.24E-49 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_c0118 21cb8f90c550f01c7e235ac00c18ac6d 273 SMART SM00267 90 262 6.7E-57 T 14-10-2018 IPR000160 GGDEF domain TMO_c0118 21cb8f90c550f01c7e235ac00c18ac6d 273 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 97 262 5.9E-44 T 14-10-2018 IPR000160 GGDEF domain TMO_c0118 21cb8f90c550f01c7e235ac00c18ac6d 273 Gene3D G3DSA:3.30.70.270 94 268 2.1E-56 T 14-10-2018 TMO_c0914 567516b19e2c164e0d7b6ec4283212e8 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 260 2.6E-64 T 14-10-2018 TMO_c0914 567516b19e2c164e0d7b6ec4283212e8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 9.7E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0914 567516b19e2c164e0d7b6ec4283212e8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 9.7E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0914 567516b19e2c164e0d7b6ec4283212e8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 9.7E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0914 567516b19e2c164e0d7b6ec4283212e8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 9.7E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0914 567516b19e2c164e0d7b6ec4283212e8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 9.7E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0914 567516b19e2c164e0d7b6ec4283212e8 264 Gene3D G3DSA:3.40.50.720 1 263 2.7E-83 T 14-10-2018 TMO_c0914 567516b19e2c164e0d7b6ec4283212e8 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 7.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0914 567516b19e2c164e0d7b6ec4283212e8 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 7.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0914 567516b19e2c164e0d7b6ec4283212e8 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 7.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0914 567516b19e2c164e0d7b6ec4283212e8 264 SUPERFAMILY SSF51735 1 261 7.43E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2959 53a2a5a4ff54c10e8e48c2d20db7e7e8 265 Pfam PF02311 AraC-like ligand binding domain 10 124 6.8E-20 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_2959 53a2a5a4ff54c10e8e48c2d20db7e7e8 265 SUPERFAMILY SSF51215 18 92 7.19E-17 T 14-10-2018 IPR037923 Transcription regulator HTH-like TMO_2959 53a2a5a4ff54c10e8e48c2d20db7e7e8 265 SUPERFAMILY SSF46689 215 259 1.3E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2959 53a2a5a4ff54c10e8e48c2d20db7e7e8 265 SMART SM00342 177 259 3.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2959 53a2a5a4ff54c10e8e48c2d20db7e7e8 265 Pfam PF12833 Helix-turn-helix domain 185 259 2.5E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2959 53a2a5a4ff54c10e8e48c2d20db7e7e8 265 SUPERFAMILY SSF46689 162 211 4.44E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2959 53a2a5a4ff54c10e8e48c2d20db7e7e8 265 Gene3D G3DSA:1.10.10.60 161 264 2.3E-21 T 14-10-2018 TMO_1932 b9e97e6b67b6e199704462a82ea9e310 427 Pfam PF04285 Protein of unknown function (DUF444) 7 413 1.0E-130 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 TMO_1932 b9e97e6b67b6e199704462a82ea9e310 427 SUPERFAMILY SSF53300 242 366 1.92E-5 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TMO_1932 b9e97e6b67b6e199704462a82ea9e310 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 3 415 31.988 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 TMO_1932 b9e97e6b67b6e199704462a82ea9e310 427 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 15 410 1.7E-141 T 14-10-2018 IPR014230 Sporulation protein YhbH TMO_b0169 cdec126cefe663671027eff551d5a9dd 100 SUPERFAMILY SSF47413 45 97 8.04E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_b0169 cdec126cefe663671027eff551d5a9dd 100 Gene3D G3DSA:1.10.260.40 6 97 5.8E-16 T 14-10-2018 TMO_b0169 cdec126cefe663671027eff551d5a9dd 100 Pfam PF01381 Helix-turn-helix 45 88 1.2E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_a0579 1f81c25634c1f88643c9370f46feaac9 101 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 34 99 1.6E-13 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D TMO_2089 cafaeb580cc0ba599d403bcb2371d01c 318 SUPERFAMILY SSF51735 108 287 3.81E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2089 cafaeb580cc0ba599d403bcb2371d01c 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 287 9.4E-58 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_2089 cafaeb580cc0ba599d403bcb2371d01c 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 31 318 1.8E-13 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TMO_2089 cafaeb580cc0ba599d403bcb2371d01c 318 Gene3D G3DSA:3.40.50.720 4 311 4.7E-118 T 14-10-2018 TMO_2089 cafaeb580cc0ba599d403bcb2371d01c 318 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TMO_2089 cafaeb580cc0ba599d403bcb2371d01c 318 SUPERFAMILY SSF52283 1 127 3.19E-21 T 14-10-2018 TMO_2089 cafaeb580cc0ba599d403bcb2371d01c 318 Gene3D G3DSA:3.40.50.720 107 303 4.7E-118 T 14-10-2018 TMO_2089 cafaeb580cc0ba599d403bcb2371d01c 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 20 359 34.06 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 SUPERFAMILY SSF48179 216 368 1.87E-49 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 SUPERFAMILY SSF51735 18 217 1.15E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 PIRSF PIRSF000114 17 369 1.5E-90 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 225 246 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 217 357 1.1E-45 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 Gene3D G3DSA:1.10.1040.10 226 373 1.0E-46 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 235 259 3.4E-38 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 275 292 3.4E-38 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 73 100 3.4E-38 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 3.4E-38 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 24 41 3.4E-38 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 Gene3D G3DSA:3.40.50.720 12 178 2.6E-51 T 14-10-2018 TMO_c0635 0e6c3d875cdd6e3b485df51293ea3cd7 393 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 22 173 1.1E-43 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TMO_1226 f5fc4c0221d9c805ba2f406d17b254e0 395 SUPERFAMILY SSF52738 205 392 7.98E-59 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal TMO_1226 f5fc4c0221d9c805ba2f406d17b254e0 395 PIRSF PIRSF000876 1 394 5.3E-109 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TMO_1226 f5fc4c0221d9c805ba2f406d17b254e0 395 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 392 31.349 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TMO_1226 f5fc4c0221d9c805ba2f406d17b254e0 395 SUPERFAMILY SSF52172 1 110 1.85E-24 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1226 f5fc4c0221d9c805ba2f406d17b254e0 395 Gene3D G3DSA:3.40.50.180 200 394 1.8E-60 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal TMO_1226 f5fc4c0221d9c805ba2f406d17b254e0 395 SMART SM00448 1 123 9.7E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1226 f5fc4c0221d9c805ba2f406d17b254e0 395 Gene3D G3DSA:3.40.50.2300 1 131 2.1E-26 T 14-10-2018 TMO_1226 f5fc4c0221d9c805ba2f406d17b254e0 395 Pfam PF00072 Response regulator receiver domain 1 109 1.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1226 f5fc4c0221d9c805ba2f406d17b254e0 395 Pfam PF01339 CheB methylesterase 208 386 2.4E-51 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TMO_0407 5e5fb81b5f573416d2972c40193c0070 281 Pfam PF00691 OmpA family 178 273 4.0E-15 T 14-10-2018 IPR006665 OmpA-like domain TMO_0407 5e5fb81b5f573416d2972c40193c0070 281 Gene3D G3DSA:3.30.1330.60 157 281 2.0E-21 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_0407 5e5fb81b5f573416d2972c40193c0070 281 PRINTS PR01021 OMPA domain signature 179 201 2.1E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_0407 5e5fb81b5f573416d2972c40193c0070 281 PRINTS PR01021 OMPA domain signature 209 224 2.1E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_0407 5e5fb81b5f573416d2972c40193c0070 281 PRINTS PR01021 OMPA domain signature 224 240 2.1E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_0407 5e5fb81b5f573416d2972c40193c0070 281 SUPERFAMILY SSF103088 171 279 2.09E-23 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_2084 7e101bcca402e35b47fb7870bb43d4a7 403 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 TMO_2084 7e101bcca402e35b47fb7870bb43d4a7 403 SUPERFAMILY SSF53901 279 401 1.29E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2084 7e101bcca402e35b47fb7870bb43d4a7 403 Gene3D G3DSA:3.40.47.10 9 284 1.9E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2084 7e101bcca402e35b47fb7870bb43d4a7 403 Pfam PF00108 Thiolase, N-terminal domain 8 270 6.8E-63 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_2084 7e101bcca402e35b47fb7870bb43d4a7 403 Pfam PF02803 Thiolase, C-terminal domain 278 402 5.3E-47 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_2084 7e101bcca402e35b47fb7870bb43d4a7 403 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 TMO_2084 7e101bcca402e35b47fb7870bb43d4a7 403 SUPERFAMILY SSF53901 6 278 2.23E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2084 7e101bcca402e35b47fb7870bb43d4a7 403 Gene3D G3DSA:3.40.47.10 143 400 1.9E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2084 7e101bcca402e35b47fb7870bb43d4a7 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 TMO_2084 7e101bcca402e35b47fb7870bb43d4a7 403 PIRSF PIRSF000429 1 403 6.7E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_2084 7e101bcca402e35b47fb7870bb43d4a7 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 401 2.3E-128 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_b0556 c3c356c19a5462d11d9e23d536f693b7 158 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 129 5.7E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_b0556 c3c356c19a5462d11d9e23d536f693b7 158 Gene3D G3DSA:3.30.720.110 77 145 8.7E-19 T 14-10-2018 TMO_b0556 c3c356c19a5462d11d9e23d536f693b7 158 SUPERFAMILY SSF54593 17 132 2.34E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0556 c3c356c19a5462d11d9e23d536f693b7 158 Gene3D G3DSA:3.30.720.120 8 71 4.4E-14 T 14-10-2018 TMO_c0192 5807c9986bf8dbe4bb98636c10cd6518 178 Pfam PF00805 Pentapeptide repeats (8 copies) 61 92 3.5E-8 T 14-10-2018 IPR001646 Pentapeptide repeat TMO_c0192 5807c9986bf8dbe4bb98636c10cd6518 178 Pfam PF00805 Pentapeptide repeats (8 copies) 105 144 6.7E-13 T 14-10-2018 IPR001646 Pentapeptide repeat TMO_c0192 5807c9986bf8dbe4bb98636c10cd6518 178 Gene3D G3DSA:2.160.20.100 42 171 1.0E-34 T 14-10-2018 TMO_c0192 5807c9986bf8dbe4bb98636c10cd6518 178 SUPERFAMILY SSF141571 44 164 2.22E-34 T 14-10-2018 TMO_c0197 f7294b8327c8276cf81ce891e909f3da 346 Pfam PF01544 CorA-like Mg2+ transporter protein 52 339 1.0E-51 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 TMO_c0197 f7294b8327c8276cf81ce891e909f3da 346 SUPERFAMILY SSF143865 6 278 4.84E-45 T 14-10-2018 TMO_c0197 f7294b8327c8276cf81ce891e909f3da 346 Gene3D G3DSA:3.30.460.20 1 148 4.0E-42 T 14-10-2018 TMO_c0197 f7294b8327c8276cf81ce891e909f3da 346 Gene3D G3DSA:1.20.58.340 279 346 4.0E-12 T 14-10-2018 TMO_c0197 f7294b8327c8276cf81ce891e909f3da 346 Gene3D G3DSA:1.20.58.340 150 278 5.5E-36 T 14-10-2018 TMO_c0197 f7294b8327c8276cf81ce891e909f3da 346 SUPERFAMILY SSF144083 282 343 3.01E-12 T 14-10-2018 TMO_a0100 69d9c821024a40ad0259fcc2100621a0 119 Pfam PF14112 Immunity protein 22 8 113 6.6E-16 T 14-10-2018 IPR025560 Immunity protein 22 TMO_c0792 4bdc69c458096a50794cc64d32741ac3 320 SUPERFAMILY SSF52540 14 281 6.76E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0792 4bdc69c458096a50794cc64d32741ac3 320 Pfam PF03308 ArgK protein 24 281 3.1E-72 T 14-10-2018 TMO_c0792 4bdc69c458096a50794cc64d32741ac3 320 SMART SM00382 52 221 2.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0792 4bdc69c458096a50794cc64d32741ac3 320 Gene3D G3DSA:3.40.50.300 47 258 4.9E-71 T 14-10-2018 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 Pfam PF00682 HMGL-like 54 322 1.3E-97 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 248 261 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 Gene3D G3DSA:3.30.160.270 446 548 3.1E-10 T 14-10-2018 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 53 544 4.0E-216 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 61 77 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 Pfam PF08502 LeuA allosteric (dimerisation) domain 419 547 9.8E-32 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 SUPERFAMILY SSF51569 50 340 1.57E-101 T 14-10-2018 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 51 557 41.88 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 SUPERFAMILY SSF110921 448 545 2.62E-20 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 SMART SM00917 418 548 4.7E-32 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 Gene3D G3DSA:1.10.238.260 329 444 7.1E-39 T 14-10-2018 TMO_0760 fbbb85a4416bf615fa342413b213f2e5 568 Gene3D G3DSA:3.20.20.70 49 326 7.2E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_b0372 f30fec62a200401dc61589c98f801d07 388 Gene3D G3DSA:2.40.50.940 240 300 6.2E-17 T 14-10-2018 TMO_b0372 f30fec62a200401dc61589c98f801d07 388 Gene3D G3DSA:2.40.50.140 301 355 6.2E-17 T 14-10-2018 TMO_b0372 f30fec62a200401dc61589c98f801d07 388 SMART SM00382 28 231 6.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0372 f30fec62a200401dc61589c98f801d07 388 Gene3D G3DSA:3.40.50.300 3 239 6.7E-61 T 14-10-2018 TMO_b0372 f30fec62a200401dc61589c98f801d07 388 SUPERFAMILY SSF52540 4 260 7.86E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0372 f30fec62a200401dc61589c98f801d07 388 SUPERFAMILY SSF50331 254 372 1.28E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_b0372 f30fec62a200401dc61589c98f801d07 388 Pfam PF08402 TOBE domain 294 361 8.2E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_b0372 f30fec62a200401dc61589c98f801d07 388 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0372 f30fec62a200401dc61589c98f801d07 388 Pfam PF00005 ABC transporter 19 179 1.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2066 365935c87f2b0e19630ba09a7da26ec8 753 TIGRFAM TIGR03607 TIGR03607: patatin-related protein 9 426 3.2E-82 T 14-10-2018 IPR019894 Patatin-related protein TMO_2066 365935c87f2b0e19630ba09a7da26ec8 753 Pfam PF11856 Protein of unknown function (DUF3376) 391 705 2.4E-15 T 14-10-2018 IPR024282 Domain of unknown function DUF3376 TMO_2066 365935c87f2b0e19630ba09a7da26ec8 753 SUPERFAMILY SSF52151 10 339 7.85E-14 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TMO_2066 365935c87f2b0e19630ba09a7da26ec8 753 Pfam PF01734 Patatin-like phospholipase 15 337 4.9E-13 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TMO_0875 ed3bc19f341724036a113d229a743d50 424 SUPERFAMILY SSF57997 75 267 3.27E-6 T 14-10-2018 TMO_0875 ed3bc19f341724036a113d229a743d50 424 SUPERFAMILY SSF103088 295 420 7.32E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_0875 ed3bc19f341724036a113d229a743d50 424 Gene3D G3DSA:3.30.1330.60 250 424 2.9E-44 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_0875 ed3bc19f341724036a113d229a743d50 424 Pfam PF00691 OmpA family 309 415 8.5E-18 T 14-10-2018 IPR006665 OmpA-like domain TMO_3463 a57b0c5a13cc28bcfbd45cce0d015530 313 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 120 3.4E-43 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TMO_3463 a57b0c5a13cc28bcfbd45cce0d015530 313 Hamap MF_00162 Glutathione synthetase [gshB]. 1 313 161.574 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TMO_3463 a57b0c5a13cc28bcfbd45cce0d015530 313 Gene3D G3DSA:3.30.1490.20 137 201 4.3E-112 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_3463 a57b0c5a13cc28bcfbd45cce0d015530 313 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 311 5.2E-129 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TMO_3463 a57b0c5a13cc28bcfbd45cce0d015530 313 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 295 3.1E-73 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TMO_3463 a57b0c5a13cc28bcfbd45cce0d015530 313 SUPERFAMILY SSF52440 3 122 1.18E-42 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_3463 a57b0c5a13cc28bcfbd45cce0d015530 313 Gene3D G3DSA:3.40.50.20 9 114 4.3E-112 T 14-10-2018 TMO_3463 a57b0c5a13cc28bcfbd45cce0d015530 313 Gene3D G3DSA:3.30.470.20 115 294 4.3E-112 T 14-10-2018 TMO_3463 a57b0c5a13cc28bcfbd45cce0d015530 313 SUPERFAMILY SSF56059 124 310 1.19E-56 T 14-10-2018 TMO_a0333 4e235092e656bfa0aec925b406e93b03 342 SUPERFAMILY SSF46626 244 341 1.55E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_a0333 4e235092e656bfa0aec925b406e93b03 342 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 172 220 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0333 4e235092e656bfa0aec925b406e93b03 342 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 153 225 9.6E-15 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0333 4e235092e656bfa0aec925b406e93b03 342 Pfam PF00034 Cytochrome c 252 341 7.1E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0333 4e235092e656bfa0aec925b406e93b03 342 SUPERFAMILY SSF49503 123 286 4.66E-41 T 14-10-2018 IPR008972 Cupredoxin TMO_a0333 4e235092e656bfa0aec925b406e93b03 342 Gene3D G3DSA:2.60.40.2600 123 342 2.6E-71 T 14-10-2018 TMO_a0156 4f036c6766b5e2bc97fde6d7b4efaefe 535 Gene3D G3DSA:3.90.226.10 1 268 2.3E-73 T 14-10-2018 TMO_a0156 4f036c6766b5e2bc97fde6d7b4efaefe 535 Pfam PF01039 Carboxyl transferase domain 50 525 1.7E-122 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 TMO_a0156 4f036c6766b5e2bc97fde6d7b4efaefe 535 SUPERFAMILY SSF52096 273 534 6.81E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0156 4f036c6766b5e2bc97fde6d7b4efaefe 535 Gene3D G3DSA:3.90.226.10 274 535 1.7E-83 T 14-10-2018 TMO_a0156 4f036c6766b5e2bc97fde6d7b4efaefe 535 SUPERFAMILY SSF52096 25 267 8.3E-56 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_1835 3fb65d403d9ad0452981a451987623ef 255 Gene3D G3DSA:3.10.180.10 1 119 1.4E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_1835 3fb65d403d9ad0452981a451987623ef 255 Gene3D G3DSA:3.10.180.10 129 244 3.6E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_1835 3fb65d403d9ad0452981a451987623ef 255 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 133 236 5.1E-10 T 14-10-2018 TMO_1835 3fb65d403d9ad0452981a451987623ef 255 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 92 2.3E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_1835 3fb65d403d9ad0452981a451987623ef 255 SUPERFAMILY SSF54593 1 160 4.26E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_1835 3fb65d403d9ad0452981a451987623ef 255 SUPERFAMILY SSF54593 129 242 2.26E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_2688 630160b5375607d70847e81997f6a85b 268 Pfam PF12833 Helix-turn-helix domain 173 249 2.0E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2688 630160b5375607d70847e81997f6a85b 268 Gene3D G3DSA:1.10.10.60 154 254 1.3E-12 T 14-10-2018 TMO_2688 630160b5375607d70847e81997f6a85b 268 SMART SM00342 166 250 0.0055 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2796 bc9f9e267391cd326a331a416d5be2a5 224 Gene3D G3DSA:3.40.50.2020 10 224 1.2E-80 T 14-10-2018 TMO_2796 bc9f9e267391cd326a331a416d5be2a5 224 Pfam PF14681 Uracil phosphoribosyltransferase 20 223 3.3E-71 T 14-10-2018 TMO_2796 bc9f9e267391cd326a331a416d5be2a5 224 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 17 224 43.102 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 TMO_2796 bc9f9e267391cd326a331a416d5be2a5 224 SUPERFAMILY SSF53271 18 222 6.78E-63 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like TMO_2796 bc9f9e267391cd326a331a416d5be2a5 224 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 18 223 5.5E-78 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 TMO_2991 a2c50d913da6f872715e60461297d6e2 265 Gene3D G3DSA:3.30.450.40 83 261 2.4E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_2991 a2c50d913da6f872715e60461297d6e2 265 Pfam PF04340 Protein of unknown function, DUF484 46 260 1.9E-23 T 14-10-2018 IPR007435 Protein of unknown function DUF484 TMO_2209 107dc72958c5a7c926c9881de17e3b43 277 Pfam PF13649 Methyltransferase domain 50 145 8.7E-20 T 14-10-2018 TMO_2209 107dc72958c5a7c926c9881de17e3b43 277 Gene3D G3DSA:3.40.50.150 4 261 4.7E-42 T 14-10-2018 TMO_2209 107dc72958c5a7c926c9881de17e3b43 277 SUPERFAMILY SSF53335 14 254 9.29E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_3433 97873e1367dbaed89aff768edd9a7fb5 215 SMART SM00867 41 213 2.3E-54 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like TMO_3433 97873e1367dbaed89aff768edd9a7fb5 215 SUPERFAMILY SSF101874 41 215 4.84E-46 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily TMO_3433 97873e1367dbaed89aff768edd9a7fb5 215 Pfam PF04264 YceI-like domain 42 212 5.8E-37 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like TMO_3433 97873e1367dbaed89aff768edd9a7fb5 215 Gene3D G3DSA:2.40.128.110 41 215 8.1E-45 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily TMO_0463 dc2af6e59e4a8cc1f097f265af1480ad 385 Gene3D G3DSA:3.20.20.70 4 384 2.2E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_0463 dc2af6e59e4a8cc1f097f265af1480ad 385 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 276 282 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 TMO_0463 dc2af6e59e4a8cc1f097f265af1480ad 385 Pfam PF01070 FMN-dependent dehydrogenase 16 377 2.2E-127 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 TMO_0463 dc2af6e59e4a8cc1f097f265af1480ad 385 PIRSF PIRSF000138 1 383 4.5E-133 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 TMO_0463 dc2af6e59e4a8cc1f097f265af1480ad 385 SUPERFAMILY SSF51395 5 379 1.25E-94 T 14-10-2018 TMO_2974 c7527b4f66b0e479656d4591204ee44f 534 Pfam PF01676 Metalloenzyme superfamily 19 511 8.3E-77 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 TMO_2974 c7527b4f66b0e479656d4591204ee44f 534 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 19 522 4.6E-199 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_2974 c7527b4f66b0e479656d4591204ee44f 534 SUPERFAMILY SSF64158 91 310 1.83E-74 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_2974 c7527b4f66b0e479656d4591204ee44f 534 Gene3D G3DSA:3.40.1450.10 91 321 1.2E-197 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_2974 c7527b4f66b0e479656d4591204ee44f 534 PIRSF PIRSF001492 12 525 5.5E-196 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_2974 c7527b4f66b0e479656d4591204ee44f 534 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 96 306 7.4E-69 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_2974 c7527b4f66b0e479656d4591204ee44f 534 SUPERFAMILY SSF53649 18 522 7.59E-74 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TMO_2974 c7527b4f66b0e479656d4591204ee44f 534 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 18 523 47.248 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_2974 c7527b4f66b0e479656d4591204ee44f 534 Gene3D G3DSA:3.40.720.10 19 522 1.2E-197 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TMO_1945 8b7279eed32e73d4bd81878021373812 600 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 68 597 2.0E-243 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 TMO_1945 8b7279eed32e73d4bd81878021373812 600 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 111 283 1.9E-79 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 TMO_1945 8b7279eed32e73d4bd81878021373812 600 SUPERFAMILY SSF53474 233 537 1.37E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1945 8b7279eed32e73d4bd81878021373812 600 Gene3D G3DSA:3.40.50.1820 244 534 1.1E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0502 cce2c8bc07438384231730de484ab164 306 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_a0502 cce2c8bc07438384231730de484ab164 306 SUPERFAMILY SSF51735 7 259 9.59E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0502 cce2c8bc07438384231730de484ab164 306 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 249 1.6E-41 T 14-10-2018 TMO_a0502 cce2c8bc07438384231730de484ab164 306 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 1.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0502 cce2c8bc07438384231730de484ab164 306 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 1.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0502 cce2c8bc07438384231730de484ab164 306 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 1.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0502 cce2c8bc07438384231730de484ab164 306 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 206 4.4E-5 T 14-10-2018 TMO_a0502 cce2c8bc07438384231730de484ab164 306 Gene3D G3DSA:3.40.50.720 6 296 4.0E-70 T 14-10-2018 TMO_a0502 cce2c8bc07438384231730de484ab164 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.8E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0502 cce2c8bc07438384231730de484ab164 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 3.8E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0502 cce2c8bc07438384231730de484ab164 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 3.8E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0502 cce2c8bc07438384231730de484ab164 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 3.8E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0502 cce2c8bc07438384231730de484ab164 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 3.8E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0502 cce2c8bc07438384231730de484ab164 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.8E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0890 b34d13c590303dc9dd70f83fcbc17407 301 SMART SM00346 33 124 1.8E-20 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_c0890 b34d13c590303dc9dd70f83fcbc17407 301 Gene3D G3DSA:3.30.450.40 106 283 2.9E-38 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_c0890 b34d13c590303dc9dd70f83fcbc17407 301 Pfam PF09339 IclR helix-turn-helix domain 35 87 1.3E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_c0890 b34d13c590303dc9dd70f83fcbc17407 301 SUPERFAMILY SSF55781 99 281 1.37E-37 T 14-10-2018 TMO_c0890 b34d13c590303dc9dd70f83fcbc17407 301 SUPERFAMILY SSF46785 34 108 4.77E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0890 b34d13c590303dc9dd70f83fcbc17407 301 Pfam PF01614 Bacterial transcriptional regulator 155 277 1.3E-15 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_c0890 b34d13c590303dc9dd70f83fcbc17407 301 Gene3D G3DSA:1.10.10.10 31 105 3.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0508 95089bf0ed0d7e45201e6707cd8cfca0 200 Pfam PF03073 TspO/MBR family 28 159 6.6E-44 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 TMO_0508 95089bf0ed0d7e45201e6707cd8cfca0 200 Gene3D G3DSA:1.20.1260.100 19 160 1.4E-48 T 14-10-2018 IPR038330 TspO/MBR-related superfamily TMO_1186 d9c3a3aaf7d6044167c92e47d6b5b8a8 281 SUPERFAMILY SSF56300 1 246 1.98E-35 T 14-10-2018 TMO_1186 d9c3a3aaf7d6044167c92e47d6b5b8a8 281 Gene3D G3DSA:3.60.21.10 1 254 7.5E-31 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like TMO_1186 d9c3a3aaf7d6044167c92e47d6b5b8a8 281 Pfam PF00149 Calcineurin-like phosphoesterase 1 201 2.2E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TMO_1855 85a67776cf47d0c879616c07d2fa9b4f 296 Pfam PF08340 Domain of unknown function (DUF1732) 212 296 4.4E-33 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 TMO_1855 85a67776cf47d0c879616c07d2fa9b4f 296 Pfam PF03755 YicC-like family, N-terminal region 4 159 2.4E-33 T 14-10-2018 IPR013527 YicC-like, N-terminal TMO_1855 85a67776cf47d0c879616c07d2fa9b4f 296 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 3 296 1.1E-58 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 TMO_2142 0b659b6a00c7bb5ca2dc0d2c0bdf7445 408 Pfam PF07690 Major Facilitator Superfamily 6 314 1.3E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_2142 0b659b6a00c7bb5ca2dc0d2c0bdf7445 408 SUPERFAMILY SSF103473 2 389 4.45E-49 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2142 0b659b6a00c7bb5ca2dc0d2c0bdf7445 408 Gene3D G3DSA:1.20.1250.20 1 386 1.2E-42 T 14-10-2018 TMO_2010 88e4e5127da4f88745d5a31858333295 241 Pfam PF00005 ABC transporter 21 163 6.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2010 88e4e5127da4f88745d5a31858333295 241 SUPERFAMILY SSF52540 5 228 2.17E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2010 88e4e5127da4f88745d5a31858333295 241 Gene3D G3DSA:3.40.50.300 1 236 1.2E-59 T 14-10-2018 TMO_2010 88e4e5127da4f88745d5a31858333295 241 SMART SM00382 30 212 2.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2010 88e4e5127da4f88745d5a31858333295 241 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 Gene3D G3DSA:3.40.50.720 2 257 3.2E-85 T 14-10-2018 TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 194 2.7E-4 T 14-10-2018 TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 256 2.0E-67 T 14-10-2018 TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 SUPERFAMILY SSF51735 7 257 1.63E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 8.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 8.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 8.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 8.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 8.4E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0641 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0503 ffdb805f3d03902d2517ea5687436289 346 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 37 217 5.0E-19 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal TMO_b0503 ffdb805f3d03902d2517ea5687436289 346 SUPERFAMILY SSF46689 295 343 1.48E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0503 ffdb805f3d03902d2517ea5687436289 346 Gene3D G3DSA:1.10.10.60 250 346 7.7E-22 T 14-10-2018 TMO_b0503 ffdb805f3d03902d2517ea5687436289 346 Pfam PF12833 Helix-turn-helix domain 267 343 1.8E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0503 ffdb805f3d03902d2517ea5687436289 346 SMART SM00342 260 342 2.7E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0885 7ea5f616acd8b68af867ce83b1272430 166 Gene3D G3DSA:3.30.450.40 13 164 5.7E-64 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_c0885 7ea5f616acd8b68af867ce83b1272430 166 Pfam PF13185 GAF domain 69 157 5.2E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_c0885 7ea5f616acd8b68af867ce83b1272430 166 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 102 119 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site TMO_c0885 7ea5f616acd8b68af867ce83b1272430 166 SUPERFAMILY SSF55781 18 158 3.27E-41 T 14-10-2018 TMO_b0539 22bf0da9f3dcb159b732160460f9f752 350 Gene3D G3DSA:1.10.10.60 216 324 1.6E-26 T 14-10-2018 TMO_b0539 22bf0da9f3dcb159b732160460f9f752 350 SUPERFAMILY SSF46689 272 320 4.12E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0539 22bf0da9f3dcb159b732160460f9f752 350 Pfam PF01965 DJ-1/PfpI family 10 181 3.0E-14 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_b0539 22bf0da9f3dcb159b732160460f9f752 350 Pfam PF12833 Helix-turn-helix domain 242 320 1.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0539 22bf0da9f3dcb159b732160460f9f752 350 SMART SM00342 236 319 3.3E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_b0539 22bf0da9f3dcb159b732160460f9f752 350 Gene3D G3DSA:3.40.50.880 4 207 3.9E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_b0539 22bf0da9f3dcb159b732160460f9f752 350 SUPERFAMILY SSF52317 9 198 8.1E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1793 a9972b3fcf166b83ec8050a4f67de122 438 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 19 436 3.8E-176 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 TMO_1793 a9972b3fcf166b83ec8050a4f67de122 438 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 212 226 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_1793 a9972b3fcf166b83ec8050a4f67de122 438 Gene3D G3DSA:3.90.1150.10 304 438 5.4E-50 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_1793 a9972b3fcf166b83ec8050a4f67de122 438 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 435 1.7E-135 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_1793 a9972b3fcf166b83ec8050a4f67de122 438 PIRSF PIRSF001434 9 438 5.5E-123 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_1793 a9972b3fcf166b83ec8050a4f67de122 438 Gene3D G3DSA:3.40.640.10 18 300 5.5E-99 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_1793 a9972b3fcf166b83ec8050a4f67de122 438 SUPERFAMILY SSF53383 18 435 3.32E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_a0443 375a96738fd04e24ad62150128cf311b 411 SUPERFAMILY SSF89796 11 394 1.1E-123 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_a0443 375a96738fd04e24ad62150128cf311b 411 Gene3D G3DSA:3.30.1540.10 241 331 2.8E-128 T 14-10-2018 TMO_a0443 375a96738fd04e24ad62150128cf311b 411 Pfam PF02515 CoA-transferase family III 13 386 8.9E-130 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_a0443 375a96738fd04e24ad62150128cf311b 411 Gene3D G3DSA:3.40.50.10540 13 351 2.8E-128 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_b0364 fa12ff626729f2e71fb0316209f7e4a5 182 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 159 2.3E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_0106 dc8554390e23bee8f7f76b05c3f34174 252 Gene3D G3DSA:3.40.50.300 1 248 9.5E-60 T 14-10-2018 TMO_0106 dc8554390e23bee8f7f76b05c3f34174 252 SMART SM00382 26 238 2.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0106 dc8554390e23bee8f7f76b05c3f34174 252 Pfam PF00005 ABC transporter 17 172 4.9E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0106 dc8554390e23bee8f7f76b05c3f34174 252 SUPERFAMILY SSF52540 2 230 1.7E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0106 dc8554390e23bee8f7f76b05c3f34174 252 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.7E-108 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 TMO_2904 83ca0742158de84299daf9f2c843c457 327 Gene3D G3DSA:3.40.190.10 132 297 9.8E-61 T 14-10-2018 TMO_2904 83ca0742158de84299daf9f2c843c457 327 Pfam PF13343 Bacterial extracellular solute-binding protein 79 303 1.4E-25 T 14-10-2018 TMO_2904 83ca0742158de84299daf9f2c843c457 327 PIRSF PIRSF002825 1 321 2.6E-53 T 14-10-2018 IPR026045 Ferric binding protein TMO_2904 83ca0742158de84299daf9f2c843c457 327 SUPERFAMILY SSF53850 24 308 3.0E-58 T 14-10-2018 TMO_2904 83ca0742158de84299daf9f2c843c457 327 Gene3D G3DSA:3.40.190.10 31 296 9.8E-61 T 14-10-2018 TMO_2530 6030e0197f6d0828d7cc196d1fc5a3b4 274 Gene3D G3DSA:3.90.226.10 3 214 2.0E-58 T 14-10-2018 TMO_2530 6030e0197f6d0828d7cc196d1fc5a3b4 274 Gene3D G3DSA:1.10.12.10 220 274 1.6E-14 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_2530 6030e0197f6d0828d7cc196d1fc5a3b4 274 SUPERFAMILY SSF52096 11 274 1.14E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_2530 6030e0197f6d0828d7cc196d1fc5a3b4 274 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 273 5.8E-46 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_c0154 6542db249b9f3bd24bb120e28fa2670d 181 SUPERFAMILY SSF50022 40 180 3.8E-42 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_c0154 6542db249b9f3bd24bb120e28fa2670d 181 PRINTS PR00162 Rieske 2Fe-2S subunit signature 141 153 1.3E-17 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 TMO_c0154 6542db249b9f3bd24bb120e28fa2670d 181 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 1.3E-17 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 TMO_c0154 6542db249b9f3bd24bb120e28fa2670d 181 PRINTS PR00162 Rieske 2Fe-2S subunit signature 153 165 1.3E-17 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 TMO_c0154 6542db249b9f3bd24bb120e28fa2670d 181 Pfam PF00355 Rieske [2Fe-2S] domain 64 167 1.2E-12 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_c0154 6542db249b9f3bd24bb120e28fa2670d 181 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 11 50 1.3E-16 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 TMO_c0154 6542db249b9f3bd24bb120e28fa2670d 181 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 42 0.001 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_c0154 6542db249b9f3bd24bb120e28fa2670d 181 Gene3D G3DSA:2.102.10.10 51 180 8.0E-56 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_c0154 6542db249b9f3bd24bb120e28fa2670d 181 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 19 181 2.1E-68 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 TMO_c0154 6542db249b9f3bd24bb120e28fa2670d 181 Gene3D G3DSA:1.20.5.510 11 50 6.1E-15 T 14-10-2018 TMO_0845 eeccb60a21e89b77e29b6f4b7e14c958 545 Gene3D G3DSA:3.30.300.310 445 544 3.0E-36 T 14-10-2018 TMO_0845 eeccb60a21e89b77e29b6f4b7e14c958 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 458 532 6.5E-23 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0845 eeccb60a21e89b77e29b6f4b7e14c958 545 Gene3D G3DSA:3.40.50.12780 12 444 9.7E-107 T 14-10-2018 TMO_0845 eeccb60a21e89b77e29b6f4b7e14c958 545 Pfam PF00501 AMP-binding enzyme 30 449 1.7E-94 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0845 eeccb60a21e89b77e29b6f4b7e14c958 545 SUPERFAMILY SSF56801 18 544 1.44E-145 T 14-10-2018 TMO_0845 eeccb60a21e89b77e29b6f4b7e14c958 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0938 c8f6d70e046ae11e6696ca64ab99f158 535 SUPERFAMILY SSF53335 92 488 2.22E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0938 c8f6d70e046ae11e6696ca64ab99f158 535 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 422 486 1.3E-4 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 TMO_0938 c8f6d70e046ae11e6696ca64ab99f158 535 Gene3D G3DSA:2.40.50.140 27 103 1.4E-20 T 14-10-2018 TMO_0938 c8f6d70e046ae11e6696ca64ab99f158 535 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 425 455 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site TMO_0938 c8f6d70e046ae11e6696ca64ab99f158 535 SUPERFAMILY SSF50249 28 84 2.06E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_c0278 893f43674567ec1bf3330d459278a8d8 69 ProSitePatterns PS00202 Rubredoxin signature. 48 58 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 TMO_c0278 893f43674567ec1bf3330d459278a8d8 69 PRINTS PR00163 Rubredoxin signature 18 34 7.5E-8 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 TMO_c0278 893f43674567ec1bf3330d459278a8d8 69 PRINTS PR00163 Rubredoxin signature 48 64 7.5E-8 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 TMO_c0278 893f43674567ec1bf3330d459278a8d8 69 Pfam PF00301 Rubredoxin 19 64 5.1E-20 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 TMO_c0278 893f43674567ec1bf3330d459278a8d8 69 PIRSF PIRSF000071 9 69 1.5E-22 T 14-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 TMO_c0278 893f43674567ec1bf3330d459278a8d8 69 SUPERFAMILY SSF57802 17 68 3.03E-20 T 14-10-2018 TMO_c0278 893f43674567ec1bf3330d459278a8d8 69 Gene3D G3DSA:2.20.28.10 10 69 8.2E-24 T 14-10-2018 TMO_1024 53c5731f21245332005f2c1d6feec1d8 390 SUPERFAMILY SSF56601 30 385 9.47E-75 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_1024 53c5731f21245332005f2c1d6feec1d8 390 Pfam PF00144 Beta-lactamase 92 372 1.2E-41 T 14-10-2018 IPR001466 Beta-lactamase-related TMO_1024 53c5731f21245332005f2c1d6feec1d8 390 Gene3D G3DSA:1.20.58.710 139 237 1.2E-78 T 14-10-2018 TMO_1024 53c5731f21245332005f2c1d6feec1d8 390 Gene3D G3DSA:3.40.710.10 88 365 1.2E-78 T 14-10-2018 TMO_1413 67ac46dca982e4cd8045144b2b7e4f2a 312 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 80 5.3E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_1413 67ac46dca982e4cd8045144b2b7e4f2a 312 SUPERFAMILY SSF52833 4 86 2.38E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_1413 67ac46dca982e4cd8045144b2b7e4f2a 312 Pfam PF13410 Glutathione S-transferase, C-terminal domain 152 213 2.3E-12 T 14-10-2018 TMO_1413 67ac46dca982e4cd8045144b2b7e4f2a 312 Gene3D G3DSA:3.40.30.110 203 312 4.0E-26 T 14-10-2018 TMO_1413 67ac46dca982e4cd8045144b2b7e4f2a 312 Gene3D G3DSA:3.40.30.110 1 92 9.5E-39 T 14-10-2018 TMO_1413 67ac46dca982e4cd8045144b2b7e4f2a 312 SUPERFAMILY SSF47616 112 219 1.03E-13 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_0326 812480610529154b9454e473044462fc 412 Pfam PF13458 Periplasmic binding protein 37 355 4.8E-58 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_0326 812480610529154b9454e473044462fc 412 Gene3D G3DSA:3.40.50.2300 156 286 2.1E-68 T 14-10-2018 TMO_0326 812480610529154b9454e473044462fc 412 Gene3D G3DSA:3.40.50.2300 38 352 2.1E-68 T 14-10-2018 TMO_0326 812480610529154b9454e473044462fc 412 SUPERFAMILY SSF53822 36 408 6.54E-77 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_3333 6e22729d86a7d63c9deb4f37a2dee96c 135 Hamap MF_00791 Protein ApaG [apaG]. 7 132 33.164 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG TMO_3333 6e22729d86a7d63c9deb4f37a2dee96c 135 Pfam PF04379 ApaG domain 25 109 2.5E-36 T 14-10-2018 IPR007474 ApaG domain TMO_3333 6e22729d86a7d63c9deb4f37a2dee96c 135 Gene3D G3DSA:2.60.40.1470 2 135 8.8E-52 T 14-10-2018 IPR036767 ApaG domain superfamily TMO_3333 6e22729d86a7d63c9deb4f37a2dee96c 135 SUPERFAMILY SSF110069 10 133 2.62E-50 T 14-10-2018 IPR036767 ApaG domain superfamily TMO_1755 13c15cfc5a62f2d176aa858b7739ac0f 561 Pfam PF04748 Divergent polysaccharide deacetylase 313 524 1.2E-80 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase TMO_1755 13c15cfc5a62f2d176aa858b7739ac0f 561 Gene3D G3DSA:3.20.20.370 293 531 2.9E-93 T 14-10-2018 TMO_1755 13c15cfc5a62f2d176aa858b7739ac0f 561 SUPERFAMILY SSF88713 309 524 7.94E-72 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_1885 8f0e21a599125a31874b25dcad7a06a2 458 SUPERFAMILY SSF50998 73 449 3.66E-68 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TMO_1885 8f0e21a599125a31874b25dcad7a06a2 458 Pfam PF13360 PQQ-like domain 397 457 1.0E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TMO_1885 8f0e21a599125a31874b25dcad7a06a2 458 Pfam PF13360 PQQ-like domain 107 159 9.9E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TMO_1885 8f0e21a599125a31874b25dcad7a06a2 458 Pfam PF13360 PQQ-like domain 169 377 1.6E-42 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TMO_1885 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 398 429 0.073 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_1885 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 212 244 25.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_1885 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 125 157 0.026 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_1885 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 173 204 13.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_1885 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 310 341 3.8E-4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_1885 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 348 379 790.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_1885 8f0e21a599125a31874b25dcad7a06a2 458 Gene3D G3DSA:2.130.10.10 92 458 1.5E-81 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TMO_c0336 208d20dce393346905a918740ff0815e 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 5.2E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_c0336 208d20dce393346905a918740ff0815e 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 5.2E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_c0336 208d20dce393346905a918740ff0815e 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 5.2E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_c0336 208d20dce393346905a918740ff0815e 112 SUPERFAMILY SSF46785 4 93 1.04E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0336 208d20dce393346905a918740ff0815e 112 Gene3D G3DSA:1.10.10.10 1 95 9.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0336 208d20dce393346905a918740ff0815e 112 Pfam PF12840 Helix-turn-helix domain 9 69 1.5E-13 T 14-10-2018 TMO_c0336 208d20dce393346905a918740ff0815e 112 SMART SM00418 8 88 2.4E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_2656 7cff4d3155b7628c4bdaa7f30e5243ec 314 Pfam PF00892 EamA-like transporter family 23 155 1.8E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_2656 7cff4d3155b7628c4bdaa7f30e5243ec 314 Pfam PF00892 EamA-like transporter family 170 306 5.6E-24 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_2656 7cff4d3155b7628c4bdaa7f30e5243ec 314 SUPERFAMILY SSF103481 56 158 1.96E-12 T 14-10-2018 TMO_2656 7cff4d3155b7628c4bdaa7f30e5243ec 314 SUPERFAMILY SSF103481 209 310 6.67E-13 T 14-10-2018 TMO_3005 cc4d13a2b0d37b66515b6eab56bb99ed 416 SUPERFAMILY SSF51230 7 103 1.44E-29 T 14-10-2018 IPR011053 Single hybrid motif TMO_3005 cc4d13a2b0d37b66515b6eab56bb99ed 416 Gene3D G3DSA:3.30.559.10 185 416 4.9E-95 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_3005 cc4d13a2b0d37b66515b6eab56bb99ed 416 SUPERFAMILY SSF52777 174 413 5.78E-88 T 14-10-2018 TMO_3005 cc4d13a2b0d37b66515b6eab56bb99ed 416 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 34 63 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TMO_3005 cc4d13a2b0d37b66515b6eab56bb99ed 416 Pfam PF00364 Biotin-requiring enzyme 11 83 7.3E-23 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_3005 cc4d13a2b0d37b66515b6eab56bb99ed 416 SUPERFAMILY SSF47005 119 160 2.35E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 TMO_3005 cc4d13a2b0d37b66515b6eab56bb99ed 416 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 10 415 1.0E-176 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 TMO_3005 cc4d13a2b0d37b66515b6eab56bb99ed 416 Pfam PF02817 e3 binding domain 124 157 9.1E-11 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 TMO_3005 cc4d13a2b0d37b66515b6eab56bb99ed 416 Gene3D G3DSA:2.40.50.100 7 108 8.0E-29 T 14-10-2018 TMO_3005 cc4d13a2b0d37b66515b6eab56bb99ed 416 Gene3D G3DSA:4.10.320.10 116 170 1.1E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 TMO_3005 cc4d13a2b0d37b66515b6eab56bb99ed 416 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 186 413 1.6E-81 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 TMO_c0582 726716ebfea4678a7c21564ad5de46c9 318 SUPERFAMILY SSF53850 110 279 1.35E-8 T 14-10-2018 TMO_c0582 726716ebfea4678a7c21564ad5de46c9 318 Gene3D G3DSA:3.40.190.10 121 244 2.0E-76 T 14-10-2018 TMO_c0582 726716ebfea4678a7c21564ad5de46c9 318 Gene3D G3DSA:3.40.190.150 25 309 2.0E-76 T 14-10-2018 TMO_c0582 726716ebfea4678a7c21564ad5de46c9 318 PIRSF PIRSF017082 1 318 4.5E-72 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 TMO_c0582 726716ebfea4678a7c21564ad5de46c9 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 309 2.3E-46 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 TMO_b0334 7d086415508c8c56d681d711330ed385 682 SUPERFAMILY SSF81345 11 342 2.35E-58 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_b0334 7d086415508c8c56d681d711330ed385 682 Gene3D G3DSA:1.10.3470.10 367 682 2.2E-72 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_b0334 7d086415508c8c56d681d711330ed385 682 Pfam PF01032 FecCD transport family 375 680 2.0E-70 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_b0334 7d086415508c8c56d681d711330ed385 682 Pfam PF01032 FecCD transport family 26 340 1.2E-65 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_b0334 7d086415508c8c56d681d711330ed385 682 Gene3D G3DSA:1.10.3470.10 10 345 6.9E-72 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_b0334 7d086415508c8c56d681d711330ed385 682 SUPERFAMILY SSF81345 374 681 5.62E-64 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_3505 5dbda32df635a7533020aecf0d064872 340 Gene3D G3DSA:3.40.190.10 25 311 4.9E-55 T 14-10-2018 TMO_3505 5dbda32df635a7533020aecf0d064872 340 Pfam PF12849 PBP superfamily domain 18 303 3.9E-46 T 14-10-2018 IPR024370 PBP domain TMO_3505 5dbda32df635a7533020aecf0d064872 340 Gene3D G3DSA:3.40.190.10 110 277 4.9E-55 T 14-10-2018 TMO_3505 5dbda32df635a7533020aecf0d064872 340 SUPERFAMILY SSF53850 24 333 7.29E-71 T 14-10-2018 TMO_0231 d002c1302be4921f7fe6a651b6e22eb5 333 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 37 95 2.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0231 d002c1302be4921f7fe6a651b6e22eb5 333 SUPERFAMILY SSF53850 123 332 1.01E-33 T 14-10-2018 TMO_0231 d002c1302be4921f7fe6a651b6e22eb5 333 Gene3D G3DSA:1.10.10.10 35 121 4.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0231 d002c1302be4921f7fe6a651b6e22eb5 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0231 d002c1302be4921f7fe6a651b6e22eb5 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 73 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0231 d002c1302be4921f7fe6a651b6e22eb5 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 73 84 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0231 d002c1302be4921f7fe6a651b6e22eb5 333 Gene3D G3DSA:3.40.190.10 132 324 2.2E-52 T 14-10-2018 TMO_0231 d002c1302be4921f7fe6a651b6e22eb5 333 SUPERFAMILY SSF46785 34 142 5.12E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0231 d002c1302be4921f7fe6a651b6e22eb5 333 Pfam PF03466 LysR substrate binding domain 122 327 1.4E-29 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0231 d002c1302be4921f7fe6a651b6e22eb5 333 Gene3D G3DSA:3.40.190.10 192 297 2.2E-52 T 14-10-2018 TMO_2085 e1d204b8aa217a770bb8306aaf117805 521 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 200 297 1.6E-28 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_2085 e1d204b8aa217a770bb8306aaf117805 521 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 430 513 6.8E-16 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_2085 e1d204b8aa217a770bb8306aaf117805 521 Gene3D G3DSA:1.10.1040.50 203 510 1.5E-89 T 14-10-2018 TMO_2085 e1d204b8aa217a770bb8306aaf117805 521 SUPERFAMILY SSF48179 430 513 1.36E-15 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_2085 e1d204b8aa217a770bb8306aaf117805 521 Gene3D G3DSA:3.30.750.190 303 427 1.5E-89 T 14-10-2018 TMO_2085 e1d204b8aa217a770bb8306aaf117805 521 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 20 197 3.7E-54 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_2085 e1d204b8aa217a770bb8306aaf117805 521 SUPERFAMILY SSF48179 199 306 6.46E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_2085 e1d204b8aa217a770bb8306aaf117805 521 SUPERFAMILY SSF51735 19 199 3.6E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2085 e1d204b8aa217a770bb8306aaf117805 521 Gene3D G3DSA:3.40.50.720 1 198 1.4E-58 T 14-10-2018 TMO_3224 7815de771cf9f60f9699eb7d5a0d5d4a 322 PIRSF PIRSF034934 2 322 1.5E-56 T 14-10-2018 IPR017034 Abortive infection system protein AbiD/AbiF TMO_3224 7815de771cf9f60f9699eb7d5a0d5d4a 322 Pfam PF07751 Abi-like protein 34 236 3.1E-47 T 14-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like TMO_0445 9fbf81d28c8e5ce265366748f8e1cb90 180 Pfam PF13432 Tetratricopeptide repeat 64 122 7.5E-6 T 14-10-2018 TMO_0445 9fbf81d28c8e5ce265366748f8e1cb90 180 Gene3D G3DSA:1.25.40.10 59 177 9.6E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_0445 9fbf81d28c8e5ce265366748f8e1cb90 180 SUPERFAMILY SSF48452 52 169 3.52E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_0445 9fbf81d28c8e5ce265366748f8e1cb90 180 SMART SM00028 128 161 0.28 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_0445 9fbf81d28c8e5ce265366748f8e1cb90 180 SMART SM00028 94 127 4.3E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_a0482 902fe6ceeeebeb17db863e538e7ea232 282 SUPERFAMILY SSF52788 117 255 3.01E-37 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily TMO_a0482 902fe6ceeeebeb17db863e538e7ea232 282 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 119 242 4.6E-14 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TMO_a0482 902fe6ceeeebeb17db863e538e7ea232 282 Pfam PF12840 Helix-turn-helix domain 10 69 1.3E-11 T 14-10-2018 TMO_a0482 902fe6ceeeebeb17db863e538e7ea232 282 Gene3D G3DSA:3.40.50.2300 116 255 5.8E-38 T 14-10-2018 TMO_a0482 902fe6ceeeebeb17db863e538e7ea232 282 SUPERFAMILY SSF46785 3 87 5.4E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0482 902fe6ceeeebeb17db863e538e7ea232 282 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.4E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_a0482 902fe6ceeeebeb17db863e538e7ea232 282 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.4E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_a0482 902fe6ceeeebeb17db863e538e7ea232 282 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.4E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_a0482 902fe6ceeeebeb17db863e538e7ea232 282 Gene3D G3DSA:1.10.10.10 2 90 1.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0482 902fe6ceeeebeb17db863e538e7ea232 282 SMART SM00226 117 255 3.1E-44 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TMO_a0482 902fe6ceeeebeb17db863e538e7ea232 282 SMART SM00418 8 89 3.3E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_2684 dbdd70823ccc44cf1c933c29ccae3967 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 224 3.5E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_2684 dbdd70823ccc44cf1c933c29ccae3967 234 Gene3D G3DSA:3.40.50.2300 1 126 3.8E-39 T 14-10-2018 TMO_2684 dbdd70823ccc44cf1c933c29ccae3967 234 Gene3D G3DSA:1.10.10.10 129 227 1.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2684 dbdd70823ccc44cf1c933c29ccae3967 234 SMART SM00448 1 116 3.3E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2684 dbdd70823ccc44cf1c933c29ccae3967 234 SUPERFAMILY SSF46894 131 224 1.16E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_2684 dbdd70823ccc44cf1c933c29ccae3967 234 Pfam PF00072 Response regulator receiver domain 3 117 1.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2684 dbdd70823ccc44cf1c933c29ccae3967 234 SUPERFAMILY SSF52172 1 128 1.99E-35 T 14-10-2018 IPR011006 CheY-like superfamily TMO_2684 dbdd70823ccc44cf1c933c29ccae3967 234 SMART SM00862 149 224 3.4E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_2098 316fec99c740c5eedefff3fa87f4254a 269 SMART SM00382 42 240 3.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2098 316fec99c740c5eedefff3fa87f4254a 269 SUPERFAMILY SSF52540 11 265 7.42E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2098 316fec99c740c5eedefff3fa87f4254a 269 PIRSF PIRSF037116 5 269 4.0E-139 T 14-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK TMO_2098 316fec99c740c5eedefff3fa87f4254a 269 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 16 267 2.7E-114 T 14-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK TMO_2098 316fec99c740c5eedefff3fa87f4254a 269 Gene3D G3DSA:3.40.50.300 15 269 7.4E-70 T 14-10-2018 TMO_2098 316fec99c740c5eedefff3fa87f4254a 269 Pfam PF00005 ABC transporter 34 190 8.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2098 316fec99c740c5eedefff3fa87f4254a 269 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 267 5.3E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_2098 316fec99c740c5eedefff3fa87f4254a 269 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3445 b3a107af60068895a8b1e8ecf39315b4 235 SUPERFAMILY SSF47413 73 143 9.38E-22 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_3445 b3a107af60068895a8b1e8ecf39315b4 235 Pfam PF01381 Helix-turn-helix 85 137 9.6E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_3445 b3a107af60068895a8b1e8ecf39315b4 235 Gene3D G3DSA:1.10.260.40 63 141 9.8E-15 T 14-10-2018 TMO_3445 b3a107af60068895a8b1e8ecf39315b4 235 SMART SM00530 82 137 1.9E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_b0344 b632f35b7cb317ae3c1dde18ddce9939 267 SMART SM00382 40 239 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0344 b632f35b7cb317ae3c1dde18ddce9939 267 Pfam PF00005 ABC transporter 31 191 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0344 b632f35b7cb317ae3c1dde18ddce9939 267 Gene3D G3DSA:3.40.50.300 16 265 3.5E-65 T 14-10-2018 TMO_b0344 b632f35b7cb317ae3c1dde18ddce9939 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0344 b632f35b7cb317ae3c1dde18ddce9939 267 SUPERFAMILY SSF52540 16 254 4.75E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0344 b632f35b7cb317ae3c1dde18ddce9939 267 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 16 267 2.1E-109 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 TMO_0233 27c2dd8e970f9d179a0725d220d837e2 227 SMART SM00419 169 217 7.3E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_0233 27c2dd8e970f9d179a0725d220d837e2 227 SUPERFAMILY SSF46785 148 225 5.9E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0233 27c2dd8e970f9d179a0725d220d837e2 227 Pfam PF00027 Cyclic nucleotide-binding domain 30 118 4.8E-22 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_0233 27c2dd8e970f9d179a0725d220d837e2 227 Pfam PF13545 Crp-like helix-turn-helix domain 151 224 2.2E-18 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_0233 27c2dd8e970f9d179a0725d220d837e2 227 SMART SM00100 12 133 2.1E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_0233 27c2dd8e970f9d179a0725d220d837e2 227 Gene3D G3DSA:2.60.120.10 8 147 3.9E-34 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_0233 27c2dd8e970f9d179a0725d220d837e2 227 SUPERFAMILY SSF51206 12 141 6.28E-33 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like TMO_0233 27c2dd8e970f9d179a0725d220d837e2 227 Gene3D G3DSA:1.10.10.10 148 226 6.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0413 5143b896fbda69bd9cf52b7442c3443f 308 SUPERFAMILY SSF53850 91 297 1.15E-38 T 14-10-2018 TMO_b0413 5143b896fbda69bd9cf52b7442c3443f 308 SUPERFAMILY SSF46785 3 113 5.62E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0413 5143b896fbda69bd9cf52b7442c3443f 308 Pfam PF03466 LysR substrate binding domain 90 295 1.5E-43 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0413 5143b896fbda69bd9cf52b7442c3443f 308 Gene3D G3DSA:1.10.10.10 4 94 1.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0413 5143b896fbda69bd9cf52b7442c3443f 308 Gene3D G3DSA:3.40.190.10 165 270 7.1E-49 T 14-10-2018 TMO_b0413 5143b896fbda69bd9cf52b7442c3443f 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0413 5143b896fbda69bd9cf52b7442c3443f 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0413 5143b896fbda69bd9cf52b7442c3443f 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0413 5143b896fbda69bd9cf52b7442c3443f 308 Gene3D G3DSA:3.40.190.10 95 293 7.1E-49 T 14-10-2018 TMO_b0413 5143b896fbda69bd9cf52b7442c3443f 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.2E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2550 e8fe98379db379f04a35e22df7d6c945 332 SUPERFAMILY SSF51726 32 329 3.84E-12 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TMO_2550 e8fe98379db379f04a35e22df7d6c945 332 Gene3D G3DSA:3.20.20.210 12 328 1.3E-13 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TMO_1568 e0a84093debc0411897968ccd10070dc 155 SUPERFAMILY SSF46785 3 147 1.03E-38 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1568 e0a84093debc0411897968ccd10070dc 155 SMART SM00347 32 135 4.9E-29 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1568 e0a84093debc0411897968ccd10070dc 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 3.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1568 e0a84093debc0411897968ccd10070dc 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 3.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1568 e0a84093debc0411897968ccd10070dc 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 3.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1568 e0a84093debc0411897968ccd10070dc 155 Gene3D G3DSA:1.10.10.10 3 147 1.7E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1568 e0a84093debc0411897968ccd10070dc 155 Pfam PF01047 MarR family 39 97 4.5E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 545 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 Gene3D G3DSA:3.30.450.20 206 346 8.2E-9 T 14-10-2018 TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 SUPERFAMILY SSF47384 343 425 5.49E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 SMART SM00387 471 592 1.2E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 SUPERFAMILY SSF55785 208 335 9.63E-7 T 14-10-2018 IPR035965 PAS domain superfamily TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 Pfam PF00512 His Kinase A (phospho-acceptor) domain 357 423 2.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 Pfam PF12860 PAS fold 228 341 1.7E-6 T 14-10-2018 TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 Gene3D G3DSA:3.30.565.10 428 598 1.3E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 SUPERFAMILY SSF55874 425 591 1.57E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 591 1.8E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 Gene3D G3DSA:1.10.287.130 347 427 4.3E-22 T 14-10-2018 TMO_c0561 acd31fb1eeb24ddcb46ecf6ddb0dab71 608 SMART SM00388 357 425 2.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0155 8872dd6443d513446abc3599ea0231f1 171 SUPERFAMILY SSF75217 2 150 3.79E-36 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases TMO_c0155 8872dd6443d513446abc3599ea0231f1 171 Pfam PF00588 SpoU rRNA Methylase family 2 142 1.2E-27 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TMO_c0155 8872dd6443d513446abc3599ea0231f1 171 PIRSF PIRSF029256 1 155 1.3E-49 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 TMO_c0155 8872dd6443d513446abc3599ea0231f1 171 Gene3D G3DSA:3.40.1280.10 1 156 7.1E-48 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_c0155 8872dd6443d513446abc3599ea0231f1 171 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 1 152 27.91 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 TMO_1253 2c2a7e183d5e3c1a203e66c41f94ca5a 675 Gene3D G3DSA:3.30.300.30 533 660 1.7E-9 T 14-10-2018 TMO_1253 2c2a7e183d5e3c1a203e66c41f94ca5a 675 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 9 658 4.1E-249 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 TMO_1253 2c2a7e183d5e3c1a203e66c41f94ca5a 675 Gene3D G3DSA:3.40.50.12780 89 532 1.9E-61 T 14-10-2018 TMO_1253 2c2a7e183d5e3c1a203e66c41f94ca5a 675 SUPERFAMILY SSF56801 25 656 8.11E-123 T 14-10-2018 TMO_1253 2c2a7e183d5e3c1a203e66c41f94ca5a 675 Pfam PF00501 AMP-binding enzyme 103 535 1.2E-51 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_1253 2c2a7e183d5e3c1a203e66c41f94ca5a 675 ProSitePatterns PS00455 Putative AMP-binding domain signature. 278 289 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_1253 2c2a7e183d5e3c1a203e66c41f94ca5a 675 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 42 95 8.6E-9 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 SUPERFAMILY SSF51905 8 385 1.14E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 Gene3D G3DSA:3.30.9.10 85 327 1.6E-131 T 14-10-2018 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 SUPERFAMILY SSF54373 233 326 9.42E-9 T 14-10-2018 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 12 29 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 Pfam PF01266 FAD dependent oxidoreductase 8 367 7.4E-53 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 Gene3D G3DSA:1.10.8.870 405 473 3.1E-21 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 392 498 2.1E-13 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 Gene3D G3DSA:3.50.50.60 8 377 1.6E-131 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 81 93 2.2E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 358 370 2.2E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 7 19 2.2E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 48 2.2E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 30 2.2E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 320 326 2.2E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_b0104 a9f45d1445e13cd44e5763dd6998abe3 513 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 363 373 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_3481 92eb7e0cb1340f3885394bca3eaf969a 921 SUPERFAMILY SSF52540 14 237 1.98E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3481 92eb7e0cb1340f3885394bca3eaf969a 921 Gene3D G3DSA:3.40.50.300 271 513 5.0E-62 T 14-10-2018 TMO_3481 92eb7e0cb1340f3885394bca3eaf969a 921 Pfam PF00005 ABC transporter 26 173 4.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3481 92eb7e0cb1340f3885394bca3eaf969a 921 Pfam PF12698 ABC-2 family transporter protein 573 912 4.9E-45 T 14-10-2018 TMO_3481 92eb7e0cb1340f3885394bca3eaf969a 921 Pfam PF00005 ABC transporter 292 435 1.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3481 92eb7e0cb1340f3885394bca3eaf969a 921 SUPERFAMILY SSF52540 274 495 2.77E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3481 92eb7e0cb1340f3885394bca3eaf969a 921 Gene3D G3DSA:3.40.50.300 6 248 1.7E-58 T 14-10-2018 TMO_3481 92eb7e0cb1340f3885394bca3eaf969a 921 SMART SM00382 35 256 5.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3481 92eb7e0cb1340f3885394bca3eaf969a 921 SMART SM00382 300 491 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3481 92eb7e0cb1340f3885394bca3eaf969a 921 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1710 a33ae7678c7c5f35a959e916eccb77e9 324 Gene3D G3DSA:1.10.1740.10 10 89 9.8E-10 T 14-10-2018 TMO_1710 a33ae7678c7c5f35a959e916eccb77e9 324 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 174 1.5E-16 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_1710 a33ae7678c7c5f35a959e916eccb77e9 324 SUPERFAMILY SSF88946 6 92 2.83E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_1710 a33ae7678c7c5f35a959e916eccb77e9 324 Gene3D G3DSA:1.10.10.10 120 179 5.6E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1710 a33ae7678c7c5f35a959e916eccb77e9 324 SUPERFAMILY SSF88659 119 174 1.18E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_1710 a33ae7678c7c5f35a959e916eccb77e9 324 SUPERFAMILY SSF54427 198 313 9.05E-9 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_1710 a33ae7678c7c5f35a959e916eccb77e9 324 Pfam PF04542 Sigma-70 region 2 20 87 3.3E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_1710 a33ae7678c7c5f35a959e916eccb77e9 324 Pfam PF08281 Sigma-70, region 4 121 173 1.5E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_2519 640b6042b783e3c30276f907ff407216 235 Gene3D G3DSA:1.25.40.10 26 225 2.3E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_2519 640b6042b783e3c30276f907ff407216 235 SUPERFAMILY SSF81901 35 209 3.31E-26 T 14-10-2018 TMO_2519 640b6042b783e3c30276f907ff407216 235 Pfam PF08238 Sel1 repeat 94 130 3.8E-5 T 14-10-2018 IPR006597 Sel1-like repeat TMO_2519 640b6042b783e3c30276f907ff407216 235 Pfam PF08238 Sel1 repeat 58 93 3.2E-4 T 14-10-2018 IPR006597 Sel1-like repeat TMO_2519 640b6042b783e3c30276f907ff407216 235 SMART SM00671 132 167 60.0 T 14-10-2018 IPR006597 Sel1-like repeat TMO_2519 640b6042b783e3c30276f907ff407216 235 SMART SM00671 58 93 1.0E-5 T 14-10-2018 IPR006597 Sel1-like repeat TMO_2519 640b6042b783e3c30276f907ff407216 235 SMART SM00671 168 201 240.0 T 14-10-2018 IPR006597 Sel1-like repeat TMO_2519 640b6042b783e3c30276f907ff407216 235 SMART SM00671 94 131 2.1 T 14-10-2018 IPR006597 Sel1-like repeat TMO_0092 fa9f3f3767b624b23d0aa8c01b4abd33 94 Gene3D G3DSA:3.30.70.1060 1 94 2.0E-34 T 14-10-2018 TMO_0092 fa9f3f3767b624b23d0aa8c01b4abd33 94 SUPERFAMILY SSF54909 1 91 5.36E-26 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_0092 fa9f3f3767b624b23d0aa8c01b4abd33 94 Pfam PF03795 YCII-related domain 1 88 2.2E-21 T 14-10-2018 IPR005545 YCII-related TMO_c0864 b0eb81e7dd6cf5ca558faf35121d9de0 367 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 8 94 1.7E-12 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 TMO_c0864 b0eb81e7dd6cf5ca558faf35121d9de0 367 Gene3D G3DSA:3.30.310.50 3 96 7.4E-5 T 14-10-2018 TMO_c0864 b0eb81e7dd6cf5ca558faf35121d9de0 367 Pfam PF04954 Siderophore-interacting protein 230 351 3.1E-31 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain TMO_c0864 b0eb81e7dd6cf5ca558faf35121d9de0 367 Gene3D G3DSA:2.40.30.10 97 225 3.7E-37 T 14-10-2018 TMO_c0864 b0eb81e7dd6cf5ca558faf35121d9de0 367 Gene3D G3DSA:3.40.50.80 227 362 5.0E-39 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_c0864 b0eb81e7dd6cf5ca558faf35121d9de0 367 Pfam PF08021 Siderophore-interacting FAD-binding domain 112 224 1.8E-30 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting TMO_c0864 b0eb81e7dd6cf5ca558faf35121d9de0 367 SUPERFAMILY SSF63380 104 225 7.07E-8 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TMO_0516 d05da2bfc663c434260f22d3825a4c07 163 Gene3D G3DSA:3.90.960.10 4 163 2.2E-50 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TMO_0516 d05da2bfc663c434260f22d3825a4c07 163 Pfam PF04073 Aminoacyl-tRNA editing domain 40 152 1.9E-24 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_0516 d05da2bfc663c434260f22d3825a4c07 163 PIRSF PIRSF006181 6 163 2.6E-49 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC TMO_0516 d05da2bfc663c434260f22d3825a4c07 163 SUPERFAMILY SSF55826 11 161 1.19E-41 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TMO_0516 d05da2bfc663c434260f22d3825a4c07 163 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 11 161 6.3E-51 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC TMO_c0717 4fc06cd2aa82da7af8038e929d6763dc 383 SUPERFAMILY SSF51182 57 372 2.74E-89 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0717 4fc06cd2aa82da7af8038e929d6763dc 383 Gene3D G3DSA:2.60.120.10 66 165 3.0E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_c0717 4fc06cd2aa82da7af8038e929d6763dc 383 Gene3D G3DSA:2.60.120.10 259 351 4.9E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_c0717 4fc06cd2aa82da7af8038e929d6763dc 383 Pfam PF04209 homogentisate 1,2-dioxygenase 88 372 1.2E-28 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 TMO_2163 6c52b85a71007730078a6d0f016530c4 347 SUPERFAMILY SSF51735 18 270 4.23E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2163 6c52b85a71007730078a6d0f016530c4 347 Pfam PF00106 short chain dehydrogenase 22 211 6.2E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2163 6c52b85a71007730078a6d0f016530c4 347 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 1.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2163 6c52b85a71007730078a6d0f016530c4 347 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 1.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2163 6c52b85a71007730078a6d0f016530c4 347 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 1.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2163 6c52b85a71007730078a6d0f016530c4 347 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 1.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2163 6c52b85a71007730078a6d0f016530c4 347 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_2163 6c52b85a71007730078a6d0f016530c4 347 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 21 204 0.001 T 14-10-2018 TMO_2163 6c52b85a71007730078a6d0f016530c4 347 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 3.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2163 6c52b85a71007730078a6d0f016530c4 347 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 3.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2163 6c52b85a71007730078a6d0f016530c4 347 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 3.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2163 6c52b85a71007730078a6d0f016530c4 347 Gene3D G3DSA:3.40.50.720 3 282 9.9E-67 T 14-10-2018 TMO_3284 f6aa07a4da78264c152a07a9a138503f 432 Pfam PF00012 Hsp70 protein 311 422 2.4E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3284 f6aa07a4da78264c152a07a9a138503f 432 Gene3D G3DSA:3.90.640.10 311 352 4.1E-22 T 14-10-2018 TMO_3284 f6aa07a4da78264c152a07a9a138503f 432 Gene3D G3DSA:3.90.640.10 225 244 7.8E-25 T 14-10-2018 TMO_3284 f6aa07a4da78264c152a07a9a138503f 432 SUPERFAMILY SSF53067 8 181 9.71E-16 T 14-10-2018 TMO_3284 f6aa07a4da78264c152a07a9a138503f 432 Gene3D G3DSA:3.30.420.40 9 182 7.8E-25 T 14-10-2018 TMO_3284 f6aa07a4da78264c152a07a9a138503f 432 Gene3D G3DSA:3.30.420.40 353 410 4.1E-22 T 14-10-2018 TMO_3284 f6aa07a4da78264c152a07a9a138503f 432 PRINTS PR00301 70kDa heat shock protein signature 377 393 7.7E-5 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3284 f6aa07a4da78264c152a07a9a138503f 432 PRINTS PR00301 70kDa heat shock protein signature 7 20 7.7E-5 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TMO_3284 f6aa07a4da78264c152a07a9a138503f 432 Gene3D G3DSA:3.30.420.40 183 224 7.8E-25 T 14-10-2018 TMO_3284 f6aa07a4da78264c152a07a9a138503f 432 SUPERFAMILY SSF53067 187 423 1.91E-35 T 14-10-2018 TMO_3493 a52157a7a5d71ddecb704872bff506d6 288 Pfam PF03180 NLPA lipoprotein 52 288 1.3E-88 T 14-10-2018 IPR004872 Lipoprotein NlpA family TMO_3493 a52157a7a5d71ddecb704872bff506d6 288 Gene3D G3DSA:3.40.190.10 54 282 6.1E-93 T 14-10-2018 TMO_3493 a52157a7a5d71ddecb704872bff506d6 288 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 35 288 4.9E-77 T 14-10-2018 IPR004872 Lipoprotein NlpA family TMO_3493 a52157a7a5d71ddecb704872bff506d6 288 SUPERFAMILY SSF53850 51 288 3.93E-81 T 14-10-2018 TMO_3493 a52157a7a5d71ddecb704872bff506d6 288 Gene3D G3DSA:3.40.190.10 133 237 6.1E-93 T 14-10-2018 TMO_3493 a52157a7a5d71ddecb704872bff506d6 288 PIRSF PIRSF002854 19 288 2.4E-99 T 14-10-2018 IPR004872 Lipoprotein NlpA family TMO_3178 dd7a3f882b861b8a89aee4a93efbf413 269 SUPERFAMILY SSF53613 11 258 8.94E-52 T 14-10-2018 IPR029056 Ribokinase-like TMO_3178 dd7a3f882b861b8a89aee4a93efbf413 269 PIRSF PIRSF000513 7 267 5.2E-84 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_3178 dd7a3f882b861b8a89aee4a93efbf413 269 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 15 261 30.629 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_3178 dd7a3f882b861b8a89aee4a93efbf413 269 Pfam PF02110 Hydroxyethylthiazole kinase family 15 256 7.0E-73 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_3178 dd7a3f882b861b8a89aee4a93efbf413 269 Gene3D G3DSA:3.40.1190.20 1 265 9.8E-87 T 14-10-2018 IPR029056 Ribokinase-like TMO_3178 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 165 182 8.4E-35 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_3178 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 21 28 8.4E-35 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_3178 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 91 108 8.4E-35 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_3178 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 34 55 8.4E-35 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_3178 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 65 73 8.4E-35 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_3178 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 121 135 8.4E-35 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_2037 a5667a6465ad43afa88d8c98059c88d7 449 Pfam PF07690 Major Facilitator Superfamily 29 398 2.1E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_2037 a5667a6465ad43afa88d8c98059c88d7 449 SUPERFAMILY SSF103473 15 441 1.83E-66 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2037 a5667a6465ad43afa88d8c98059c88d7 449 Gene3D G3DSA:1.20.1250.20 222 446 1.1E-16 T 14-10-2018 TMO_2037 a5667a6465ad43afa88d8c98059c88d7 449 Gene3D G3DSA:1.20.1250.20 16 211 4.5E-42 T 14-10-2018 TMO_b0239 bd1bd72e92bbfe7d14da8b3cb98f9f61 429 SUPERFAMILY SSF53822 42 398 3.7E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_b0239 bd1bd72e92bbfe7d14da8b3cb98f9f61 429 Gene3D G3DSA:3.40.50.2300 63 384 3.0E-78 T 14-10-2018 TMO_b0239 bd1bd72e92bbfe7d14da8b3cb98f9f61 429 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 65 81 1.2E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0239 bd1bd72e92bbfe7d14da8b3cb98f9f61 429 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 307 320 1.2E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0239 bd1bd72e92bbfe7d14da8b3cb98f9f61 429 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 43 59 1.2E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0239 bd1bd72e92bbfe7d14da8b3cb98f9f61 429 Pfam PF13458 Periplasmic binding protein 42 392 2.1E-52 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_b0239 bd1bd72e92bbfe7d14da8b3cb98f9f61 429 Gene3D G3DSA:3.40.50.2300 161 392 3.0E-78 T 14-10-2018 TMO_c0397 9a21bcf7a832e93d1eefd537e8d3a644 185 Gene3D G3DSA:1.10.10.10 2 164 8.4E-52 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0397 9a21bcf7a832e93d1eefd537e8d3a644 185 SUPERFAMILY SSF46785 6 144 2.88E-41 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0397 9a21bcf7a832e93d1eefd537e8d3a644 185 Pfam PF01638 HxlR-like helix-turn-helix 19 106 8.0E-23 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type TMO_a0127 1219901670417a0bed5e924968f0f891 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 322 1.5E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_a0127 1219901670417a0bed5e924968f0f891 328 Pfam PF00005 ABC transporter 31 184 1.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0127 1219901670417a0bed5e924968f0f891 328 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0127 1219901670417a0bed5e924968f0f891 328 SUPERFAMILY SSF52540 5 254 2.15E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0127 1219901670417a0bed5e924968f0f891 328 SMART SM00382 39 233 1.3E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0127 1219901670417a0bed5e924968f0f891 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 303 1.0E-13 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_a0127 1219901670417a0bed5e924968f0f891 328 Gene3D G3DSA:3.40.50.300 2 326 5.8E-87 T 14-10-2018 TMO_1693 c9880f549ae44e60f7e85c72c08c863f 307 TIGRFAM TIGR00444 mazG: MazG family protein 28 286 7.9E-87 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG TMO_1693 c9880f549ae44e60f7e85c72c08c863f 307 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 45 118 6.3E-27 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TMO_1693 c9880f549ae44e60f7e85c72c08c863f 307 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 193 251 1.8E-10 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TMO_1693 c9880f549ae44e60f7e85c72c08c863f 307 SUPERFAMILY SSF101386 20 120 3.74E-24 T 14-10-2018 TMO_1693 c9880f549ae44e60f7e85c72c08c863f 307 SUPERFAMILY SSF101386 164 260 5.23E-24 T 14-10-2018 TMO_1693 c9880f549ae44e60f7e85c72c08c863f 307 Gene3D G3DSA:1.10.287.1080 18 143 6.7E-46 T 14-10-2018 TMO_1693 c9880f549ae44e60f7e85c72c08c863f 307 Gene3D G3DSA:1.10.287.1080 156 291 8.8E-42 T 14-10-2018 TMO_3131 7e09a77781e5b81a8b9c300d04bfc3ed 356 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 326 2.0E-48 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_3131 7e09a77781e5b81a8b9c300d04bfc3ed 356 Gene3D G3DSA:3.40.190.170 36 355 1.2E-100 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_3131 7e09a77781e5b81a8b9c300d04bfc3ed 356 SUPERFAMILY SSF53850 36 271 2.72E-5 T 14-10-2018 TMO_0880 be1476c261f2e9ae45367406bc0035cd 222 Pfam PF02581 Thiamine monophosphate synthase 9 188 9.3E-53 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_0880 be1476c261f2e9ae45367406bc0035cd 222 Gene3D G3DSA:3.20.20.70 2 212 6.2E-60 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_0880 be1476c261f2e9ae45367406bc0035cd 222 SUPERFAMILY SSF51391 4 205 4.97E-60 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_0880 be1476c261f2e9ae45367406bc0035cd 222 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 8 194 3.7E-51 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_0880 be1476c261f2e9ae45367406bc0035cd 222 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 209 22.773 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_b0518 70ea6ae3235bb87daf8e4665721cf3ad 311 Gene3D G3DSA:3.40.50.300 3 311 5.8E-82 T 14-10-2018 TMO_b0518 70ea6ae3235bb87daf8e4665721cf3ad 311 PIRSF PIRSF000545 3 311 2.0E-127 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TMO_b0518 70ea6ae3235bb87daf8e4665721cf3ad 311 Hamap MF_00215 Pantothenate kinase [coaA]. 1 311 155.084 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TMO_b0518 70ea6ae3235bb87daf8e4665721cf3ad 311 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 11 309 9.2E-119 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TMO_b0518 70ea6ae3235bb87daf8e4665721cf3ad 311 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 89 227 2.5E-9 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 TMO_b0518 70ea6ae3235bb87daf8e4665721cf3ad 311 SUPERFAMILY SSF52540 11 309 3.97E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0288 9a1cd0ee647ea0dd4321ed89fb095231 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 527 4.2E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0288 9a1cd0ee647ea0dd4321ed89fb095231 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0288 9a1cd0ee647ea0dd4321ed89fb095231 555 Pfam PF00501 AMP-binding enzyme 41 439 3.3E-70 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0288 9a1cd0ee647ea0dd4321ed89fb095231 555 Gene3D G3DSA:3.30.300.310 436 542 2.7E-31 T 14-10-2018 TMO_c0288 9a1cd0ee647ea0dd4321ed89fb095231 555 Gene3D G3DSA:3.40.50.12780 35 432 8.6E-84 T 14-10-2018 TMO_c0288 9a1cd0ee647ea0dd4321ed89fb095231 555 SUPERFAMILY SSF56801 34 541 4.06E-120 T 14-10-2018 TMO_1070 aa42b2d67c14686bb2b9fc7e63741bf3 172 Gene3D G3DSA:2.30.110.10 25 159 1.8E-12 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_1070 aa42b2d67c14686bb2b9fc7e63741bf3 172 SUPERFAMILY SSF50475 19 152 7.64E-7 T 14-10-2018 TMO_a0506 92d3961eab4d104859f607e8f91172e7 246 SUPERFAMILY SSF51735 1 244 1.66E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0506 92d3961eab4d104859f607e8f91172e7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0506 92d3961eab4d104859f607e8f91172e7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0506 92d3961eab4d104859f607e8f91172e7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0506 92d3961eab4d104859f607e8f91172e7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0506 92d3961eab4d104859f607e8f91172e7 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 244 7.5E-46 T 14-10-2018 TMO_a0506 92d3961eab4d104859f607e8f91172e7 246 Gene3D G3DSA:3.40.50.720 1 246 7.9E-60 T 14-10-2018 TMO_b0064 8e474ee64646f680362be788a6761e66 340 Gene3D G3DSA:3.40.710.10 18 327 1.1E-58 T 14-10-2018 TMO_b0064 8e474ee64646f680362be788a6761e66 340 Pfam PF00144 Beta-lactamase 52 318 4.8E-22 T 14-10-2018 IPR001466 Beta-lactamase-related TMO_b0064 8e474ee64646f680362be788a6761e66 340 SUPERFAMILY SSF56601 25 320 4.22E-65 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_0513 ce5a55b32a71daf6114669d048cfcb6f 543 Gene3D G3DSA:3.40.50.12780 27 434 4.5E-110 T 14-10-2018 TMO_0513 ce5a55b32a71daf6114669d048cfcb6f 543 SUPERFAMILY SSF56801 24 537 9.55E-148 T 14-10-2018 TMO_0513 ce5a55b32a71daf6114669d048cfcb6f 543 Gene3D G3DSA:3.30.300.310 437 539 6.1E-29 T 14-10-2018 TMO_0513 ce5a55b32a71daf6114669d048cfcb6f 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 525 1.9E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0513 ce5a55b32a71daf6114669d048cfcb6f 543 Pfam PF00501 AMP-binding enzyme 39 441 3.3E-93 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0513 ce5a55b32a71daf6114669d048cfcb6f 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Gene3D G3DSA:1.10.1200.10 1139 1226 1.5E-26 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Pfam PF00550 Phosphopantetheine attachment site 1155 1218 3.2E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1177 1192 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 SMART SM00823 Phosphopantetheine attachment site 1153 1222 0.0027 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 SUPERFAMILY SSF53901 16 436 2.03E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Pfam PF08659 KR domain 857 1060 2.6E-34 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 SUPERFAMILY SSF52777 1258 1429 2.56E-47 T 14-10-2018 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 SUPERFAMILY SSF51735 637 837 2.1E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 270 387 3.3E-40 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 SMART SM00825 Beta-ketoacyl synthase 21 440 3.9E-161 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Gene3D G3DSA:3.30.70.3050 475 573 2.7E-167 T 14-10-2018 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 SUPERFAMILY SSF47336 1145 1218 1.7E-18 T 14-10-2018 IPR036736 ACP-like superfamily TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Gene3D G3DSA:3.40.50.720 593 1138 4.7E-78 T 14-10-2018 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 SUPERFAMILY SSF52777 1436 1684 8.0E-51 T 14-10-2018 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 857 1061 1.8E-27 T 14-10-2018 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Gene3D G3DSA:3.30.559.10 1257 1622 3.7E-134 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Gene3D G3DSA:3.30.559.30 1433 1678 3.7E-134 T 14-10-2018 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 175 191 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 SUPERFAMILY SSF51735 853 1079 7.37E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Gene3D G3DSA:3.40.47.10 21 591 2.7E-167 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Pfam PF00668 Condensation domain 1256 1692 4.1E-81 T 14-10-2018 IPR001242 Condensation domain TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 390 465 2.2E-11 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 TMO_c0606 a717a84153ad66d64adfe020e1b588a9 1705 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 20 262 1.0E-61 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TMO_2330 ea3a39e6d8c6c7a83ddd475467f7433d 641 Gene3D G3DSA:1.20.1530.20 4 399 5.9E-15 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily TMO_2330 ea3a39e6d8c6c7a83ddd475467f7433d 641 SMART SM01091 491 571 1.2E-7 T 14-10-2018 IPR005170 Transporter-associated domain TMO_2330 ea3a39e6d8c6c7a83ddd475467f7433d 641 SUPERFAMILY SSF56176 496 559 8.72E-6 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_2330 ea3a39e6d8c6c7a83ddd475467f7433d 641 Pfam PF00999 Sodium/hydrogen exchanger family 14 393 1.4E-49 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TMO_2330 ea3a39e6d8c6c7a83ddd475467f7433d 641 Pfam PF03471 Transporter associated domain 495 569 1.1E-7 T 14-10-2018 IPR005170 Transporter-associated domain TMO_1906 012a34aa8cf678a0410c37c3d1483570 348 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 29 266 6.4E-16 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region TMO_1906 012a34aa8cf678a0410c37c3d1483570 348 SUPERFAMILY SSF63829 7 341 2.83E-38 T 14-10-2018 TMO_1906 012a34aa8cf678a0410c37c3d1483570 348 Gene3D G3DSA:2.120.10.30 64 276 8.4E-24 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TMO_c0018 15540c89dddd70ba08608142002cfb66 361 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 17 344 3.4E-117 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 TMO_c0018 15540c89dddd70ba08608142002cfb66 361 PIRSF PIRSF005508 4 356 1.2E-117 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 TMO_c0018 15540c89dddd70ba08608142002cfb66 361 Pfam PF01758 Sodium Bile acid symporter family 63 257 3.8E-35 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 TMO_c0018 15540c89dddd70ba08608142002cfb66 361 Gene3D G3DSA:1.20.1530.20 13 346 1.2E-19 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily TMO_0452 389ac5d9a3b456e63f09e1717139ad68 243 SMART SM00448 8 118 1.0E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0452 389ac5d9a3b456e63f09e1717139ad68 243 Gene3D G3DSA:1.10.10.10 138 242 6.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0452 389ac5d9a3b456e63f09e1717139ad68 243 SMART SM00862 164 240 1.3E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_0452 389ac5d9a3b456e63f09e1717139ad68 243 SUPERFAMILY SSF52172 5 198 2.42E-38 T 14-10-2018 IPR011006 CheY-like superfamily TMO_0452 389ac5d9a3b456e63f09e1717139ad68 243 Gene3D G3DSA:3.40.50.2300 3 131 9.0E-35 T 14-10-2018 TMO_0452 389ac5d9a3b456e63f09e1717139ad68 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 240 2.0E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_0452 389ac5d9a3b456e63f09e1717139ad68 243 Pfam PF00072 Response regulator receiver domain 10 119 6.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0035 3b4fe644ec660f5c5dbed7284e5b436a 154 Pfam PF00293 NUDIX domain 14 132 1.1E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_0035 3b4fe644ec660f5c5dbed7284e5b436a 154 Gene3D G3DSA:3.90.79.10 11 150 1.3E-26 T 14-10-2018 TMO_0035 3b4fe644ec660f5c5dbed7284e5b436a 154 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_0035 3b4fe644ec660f5c5dbed7284e5b436a 154 PRINTS PR00502 NUDIX hydrolase family signature 56 71 8.6E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TMO_0035 3b4fe644ec660f5c5dbed7284e5b436a 154 PRINTS PR00502 NUDIX hydrolase family signature 42 56 8.6E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TMO_0035 3b4fe644ec660f5c5dbed7284e5b436a 154 SUPERFAMILY SSF55811 7 135 4.74E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TMO_a0083 678d3b99b8d923d1068630670b4a511b 343 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 28 324 3.6E-81 T 14-10-2018 IPR010732 Type VI secretion, TssG-like TMO_a0083 678d3b99b8d923d1068630670b4a511b 343 Pfam PF06996 Type VI secretion, TssG 27 324 3.1E-83 T 14-10-2018 IPR010732 Type VI secretion, TssG-like TMO_d0045 79f2f4f7f79362dd572a47ef0318d1bd 243 Gene3D G3DSA:3.40.50.300 1 243 2.5E-79 T 14-10-2018 TMO_d0045 79f2f4f7f79362dd572a47ef0318d1bd 243 PIRSF PIRSF039085 1 241 3.6E-114 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TMO_d0045 79f2f4f7f79362dd572a47ef0318d1bd 243 SMART SM00382 26 213 7.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_d0045 79f2f4f7f79362dd572a47ef0318d1bd 243 Pfam PF00005 ABC transporter 17 165 2.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_d0045 79f2f4f7f79362dd572a47ef0318d1bd 243 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_d0045 79f2f4f7f79362dd572a47ef0318d1bd 243 SUPERFAMILY SSF52540 1 235 5.94E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1747 1b9000c797d80b5fbd6f2a8796743159 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 18 280 52.651 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TMO_1747 1b9000c797d80b5fbd6f2a8796743159 284 SUPERFAMILY SSF51569 10 279 4.85E-103 T 14-10-2018 TMO_1747 1b9000c797d80b5fbd6f2a8796743159 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 23 278 5.0E-121 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TMO_1747 1b9000c797d80b5fbd6f2a8796743159 284 Gene3D G3DSA:3.20.20.70 7 282 2.2E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1747 1b9000c797d80b5fbd6f2a8796743159 284 Pfam PF00793 DAHP synthetase I family 18 265 6.9E-64 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TMO_a0287 cde9f957667f63a10925fcfb476157fd 217 Gene3D G3DSA:3.40.50.850 8 210 3.7E-67 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_a0287 cde9f957667f63a10925fcfb476157fd 217 Pfam PF00857 Isochorismatase family 27 202 1.4E-39 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_a0287 cde9f957667f63a10925fcfb476157fd 217 SUPERFAMILY SSF52499 11 207 1.57E-51 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_c0758 8f98f8157b833726279747bd5620a67f 413 Gene3D G3DSA:3.90.1860.10 14 413 9.3E-116 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 TMO_c0758 8f98f8157b833726279747bd5620a67f 413 Pfam PF01139 tRNA-splicing ligase RtcB 37 413 4.1E-131 T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 TMO_c0758 8f98f8157b833726279747bd5620a67f 413 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 37 66 - T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 TMO_c0758 8f98f8157b833726279747bd5620a67f 413 SUPERFAMILY SSF103365 18 413 1.06E-135 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 TMO_3010 873d5fad0f5574ea9faf6006399a6f7c 392 Gene3D G3DSA:3.40.50.300 71 216 1.1E-17 T 14-10-2018 TMO_3010 873d5fad0f5574ea9faf6006399a6f7c 392 Pfam PF03969 AFG1-like ATPase 13 387 9.2E-127 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 TMO_3010 873d5fad0f5574ea9faf6006399a6f7c 392 SUPERFAMILY SSF52540 82 209 8.78E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0048 6f7827e988e0e55dbee40f614fc98000 304 Gene3D G3DSA:3.40.50.300 23 231 2.6E-36 T 14-10-2018 TMO_c0048 6f7827e988e0e55dbee40f614fc98000 304 SUPERFAMILY SSF52540 29 293 6.49E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0048 6f7827e988e0e55dbee40f614fc98000 304 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 68 86 1.6E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_c0048 6f7827e988e0e55dbee40f614fc98000 304 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 140 158 1.6E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_c0048 6f7827e988e0e55dbee40f614fc98000 304 SMART SM00382 64 212 3.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0048 6f7827e988e0e55dbee40f614fc98000 304 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 68 212 1.1E-24 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_b0142 29fe7c75f7aa4b64f6dc28fc1b3d3b9f 274 SUPERFAMILY SSF55729 8 218 3.6E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_b0142 29fe7c75f7aa4b64f6dc28fc1b3d3b9f 274 Gene3D G3DSA:3.40.630.30 4 142 1.6E-17 T 14-10-2018 TMO_b0142 29fe7c75f7aa4b64f6dc28fc1b3d3b9f 274 Pfam PF00583 Acetyltransferase (GNAT) family 39 117 3.0E-6 T 14-10-2018 IPR000182 GNAT domain TMO_b0142 29fe7c75f7aa4b64f6dc28fc1b3d3b9f 274 Gene3D G3DSA:3.40.630.90 147 253 2.7E-5 T 14-10-2018 TMO_2532 30fa64850c7d03bce5bac9ee3e8b1e06 314 Pfam PF02515 CoA-transferase family III 1 307 1.5E-94 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_2532 30fa64850c7d03bce5bac9ee3e8b1e06 314 SUPERFAMILY SSF89796 1 312 9.94E-98 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_2532 30fa64850c7d03bce5bac9ee3e8b1e06 314 Gene3D G3DSA:3.30.1540.10 164 255 3.0E-99 T 14-10-2018 TMO_2532 30fa64850c7d03bce5bac9ee3e8b1e06 314 Gene3D G3DSA:3.40.50.10540 1 287 3.0E-99 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_a0439 da65fdc0ee604d75f059275ccef01039 450 SUPERFAMILY SSF103378 14 441 3.92E-94 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 TMO_a0439 da65fdc0ee604d75f059275ccef01039 450 Pfam PF03972 MmgE/PrpD family 14 433 6.0E-98 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 TMO_a0439 da65fdc0ee604d75f059275ccef01039 450 Gene3D G3DSA:1.10.4100.10 33 411 2.6E-98 T 14-10-2018 TMO_a0439 da65fdc0ee604d75f059275ccef01039 450 Gene3D G3DSA:3.30.1330.120 272 394 2.6E-98 T 14-10-2018 TMO_2138 939152b51995ac8b152144d7b7db0458 405 Pfam PF13458 Periplasmic binding protein 32 368 9.1E-88 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_2138 939152b51995ac8b152144d7b7db0458 405 Gene3D G3DSA:3.40.50.2300 55 361 1.5E-111 T 14-10-2018 TMO_2138 939152b51995ac8b152144d7b7db0458 405 Gene3D G3DSA:3.40.50.2300 151 369 1.5E-111 T 14-10-2018 TMO_2138 939152b51995ac8b152144d7b7db0458 405 SUPERFAMILY SSF53822 32 403 8.07E-94 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_1823 c06a8dc3ddfc400d9c234ca1babcd714 344 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 116 330 1.8E-54 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 TMO_1823 c06a8dc3ddfc400d9c234ca1babcd714 344 Gene3D G3DSA:3.40.430.10 112 335 4.5E-70 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TMO_1823 c06a8dc3ddfc400d9c234ca1babcd714 344 SUPERFAMILY SSF53927 3 112 1.91E-30 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TMO_1823 c06a8dc3ddfc400d9c234ca1babcd714 344 Pfam PF01872 RibD C-terminal domain 117 317 1.0E-47 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 TMO_1823 c06a8dc3ddfc400d9c234ca1babcd714 344 Gene3D G3DSA:3.40.140.10 1 111 4.1E-28 T 14-10-2018 TMO_1823 c06a8dc3ddfc400d9c234ca1babcd714 344 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 69 1.9E-7 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain TMO_1823 c06a8dc3ddfc400d9c234ca1babcd714 344 SUPERFAMILY SSF53597 115 332 8.77E-59 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TMO_1823 c06a8dc3ddfc400d9c234ca1babcd714 344 PIRSF PIRSF006769 1 338 1.5E-110 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 TMO_1823 c06a8dc3ddfc400d9c234ca1babcd714 344 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 20 58 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TMO_1823 c06a8dc3ddfc400d9c234ca1babcd714 344 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 3 332 2.7E-88 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 Gene3D G3DSA:1.10.220.30 94 199 7.1E-25 T 14-10-2018 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 SUPERFAMILY SSF48029 13 121 1.24E-19 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 339 1.7E-78 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 PIRSF PIRSF003161 5 339 9.1E-111 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 Pfam PF14841 FliG middle domain 122 194 4.0E-24 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 Pfam PF14842 FliG N-terminal domain 11 113 5.9E-26 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 Gene3D G3DSA:1.10.220.30 201 339 1.5E-42 T 14-10-2018 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 SUPERFAMILY SSF48029 122 330 3.66E-62 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 2.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 2.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 40 66 2.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 120 143 2.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 2.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 2.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 11 27 2.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 Pfam PF01706 FliG C-terminal domain 223 329 4.2E-39 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal TMO_1245 ff0521fbdfedb769b3966f2f6beb2fc9 340 Gene3D G3DSA:1.10.220.30 6 86 2.2E-17 T 14-10-2018 TMO_2442 6b7b44354f4b465fa60e1f97e1926ada 144 SMART SM00116 13 60 2.7E-8 T 14-10-2018 IPR000644 CBS domain TMO_2442 6b7b44354f4b465fa60e1f97e1926ada 144 SMART SM00116 78 126 1.5E-7 T 14-10-2018 IPR000644 CBS domain TMO_2442 6b7b44354f4b465fa60e1f97e1926ada 144 Pfam PF00571 CBS domain 71 123 3.7E-12 T 14-10-2018 IPR000644 CBS domain TMO_2442 6b7b44354f4b465fa60e1f97e1926ada 144 Pfam PF00571 CBS domain 13 60 3.1E-11 T 14-10-2018 IPR000644 CBS domain TMO_2442 6b7b44354f4b465fa60e1f97e1926ada 144 SUPERFAMILY SSF54631 1 141 6.06E-35 T 14-10-2018 TMO_2442 6b7b44354f4b465fa60e1f97e1926ada 144 Gene3D G3DSA:3.10.580.10 1 142 1.4E-43 T 14-10-2018 TMO_0790 c1694969390f86068a84dc93e97e3486 265 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 255 39.522 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 TMO_0790 c1694969390f86068a84dc93e97e3486 265 Gene3D G3DSA:3.30.750.180 104 231 1.4E-84 T 14-10-2018 TMO_0790 c1694969390f86068a84dc93e97e3486 265 Pfam PF00149 Calcineurin-like phosphoesterase 2 197 2.9E-16 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TMO_0790 c1694969390f86068a84dc93e97e3486 265 Gene3D G3DSA:3.60.21.40 1 240 1.4E-84 T 14-10-2018 TMO_0790 c1694969390f86068a84dc93e97e3486 265 SUPERFAMILY SSF56300 1 259 3.34E-57 T 14-10-2018 TMO_1542 22447a3120043b7b6a8f083ae75357d9 434 Gene3D G3DSA:2.70.70.10 292 434 3.2E-41 T 14-10-2018 IPR011055 Duplicated hybrid motif TMO_1542 22447a3120043b7b6a8f083ae75357d9 434 SMART SM00257 50 94 5.3E-12 T 14-10-2018 IPR018392 LysM domain TMO_1542 22447a3120043b7b6a8f083ae75357d9 434 SMART SM00257 98 142 4.9E-11 T 14-10-2018 IPR018392 LysM domain TMO_1542 22447a3120043b7b6a8f083ae75357d9 434 Pfam PF01551 Peptidase family M23 333 427 3.3E-30 T 14-10-2018 IPR016047 Peptidase M23 TMO_1542 22447a3120043b7b6a8f083ae75357d9 434 SUPERFAMILY SSF54106 97 142 2.75E-9 T 14-10-2018 TMO_1542 22447a3120043b7b6a8f083ae75357d9 434 SUPERFAMILY SSF54106 52 94 6.67E-9 T 14-10-2018 TMO_1542 22447a3120043b7b6a8f083ae75357d9 434 SUPERFAMILY SSF51261 299 431 2.09E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif TMO_1542 22447a3120043b7b6a8f083ae75357d9 434 Gene3D G3DSA:3.10.350.10 45 96 7.6E-13 T 14-10-2018 IPR036779 LysM domain superfamily TMO_1542 22447a3120043b7b6a8f083ae75357d9 434 Gene3D G3DSA:3.10.350.10 97 151 4.7E-13 T 14-10-2018 IPR036779 LysM domain superfamily TMO_1542 22447a3120043b7b6a8f083ae75357d9 434 Pfam PF01476 LysM domain 52 94 2.3E-13 T 14-10-2018 IPR018392 LysM domain TMO_1542 22447a3120043b7b6a8f083ae75357d9 434 Pfam PF01476 LysM domain 99 142 7.4E-12 T 14-10-2018 IPR018392 LysM domain TMO_2461 67850420caab7d029fb2425ce0c0a9ca 299 SUPERFAMILY SSF161111 6 209 3.66E-27 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_2461 67850420caab7d029fb2425ce0c0a9ca 299 Pfam PF01545 Cation efflux family 10 209 6.6E-29 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_2461 67850420caab7d029fb2425ce0c0a9ca 299 Gene3D G3DSA:1.20.1510.10 7 211 2.2E-19 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_1289 fd76c597533ba7d42dd21501a3afbca4 345 Gene3D G3DSA:3.40.50.2300 51 318 1.1E-70 T 14-10-2018 TMO_1289 fd76c597533ba7d42dd21501a3afbca4 345 Pfam PF13407 Periplasmic binding protein domain 49 288 9.5E-51 T 14-10-2018 IPR025997 Periplasmic binding protein TMO_1289 fd76c597533ba7d42dd21501a3afbca4 345 Gene3D G3DSA:3.40.50.2300 142 326 1.1E-70 T 14-10-2018 TMO_1289 fd76c597533ba7d42dd21501a3afbca4 345 SUPERFAMILY SSF53822 39 311 8.95E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_3242 10dbac4426872cb7490008d7ef720f5a 1163 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 468 2.5E-47 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TMO_3242 10dbac4426872cb7490008d7ef720f5a 1163 Gene3D G3DSA:3.40.50.300 565 668 4.8E-11 T 14-10-2018 TMO_3242 10dbac4426872cb7490008d7ef720f5a 1163 SUPERFAMILY SSF52980 989 1125 2.84E-7 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TMO_3242 10dbac4426872cb7490008d7ef720f5a 1163 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 4 1141 0.0 T 14-10-2018 IPR014151 DNA helicase, AddA type TMO_3242 10dbac4426872cb7490008d7ef720f5a 1163 Gene3D G3DSA:3.40.50.300 741 893 3.1E-21 T 14-10-2018 TMO_3242 10dbac4426872cb7490008d7ef720f5a 1163 Pfam PF13361 UvrD-like helicase C-terminal domain 746 877 5.9E-13 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TMO_3242 10dbac4426872cb7490008d7ef720f5a 1163 Gene3D G3DSA:3.40.50.300 342 507 3.0E-26 T 14-10-2018 TMO_3242 10dbac4426872cb7490008d7ef720f5a 1163 SUPERFAMILY SSF52540 5 881 1.89E-104 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3242 10dbac4426872cb7490008d7ef720f5a 1163 Pfam PF12705 PD-(D/E)XK nuclease superfamily 989 1124 6.7E-8 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TMO_3242 10dbac4426872cb7490008d7ef720f5a 1163 Gene3D G3DSA:3.90.320.10 1064 1139 2.4E-7 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal TMO_1490 71482b455b52dba1d59470b83af34062 126 SUPERFAMILY SSF55021 2 58 2.75E-16 T 14-10-2018 TMO_1490 71482b455b52dba1d59470b83af34062 126 Pfam PF13840 ACT domain 58 119 1.9E-17 T 14-10-2018 IPR027795 CASTOR, ACT domain TMO_1490 71482b455b52dba1d59470b83af34062 126 PIRSF PIRSF008459 2 126 4.4E-27 T 14-10-2018 IPR016540 Uncharacterised conserved protein UCP008459 TMO_1490 71482b455b52dba1d59470b83af34062 126 SUPERFAMILY SSF55021 62 125 6.3E-17 T 14-10-2018 TMO_1490 71482b455b52dba1d59470b83af34062 126 Gene3D G3DSA:3.30.2130.10 2 126 6.0E-45 T 14-10-2018 TMO_3136 97c49a08b1471951ef8dafedf8453b3d 132 Gene3D G3DSA:3.30.2020.30 13 112 8.6E-29 T 14-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 TMO_3136 97c49a08b1471951ef8dafedf8453b3d 132 Pfam PF06155 Protein of unknown function (DUF971) 23 106 6.1E-28 T 14-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 TMO_0491 97a0a96ded15869a26342a6c300464f2 172 Gene3D G3DSA:3.90.1340.10 2 58 2.6E-16 T 14-10-2018 IPR037053 Phage tail collar domain superfamily TMO_0491 97a0a96ded15869a26342a6c300464f2 172 SUPERFAMILY SSF88874 1 166 5.62E-37 T 14-10-2018 TMO_0491 97a0a96ded15869a26342a6c300464f2 172 Pfam PF07484 Phage Tail Collar Domain 6 62 4.7E-25 T 14-10-2018 IPR011083 Phage tail collar domain TMO_0538 a2c2bf1dbc9535f341ae898270210591 418 Gene3D G3DSA:3.40.47.10 2 413 3.2E-99 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0538 a2c2bf1dbc9535f341ae898270210591 418 PIRSF PIRSF000429 1 406 2.2E-49 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_0538 a2c2bf1dbc9535f341ae898270210591 418 SUPERFAMILY SSF53901 1 252 4.71E-28 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0538 a2c2bf1dbc9535f341ae898270210591 418 Pfam PF02803 Thiolase, C-terminal domain 288 393 3.3E-12 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 TMO_0538 a2c2bf1dbc9535f341ae898270210591 418 ProSitePatterns PS00737 Thiolases signature 2. 350 366 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 TMO_0538 a2c2bf1dbc9535f341ae898270210591 418 Pfam PF00108 Thiolase, N-terminal domain 4 121 6.3E-9 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_0538 a2c2bf1dbc9535f341ae898270210591 418 SUPERFAMILY SSF53901 266 401 5.9E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1752 eb44e46bf2ab275751a749c05c568f19 505 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 28 493 3.7E-164 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_1752 eb44e46bf2ab275751a749c05c568f19 505 Gene3D G3DSA:3.60.120.10 1 500 1.3E-173 T 14-10-2018 IPR005801 ADC synthase GO:0009058 TMO_1752 eb44e46bf2ab275751a749c05c568f19 505 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 175 3.2E-30 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_1752 eb44e46bf2ab275751a749c05c568f19 505 PRINTS PR00095 Anthranilate synthase component I signature 442 456 8.9E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_1752 eb44e46bf2ab275751a749c05c568f19 505 PRINTS PR00095 Anthranilate synthase component I signature 333 346 8.9E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_1752 eb44e46bf2ab275751a749c05c568f19 505 PRINTS PR00095 Anthranilate synthase component I signature 427 441 8.9E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_1752 eb44e46bf2ab275751a749c05c568f19 505 PRINTS PR00095 Anthranilate synthase component I signature 347 360 8.9E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_1752 eb44e46bf2ab275751a749c05c568f19 505 Pfam PF00425 chorismate binding enzyme 232 485 7.7E-96 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal TMO_1752 eb44e46bf2ab275751a749c05c568f19 505 SUPERFAMILY SSF56322 19 494 4.84E-150 T 14-10-2018 IPR005801 ADC synthase GO:0009058 TMO_b0393 63360353cac4088db5ca5694d1bb92cb 172 Gene3D G3DSA:3.40.630.30 16 166 5.9E-23 T 14-10-2018 TMO_b0393 63360353cac4088db5ca5694d1bb92cb 172 SUPERFAMILY SSF55729 16 149 1.24E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_b0393 63360353cac4088db5ca5694d1bb92cb 172 Pfam PF00583 Acetyltransferase (GNAT) family 54 142 3.8E-9 T 14-10-2018 IPR000182 GNAT domain TMO_a0058 c30a73a2d4891ca6d224477a7d6457bf 374 SUPERFAMILY SSF46689 291 340 3.36E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0058 c30a73a2d4891ca6d224477a7d6457bf 374 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 322 338 1.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_a0058 c30a73a2d4891ca6d224477a7d6457bf 374 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 322 1.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_a0058 c30a73a2d4891ca6d224477a7d6457bf 374 Pfam PF14525 AraC-binding-like domain 52 202 1.8E-20 T 14-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like TMO_a0058 c30a73a2d4891ca6d224477a7d6457bf 374 Pfam PF12833 Helix-turn-helix domain 260 339 3.3E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0058 c30a73a2d4891ca6d224477a7d6457bf 374 Gene3D G3DSA:1.10.10.60 238 340 6.5E-20 T 14-10-2018 TMO_a0058 c30a73a2d4891ca6d224477a7d6457bf 374 SMART SM00342 254 338 1.9E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_1293 aaf1682f4da1ffaebf2b832a73aab891 588 SUPERFAMILY SSF51905 19 425 7.25E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1293 aaf1682f4da1ffaebf2b832a73aab891 588 Gene3D G3DSA:1.10.8.870 450 582 2.5E-16 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_1293 aaf1682f4da1ffaebf2b832a73aab891 588 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 361 367 8.5E-16 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_1293 aaf1682f4da1ffaebf2b832a73aab891 588 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 93 105 8.5E-16 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_1293 aaf1682f4da1ffaebf2b832a73aab891 588 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 397 409 8.5E-16 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_1293 aaf1682f4da1ffaebf2b832a73aab891 588 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 31 8.5E-16 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_1293 aaf1682f4da1ffaebf2b832a73aab891 588 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 48 60 8.5E-16 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_1293 aaf1682f4da1ffaebf2b832a73aab891 588 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 430 554 3.6E-19 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 TMO_1293 aaf1682f4da1ffaebf2b832a73aab891 588 Gene3D G3DSA:3.50.50.60 20 415 3.5E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1293 aaf1682f4da1ffaebf2b832a73aab891 588 Pfam PF01266 FAD dependent oxidoreductase 20 370 6.2E-41 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_1293 aaf1682f4da1ffaebf2b832a73aab891 588 Gene3D G3DSA:3.30.9.10 97 368 3.5E-93 T 14-10-2018 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 473 489 1.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 359 372 0.51 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 491 507 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 455 471 0.044 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 509 525 0.031 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 SUPERFAMILY SSF53474 92 212 2.97E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR00313 NodO calcium binding signature 479 490 4.4E-9 T 14-10-2018 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR00313 NodO calcium binding signature 491 499 4.4E-9 T 14-10-2018 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR00313 NodO calcium binding signature 509 517 4.4E-9 T 14-10-2018 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR00313 NodO calcium binding signature 518 527 4.4E-9 T 14-10-2018 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 Gene3D G3DSA:2.150.10.10 283 417 2.4E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 SUPERFAMILY SSF51120 446 584 1.31E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 SUPERFAMILY SSF51120 326 403 2.09E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 469 487 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 Gene3D G3DSA:3.40.50.1820 1 281 5.8E-77 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 478 496 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 77 98 1.4E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 482 503 1.4E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 Gene3D G3DSA:2.150.10.10 486 600 3.8E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_1347 ecc674f17c0760c20508ddd32ffb1b3b 601 Gene3D G3DSA:2.150.10.10 445 485 5.9E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_c0446 6bce9426c83609b4cbb967932af96789 548 Gene3D G3DSA:3.20.20.140 61 501 2.9E-102 T 14-10-2018 TMO_c0446 6bce9426c83609b4cbb967932af96789 548 Gene3D G3DSA:3.10.310.70 80 210 2.9E-102 T 14-10-2018 TMO_c0446 6bce9426c83609b4cbb967932af96789 548 Gene3D G3DSA:2.30.40.10 12 518 2.9E-102 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_c0446 6bce9426c83609b4cbb967932af96789 548 SUPERFAMILY SSF51556 60 502 1.46E-27 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_c0446 6bce9426c83609b4cbb967932af96789 548 SUPERFAMILY SSF51338 13 542 3.6E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_c0446 6bce9426c83609b4cbb967932af96789 548 Pfam PF07969 Amidohydrolase family 55 538 1.7E-68 T 14-10-2018 IPR013108 Amidohydrolase 3 TMO_c0657 5909145a03f237ea0a336849b8e2e2fa 288 Pfam PF09339 IclR helix-turn-helix domain 46 97 9.3E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_c0657 5909145a03f237ea0a336849b8e2e2fa 288 SMART SM00346 44 134 2.2E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_c0657 5909145a03f237ea0a336849b8e2e2fa 288 SUPERFAMILY SSF55781 110 285 2.35E-25 T 14-10-2018 TMO_c0657 5909145a03f237ea0a336849b8e2e2fa 288 Pfam PF01614 Bacterial transcriptional regulator 166 257 3.2E-6 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_c0657 5909145a03f237ea0a336849b8e2e2fa 288 Gene3D G3DSA:3.30.450.40 115 288 3.0E-23 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_c0657 5909145a03f237ea0a336849b8e2e2fa 288 SUPERFAMILY SSF46785 44 117 9.54E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0657 5909145a03f237ea0a336849b8e2e2fa 288 Gene3D G3DSA:1.10.10.10 36 112 6.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2566 3235c10738cb64b2573c50b438c1677a 453 SUPERFAMILY SSF56935 40 453 1.04E-86 T 14-10-2018 TMO_2566 3235c10738cb64b2573c50b438c1677a 453 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 31 453 6.9E-102 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) TMO_2566 3235c10738cb64b2573c50b438c1677a 453 Gene3D G3DSA:2.40.160.60 40 453 9.3E-134 T 14-10-2018 TMO_1402 90388284d36676d5585c89b1c2fdecb7 511 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_1402 90388284d36676d5585c89b1c2fdecb7 511 Pfam PF00501 AMP-binding enzyme 14 406 1.8E-99 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_1402 90388284d36676d5585c89b1c2fdecb7 511 SUPERFAMILY SSF56801 3 504 3.14E-146 T 14-10-2018 TMO_1402 90388284d36676d5585c89b1c2fdecb7 511 Gene3D G3DSA:3.30.300.310 402 507 1.8E-26 T 14-10-2018 TMO_1402 90388284d36676d5585c89b1c2fdecb7 511 Pfam PF13193 AMP-binding enzyme C-terminal domain 415 491 7.1E-13 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_1402 90388284d36676d5585c89b1c2fdecb7 511 Gene3D G3DSA:3.40.50.12780 7 399 2.9E-131 T 14-10-2018 TMO_c0536 72f08d4fd141da9364d2b6fe460ee46e 352 SUPERFAMILY SSF51182 240 338 4.3E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0536 72f08d4fd141da9364d2b6fe460ee46e 352 Gene3D G3DSA:2.60.120.10 233 337 1.2E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_c0536 72f08d4fd141da9364d2b6fe460ee46e 352 SUPERFAMILY SSF51569 103 206 2.56E-6 T 14-10-2018 TMO_c0536 72f08d4fd141da9364d2b6fe460ee46e 352 Pfam PF07883 Cupin domain 270 327 7.8E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_1196 230517f2b475c2c645006a1738f36c5a 239 SUPERFAMILY SSF48008 90 218 7.06E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_1196 230517f2b475c2c645006a1738f36c5a 239 Gene3D G3DSA:1.20.120.530 82 222 5.9E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_1196 230517f2b475c2c645006a1738f36c5a 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 1.7E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1196 230517f2b475c2c645006a1738f36c5a 239 SMART SM00345 24 82 1.2E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1196 230517f2b475c2c645006a1738f36c5a 239 SMART SM00895 92 216 1.5E-18 T 14-10-2018 IPR011711 GntR, C-terminal TMO_1196 230517f2b475c2c645006a1738f36c5a 239 Pfam PF07729 FCD domain 92 214 1.5E-24 T 14-10-2018 IPR011711 GntR, C-terminal TMO_1196 230517f2b475c2c645006a1738f36c5a 239 SUPERFAMILY SSF46785 18 109 2.61E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1196 230517f2b475c2c645006a1738f36c5a 239 Gene3D G3DSA:1.10.10.10 8 81 8.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1796 a2611a354b10d56edb89adf5db8dafdb 319 Pfam PF03466 LysR substrate binding domain 88 305 1.0E-35 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1796 a2611a354b10d56edb89adf5db8dafdb 319 Gene3D G3DSA:1.10.10.10 2 89 3.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1796 a2611a354b10d56edb89adf5db8dafdb 319 SUPERFAMILY SSF46785 3 86 9.58E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1796 a2611a354b10d56edb89adf5db8dafdb 319 SUPERFAMILY SSF53850 89 306 2.17E-37 T 14-10-2018 TMO_1796 a2611a354b10d56edb89adf5db8dafdb 319 Gene3D G3DSA:3.40.190.290 92 304 2.9E-54 T 14-10-2018 TMO_1796 a2611a354b10d56edb89adf5db8dafdb 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2787 aa1daf5f019aa05e2bb78d875c81d410 521 Gene3D G3DSA:3.90.1150.10 365 497 2.1E-36 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_2787 aa1daf5f019aa05e2bb78d875c81d410 521 Pfam PF00266 Aminotransferase class-V 187 304 1.5E-8 T 14-10-2018 IPR000192 Aminotransferase class V domain TMO_2787 aa1daf5f019aa05e2bb78d875c81d410 521 SUPERFAMILY SSF53383 65 511 4.48E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_2787 aa1daf5f019aa05e2bb78d875c81d410 521 Gene3D G3DSA:3.40.640.10 111 340 5.1E-51 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_a0511 209378f11fef216e72db0348006fe90f 370 SUPERFAMILY SSF47203 223 365 1.06E-27 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_a0511 209378f11fef216e72db0348006fe90f 370 Gene3D G3DSA:2.40.110.10 129 221 1.0E-8 T 14-10-2018 TMO_a0511 209378f11fef216e72db0348006fe90f 370 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 224 357 3.9E-20 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_a0511 209378f11fef216e72db0348006fe90f 370 SUPERFAMILY SSF56645 4 214 1.83E-20 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_a0511 209378f11fef216e72db0348006fe90f 370 Gene3D G3DSA:1.10.540.10 5 117 3.9E-7 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_a0511 209378f11fef216e72db0348006fe90f 370 Gene3D G3DSA:1.20.140.10 222 369 5.8E-26 T 14-10-2018 TMO_1779 f3f45fa813ceb9df966ed64afcf43a3c 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 25.993 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TMO_1779 f3f45fa813ceb9df966ed64afcf43a3c 186 Gene3D G3DSA:1.10.132.20 13 183 1.9E-66 T 14-10-2018 TMO_1779 f3f45fa813ceb9df966ed64afcf43a3c 186 SUPERFAMILY SSF55194 4 185 8.77E-68 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 TMO_1779 f3f45fa813ceb9df966ed64afcf43a3c 186 Pfam PF01765 Ribosome recycling factor 21 184 2.5E-59 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 TMO_1779 f3f45fa813ceb9df966ed64afcf43a3c 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 12 186 2.0E-62 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TMO_1779 f3f45fa813ceb9df966ed64afcf43a3c 186 Gene3D G3DSA:3.30.1360.40 32 106 1.9E-66 T 14-10-2018 TMO_b0333 9874b06f600d8635a92ab816b55451d4 299 Pfam PF01497 Periplasmic binding protein 38 272 1.7E-20 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain TMO_b0333 9874b06f600d8635a92ab816b55451d4 299 Gene3D G3DSA:3.40.50.1980 124 297 2.2E-53 T 14-10-2018 TMO_b0333 9874b06f600d8635a92ab816b55451d4 299 SUPERFAMILY SSF53807 35 293 1.77E-49 T 14-10-2018 TMO_b0333 9874b06f600d8635a92ab816b55451d4 299 Gene3D G3DSA:3.40.50.1980 33 121 1.7E-23 T 14-10-2018 TMO_b0333 9874b06f600d8635a92ab816b55451d4 299 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 6.8E-18 T 14-10-2018 TMO_b0333 9874b06f600d8635a92ab816b55451d4 299 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 86 101 6.8E-18 T 14-10-2018 TMO_b0333 9874b06f600d8635a92ab816b55451d4 299 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 209 227 6.8E-18 T 14-10-2018 TMO_b0333 9874b06f600d8635a92ab816b55451d4 299 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 185 200 6.8E-18 T 14-10-2018 TMO_2587 e61a67222d59188f7e703ed5b2cc63b6 315 Pfam PF04773 FecR protein 111 201 8.0E-20 T 14-10-2018 IPR006860 FecR protein TMO_2587 e61a67222d59188f7e703ed5b2cc63b6 315 Gene3D G3DSA:2.60.120.1440 102 237 1.4E-22 T 14-10-2018 TMO_2587 e61a67222d59188f7e703ed5b2cc63b6 315 Pfam PF16220 Domain of unknown function (DUF4880) 10 49 3.3E-13 T 14-10-2018 IPR032623 FecR, N-terminal TMO_2587 e61a67222d59188f7e703ed5b2cc63b6 315 PIRSF PIRSF018266 3 314 6.9E-73 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_3332 732139262391f37b09c036341538680d 221 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 39 216 1.2E-63 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TMO_3332 732139262391f37b09c036341538680d 221 Pfam PF01227 GTP cyclohydrolase I 38 215 1.3E-74 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TMO_3332 732139262391f37b09c036341538680d 221 Gene3D G3DSA:3.30.1130.10 85 217 2.4E-55 T 14-10-2018 TMO_3332 732139262391f37b09c036341538680d 221 SUPERFAMILY SSF55620 27 216 4.52E-75 T 14-10-2018 TMO_3332 732139262391f37b09c036341538680d 221 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 33 216 39.232 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TMO_3332 732139262391f37b09c036341538680d 221 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 95 111 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TMO_3332 732139262391f37b09c036341538680d 221 Gene3D G3DSA:1.10.286.10 24 81 2.0E-18 T 14-10-2018 TMO_3332 732139262391f37b09c036341538680d 221 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 143 153 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TMO_a0567 b243f63fce51d87dcee42d569131acae 390 SUPERFAMILY SSF55031 185 298 8.67E-27 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TMO_a0567 b243f63fce51d87dcee42d569131acae 390 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 372 1.8E-97 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 TMO_a0567 b243f63fce51d87dcee42d569131acae 390 PIRSF PIRSF005962 1 389 2.4E-113 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 TMO_a0567 b243f63fce51d87dcee42d569131acae 390 Gene3D G3DSA:3.40.630.10 16 370 5.4E-123 T 14-10-2018 TMO_a0567 b243f63fce51d87dcee42d569131acae 390 SUPERFAMILY SSF53187 2 386 2.74E-81 T 14-10-2018 TMO_a0567 b243f63fce51d87dcee42d569131acae 390 Pfam PF07687 Peptidase dimerisation domain 187 279 5.0E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain TMO_a0567 b243f63fce51d87dcee42d569131acae 390 Pfam PF01546 Peptidase family M20/M25/M40 72 384 4.7E-35 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 TMO_a0567 b243f63fce51d87dcee42d569131acae 390 Gene3D G3DSA:3.30.70.360 183 297 5.4E-123 T 14-10-2018 TMO_c0623 5bdc2577748eb3c99bb22a153b8ee2a6 220 Gene3D G3DSA:1.20.120.80 34 219 3.2E-55 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0623 5bdc2577748eb3c99bb22a153b8ee2a6 220 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 41 219 6.4E-80 T 14-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 TMO_c0623 5bdc2577748eb3c99bb22a153b8ee2a6 220 Pfam PF00510 Cytochrome c oxidase subunit III 31 217 5.7E-15 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0623 5bdc2577748eb3c99bb22a153b8ee2a6 220 SUPERFAMILY SSF81452 26 217 8.63E-59 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0868 00bf9eb6fe23d41c4e07c27e7cfe3145 374 Gene3D G3DSA:3.40.50.1820 85 373 8.3E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0868 00bf9eb6fe23d41c4e07c27e7cfe3145 374 PRINTS PR00111 Alpha/beta hydrolase fold signature 310 324 7.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0868 00bf9eb6fe23d41c4e07c27e7cfe3145 374 PRINTS PR00111 Alpha/beta hydrolase fold signature 192 205 7.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0868 00bf9eb6fe23d41c4e07c27e7cfe3145 374 PRINTS PR00111 Alpha/beta hydrolase fold signature 144 159 7.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0868 00bf9eb6fe23d41c4e07c27e7cfe3145 374 SUPERFAMILY SSF53474 85 370 1.1E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0868 00bf9eb6fe23d41c4e07c27e7cfe3145 374 Pfam PF12146 Serine aminopeptidase, S33 116 356 1.3E-52 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 TMO_3226 8ab562922402db4c5ad0f5be82b7f9e6 440 SUPERFAMILY SSF53850 43 428 8.45E-66 T 14-10-2018 TMO_3226 8ab562922402db4c5ad0f5be82b7f9e6 440 Gene3D G3DSA:3.40.190.10 149 425 2.6E-114 T 14-10-2018 TMO_3226 8ab562922402db4c5ad0f5be82b7f9e6 440 Pfam PF13416 Bacterial extracellular solute-binding protein 50 360 1.4E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_3226 8ab562922402db4c5ad0f5be82b7f9e6 440 Gene3D G3DSA:3.40.190.10 33 385 2.6E-114 T 14-10-2018 TMO_a0493 e8d68746d8925ed74c6a0d74bec9f535 305 SUPERFAMILY SSF51621 4 244 6.28E-55 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_a0493 e8d68746d8925ed74c6a0d74bec9f535 305 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 5 232 1.0E-36 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_a0493 e8d68746d8925ed74c6a0d74bec9f535 305 Gene3D G3DSA:3.20.20.60 2 300 3.7E-86 T 14-10-2018 TMO_a0493 e8d68746d8925ed74c6a0d74bec9f535 305 PIRSF PIRSF015582 1 298 1.8E-73 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like TMO_1150 5c4fa36d389c3beeb27e30fc0f059f2a 291 SUPERFAMILY SSF160467 4 96 1.83E-18 T 14-10-2018 TMO_1150 5c4fa36d389c3beeb27e30fc0f059f2a 291 SMART SM00796 3 224 1.1E-69 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D TMO_1150 5c4fa36d389c3beeb27e30fc0f059f2a 291 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 4 219 1.4E-51 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D TMO_1150 5c4fa36d389c3beeb27e30fc0f059f2a 291 SUPERFAMILY SSF50891 91 247 1.48E-27 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily TMO_1150 5c4fa36d389c3beeb27e30fc0f059f2a 291 Gene3D G3DSA:3.30.1360.40 1 81 3.6E-15 T 14-10-2018 TMO_1150 5c4fa36d389c3beeb27e30fc0f059f2a 291 Gene3D G3DSA:2.40.100.10 85 289 3.0E-54 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily TMO_0358 2cbc8ac62a346958485e6f520e2ef11b 286 Pfam PF00156 Phosphoribosyl transferase domain 163 258 8.1E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TMO_0358 2cbc8ac62a346958485e6f520e2ef11b 286 Gene3D G3DSA:3.40.50.2020 124 283 6.9E-16 T 14-10-2018 TMO_0358 2cbc8ac62a346958485e6f520e2ef11b 286 SUPERFAMILY SSF53271 79 265 1.97E-31 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like TMO_b0574 7be4239ee917164f75f9e877932d483d 194 Gene3D G3DSA:3.90.45.10 1 193 9.0E-48 T 14-10-2018 IPR036821 Peptide deformylase superfamily TMO_b0574 7be4239ee917164f75f9e877932d483d 194 SUPERFAMILY SSF56420 3 190 1.14E-48 T 14-10-2018 IPR036821 Peptide deformylase superfamily TMO_b0574 7be4239ee917164f75f9e877932d483d 194 PRINTS PR01576 Peptide deformylase signature 33 62 1.5E-25 T 14-10-2018 IPR023635 Peptide deformylase TMO_b0574 7be4239ee917164f75f9e877932d483d 194 PRINTS PR01576 Peptide deformylase signature 127 145 1.5E-25 T 14-10-2018 IPR023635 Peptide deformylase TMO_b0574 7be4239ee917164f75f9e877932d483d 194 PRINTS PR01576 Peptide deformylase signature 146 175 1.5E-25 T 14-10-2018 IPR023635 Peptide deformylase TMO_b0574 7be4239ee917164f75f9e877932d483d 194 PRINTS PR01576 Peptide deformylase signature 115 126 1.5E-25 T 14-10-2018 IPR023635 Peptide deformylase TMO_b0574 7be4239ee917164f75f9e877932d483d 194 Pfam PF01327 Polypeptide deformylase 4 178 6.1E-41 T 14-10-2018 IPR023635 Peptide deformylase TMO_b0574 7be4239ee917164f75f9e877932d483d 194 PIRSF PIRSF004749 1 194 2.8E-47 T 14-10-2018 IPR023635 Peptide deformylase TMO_b0574 7be4239ee917164f75f9e877932d483d 194 Hamap MF_00163 Peptide deformylase [def]. 2 188 24.665 T 14-10-2018 IPR023635 Peptide deformylase TMO_c0168 bed31adbbfd5ee0fbc528f843eae7db8 362 SUPERFAMILY SSF69572 199 331 8.44E-8 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 TMO_c0168 bed31adbbfd5ee0fbc528f843eae7db8 362 Gene3D G3DSA:3.40.50.720 150 330 1.5E-30 T 14-10-2018 TMO_c0168 bed31adbbfd5ee0fbc528f843eae7db8 362 TIGRFAM TIGR03882 cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain 213 339 1.1E-14 T 14-10-2018 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain TMO_0360 3f051a9c9be8c9c73361f749b3991481 276 Gene3D G3DSA:3.60.110.10 2 273 7.3E-92 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_0360 3f051a9c9be8c9c73361f749b3991481 276 Pfam PF00795 Carbon-nitrogen hydrolase 4 261 2.9E-56 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TMO_0360 3f051a9c9be8c9c73361f749b3991481 276 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 154 174 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site TMO_0360 3f051a9c9be8c9c73361f749b3991481 276 SUPERFAMILY SSF56317 4 270 1.44E-79 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_1029 0290d986c6dc454cc0c230602452c126 381 Gene3D G3DSA:3.30.9.10 83 311 2.6E-97 T 14-10-2018 TMO_1029 0290d986c6dc454cc0c230602452c126 381 SUPERFAMILY SSF51905 3 367 5.18E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1029 0290d986c6dc454cc0c230602452c126 381 Gene3D G3DSA:3.50.50.60 4 350 2.6E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1029 0290d986c6dc454cc0c230602452c126 381 Pfam PF01266 FAD dependent oxidoreductase 4 350 7.0E-45 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_a0537 f4aae6046d147a5206e1df4405feb06e 430 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 19 426 3.8E-104 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_a0537 f4aae6046d147a5206e1df4405feb06e 430 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 420 5.0E-84 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_a0537 f4aae6046d147a5206e1df4405feb06e 430 PIRSF PIRSF006066 3 430 1.4E-88 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0857 d6e8d88d5b2fd79bd09ab5e38a8a0d57 273 Gene3D G3DSA:3.40.50.1820 20 268 6.2E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0857 d6e8d88d5b2fd79bd09ab5e38a8a0d57 273 Pfam PF12697 Alpha/beta hydrolase family 36 259 2.8E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0857 d6e8d88d5b2fd79bd09ab5e38a8a0d57 273 SUPERFAMILY SSF53474 16 263 4.95E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2118 f1a1bb5871670f3bec13a5b7cb50be65 384 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 370 6.0E-70 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 TMO_2118 f1a1bb5871670f3bec13a5b7cb50be65 384 Gene3D G3DSA:1.20.1720.10 1 375 3.7E-89 T 14-10-2018 TMO_2118 f1a1bb5871670f3bec13a5b7cb50be65 384 SUPERFAMILY SSF103473 5 371 2.49E-55 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2118 f1a1bb5871670f3bec13a5b7cb50be65 384 Pfam PF07690 Major Facilitator Superfamily 4 343 1.9E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_3183 bedf3cdf62d4a0cec24062d4755ba87d 418 Gene3D G3DSA:3.40.50.1820 323 418 4.1E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3183 bedf3cdf62d4a0cec24062d4755ba87d 418 Gene3D G3DSA:3.40.50.1820 45 269 4.6E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3183 bedf3cdf62d4a0cec24062d4755ba87d 418 PIRSF PIRSF029171 3 415 2.4E-124 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 TMO_3183 bedf3cdf62d4a0cec24062d4755ba87d 418 SUPERFAMILY SSF53474 97 393 6.05E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3183 bedf3cdf62d4a0cec24062d4755ba87d 418 Pfam PF03583 Secretory lipase 145 329 4.2E-19 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 TMO_0521 fea3f7b1471d75bb11501e088e003b25 223 Gene3D G3DSA:1.10.10.60 4 69 5.1E-16 T 14-10-2018 TMO_0521 fea3f7b1471d75bb11501e088e003b25 223 SUPERFAMILY SSF46689 19 97 5.64E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0521 fea3f7b1471d75bb11501e088e003b25 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 1.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0521 fea3f7b1471d75bb11501e088e003b25 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 1.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0521 fea3f7b1471d75bb11501e088e003b25 223 SUPERFAMILY SSF48498 94 218 9.39E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_0521 fea3f7b1471d75bb11501e088e003b25 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 5.7E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0521 fea3f7b1471d75bb11501e088e003b25 223 Gene3D G3DSA:1.10.357.10 70 218 5.5E-29 T 14-10-2018 TMO_1927 197889641c370dd34482a0dd3c0b739d 577 Pfam PF00817 impB/mucB/samB family 50 175 9.1E-8 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TMO_1927 197889641c370dd34482a0dd3c0b739d 577 SUPERFAMILY SSF56672 48 275 1.89E-22 T 14-10-2018 TMO_b0086 367ebc2d1a67925ef0cd3638d1fbb6d9 234 SMART SM00345 21 79 1.3E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0086 367ebc2d1a67925ef0cd3638d1fbb6d9 234 SUPERFAMILY SSF48008 100 222 4.18E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0086 367ebc2d1a67925ef0cd3638d1fbb6d9 234 SUPERFAMILY SSF46785 15 83 3.24E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0086 367ebc2d1a67925ef0cd3638d1fbb6d9 234 Gene3D G3DSA:1.10.10.10 16 80 2.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0086 367ebc2d1a67925ef0cd3638d1fbb6d9 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 4.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0086 367ebc2d1a67925ef0cd3638d1fbb6d9 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 4.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0086 367ebc2d1a67925ef0cd3638d1fbb6d9 234 Gene3D G3DSA:1.20.120.530 86 225 1.3E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0086 367ebc2d1a67925ef0cd3638d1fbb6d9 234 Pfam PF07729 FCD domain 91 214 1.7E-18 T 14-10-2018 IPR011711 GntR, C-terminal TMO_b0086 367ebc2d1a67925ef0cd3638d1fbb6d9 234 SMART SM00895 89 215 8.8E-12 T 14-10-2018 IPR011711 GntR, C-terminal TMO_b0086 367ebc2d1a67925ef0cd3638d1fbb6d9 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 79 8.6E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1218 1b66b62edf739db7e4b8cb3fea263338 276 Hamap MF_00361 NAD kinase [nadK]. 7 276 19.535 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TMO_1218 1b66b62edf739db7e4b8cb3fea263338 276 Pfam PF01513 ATP-NAD kinase 45 202 5.6E-17 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TMO_1218 1b66b62edf739db7e4b8cb3fea263338 276 SUPERFAMILY SSF111331 47 261 5.1E-52 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily TMO_1218 1b66b62edf739db7e4b8cb3fea263338 276 Gene3D G3DSA:3.40.50.10330 54 117 2.0E-34 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 TMO_1218 1b66b62edf739db7e4b8cb3fea263338 276 Gene3D G3DSA:2.60.200.30 118 248 2.0E-34 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TMO_3141 ff51ab4dbed2bd9366a67d4f13d49dc6 805 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 24 180 1.8E-27 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region TMO_3141 ff51ab4dbed2bd9366a67d4f13d49dc6 805 SUPERFAMILY SSF52540 389 699 2.02E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3141 ff51ab4dbed2bd9366a67d4f13d49dc6 805 SUPERFAMILY SSF46785 737 801 1.06E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3141 ff51ab4dbed2bd9366a67d4f13d49dc6 805 SMART SM00843 737 802 1.7E-35 T 14-10-2018 IPR018541 FtsK gamma domain TMO_3141 ff51ab4dbed2bd9366a67d4f13d49dc6 805 Pfam PF09397 Ftsk gamma domain 740 799 4.2E-26 T 14-10-2018 IPR018541 FtsK gamma domain TMO_3141 ff51ab4dbed2bd9366a67d4f13d49dc6 805 Pfam PF01580 FtsK/SpoIIIE family 411 630 4.8E-65 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TMO_3141 ff51ab4dbed2bd9366a67d4f13d49dc6 805 Gene3D G3DSA:3.30.980.40 303 407 1.7E-28 T 14-10-2018 TMO_3141 ff51ab4dbed2bd9366a67d4f13d49dc6 805 Gene3D G3DSA:1.10.10.10 733 798 1.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3141 ff51ab4dbed2bd9366a67d4f13d49dc6 805 Gene3D G3DSA:3.40.50.300 408 715 8.5E-115 T 14-10-2018 TMO_a0406 5bda57cc83c1d8337485f46fb4175ab3 163 Gene3D G3DSA:3.30.429.10 1 59 1.4E-11 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily TMO_a0406 5bda57cc83c1d8337485f46fb4175ab3 163 SUPERFAMILY SSF55331 2 57 4.21E-9 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily TMO_a0406 5bda57cc83c1d8337485f46fb4175ab3 163 Pfam PF01361 Tautomerase enzyme 2 57 2.9E-6 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 TMO_0675 17aaac67ecae53f22657ffae24a36447 515 Pfam PF00005 ABC transporter 19 166 1.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0675 17aaac67ecae53f22657ffae24a36447 515 Gene3D G3DSA:3.40.50.300 1 246 6.2E-56 T 14-10-2018 TMO_0675 17aaac67ecae53f22657ffae24a36447 515 SUPERFAMILY SSF52540 252 484 6.43E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0675 17aaac67ecae53f22657ffae24a36447 515 Pfam PF00005 ABC transporter 269 425 3.1E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0675 17aaac67ecae53f22657ffae24a36447 515 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0675 17aaac67ecae53f22657ffae24a36447 515 SUPERFAMILY SSF52540 2 223 1.52E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0675 17aaac67ecae53f22657ffae24a36447 515 SMART SM00382 278 474 2.5 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0675 17aaac67ecae53f22657ffae24a36447 515 SMART SM00382 26 214 6.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0675 17aaac67ecae53f22657ffae24a36447 515 Gene3D G3DSA:3.40.50.300 253 491 1.8E-39 T 14-10-2018 TMO_0675 17aaac67ecae53f22657ffae24a36447 515 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 Pfam PF02503 Polyphosphate kinase middle domain 216 410 2.7E-54 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 Gene3D G3DSA:3.30.1840.10 95 401 1.1E-96 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 Hamap MF_00347 Polyphosphate kinase [ppk]. 99 776 28.02 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 Gene3D G3DSA:3.30.870.10 590 772 1.5E-64 T 14-10-2018 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 101 773 2.2E-287 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 Gene3D G3DSA:3.30.870.10 410 589 3.3E-73 T 14-10-2018 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 SUPERFAMILY SSF56024 410 587 2.54E-56 T 14-10-2018 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 SUPERFAMILY SSF143724 204 402 5.69E-59 T 14-10-2018 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 Pfam PF13090 Polyphosphate kinase C-terminal domain 420 771 1.1E-152 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 Pfam PF13089 Polyphosphate kinase N-terminal domain 102 206 3.8E-36 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 SUPERFAMILY SSF56024 590 771 2.69E-67 T 14-10-2018 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 PIRSF PIRSF015589 81 787 1.7E-265 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TMO_3317 db04ebe3bec195b9ddee29a54ed7c786 795 SUPERFAMILY SSF140356 99 202 3.01E-37 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 TMO_a0569 e960911f8f5c437330505a331498ab34 339 Gene3D G3DSA:3.90.180.10 8 332 3.0E-94 T 14-10-2018 TMO_a0569 e960911f8f5c437330505a331498ab34 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 123 5.1E-11 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_a0569 e960911f8f5c437330505a331498ab34 339 SMART SM00829 10 333 1.8E-31 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_a0569 e960911f8f5c437330505a331498ab34 339 SUPERFAMILY SSF50129 1 156 9.12E-40 T 14-10-2018 IPR011032 GroES-like superfamily TMO_a0569 e960911f8f5c437330505a331498ab34 339 Pfam PF00107 Zinc-binding dehydrogenase 167 298 6.3E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_a0569 e960911f8f5c437330505a331498ab34 339 SUPERFAMILY SSF51735 131 309 3.74E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0569 e960911f8f5c437330505a331498ab34 339 Gene3D G3DSA:3.40.50.720 142 306 3.0E-94 T 14-10-2018 TMO_0514 ee472a988df34cd1e57c4ed9af0224db 394 SUPERFAMILY SSF103473 3 385 5.1E-42 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0514 ee472a988df34cd1e57c4ed9af0224db 394 Pfam PF07690 Major Facilitator Superfamily 20 354 3.3E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0514 ee472a988df34cd1e57c4ed9af0224db 394 Gene3D G3DSA:1.20.1250.20 6 387 2.5E-32 T 14-10-2018 TMO_1243 b03a4b217ac66d1b2331683327d833c2 117 SUPERFAMILY SSF101801 39 115 3.14E-23 T 14-10-2018 IPR036429 SpoA-like superfamily TMO_1243 b03a4b217ac66d1b2331683327d833c2 117 Gene3D G3DSA:2.30.330.10 28 116 1.9E-30 T 14-10-2018 IPR036429 SpoA-like superfamily TMO_1243 b03a4b217ac66d1b2331683327d833c2 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 59 75 1.5E-22 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TMO_1243 b03a4b217ac66d1b2331683327d833c2 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 42 58 1.5E-22 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TMO_1243 b03a4b217ac66d1b2331683327d833c2 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 75 88 1.5E-22 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TMO_1243 b03a4b217ac66d1b2331683327d833c2 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 88 103 1.5E-22 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TMO_1243 b03a4b217ac66d1b2331683327d833c2 117 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 42 112 1.8E-25 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) TMO_1243 b03a4b217ac66d1b2331683327d833c2 117 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 40 114 3.9E-30 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 TMO_3230 1980f5eb0f83d7eee233e084b70fcd8a 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.3E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_3230 1980f5eb0f83d7eee233e084b70fcd8a 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 TMO_3230 1980f5eb0f83d7eee233e084b70fcd8a 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.6E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_3230 1980f5eb0f83d7eee233e084b70fcd8a 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.6E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_3230 1980f5eb0f83d7eee233e084b70fcd8a 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.6E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_3230 1980f5eb0f83d7eee233e084b70fcd8a 93 Gene3D G3DSA:4.10.520.10 1 92 1.1E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TMO_3230 1980f5eb0f83d7eee233e084b70fcd8a 93 SUPERFAMILY SSF47729 1 92 7.51E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TMO_3230 1980f5eb0f83d7eee233e084b70fcd8a 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 28.901 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 TMO_3230 1980f5eb0f83d7eee233e084b70fcd8a 93 SMART SM00411 1 91 8.8E-44 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_3230 1980f5eb0f83d7eee233e084b70fcd8a 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 1.2E-45 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 TMO_2887 0b446b7355347df2667226993498904d 485 Gene3D G3DSA:3.30.830.10 275 459 8.5E-53 T 14-10-2018 TMO_2887 0b446b7355347df2667226993498904d 485 SUPERFAMILY SSF63411 42 270 4.37E-40 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_2887 0b446b7355347df2667226993498904d 485 Gene3D G3DSA:3.30.830.10 53 262 1.0E-35 T 14-10-2018 TMO_2887 0b446b7355347df2667226993498904d 485 Pfam PF05193 Peptidase M16 inactive domain 215 389 6.2E-28 T 14-10-2018 IPR007863 Peptidase M16, C-terminal TMO_2887 0b446b7355347df2667226993498904d 485 SUPERFAMILY SSF63411 276 459 3.17E-49 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_0645 4e3aa3299be62a926cbeded6edbfa400 156 SMART SM00530 64 122 5.9E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_0645 4e3aa3299be62a926cbeded6edbfa400 156 Pfam PF01381 Helix-turn-helix 65 102 9.9E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_0645 4e3aa3299be62a926cbeded6edbfa400 156 Gene3D G3DSA:1.10.260.40 23 119 2.6E-13 T 14-10-2018 TMO_0645 4e3aa3299be62a926cbeded6edbfa400 156 SUPERFAMILY SSF47413 62 102 4.9E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 SUPERFAMILY SSF51735 3 237 4.97E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 6.9E-5 T 14-10-2018 TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 Gene3D G3DSA:3.40.50.720 5 244 9.7E-65 T 14-10-2018 TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 Pfam PF00106 short chain dehydrogenase 8 197 2.1E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0550 c2b197f65d11fca348a81d889b4d587a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0444 aef8adf0c34c7e8bb7caa793301470b2 494 SUPERFAMILY SSF53383 131 489 1.87E-67 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0444 aef8adf0c34c7e8bb7caa793301470b2 494 SMART SM00345 20 79 6.2E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0444 aef8adf0c34c7e8bb7caa793301470b2 494 Gene3D G3DSA:1.10.10.10 3 80 4.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0444 aef8adf0c34c7e8bb7caa793301470b2 494 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 79 4.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0444 aef8adf0c34c7e8bb7caa793301470b2 494 Gene3D G3DSA:3.40.640.10 121 481 2.8E-87 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0444 aef8adf0c34c7e8bb7caa793301470b2 494 SUPERFAMILY SSF46785 9 83 6.68E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0444 aef8adf0c34c7e8bb7caa793301470b2 494 Pfam PF00155 Aminotransferase class I and II 190 481 6.0E-13 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_b0200 2cab955050f9d6102249d1656e47fc22 279 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0200 2cab955050f9d6102249d1656e47fc22 279 Gene3D G3DSA:3.40.50.300 24 247 2.8E-67 T 14-10-2018 TMO_b0200 2cab955050f9d6102249d1656e47fc22 279 Pfam PF00005 ABC transporter 44 183 5.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0200 2cab955050f9d6102249d1656e47fc22 279 SMART SM00382 53 234 1.9E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0200 2cab955050f9d6102249d1656e47fc22 279 SUPERFAMILY SSF52540 23 239 5.69E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0285 7973229089ea0692c75cdb2652bc5985 326 Pfam PF03060 Nitronate monooxygenase 1 297 2.3E-38 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_b0285 7973229089ea0692c75cdb2652bc5985 326 Gene3D G3DSA:3.20.20.70 1 299 1.3E-65 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_b0285 7973229089ea0692c75cdb2652bc5985 326 SUPERFAMILY SSF51412 1 305 7.63E-41 T 14-10-2018 TMO_2880 74f4bf7da4055ee68945a29066131a7f 211 PIRSF PIRSF004553 1 196 7.7E-42 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 TMO_2880 74f4bf7da4055ee68945a29066131a7f 211 SUPERFAMILY SSF53335 3 188 1.13E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_2880 74f4bf7da4055ee68945a29066131a7f 211 Pfam PF03602 Conserved hypothetical protein 95 3 192 4.9E-38 T 14-10-2018 TMO_2880 74f4bf7da4055ee68945a29066131a7f 211 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 130 136 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TMO_2880 74f4bf7da4055ee68945a29066131a7f 211 Gene3D G3DSA:3.40.50.150 1 199 2.7E-50 T 14-10-2018 TMO_0754 75671bb31dec8f6a85a5468e78b448e1 499 PIRSF PIRSF006603 35 476 9.6E-60 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TMO_0754 75671bb31dec8f6a85a5468e78b448e1 499 TIGRFAM TIGR00797 matE: MATE efflux family protein 45 452 6.0E-71 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TMO_0754 75671bb31dec8f6a85a5468e78b448e1 499 Pfam PF01554 MatE 45 204 9.9E-29 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TMO_0754 75671bb31dec8f6a85a5468e78b448e1 499 Pfam PF01554 MatE 273 434 3.3E-23 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TMO_b0412 910f575732329df61977b51c29974155 485 Pfam PF00171 Aldehyde dehydrogenase family 26 477 3.9E-154 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_b0412 910f575732329df61977b51c29974155 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_b0412 910f575732329df61977b51c29974155 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_b0412 910f575732329df61977b51c29974155 485 Gene3D G3DSA:3.40.309.10 256 446 1.6E-164 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_b0412 910f575732329df61977b51c29974155 485 Gene3D G3DSA:3.40.605.10 28 471 1.6E-164 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_b0412 910f575732329df61977b51c29974155 485 SUPERFAMILY SSF53720 10 480 5.37E-149 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_3396 4853c3f28e8ccb3915245722986e0746 160 SUPERFAMILY SSF54611 9 154 1.59E-50 T 14-10-2018 IPR035958 SecB-like superfamily TMO_3396 4853c3f28e8ccb3915245722986e0746 160 Pfam PF02556 Preprotein translocase subunit SecB 16 155 2.0E-55 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_3396 4853c3f28e8ccb3915245722986e0746 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 85 105 7.3E-25 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_3396 4853c3f28e8ccb3915245722986e0746 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 23 40 7.3E-25 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_3396 4853c3f28e8ccb3915245722986e0746 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 135 153 7.3E-25 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_3396 4853c3f28e8ccb3915245722986e0746 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 109 131 7.3E-25 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_3396 4853c3f28e8ccb3915245722986e0746 160 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 16 154 2.1E-43 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_3396 4853c3f28e8ccb3915245722986e0746 160 Gene3D G3DSA:3.10.420.10 5 160 2.2E-57 T 14-10-2018 IPR035958 SecB-like superfamily TMO_3396 4853c3f28e8ccb3915245722986e0746 160 Hamap MF_00821 Protein-export protein SecB [secB]. 1 157 31.01 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_0803 ffa3077f3860f175e80545148be6eb83 249 Gene3D G3DSA:3.40.50.300 1 248 5.2E-59 T 14-10-2018 TMO_0803 ffa3077f3860f175e80545148be6eb83 249 SUPERFAMILY SSF52540 6 244 3.18E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0803 ffa3077f3860f175e80545148be6eb83 249 Pfam PF00005 ABC transporter 24 177 4.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0803 ffa3077f3860f175e80545148be6eb83 249 SMART SM00382 32 234 5.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0166 9b3d90f6dc9935f22b1486bee57be89f 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 278 4.1E-24 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_a0379 439b4a2f0bf2f1466491ae86390062a3 252 Gene3D G3DSA:1.10.10.60 15 78 2.7E-18 T 14-10-2018 TMO_a0379 439b4a2f0bf2f1466491ae86390062a3 252 ProSitePatterns PS01081 TetR-type HTH domain signature. 48 79 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_a0379 439b4a2f0bf2f1466491ae86390062a3 252 SUPERFAMILY SSF48498 104 214 1.19E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_a0379 439b4a2f0bf2f1466491ae86390062a3 252 Gene3D G3DSA:1.10.357.10 79 216 8.9E-29 T 14-10-2018 TMO_a0379 439b4a2f0bf2f1466491ae86390062a3 252 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 57 80 1.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0379 439b4a2f0bf2f1466491ae86390062a3 252 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 49 1.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0379 439b4a2f0bf2f1466491ae86390062a3 252 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 82 2.0E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0379 439b4a2f0bf2f1466491ae86390062a3 252 SUPERFAMILY SSF46689 24 89 2.62E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0182 fdd03889593ad5f6820318b7d83165b3 397 Gene3D G3DSA:1.20.1250.20 4 197 1.6E-30 T 14-10-2018 TMO_b0182 fdd03889593ad5f6820318b7d83165b3 397 Gene3D G3DSA:1.20.1250.20 198 382 3.2E-14 T 14-10-2018 TMO_b0182 fdd03889593ad5f6820318b7d83165b3 397 SUPERFAMILY SSF103473 4 380 1.83E-56 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_b0182 fdd03889593ad5f6820318b7d83165b3 397 Pfam PF07690 Major Facilitator Superfamily 10 318 1.4E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0270 33d5d228bd4cb7706ff1db881e3a4c19 123 Gene3D G3DSA:1.10.760.10 13 120 1.3E-38 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0270 33d5d228bd4cb7706ff1db881e3a4c19 123 SUPERFAMILY SSF46626 23 122 1.78E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0270 33d5d228bd4cb7706ff1db881e3a4c19 123 Pfam PF00034 Cytochrome c 26 121 3.4E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0270 33d5d228bd4cb7706ff1db881e3a4c19 123 PRINTS PR00604 Class IA and IB cytochrome C signature 76 92 9.3E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0270 33d5d228bd4cb7706ff1db881e3a4c19 123 PRINTS PR00604 Class IA and IB cytochrome C signature 34 41 9.3E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0270 33d5d228bd4cb7706ff1db881e3a4c19 123 PRINTS PR00604 Class IA and IB cytochrome C signature 62 72 9.3E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0270 33d5d228bd4cb7706ff1db881e3a4c19 123 PRINTS PR00604 Class IA and IB cytochrome C signature 46 61 9.3E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0270 33d5d228bd4cb7706ff1db881e3a4c19 123 PRINTS PR00604 Class IA and IB cytochrome C signature 112 120 9.3E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0270 33d5d228bd4cb7706ff1db881e3a4c19 123 PRINTS PR00604 Class IA and IB cytochrome C signature 95 105 9.3E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_0482 03472dd3ff2ed16dd07fa5506fe2dd6d 183 Gene3D G3DSA:3.40.50.1000 1 172 9.0E-50 T 14-10-2018 IPR023214 HAD superfamily TMO_0482 03472dd3ff2ed16dd07fa5506fe2dd6d 183 SUPERFAMILY SSF56784 5 176 4.13E-44 T 14-10-2018 IPR036412 HAD-like superfamily TMO_0482 03472dd3ff2ed16dd07fa5506fe2dd6d 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 11 149 5.0E-41 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 TMO_0482 03472dd3ff2ed16dd07fa5506fe2dd6d 183 Pfam PF13242 HAD-hyrolase-like 104 171 5.1E-11 T 14-10-2018 TMO_0482 03472dd3ff2ed16dd07fa5506fe2dd6d 183 PIRSF PIRSF004682 1 177 1.4E-52 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 TMO_0482 03472dd3ff2ed16dd07fa5506fe2dd6d 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 9 148 2.8E-31 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 TMO_b0543 76320cb61492a0760e9f5d217e8c672b 183 Gene3D G3DSA:3.30.70.1520 25 103 4.3E-36 T 14-10-2018 TMO_b0543 76320cb61492a0760e9f5d217e8c672b 183 SUPERFAMILY SSF103025 64 174 1.2E-10 T 14-10-2018 TMO_b0543 76320cb61492a0760e9f5d217e8c672b 183 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 31 178 2.0E-43 T 14-10-2018 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 TMO_b0543 76320cb61492a0760e9f5d217e8c672b 183 Pfam PF04268 Sarcosine oxidase, gamma subunit family 35 173 4.3E-22 T 14-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 TMO_b0543 76320cb61492a0760e9f5d217e8c672b 183 Gene3D G3DSA:3.30.1360.120 19 178 4.3E-36 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TMO_1624 aec4f0dbe689d6d00cd32aecc533490e 138 PIRSF PIRSF006092 23 138 1.3E-15 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 TMO_1624 aec4f0dbe689d6d00cd32aecc533490e 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 64 137 1.2E-12 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 TMO_1624 aec4f0dbe689d6d00cd32aecc533490e 138 Pfam PF14760 Rnk N-terminus 18 58 7.0E-11 T 14-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain TMO_1624 aec4f0dbe689d6d00cd32aecc533490e 138 Gene3D G3DSA:3.10.50.30 59 138 3.0E-18 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 TMO_1624 aec4f0dbe689d6d00cd32aecc533490e 138 SUPERFAMILY SSF54534 64 137 6.02E-11 T 14-10-2018 TMO_1456 6a5252e9302820ea13da89063f7f9b8f 167 Pfam PF01161 Phosphatidylethanolamine-binding protein 28 162 2.0E-34 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein TMO_1456 6a5252e9302820ea13da89063f7f9b8f 167 Gene3D G3DSA:3.90.280.10 2 165 9.2E-51 T 14-10-2018 IPR036610 PEBP-like superfamily TMO_1456 6a5252e9302820ea13da89063f7f9b8f 167 SUPERFAMILY SSF49777 15 164 3.53E-43 T 14-10-2018 IPR036610 PEBP-like superfamily TMO_1456 6a5252e9302820ea13da89063f7f9b8f 167 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 34 162 1.2E-33 T 14-10-2018 IPR005247 YbhB/YbcL TMO_3107 7f9a26bb9aec4f74dfc2b199b78c0159 436 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 244 389 5.4E-24 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_3107 7f9a26bb9aec4f74dfc2b199b78c0159 436 SMART SM00044 195 408 1.6E-6 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_3107 7f9a26bb9aec4f74dfc2b199b78c0159 436 Gene3D G3DSA:3.30.70.1230 235 435 4.0E-46 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_3107 7f9a26bb9aec4f74dfc2b199b78c0159 436 SUPERFAMILY SSF55073 240 431 7.22E-42 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_a0264 a08dc303faf64acd9d6600968fdf5467 75 SUPERFAMILY SSF89447 2 57 7.32E-6 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily TMO_a0264 a08dc303faf64acd9d6600968fdf5467 75 SMART SM00966 3 46 2.1E-4 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TMO_b0172 f15f4eef66a639456ff5ca9543ee350c 420 Gene3D G3DSA:3.40.1080.10 13 179 2.8E-15 T 14-10-2018 TMO_b0172 f15f4eef66a639456ff5ca9543ee350c 420 SUPERFAMILY SSF100950 183 414 1.5E-48 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_b0172 f15f4eef66a639456ff5ca9543ee350c 420 Gene3D G3DSA:3.30.750.70 184 276 4.9E-19 T 14-10-2018 TMO_b0172 f15f4eef66a639456ff5ca9543ee350c 420 Gene3D G3DSA:3.40.1080.20 278 419 7.0E-48 T 14-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily TMO_b0172 f15f4eef66a639456ff5ca9543ee350c 420 SUPERFAMILY SSF100950 26 216 5.23E-7 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_b0172 f15f4eef66a639456ff5ca9543ee350c 420 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 260 411 1.3E-45 T 14-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain TMO_b0242 bdec88f189b64b0e10f43ac8d2857d2c 373 Gene3D G3DSA:1.20.140.10 232 369 2.4E-26 T 14-10-2018 TMO_b0242 bdec88f189b64b0e10f43ac8d2857d2c 373 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 103 5.8E-17 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_b0242 bdec88f189b64b0e10f43ac8d2857d2c 373 Gene3D G3DSA:2.40.110.10 125 223 5.0E-21 T 14-10-2018 TMO_b0242 bdec88f189b64b0e10f43ac8d2857d2c 373 Gene3D G3DSA:1.10.540.10 1 115 1.1E-26 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_b0242 bdec88f189b64b0e10f43ac8d2857d2c 373 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 361 5.1E-19 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_b0242 bdec88f189b64b0e10f43ac8d2857d2c 373 SUPERFAMILY SSF47203 228 362 6.6E-28 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_b0242 bdec88f189b64b0e10f43ac8d2857d2c 373 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 205 1.3E-8 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_b0242 bdec88f189b64b0e10f43ac8d2857d2c 373 SUPERFAMILY SSF56645 1 215 6.68E-44 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_1138 a2e97782fce2073f40412465c0c77f96 415 Pfam PF01476 LysM domain 364 411 1.7E-10 T 14-10-2018 IPR018392 LysM domain TMO_1138 a2e97782fce2073f40412465c0c77f96 415 Gene3D G3DSA:3.10.350.10 361 409 1.9E-14 T 14-10-2018 IPR036779 LysM domain superfamily TMO_1138 a2e97782fce2073f40412465c0c77f96 415 SMART SM00257 362 411 2.0E-4 T 14-10-2018 IPR018392 LysM domain TMO_1138 a2e97782fce2073f40412465c0c77f96 415 Gene3D G3DSA:2.60.40.10 130 208 1.8E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold TMO_1138 a2e97782fce2073f40412465c0c77f96 415 SUPERFAMILY SSF54106 361 411 6.41E-6 T 14-10-2018 TMO_d0023 73a11a8f3e799d5b4d774abb314d7e60 497 Gene3D G3DSA:3.30.300.310 399 497 1.2E-34 T 14-10-2018 TMO_d0023 73a11a8f3e799d5b4d774abb314d7e60 497 Gene3D G3DSA:3.40.50.12780 1 396 2.4E-107 T 14-10-2018 TMO_d0023 73a11a8f3e799d5b4d774abb314d7e60 497 SUPERFAMILY SSF56801 2 495 2.88E-147 T 14-10-2018 TMO_d0023 73a11a8f3e799d5b4d774abb314d7e60 497 ProSitePatterns PS00455 Putative AMP-binding domain signature. 154 165 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_d0023 73a11a8f3e799d5b4d774abb314d7e60 497 Pfam PF00501 AMP-binding enzyme 9 403 1.0E-97 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_d0023 73a11a8f3e799d5b4d774abb314d7e60 497 Pfam PF13193 AMP-binding enzyme C-terminal domain 412 487 1.8E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_1565 5bbf9b227d3a3bb3c626fff2b6e354f4 469 SUPERFAMILY SSF51905 5 239 1.25E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1565 5bbf9b227d3a3bb3c626fff2b6e354f4 469 Pfam PF13454 FAD-NAD(P)-binding 9 166 1.6E-34 T 14-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain TMO_b0114 e6d736f52026c276131b592768bb0ec6 106 SUPERFAMILY SSF48076 8 86 8.5E-14 T 14-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily TMO_b0114 e6d736f52026c276131b592768bb0ec6 106 Gene3D G3DSA:1.10.700.10 5 100 1.5E-10 T 14-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily TMO_b0114 e6d736f52026c276131b592768bb0ec6 106 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 8 85 1.6E-11 T 14-10-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit TMO_0401 c69f5080a54a48ef569f63a6430900d3 262 PIRSF PIRSF006648 3 259 1.4E-23 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TMO_0401 c69f5080a54a48ef569f63a6430900d3 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 5.7E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TMO_0401 c69f5080a54a48ef569f63a6430900d3 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 108 133 5.7E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TMO_0401 c69f5080a54a48ef569f63a6430900d3 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 5.7E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TMO_0401 c69f5080a54a48ef569f63a6430900d3 262 Pfam PF01061 ABC-2 type transporter 15 223 1.5E-32 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TMO_0520 0d526533b5293f0210a3501cd39df7bb 325 SUPERFAMILY SSF51735 3 316 6.38E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0520 0d526533b5293f0210a3501cd39df7bb 325 Gene3D G3DSA:3.90.25.10 178 311 2.9E-91 T 14-10-2018 TMO_0520 0d526533b5293f0210a3501cd39df7bb 325 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 205 1.1E-17 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TMO_0520 0d526533b5293f0210a3501cd39df7bb 325 Gene3D G3DSA:3.40.50.720 7 302 2.9E-91 T 14-10-2018 TMO_a0118 4d864e7e708ca0bacf4fd9b89b28b8c4 570 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0118 4d864e7e708ca0bacf4fd9b89b28b8c4 570 Gene3D G3DSA:3.40.50.300 320 568 8.8E-94 T 14-10-2018 TMO_a0118 4d864e7e708ca0bacf4fd9b89b28b8c4 570 Pfam PF00664 ABC transporter transmembrane region 18 286 1.4E-50 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_a0118 4d864e7e708ca0bacf4fd9b89b28b8c4 570 Gene3D G3DSA:1.20.1560.10 1 315 7.4E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_a0118 4d864e7e708ca0bacf4fd9b89b28b8c4 570 SUPERFAMILY SSF52540 323 568 2.88E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0118 4d864e7e708ca0bacf4fd9b89b28b8c4 570 SMART SM00382 357 543 1.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0118 4d864e7e708ca0bacf4fd9b89b28b8c4 570 Pfam PF00005 ABC transporter 348 497 2.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0118 4d864e7e708ca0bacf4fd9b89b28b8c4 570 SUPERFAMILY SSF90123 4 321 2.62E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_3339 ca973b90584200d5d5ff355ebfb27e55 710 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 292 642 6.6E-63 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 TMO_3339 ca973b90584200d5d5ff355ebfb27e55 710 SUPERFAMILY SSF52540 292 683 7.96E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3339 ca973b90584200d5d5ff355ebfb27e55 710 Gene3D G3DSA:3.40.50.300 500 688 1.5E-23 T 14-10-2018 TMO_1134 5549b83a3ee770410ac2eb47f21f67ab 367 SUPERFAMILY SSF52540 4 191 1.27E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1134 5549b83a3ee770410ac2eb47f21f67ab 367 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 189 2.2E-43 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_1134 5549b83a3ee770410ac2eb47f21f67ab 367 SUPERFAMILY SSF90002 277 362 1.31E-5 T 14-10-2018 TMO_1134 5549b83a3ee770410ac2eb47f21f67ab 367 Gene3D G3DSA:3.40.50.300 3 205 3.4E-53 T 14-10-2018 TMO_0617 78781814279d8a5aeab6ceeefe36794b 340 SUPERFAMILY SSF53590 8 330 3.66E-65 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like TMO_0617 78781814279d8a5aeab6ceeefe36794b 340 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 8 307 7.5E-61 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain TMO_0617 78781814279d8a5aeab6ceeefe36794b 340 Gene3D G3DSA:3.90.245.10 2 334 2.7E-74 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like TMO_1439 76ec359605313225cf2c47ad7ae6ff4c 450 Gene3D G3DSA:3.40.50.150 132 433 5.5E-83 T 14-10-2018 TMO_1439 76ec359605313225cf2c47ad7ae6ff4c 450 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 309 320 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 TMO_1439 76ec359605313225cf2c47ad7ae6ff4c 450 SUPERFAMILY SSF53335 146 433 1.16E-69 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1439 76ec359605313225cf2c47ad7ae6ff4c 450 Pfam PF01189 16S rRNA methyltransferase RsmB/F 231 431 8.5E-46 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 TMO_1439 76ec359605313225cf2c47ad7ae6ff4c 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 360 376 3.3E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TMO_1439 76ec359605313225cf2c47ad7ae6ff4c 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 241 251 3.3E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TMO_1439 76ec359605313225cf2c47ad7ae6ff4c 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 416 433 3.3E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TMO_1439 76ec359605313225cf2c47ad7ae6ff4c 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 212 226 3.3E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TMO_1439 76ec359605313225cf2c47ad7ae6ff4c 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 310 322 3.3E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TMO_c0634 830e371dda525b61466040a8fd8df39c 240 SUPERFAMILY SSF56784 6 237 7.03E-28 T 14-10-2018 IPR036412 HAD-like superfamily TMO_c0634 830e371dda525b61466040a8fd8df39c 240 Gene3D G3DSA:3.90.1070.10 93 158 1.6E-55 T 14-10-2018 TMO_c0634 830e371dda525b61466040a8fd8df39c 240 Gene3D G3DSA:3.40.50.1000 7 236 1.6E-55 T 14-10-2018 IPR023214 HAD superfamily TMO_c0634 830e371dda525b61466040a8fd8df39c 240 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 5 239 6.1E-49 T 14-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal TMO_c0634 830e371dda525b61466040a8fd8df39c 240 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 201 1.7E-14 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 TMO_0688 eca34cd5fe09a6ad67425af2dc7dc00c 326 Gene3D G3DSA:2.40.30.10 9 115 5.2E-24 T 14-10-2018 TMO_0688 eca34cd5fe09a6ad67425af2dc7dc00c 326 Pfam PF03143 Elongation factor Tu C-terminal domain 12 115 6.7E-7 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal TMO_0688 eca34cd5fe09a6ad67425af2dc7dc00c 326 Gene3D G3DSA:3.40.50.300 129 325 2.5E-79 T 14-10-2018 TMO_0688 eca34cd5fe09a6ad67425af2dc7dc00c 326 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 151 322 38.578 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 TMO_0688 eca34cd5fe09a6ad67425af2dc7dc00c 326 SUPERFAMILY SSF50465 12 114 9.59E-21 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TMO_0688 eca34cd5fe09a6ad67425af2dc7dc00c 326 Pfam PF01583 Adenylylsulphate kinase 153 304 2.2E-68 T 14-10-2018 TMO_0688 eca34cd5fe09a6ad67425af2dc7dc00c 326 SUPERFAMILY SSF52540 149 320 1.65E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0688 eca34cd5fe09a6ad67425af2dc7dc00c 326 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 139 317 6.2E-77 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 TMO_c0725 23fe93dc4777f04e3851435d8aa8debb 286 Gene3D G3DSA:2.60.120.620 50 180 6.4E-8 T 14-10-2018 TMO_c0725 23fe93dc4777f04e3851435d8aa8debb 286 SUPERFAMILY SSF51197 55 259 4.67E-12 T 14-10-2018 TMO_1791 0cda2b33411371d463cbb8dfee9b1e13 269 SUPERFAMILY SSF52096 12 268 8.71E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_1791 0cda2b33411371d463cbb8dfee9b1e13 269 Gene3D G3DSA:3.90.226.10 15 211 7.8E-65 T 14-10-2018 TMO_1791 0cda2b33411371d463cbb8dfee9b1e13 269 Gene3D G3DSA:1.10.12.10 214 269 1.2E-24 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_1791 0cda2b33411371d463cbb8dfee9b1e13 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 22 268 5.4E-56 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_2044 f38bc01b39bdbd9b99fcb4257102c294 371 Pfam PF13458 Periplasmic binding protein 31 367 1.6E-60 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_2044 f38bc01b39bdbd9b99fcb4257102c294 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 4.1E-27 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_2044 f38bc01b39bdbd9b99fcb4257102c294 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 72 90 4.1E-27 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_2044 f38bc01b39bdbd9b99fcb4257102c294 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 4.1E-27 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_2044 f38bc01b39bdbd9b99fcb4257102c294 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 259 277 4.1E-27 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_2044 f38bc01b39bdbd9b99fcb4257102c294 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 93 103 4.1E-27 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_2044 f38bc01b39bdbd9b99fcb4257102c294 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 4.1E-27 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_2044 f38bc01b39bdbd9b99fcb4257102c294 371 Gene3D G3DSA:3.40.50.2300 149 277 3.6E-118 T 14-10-2018 TMO_2044 f38bc01b39bdbd9b99fcb4257102c294 371 Gene3D G3DSA:3.40.50.2300 38 349 3.6E-118 T 14-10-2018 TMO_2044 f38bc01b39bdbd9b99fcb4257102c294 371 SUPERFAMILY SSF53822 30 370 1.08E-96 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_a0215 01b3ad2bbacff8517a9a5d2e23d2e7c4 1000 Gene3D G3DSA:3.20.20.80 61 251 6.5E-6 T 14-10-2018 TMO_a0215 01b3ad2bbacff8517a9a5d2e23d2e7c4 1000 Gene3D G3DSA:1.20.58.280 452 519 6.5E-40 T 14-10-2018 TMO_a0215 01b3ad2bbacff8517a9a5d2e23d2e7c4 1000 Pfam PF00128 Alpha amylase, catalytic domain 565 675 1.1E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_a0215 01b3ad2bbacff8517a9a5d2e23d2e7c4 1000 SMART SM00642 544 893 2.4E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_a0215 01b3ad2bbacff8517a9a5d2e23d2e7c4 1000 Gene3D G3DSA:2.60.40.10 365 525 6.5E-40 T 14-10-2018 IPR013783 Immunoglobulin-like fold TMO_a0215 01b3ad2bbacff8517a9a5d2e23d2e7c4 1000 Pfam PF11896 Domain of unknown function (DUF3416) 365 538 5.7E-47 T 14-10-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 TMO_a0215 01b3ad2bbacff8517a9a5d2e23d2e7c4 1000 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 362 996 45.99 T 14-10-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 TMO_a0215 01b3ad2bbacff8517a9a5d2e23d2e7c4 1000 SUPERFAMILY SSF51445 516 899 2.49E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_a0215 01b3ad2bbacff8517a9a5d2e23d2e7c4 1000 Gene3D G3DSA:2.60.40.1180 904 1000 7.7E-26 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta TMO_a0215 01b3ad2bbacff8517a9a5d2e23d2e7c4 1000 Gene3D G3DSA:3.20.20.80 539 903 1.6E-159 T 14-10-2018 TMO_2452 de06412d21c8de0f25c08f68283e158b 97 Gene3D G3DSA:3.30.160.190 1 79 1.2E-31 T 14-10-2018 IPR038532 NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2452 de06412d21c8de0f25c08f68283e158b 97 Pfam PF04800 ETC complex I subunit conserved region 3 95 2.3E-34 T 14-10-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 TMO_c0666 f22cae71d453c5221f671ce66263d430 378 SUPERFAMILY SSF53383 7 368 1.13E-72 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0666 f22cae71d453c5221f671ce66263d430 378 PIRSF PIRSF005572 5 376 3.3E-95 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TMO_c0666 f22cae71d453c5221f671ce66263d430 378 Gene3D G3DSA:3.40.640.10 63 228 6.7E-99 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0666 f22cae71d453c5221f671ce66263d430 378 Pfam PF00266 Aminotransferase class-V 8 361 2.1E-48 T 14-10-2018 IPR000192 Aminotransferase class V domain TMO_c0666 f22cae71d453c5221f671ce66263d430 378 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site TMO_c0666 f22cae71d453c5221f671ce66263d430 378 Gene3D G3DSA:3.90.1150.10 8 363 6.7E-99 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0666 f22cae71d453c5221f671ce66263d430 378 Gene3D G3DSA:1.10.260.50 18 273 6.7E-99 T 14-10-2018 TMO_2058 23edc2520c261bc74303ba1abfd8665f 500 SMART SM00387 386 500 1.0E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2058 23edc2520c261bc74303ba1abfd8665f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 478 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2058 23edc2520c261bc74303ba1abfd8665f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2058 23edc2520c261bc74303ba1abfd8665f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 497 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2058 23edc2520c261bc74303ba1abfd8665f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2058 23edc2520c261bc74303ba1abfd8665f 500 Gene3D G3DSA:1.10.287.130 216 342 6.0E-10 T 14-10-2018 TMO_2058 23edc2520c261bc74303ba1abfd8665f 500 Gene3D G3DSA:3.30.565.10 346 500 1.6E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2058 23edc2520c261bc74303ba1abfd8665f 500 SUPERFAMILY SSF47384 257 330 1.41E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_2058 23edc2520c261bc74303ba1abfd8665f 500 SUPERFAMILY SSF55874 339 498 5.63E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2058 23edc2520c261bc74303ba1abfd8665f 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 499 2.7E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0731 d590017ef1d6e621b55dfb38c5851c0e 159 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_c0731 d590017ef1d6e621b55dfb38c5851c0e 159 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 141 2.2E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_c0731 d590017ef1d6e621b55dfb38c5851c0e 159 PIRSF PIRSF001399 1 145 9.8E-65 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_c0731 d590017ef1d6e621b55dfb38c5851c0e 159 Gene3D G3DSA:3.40.50.9100 1 151 1.6E-67 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_c0731 d590017ef1d6e621b55dfb38c5851c0e 159 Pfam PF01220 Dehydroquinase class II 5 140 6.3E-63 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_c0731 d590017ef1d6e621b55dfb38c5851c0e 159 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 159 73.925 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_c0731 d590017ef1d6e621b55dfb38c5851c0e 159 SUPERFAMILY SSF52304 4 146 1.7E-63 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_c0731 d590017ef1d6e621b55dfb38c5851c0e 159 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 19 140 2.0E-37 T 14-10-2018 TMO_0614 964494a62059f7729279de7ec201d9f8 274 SUPERFAMILY SSF53335 20 223 1.11E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0614 964494a62059f7729279de7ec201d9f8 274 Pfam PF05050 Methyltransferase FkbM domain 59 200 5.0E-7 T 14-10-2018 IPR006342 Methyltransferase FkbM TMO_0614 964494a62059f7729279de7ec201d9f8 274 Gene3D G3DSA:3.40.50.150 45 209 4.4E-19 T 14-10-2018 TMO_0614 964494a62059f7729279de7ec201d9f8 274 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 56 178 4.3E-16 T 14-10-2018 IPR006342 Methyltransferase FkbM TMO_3085 424a4a74ea889bb44e688140b5190fe9 474 Pfam PF07719 Tetratricopeptide repeat 165 197 1.7E-6 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 TMO_3085 424a4a74ea889bb44e688140b5190fe9 474 Pfam PF13432 Tetratricopeptide repeat 399 447 0.0051 T 14-10-2018 TMO_3085 424a4a74ea889bb44e688140b5190fe9 474 Pfam PF13432 Tetratricopeptide repeat 223 270 1.2E-5 T 14-10-2018 TMO_3085 424a4a74ea889bb44e688140b5190fe9 474 SUPERFAMILY SSF48452 163 448 8.93E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3085 424a4a74ea889bb44e688140b5190fe9 474 SMART SM00028 164 197 5.9E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_3085 424a4a74ea889bb44e688140b5190fe9 474 SMART SM00028 339 372 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_3085 424a4a74ea889bb44e688140b5190fe9 474 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 5 125 2.0E-28 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI TMO_3085 424a4a74ea889bb44e688140b5190fe9 474 Gene3D G3DSA:1.25.40.10 150 285 3.1E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3085 424a4a74ea889bb44e688140b5190fe9 474 Gene3D G3DSA:1.25.40.10 323 465 5.8E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3480 1d9d109fff24e3c50b4866737cc58288 326 Gene3D G3DSA:1.10.287.470 80 185 5.0E-35 T 14-10-2018 TMO_3480 1d9d109fff24e3c50b4866737cc58288 326 Gene3D G3DSA:2.40.30.170 39 268 5.0E-35 T 14-10-2018 TMO_3480 1d9d109fff24e3c50b4866737cc58288 326 Pfam PF13533 Biotin-lipoyl like 46 93 2.3E-9 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TMO_3480 1d9d109fff24e3c50b4866737cc58288 326 Pfam PF13437 HlyD family secretion protein 185 291 1.2E-13 T 14-10-2018 TMO_3480 1d9d109fff24e3c50b4866737cc58288 326 Gene3D G3DSA:2.40.50.100 46 220 5.0E-35 T 14-10-2018 TMO_3480 1d9d109fff24e3c50b4866737cc58288 326 SUPERFAMILY SSF111369 40 283 3.01E-14 T 14-10-2018 TMO_b0143 988c6c756d3205ccd43cee3f8452e6c3 347 SUPERFAMILY SSF51735 42 328 1.58E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0143 988c6c756d3205ccd43cee3f8452e6c3 347 Gene3D G3DSA:3.40.50.720 39 332 2.1E-24 T 14-10-2018 TMO_1003 d6dc0a519341ea4b8eea981fff344f90 173 Hamap MF_00678 UPF0262 protein . 19 172 38.348 T 14-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 TMO_1003 d6dc0a519341ea4b8eea981fff344f90 173 Pfam PF06793 Uncharacterised protein family (UPF0262) 20 172 1.7E-68 T 14-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 TMO_1003 d6dc0a519341ea4b8eea981fff344f90 173 PIRSF PIRSF032146 13 173 2.9E-67 T 14-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 TMO_1250 9c3df8e5a73f9100fbb7aee966fd17b4 1014 Pfam PF02120 Flagellar hook-length control protein FliK 853 916 2.6E-13 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal TMO_1250 9c3df8e5a73f9100fbb7aee966fd17b4 1014 Gene3D G3DSA:3.30.750.140 829 949 2.2E-8 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily TMO_0236 8bd0e11353447b55faf935689bf3639f 295 SUPERFAMILY SSF53474 56 292 6.55E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0236 8bd0e11353447b55faf935689bf3639f 295 Pfam PF01738 Dienelactone hydrolase family 67 292 2.6E-57 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 TMO_0236 8bd0e11353447b55faf935689bf3639f 295 Gene3D G3DSA:3.40.50.1820 50 291 2.2E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0761 03389f7575f82b39aaccd21093680ae3 406 Gene3D G3DSA:3.40.50.2300 30 338 3.7E-83 T 14-10-2018 TMO_c0761 03389f7575f82b39aaccd21093680ae3 406 Gene3D G3DSA:3.40.50.2300 150 278 3.7E-83 T 14-10-2018 TMO_c0761 03389f7575f82b39aaccd21093680ae3 406 Pfam PF13458 Periplasmic binding protein 30 340 1.5E-51 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_c0761 03389f7575f82b39aaccd21093680ae3 406 SUPERFAMILY SSF53822 30 397 7.06E-82 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_a0323 5f3801dde23e34fde39bc498cd70823a 390 Gene3D G3DSA:3.40.50.2000 186 361 8.3E-22 T 14-10-2018 TMO_a0323 5f3801dde23e34fde39bc498cd70823a 390 Gene3D G3DSA:3.40.50.2000 17 374 8.3E-22 T 14-10-2018 TMO_a0323 5f3801dde23e34fde39bc498cd70823a 390 Pfam PF00534 Glycosyl transferases group 1 261 346 7.7E-9 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 TMO_a0323 5f3801dde23e34fde39bc498cd70823a 390 SUPERFAMILY SSF53756 13 380 5.83E-36 T 14-10-2018 TMO_a0323 5f3801dde23e34fde39bc498cd70823a 390 Pfam PF13579 Glycosyl transferase 4-like domain 18 192 8.0E-10 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TMO_0576 4cf4ccb64baf1cb94d514935251a92e1 258 SMART SM00271 202 256 3.4E-4 T 14-10-2018 IPR001623 DnaJ domain TMO_0576 4cf4ccb64baf1cb94d514935251a92e1 258 SUPERFAMILY SSF46565 197 256 1.01E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_0576 4cf4ccb64baf1cb94d514935251a92e1 258 Gene3D G3DSA:1.10.287.110 192 254 4.2E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_2234 8749144c4b5204b330012bee26c842e8 230 SUPERFAMILY SSF103515 130 221 3.92E-6 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_2234 8749144c4b5204b330012bee26c842e8 230 Gene3D G3DSA:2.40.128.130 123 227 1.7E-5 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_2234 8749144c4b5204b330012bee26c842e8 230 Pfam PF05275 Copper resistance protein B precursor (CopB) 25 230 1.8E-95 T 14-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 TMO_b0592 acb32f482c37c9f4df418d08734ecb1a 443 Pfam PF01764 Lipase (class 3) 183 275 5.5E-5 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 TMO_b0592 acb32f482c37c9f4df418d08734ecb1a 443 Gene3D G3DSA:3.40.50.1820 66 342 2.4E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0592 acb32f482c37c9f4df418d08734ecb1a 443 SUPERFAMILY SSF53474 105 278 4.1E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0130 3184e594ff7fd502252d0d1f35ab4a04 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 17 96 2.2E-9 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain TMO_b0130 3184e594ff7fd502252d0d1f35ab4a04 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 252 6.6E-11 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 TMO_b0130 3184e594ff7fd502252d0d1f35ab4a04 279 Gene3D G3DSA:2.60.120.330 2 278 7.7E-70 T 14-10-2018 IPR027443 Isopenicillin N synthase-like TMO_b0130 3184e594ff7fd502252d0d1f35ab4a04 279 SUPERFAMILY SSF51197 4 275 1.37E-48 T 14-10-2018 TMO_0742 77e2faf0c8805596dcb2b397dee15a96 160 Pfam PF07617 Protein of unknown function (DUF1579) 5 157 1.1E-56 T 14-10-2018 IPR011473 Protein of unknown function DUF1579 TMO_1197 abad10e3a748b38214eebbb83485894f 607 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 43 602 2.6E-240 T 14-10-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 TMO_1197 abad10e3a748b38214eebbb83485894f 607 SUPERFAMILY SSF75304 9 452 9.42E-118 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1197 abad10e3a748b38214eebbb83485894f 607 Gene3D G3DSA:3.90.1300.10 44 446 2.5E-157 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1197 abad10e3a748b38214eebbb83485894f 607 Pfam PF01425 Amidase 29 443 8.9E-86 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1197 abad10e3a748b38214eebbb83485894f 607 Gene3D G3DSA:3.10.490.10 474 607 2.2E-49 T 14-10-2018 TMO_1197 abad10e3a748b38214eebbb83485894f 607 Gene3D G3DSA:1.20.58.1700 299 372 2.5E-157 T 14-10-2018 TMO_3367 0fc6d973adc6af9a6030b8ca152e5298 304 Pfam PF05035 2-keto-3-deoxy-galactonokinase 10 293 3.9E-91 T 14-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 TMO_3367 0fc6d973adc6af9a6030b8ca152e5298 304 Gene3D G3DSA:3.30.420.310 80 302 2.7E-67 T 14-10-2018 TMO_3367 0fc6d973adc6af9a6030b8ca152e5298 304 Gene3D G3DSA:3.30.420.300 1 79 6.5E-30 T 14-10-2018 TMO_2424 a402af56f6d417718c525fcf2bde8aaf 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 139 4.8E-61 T 14-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 TMO_2424 a402af56f6d417718c525fcf2bde8aaf 143 Gene3D G3DSA:3.30.300.20 1 142 3.4E-45 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_2424 a402af56f6d417718c525fcf2bde8aaf 143 Pfam PF02566 OsmC-like protein 43 138 2.6E-21 T 14-10-2018 IPR003718 OsmC/Ohr family TMO_2424 a402af56f6d417718c525fcf2bde8aaf 143 SUPERFAMILY SSF82784 1 141 7.46E-40 T 14-10-2018 IPR036102 OsmC/Ohr superfamily TMO_2070 167b42d477e3171d4f90cf8026571933 341 SUPERFAMILY SSF144083 276 338 3.92E-21 T 14-10-2018 TMO_2070 167b42d477e3171d4f90cf8026571933 341 Gene3D G3DSA:1.20.58.340 265 341 9.5E-27 T 14-10-2018 TMO_2070 167b42d477e3171d4f90cf8026571933 341 Pfam PF01544 CorA-like Mg2+ transporter protein 23 166 4.4E-18 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 TMO_2070 167b42d477e3171d4f90cf8026571933 341 Pfam PF01544 CorA-like Mg2+ transporter protein 211 337 6.0E-30 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 TMO_2070 167b42d477e3171d4f90cf8026571933 341 Gene3D G3DSA:3.30.460.20 11 126 2.0E-6 T 14-10-2018 TMO_2070 167b42d477e3171d4f90cf8026571933 341 SUPERFAMILY SSF143865 2 279 6.54E-34 T 14-10-2018 TMO_0697 4515ca249e96193caca5a84dc79f59e2 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 6.2E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_0697 4515ca249e96193caca5a84dc79f59e2 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 8.5E-41 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_0697 4515ca249e96193caca5a84dc79f59e2 383 Gene3D G3DSA:2.40.110.10 122 236 6.6E-44 T 14-10-2018 TMO_0697 4515ca249e96193caca5a84dc79f59e2 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_0697 4515ca249e96193caca5a84dc79f59e2 383 Gene3D G3DSA:1.20.140.10 237 383 2.2E-43 T 14-10-2018 TMO_0697 4515ca249e96193caca5a84dc79f59e2 383 SUPERFAMILY SSF56645 4 242 3.14E-91 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_0697 4515ca249e96193caca5a84dc79f59e2 383 Gene3D G3DSA:1.10.540.10 1 120 3.9E-43 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_0697 4515ca249e96193caca5a84dc79f59e2 383 SUPERFAMILY SSF47203 229 381 2.09E-47 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_0697 4515ca249e96193caca5a84dc79f59e2 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_0697 4515ca249e96193caca5a84dc79f59e2 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 4.0E-39 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_1419 4f9a46dec6d0f6862ab34592767ca4e4 348 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 344 1.3E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1419 4f9a46dec6d0f6862ab34592767ca4e4 348 SUPERFAMILY SSF161098 102 329 1.39E-14 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0532 4fd5f9688d5f03677fbe243bb49f5256 760 Pfam PF00924 Mechanosensitive ion channel 526 726 7.2E-46 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TMO_b0532 4fd5f9688d5f03677fbe243bb49f5256 760 SUPERFAMILY SSF82861 471 567 1.05E-12 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TMO_b0532 4fd5f9688d5f03677fbe243bb49f5256 760 SUPERFAMILY SSF82689 632 733 4.58E-17 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TMO_b0532 4fd5f9688d5f03677fbe243bb49f5256 760 Gene3D G3DSA:2.30.30.60 584 633 1.6E-15 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TMO_b0532 4fd5f9688d5f03677fbe243bb49f5256 760 SUPERFAMILY SSF50182 569 632 2.48E-12 T 14-10-2018 IPR010920 LSM domain superfamily TMO_b0532 4fd5f9688d5f03677fbe243bb49f5256 760 Gene3D G3DSA:3.30.70.100 639 724 1.4E-22 T 14-10-2018 TMO_3371 82c77b51d21ac4f6035213c6bdfab4f8 372 SUPERFAMILY SSF46626 178 357 2.36E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_3371 82c77b51d21ac4f6035213c6bdfab4f8 372 PIRSF PIRSF000294 4 371 8.5E-68 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 TMO_3371 82c77b51d21ac4f6035213c6bdfab4f8 372 SUPERFAMILY SSF46626 25 189 2.41E-40 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_3371 82c77b51d21ac4f6035213c6bdfab4f8 372 Gene3D G3DSA:1.10.760.10 37 187 7.3E-82 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_3371 82c77b51d21ac4f6035213c6bdfab4f8 372 Gene3D G3DSA:1.10.760.10 188 357 7.3E-82 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_3371 82c77b51d21ac4f6035213c6bdfab4f8 372 Pfam PF03150 Di-haem cytochrome c peroxidase 46 201 1.7E-38 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 TMO_3371 82c77b51d21ac4f6035213c6bdfab4f8 372 TIGRFAM TIGR04039 MXAN_0977_Heme2: di-heme enzyme, MXAN_0977 family 37 370 7.3E-143 T 14-10-2018 IPR023929 Di-heme enzyme, MXAN0977 TMO_1602 e3277cdcbeb88f910d27e887788503c4 306 Pfam PF03466 LysR substrate binding domain 93 295 6.2E-31 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1602 e3277cdcbeb88f910d27e887788503c4 306 SUPERFAMILY SSF53850 93 300 1.55E-36 T 14-10-2018 TMO_1602 e3277cdcbeb88f910d27e887788503c4 306 Gene3D G3DSA:3.40.190.290 95 295 1.8E-38 T 14-10-2018 TMO_1602 e3277cdcbeb88f910d27e887788503c4 306 SUPERFAMILY SSF46785 7 116 7.3E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1602 e3277cdcbeb88f910d27e887788503c4 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1602 e3277cdcbeb88f910d27e887788503c4 306 Gene3D G3DSA:1.10.10.10 7 88 4.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1602 e3277cdcbeb88f910d27e887788503c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1602 e3277cdcbeb88f910d27e887788503c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1602 e3277cdcbeb88f910d27e887788503c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2717 12592f6a6e275af892e327d45950067f 912 SUPERFAMILY SSF81653 126 235 1.83E-29 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 Gene3D G3DSA:3.40.50.1000 333 692 4.4E-271 T 14-10-2018 IPR023214 HAD superfamily TMO_2717 12592f6a6e275af892e327d45950067f 912 Gene3D G3DSA:1.20.1110.10 66 902 4.4E-271 T 14-10-2018 TMO_2717 12592f6a6e275af892e327d45950067f 912 SUPERFAMILY SSF81665 15 908 2.09E-115 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 SUPERFAMILY SSF56784 334 750 1.93E-63 T 14-10-2018 IPR036412 HAD-like superfamily TMO_2717 12592f6a6e275af892e327d45950067f 912 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 610 737 1.3E-34 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 94 357 5.4E-43 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 Pfam PF00122 E1-E2 ATPase 123 316 3.0E-51 T 14-10-2018 TMO_2717 12592f6a6e275af892e327d45950067f 912 Gene3D G3DSA:3.40.1110.10 346 553 4.4E-271 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 Pfam PF00690 Cation transporter/ATPase, N-terminus 16 83 4.5E-15 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 SMART SM00831 15 88 5.2E-27 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 Gene3D G3DSA:2.70.150.10 32 238 4.4E-271 T 14-10-2018 TMO_2717 12592f6a6e275af892e327d45950067f 912 Pfam PF00689 Cation transporting ATPase, C-terminus 732 904 1.3E-35 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 SUPERFAMILY SSF81660 343 550 1.01E-43 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 338 344 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 679 704 5.2E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 504 522 5.2E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 647 663 5.2E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 619 635 5.2E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TMO_2717 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 173 187 5.8E-43 T 14-10-2018 TMO_2717 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 557 5.8E-43 T 14-10-2018 TMO_2717 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 568 578 5.8E-43 T 14-10-2018 TMO_2717 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 647 666 5.8E-43 T 14-10-2018 TMO_2717 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 336 350 5.8E-43 T 14-10-2018 TMO_2717 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 671 683 5.8E-43 T 14-10-2018 TMO_2717 12592f6a6e275af892e327d45950067f 912 Pfam PF00702 haloacid dehalogenase-like hydrolase 334 661 2.2E-21 T 14-10-2018 TMO_3127 533ab3de38b6cbb30e55be32806fd6aa 165 SMART SM00347 55 155 5.8E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_3127 533ab3de38b6cbb30e55be32806fd6aa 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 111 2.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_3127 533ab3de38b6cbb30e55be32806fd6aa 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 95 2.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_3127 533ab3de38b6cbb30e55be32806fd6aa 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 145 165 2.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_3127 533ab3de38b6cbb30e55be32806fd6aa 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 131 2.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_3127 533ab3de38b6cbb30e55be32806fd6aa 165 Gene3D G3DSA:1.10.10.10 20 165 9.3E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3127 533ab3de38b6cbb30e55be32806fd6aa 165 Pfam PF01047 MarR family 62 119 2.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_3127 533ab3de38b6cbb30e55be32806fd6aa 165 SUPERFAMILY SSF46785 30 164 1.09E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0463 9f76ce9e5043988834ab039b6fd525aa 241 Gene3D G3DSA:1.10.3720.10 3 217 7.1E-49 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0463 9f76ce9e5043988834ab039b6fd525aa 241 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 1.4E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0463 9f76ce9e5043988834ab039b6fd525aa 241 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 111 2.0E-27 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_c0463 9f76ce9e5043988834ab039b6fd525aa 241 SUPERFAMILY SSF161098 15 202 1.2E-40 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2845 8db18f36f7ff4a2e850f9c763da44561 353 Gene3D G3DSA:3.40.190.10 142 347 2.0E-86 T 14-10-2018 TMO_2845 8db18f36f7ff4a2e850f9c763da44561 353 Pfam PF13416 Bacterial extracellular solute-binding protein 57 317 1.3E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_2845 8db18f36f7ff4a2e850f9c763da44561 353 SUPERFAMILY SSF53850 36 349 2.01E-68 T 14-10-2018 TMO_2845 8db18f36f7ff4a2e850f9c763da44561 353 Gene3D G3DSA:3.40.190.10 55 319 2.0E-86 T 14-10-2018 TMO_b0230 f4541a3e57f898930d7b161269d3057c 237 SUPERFAMILY SSF52172 31 142 4.27E-9 T 14-10-2018 IPR011006 CheY-like superfamily TMO_b0230 f4541a3e57f898930d7b161269d3057c 237 Gene3D G3DSA:3.40.50.2300 30 146 4.2E-24 T 14-10-2018 TMO_c0699 cfb3c03fc79257f9f913f10346b00792 162 Gene3D G3DSA:3.10.129.10 4 156 2.4E-44 T 14-10-2018 TMO_c0699 cfb3c03fc79257f9f913f10346b00792 162 Pfam PF01575 MaoC like domain 21 122 2.6E-19 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_c0699 cfb3c03fc79257f9f913f10346b00792 162 SUPERFAMILY SSF54637 12 160 4.08E-37 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 Gene3D G3DSA:1.20.1440.90 297 423 2.5E-12 T 14-10-2018 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 SUPERFAMILY SSF51621 26 931 4.87E-292 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 269 284 6.9E-56 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 207 223 6.9E-56 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 420 440 6.9E-56 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 758 784 6.9E-56 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 154 167 6.9E-56 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 582 602 6.9E-56 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 624 653 6.9E-56 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 584 596 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 17 931 18.882 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 155 166 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_0414 70c9503c455cb6c43bf3eb8058321dca 931 Pfam PF00311 Phosphoenolpyruvate carboxylase 151 931 1.1E-278 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_c0214 7f619a64d80c900b22227b604b3ac27d 351 SUPERFAMILY SSF53474 14 343 1.69E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0214 7f619a64d80c900b22227b604b3ac27d 351 Gene3D G3DSA:3.40.50.1820 12 350 6.4E-100 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0214 7f619a64d80c900b22227b604b3ac27d 351 PIRSF PIRSF000443 1 348 8.7E-77 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 TMO_c0214 7f619a64d80c900b22227b604b3ac27d 351 Pfam PF00561 alpha/beta hydrolase fold 73 312 7.7E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 Pfam PF03129 Anticodon binding domain 303 400 5.1E-12 T 14-10-2018 IPR004154 Anticodon-binding TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 Gene3D G3DSA:3.30.930.10 6 296 3.7E-99 T 14-10-2018 TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 120 284 5.9E-16 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 SUPERFAMILY SSF55681 16 290 5.76E-74 T 14-10-2018 TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 452 507 5.5E-13 T 14-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 SUPERFAMILY SSF52954 292 423 3.27E-22 T 14-10-2018 TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 Gene3D G3DSA:3.30.110.30 428 507 1.8E-13 T 14-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 13 507 1.4E-144 T 14-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 Gene3D G3DSA:3.40.50.800 297 421 1.6E-23 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 SMART SM00946 433 507 4.6E-19 T 14-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 Hamap MF_01571 Proline--tRNA ligase [proS]. 11 507 41.358 T 14-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TMO_0264 20149152d126feb8b3e28d20f17a63b5 507 SUPERFAMILY SSF64586 429 507 1.08E-13 T 14-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TMO_2131 f78cf00a009b234c763616e68bbcedca 339 Gene3D G3DSA:3.90.850.10 33 333 1.1E-70 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_2131 f78cf00a009b234c763616e68bbcedca 339 SUPERFAMILY SSF56529 145 336 7.59E-64 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_2131 f78cf00a009b234c763616e68bbcedca 339 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 143 334 3.6E-59 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 TMO_2145 3ef3458a4c6377b541117ec0fc826ccb 484 Gene3D G3DSA:3.40.190.10 147 270 1.2E-151 T 14-10-2018 TMO_2145 3ef3458a4c6377b541117ec0fc826ccb 484 Pfam PF13379 NMT1-like family 55 318 1.8E-95 T 14-10-2018 TMO_2145 3ef3458a4c6377b541117ec0fc826ccb 484 SUPERFAMILY SSF53850 58 306 1.75E-27 T 14-10-2018 TMO_2145 3ef3458a4c6377b541117ec0fc826ccb 484 Gene3D G3DSA:3.40.190.10 63 451 1.2E-151 T 14-10-2018 TMO_c0803 1d61614901c436a2716b3732bacbaaf2 331 PRINTS PR00075 Fatty acid desaturase family 1 signature 117 146 1.3E-6 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 TMO_c0803 1d61614901c436a2716b3732bacbaaf2 331 PRINTS PR00075 Fatty acid desaturase family 1 signature 57 79 1.3E-6 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 TMO_c0803 1d61614901c436a2716b3732bacbaaf2 331 PRINTS PR00075 Fatty acid desaturase family 1 signature 80 100 1.3E-6 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 TMO_c0803 1d61614901c436a2716b3732bacbaaf2 331 Pfam PF00487 Fatty acid desaturase 60 289 1.8E-20 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 TMO_c0454 92f5663f260c9d7dd5026b6a8ea6842f 329 Pfam PF00005 ABC transporter 25 175 4.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0454 92f5663f260c9d7dd5026b6a8ea6842f 329 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0454 92f5663f260c9d7dd5026b6a8ea6842f 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 226 315 1.8E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_c0454 92f5663f260c9d7dd5026b6a8ea6842f 329 SUPERFAMILY SSF52540 4 246 8.84E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0454 92f5663f260c9d7dd5026b6a8ea6842f 329 SMART SM00382 33 225 1.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0454 92f5663f260c9d7dd5026b6a8ea6842f 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 227 295 5.6E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_c0454 92f5663f260c9d7dd5026b6a8ea6842f 329 Gene3D G3DSA:3.40.50.300 2 321 7.9E-99 T 14-10-2018 TMO_1519 0f7dc925df33c7f0c27ade7afb887fb8 123 TIGRFAM TIGR03793 TOMM_pelo: NHLP leader peptide domain 20 94 4.1E-18 T 14-10-2018 IPR022513 Thiazole/oxazole-modified microcins TMO_1519 0f7dc925df33c7f0c27ade7afb887fb8 123 SUPERFAMILY SSF56209 14 95 3.01E-16 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_1519 0f7dc925df33c7f0c27ade7afb887fb8 123 ProDom PD007559 HYDRATASE NITRILE ALPHA SUBUNIT LYASE CHAIN METAL-BINDING DIRECT SEQUENCING NITRILASE 17 71 0.003 T 14-10-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_1519 0f7dc925df33c7f0c27ade7afb887fb8 123 Gene3D G3DSA:3.90.330.10 2 78 1.8E-10 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_1519 0f7dc925df33c7f0c27ade7afb887fb8 123 Pfam PF02979 Nitrile hydratase, alpha chain 21 71 5.1E-7 T 14-10-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_c0924 93a3071b97eff072aff9c80352344b3a 496 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 24 491 6.3E-226 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 TMO_c0924 93a3071b97eff072aff9c80352344b3a 496 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 221 276 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0924 93a3071b97eff072aff9c80352344b3a 496 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 29 461 1.0E-115 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0924 93a3071b97eff072aff9c80352344b3a 496 Gene3D G3DSA:1.20.210.10 18 492 2.6E-190 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0924 93a3071b97eff072aff9c80352344b3a 496 SUPERFAMILY SSF81442 25 485 9.42E-122 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_0130 c85a86fceb6560d10d7edad7591a1cad 219 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 36 7.8E-16 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative TMO_0130 c85a86fceb6560d10d7edad7591a1cad 219 Pfam PF13717 zinc-ribbon domain 1 35 7.2E-15 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative TMO_c0088 76e50bafdd230fa75ddb1fe8555a8f21 146 SUPERFAMILY SSF50249 2 134 1.75E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_c0088 76e50bafdd230fa75ddb1fe8555a8f21 146 Gene3D G3DSA:2.40.50.140 3 146 9.3E-22 T 14-10-2018 TMO_c0088 76e50bafdd230fa75ddb1fe8555a8f21 146 Pfam PF00436 Single-strand binding protein family 7 109 1.9E-12 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 TMO_c0088 76e50bafdd230fa75ddb1fe8555a8f21 146 PIRSF PIRSF002070 1 146 5.3E-27 T 14-10-2018 TMO_a0131 63c9c0685989c0d0bbdb63c598b6ce5c 539 Gene3D G3DSA:3.10.105.10 299 510 5.6E-48 T 14-10-2018 TMO_a0131 63c9c0685989c0d0bbdb63c598b6ce5c 539 SUPERFAMILY SSF53850 38 537 5.43E-109 T 14-10-2018 TMO_a0131 63c9c0685989c0d0bbdb63c598b6ce5c 539 PIRSF PIRSF002741 51 534 1.9E-80 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_a0131 63c9c0685989c0d0bbdb63c598b6ce5c 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 456 1.1E-79 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_a0131 63c9c0685989c0d0bbdb63c598b6ce5c 539 Gene3D G3DSA:3.40.190.10 29 298 1.5E-55 T 14-10-2018 TMO_a0447 9bfec6eadb014377291248c57a9a63b8 281 Pfam PF00378 Enoyl-CoA hydratase/isomerase 22 281 2.8E-48 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_a0447 9bfec6eadb014377291248c57a9a63b8 281 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 122 142 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_a0447 9bfec6eadb014377291248c57a9a63b8 281 Gene3D G3DSA:3.90.226.10 7 223 7.9E-68 T 14-10-2018 TMO_a0447 9bfec6eadb014377291248c57a9a63b8 281 Gene3D G3DSA:1.10.12.10 224 277 4.3E-26 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_a0447 9bfec6eadb014377291248c57a9a63b8 281 SUPERFAMILY SSF52096 9 281 1.34E-82 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_3104 ee16ca848fc3158c4257e5b87dcff5fe 471 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 154 437 4.0E-26 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 TMO_3104 ee16ca848fc3158c4257e5b87dcff5fe 471 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 12 150 1.3E-32 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 TMO_3104 ee16ca848fc3158c4257e5b87dcff5fe 471 Gene3D G3DSA:3.40.50.720 12 422 2.3E-190 T 14-10-2018 TMO_3104 ee16ca848fc3158c4257e5b87dcff5fe 471 Gene3D G3DSA:3.30.360.30 156 467 2.3E-190 T 14-10-2018 IPR023181 Homospermidine synthase-like, C-terminal KEGG: 00960+2.5.1.44 TMO_1001 fbea45d8074faf9ab3b3d9c07df373cc 227 Gene3D G3DSA:3.40.190.10 12 206 1.4E-62 T 14-10-2018 TMO_1001 fbea45d8074faf9ab3b3d9c07df373cc 227 Gene3D G3DSA:3.40.190.10 104 190 1.4E-62 T 14-10-2018 TMO_1001 fbea45d8074faf9ab3b3d9c07df373cc 227 SUPERFAMILY SSF53850 10 221 7.6E-60 T 14-10-2018 TMO_1001 fbea45d8074faf9ab3b3d9c07df373cc 227 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 11 198 3.1E-53 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 TMO_1001 fbea45d8074faf9ab3b3d9c07df373cc 227 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 10 222 47.485 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 TMO_1001 fbea45d8074faf9ab3b3d9c07df373cc 227 Pfam PF01634 ATP phosphoribosyltransferase 62 218 3.4E-44 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 TMO_1940 921bdc41eeda725898b2a39110827b10 262 Gene3D G3DSA:3.40.50.300 1 256 9.0E-68 T 14-10-2018 TMO_1940 921bdc41eeda725898b2a39110827b10 262 SUPERFAMILY SSF52540 13 228 5.73E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1940 921bdc41eeda725898b2a39110827b10 262 Pfam PF00005 ABC transporter 23 172 4.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1940 921bdc41eeda725898b2a39110827b10 262 SMART SM00382 32 220 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0483 f85651ab8fe9a9fbea49b47ecf860929 596 SUPERFAMILY SSF52540 362 593 4.07E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0483 f85651ab8fe9a9fbea49b47ecf860929 596 Gene3D G3DSA:3.40.50.300 362 596 3.6E-69 T 14-10-2018 TMO_b0483 f85651ab8fe9a9fbea49b47ecf860929 596 SUPERFAMILY SSF90123 22 303 1.14E-21 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_b0483 f85651ab8fe9a9fbea49b47ecf860929 596 Gene3D G3DSA:1.20.1560.10 62 346 3.1E-14 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_b0483 f85651ab8fe9a9fbea49b47ecf860929 596 SMART SM00382 401 591 6.7E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0483 f85651ab8fe9a9fbea49b47ecf860929 596 ProSitePatterns PS00211 ABC transporters family signature. 517 531 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0483 f85651ab8fe9a9fbea49b47ecf860929 596 Pfam PF00664 ABC transporter transmembrane region 83 293 3.4E-8 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_b0483 f85651ab8fe9a9fbea49b47ecf860929 596 Pfam PF00005 ABC transporter 392 544 2.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0492 fee5023307a97aa7d8307092b02f6c81 519 Gene3D G3DSA:3.40.309.10 275 471 1.5E-166 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_c0492 fee5023307a97aa7d8307092b02f6c81 519 Pfam PF00171 Aldehyde dehydrogenase family 39 501 5.0E-163 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_c0492 fee5023307a97aa7d8307092b02f6c81 519 SUPERFAMILY SSF53720 28 504 3.14E-157 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_c0492 fee5023307a97aa7d8307092b02f6c81 519 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 270 277 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_c0492 fee5023307a97aa7d8307092b02f6c81 519 Gene3D G3DSA:3.40.605.10 33 499 1.5E-166 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_c0471 80a073ee539828dbaa90356e9db00909 405 SUPERFAMILY SSF51998 1 396 7.14E-80 T 14-10-2018 TMO_c0471 80a073ee539828dbaa90356e9db00909 405 Gene3D G3DSA:3.20.70.20 1 400 3.6E-93 T 14-10-2018 TMO_c0471 80a073ee539828dbaa90356e9db00909 405 PRINTS PR01183 Ribonucleotide reductase large chain signature 265 292 3.8E-27 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_c0471 80a073ee539828dbaa90356e9db00909 405 PRINTS PR01183 Ribonucleotide reductase large chain signature 132 155 3.8E-27 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_c0471 80a073ee539828dbaa90356e9db00909 405 PRINTS PR01183 Ribonucleotide reductase large chain signature 170 192 3.8E-27 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_c0471 80a073ee539828dbaa90356e9db00909 405 PRINTS PR01183 Ribonucleotide reductase large chain signature 198 221 3.8E-27 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_c0471 80a073ee539828dbaa90356e9db00909 405 Pfam PF02867 Ribonucleotide reductase, barrel domain 1 392 1.8E-65 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_c0471 80a073ee539828dbaa90356e9db00909 405 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 254 276 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_2212 1fd2b8a5560776774af057f05fde0301 462 Pfam PF00817 impB/mucB/samB family 2 111 3.2E-5 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TMO_2212 1fd2b8a5560776774af057f05fde0301 462 Gene3D G3DSA:2.30.40.20 2 34 1.9E-6 T 14-10-2018 TMO_2212 1fd2b8a5560776774af057f05fde0301 462 Gene3D G3DSA:1.10.150.20 135 187 1.9E-6 T 14-10-2018 TMO_2212 1fd2b8a5560776774af057f05fde0301 462 Gene3D G3DSA:3.30.70.270 35 188 1.9E-6 T 14-10-2018 TMO_2212 1fd2b8a5560776774af057f05fde0301 462 SUPERFAMILY SSF56672 1 189 4.6E-33 T 14-10-2018 TMO_2960 33e4cc4407ce84275520aa046da1fc6e 207 Pfam PF01810 LysE type translocator 27 199 1.0E-15 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_2699 820004241d0991416a744f2155e7cf2b 322 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 14 311 2.7E-86 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TMO_2699 820004241d0991416a744f2155e7cf2b 322 SUPERFAMILY SSF53328 12 215 9.42E-69 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_2699 820004241d0991416a744f2155e7cf2b 322 SUPERFAMILY SSF50486 217 314 6.28E-25 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 TMO_2699 820004241d0991416a744f2155e7cf2b 322 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 13 315 35.519 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TMO_2699 820004241d0991416a744f2155e7cf2b 322 Pfam PF02911 Formyl transferase, C-terminal domain 215 312 6.1E-24 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_2699 820004241d0991416a744f2155e7cf2b 322 Gene3D G3DSA:3.40.50.170 8 217 2.7E-80 T 14-10-2018 TMO_2699 820004241d0991416a744f2155e7cf2b 322 Pfam PF00551 Formyl transferase 14 191 6.1E-43 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_2699 820004241d0991416a744f2155e7cf2b 322 Gene3D G3DSA:3.10.25.10 218 322 3.1E-23 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_2699 820004241d0991416a744f2155e7cf2b 322 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 144 167 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_0088 667dc18d90089a550c6666ee1ad37c00 390 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 105 333 4.2E-26 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 TMO_3106 d35e56faa0146cc34bf061622105898c 920 Pfam PF12770 CHAT domain 638 919 8.3E-58 T 14-10-2018 IPR024983 CHAT domain TMO_3106 d35e56faa0146cc34bf061622105898c 920 Gene3D G3DSA:1.25.40.10 155 338 3.9E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3106 d35e56faa0146cc34bf061622105898c 920 Gene3D G3DSA:1.25.40.10 31 154 4.7E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3106 d35e56faa0146cc34bf061622105898c 920 SUPERFAMILY SSF48452 199 324 1.08E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3106 d35e56faa0146cc34bf061622105898c 920 Pfam PF13424 Tetratricopeptide repeat 159 227 5.0E-11 T 14-10-2018 TMO_3106 d35e56faa0146cc34bf061622105898c 920 Pfam PF13424 Tetratricopeptide repeat 245 312 6.9E-12 T 14-10-2018 TMO_3106 d35e56faa0146cc34bf061622105898c 920 SUPERFAMILY SSF48452 118 229 6.25E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3106 d35e56faa0146cc34bf061622105898c 920 SUPERFAMILY SSF48452 48 151 7.3E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_b0371 9d444a1cdd417a4f9bb9fa2abfdc50fa 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.9E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_b0371 9d444a1cdd417a4f9bb9fa2abfdc50fa 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.9E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_b0371 9d444a1cdd417a4f9bb9fa2abfdc50fa 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.9E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_b0371 9d444a1cdd417a4f9bb9fa2abfdc50fa 212 Pfam PF00072 Response regulator receiver domain 7 118 3.2E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0371 9d444a1cdd417a4f9bb9fa2abfdc50fa 212 Gene3D G3DSA:1.10.10.10 131 210 2.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0371 9d444a1cdd417a4f9bb9fa2abfdc50fa 212 SUPERFAMILY SSF52172 5 131 3.56E-26 T 14-10-2018 IPR011006 CheY-like superfamily TMO_b0371 9d444a1cdd417a4f9bb9fa2abfdc50fa 212 SMART SM00421 150 207 3.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_b0371 9d444a1cdd417a4f9bb9fa2abfdc50fa 212 SMART SM00448 4 118 2.0E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_b0371 9d444a1cdd417a4f9bb9fa2abfdc50fa 212 Gene3D G3DSA:3.40.50.2300 2 130 2.1E-27 T 14-10-2018 TMO_b0371 9d444a1cdd417a4f9bb9fa2abfdc50fa 212 SUPERFAMILY SSF46894 146 210 7.48E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_b0371 9d444a1cdd417a4f9bb9fa2abfdc50fa 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 1.5E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0430 18f42c8c3c63707037142147a9632344 240 Pfam PF00005 ABC transporter 24 168 2.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0430 18f42c8c3c63707037142147a9632344 240 Gene3D G3DSA:3.40.50.300 5 240 4.6E-62 T 14-10-2018 TMO_c0430 18f42c8c3c63707037142147a9632344 240 SMART SM00382 33 217 9.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0430 18f42c8c3c63707037142147a9632344 240 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0430 18f42c8c3c63707037142147a9632344 240 SUPERFAMILY SSF52540 8 237 6.92E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2757 b695d30aa4f7768670efdc66af8a3ff7 1418 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1412 20.104 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 TMO_2757 b695d30aa4f7768670efdc66af8a3ff7 1418 Pfam PF02463 RecF/RecN/SMC N terminal domain 5 1403 1.3E-56 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TMO_2757 b695d30aa4f7768670efdc66af8a3ff7 1418 Gene3D G3DSA:3.40.50.300 1257 1418 1.0E-44 T 14-10-2018 TMO_2757 b695d30aa4f7768670efdc66af8a3ff7 1418 SUPERFAMILY SSF52540 1 1411 4.0E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2757 b695d30aa4f7768670efdc66af8a3ff7 1418 PIRSF PIRSF005719 435 618 0.0012 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein TMO_2757 b695d30aa4f7768670efdc66af8a3ff7 1418 PIRSF PIRSF005719 1000 1417 2.9E-92 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein TMO_2757 b695d30aa4f7768670efdc66af8a3ff7 1418 PIRSF PIRSF005719 664 1017 8.5E-22 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein TMO_2757 b695d30aa4f7768670efdc66af8a3ff7 1418 PIRSF PIRSF005719 1 479 6.2E-98 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein TMO_2757 b695d30aa4f7768670efdc66af8a3ff7 1418 Gene3D G3DSA:3.40.50.300 1 247 2.8E-41 T 14-10-2018 TMO_2757 b695d30aa4f7768670efdc66af8a3ff7 1418 SUPERFAMILY SSF75553 586 744 4.32E-6 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 TMO_0396 602a136e938322632fcf4133bcfdfad6 314 SUPERFAMILY SSF103481 208 306 2.35E-10 T 14-10-2018 TMO_0396 602a136e938322632fcf4133bcfdfad6 314 Gene3D G3DSA:1.10.3730.20 73 166 3.3E-5 T 14-10-2018 TMO_0396 602a136e938322632fcf4133bcfdfad6 314 SUPERFAMILY SSF103481 63 161 7.72E-11 T 14-10-2018 TMO_0396 602a136e938322632fcf4133bcfdfad6 314 Pfam PF00892 EamA-like transporter family 28 160 3.3E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_0396 602a136e938322632fcf4133bcfdfad6 314 Pfam PF00892 EamA-like transporter family 172 305 5.2E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_b0583 75424e44bc776df98b6f4a4709f3a9a3 174 Pfam PF13471 Transglutaminase-like superfamily 44 161 4.7E-21 T 14-10-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal TMO_a0081 408030dfaa1894ce8e7ca6308d2d44b2 468 SUPERFAMILY SSF49879 17 116 1.68E-19 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 TMO_a0081 408030dfaa1894ce8e7ca6308d2d44b2 468 Pfam PF00498 FHA domain 29 94 7.2E-14 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 TMO_a0081 408030dfaa1894ce8e7ca6308d2d44b2 468 SMART SM00240 27 78 8.5E-11 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 TMO_a0081 408030dfaa1894ce8e7ca6308d2d44b2 468 Gene3D G3DSA:2.60.200.20 7 104 9.8E-19 T 14-10-2018 TMO_a0081 408030dfaa1894ce8e7ca6308d2d44b2 468 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 5 448 2.9E-82 T 14-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein TMO_c0121 716e4404a90bf17d120e1f09482db407 556 Gene3D G3DSA:3.60.40.10 260 525 2.5E-49 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TMO_c0121 716e4404a90bf17d120e1f09482db407 556 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 321 524 6.6E-21 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TMO_c0121 716e4404a90bf17d120e1f09482db407 556 SMART SM00331 295 525 5.9E-6 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TMO_c0121 716e4404a90bf17d120e1f09482db407 556 Pfam PF00672 HAMP domain 192 239 6.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_c0121 716e4404a90bf17d120e1f09482db407 556 SMART SM00304 192 243 4.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0205 69bf0d60e38d49986851e86f03053143 248 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 96 103 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_0205 69bf0d60e38d49986851e86f03053143 248 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 41 9.4E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_0205 69bf0d60e38d49986851e86f03053143 248 Pfam PF00484 Carbonic anhydrase 91 245 2.2E-35 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_0205 69bf0d60e38d49986851e86f03053143 248 Gene3D G3DSA:3.40.1050.10 44 248 3.3E-55 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 TMO_0205 69bf0d60e38d49986851e86f03053143 248 SMART SM00947 84 248 6.7E-47 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_0205 69bf0d60e38d49986851e86f03053143 248 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 133 153 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_0205 69bf0d60e38d49986851e86f03053143 248 SUPERFAMILY SSF53056 39 248 4.58E-51 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 TMO_1357 60348ee64044c30a0a6fc7fffe636bdd 490 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 436 2.1E-54 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 TMO_1357 60348ee64044c30a0a6fc7fffe636bdd 490 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 479 1.1E-133 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TMO_1357 60348ee64044c30a0a6fc7fffe636bdd 490 SUPERFAMILY SSF52540 1 237 2.82E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1357 60348ee64044c30a0a6fc7fffe636bdd 490 Gene3D G3DSA:3.40.50.880 253 396 1.7E-14 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1357 60348ee64044c30a0a6fc7fffe636bdd 490 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 237 1.3E-20 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TMO_1357 60348ee64044c30a0a6fc7fffe636bdd 490 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 487 196.846 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TMO_1357 60348ee64044c30a0a6fc7fffe636bdd 490 SUPERFAMILY SSF52317 253 444 8.25E-33 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1357 60348ee64044c30a0a6fc7fffe636bdd 490 Gene3D G3DSA:3.40.50.300 4 237 1.9E-51 T 14-10-2018 TMO_a0547 8528546141504a77e2ef2799d330ebf7 287 Gene3D G3DSA:3.40.50.300 98 172 1.9E-9 T 14-10-2018 TMO_a0547 8528546141504a77e2ef2799d330ebf7 287 SUPERFAMILY SSF53795 97 155 2.29E-13 T 14-10-2018 TMO_a0547 8528546141504a77e2ef2799d330ebf7 287 SUPERFAMILY SSF52540 113 284 5.65E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2937 363eb8fed9e0cb9cf3fba7011023a84e 109 Pfam PF02553 Cobalt transport protein component CbiN 5 73 9.0E-31 T 14-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 TMO_2937 363eb8fed9e0cb9cf3fba7011023a84e 109 TIGRFAM TIGR01165 cbiN: cobalt transport protein 2 88 4.0E-36 T 14-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 TMO_2937 363eb8fed9e0cb9cf3fba7011023a84e 109 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 109 45.65 T 14-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 TMO_c0448 132c7fd54114ae30b776b8e997fedb88 507 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 272 279 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_c0448 132c7fd54114ae30b776b8e997fedb88 507 Gene3D G3DSA:3.40.605.10 46 502 2.1E-157 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_c0448 132c7fd54114ae30b776b8e997fedb88 507 SUPERFAMILY SSF53720 31 505 1.96E-146 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_c0448 132c7fd54114ae30b776b8e997fedb88 507 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 301 312 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_c0448 132c7fd54114ae30b776b8e997fedb88 507 Gene3D G3DSA:3.40.309.10 278 472 2.1E-157 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_c0448 132c7fd54114ae30b776b8e997fedb88 507 Pfam PF00171 Aldehyde dehydrogenase family 45 502 4.7E-151 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_b0317 46b407662516ba35331102169a4f0e7b 236 Gene3D G3DSA:3.40.1080.10 1 225 3.6E-84 T 14-10-2018 TMO_b0317 46b407662516ba35331102169a4f0e7b 236 Pfam PF01144 Coenzyme A transferase 9 217 7.2E-70 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 TMO_b0317 46b407662516ba35331102169a4f0e7b 236 SMART SM00882 6 219 2.0E-78 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 TMO_b0317 46b407662516ba35331102169a4f0e7b 236 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 221 8.2E-107 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 TMO_b0317 46b407662516ba35331102169a4f0e7b 236 SUPERFAMILY SSF100950 2 224 3.35E-80 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_b0317 46b407662516ba35331102169a4f0e7b 236 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 TMO_2935 600fe18295d9ca2fedf0d73230f1739b 100 Pfam PF02361 Cobalt transport protein 2 66 5.3E-13 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TMO_2634 f763ac9e68df434d58434472cc5b0119 396 Gene3D G3DSA:3.40.50.300 1 205 6.6E-72 T 14-10-2018 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 SUPERFAMILY SSF50447 207 303 4.71E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_2634 f763ac9e68df434d58434472cc5b0119 396 Gene3D G3DSA:2.40.30.10 209 302 5.8E-39 T 14-10-2018 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 SUPERFAMILY SSF50465 300 395 1.18E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TMO_2634 f763ac9e68df434d58434472cc5b0119 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.1E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal TMO_2634 f763ac9e68df434d58434472cc5b0119 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 8.3E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site TMO_2634 f763ac9e68df434d58434472cc5b0119 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.556 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 4.8E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 Gene3D G3DSA:2.40.30.10 303 395 3.1E-42 T 14-10-2018 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.2E-229 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 7.1E-16 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_2634 f763ac9e68df434d58434472cc5b0119 396 SUPERFAMILY SSF52540 6 221 4.59E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0023 3592ebb6b74aaedbbe27f627e68f4386 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 251 7.2E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0023 3592ebb6b74aaedbbe27f627e68f4386 260 SUPERFAMILY SSF161098 60 241 3.53E-25 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0023 3592ebb6b74aaedbbe27f627e68f4386 260 Gene3D G3DSA:1.10.3720.10 55 254 3.0E-21 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2875 aa9ae19730790c893ab2b9a71aa9a1f9 349 Gene3D G3DSA:3.30.1330.60 182 347 1.7E-25 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_2875 aa9ae19730790c893ab2b9a71aa9a1f9 349 Pfam PF00691 OmpA family 245 330 1.2E-6 T 14-10-2018 IPR006665 OmpA-like domain TMO_2875 aa9ae19730790c893ab2b9a71aa9a1f9 349 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 64 4.7E-20 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain TMO_2875 aa9ae19730790c893ab2b9a71aa9a1f9 349 SUPERFAMILY SSF103088 238 341 3.4E-10 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_1255 179352bb72c1f32d952e41ae2bebf86e 300 Pfam PF03466 LysR substrate binding domain 88 293 2.5E-39 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1255 179352bb72c1f32d952e41ae2bebf86e 300 Gene3D G3DSA:3.40.190.290 91 298 4.3E-27 T 14-10-2018 TMO_1255 179352bb72c1f32d952e41ae2bebf86e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1255 179352bb72c1f32d952e41ae2bebf86e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1255 179352bb72c1f32d952e41ae2bebf86e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1255 179352bb72c1f32d952e41ae2bebf86e 300 SUPERFAMILY SSF53850 88 296 1.46E-37 T 14-10-2018 TMO_1255 179352bb72c1f32d952e41ae2bebf86e 300 Gene3D G3DSA:1.10.10.10 1 90 8.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1255 179352bb72c1f32d952e41ae2bebf86e 300 SUPERFAMILY SSF46785 1 111 1.65E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1255 179352bb72c1f32d952e41ae2bebf86e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.7E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 Gene3D G3DSA:1.10.4160.10 29 488 2.1E-14 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 Pfam PF00072 Response regulator receiver domain 957 1073 2.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 SUPERFAMILY SSF52172 955 1088 4.84E-31 T 14-10-2018 IPR011006 CheY-like superfamily TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 Pfam PF00512 His Kinase A (phospho-acceptor) domain 697 762 1.7E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 Gene3D G3DSA:3.40.50.12740 955 1174 1.1E-29 T 14-10-2018 TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 PRINTS PR00344 Bacterial sensor protein C-terminal signature 912 925 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 PRINTS PR00344 Bacterial sensor protein C-terminal signature 888 906 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 PRINTS PR00344 Bacterial sensor protein C-terminal signature 853 867 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 PRINTS PR00344 Bacterial sensor protein C-terminal signature 871 881 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 Gene3D G3DSA:3.30.565.10 761 929 1.1E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 SMART SM00388 696 762 1.1E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 817 925 6.4E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 SUPERFAMILY SSF47384 682 763 6.87E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 Gene3D G3DSA:1.10.287.130 660 760 7.8E-22 T 14-10-2018 TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 SMART SM00387 817 928 4.5E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 SUPERFAMILY SSF55874 752 924 1.26E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0470 86fdde937cd73fad5f6f702ed844a3c9 1194 SMART SM00448 955 1073 9.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0360 0e1ac809413d3e09d96df14511dcadc2 395 SUPERFAMILY SSF54506 176 384 5.49E-48 T 14-10-2018 TMO_c0360 0e1ac809413d3e09d96df14511dcadc2 395 Pfam PF04303 PrpF protein 6 382 2.2E-107 T 14-10-2018 IPR007400 PrpF protein TMO_c0360 0e1ac809413d3e09d96df14511dcadc2 395 Gene3D G3DSA:3.10.310.10 171 366 7.4E-129 T 14-10-2018 TMO_c0360 0e1ac809413d3e09d96df14511dcadc2 395 SUPERFAMILY SSF54506 4 171 2.75E-60 T 14-10-2018 TMO_c0360 0e1ac809413d3e09d96df14511dcadc2 395 Gene3D G3DSA:3.10.310.10 9 380 7.4E-129 T 14-10-2018 TMO_0864 0d71dbbb69ac70b9e0f293a95984d7d4 351 PRINTS PR00682 Isopenicillin N synthase signature 261 287 1.8E-14 T 14-10-2018 TMO_0864 0d71dbbb69ac70b9e0f293a95984d7d4 351 PRINTS PR00682 Isopenicillin N synthase signature 53 70 1.8E-14 T 14-10-2018 TMO_0864 0d71dbbb69ac70b9e0f293a95984d7d4 351 PRINTS PR00682 Isopenicillin N synthase signature 175 191 1.8E-14 T 14-10-2018 TMO_0864 0d71dbbb69ac70b9e0f293a95984d7d4 351 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 201 301 6.8E-21 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 TMO_0864 0d71dbbb69ac70b9e0f293a95984d7d4 351 SUPERFAMILY SSF51197 25 341 8.24E-99 T 14-10-2018 TMO_0864 0d71dbbb69ac70b9e0f293a95984d7d4 351 Gene3D G3DSA:2.60.120.330 19 345 2.2E-111 T 14-10-2018 IPR027443 Isopenicillin N synthase-like TMO_0864 0d71dbbb69ac70b9e0f293a95984d7d4 351 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 28 154 2.4E-36 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain TMO_b0397 a2dc321bd1a0a794f305bfe8957e4d61 222 Gene3D G3DSA:1.10.1760.20 1 209 1.0E-8 T 14-10-2018 TMO_b0397 a2dc321bd1a0a794f305bfe8957e4d61 222 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 209 5.3E-17 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 TMO_c0481 8350490bfc72fe4a414169a9ee81cdbb 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 4.7E-6 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_c0481 8350490bfc72fe4a414169a9ee81cdbb 41 SUPERFAMILY SSF57840 1 41 3.92E-12 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_c0481 8350490bfc72fe4a414169a9ee81cdbb 41 Pfam PF00444 Ribosomal protein L36 1 41 8.9E-16 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_c0481 8350490bfc72fe4a414169a9ee81cdbb 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.175 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2977 80981bb39f5fb6cdc78ba51a199fc52a 436 SUPERFAMILY SSF88713 167 384 1.67E-53 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_2977 80981bb39f5fb6cdc78ba51a199fc52a 436 Gene3D G3DSA:3.20.20.370 152 390 6.1E-79 T 14-10-2018 TMO_2977 80981bb39f5fb6cdc78ba51a199fc52a 436 Pfam PF04748 Divergent polysaccharide deacetylase 172 384 1.7E-59 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase TMO_c0817 77548b02d821f2135884317ca9dc558f 272 Pfam PF14339 Domain of unknown function (DUF4394) 48 269 4.8E-64 T 14-10-2018 IPR025507 Domain of unknown function DUF4394 TMO_c0817 77548b02d821f2135884317ca9dc558f 272 SUPERFAMILY SSF50969 40 270 1.1E-8 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TMO_c0817 77548b02d821f2135884317ca9dc558f 272 Gene3D G3DSA:2.130.10.10 8 163 5.8E-9 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TMO_3313 f0e7903773a064ec95bc7ec2c1e5c2fe 223 SUPERFAMILY SSF53474 3 222 1.05E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3313 f0e7903773a064ec95bc7ec2c1e5c2fe 223 Pfam PF02230 Phospholipase/Carboxylesterase 2 220 1.1E-20 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 TMO_3313 f0e7903773a064ec95bc7ec2c1e5c2fe 223 Gene3D G3DSA:3.40.50.1820 1 219 1.3E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2217 15017e243e01fb2348dcc9de42649343 195 Gene3D G3DSA:3.90.1680.10 83 195 1.7E-24 T 14-10-2018 IPR036590 SOS response associated peptidase-like TMO_2217 15017e243e01fb2348dcc9de42649343 195 Pfam PF02586 SOS response associated peptidase (SRAP) 86 194 1.3E-19 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) TMO_2217 15017e243e01fb2348dcc9de42649343 195 SUPERFAMILY SSF143081 2 194 6.8E-39 T 14-10-2018 IPR036590 SOS response associated peptidase-like TMO_2784 0f574adfc241e48f8a56f1cd936857fe 408 Gene3D G3DSA:3.40.50.2300 135 206 2.7E-6 T 14-10-2018 TMO_2784 0f574adfc241e48f8a56f1cd936857fe 408 Pfam PF04392 ABC transporter substrate binding protein 148 401 2.2E-19 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein TMO_2784 0f574adfc241e48f8a56f1cd936857fe 408 Gene3D G3DSA:3.40.50.2300 216 369 6.4E-22 T 14-10-2018 TMO_2694 0dff6cca125ce6474a998a55ed21df97 436 Gene3D G3DSA:3.40.50.2000 231 416 2.9E-73 T 14-10-2018 TMO_2694 0dff6cca125ce6474a998a55ed21df97 436 Gene3D G3DSA:3.40.50.2000 3 418 2.9E-73 T 14-10-2018 TMO_2694 0dff6cca125ce6474a998a55ed21df97 436 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 115 2.2E-7 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_2694 0dff6cca125ce6474a998a55ed21df97 436 SUPERFAMILY SSF53756 1 434 1.52E-68 T 14-10-2018 TMO_b0534 95add2d4af21caa6710216bc5ae8455c 212 Hamap MF_00401 Peroxiredoxin. 8 212 42.447 T 14-10-2018 IPR022915 Peroxiredoxin, TDXH subfamily GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_b0534 95add2d4af21caa6710216bc5ae8455c 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 197 4.1E-11 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_b0534 95add2d4af21caa6710216bc5ae8455c 212 PIRSF PIRSF000239 4 211 1.1E-72 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_b0534 95add2d4af21caa6710216bc5ae8455c 212 Pfam PF00578 AhpC/TSA family 11 139 7.8E-33 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_b0534 95add2d4af21caa6710216bc5ae8455c 212 SUPERFAMILY SSF52833 8 210 1.01E-65 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_b0534 95add2d4af21caa6710216bc5ae8455c 212 Gene3D G3DSA:3.30.1020.20 149 212 4.9E-19 T 14-10-2018 TMO_b0534 95add2d4af21caa6710216bc5ae8455c 212 Gene3D G3DSA:3.40.30.10 9 148 1.9E-45 T 14-10-2018 TMO_2584 1dcba35ebeafb7d86e213cf94ae48599 232 Gene3D G3DSA:3.40.50.880 2 230 1.8E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_2584 1dcba35ebeafb7d86e213cf94ae48599 232 Pfam PF01965 DJ-1/PfpI family 9 169 1.1E-26 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_2584 1dcba35ebeafb7d86e213cf94ae48599 232 SUPERFAMILY SSF52317 8 189 1.42E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_2726 bc0dcfb2fe8315267f219d1af3ad3667 281 Gene3D G3DSA:1.10.3720.10 67 275 1.5E-18 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2726 bc0dcfb2fe8315267f219d1af3ad3667 281 SUPERFAMILY SSF161098 74 262 3.01E-25 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2726 bc0dcfb2fe8315267f219d1af3ad3667 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 275 6.5E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0144 7d71b690374946f4d5c2cc785e0d5f15 273 SUPERFAMILY SSF161098 75 253 4.58E-27 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0144 7d71b690374946f4d5c2cc785e0d5f15 273 Gene3D G3DSA:1.10.3720.10 72 263 4.8E-23 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0144 7d71b690374946f4d5c2cc785e0d5f15 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 263 6.7E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_a0199 e5ceafe40ceab5701570d303ce1f822b 286 SUPERFAMILY SSF46689 184 235 5.73E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0199 e5ceafe40ceab5701570d303ce1f822b 286 SMART SM00342 201 283 2.8E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0199 e5ceafe40ceab5701570d303ce1f822b 286 SUPERFAMILY SSF46689 236 280 2.61E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0199 e5ceafe40ceab5701570d303ce1f822b 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 279 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_a0199 e5ceafe40ceab5701570d303ce1f822b 286 Gene3D G3DSA:1.10.10.60 185 286 3.2E-21 T 14-10-2018 TMO_a0199 e5ceafe40ceab5701570d303ce1f822b 286 Pfam PF12833 Helix-turn-helix domain 207 281 4.9E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0814 a41daabec81184e8f054295bc6cff85b 415 SUPERFAMILY SSF56601 41 413 7.25E-87 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_c0814 a41daabec81184e8f054295bc6cff85b 415 Pfam PF00144 Beta-lactamase 43 396 2.0E-63 T 14-10-2018 IPR001466 Beta-lactamase-related TMO_c0814 a41daabec81184e8f054295bc6cff85b 415 Gene3D G3DSA:3.40.710.10 24 415 3.8E-107 T 14-10-2018 TMO_1188 65abc41a6a6f3b209f1f91c536bc6197 377 Gene3D G3DSA:3.40.50.10140 2 130 1.7E-26 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TMO_1188 65abc41a6a6f3b209f1f91c536bc6197 377 SUPERFAMILY SSF52200 3 102 3.14E-24 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TMO_1188 65abc41a6a6f3b209f1f91c536bc6197 377 Pfam PF13676 TIR domain 4 103 2.3E-22 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_1188 65abc41a6a6f3b209f1f91c536bc6197 377 SMART SM00255 1 134 1.5E-7 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_0191 55ebc134a0329bb31ce25f4194b60d5e 526 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0191 55ebc134a0329bb31ce25f4194b60d5e 526 SUPERFAMILY SSF52540 19 219 2.71E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0191 55ebc134a0329bb31ce25f4194b60d5e 526 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0191 55ebc134a0329bb31ce25f4194b60d5e 526 Pfam PF00005 ABC transporter 357 482 2.6E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0191 55ebc134a0329bb31ce25f4194b60d5e 526 Pfam PF00005 ABC transporter 34 171 6.8E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0191 55ebc134a0329bb31ce25f4194b60d5e 526 Gene3D G3DSA:3.40.50.300 5 266 2.5E-45 T 14-10-2018 TMO_0191 55ebc134a0329bb31ce25f4194b60d5e 526 Gene3D G3DSA:3.40.50.300 335 520 6.0E-40 T 14-10-2018 TMO_0191 55ebc134a0329bb31ce25f4194b60d5e 526 SUPERFAMILY SSF52540 356 515 8.79E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0191 55ebc134a0329bb31ce25f4194b60d5e 526 SMART SM00382 361 522 2.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0191 55ebc134a0329bb31ce25f4194b60d5e 526 SMART SM00382 32 222 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2713 92b63f4b96811963f160cbafa4f4b6b9 138 SMART SM01234 51 118 2.8E-40 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TMO_2713 92b63f4b96811963f160cbafa4f4b6b9 138 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 66 118 3.0E-17 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TMO_2713 92b63f4b96811963f160cbafa4f4b6b9 138 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 55 121 3.8E-26 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TMO_2713 92b63f4b96811963f160cbafa4f4b6b9 138 Pfam PF01809 Haemolytic domain 54 118 1.4E-27 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TMO_2713 92b63f4b96811963f160cbafa4f4b6b9 138 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 51 119 23.39 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TMO_3417 544fb2d37a14fa74f99cd56213b0e0a0 242 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 53 211 6.3E-34 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TMO_3417 544fb2d37a14fa74f99cd56213b0e0a0 242 Pfam PF02527 rRNA small subunit methyltransferase G 51 220 6.1E-39 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TMO_3417 544fb2d37a14fa74f99cd56213b0e0a0 242 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 42 235 24.071 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TMO_3417 544fb2d37a14fa74f99cd56213b0e0a0 242 SUPERFAMILY SSF53335 39 211 3.87E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_3417 544fb2d37a14fa74f99cd56213b0e0a0 242 Gene3D G3DSA:3.40.50.150 28 227 1.5E-52 T 14-10-2018 TMO_1088 3d0c54d1c9d17f72bdc4d539cfea981a 603 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 8 343 1.3E-72 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TMO_1088 3d0c54d1c9d17f72bdc4d539cfea981a 603 PRINTS PR01005 Flagellar hook-associated protein signature 15 38 1.3E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TMO_1088 3d0c54d1c9d17f72bdc4d539cfea981a 603 PRINTS PR01005 Flagellar hook-associated protein signature 567 591 1.3E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TMO_1088 3d0c54d1c9d17f72bdc4d539cfea981a 603 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 560 600 1.8E-11 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TMO_1088 3d0c54d1c9d17f72bdc4d539cfea981a 603 Pfam PF00460 Flagella basal body rod protein 9 39 6.2E-8 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TMO_1088 3d0c54d1c9d17f72bdc4d539cfea981a 603 Pfam PF07196 Flagellin hook IN motif 359 415 4.1E-6 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TMO_1088 3d0c54d1c9d17f72bdc4d539cfea981a 603 SUPERFAMILY SSF64518 144 599 9.15E-9 T 14-10-2018 TMO_1388 f343c5591ff435a448295511d4b2686d 266 Gene3D G3DSA:1.10.3470.10 31 261 1.1E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1388 f343c5591ff435a448295511d4b2686d 266 SUPERFAMILY SSF81345 2 253 2.09E-35 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1388 f343c5591ff435a448295511d4b2686d 266 Pfam PF00950 ABC 3 transport family 5 254 3.5E-68 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TMO_1064 0cbdf5eadbf0377b0e063a17d46c8bb3 476 SUPERFAMILY SSF56954 62 460 3.79E-53 T 14-10-2018 TMO_1064 0cbdf5eadbf0377b0e063a17d46c8bb3 476 Pfam PF02321 Outer membrane efflux protein 287 449 1.2E-14 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_1064 0cbdf5eadbf0377b0e063a17d46c8bb3 476 Pfam PF02321 Outer membrane efflux protein 73 255 7.3E-15 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_1064 0cbdf5eadbf0377b0e063a17d46c8bb3 476 Gene3D G3DSA:1.20.1600.10 71 464 4.8E-54 T 14-10-2018 TMO_c0317 0fb4bd8b8dc67e01db9f04ba05721b24 128 Gene3D G3DSA:3.40.50.1010 1 122 1.3E-33 T 14-10-2018 TMO_c0317 0fb4bd8b8dc67e01db9f04ba05721b24 128 Pfam PF01850 PIN domain 2 117 3.2E-7 T 14-10-2018 IPR002716 PIN domain TMO_c0317 0fb4bd8b8dc67e01db9f04ba05721b24 128 SUPERFAMILY SSF88723 3 123 3.68E-9 T 14-10-2018 IPR029060 PIN-like domain superfamily TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 PRINTS PR00143 Citrate synthase signature 324 338 3.0E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 PRINTS PR00143 Citrate synthase signature 119 132 3.0E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 PRINTS PR00143 Citrate synthase signature 168 183 3.0E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 PRINTS PR00143 Citrate synthase signature 190 218 3.0E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 PRINTS PR00143 Citrate synthase signature 304 320 3.0E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 PRINTS PR00143 Citrate synthase signature 243 263 3.0E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 Pfam PF00285 Citrate synthase, C-terminal domain 6 353 2.2E-115 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 ProSitePatterns PS00480 Citrate synthase signature. 250 262 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 SUPERFAMILY SSF48256 3 363 1.01E-119 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 Gene3D G3DSA:1.10.580.10 17 344 4.2E-125 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 PIRSF PIRSF001369 1 365 4.0E-122 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type TMO_0010 5da4246f3e131e43d5c4449b8dd38894 365 Gene3D G3DSA:1.10.230.10 216 318 4.2E-125 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain TMO_0174 931859ed63db663aeb2aa09dffbd5cf6 153 SUPERFAMILY SSF53795 6 125 1.22E-17 T 14-10-2018 TMO_0174 931859ed63db663aeb2aa09dffbd5cf6 153 Gene3D G3DSA:3.40.50.300 2 152 2.3E-32 T 14-10-2018 TMO_0174 931859ed63db663aeb2aa09dffbd5cf6 153 Pfam PF07475 HPr Serine kinase C-terminal domain 5 83 3.1E-18 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 TMO_0312 71db6c43938ef837aa8a60a0a24f59fa 272 SUPERFAMILY SSF64438 16 270 1.3E-69 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic TMO_0312 71db6c43938ef837aa8a60a0a24f59fa 272 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 38 270 1.7E-44 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase TMO_0312 71db6c43938ef837aa8a60a0a24f59fa 272 Gene3D G3DSA:3.60.140.10 11 272 3.1E-76 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily TMO_0312 71db6c43938ef837aa8a60a0a24f59fa 272 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 29 268 7.3E-63 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase TMO_c0837 b57046e2a110e27a9fc446185e840f5f 594 Gene3D G3DSA:3.40.50.300 381 587 2.9E-41 T 14-10-2018 TMO_c0837 b57046e2a110e27a9fc446185e840f5f 594 Pfam PF06472 ABC transporter transmembrane region 2 26 313 8.7E-40 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_c0837 b57046e2a110e27a9fc446185e840f5f 594 SUPERFAMILY SSF90123 46 359 1.83E-13 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_c0837 b57046e2a110e27a9fc446185e840f5f 594 SUPERFAMILY SSF52540 381 582 3.34E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0837 b57046e2a110e27a9fc446185e840f5f 594 SMART SM00382 410 586 4.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0837 b57046e2a110e27a9fc446185e840f5f 594 ProSitePatterns PS00211 ABC transporters family signature. 511 525 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0837 b57046e2a110e27a9fc446185e840f5f 594 Pfam PF00005 ABC transporter 403 539 9.0E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2778 b18741490979890f3e08bb3e91d3e9f8 134 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 42 93 1.5E-15 T 14-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter TMO_c0905 88d3212b030d59ed547e449796eb6ec4 301 Gene3D G3DSA:1.10.760.10 177 296 1.0E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0905 88d3212b030d59ed547e449796eb6ec4 301 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 208 289 2.2E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_c0905 88d3212b030d59ed547e449796eb6ec4 301 SUPERFAMILY SSF46626 184 298 2.7E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_1461 5d392313d0fddef21e2c61c1ba31ae87 245 SUPERFAMILY SSF56281 11 241 3.55E-13 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_0029 ce4d3ab6c1e1bb98f96910057413f7cd 145 SUPERFAMILY SSF53671 1 140 1.12E-47 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TMO_0029 ce4d3ab6c1e1bb98f96910057413f7cd 145 Gene3D G3DSA:3.40.50.1370 2 126 1.3E-46 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TMO_0029 ce4d3ab6c1e1bb98f96910057413f7cd 145 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 129 5.8E-5 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TMO_0029 ce4d3ab6c1e1bb98f96910057413f7cd 145 PRINTS PR00102 Ornithine carbamoyltransferase signature 57 67 5.8E-5 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TMO_0029 ce4d3ab6c1e1bb98f96910057413f7cd 145 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 104 127 5.0E-11 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_0029 ce4d3ab6c1e1bb98f96910057413f7cd 145 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 92 101 5.0E-11 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_0029 ce4d3ab6c1e1bb98f96910057413f7cd 145 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 2 137 4.2E-43 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TMO_0782 08cdf7125e558ac8d894bbbea058cb22 195 Pfam PF03923 Uncharacterized lipoprotein 35 191 1.9E-34 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG TMO_c0689 a6fbce1c8f6e8ba34c5a239940004728 144 Gene3D G3DSA:3.40.50.1010 1 132 1.2E-25 T 14-10-2018 TMO_c0689 a6fbce1c8f6e8ba34c5a239940004728 144 Pfam PF01850 PIN domain 4 127 4.6E-10 T 14-10-2018 IPR002716 PIN domain TMO_c0689 a6fbce1c8f6e8ba34c5a239940004728 144 SUPERFAMILY SSF88723 3 135 2.61E-19 T 14-10-2018 IPR029060 PIN-like domain superfamily TMO_2687 be81f2a8eebf0826e52199868a479fd1 107 Gene3D G3DSA:3.30.1310.10 1 107 6.4E-40 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily TMO_2687 be81f2a8eebf0826e52199868a479fd1 107 Pfam PF02575 YbaB/EbfC DNA-binding family 8 98 1.3E-36 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TMO_2687 be81f2a8eebf0826e52199868a479fd1 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 23.201 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TMO_2687 be81f2a8eebf0826e52199868a479fd1 107 PIRSF PIRSF004555 1 106 8.8E-40 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TMO_2687 be81f2a8eebf0826e52199868a479fd1 107 SUPERFAMILY SSF82607 8 102 8.24E-35 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily TMO_2687 be81f2a8eebf0826e52199868a479fd1 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 102 8.8E-30 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TMO_0207 6113e732c508aa0ff0c228619b295226 193 Pfam PF00583 Acetyltransferase (GNAT) family 71 159 1.8E-8 T 14-10-2018 IPR000182 GNAT domain TMO_0207 6113e732c508aa0ff0c228619b295226 193 Gene3D G3DSA:3.40.630.30 19 167 8.8E-21 T 14-10-2018 TMO_0207 6113e732c508aa0ff0c228619b295226 193 SUPERFAMILY SSF55729 13 162 1.17E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_c0698 d6d18ba040b61c849f0ab335c99eab2c 226 Gene3D G3DSA:3.40.630.30 5 190 6.7E-44 T 14-10-2018 TMO_c0698 d6d18ba040b61c849f0ab335c99eab2c 226 PRINTS PR01549 Autoinducer synthesis protein signature 96 108 3.5E-8 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 TMO_c0698 d6d18ba040b61c849f0ab335c99eab2c 226 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 3.5E-8 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 TMO_c0698 d6d18ba040b61c849f0ab335c99eab2c 226 PRINTS PR01549 Autoinducer synthesis protein signature 63 81 3.5E-8 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 TMO_c0698 d6d18ba040b61c849f0ab335c99eab2c 226 PRINTS PR01549 Autoinducer synthesis protein signature 40 62 3.5E-8 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 TMO_c0698 d6d18ba040b61c849f0ab335c99eab2c 226 SUPERFAMILY SSF55729 1 184 5.88E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_c0698 d6d18ba040b61c849f0ab335c99eab2c 226 Pfam PF00765 Autoinducer synthase 12 178 1.8E-16 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 TMO_3095 d3c8e8053b5e210c81d4d1108a8f7eb2 235 SUPERFAMILY SSF52540 2 233 1.41E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3095 d3c8e8053b5e210c81d4d1108a8f7eb2 235 Gene3D G3DSA:3.40.50.300 1 235 3.1E-66 T 14-10-2018 TMO_3095 d3c8e8053b5e210c81d4d1108a8f7eb2 235 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3095 d3c8e8053b5e210c81d4d1108a8f7eb2 235 Pfam PF00005 ABC transporter 17 163 7.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3095 d3c8e8053b5e210c81d4d1108a8f7eb2 235 SMART SM00382 26 214 3.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3373 740aec5b81466d3395e81844890aecef 692 Gene3D G3DSA:2.40.170.20 177 692 8.9E-118 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_3373 740aec5b81466d3395e81844890aecef 692 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 171 8.9E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_3373 740aec5b81466d3395e81844890aecef 692 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 56 692 3.6E-101 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 TMO_3373 740aec5b81466d3395e81844890aecef 692 SUPERFAMILY SSF56935 55 692 3.23E-110 T 14-10-2018 TMO_3373 740aec5b81466d3395e81844890aecef 692 Gene3D G3DSA:2.170.130.10 54 176 6.9E-27 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_3373 740aec5b81466d3395e81844890aecef 692 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 54 692 7.6E-132 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 TMO_3373 740aec5b81466d3395e81844890aecef 692 Pfam PF00593 TonB dependent receptor 263 690 7.3E-58 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_1957 6bc3fbaf79f624126c32bf08ebe768a4 337 Gene3D G3DSA:3.90.180.10 15 331 6.8E-100 T 14-10-2018 TMO_1957 6bc3fbaf79f624126c32bf08ebe768a4 337 Gene3D G3DSA:3.40.50.720 132 302 6.8E-100 T 14-10-2018 TMO_1957 6bc3fbaf79f624126c32bf08ebe768a4 337 SUPERFAMILY SSF51735 124 303 7.33E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1957 6bc3fbaf79f624126c32bf08ebe768a4 337 SMART SM00829 17 333 6.3E-41 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_1957 6bc3fbaf79f624126c32bf08ebe768a4 337 SUPERFAMILY SSF50129 4 156 5.17E-42 T 14-10-2018 IPR011032 GroES-like superfamily TMO_1957 6bc3fbaf79f624126c32bf08ebe768a4 337 Pfam PF00107 Zinc-binding dehydrogenase 163 251 4.2E-25 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_1957 6bc3fbaf79f624126c32bf08ebe768a4 337 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 152 173 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 TMO_1957 6bc3fbaf79f624126c32bf08ebe768a4 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 96 3.0E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_c0266 d81df8ed34909f70fc9d198a40d8a6d1 652 Gene3D G3DSA:1.10.189.10 24 212 9.5E-6 T 14-10-2018 TMO_c0266 d81df8ed34909f70fc9d198a40d8a6d1 652 SUPERFAMILY SSF51621 308 640 1.46E-27 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_c0266 d81df8ed34909f70fc9d198a40d8a6d1 652 Gene3D G3DSA:3.50.30.10 45 195 9.5E-6 T 14-10-2018 TMO_c0266 d81df8ed34909f70fc9d198a40d8a6d1 652 Gene3D G3DSA:3.20.20.60 302 644 7.4E-54 T 14-10-2018 TMO_c0266 d81df8ed34909f70fc9d198a40d8a6d1 652 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 306 635 6.5E-15 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TMO_2720 8aa0925eb3a6302ad15edca198114abd 485 SMART SM00387 372 485 2.1E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2720 8aa0925eb3a6302ad15edca198114abd 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 2.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2720 8aa0925eb3a6302ad15edca198114abd 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 2.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2720 8aa0925eb3a6302ad15edca198114abd 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 2.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2720 8aa0925eb3a6302ad15edca198114abd 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 444 2.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2720 8aa0925eb3a6302ad15edca198114abd 485 SUPERFAMILY SSF55874 322 484 4.19E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2720 8aa0925eb3a6302ad15edca198114abd 485 Gene3D G3DSA:3.30.565.10 319 485 4.2E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2720 8aa0925eb3a6302ad15edca198114abd 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 484 6.8E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2720 8aa0925eb3a6302ad15edca198114abd 485 Gene3D G3DSA:1.10.287.130 189 311 1.2E-8 T 14-10-2018 TMO_1051 a2ac598542c8a4dc704a42b4d46bc460 419 Gene3D G3DSA:1.20.1250.20 219 409 1.3E-18 T 14-10-2018 TMO_1051 a2ac598542c8a4dc704a42b4d46bc460 419 Gene3D G3DSA:1.20.1250.20 20 206 9.4E-16 T 14-10-2018 TMO_1051 a2ac598542c8a4dc704a42b4d46bc460 419 SUPERFAMILY SSF103473 20 408 1.31E-50 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_1051 a2ac598542c8a4dc704a42b4d46bc460 419 Pfam PF07690 Major Facilitator Superfamily 33 369 1.0E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0327 2f0098ba3909fe7e037c718d00ff8bc5 114 Pfam PF05899 Protein of unknown function (DUF861) 44 110 2.5E-18 T 14-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 TMO_c0327 2f0098ba3909fe7e037c718d00ff8bc5 114 SUPERFAMILY SSF51182 14 111 1.19E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0327 2f0098ba3909fe7e037c718d00ff8bc5 114 Gene3D G3DSA:2.60.120.10 8 114 2.8E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_2073 137ad558f2f27d420c8a0ef4117e6b52 476 Pfam PF12801 4Fe-4S binding domain 149 184 0.0036 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_2073 137ad558f2f27d420c8a0ef4117e6b52 476 Pfam PF12801 4Fe-4S binding domain 65 106 9.5E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_2073 137ad558f2f27d420c8a0ef4117e6b52 476 SUPERFAMILY SSF54862 167 238 1.42E-8 T 14-10-2018 TMO_a0550 3a71db1355e5274d1f7cd5082ad8b57f 450 Pfam PF07690 Major Facilitator Superfamily 30 322 1.8E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_a0550 3a71db1355e5274d1f7cd5082ad8b57f 450 Gene3D G3DSA:1.20.1250.20 20 434 2.5E-64 T 14-10-2018 TMO_a0550 3a71db1355e5274d1f7cd5082ad8b57f 450 SUPERFAMILY SSF103473 11 436 4.84E-77 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_a0550 3a71db1355e5274d1f7cd5082ad8b57f 450 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TMO_a0550 3a71db1355e5274d1f7cd5082ad8b57f 450 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TMO_2415 4ed538c0b4fa519f88273aecdd192e18 305 SUPERFAMILY SSF51621 5 295 1.35E-94 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_2415 4ed538c0b4fa519f88273aecdd192e18 305 Gene3D G3DSA:3.20.20.60 2 302 4.3E-103 T 14-10-2018 TMO_2415 4ed538c0b4fa519f88273aecdd192e18 305 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 TMO_2415 4ed538c0b4fa519f88273aecdd192e18 305 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 12 297 46.61 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 TMO_2415 4ed538c0b4fa519f88273aecdd192e18 305 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 256 6.2E-51 T 14-10-2018 TMO_2415 4ed538c0b4fa519f88273aecdd192e18 305 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 15 296 4.0E-124 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 TMO_1334 934f99f2b9c4277b7ff08102d4ea039c 382 SUPERFAMILY SSF81345 23 374 5.75E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1334 934f99f2b9c4277b7ff08102d4ea039c 382 Pfam PF01032 FecCD transport family 40 374 9.8E-81 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_1334 934f99f2b9c4277b7ff08102d4ea039c 382 Gene3D G3DSA:1.10.3470.10 23 379 2.0E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1807 1a1f59f6f6e503bbbafa2307b2c67296 239 SMART SM00073 22 121 7.7E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TMO_1807 1a1f59f6f6e503bbbafa2307b2c67296 239 Pfam PF03091 CutA1 divalent ion tolerance protein 139 235 2.7E-31 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 TMO_1807 1a1f59f6f6e503bbbafa2307b2c67296 239 SUPERFAMILY SSF54913 136 238 1.07E-32 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TMO_1807 1a1f59f6f6e503bbbafa2307b2c67296 239 Gene3D G3DSA:3.30.70.120 133 239 1.4E-34 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TMO_1807 1a1f59f6f6e503bbbafa2307b2c67296 239 Pfam PF01627 Hpt domain 26 110 7.1E-14 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TMO_1807 1a1f59f6f6e503bbbafa2307b2c67296 239 SUPERFAMILY SSF47226 24 107 8.64E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_1807 1a1f59f6f6e503bbbafa2307b2c67296 239 Gene3D G3DSA:1.20.120.160 13 118 5.3E-12 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_1205 bbd92ab2d63cec531471d82392ae6b24 153 Pfam PF00501 AMP-binding enzyme 15 125 2.2E-13 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_1205 bbd92ab2d63cec531471d82392ae6b24 153 SUPERFAMILY SSF56801 5 139 1.83E-19 T 14-10-2018 TMO_1205 bbd92ab2d63cec531471d82392ae6b24 153 Gene3D G3DSA:3.40.50.980 4 149 4.7E-18 T 14-10-2018 TMO_2219 d4dc6d7da0893843c71cac7221f1fdd8 379 Gene3D G3DSA:3.40.1360.10 229 329 4.6E-5 T 14-10-2018 TMO_2219 d4dc6d7da0893843c71cac7221f1fdd8 379 Pfam PF13362 Toprim domain 231 320 8.0E-24 T 14-10-2018 IPR006171 TOPRIM domain TMO_c0381 02115ceae0a83bc3f8656336b5183cb1 235 SUPERFAMILY SSF48498 95 217 5.09E-42 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_c0381 02115ceae0a83bc3f8656336b5183cb1 235 SUPERFAMILY SSF46689 18 97 1.7E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0381 02115ceae0a83bc3f8656336b5183cb1 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 3.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0381 02115ceae0a83bc3f8656336b5183cb1 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 3.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0381 02115ceae0a83bc3f8656336b5183cb1 235 Gene3D G3DSA:1.10.10.60 10 76 2.5E-19 T 14-10-2018 TMO_c0381 02115ceae0a83bc3f8656336b5183cb1 235 Gene3D G3DSA:1.10.357.10 77 218 4.8E-51 T 14-10-2018 TMO_c0381 02115ceae0a83bc3f8656336b5183cb1 235 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 76 1.8E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0381 02115ceae0a83bc3f8656336b5183cb1 235 Pfam PF08362 YcdC-like protein, C-terminal region 77 217 1.2E-54 T 14-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 TMO_0013 8749443f6f6e7b9b8d0bc2e47318ad02 401 Gene3D G3DSA:1.10.238.260 283 392 6.6E-22 T 14-10-2018 TMO_0013 8749443f6f6e7b9b8d0bc2e47318ad02 401 Pfam PF00682 HMGL-like 19 273 4.3E-21 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_0013 8749443f6f6e7b9b8d0bc2e47318ad02 401 SUPERFAMILY SSF51569 16 296 1.81E-30 T 14-10-2018 TMO_0013 8749443f6f6e7b9b8d0bc2e47318ad02 401 Gene3D G3DSA:3.20.20.70 14 279 1.0E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_0198 075483eb32db991c51f959a0b3a4823f 359 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 8.0E-24 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TMO_0198 075483eb32db991c51f959a0b3a4823f 359 SUPERFAMILY SSF55681 92 344 1.7E-80 T 14-10-2018 TMO_0198 075483eb32db991c51f959a0b3a4823f 359 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 342 4.4E-104 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TMO_0198 075483eb32db991c51f959a0b3a4823f 359 SUPERFAMILY SSF46589 15 99 1.15E-20 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TMO_0198 075483eb32db991c51f959a0b3a4823f 359 Gene3D G3DSA:3.30.930.10 7 345 2.9E-120 T 14-10-2018 TMO_0198 075483eb32db991c51f959a0b3a4823f 359 Pfam PF01409 tRNA synthetases class II core domain (F) 92 342 4.5E-105 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 TMO_0198 075483eb32db991c51f959a0b3a4823f 359 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 343 47.28 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 TMO_3191 b4c9ad23ad0335bc2efb25e8af0800c9 244 SUPERFAMILY SSF53448 1 240 4.73E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_3191 b4c9ad23ad0335bc2efb25e8af0800c9 244 Gene3D G3DSA:3.90.550.10 1 241 1.9E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_3191 b4c9ad23ad0335bc2efb25e8af0800c9 244 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 3 234 3.0E-47 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 TMO_3191 b4c9ad23ad0335bc2efb25e8af0800c9 244 Pfam PF02348 Cytidylyltransferase 5 215 2.3E-35 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 TMO_1775 4480e38f7cac2cad42aca5782ebbf24a 385 Pfam PF13180 PDZ domain 148 212 1.3E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_1775 4480e38f7cac2cad42aca5782ebbf24a 385 SMART SM00228 127 206 2.9E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_1775 4480e38f7cac2cad42aca5782ebbf24a 385 SUPERFAMILY SSF50156 120 215 8.68E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 TMO_1775 4480e38f7cac2cad42aca5782ebbf24a 385 Gene3D G3DSA:2.30.42.10 148 240 3.1E-21 T 14-10-2018 TMO_1775 4480e38f7cac2cad42aca5782ebbf24a 385 Pfam PF02163 Peptidase family M50 24 362 1.0E-77 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 TMO_1775 4480e38f7cac2cad42aca5782ebbf24a 385 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 150 374 4.3E-51 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 TMO_2068 a1ddece54463e0acb2c5661dc58fca7d 483 Gene3D G3DSA:1.20.1250.20 217 419 2.1E-8 T 14-10-2018 TMO_2068 a1ddece54463e0acb2c5661dc58fca7d 483 Gene3D G3DSA:1.20.1250.20 12 208 1.6E-8 T 14-10-2018 TMO_2068 a1ddece54463e0acb2c5661dc58fca7d 483 SUPERFAMILY SSF103473 32 392 3.53E-26 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2068 a1ddece54463e0acb2c5661dc58fca7d 483 Pfam PF13347 MFS/sugar transport protein 18 432 2.0E-76 T 14-10-2018 TMO_b0220 b0086d86cc9c21f9d487892c716f616e 259 Pfam PF00005 ABC transporter 21 170 2.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0220 b0086d86cc9c21f9d487892c716f616e 259 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0220 b0086d86cc9c21f9d487892c716f616e 259 Gene3D G3DSA:3.40.50.300 5 254 4.1E-69 T 14-10-2018 TMO_b0220 b0086d86cc9c21f9d487892c716f616e 259 SUPERFAMILY SSF52540 4 231 3.13E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0220 b0086d86cc9c21f9d487892c716f616e 259 SMART SM00382 30 218 1.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0849 78df9d46226c7816fbc6d9c163c9579e 707 Pfam PF13245 AAA domain 39 199 1.4E-13 T 14-10-2018 TMO_0849 78df9d46226c7816fbc6d9c163c9579e 707 SUPERFAMILY SSF52540 184 500 1.42E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0849 78df9d46226c7816fbc6d9c163c9579e 707 Gene3D G3DSA:3.40.50.300 5 248 3.8E-29 T 14-10-2018 TMO_0849 78df9d46226c7816fbc6d9c163c9579e 707 SUPERFAMILY SSF52540 13 203 3.73E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0849 78df9d46226c7816fbc6d9c163c9579e 707 Pfam PF13538 UvrD-like helicase C-terminal domain 440 490 7.5E-16 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain TMO_0849 78df9d46226c7816fbc6d9c163c9579e 707 Gene3D G3DSA:3.40.50.300 419 498 1.4E-12 T 14-10-2018 TMO_c0420 6f75930dd7c236aaa0e2cb0d9314780e 503 Pfam PF07690 Major Facilitator Superfamily 20 409 8.3E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0420 6f75930dd7c236aaa0e2cb0d9314780e 503 SUPERFAMILY SSF103473 6 498 3.14E-52 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0420 6f75930dd7c236aaa0e2cb0d9314780e 503 Gene3D G3DSA:1.20.1720.10 15 249 4.8E-41 T 14-10-2018 TMO_c0420 6f75930dd7c236aaa0e2cb0d9314780e 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 7.6E-7 T 14-10-2018 TMO_c0420 6f75930dd7c236aaa0e2cb0d9314780e 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 7.6E-7 T 14-10-2018 TMO_c0420 6f75930dd7c236aaa0e2cb0d9314780e 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 7.6E-7 T 14-10-2018 TMO_2869 65c648c64405d8325a540b536631a816 301 SMART SM00342 175 257 2.8E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2869 65c648c64405d8325a540b536631a816 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 257 2.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_2869 65c648c64405d8325a540b536631a816 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 241 2.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_2869 65c648c64405d8325a540b536631a816 301 Gene3D G3DSA:1.10.10.60 159 261 1.7E-20 T 14-10-2018 TMO_2869 65c648c64405d8325a540b536631a816 301 Gene3D G3DSA:2.60.120.10 22 92 3.3E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_2869 65c648c64405d8325a540b536631a816 301 Pfam PF12833 Helix-turn-helix domain 183 257 5.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2869 65c648c64405d8325a540b536631a816 301 SUPERFAMILY SSF51182 22 184 3.45E-20 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_2869 65c648c64405d8325a540b536631a816 301 SUPERFAMILY SSF46689 214 256 4.39E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2869 65c648c64405d8325a540b536631a816 301 Pfam PF07883 Cupin domain 30 82 6.0E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_a0385 db3b4cd3688673099aacc0f977fb81a5 562 Gene3D G3DSA:3.30.300.310 445 549 8.4E-23 T 14-10-2018 TMO_a0385 db3b4cd3688673099aacc0f977fb81a5 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 458 535 1.3E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0385 db3b4cd3688673099aacc0f977fb81a5 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 205 216 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_a0385 db3b4cd3688673099aacc0f977fb81a5 562 SUPERFAMILY SSF56801 30 554 6.93E-106 T 14-10-2018 TMO_a0385 db3b4cd3688673099aacc0f977fb81a5 562 Pfam PF00501 AMP-binding enzyme 38 448 1.1E-60 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0385 db3b4cd3688673099aacc0f977fb81a5 562 Gene3D G3DSA:3.40.50.12780 10 444 8.5E-87 T 14-10-2018 TMO_c0248 4b7b8b2f3e5805275edf52d4e555360a 155 ProDom PD201674 DIVISION CELL RP568 MEMBRANE TRANSMEMBRANE FTSL 3 83 1.0E-6 T 14-10-2018 TMO_c0651 b79dfc3c1af705508d611ccb306a0767 387 Gene3D G3DSA:3.50.50.60 107 140 2.1E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0651 b79dfc3c1af705508d611ccb306a0767 387 SUPERFAMILY SSF51905 11 225 7.77E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0651 b79dfc3c1af705508d611ccb306a0767 387 Gene3D G3DSA:3.50.50.60 141 211 2.1E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0425 32ec92c9f3d1ccc29f593184cf93b688 444 Pfam PF00202 Aminotransferase class-III 27 422 9.2E-95 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_0425 32ec92c9f3d1ccc29f593184cf93b688 444 SUPERFAMILY SSF53383 14 423 3.35E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_0425 32ec92c9f3d1ccc29f593184cf93b688 444 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 423 1.1E-152 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 TMO_0425 32ec92c9f3d1ccc29f593184cf93b688 444 Gene3D G3DSA:3.40.640.10 63 326 3.3E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0425 32ec92c9f3d1ccc29f593184cf93b688 444 Gene3D G3DSA:3.90.1150.10 15 416 3.3E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_0979 213b6f47a2c7e6370e0dee86cf08295c 386 Gene3D G3DSA:1.20.140.10 243 386 1.5E-44 T 14-10-2018 TMO_0979 213b6f47a2c7e6370e0dee86cf08295c 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 132 144 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_0979 213b6f47a2c7e6370e0dee86cf08295c 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 224 3.9E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_0979 213b6f47a2c7e6370e0dee86cf08295c 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_0979 213b6f47a2c7e6370e0dee86cf08295c 386 Gene3D G3DSA:2.40.110.10 129 242 5.1E-38 T 14-10-2018 TMO_0979 213b6f47a2c7e6370e0dee86cf08295c 386 SUPERFAMILY SSF47203 237 386 6.44E-47 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_0979 213b6f47a2c7e6370e0dee86cf08295c 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 126 9.4E-31 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_0979 213b6f47a2c7e6370e0dee86cf08295c 386 Gene3D G3DSA:1.10.540.10 5 128 9.0E-35 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_0979 213b6f47a2c7e6370e0dee86cf08295c 386 SUPERFAMILY SSF56645 9 250 8.77E-77 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_0979 213b6f47a2c7e6370e0dee86cf08295c 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 386 2.5E-42 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_c0312 fbe27af67a70c2d099af0e193e25eab9 378 SUPERFAMILY SSF53187 1 371 1.37E-87 T 14-10-2018 TMO_c0312 fbe27af67a70c2d099af0e193e25eab9 378 Pfam PF01546 Peptidase family M20/M25/M40 59 371 1.0E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 TMO_c0312 fbe27af67a70c2d099af0e193e25eab9 378 PIRSF PIRSF005962 1 375 1.7E-124 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 TMO_c0312 fbe27af67a70c2d099af0e193e25eab9 378 Gene3D G3DSA:3.40.630.10 1 359 8.9E-136 T 14-10-2018 TMO_c0312 fbe27af67a70c2d099af0e193e25eab9 378 Pfam PF07687 Peptidase dimerisation domain 172 268 3.1E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain TMO_c0312 fbe27af67a70c2d099af0e193e25eab9 378 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 1 359 1.3E-106 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 TMO_c0312 fbe27af67a70c2d099af0e193e25eab9 378 Gene3D G3DSA:3.30.70.360 167 281 8.9E-136 T 14-10-2018 TMO_c0312 fbe27af67a70c2d099af0e193e25eab9 378 SUPERFAMILY SSF55031 169 282 1.05E-29 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TMO_2927 565a61ddddbd4ed619c17bd4d0a7893d 610 Pfam PF07730 Histidine kinase 421 471 1.5E-4 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 TMO_2927 565a61ddddbd4ed619c17bd4d0a7893d 610 Gene3D G3DSA:3.30.565.10 484 605 3.4E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2927 565a61ddddbd4ed619c17bd4d0a7893d 610 SMART SM00387 516 607 2.7E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2927 565a61ddddbd4ed619c17bd4d0a7893d 610 SUPERFAMILY SSF55874 475 604 1.81E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0551 7cdcaef9affb6457a2fbdd4eef67f315 710 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 7 177 6.6E-46 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_b0551 7cdcaef9affb6457a2fbdd4eef67f315 710 Pfam PF01968 Hydantoinase/oxoprolinase 200 489 1.7E-93 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_0204 bb7511fa09216a2e4edd29128903ba04 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 1.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0204 bb7511fa09216a2e4edd29128903ba04 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 1.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0204 bb7511fa09216a2e4edd29128903ba04 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 1.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0204 bb7511fa09216a2e4edd29128903ba04 110 SMART SM00418 10 92 1.4E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0204 bb7511fa09216a2e4edd29128903ba04 110 Gene3D G3DSA:1.10.10.10 3 96 2.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0204 bb7511fa09216a2e4edd29128903ba04 110 SUPERFAMILY SSF46785 3 97 9.6E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0204 bb7511fa09216a2e4edd29128903ba04 110 Pfam PF12840 Helix-turn-helix domain 11 72 4.8E-13 T 14-10-2018 TMO_2423 de337c0438d8df9ca32f182c6ec0a432 208 SUPERFAMILY SSF46689 10 90 3.03E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2423 de337c0438d8df9ca32f182c6ec0a432 208 Gene3D G3DSA:1.10.357.10 7 203 2.7E-24 T 14-10-2018 TMO_2423 de337c0438d8df9ca32f182c6ec0a432 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 3.8E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2423 de337c0438d8df9ca32f182c6ec0a432 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2423 de337c0438d8df9ca32f182c6ec0a432 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2456 4b2d96008229a9bbfa93639404717471 290 Pfam PF03466 LysR substrate binding domain 86 268 2.0E-27 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2456 4b2d96008229a9bbfa93639404717471 290 SUPERFAMILY SSF53850 87 281 5.02E-25 T 14-10-2018 TMO_2456 4b2d96008229a9bbfa93639404717471 290 Gene3D G3DSA:3.40.190.10 160 253 5.6E-52 T 14-10-2018 TMO_2456 4b2d96008229a9bbfa93639404717471 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2456 4b2d96008229a9bbfa93639404717471 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2456 4b2d96008229a9bbfa93639404717471 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2456 4b2d96008229a9bbfa93639404717471 290 SUPERFAMILY SSF46785 1 109 6.94E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2456 4b2d96008229a9bbfa93639404717471 290 Gene3D G3DSA:1.10.10.10 1 84 8.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2456 4b2d96008229a9bbfa93639404717471 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2456 4b2d96008229a9bbfa93639404717471 290 Gene3D G3DSA:3.40.190.10 94 257 5.6E-52 T 14-10-2018 TMO_b0276 4678218c61d98d3e3d80ae9c49d703b2 230 Pfam PF09414 RNA ligase 39 201 7.7E-28 T 14-10-2018 IPR021122 RNA ligase domain, REL/Rln2 TMO_b0276 4678218c61d98d3e3d80ae9c49d703b2 230 SUPERFAMILY SSF56091 15 229 1.03E-38 T 14-10-2018 TMO_b0276 4678218c61d98d3e3d80ae9c49d703b2 230 Gene3D G3DSA:3.30.470.30 21 203 1.8E-32 T 14-10-2018 TMO_b0067 858ff5330fe0121f641c7b5d337fa0e0 414 Gene3D G3DSA:2.40.50.100 65 235 1.0E-58 T 14-10-2018 TMO_b0067 858ff5330fe0121f641c7b5d337fa0e0 414 Gene3D G3DSA:2.40.30.170 53 313 1.0E-58 T 14-10-2018 TMO_b0067 858ff5330fe0121f641c7b5d337fa0e0 414 Gene3D G3DSA:2.40.420.20 41 370 1.0E-58 T 14-10-2018 TMO_b0067 858ff5330fe0121f641c7b5d337fa0e0 414 Gene3D G3DSA:1.10.287.470 100 197 1.0E-58 T 14-10-2018 TMO_b0067 858ff5330fe0121f641c7b5d337fa0e0 414 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 307 3.2E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_b0067 858ff5330fe0121f641c7b5d337fa0e0 414 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 386 1.1E-42 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_b0067 858ff5330fe0121f641c7b5d337fa0e0 414 SUPERFAMILY SSF111369 54 311 9.55E-15 T 14-10-2018 TMO_0563 f76ca09ac9f3321b67af2d896d695e5e 272 SUPERFAMILY SSF53474 107 251 2.54E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0563 f76ca09ac9f3321b67af2d896d695e5e 272 Gene3D G3DSA:3.40.50.1820 76 251 6.5E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0013 7e00affd296cf807c6d34f52ca8a4529 234 SMART SM00862 150 225 5.2E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_c0013 7e00affd296cf807c6d34f52ca8a4529 234 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 7 225 1.8E-104 T 14-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 TMO_c0013 7e00affd296cf807c6d34f52ca8a4529 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 9.0E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_c0013 7e00affd296cf807c6d34f52ca8a4529 234 SUPERFAMILY SSF46894 126 226 3.4E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_c0013 7e00affd296cf807c6d34f52ca8a4529 234 Gene3D G3DSA:3.40.50.2300 1 125 1.8E-39 T 14-10-2018 TMO_c0013 7e00affd296cf807c6d34f52ca8a4529 234 Pfam PF00072 Response regulator receiver domain 8 117 4.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0013 7e00affd296cf807c6d34f52ca8a4529 234 SMART SM00448 5 116 1.6E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0013 7e00affd296cf807c6d34f52ca8a4529 234 Gene3D G3DSA:1.10.10.10 128 232 2.3E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0013 7e00affd296cf807c6d34f52ca8a4529 234 SUPERFAMILY SSF52172 5 122 4.13E-39 T 14-10-2018 IPR011006 CheY-like superfamily TMO_b0091 68bea18c47325c981c77ea999e928451 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 8.5E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_b0091 68bea18c47325c981c77ea999e928451 217 SUPERFAMILY SSF161098 14 199 4.67E-33 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0091 68bea18c47325c981c77ea999e928451 217 Gene3D G3DSA:1.10.3720.10 3 214 3.8E-40 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0091 68bea18c47325c981c77ea999e928451 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 213 5.2E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2919 5f9e89f59b1bca60249b2d4cfd829f09 176 Pfam PF13302 Acetyltransferase (GNAT) domain 8 147 3.1E-25 T 14-10-2018 IPR000182 GNAT domain TMO_2919 5f9e89f59b1bca60249b2d4cfd829f09 176 Gene3D G3DSA:3.40.630.30 2 170 1.3E-35 T 14-10-2018 TMO_2919 5f9e89f59b1bca60249b2d4cfd829f09 176 SUPERFAMILY SSF55729 6 165 1.44E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_b0414 efc5dce1506e8c39c3ab4e4c6e7d096c 501 Gene3D G3DSA:3.40.309.10 273 466 1.8E-174 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_b0414 efc5dce1506e8c39c3ab4e4c6e7d096c 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_b0414 efc5dce1506e8c39c3ab4e4c6e7d096c 501 SUPERFAMILY SSF53720 17 499 1.57E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_b0414 efc5dce1506e8c39c3ab4e4c6e7d096c 501 Pfam PF00171 Aldehyde dehydrogenase family 31 496 4.9E-167 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_b0414 efc5dce1506e8c39c3ab4e4c6e7d096c 501 Gene3D G3DSA:3.40.605.10 26 494 1.8E-174 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_2268 0b567b7c35b693f3ed8b7275150b64c9 304 PIRSF PIRSF018266 1 302 3.7E-75 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_2268 0b567b7c35b693f3ed8b7275150b64c9 304 Gene3D G3DSA:2.60.120.1440 91 218 1.8E-24 T 14-10-2018 TMO_2268 0b567b7c35b693f3ed8b7275150b64c9 304 Pfam PF04773 FecR protein 98 189 1.8E-19 T 14-10-2018 IPR006860 FecR protein TMO_2268 0b567b7c35b693f3ed8b7275150b64c9 304 Pfam PF16220 Domain of unknown function (DUF4880) 2 41 1.3E-12 T 14-10-2018 IPR032623 FecR, N-terminal TMO_c0255 dba7f290fd0d9a390eedb5a065aa758b 248 Gene3D G3DSA:1.10.3680.10 34 167 7.9E-20 T 14-10-2018 IPR029024 TerB-like TMO_c0255 dba7f290fd0d9a390eedb5a065aa758b 248 Gene3D G3DSA:1.10.287.110 171 244 3.2E-15 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_c0255 dba7f290fd0d9a390eedb5a065aa758b 248 PRINTS PR00625 DnaJ domain signature 184 202 7.4E-8 T 14-10-2018 IPR001623 DnaJ domain TMO_c0255 dba7f290fd0d9a390eedb5a065aa758b 248 PRINTS PR00625 DnaJ domain signature 202 217 7.4E-8 T 14-10-2018 IPR001623 DnaJ domain TMO_c0255 dba7f290fd0d9a390eedb5a065aa758b 248 Pfam PF05099 Tellurite resistance protein TerB 45 168 4.3E-31 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal TMO_c0255 dba7f290fd0d9a390eedb5a065aa758b 248 SUPERFAMILY SSF46565 178 241 5.83E-18 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_c0255 dba7f290fd0d9a390eedb5a065aa758b 248 SUPERFAMILY SSF158682 13 196 1.12E-26 T 14-10-2018 IPR029024 TerB-like TMO_c0255 dba7f290fd0d9a390eedb5a065aa758b 248 Pfam PF00226 DnaJ domain 182 239 1.6E-11 T 14-10-2018 IPR001623 DnaJ domain TMO_c0255 dba7f290fd0d9a390eedb5a065aa758b 248 SMART SM00271 181 246 1.4E-15 T 14-10-2018 IPR001623 DnaJ domain TMO_3033 d924c1399ea96cc80217e20cf3371b8b 148 SUPERFAMILY SSF54197 8 143 2.17E-27 T 14-10-2018 IPR036265 HIT-like superfamily TMO_3033 d924c1399ea96cc80217e20cf3371b8b 148 Gene3D G3DSA:3.30.428.10 4 148 7.2E-30 T 14-10-2018 IPR036265 HIT-like superfamily TMO_3033 d924c1399ea96cc80217e20cf3371b8b 148 Pfam PF01230 HIT domain 18 104 2.4E-12 T 14-10-2018 IPR001310 Histidine triad (HIT) protein TMO_3033 d924c1399ea96cc80217e20cf3371b8b 148 PRINTS PR00332 Histidine triad family signature 92 102 3.2E-10 T 14-10-2018 IPR001310 Histidine triad (HIT) protein TMO_3033 d924c1399ea96cc80217e20cf3371b8b 148 PRINTS PR00332 Histidine triad family signature 30 48 3.2E-10 T 14-10-2018 IPR001310 Histidine triad (HIT) protein TMO_3033 d924c1399ea96cc80217e20cf3371b8b 148 PRINTS PR00332 Histidine triad family signature 9 25 3.2E-10 T 14-10-2018 IPR001310 Histidine triad (HIT) protein TMO_2488 a8ca1430356b6d2f5a7254c33533f8d3 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 186 0.0027 T 14-10-2018 TMO_2488 a8ca1430356b6d2f5a7254c33533f8d3 250 Gene3D G3DSA:3.40.50.720 1 249 1.4E-74 T 14-10-2018 TMO_2488 a8ca1430356b6d2f5a7254c33533f8d3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.4E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2488 a8ca1430356b6d2f5a7254c33533f8d3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.4E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2488 a8ca1430356b6d2f5a7254c33533f8d3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.4E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2488 a8ca1430356b6d2f5a7254c33533f8d3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.4E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2488 a8ca1430356b6d2f5a7254c33533f8d3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.4E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2488 a8ca1430356b6d2f5a7254c33533f8d3 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 245 4.5E-57 T 14-10-2018 TMO_2488 a8ca1430356b6d2f5a7254c33533f8d3 250 SUPERFAMILY SSF51735 1 248 8.41E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 SUPERFAMILY SSF51735 4 249 1.15E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 Pfam PF00106 short chain dehydrogenase 7 198 3.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 9.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 9.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 9.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 9.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 9.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 Gene3D G3DSA:3.40.50.720 1 253 2.2E-74 T 14-10-2018 TMO_3163 cdf18041cb8a35cd6c75825aa9ed8471 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_0335 80a532c982bf6216e62a9f3a88b5f8e7 626 Gene3D G3DSA:3.40.50.410 405 612 3.0E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TMO_0335 80a532c982bf6216e62a9f3a88b5f8e7 626 PIRSF PIRSF031715 1 618 2.1E-238 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 TMO_0335 80a532c982bf6216e62a9f3a88b5f8e7 626 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 11 612 2.7E-240 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 TMO_0335 80a532c982bf6216e62a9f3a88b5f8e7 626 SMART SM00327 405 615 3.1E-4 T 14-10-2018 IPR002035 von Willebrand factor, type A TMO_0335 80a532c982bf6216e62a9f3a88b5f8e7 626 Pfam PF06213 Cobalamin biosynthesis protein CobT 9 273 4.7E-81 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 TMO_0335 80a532c982bf6216e62a9f3a88b5f8e7 626 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 395 611 8.2E-106 T 14-10-2018 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 TMO_0335 80a532c982bf6216e62a9f3a88b5f8e7 626 SUPERFAMILY SSF53300 408 602 1.17E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TMO_b0263 5826cf2c35b0bdd674c53a1e3d342108 222 PIRSF PIRSF010372 1 209 7.3E-60 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type TMO_b0263 5826cf2c35b0bdd674c53a1e3d342108 222 Gene3D G3DSA:2.30.110.10 1 207 1.2E-56 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_b0263 5826cf2c35b0bdd674c53a1e3d342108 222 Pfam PF04299 Putative FMN-binding domain 1 164 7.0E-40 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type TMO_b0263 5826cf2c35b0bdd674c53a1e3d342108 222 SUPERFAMILY SSF50475 12 188 1.28E-28 T 14-10-2018 TMO_0329 ab3a2fb455142a2988312dab5f6f9a84 269 SUPERFAMILY SSF52540 14 265 1.11E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0329 ab3a2fb455142a2988312dab5f6f9a84 269 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 244 266 5.8E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_0329 ab3a2fb455142a2988312dab5f6f9a84 269 Gene3D G3DSA:3.40.50.300 3 266 3.6E-58 T 14-10-2018 TMO_0329 ab3a2fb455142a2988312dab5f6f9a84 269 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0329 ab3a2fb455142a2988312dab5f6f9a84 269 Pfam PF00005 ABC transporter 29 190 3.5E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0329 ab3a2fb455142a2988312dab5f6f9a84 269 SMART SM00382 38 244 0.0096 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0174 4da1d2a9c157dd617793297adbc5b3d0 470 Pfam PF14535 AMP-binding enzyme C-terminal domain 373 469 4.1E-13 T 14-10-2018 IPR028154 AMP-dependent ligase, C-terminal TMO_b0174 4da1d2a9c157dd617793297adbc5b3d0 470 Pfam PF00501 AMP-binding enzyme 118 321 2.2E-7 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0174 4da1d2a9c157dd617793297adbc5b3d0 470 Gene3D G3DSA:3.40.50.12780 33 364 5.8E-73 T 14-10-2018 TMO_b0174 4da1d2a9c157dd617793297adbc5b3d0 470 Gene3D G3DSA:3.30.300.30 365 470 2.5E-17 T 14-10-2018 TMO_b0174 4da1d2a9c157dd617793297adbc5b3d0 470 SUPERFAMILY SSF56801 71 433 1.96E-25 T 14-10-2018 TMO_c0813 df836ce2e9b6a8e180791992dad09976 210 SUPERFAMILY SSF46689 12 96 6.48E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0813 df836ce2e9b6a8e180791992dad09976 210 Gene3D G3DSA:1.10.10.60 12 79 1.5E-31 T 14-10-2018 TMO_c0813 df836ce2e9b6a8e180791992dad09976 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 6.7E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0813 df836ce2e9b6a8e180791992dad09976 210 Gene3D G3DSA:1.10.357.10 83 206 9.1E-33 T 14-10-2018 TMO_c0813 df836ce2e9b6a8e180791992dad09976 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 3.9E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0813 df836ce2e9b6a8e180791992dad09976 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 3.9E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0813 df836ce2e9b6a8e180791992dad09976 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 68 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_c0813 df836ce2e9b6a8e180791992dad09976 210 SUPERFAMILY SSF48498 92 203 5.44E-29 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_2905 89a1f60c38fab33fcf2488f9326369a4 540 Gene3D G3DSA:1.10.3720.10 268 522 1.2E-21 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2905 89a1f60c38fab33fcf2488f9326369a4 540 SUPERFAMILY SSF161098 268 528 1.09E-27 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2905 89a1f60c38fab33fcf2488f9326369a4 540 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 348 527 2.4E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2905 89a1f60c38fab33fcf2488f9326369a4 540 SUPERFAMILY SSF161098 4 248 2.49E-32 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2905 89a1f60c38fab33fcf2488f9326369a4 540 Gene3D G3DSA:1.10.3720.10 1 252 6.0E-36 T 14-10-2018 IPR035906 MetI-like superfamily TMO_d0068 37c8d6cbbbca115e39d195bdca721214 178 Gene3D G3DSA:3.30.70.1150 93 172 6.6E-28 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal TMO_d0068 37c8d6cbbbca115e39d195bdca721214 178 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 11 85 1.0E-27 T 14-10-2018 TMO_d0068 37c8d6cbbbca115e39d195bdca721214 178 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 10 167 4.1E-53 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 TMO_d0068 37c8d6cbbbca115e39d195bdca721214 178 Pfam PF10369 Small subunit of acetolactate synthase 94 167 2.6E-27 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 TMO_d0068 37c8d6cbbbca115e39d195bdca721214 178 Gene3D G3DSA:3.30.70.260 8 88 1.9E-30 T 14-10-2018 TMO_d0068 37c8d6cbbbca115e39d195bdca721214 178 Pfam PF13710 ACT domain 20 82 3.6E-11 T 14-10-2018 TMO_d0068 37c8d6cbbbca115e39d195bdca721214 178 SUPERFAMILY SSF55021 89 169 1.11E-25 T 14-10-2018 TMO_d0068 37c8d6cbbbca115e39d195bdca721214 178 SUPERFAMILY SSF55021 10 85 2.41E-17 T 14-10-2018 TMO_1580 8f26030389846ab1bf2bf076427fcb83 210 Pfam PF10263 SprT-like family 68 143 1.7E-11 T 14-10-2018 IPR006640 SprT-like TMO_1580 8f26030389846ab1bf2bf076427fcb83 210 SMART SM00731 59 198 9.6E-4 T 14-10-2018 IPR006640 SprT-like TMO_0673 a744012fdd1af3caf387ccfa1b9a6e07 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 291 6.9E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2528 6fee21aac319237cb455ea84f9e45adb 348 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 25 1.8E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_2528 6fee21aac319237cb455ea84f9e45adb 348 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 24 5.3E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_2528 6fee21aac319237cb455ea84f9e45adb 348 Gene3D G3DSA:3.40.190.170 25 337 1.3E-71 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_2528 6fee21aac319237cb455ea84f9e45adb 348 SUPERFAMILY SSF53850 126 273 8.45E-6 T 14-10-2018 TMO_2528 6fee21aac319237cb455ea84f9e45adb 348 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 320 1.5E-37 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_3125 337040bd93b3950d3e398928502a4f38 258 SUPERFAMILY SSF103481 6 108 4.58E-16 T 14-10-2018 TMO_3125 337040bd93b3950d3e398928502a4f38 258 Pfam PF00892 EamA-like transporter family 121 256 2.6E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3125 337040bd93b3950d3e398928502a4f38 258 Pfam PF00892 EamA-like transporter family 4 105 1.2E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3125 337040bd93b3950d3e398928502a4f38 258 SUPERFAMILY SSF103481 166 257 5.89E-11 T 14-10-2018 TMO_1836 412863b35ff8a5a4d1d52fab3938b398 218 Gene3D G3DSA:1.10.8.60 136 203 5.9E-9 T 14-10-2018 TMO_1836 412863b35ff8a5a4d1d52fab3938b398 218 Gene3D G3DSA:3.40.50.300 13 134 2.5E-16 T 14-10-2018 TMO_1836 412863b35ff8a5a4d1d52fab3938b398 218 Pfam PF00308 Bacterial dnaA protein 70 172 3.4E-5 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA TMO_1836 412863b35ff8a5a4d1d52fab3938b398 218 SUPERFAMILY SSF52540 16 181 5.69E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0083 72677d82743a2aaf8f87b162af7ffcbe 499 Pfam PF09731 Mitochondrial inner membrane protein 261 463 6.2E-9 T 14-10-2018 IPR019133 Mitochondrial inner membrane protein Mitofilin Reactome: R-HSA-8949613 TMO_0083 72677d82743a2aaf8f87b162af7ffcbe 499 SUPERFAMILY SSF57997 179 289 2.94E-6 T 14-10-2018 TMO_d0020 a92c5eaaf356ee4b348b87d6802b6f1b 128 PIRSF PIRSF006113 1 118 6.3E-23 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 TMO_d0020 a92c5eaaf356ee4b348b87d6802b6f1b 128 Gene3D G3DSA:3.30.479.10 1 118 2.3E-34 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 TMO_d0020 a92c5eaaf356ee4b348b87d6802b6f1b 128 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 110 2.9E-27 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 TMO_d0020 a92c5eaaf356ee4b348b87d6802b6f1b 128 SUPERFAMILY SSF55620 1 110 6.67E-30 T 14-10-2018 TMO_2813 6b894040274132cc9d889802626d07de 499 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 221 275 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 1 444 5.3E-157 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 PRINTS PR01165 Cytochrome c oxidase subunit I signature 402 423 7.0E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 187 7.0E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 PRINTS PR01165 Cytochrome c oxidase subunit I signature 37 60 7.0E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 PRINTS PR01165 Cytochrome c oxidase subunit I signature 107 119 7.0E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 PRINTS PR01165 Cytochrome c oxidase subunit I signature 65 89 7.0E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 PRINTS PR01165 Cytochrome c oxidase subunit I signature 219 240 7.0E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 PRINTS PR01165 Cytochrome c oxidase subunit I signature 289 310 7.0E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 PRINTS PR01165 Cytochrome c oxidase subunit I signature 139 157 7.0E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 PRINTS PR01165 Cytochrome c oxidase subunit I signature 265 280 7.0E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 342 7.0E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 PRINTS PR01165 Cytochrome c oxidase subunit I signature 352 371 7.0E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 SUPERFAMILY SSF81442 1 492 5.63E-216 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2813 6b894040274132cc9d889802626d07de 499 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 1 493 3.5E-214 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 TMO_2813 6b894040274132cc9d889802626d07de 499 Gene3D G3DSA:1.20.210.10 1 499 8.3E-238 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1082 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 254 271 2.2E-23 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_1082 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 296 307 2.2E-23 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_1082 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 132 145 2.2E-23 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_1082 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 413 427 2.2E-23 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_1082 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 323 332 2.2E-23 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_1082 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 190 208 2.2E-23 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_1082 34b24a3cac0650e60336f6a5db829266 434 Gene3D G3DSA:1.50.10.10 90 430 3.5E-103 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TMO_1082 34b24a3cac0650e60336f6a5db829266 434 Pfam PF01270 Glycosyl hydrolases family 8 103 427 1.9E-71 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_1082 34b24a3cac0650e60336f6a5db829266 434 SUPERFAMILY SSF48208 101 431 7.49E-81 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TMO_3081 0f0a7a026fa66fdca53cfca881053f6f 186 Gene3D G3DSA:2.40.50.140 52 158 6.7E-37 T 14-10-2018 TMO_3081 0f0a7a026fa66fdca53cfca881053f6f 186 Pfam PF03100 CcmE 27 152 3.6E-42 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 TMO_3081 0f0a7a026fa66fdca53cfca881053f6f 186 SUPERFAMILY SSF82093 52 158 2.75E-36 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 TMO_3081 0f0a7a026fa66fdca53cfca881053f6f 186 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 24 162 30.997 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 TMO_c0254 7ea91b3a8bea3f8bf82d536f086ff231 345 SMART SM00108 219 340 4.0E-9 T 14-10-2018 IPR001480 Bulb-type lectin domain TMO_c0254 7ea91b3a8bea3f8bf82d536f086ff231 345 Gene3D G3DSA:2.90.10.20 304 343 3.2E-8 T 14-10-2018 TMO_c0254 7ea91b3a8bea3f8bf82d536f086ff231 345 Gene3D G3DSA:2.90.10.20 219 292 1.5E-18 T 14-10-2018 TMO_c0254 7ea91b3a8bea3f8bf82d536f086ff231 345 SUPERFAMILY SSF51110 269 337 1.05E-10 T 14-10-2018 IPR036426 Bulb-type lectin domain superfamily TMO_c0655 509f6c25892c76aab71ce12e5fda8ce8 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0655 509f6c25892c76aab71ce12e5fda8ce8 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 2.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0655 509f6c25892c76aab71ce12e5fda8ce8 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 2.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0655 509f6c25892c76aab71ce12e5fda8ce8 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 2.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0655 509f6c25892c76aab71ce12e5fda8ce8 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0655 509f6c25892c76aab71ce12e5fda8ce8 303 Pfam PF00106 short chain dehydrogenase 8 211 1.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0655 509f6c25892c76aab71ce12e5fda8ce8 303 SUPERFAMILY SSF51735 2 253 2.47E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0655 509f6c25892c76aab71ce12e5fda8ce8 303 Gene3D G3DSA:3.40.50.720 3 271 1.4E-37 T 14-10-2018 TMO_2834 640d8b3f7981bff5b60d3fcfac628d37 362 SUPERFAMILY SSF52540 49 198 1.91E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2834 640d8b3f7981bff5b60d3fcfac628d37 362 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 19 315 1.6E-91 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 TMO_2834 640d8b3f7981bff5b60d3fcfac628d37 362 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 330 35.492 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 TMO_2834 640d8b3f7981bff5b60d3fcfac628d37 362 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 20 324 8.4E-64 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 TMO_2657 9494e74e81338af9973c3e622ff854d6 489 Pfam PF00875 DNA photolyase 7 172 2.0E-49 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 TMO_2657 9494e74e81338af9973c3e622ff854d6 489 SUPERFAMILY SSF48173 199 488 8.63E-115 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 TMO_2657 9494e74e81338af9973c3e622ff854d6 489 Gene3D G3DSA:3.40.50.620 7 212 2.2E-87 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_2657 9494e74e81338af9973c3e622ff854d6 489 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 354 373 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal TMO_2657 9494e74e81338af9973c3e622ff854d6 489 Pfam PF03441 FAD binding domain of DNA photolyase 285 484 5.7E-89 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 TMO_2657 9494e74e81338af9973c3e622ff854d6 489 Gene3D G3DSA:1.25.40.80 137 299 2.2E-87 T 14-10-2018 TMO_2657 9494e74e81338af9973c3e622ff854d6 489 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 334 346 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal TMO_2657 9494e74e81338af9973c3e622ff854d6 489 SUPERFAMILY SSF52425 3 184 1.7E-51 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 TMO_2657 9494e74e81338af9973c3e622ff854d6 489 Gene3D G3DSA:1.10.579.10 303 489 4.2E-84 T 14-10-2018 TMO_2657 9494e74e81338af9973c3e622ff854d6 489 PRINTS PR00147 DNA photolyase signature 148 164 5.6E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 TMO_2657 9494e74e81338af9973c3e622ff854d6 489 PRINTS PR00147 DNA photolyase signature 393 407 5.6E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 TMO_2657 9494e74e81338af9973c3e622ff854d6 489 PRINTS PR00147 DNA photolyase signature 354 372 5.6E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 TMO_2657 9494e74e81338af9973c3e622ff854d6 489 PRINTS PR00147 DNA photolyase signature 334 350 5.6E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 TMO_0570 8542a8e44c37898efb5311b089ac9f34 479 ProSitePatterns PS00571 Amidases signature. 159 190 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TMO_0570 8542a8e44c37898efb5311b089ac9f34 479 Gene3D G3DSA:3.90.1300.10 6 473 2.3E-128 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_0570 8542a8e44c37898efb5311b089ac9f34 479 SUPERFAMILY SSF75304 5 464 5.89E-128 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_0570 8542a8e44c37898efb5311b089ac9f34 479 Pfam PF01425 Amidase 31 455 2.6E-100 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1818 02fe5f1afda72d2c1d84063742f9dd74 346 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 15 346 24.542 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 TMO_1818 02fe5f1afda72d2c1d84063742f9dd74 346 Gene3D G3DSA:3.30.1330.10 13 153 1.8E-30 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TMO_1818 02fe5f1afda72d2c1d84063742f9dd74 346 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 16 346 1.1E-75 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 TMO_1818 02fe5f1afda72d2c1d84063742f9dd74 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 40 150 2.5E-17 T 14-10-2018 IPR016188 PurM-like, N-terminal domain TMO_1818 02fe5f1afda72d2c1d84063742f9dd74 346 SUPERFAMILY SSF56042 159 321 3.14E-32 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TMO_1818 02fe5f1afda72d2c1d84063742f9dd74 346 Gene3D G3DSA:3.90.650.10 160 346 2.5E-43 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TMO_1818 02fe5f1afda72d2c1d84063742f9dd74 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 165 322 2.1E-12 T 14-10-2018 IPR010918 PurM-like, C-terminal domain TMO_1818 02fe5f1afda72d2c1d84063742f9dd74 346 SUPERFAMILY SSF55326 15 151 2.62E-27 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TMO_1818 02fe5f1afda72d2c1d84063742f9dd74 346 PIRSF PIRSF005303 12 346 8.7E-65 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 TMO_a0528 6cefa9cc85cdb516a6ef44483ad46a6e 131 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 55 123 2.2E-11 T 14-10-2018 IPR018660 C-type lysozyme inhibitor TMO_a0528 6cefa9cc85cdb516a6ef44483ad46a6e 131 SUPERFAMILY SSF141488 51 127 3.01E-9 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily TMO_a0528 6cefa9cc85cdb516a6ef44483ad46a6e 131 Gene3D G3DSA:2.40.128.200 49 130 1.8E-13 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily TMO_a0032 25b82d6561083a979bb5747ced36dc58 273 Pfam PF04366 Las17-binding protein actin regulator 151 261 2.7E-16 T 14-10-2018 IPR007461 Ysc84 actin-binding domain TMO_c0871 52fcd2ebfd491bcb0f27892d8ebec86c 354 Gene3D G3DSA:3.40.50.720 134 314 2.4E-131 T 14-10-2018 TMO_c0871 52fcd2ebfd491bcb0f27892d8ebec86c 354 SMART SM00829 24 344 2.4E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_c0871 52fcd2ebfd491bcb0f27892d8ebec86c 354 Gene3D G3DSA:3.90.180.10 30 343 2.4E-131 T 14-10-2018 TMO_c0871 52fcd2ebfd491bcb0f27892d8ebec86c 354 Pfam PF16884 N-terminal domain of oxidoreductase 14 120 3.9E-36 T 14-10-2018 TMO_c0871 52fcd2ebfd491bcb0f27892d8ebec86c 354 SUPERFAMILY SSF51735 132 311 1.45E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0871 52fcd2ebfd491bcb0f27892d8ebec86c 354 Pfam PF00107 Zinc-binding dehydrogenase 166 295 2.1E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_c0871 52fcd2ebfd491bcb0f27892d8ebec86c 354 SUPERFAMILY SSF50129 10 151 1.24E-41 T 14-10-2018 IPR011032 GroES-like superfamily TMO_0308 fc590d1ad54bdc03cb3920bf48da69bf 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 186 1.3E-41 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TMO_0308 fc590d1ad54bdc03cb3920bf48da69bf 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 188 3.6E-28 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain TMO_0308 fc590d1ad54bdc03cb3920bf48da69bf 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 29 98 1.0E-8 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TMO_0308 fc590d1ad54bdc03cb3920bf48da69bf 204 Gene3D G3DSA:2.40.240.10 3 98 4.0E-24 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TMO_0308 fc590d1ad54bdc03cb3920bf48da69bf 204 Gene3D G3DSA:2.170.120.20 99 189 6.3E-25 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal TMO_0308 fc590d1ad54bdc03cb3920bf48da69bf 204 Pfam PF01386 Ribosomal L25p family 7 95 3.0E-24 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TMO_0308 fc590d1ad54bdc03cb3920bf48da69bf 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 187 27.788 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TMO_0308 fc590d1ad54bdc03cb3920bf48da69bf 204 SUPERFAMILY SSF50715 6 194 3.14E-52 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TMO_a0425 19d869713e18e91ba599e4c6c49bc9fb 315 Gene3D G3DSA:3.40.50.1110 200 311 8.3E-9 T 14-10-2018 IPR036514 SGNH hydrolase superfamily TMO_a0425 19d869713e18e91ba599e4c6c49bc9fb 315 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 91 301 1.6E-8 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain TMO_a0425 19d869713e18e91ba599e4c6c49bc9fb 315 SUPERFAMILY SSF52266 88 311 4.25E-21 T 14-10-2018 TMO_a0425 19d869713e18e91ba599e4c6c49bc9fb 315 Gene3D G3DSA:3.40.50.1110 87 143 1.8E-5 T 14-10-2018 IPR036514 SGNH hydrolase superfamily TMO_0852 f56e402d80269f68889c80c031c3c9b0 341 Pfam PF00107 Zinc-binding dehydrogenase 163 284 1.4E-32 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_0852 f56e402d80269f68889c80c031c3c9b0 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 40 99 8.6E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_0852 f56e402d80269f68889c80c031c3c9b0 341 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 13 338 3.5E-148 T 14-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 TMO_0852 f56e402d80269f68889c80c031c3c9b0 341 Gene3D G3DSA:3.90.180.10 25 336 3.1E-111 T 14-10-2018 TMO_0852 f56e402d80269f68889c80c031c3c9b0 341 SUPERFAMILY SSF51735 123 300 2.3E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0852 f56e402d80269f68889c80c031c3c9b0 341 SMART SM00829 22 336 4.1E-51 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_0852 f56e402d80269f68889c80c031c3c9b0 341 Gene3D G3DSA:3.40.50.720 132 275 3.1E-111 T 14-10-2018 TMO_0852 f56e402d80269f68889c80c031c3c9b0 341 SUPERFAMILY SSF50129 13 152 1.07E-41 T 14-10-2018 IPR011032 GroES-like superfamily TMO_1809 f124001cf015cf554228c9fe08548358 114 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 4 95 5.5E-38 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 TMO_1809 f124001cf015cf554228c9fe08548358 114 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 50 69 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 TMO_1809 f124001cf015cf554228c9fe08548358 114 PRINTS PR01727 Prokaryotic integration host factor signature 44 59 1.1E-13 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_1809 f124001cf015cf554228c9fe08548358 114 PRINTS PR01727 Prokaryotic integration host factor signature 78 92 1.1E-13 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_1809 f124001cf015cf554228c9fe08548358 114 PRINTS PR01727 Prokaryotic integration host factor signature 62 75 1.1E-13 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_1809 f124001cf015cf554228c9fe08548358 114 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 3 99 26.908 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 TMO_1809 f124001cf015cf554228c9fe08548358 114 SUPERFAMILY SSF47729 5 94 4.27E-27 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TMO_1809 f124001cf015cf554228c9fe08548358 114 Pfam PF00216 Bacterial DNA-binding protein 5 93 4.5E-27 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_1809 f124001cf015cf554228c9fe08548358 114 SMART SM00411 5 94 7.0E-32 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_1809 f124001cf015cf554228c9fe08548358 114 Gene3D G3DSA:4.10.520.10 3 99 1.9E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TMO_c0123 fe917f1e492290b4f31c4b9a8cac02f4 335 Pfam PF00174 Oxidoreductase molybdopterin binding domain 115 271 8.9E-29 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 TMO_c0123 fe917f1e492290b4f31c4b9a8cac02f4 335 Gene3D G3DSA:3.90.420.10 75 334 6.5E-96 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 TMO_c0123 fe917f1e492290b4f31c4b9a8cac02f4 335 SUPERFAMILY SSF56524 85 325 4.45E-80 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 TMO_2086 2afb6b948dc5a6be55a0660b6360edff 271 Pfam PF09339 IclR helix-turn-helix domain 27 77 2.4E-17 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_2086 2afb6b948dc5a6be55a0660b6360edff 271 Gene3D G3DSA:1.10.10.10 12 93 3.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2086 2afb6b948dc5a6be55a0660b6360edff 271 Gene3D G3DSA:3.30.450.40 94 270 3.9E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_2086 2afb6b948dc5a6be55a0660b6360edff 271 SUPERFAMILY SSF55781 92 268 6.15E-40 T 14-10-2018 TMO_2086 2afb6b948dc5a6be55a0660b6360edff 271 SMART SM00346 25 115 3.4E-25 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_2086 2afb6b948dc5a6be55a0660b6360edff 271 Pfam PF01614 Bacterial transcriptional regulator 143 266 6.5E-14 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_2086 2afb6b948dc5a6be55a0660b6360edff 271 SUPERFAMILY SSF46785 25 97 1.57E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 403 418 1.4E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 297 314 1.4E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 429 442 1.4E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 336 352 1.4E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 Pfam PF01979 Amidohydrolase family 127 451 4.1E-75 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 569 5.6E-286 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 ProSitePatterns PS01120 Urease nickel ligands signature. 129 142 - T 14-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 121 3.3E-54 T 14-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 SUPERFAMILY SSF51338 4 179 1.14E-58 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 Hamap MF_01953 Urease subunit alpha [ureC]. 3 569 56.664 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 Gene3D G3DSA:2.30.40.10 5 482 1.8E-292 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 SUPERFAMILY SSF51556 131 569 6.81E-196 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 ProSitePatterns PS00145 Urease active site. 319 335 - T 14-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1730 86d1ff86175881b78ab8e1003cc5942d 569 Gene3D G3DSA:3.20.20.140 131 569 1.8E-292 T 14-10-2018 TMO_c0400 ebfbf07953ed496853bbf57962510270 540 Gene3D G3DSA:2.160.20.10 83 308 1.8E-7 T 14-10-2018 IPR012334 Pectin lyase fold TMO_c0400 ebfbf07953ed496853bbf57962510270 540 SUPERFAMILY SSF51126 95 361 6.57E-8 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor TMO_1946 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.5E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1946 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 Gene3D G3DSA:3.40.190.290 90 292 5.3E-45 T 14-10-2018 TMO_1946 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 Gene3D G3DSA:1.10.10.10 1 84 9.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1946 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 SUPERFAMILY SSF46785 1 110 1.06E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1946 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 Pfam PF03466 LysR substrate binding domain 87 291 6.5E-47 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1946 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1946 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1946 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1946 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 SUPERFAMILY SSF53850 88 291 1.3E-44 T 14-10-2018 TMO_0976 c65fb9f58bc47210a3e50a74dae4f41a 155 Pfam PF13452 N-terminal half of MaoC dehydratase 5 139 5.8E-38 T 14-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 TMO_0976 c65fb9f58bc47210a3e50a74dae4f41a 155 SUPERFAMILY SSF54637 6 148 1.37E-33 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0976 c65fb9f58bc47210a3e50a74dae4f41a 155 Gene3D G3DSA:3.10.129.10 1 152 1.3E-33 T 14-10-2018 TMO_0976 c65fb9f58bc47210a3e50a74dae4f41a 155 PIRSF PIRSF018072 1 151 4.7E-40 T 14-10-2018 IPR016709 Uncharacterised protein family UPF0336 TMO_b0572 caaa3464980fd2b403059ddad0333033 691 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 494 669 5.5E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_b0572 caaa3464980fd2b403059ddad0333033 691 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 529 556 1.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_b0572 caaa3464980fd2b403059ddad0333033 691 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 558 587 1.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_b0572 caaa3464980fd2b403059ddad0333033 691 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 481 1.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_b0572 caaa3464980fd2b403059ddad0333033 691 SUPERFAMILY SSF58104 371 684 3.53E-57 T 14-10-2018 TMO_b0572 caaa3464980fd2b403059ddad0333033 691 Gene3D G3DSA:1.10.287.950 401 691 9.4E-54 T 14-10-2018 TMO_b0572 caaa3464980fd2b403059ddad0333033 691 SMART SM00283 431 685 4.9E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_b0572 caaa3464980fd2b403059ddad0333033 691 SMART SM00304 342 395 1.4E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_b0572 caaa3464980fd2b403059ddad0333033 691 Gene3D G3DSA:1.20.1480.50 303 400 8.9E-9 T 14-10-2018 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 SUPERFAMILY SSF81923 4 157 4.91E-40 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 Gene3D G3DSA:3.40.50.300 550 764 1.1E-86 T 14-10-2018 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 Gene3D G3DSA:1.10.8.60 766 861 1.9E-30 T 14-10-2018 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 336 6.5E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 Gene3D G3DSA:3.40.50.300 350 544 7.3E-73 T 14-10-2018 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 SUPERFAMILY SSF52540 161 543 1.21E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 146 3.3E-8 T 14-10-2018 IPR004176 Clp, N-terminal TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 6.5E-15 T 14-10-2018 IPR004176 Clp, N-terminal TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 SUPERFAMILY SSF52540 546 855 2.77E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 9.1E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 8.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 8.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 8.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 8.0E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 Gene3D G3DSA:3.40.50.300 161 349 4.9E-74 T 14-10-2018 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 Gene3D G3DSA:1.10.1780.10 1 160 4.6E-34 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 6.5E-53 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 SMART SM01086 766 855 1.1E-41 T 14-10-2018 IPR019489 Clp ATPase, C-terminal TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 SMART SM00382 200 345 6.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 SMART SM00382 597 767 2.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0384 2082dcca0198d40083f3d91fe08368c4 865 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TMO_2018 e61da8d0bb60f9e0152aed65596a0e4a 421 Gene3D G3DSA:3.40.50.2000 97 209 1.1E-53 T 14-10-2018 TMO_2018 e61da8d0bb60f9e0152aed65596a0e4a 421 Pfam PF00534 Glycosyl transferases group 1 232 393 2.0E-30 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 TMO_2018 e61da8d0bb60f9e0152aed65596a0e4a 421 SUPERFAMILY SSF53756 24 409 1.26E-60 T 14-10-2018 TMO_2018 e61da8d0bb60f9e0152aed65596a0e4a 421 Gene3D G3DSA:3.40.50.2000 210 399 1.1E-53 T 14-10-2018 TMO_2413 239e9f6b097f74b96e40955a9d39928d 504 Gene3D G3DSA:3.30.1330.120 290 427 3.4E-27 T 14-10-2018 TMO_2413 239e9f6b097f74b96e40955a9d39928d 504 SUPERFAMILY SSF103378 18 481 1.31E-119 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 TMO_2413 239e9f6b097f74b96e40955a9d39928d 504 Gene3D G3DSA:1.10.4100.10 10 289 4.9E-49 T 14-10-2018 TMO_2413 239e9f6b097f74b96e40955a9d39928d 504 Pfam PF03972 MmgE/PrpD family 20 471 6.7E-126 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 TMO_1621 efa5b96207ff4b7c94d2667e08c897df 296 Gene3D G3DSA:3.40.50.1820 10 295 6.5E-84 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1621 efa5b96207ff4b7c94d2667e08c897df 296 Pfam PF00561 alpha/beta hydrolase fold 32 157 1.4E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_1621 efa5b96207ff4b7c94d2667e08c897df 296 SUPERFAMILY SSF53474 8 295 1.49E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1621 efa5b96207ff4b7c94d2667e08c897df 296 PRINTS PR00412 Epoxide hydrolase signature 38 56 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_1621 efa5b96207ff4b7c94d2667e08c897df 296 PRINTS PR00412 Epoxide hydrolase signature 271 293 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_1621 efa5b96207ff4b7c94d2667e08c897df 296 PRINTS PR00412 Epoxide hydrolase signature 106 119 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_1630 876faa76342c455d0f063b3be36fa93b 442 Pfam PF00072 Response regulator receiver domain 7 106 3.6E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1630 876faa76342c455d0f063b3be36fa93b 442 SMART SM00448 5 118 1.1E-4 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1630 876faa76342c455d0f063b3be36fa93b 442 SUPERFAMILY SSF52172 174 287 1.17E-11 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1630 876faa76342c455d0f063b3be36fa93b 442 Gene3D G3DSA:3.40.50.12740 5 289 4.6E-35 T 14-10-2018 TMO_1630 876faa76342c455d0f063b3be36fa93b 442 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 440 1.0E-6 T 14-10-2018 IPR000160 GGDEF domain TMO_1630 876faa76342c455d0f063b3be36fa93b 442 Gene3D G3DSA:3.30.70.270 295 442 1.3E-11 T 14-10-2018 TMO_1630 876faa76342c455d0f063b3be36fa93b 442 SUPERFAMILY SSF55073 300 441 3.3E-8 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_1630 876faa76342c455d0f063b3be36fa93b 442 SUPERFAMILY SSF52172 6 135 1.05E-19 T 14-10-2018 IPR011006 CheY-like superfamily TMO_a0173 13f552a8abe350a0f7838ee1cb0d8868 439 Pfam PF01266 FAD dependent oxidoreductase 36 393 2.3E-36 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_a0173 13f552a8abe350a0f7838ee1cb0d8868 439 Gene3D G3DSA:3.30.9.10 128 355 1.7E-47 T 14-10-2018 TMO_a0173 13f552a8abe350a0f7838ee1cb0d8868 439 Gene3D G3DSA:3.50.50.60 36 393 1.7E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0173 13f552a8abe350a0f7838ee1cb0d8868 439 SUPERFAMILY SSF51905 35 402 1.12E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_3539 e5b28ea92b00d12829536b0f282d2328 164 SUPERFAMILY SSF74942 84 154 1.07E-15 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily TMO_3539 e5b28ea92b00d12829536b0f282d2328 164 Gene3D G3DSA:3.30.300.70 1 80 1.3E-18 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily TMO_3539 e5b28ea92b00d12829536b0f282d2328 164 SUPERFAMILY SSF75420 3 83 3.66E-21 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily TMO_3539 e5b28ea92b00d12829536b0f282d2328 164 Pfam PF02576 RimP N-terminal domain 10 83 5.6E-25 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal TMO_3539 e5b28ea92b00d12829536b0f282d2328 164 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 153 24.185 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 TMO_3539 e5b28ea92b00d12829536b0f282d2328 164 Pfam PF17384 RimP C-terminal SH3 domain 86 152 3.8E-14 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal TMO_2765 da0bed0ffaf32d368bd01493370d3c99 188 Gene3D G3DSA:2.60.120.10 101 188 9.3E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_2765 da0bed0ffaf32d368bd01493370d3c99 188 Pfam PF07883 Cupin domain 135 183 5.3E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_2765 da0bed0ffaf32d368bd01493370d3c99 188 SUPERFAMILY SSF51182 100 185 2.65E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_2765 da0bed0ffaf32d368bd01493370d3c99 188 Pfam PF01381 Helix-turn-helix 19 68 1.4E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_2765 da0bed0ffaf32d368bd01493370d3c99 188 SMART SM00530 18 73 2.8E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_2765 da0bed0ffaf32d368bd01493370d3c99 188 Gene3D G3DSA:1.10.260.40 2 79 5.2E-19 T 14-10-2018 TMO_2765 da0bed0ffaf32d368bd01493370d3c99 188 SUPERFAMILY SSF47413 12 76 1.98E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_2335 1f91bfce088012c72c884bf2b531de5b 219 Gene3D G3DSA:3.40.50.720 2 113 6.5E-11 T 14-10-2018 TMO_2335 1f91bfce088012c72c884bf2b531de5b 219 Pfam PF13241 Putative NAD(P)-binding 9 117 4.9E-8 T 14-10-2018 TMO_2335 1f91bfce088012c72c884bf2b531de5b 219 Gene3D G3DSA:3.30.160.110 115 149 2.3E-7 T 14-10-2018 TMO_2335 1f91bfce088012c72c884bf2b531de5b 219 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 5 168 1.7E-21 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2335 1f91bfce088012c72c884bf2b531de5b 219 SUPERFAMILY SSF75615 116 175 6.41E-12 T 14-10-2018 TMO_2335 1f91bfce088012c72c884bf2b531de5b 219 SUPERFAMILY SSF51735 4 112 3.25E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2335 1f91bfce088012c72c884bf2b531de5b 219 Pfam PF14824 Sirohaem biosynthesis protein central 121 147 1.2E-6 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TMO_2419 08f320ece0980e709e77b82cc84f6350 77 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 4 69 7.6E-11 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D TMO_a0548 9d84a7037d7f6e93f49b9f99ac898d47 217 Pfam PF00685 Sulfotransferase domain 30 168 9.5E-8 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 TMO_a0548 9d84a7037d7f6e93f49b9f99ac898d47 217 SUPERFAMILY SSF52540 14 199 1.67E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0548 9d84a7037d7f6e93f49b9f99ac898d47 217 Gene3D G3DSA:3.40.50.300 2 207 3.5E-38 T 14-10-2018 TMO_c0407 eb84853a6d2847dff5c9296770afd47f 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 260 5.5E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_0459 32bfb87cabc07cade6b72ddbbc3308cd 220 SUPERFAMILY SSF141523 74 209 6.8E-12 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like TMO_0459 32bfb87cabc07cade6b72ddbbc3308cd 220 Pfam PF03734 L,D-transpeptidase catalytic domain 80 207 9.6E-10 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 TMO_0459 32bfb87cabc07cade6b72ddbbc3308cd 220 Gene3D G3DSA:2.40.440.10 39 210 2.1E-10 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like TMO_a0339 814f1a957c99ae83b6ae88aeca0d4b0b 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 2 47 2.6E-5 T 14-10-2018 TMO_a0339 814f1a957c99ae83b6ae88aeca0d4b0b 86 Gene3D G3DSA:3.40.1620.10 1 48 4.8E-6 T 14-10-2018 TMO_a0339 814f1a957c99ae83b6ae88aeca0d4b0b 86 SUPERFAMILY SSF143120 3 59 1.31E-9 T 14-10-2018 IPR036165 YefM-like superfamily TMO_a0339 814f1a957c99ae83b6ae88aeca0d4b0b 86 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 47 1.9E-7 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TMO_2255 92d1655bfe2ef00ca443a1e8df4db00b 105 Gene3D G3DSA:1.10.790.20 1 104 2.9E-29 T 14-10-2018 TMO_2255 92d1655bfe2ef00ca443a1e8df4db00b 105 PIRSF PIRSF031780 1 104 4.8E-24 T 14-10-2018 IPR009945 Protein of unknown function DUF1476 TMO_2255 92d1655bfe2ef00ca443a1e8df4db00b 105 Pfam PF07345 Domain of unknown function (DUF1476) 1 99 1.1E-31 T 14-10-2018 IPR009945 Protein of unknown function DUF1476 TMO_3467 f14fc7332407b5e754848a75f62cda66 383 Gene3D G3DSA:3.30.950.10 199 314 7.6E-39 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TMO_3467 f14fc7332407b5e754848a75f62cda66 383 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 91 309 36.035 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TMO_3467 f14fc7332407b5e754848a75f62cda66 383 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 92 369 1.5E-67 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TMO_3467 f14fc7332407b5e754848a75f62cda66 383 Gene3D G3DSA:3.40.1010.10 83 198 2.0E-39 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TMO_3467 f14fc7332407b5e754848a75f62cda66 383 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 92 291 2.2E-32 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TMO_3467 f14fc7332407b5e754848a75f62cda66 383 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 169 180 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 TMO_3467 f14fc7332407b5e754848a75f62cda66 383 SUPERFAMILY SSF53790 91 307 2.62E-76 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 5.5E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 5.5E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 5.5E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 5.5E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 SMART SM00840 342 401 1.8E-15 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 Pfam PF09190 DALR domain 343 401 1.2E-13 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 Gene3D G3DSA:1.20.120.640 307 462 7.2E-40 T 14-10-2018 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 SUPERFAMILY SSF47323 317 462 2.09E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 Gene3D G3DSA:3.40.50.620 1 306 1.5E-128 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_2297 5fd7dc1405eb9b215c74119537265018 463 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 462 1.3E-157 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 314 4.2E-122 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 SUPERFAMILY SSF52374 4 313 4.56E-93 T 14-10-2018 TMO_2297 5fd7dc1405eb9b215c74119537265018 463 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 463 38.134 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TMO_2946 c25ecd385daf5308f5fde100bb1ab5a9 264 Gene3D G3DSA:3.20.20.410 1 225 3.7E-50 T 14-10-2018 IPR036520 UPF0759 superfamily TMO_2946 c25ecd385daf5308f5fde100bb1ab5a9 264 Pfam PF01904 Protein of unknown function DUF72 22 260 4.8E-54 T 14-10-2018 IPR002763 Protein of unknown function DUF72 TMO_2946 c25ecd385daf5308f5fde100bb1ab5a9 264 SUPERFAMILY SSF117396 5 262 1.57E-69 T 14-10-2018 IPR036520 UPF0759 superfamily TMO_0851 a85ec966a252e1699099c89c338b5b66 197 Pfam PF06242 Protein of unknown function (DUF1013) 34 167 1.6E-63 T 14-10-2018 IPR010421 Protein of unknown function DUF1013 TMO_0814 212de148d29558fc0f7b2f7aac14bb19 469 Pfam PF00929 Exonuclease 272 432 6.5E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TMO_0814 212de148d29558fc0f7b2f7aac14bb19 469 SMART SM00479 268 441 1.5E-35 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TMO_0814 212de148d29558fc0f7b2f7aac14bb19 469 Gene3D G3DSA:3.30.420.10 268 440 8.1E-44 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_0814 212de148d29558fc0f7b2f7aac14bb19 469 SUPERFAMILY SSF53098 264 446 1.2E-46 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_2663 790820a28259fb521a4adb643597fdcc 538 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 6 234 2.5E-72 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein TMO_2663 790820a28259fb521a4adb643597fdcc 538 Gene3D G3DSA:1.10.579.10 329 449 6.0E-50 T 14-10-2018 TMO_2663 790820a28259fb521a4adb643597fdcc 538 Gene3D G3DSA:1.10.10.1710 450 521 2.9E-23 T 14-10-2018 TMO_2663 790820a28259fb521a4adb643597fdcc 538 Gene3D G3DSA:3.40.50.620 7 236 4.6E-115 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_2663 790820a28259fb521a4adb643597fdcc 538 SUPERFAMILY SSF48173 235 500 3.79E-59 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 TMO_2663 790820a28259fb521a4adb643597fdcc 538 Gene3D G3DSA:1.25.40.80 134 325 4.6E-115 T 14-10-2018 TMO_2580 44af1dd992683b92634f41c809e4e99f 162 Pfam PF03061 Thioesterase superfamily 71 143 5.7E-11 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_2580 44af1dd992683b92634f41c809e4e99f 162 SUPERFAMILY SSF54637 24 150 6.3E-26 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_2580 44af1dd992683b92634f41c809e4e99f 162 Gene3D G3DSA:3.10.129.10 22 159 6.0E-30 T 14-10-2018 TMO_2580 44af1dd992683b92634f41c809e4e99f 162 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 41 145 9.7E-16 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_0621 19bbfda7e238b0271762586dd0d3ada8 69 Gene3D G3DSA:1.10.10.1100 1 53 4.3E-15 T 14-10-2018 TMO_0621 19bbfda7e238b0271762586dd0d3ada8 69 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 48 2.9E-10 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain TMO_2641 a367b8cab36763a5f894adbfed8b37d9 125 Gene3D G3DSA:3.30.1390.10 55 125 2.8E-33 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TMO_2641 a367b8cab36763a5f894adbfed8b37d9 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 106 5.0E-17 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2641 a367b8cab36763a5f894adbfed8b37d9 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 1.2E-32 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2641 a367b8cab36763a5f894adbfed8b37d9 125 SUPERFAMILY SSF54736 54 125 1.36E-26 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TMO_2641 a367b8cab36763a5f894adbfed8b37d9 125 Gene3D G3DSA:1.20.5.710 4 54 2.0E-17 T 14-10-2018 TMO_2641 a367b8cab36763a5f894adbfed8b37d9 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 125 25.582 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2641 a367b8cab36763a5f894adbfed8b37d9 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 7.9E-49 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2641 a367b8cab36763a5f894adbfed8b37d9 125 SUPERFAMILY SSF48300 4 61 1.14E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2641 a367b8cab36763a5f894adbfed8b37d9 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 6 50 1.1E-17 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1381 b98e7fb9dc9d67030c3c72875507b294 549 Pfam PF00501 AMP-binding enzyme 75 432 8.3E-55 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_1381 b98e7fb9dc9d67030c3c72875507b294 549 Gene3D G3DSA:3.40.50.12780 8 429 5.0E-67 T 14-10-2018 TMO_1381 b98e7fb9dc9d67030c3c72875507b294 549 SUPERFAMILY SSF56801 10 529 2.22E-101 T 14-10-2018 TMO_1381 b98e7fb9dc9d67030c3c72875507b294 549 Gene3D G3DSA:3.30.300.30 430 531 5.8E-23 T 14-10-2018 TMO_1381 b98e7fb9dc9d67030c3c72875507b294 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 441 517 9.7E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_1381 b98e7fb9dc9d67030c3c72875507b294 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_3263 d2c862061c3be3f037245ca57ff1eb1c 413 SUPERFAMILY SSF51735 19 150 3.94E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3263 d2c862061c3be3f037245ca57ff1eb1c 413 Pfam PF13380 CoA binding domain 25 148 7.9E-24 T 14-10-2018 IPR003781 CoA-binding GO:0048037 TMO_3263 d2c862061c3be3f037245ca57ff1eb1c 413 Gene3D G3DSA:3.40.50.720 16 148 3.3E-36 T 14-10-2018 TMO_3263 d2c862061c3be3f037245ca57ff1eb1c 413 Gene3D G3DSA:3.40.50.261 149 308 1.0E-43 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3263 d2c862061c3be3f037245ca57ff1eb1c 413 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 173 307 1.1E-43 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain TMO_3263 d2c862061c3be3f037245ca57ff1eb1c 413 SUPERFAMILY SSF52210 165 309 1.44E-34 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TMO_3263 d2c862061c3be3f037245ca57ff1eb1c 413 SMART SM00881 21 114 4.4E-30 T 14-10-2018 IPR003781 CoA-binding GO:0048037 TMO_3342 4940397b05cf73f40c3ef61bf0c404a5 487 PIRSF PIRSF006060 17 482 6.0E-46 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TMO_3342 4940397b05cf73f40c3ef61bf0c404a5 487 Gene3D G3DSA:1.20.1740.10 22 471 1.2E-31 T 14-10-2018 TMO_3342 4940397b05cf73f40c3ef61bf0c404a5 487 Pfam PF00324 Amino acid permease 30 433 1.7E-18 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 SMART SM00304 212 265 4.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 1.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 476 505 1.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 322 351 1.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 426 1.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 1.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 SMART SM00283 301 555 2.3E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 372 522 2.2E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 Gene3D G3DSA:1.10.287.950 271 560 8.4E-54 T 14-10-2018 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 Gene3D G3DSA:1.20.1480.50 174 270 1.6E-14 T 14-10-2018 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 SUPERFAMILY SSF58104 241 554 4.32E-60 T 14-10-2018 TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 185 4.9E-27 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain TMO_c0511 2bdbcef238378edd16b601d5f3075689 561 Pfam PF00672 HAMP domain 212 258 1.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_a0184 4437b6879cff502736f5c4d4597faa89 229 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 130 1.5E-9 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_a0184 4437b6879cff502736f5c4d4597faa89 229 Gene3D G3DSA:2.30.110.10 31 160 6.1E-18 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_a0184 4437b6879cff502736f5c4d4597faa89 229 SUPERFAMILY SSF50475 38 159 9.08E-15 T 14-10-2018 TMO_1745 9e32005014ace3ddb571628d82250fd9 316 Pfam PF00892 EamA-like transporter family 152 283 1.7E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1745 9e32005014ace3ddb571628d82250fd9 316 Pfam PF00892 EamA-like transporter family 8 137 8.7E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1745 9e32005014ace3ddb571628d82250fd9 316 SUPERFAMILY SSF103481 34 138 2.88E-11 T 14-10-2018 TMO_1745 9e32005014ace3ddb571628d82250fd9 316 SUPERFAMILY SSF103481 208 289 5.89E-10 T 14-10-2018 TMO_c0762 2d154b81e06c22bced1cd8d9d7cc2f72 67 Pfam PF06568 Domain of unknown function (DUF1127) 15 50 2.4E-15 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 TMO_2556 254a7fb63de21ed0ea7a0e68bb6389d0 257 Gene3D G3DSA:3.40.50.80 100 253 6.5E-43 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_2556 254a7fb63de21ed0ea7a0e68bb6389d0 257 SUPERFAMILY SSF52343 104 255 1.17E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_2556 254a7fb63de21ed0ea7a0e68bb6389d0 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 4.1E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TMO_2556 254a7fb63de21ed0ea7a0e68bb6389d0 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 4.1E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TMO_2556 254a7fb63de21ed0ea7a0e68bb6389d0 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 4.1E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TMO_2556 254a7fb63de21ed0ea7a0e68bb6389d0 257 Gene3D G3DSA:2.40.30.10 1 96 1.3E-27 T 14-10-2018 TMO_2556 254a7fb63de21ed0ea7a0e68bb6389d0 257 SUPERFAMILY SSF63380 4 99 1.4E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TMO_2556 254a7fb63de21ed0ea7a0e68bb6389d0 257 Pfam PF00970 Oxidoreductase FAD-binding domain 18 92 1.3E-6 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 TMO_2556 254a7fb63de21ed0ea7a0e68bb6389d0 257 Pfam PF00175 Oxidoreductase NAD-binding domain 112 229 7.3E-7 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TMO_0996 510be92b83642c81bcba63207bbc7535 604 Pfam PF00733 Asparagine synthase 252 585 2.7E-75 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_0996 510be92b83642c81bcba63207bbc7535 604 SUPERFAMILY SSF56235 1 225 5.75E-54 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_0996 510be92b83642c81bcba63207bbc7535 604 Pfam PF13537 Glutamine amidotransferase domain 47 171 3.1E-33 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TMO_0996 510be92b83642c81bcba63207bbc7535 604 SUPERFAMILY SSF52402 243 542 1.11E-63 T 14-10-2018 TMO_0996 510be92b83642c81bcba63207bbc7535 604 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 526 3.6E-112 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_0996 510be92b83642c81bcba63207bbc7535 604 Gene3D G3DSA:3.60.20.10 3 187 2.5E-49 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_0996 510be92b83642c81bcba63207bbc7535 604 PIRSF PIRSF001589 1 602 1.1E-155 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_2360 8fc8394164770d4223e53793e236d545 651 Pfam PF12704 MacB-like periplasmic core domain 277 496 4.4E-39 T 14-10-2018 IPR025857 MacB-like periplasmic core domain TMO_2360 8fc8394164770d4223e53793e236d545 651 SMART SM00382 40 227 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2360 8fc8394164770d4223e53793e236d545 651 Pfam PF00005 ABC transporter 31 179 4.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2360 8fc8394164770d4223e53793e236d545 651 SUPERFAMILY SSF52540 11 235 3.3E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2360 8fc8394164770d4223e53793e236d545 651 Pfam PF02687 FtsX-like permease family 558 644 2.8E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TMO_2360 8fc8394164770d4223e53793e236d545 651 Gene3D G3DSA:3.40.50.300 9 247 6.3E-69 T 14-10-2018 TMO_2360 8fc8394164770d4223e53793e236d545 651 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0486 f81dd436a93ffb682b6a26fea8e40c5c 598 Pfam PF01734 Patatin-like phospholipase 14 374 8.7E-21 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TMO_b0486 f81dd436a93ffb682b6a26fea8e40c5c 598 SUPERFAMILY SSF52151 37 412 1.46E-9 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TMO_b0486 f81dd436a93ffb682b6a26fea8e40c5c 598 Gene3D G3DSA:3.40.1090.10 295 387 9.3E-6 T 14-10-2018 TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 9.8E-64 T 14-10-2018 TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 3.4E-92 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 Gene3D G3DSA:3.40.50.720 1 245 3.3E-83 T 14-10-2018 TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 7.0E-6 T 14-10-2018 TMO_1865 a7739ae9d8d72bf733b9f0c4b77f670d 245 SUPERFAMILY SSF51735 7 244 5.44E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0402 e5cc6bc762d50362251012e2f65d9fc0 539 Gene3D G3DSA:3.50.50.60 199 341 7.9E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0402 e5cc6bc762d50362251012e2f65d9fc0 539 Gene3D G3DSA:3.50.50.60 18 89 4.0E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0402 e5cc6bc762d50362251012e2f65d9fc0 539 SUPERFAMILY SSF51905 17 520 4.8E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0402 e5cc6bc762d50362251012e2f65d9fc0 539 Pfam PF13450 NAD(P)-binding Rossmann-like domain 22 89 2.8E-11 T 14-10-2018 TMO_c0035 a776f52cd62755dfb4bf9fe09562d930 164 Pfam PF04002 RadC-like JAB domain 45 162 1.2E-38 T 14-10-2018 IPR025657 RadC-like JAB domain TMO_c0035 a776f52cd62755dfb4bf9fe09562d930 164 SUPERFAMILY SSF102712 52 141 3.27E-5 T 14-10-2018 TMO_c0035 a776f52cd62755dfb4bf9fe09562d930 164 Gene3D G3DSA:3.40.140.10 40 164 5.5E-38 T 14-10-2018 TMO_3237 15298e9a72b6aa850692d749e1f4719a 445 Gene3D G3DSA:3.40.1190.10 1 292 5.2E-79 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_3237 15298e9a72b6aa850692d749e1f4719a 445 Pfam PF08245 Mur ligase middle domain 47 200 3.4E-7 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TMO_3237 15298e9a72b6aa850692d749e1f4719a 445 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 136 151 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 TMO_3237 15298e9a72b6aa850692d749e1f4719a 445 SUPERFAMILY SSF53623 7 271 5.1E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TMO_3237 15298e9a72b6aa850692d749e1f4719a 445 SUPERFAMILY SSF53244 314 437 1.21E-19 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TMO_3237 15298e9a72b6aa850692d749e1f4719a 445 Gene3D G3DSA:3.90.190.20 310 443 4.9E-18 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TMO_3237 15298e9a72b6aa850692d749e1f4719a 445 TIGRFAM TIGR01499 folC: bifunctional protein FolC 24 434 1.9E-97 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 TMO_3237 15298e9a72b6aa850692d749e1f4719a 445 PIRSF PIRSF001563 1 442 3.2E-95 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 TMO_a0299 c3edd650ea975932b70c3f616444d9b7 290 Gene3D G3DSA:3.20.20.140 8 290 1.1E-68 T 14-10-2018 TMO_a0299 c3edd650ea975932b70c3f616444d9b7 290 Pfam PF04909 Amidohydrolase 20 290 1.8E-33 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_a0299 c3edd650ea975932b70c3f616444d9b7 290 SUPERFAMILY SSF51556 14 290 1.02E-59 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 Pfam PF00117 Glutamine amidotransferase class-I 10 193 2.1E-54 T 14-10-2018 IPR017926 Glutamine amidotransferase TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 2.2E-13 T 14-10-2018 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 2.2E-13 T 14-10-2018 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.2E-13 T 14-10-2018 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 8 193 6.0E-65 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 SUPERFAMILY SSF52317 7 196 2.89E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 3.4E-9 T 14-10-2018 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 3.4E-9 T 14-10-2018 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.4E-33 T 14-10-2018 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 171 184 3.4E-33 T 14-10-2018 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 8 22 3.4E-33 T 14-10-2018 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 53 62 3.4E-33 T 14-10-2018 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 106 114 3.4E-33 T 14-10-2018 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 126 138 3.4E-33 T 14-10-2018 TMO_1758 b94d5463c2fe220b33ecd9e4ae4bbe20 207 Gene3D G3DSA:3.40.50.880 6 197 3.8E-65 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1700 f9abb2166aa9fe974d47064c240f0c6f 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 111 196 2.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TMO_1700 f9abb2166aa9fe974d47064c240f0c6f 238 SUPERFAMILY SSF56784 20 231 8.13E-40 T 14-10-2018 IPR036412 HAD-like superfamily TMO_1700 f9abb2166aa9fe974d47064c240f0c6f 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 200 1.9E-26 T 14-10-2018 TMO_1700 f9abb2166aa9fe974d47064c240f0c6f 238 Gene3D G3DSA:3.40.50.1000 25 198 3.3E-42 T 14-10-2018 IPR023214 HAD superfamily TMO_1700 f9abb2166aa9fe974d47064c240f0c6f 238 Gene3D G3DSA:1.10.150.730 37 100 3.3E-42 T 14-10-2018 TMO_0736 96df0361012890feec3ce7baf7292c17 189 Pfam PF13560 Helix-turn-helix domain 13 70 3.8E-12 T 14-10-2018 TMO_0736 96df0361012890feec3ce7baf7292c17 189 SMART SM00530 17 72 1.5E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_0736 96df0361012890feec3ce7baf7292c17 189 SUPERFAMILY SSF47413 10 79 4.79E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0736 96df0361012890feec3ce7baf7292c17 189 Gene3D G3DSA:2.60.120.10 79 188 7.4E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_0736 96df0361012890feec3ce7baf7292c17 189 SUPERFAMILY SSF51182 66 188 1.46E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_0736 96df0361012890feec3ce7baf7292c17 189 Gene3D G3DSA:1.10.260.40 1 78 8.1E-16 T 14-10-2018 TMO_1857 3e903c288184203f9111fc19a398a332 656 Pfam PF00593 TonB dependent receptor 256 655 4.2E-47 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_1857 3e903c288184203f9111fc19a398a332 656 SUPERFAMILY SSF56935 46 656 4.58E-120 T 14-10-2018 TMO_1857 3e903c288184203f9111fc19a398a332 656 Gene3D G3DSA:2.40.170.20 192 656 2.2E-99 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_1857 3e903c288184203f9111fc19a398a332 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 180 1.3E-28 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_1857 3e903c288184203f9111fc19a398a332 656 Gene3D G3DSA:2.170.130.10 52 191 4.7E-35 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_1433 2a225a1f3298584c3f076624d0e0fb64 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 292 1.7E-29 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_1433 2a225a1f3298584c3f076624d0e0fb64 297 Gene3D G3DSA:3.30.70.1350 214 295 3.1E-7 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TMO_1433 2a225a1f3298584c3f076624d0e0fb64 297 Gene3D G3DSA:1.20.1510.10 9 213 2.6E-23 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_1433 2a225a1f3298584c3f076624d0e0fb64 297 SUPERFAMILY SSF160240 232 293 5.89E-6 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TMO_1433 2a225a1f3298584c3f076624d0e0fb64 297 Pfam PF01545 Cation efflux family 15 213 4.9E-21 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_1433 2a225a1f3298584c3f076624d0e0fb64 297 SUPERFAMILY SSF161111 9 215 7.32E-26 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_0629 24e5182ff83671bc99b9809e296bf288 603 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 489 597 1.7E-26 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain TMO_0629 24e5182ff83671bc99b9809e296bf288 603 Gene3D G3DSA:1.10.540.10 10 158 6.7E-12 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_0629 24e5182ff83671bc99b9809e296bf288 603 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 48 156 3.2E-8 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_0629 24e5182ff83671bc99b9809e296bf288 603 SUPERFAMILY SSF56645 37 281 1.57E-50 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_0629 24e5182ff83671bc99b9809e296bf288 603 SUPERFAMILY SSF47203 289 460 1.77E-39 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_0629 24e5182ff83671bc99b9809e296bf288 603 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 451 2.5E-17 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_0629 24e5182ff83671bc99b9809e296bf288 603 Gene3D G3DSA:2.40.110.10 160 289 3.4E-26 T 14-10-2018 TMO_0629 24e5182ff83671bc99b9809e296bf288 603 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 8.1E-11 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria TMO_0629 24e5182ff83671bc99b9809e296bf288 603 Gene3D G3DSA:1.20.140.10 290 462 1.3E-41 T 14-10-2018 TMO_0629 24e5182ff83671bc99b9809e296bf288 603 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 269 2.4E-16 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 SUPERFAMILY SSF50494 35 266 5.26E-66 T 14-10-2018 IPR009003 Peptidase S1, PA clan TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 Gene3D G3DSA:2.30.42.10 391 490 3.0E-13 T 14-10-2018 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 PRINTS PR00834 HtrA/DegQ protease family signature 172 196 5.1E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 PRINTS PR00834 HtrA/DegQ protease family signature 228 245 5.1E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 PRINTS PR00834 HtrA/DegQ protease family signature 110 122 5.1E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 PRINTS PR00834 HtrA/DegQ protease family signature 131 151 5.1E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 PRINTS PR00834 HtrA/DegQ protease family signature 206 223 5.1E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 PRINTS PR00834 HtrA/DegQ protease family signature 314 326 5.1E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 SMART SM00228 274 356 5.4E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 SMART SM00228 394 479 6.2E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 Gene3D G3DSA:2.30.42.10 272 373 9.0E-30 T 14-10-2018 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 Pfam PF13180 PDZ domain 274 365 9.8E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 SUPERFAMILY SSF50156 232 356 4.6E-26 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 Pfam PF13365 Trypsin-like peptidase domain 101 235 6.4E-37 T 14-10-2018 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 396 462 1.6E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 37 485 1.6E-150 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 Gene3D G3DSA:2.40.10.120 36 268 5.1E-84 T 14-10-2018 TMO_d0063 1566593c0a12b263aae3a6e6dee5a84e 490 SUPERFAMILY SSF50156 396 488 4.73E-12 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 TMO_2078 3cef1994c9e2f7a38f493e0553cd029d 670 Pfam PF01103 Surface antigen 378 670 3.5E-48 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 TMO_2078 3cef1994c9e2f7a38f493e0553cd029d 670 Gene3D G3DSA:2.40.160.50 354 670 1.1E-86 T 14-10-2018 TMO_2078 3cef1994c9e2f7a38f493e0553cd029d 670 Gene3D G3DSA:3.10.20.310 278 353 3.1E-8 T 14-10-2018 TMO_2078 3cef1994c9e2f7a38f493e0553cd029d 670 Pfam PF07244 Surface antigen variable number repeat 279 351 1.9E-4 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TMO_3195 7734deb23480f411cfeab8f11621200a 289 Pfam PF01063 Amino-transferase class IV 40 262 1.2E-38 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 TMO_3195 7734deb23480f411cfeab8f11621200a 289 Gene3D G3DSA:3.20.10.10 135 287 2.5E-40 T 14-10-2018 TMO_3195 7734deb23480f411cfeab8f11621200a 289 ProSitePatterns PS00770 Aminotransferases class-IV signature. 188 217 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 TMO_3195 7734deb23480f411cfeab8f11621200a 289 Gene3D G3DSA:3.30.470.10 2 131 1.5E-28 T 14-10-2018 TMO_3195 7734deb23480f411cfeab8f11621200a 289 SUPERFAMILY SSF56752 11 286 3.4E-69 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 TMO_c0901 90910b1d7cbeda45818d0af9c2d8dbe8 108 SUPERFAMILY SSF88874 1 58 1.26E-8 T 14-10-2018 TMO_c0901 90910b1d7cbeda45818d0af9c2d8dbe8 108 Gene3D G3DSA:3.90.1340.10 1 20 6.8E-5 T 14-10-2018 IPR037053 Phage tail collar domain superfamily TMO_c0901 90910b1d7cbeda45818d0af9c2d8dbe8 108 Gene3D G3DSA:4.10.1070.10 21 34 6.8E-5 T 14-10-2018 TMO_c0901 90910b1d7cbeda45818d0af9c2d8dbe8 108 Pfam PF07484 Phage Tail Collar Domain 1 22 2.0E-8 T 14-10-2018 IPR011083 Phage tail collar domain TMO_c0198 e527673d1f3b0b96cc9ff3450afa0b2f 460 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0198 e527673d1f3b0b96cc9ff3450afa0b2f 460 SMART SM00345 15 74 1.4E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0198 e527673d1f3b0b96cc9ff3450afa0b2f 460 Gene3D G3DSA:3.90.1150.10 93 446 2.8E-57 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0198 e527673d1f3b0b96cc9ff3450afa0b2f 460 Gene3D G3DSA:1.10.10.10 5 75 1.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0198 e527673d1f3b0b96cc9ff3450afa0b2f 460 Pfam PF00155 Aminotransferase class I and II 94 443 7.7E-16 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_c0198 e527673d1f3b0b96cc9ff3450afa0b2f 460 SUPERFAMILY SSF53383 88 450 1.06E-66 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0198 e527673d1f3b0b96cc9ff3450afa0b2f 460 Gene3D G3DSA:3.40.640.10 131 347 2.8E-57 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0198 e527673d1f3b0b96cc9ff3450afa0b2f 460 SUPERFAMILY SSF46785 7 78 8.51E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0319 b44db1f61761b6dac54fe88753dc4de6 227 SMART SM00882 15 212 8.2E-68 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 TMO_b0319 b44db1f61761b6dac54fe88753dc4de6 227 Gene3D G3DSA:3.40.1080.10 9 224 3.8E-87 T 14-10-2018 TMO_b0319 b44db1f61761b6dac54fe88753dc4de6 227 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 13 218 6.2E-91 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 TMO_b0319 b44db1f61761b6dac54fe88753dc4de6 227 SUPERFAMILY SSF100950 14 225 9.22E-67 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_b0319 b44db1f61761b6dac54fe88753dc4de6 227 Pfam PF01144 Coenzyme A transferase 16 210 1.6E-35 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 TMO_1200 f19353236f6f1aaf9695683d9c4b9f2d 106 Gene3D G3DSA:1.10.3730.20 1 106 2.3E-32 T 14-10-2018 TMO_1200 f19353236f6f1aaf9695683d9c4b9f2d 106 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.3E-28 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 TMO_1200 f19353236f6f1aaf9695683d9c4b9f2d 106 SUPERFAMILY SSF103481 5 101 2.88E-19 T 14-10-2018 TMO_c0201 dfa3b5060106f473b944aedd13af88dd 337 TIGRFAM TIGR04043 rSAM_MSMEG_0568: radical SAM protein, MSMEG_0568 family 1 315 1.3E-160 T 14-10-2018 IPR016779 Radical SAM enzyme, MSMEG0568 TMO_c0201 dfa3b5060106f473b944aedd13af88dd 337 PIRSF PIRSF020870 1 316 7.6E-154 T 14-10-2018 IPR016779 Radical SAM enzyme, MSMEG0568 TMO_c0201 dfa3b5060106f473b944aedd13af88dd 337 SMART SM00729 76 286 2.4E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_c0201 dfa3b5060106f473b944aedd13af88dd 337 Pfam PF04055 Radical SAM superfamily 85 243 5.2E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_c0201 dfa3b5060106f473b944aedd13af88dd 337 SUPERFAMILY SSF102114 63 281 1.9E-29 T 14-10-2018 TMO_c0201 dfa3b5060106f473b944aedd13af88dd 337 Gene3D G3DSA:3.20.20.70 58 295 7.3E-16 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3245 7285d90586f4385ad8196ab99e27d134 359 SUPERFAMILY SSF56112 21 328 2.62E-43 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_3245 7285d90586f4385ad8196ab99e27d134 359 Gene3D G3DSA:3.90.1200.10 102 341 5.8E-74 T 14-10-2018 TMO_3245 7285d90586f4385ad8196ab99e27d134 359 Gene3D G3DSA:3.30.200.20 12 101 7.7E-28 T 14-10-2018 TMO_3245 7285d90586f4385ad8196ab99e27d134 359 Pfam PF01636 Phosphotransferase enzyme family 34 265 3.0E-25 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase TMO_0777 72cd33c9f98bd4d25026b1246bdc9786 167 Pfam PF11776 Nickel/cobalt transporter regulator 116 160 2.2E-7 T 14-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB TMO_0777 72cd33c9f98bd4d25026b1246bdc9786 167 Gene3D G3DSA:3.10.450.160 58 167 5.3E-31 T 14-10-2018 TMO_b0301 4e824d08b99e5381b91ae3ba16cac103 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 170 1.5E-53 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TMO_b0301 4e824d08b99e5381b91ae3ba16cac103 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 320 1.1E-28 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TMO_b0301 4e824d08b99e5381b91ae3ba16cac103 548 Gene3D G3DSA:3.40.50.970 1 177 3.7E-60 T 14-10-2018 TMO_b0301 4e824d08b99e5381b91ae3ba16cac103 548 Gene3D G3DSA:3.40.50.970 354 545 7.8E-52 T 14-10-2018 TMO_b0301 4e824d08b99e5381b91ae3ba16cac103 548 SUPERFAMILY SSF52467 155 331 9.0E-39 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_b0301 4e824d08b99e5381b91ae3ba16cac103 548 Gene3D G3DSA:3.40.50.1220 182 342 1.7E-35 T 14-10-2018 TMO_b0301 4e824d08b99e5381b91ae3ba16cac103 548 SUPERFAMILY SSF52518 2 179 1.77E-50 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_b0301 4e824d08b99e5381b91ae3ba16cac103 548 SUPERFAMILY SSF52518 357 539 3.93E-57 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_b0301 4e824d08b99e5381b91ae3ba16cac103 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 526 2.0E-37 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_b0301 4e824d08b99e5381b91ae3ba16cac103 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TMO_2583 b963b527f0c9b2fc03ce76c932b582fd 336 Gene3D G3DSA:3.40.50.880 1 206 5.9E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_2583 b963b527f0c9b2fc03ce76c932b582fd 336 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 263 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_2583 b963b527f0c9b2fc03ce76c932b582fd 336 SUPERFAMILY SSF46689 228 267 7.53E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2583 b963b527f0c9b2fc03ce76c932b582fd 336 Pfam PF01965 DJ-1/PfpI family 3 177 8.5E-22 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_2583 b963b527f0c9b2fc03ce76c932b582fd 336 Gene3D G3DSA:1.10.10.60 222 322 2.6E-23 T 14-10-2018 TMO_2583 b963b527f0c9b2fc03ce76c932b582fd 336 Pfam PF12833 Helix-turn-helix domain 240 319 3.5E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2583 b963b527f0c9b2fc03ce76c932b582fd 336 SMART SM00342 234 317 3.2E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2583 b963b527f0c9b2fc03ce76c932b582fd 336 SUPERFAMILY SSF46689 270 321 2.29E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2583 b963b527f0c9b2fc03ce76c932b582fd 336 SUPERFAMILY SSF52317 1 198 8.51E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_c0034 84e751d44a25d2b8528c7ab1c48593a9 130 Pfam PF07511 Protein of unknown function (DUF1525) 17 127 1.5E-40 T 14-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 TMO_c0034 84e751d44a25d2b8528c7ab1c48593a9 130 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 17 126 6.2E-42 T 14-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 TMO_2124 e41ae93f1e0392f0bac05cfbb2d51035 234 SUPERFAMILY SSF52833 2 86 1.14E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_2124 e41ae93f1e0392f0bac05cfbb2d51035 234 Gene3D G3DSA:1.20.1050.10 90 198 8.6E-89 T 14-10-2018 TMO_2124 e41ae93f1e0392f0bac05cfbb2d51035 234 Gene3D G3DSA:3.40.30.10 5 207 8.6E-89 T 14-10-2018 TMO_2124 e41ae93f1e0392f0bac05cfbb2d51035 234 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 199 2.1E-14 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal TMO_2124 e41ae93f1e0392f0bac05cfbb2d51035 234 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 83 1.4E-13 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_2124 e41ae93f1e0392f0bac05cfbb2d51035 234 SUPERFAMILY SSF47616 80 207 2.18E-40 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_2815 cd907d9b2d0ed902c73e9c02ef1b5b50 481 SUPERFAMILY SSF111283 30 477 8.37E-128 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TMO_2815 cd907d9b2d0ed902c73e9c02ef1b5b50 481 Pfam PF01523 Putative modulator of DNA gyrase 39 329 1.9E-60 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TMO_2815 cd907d9b2d0ed902c73e9c02ef1b5b50 481 PIRSF PIRSF004919 19 478 3.3E-132 T 14-10-2018 IPR025502 TldD TMO_2815 cd907d9b2d0ed902c73e9c02ef1b5b50 481 Gene3D G3DSA:3.30.2290.10 18 237 1.4E-10 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal TMO_1523 9b978366bcfe9b9b4d27c9338da9baea 239 PIRSF PIRSF009120 1 239 1.9E-97 T 14-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 TMO_1523 9b978366bcfe9b9b4d27c9338da9baea 239 Pfam PF00227 Proteasome subunit 4 195 1.4E-6 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 TMO_1523 9b978366bcfe9b9b4d27c9338da9baea 239 Gene3D G3DSA:3.60.20.10 2 227 9.0E-26 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_1523 9b978366bcfe9b9b4d27c9338da9baea 239 SUPERFAMILY SSF56235 2 237 1.36E-33 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_c0480 f4b9d99582386a4233a945c14b25045b 495 SUPERFAMILY SSF55103 200 469 1.64E-72 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TMO_c0480 f4b9d99582386a4233a945c14b25045b 495 SUPERFAMILY SSF56176 15 227 1.59E-67 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_c0480 f4b9d99582386a4233a945c14b25045b 495 Pfam PF02913 FAD linked oxidases, C-terminal domain 227 467 8.1E-68 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TMO_c0480 f4b9d99582386a4233a945c14b25045b 495 Gene3D G3DSA:3.30.70.2740 347 427 1.1E-5 T 14-10-2018 TMO_c0480 f4b9d99582386a4233a945c14b25045b 495 Gene3D G3DSA:3.30.465.10 106 226 1.2E-38 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TMO_c0480 f4b9d99582386a4233a945c14b25045b 495 Gene3D G3DSA:1.10.45.10 428 468 1.1E-11 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 TMO_c0480 f4b9d99582386a4233a945c14b25045b 495 Gene3D G3DSA:3.30.43.10 7 104 3.6E-24 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 TMO_c0480 f4b9d99582386a4233a945c14b25045b 495 Pfam PF01565 FAD binding domain 54 191 3.7E-38 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TMO_0624 f6282fd94943d5386722c9c1ffbe81f1 64 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 20 64 5.0E-11 T 14-10-2018 TMO_0624 f6282fd94943d5386722c9c1ffbe81f1 64 Pfam PF13617 YnbE-like lipoprotein 9 61 1.6E-25 T 14-10-2018 IPR025985 YnbE-like lipoprotein TMO_1022 e3e17a1df009b14d28c2532e71280221 265 Pfam PF02634 FdhD/NarQ family 23 259 9.2E-70 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 TMO_1022 e3e17a1df009b14d28c2532e71280221 265 PIRSF PIRSF015626 6 262 4.5E-73 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 TMO_1022 e3e17a1df009b14d28c2532e71280221 265 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 259 3.2E-50 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 TMO_1022 e3e17a1df009b14d28c2532e71280221 265 Gene3D G3DSA:3.10.20.10 24 109 9.4E-8 T 14-10-2018 TMO_1022 e3e17a1df009b14d28c2532e71280221 265 SUPERFAMILY SSF53927 6 259 2.32E-71 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TMO_1022 e3e17a1df009b14d28c2532e71280221 265 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 1 260 29.232 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 TMO_1022 e3e17a1df009b14d28c2532e71280221 265 Gene3D G3DSA:3.40.140.10 112 264 3.6E-44 T 14-10-2018 TMO_2745 5d105a1c09a9210bcc01893fed67c137 123 Gene3D G3DSA:1.10.3680.10 1 107 6.7E-11 T 14-10-2018 IPR029024 TerB-like TMO_2745 5d105a1c09a9210bcc01893fed67c137 123 SUPERFAMILY SSF158682 1 113 8.89E-8 T 14-10-2018 IPR029024 TerB-like TMO_c0187 0f9041e96ace0678ab1bc167343df001 638 PIRSF PIRSF001589 62 376 3.7E-30 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_c0187 0f9041e96ace0678ab1bc167343df001 638 PIRSF PIRSF001589 485 619 9.5E-6 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_c0187 0f9041e96ace0678ab1bc167343df001 638 Pfam PF00733 Asparagine synthase 360 610 8.8E-12 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_c0187 0f9041e96ace0678ab1bc167343df001 638 Pfam PF00733 Asparagine synthase 235 286 2.0E-7 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_c0187 0f9041e96ace0678ab1bc167343df001 638 SUPERFAMILY SSF52402 212 597 1.77E-25 T 14-10-2018 TMO_c0187 0f9041e96ace0678ab1bc167343df001 638 Gene3D G3DSA:3.60.20.10 27 217 3.9E-25 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_c0187 0f9041e96ace0678ab1bc167343df001 638 SUPERFAMILY SSF56235 59 217 1.29E-27 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_c0187 0f9041e96ace0678ab1bc167343df001 638 Gene3D G3DSA:3.40.50.620 223 462 1.0E-14 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_c0187 0f9041e96ace0678ab1bc167343df001 638 Gene3D G3DSA:3.40.50.620 472 588 1.1E-8 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_c0187 0f9041e96ace0678ab1bc167343df001 638 Pfam PF13537 Glutamine amidotransferase domain 68 160 5.4E-14 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 3.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 250 9.7E-54 T 14-10-2018 TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 Gene3D G3DSA:3.40.50.720 10 251 3.6E-74 T 14-10-2018 TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 SUPERFAMILY SSF51735 11 251 3.38E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0295 15acdb1226bf873f6e2d6ef2765e9c77 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1843 22c37004028eb563cba0f5e5ba078977 637 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1843 22c37004028eb563cba0f5e5ba078977 637 Gene3D G3DSA:3.40.50.300 276 552 8.1E-55 T 14-10-2018 TMO_1843 22c37004028eb563cba0f5e5ba078977 637 Pfam PF00005 ABC transporter 329 460 2.8E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1843 22c37004028eb563cba0f5e5ba078977 637 Pfam PF00005 ABC transporter 19 178 2.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1843 22c37004028eb563cba0f5e5ba078977 637 Gene3D G3DSA:3.40.50.300 5 275 1.9E-62 T 14-10-2018 TMO_1843 22c37004028eb563cba0f5e5ba078977 637 SUPERFAMILY SSF52540 2 243 8.04E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1843 22c37004028eb563cba0f5e5ba078977 637 ProSitePatterns PS00211 ABC transporters family signature. 432 446 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1843 22c37004028eb563cba0f5e5ba078977 637 SMART SM00382 338 505 6.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1843 22c37004028eb563cba0f5e5ba078977 637 SMART SM00382 26 223 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1843 22c37004028eb563cba0f5e5ba078977 637 Pfam PF12848 ABC transporter 217 292 2.8E-25 T 14-10-2018 IPR032781 ABC-transporter extension domain TMO_1843 22c37004028eb563cba0f5e5ba078977 637 SUPERFAMILY SSF52540 298 510 7.39E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0338 c50239da7f4e2289e541fa045f6b611a 254 Gene3D G3DSA:3.40.50.360 5 252 1.0E-80 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_c0338 c50239da7f4e2289e541fa045f6b611a 254 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 17 234 1.3E-115 T 14-10-2018 IPR014063 Arsenate resistance ArsH TMO_c0338 c50239da7f4e2289e541fa045f6b611a 254 SUPERFAMILY SSF52218 10 235 8.78E-62 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_c0338 c50239da7f4e2289e541fa045f6b611a 254 Pfam PF03358 NADPH-dependent FMN reductase 41 187 7.8E-27 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TMO_0724 91a03f232ac07613297dccf15bf6f5a7 106 Pfam PF03831 PhnA domain 39 105 9.5E-30 T 14-10-2018 IPR013988 PhnA protein, C-terminal TMO_0724 91a03f232ac07613297dccf15bf6f5a7 106 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 6 105 1.8E-23 T 14-10-2018 IPR004624 PhnA protein TMO_0724 91a03f232ac07613297dccf15bf6f5a7 106 SUPERFAMILY SSF82057 36 105 2.61E-25 T 14-10-2018 TMO_0724 91a03f232ac07613297dccf15bf6f5a7 106 Gene3D G3DSA:2.30.30.40 36 106 4.9E-32 T 14-10-2018 TMO_2316 e26d05cf3e362c1dc937ce85b519ea46 277 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 23 270 2.7E-60 T 14-10-2018 IPR011928 Bacteriophage phiJL001, Gp84 TMO_2316 e26d05cf3e362c1dc937ce85b519ea46 277 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 1 163 3.2E-51 T 14-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal TMO_2316 e26d05cf3e362c1dc937ce85b519ea46 277 Pfam PF09356 Phage conserved hypothetical protein BR0599 194 270 3.1E-23 T 14-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal TMO_c0341 f888c70ae81b3575e1a5eb03fb6f4380 355 Gene3D G3DSA:1.10.10.60 240 348 8.8E-25 T 14-10-2018 TMO_c0341 f888c70ae81b3575e1a5eb03fb6f4380 355 Pfam PF12833 Helix-turn-helix domain 267 345 2.4E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0341 f888c70ae81b3575e1a5eb03fb6f4380 355 SUPERFAMILY SSF46689 298 348 3.85E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0341 f888c70ae81b3575e1a5eb03fb6f4380 355 SMART SM00342 261 344 1.6E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 30 53 2.0E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 353 376 2.0E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 353 2.0E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 397 412 2.0E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 72 92 2.0E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 296 317 2.0E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 412 432 2.0E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 Pfam PF13437 HlyD family secretion protein 284 381 3.5E-16 T 14-10-2018 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 Gene3D G3DSA:2.40.50.100 59 93 2.2E-9 T 14-10-2018 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 SUPERFAMILY SSF111369 52 120 2.35E-5 T 14-10-2018 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 Pfam PF13533 Biotin-lipoyl like 61 96 3.0E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 Gene3D G3DSA:1.10.287.470 94 121 2.2E-9 T 14-10-2018 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 23 433 9.4E-110 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 TMO_1066 3bd44431c8fc550e459caefd4aef223f 433 ProSitePatterns PS00543 HlyD family secretion proteins signature. 397 419 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 TMO_0128 2422152efcc84322bea49207f9f720f5 419 SUPERFAMILY SSF51419 26 282 2.36E-82 T 14-10-2018 IPR029066 PLP-binding barrel TMO_0128 2422152efcc84322bea49207f9f720f5 419 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 371 2.5E-27 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 TMO_0128 2422152efcc84322bea49207f9f720f5 419 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 279 3.0E-62 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 TMO_0128 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 2.7E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_0128 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 2.7E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_0128 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 2.7E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_0128 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 381 403 2.7E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_0128 2422152efcc84322bea49207f9f720f5 419 Gene3D G3DSA:2.40.37.10 16 410 6.8E-154 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TMO_0128 2422152efcc84322bea49207f9f720f5 419 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 413 1.2E-147 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_0128 2422152efcc84322bea49207f9f720f5 419 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 414 41.447 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_0128 2422152efcc84322bea49207f9f720f5 419 SUPERFAMILY SSF50621 253 417 1.42E-55 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TMO_0128 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 6.8E-23 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_0128 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 6.8E-23 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_0128 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 6.8E-23 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_0128 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 6.8E-23 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_0128 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 371 384 6.8E-23 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TMO_0128 2422152efcc84322bea49207f9f720f5 419 Gene3D G3DSA:3.20.20.10 34 275 6.8E-154 T 14-10-2018 IPR029066 PLP-binding barrel TMO_0128 2422152efcc84322bea49207f9f720f5 419 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site TMO_c0787 280b98c961d9775d69033f101c9ce4e1 122 SMART SM00530 18 74 9.5E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0787 280b98c961d9775d69033f101c9ce4e1 122 SUPERFAMILY SSF47413 14 91 4.12E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_c0787 280b98c961d9775d69033f101c9ce4e1 122 Gene3D G3DSA:1.10.260.40 8 88 1.9E-24 T 14-10-2018 TMO_c0787 280b98c961d9775d69033f101c9ce4e1 122 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 11 88 1.6E-23 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TMO_c0787 280b98c961d9775d69033f101c9ce4e1 122 Pfam PF01381 Helix-turn-helix 29 73 4.1E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0735 3c235613090c81a7de2fcfcf738c49e0 483 Pfam PF04317 YcjX-like family, DUF463 37 482 3.1E-150 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein TMO_c0735 3c235613090c81a7de2fcfcf738c49e0 483 PIRSF PIRSF019381 12 483 2.3E-140 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 SUPERFAMILY SSF51735 1 251 4.25E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 1.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 Gene3D G3DSA:3.40.50.720 1 256 4.2E-62 T 14-10-2018 TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 Pfam PF00106 short chain dehydrogenase 6 195 7.1E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1296 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2158 1e7b329d3b8877336b20402f2f203f3e 909 Gene3D G3DSA:3.40.50.300 1 238 2.5E-59 T 14-10-2018 TMO_2158 1e7b329d3b8877336b20402f2f203f3e 909 SUPERFAMILY SSF52540 4 231 8.77E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2158 1e7b329d3b8877336b20402f2f203f3e 909 SMART SM00382 29 217 4.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2158 1e7b329d3b8877336b20402f2f203f3e 909 SMART SM00382 294 485 1.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2158 1e7b329d3b8877336b20402f2f203f3e 909 SUPERFAMILY SSF52540 269 490 8.88E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2158 1e7b329d3b8877336b20402f2f203f3e 909 Pfam PF00005 ABC transporter 20 167 1.9E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2158 1e7b329d3b8877336b20402f2f203f3e 909 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2158 1e7b329d3b8877336b20402f2f203f3e 909 Gene3D G3DSA:3.40.50.300 261 509 1.1E-65 T 14-10-2018 TMO_2158 1e7b329d3b8877336b20402f2f203f3e 909 Pfam PF12698 ABC-2 family transporter protein 565 899 1.7E-36 T 14-10-2018 TMO_2158 1e7b329d3b8877336b20402f2f203f3e 909 Pfam PF00005 ABC transporter 286 429 7.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 188 8.3E-4 T 14-10-2018 TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 Gene3D G3DSA:3.40.50.720 1 248 1.9E-74 T 14-10-2018 TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 SUPERFAMILY SSF51735 10 248 1.22E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 9.6E-61 T 14-10-2018 TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0537 e1d9d833dd9419ab4f88ea184d885ebf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1035 c7f3c8d27055a9fcbb059d214b8861aa 240 Gene3D G3DSA:3.90.870.10 1 215 4.4E-45 T 14-10-2018 TMO_1035 c7f3c8d27055a9fcbb059d214b8861aa 240 SUPERFAMILY SSF55821 4 214 8.55E-38 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TMO_1035 c7f3c8d27055a9fcbb059d214b8861aa 240 Pfam PF01300 Telomere recombination 17 199 2.9E-32 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 TMO_2326 4a01fee66f08e161d0f1c3aa9b63e6ef 468 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 335 451 6.3E-21 T 14-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit TMO_2326 4a01fee66f08e161d0f1c3aa9b63e6ef 468 Pfam PF17289 Terminase RNaseH-like domain 309 451 8.7E-9 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like TMO_1533 b622b12ab8c76656dc40133b0b4ea282 351 SUPERFAMILY SSF53850 37 347 4.42E-84 T 14-10-2018 TMO_1533 b622b12ab8c76656dc40133b0b4ea282 351 Gene3D G3DSA:3.40.190.10 39 314 1.8E-132 T 14-10-2018 TMO_1533 b622b12ab8c76656dc40133b0b4ea282 351 PIRSF PIRSF002825 14 351 4.8E-97 T 14-10-2018 IPR026045 Ferric binding protein TMO_1533 b622b12ab8c76656dc40133b0b4ea282 351 Pfam PF13343 Bacterial extracellular solute-binding protein 84 313 7.7E-28 T 14-10-2018 TMO_1533 b622b12ab8c76656dc40133b0b4ea282 351 Gene3D G3DSA:3.40.190.10 137 349 1.8E-132 T 14-10-2018 TMO_d0064 96203e8a58b4b133069e1863d5ef6799 336 SUPERFAMILY SSF51430 1 334 3.54E-98 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_d0064 96203e8a58b4b133069e1863d5ef6799 336 Pfam PF00248 Aldo/keto reductase family 15 327 1.1E-69 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_d0064 96203e8a58b4b133069e1863d5ef6799 336 Gene3D G3DSA:3.20.20.100 1 336 2.0E-110 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_0633 db7c9b7e010bd521b0c71c0a98a10bc8 234 SMART SM00382 29 211 4.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0633 db7c9b7e010bd521b0c71c0a98a10bc8 234 Gene3D G3DSA:3.40.50.300 1 234 7.8E-62 T 14-10-2018 TMO_0633 db7c9b7e010bd521b0c71c0a98a10bc8 234 Pfam PF00005 ABC transporter 20 162 3.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0633 db7c9b7e010bd521b0c71c0a98a10bc8 234 SUPERFAMILY SSF52540 3 226 6.39E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0633 db7c9b7e010bd521b0c71c0a98a10bc8 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0872 e3b0497e784d3ac2d5d394532db33c84 405 Gene3D G3DSA:1.10.287.130 146 249 7.7E-22 T 14-10-2018 TMO_c0872 e3b0497e784d3ac2d5d394532db33c84 405 SUPERFAMILY SSF47384 176 252 1.29E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0872 e3b0497e784d3ac2d5d394532db33c84 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 294 403 4.4E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0872 e3b0497e784d3ac2d5d394532db33c84 405 SMART SM00388 182 251 7.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0872 e3b0497e784d3ac2d5d394532db33c84 405 SMART SM00387 294 405 4.1E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0872 e3b0497e784d3ac2d5d394532db33c84 405 Gene3D G3DSA:3.30.565.10 252 403 2.0E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0872 e3b0497e784d3ac2d5d394532db33c84 405 SUPERFAMILY SSF55874 240 404 1.31E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0872 e3b0497e784d3ac2d5d394532db33c84 405 Pfam PF00512 His Kinase A (phospho-acceptor) domain 182 251 5.2E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_3434 8033a75018ca6809ba9d5be857f715cd 262 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 130 152 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_3434 8033a75018ca6809ba9d5be857f715cd 262 Pfam PF01066 CDP-alcohol phosphatidyltransferase 78 151 1.6E-8 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_3434 8033a75018ca6809ba9d5be857f715cd 262 Gene3D G3DSA:1.20.120.1760 62 190 3.0E-6 T 14-10-2018 TMO_2863 59235a28eb1294d9459ee7f3b86c0d84 219 Gene3D G3DSA:1.10.3720.10 3 218 8.1E-56 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2863 59235a28eb1294d9459ee7f3b86c0d84 219 SUPERFAMILY SSF161098 14 201 6.28E-43 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2863 59235a28eb1294d9459ee7f3b86c0d84 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 216 7.0E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2863 59235a28eb1294d9459ee7f3b86c0d84 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 110 1.3E-20 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_3543 9e94814f11db9fdaff8a2e48c8842a3d 149 Pfam PF02033 Ribosome-binding factor A 14 121 6.0E-24 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TMO_3543 9e94814f11db9fdaff8a2e48c8842a3d 149 ProSitePatterns PS01319 Ribosome-binding factor A signature. 87 108 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 TMO_3543 9e94814f11db9fdaff8a2e48c8842a3d 149 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 13 121 23.997 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TMO_3543 9e94814f11db9fdaff8a2e48c8842a3d 149 SUPERFAMILY SSF89919 10 123 1.57E-29 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily TMO_3543 9e94814f11db9fdaff8a2e48c8842a3d 149 Gene3D G3DSA:3.30.300.20 10 116 3.4E-22 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_3543 9e94814f11db9fdaff8a2e48c8842a3d 149 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 17 108 6.0E-21 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 SUPERFAMILY SSF52440 1 113 6.04E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.1E-45 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 SUPERFAMILY SSF51569 683 978 1.76E-76 T 14-10-2018 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 SUPERFAMILY SSF51246 335 450 5.23E-43 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 SUPERFAMILY SSF56059 115 331 5.66E-66 T 14-10-2018 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 916 925 - T 14-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 SMART SM00878 340 446 1.7E-62 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 326 4.5E-74 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 Pfam PF02785 Biotin carboxylase C-terminal domain 340 447 4.8E-41 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 Gene3D G3DSA:3.30.470.130 1 453 9.5E-204 T 14-10-2018 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 Pfam PF00682 HMGL-like 690 959 1.7E-58 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_2573 3d416a2a98d3f1f577e17eb30fc1910f 986 Gene3D G3DSA:3.20.20.70 682 983 9.9E-140 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2802 948d6ab98f9c294ae5d21ffdb632362f 114 Gene3D G3DSA:3.30.110.40 33 112 9.6E-27 T 14-10-2018 IPR036868 TusA-like domain superfamily TMO_2802 948d6ab98f9c294ae5d21ffdb632362f 114 SUPERFAMILY SSF64307 41 111 1.29E-22 T 14-10-2018 IPR036868 TusA-like domain superfamily TMO_2802 948d6ab98f9c294ae5d21ffdb632362f 114 Pfam PF01206 Sulfurtransferase TusA 42 110 2.0E-21 T 14-10-2018 IPR001455 TusA-like domain TMO_2802 948d6ab98f9c294ae5d21ffdb632362f 114 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 43 67 - T 14-10-2018 IPR001455 TusA-like domain TMO_c0637 ffdb284fd5eb9391884b8246587e1712 152 SUPERFAMILY SSF51316 3 132 1.78E-37 T 14-10-2018 IPR011057 Mss4-like superfamily TMO_c0637 ffdb284fd5eb9391884b8246587e1712 152 Gene3D G3DSA:3.90.1590.10 2 101 1.9E-13 T 14-10-2018 TMO_c0637 ffdb284fd5eb9391884b8246587e1712 152 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 113 2.1E-20 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 TMO_c0732 d2d89ac277a2d45f5449014fe8f0a400 160 SUPERFAMILY SSF51230 85 160 1.83E-23 T 14-10-2018 IPR011053 Single hybrid motif TMO_c0732 d2d89ac277a2d45f5449014fe8f0a400 160 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 116 133 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TMO_c0732 d2d89ac277a2d45f5449014fe8f0a400 160 Gene3D G3DSA:2.40.50.100 84 160 5.7E-29 T 14-10-2018 TMO_c0732 d2d89ac277a2d45f5449014fe8f0a400 160 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 14 160 7.0E-39 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TMO_c0732 d2d89ac277a2d45f5449014fe8f0a400 160 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 89 102 3.2E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TMO_c0732 d2d89ac277a2d45f5449014fe8f0a400 160 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 106 120 3.2E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TMO_c0732 d2d89ac277a2d45f5449014fe8f0a400 160 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 121 134 3.2E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TMO_c0732 d2d89ac277a2d45f5449014fe8f0a400 160 Pfam PF00364 Biotin-requiring enzyme 87 159 2.9E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_0863 96b90e011cd58a9feb7e7bd159b2a215 326 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 38 291 4.1E-50 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TMO_0863 96b90e011cd58a9feb7e7bd159b2a215 326 SUPERFAMILY SSF53822 39 256 1.67E-15 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_0863 96b90e011cd58a9feb7e7bd159b2a215 326 Gene3D G3DSA:3.40.50.2300 45 296 1.5E-72 T 14-10-2018 TMO_0863 96b90e011cd58a9feb7e7bd159b2a215 326 Gene3D G3DSA:3.40.50.2300 139 322 1.5E-72 T 14-10-2018 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 203 437 1.8E-26 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 SUPERFAMILY SSF50022 25 174 4.98E-42 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 Gene3D G3DSA:3.90.380.10 32 437 4.6E-139 T 14-10-2018 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 158 184 1.3E-52 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 71 86 1.3E-52 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 199 221 1.3E-52 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 41 66 1.3E-52 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 92 112 1.3E-52 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 114 134 1.3E-52 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 Pfam PF00355 Rieske [2Fe-2S] domain 57 136 4.8E-17 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 SUPERFAMILY SSF55961 174 447 3.77E-64 T 14-10-2018 TMO_b0117 2774f7828be51d0a4cd6fbc0dc588754 462 Gene3D G3DSA:2.102.10.10 56 186 4.6E-139 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_3220 fef9f5491f5c002c993c42e39b6886f6 214 Gene3D G3DSA:3.40.50.300 3 214 3.9E-65 T 14-10-2018 TMO_3220 fef9f5491f5c002c993c42e39b6886f6 214 SUPERFAMILY SSF52540 8 213 1.26E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3220 fef9f5491f5c002c993c42e39b6886f6 214 Hamap MF_00238 Cytidylate kinase [cmk]. 9 214 30.846 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TMO_3220 fef9f5491f5c002c993c42e39b6886f6 214 TIGRFAM TIGR00017 cmk: cytidylate kinase 9 208 5.2E-50 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TMO_3220 fef9f5491f5c002c993c42e39b6886f6 214 Pfam PF02224 Cytidylate kinase 11 210 4.1E-54 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TMO_1145 40d70a6b580d8380451c2db76f2e929f 236 SUPERFAMILY SSF52833 1 84 9.68E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_1145 40d70a6b580d8380451c2db76f2e929f 236 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 81 3.0E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_1145 40d70a6b580d8380451c2db76f2e929f 236 Gene3D G3DSA:3.40.30.10 2 203 1.7E-80 T 14-10-2018 TMO_1145 40d70a6b580d8380451c2db76f2e929f 236 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 197 3.5E-10 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal TMO_1145 40d70a6b580d8380451c2db76f2e929f 236 Gene3D G3DSA:1.20.1050.10 88 196 1.7E-80 T 14-10-2018 TMO_1145 40d70a6b580d8380451c2db76f2e929f 236 SUPERFAMILY SSF47616 78 211 9.55E-37 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_c0375 879dce73d0ae19f49b2ce293113633c2 486 Pfam PF01979 Amidohydrolase family 50 437 3.0E-34 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_c0375 879dce73d0ae19f49b2ce293113633c2 486 SUPERFAMILY SSF51556 54 383 1.18E-109 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_c0375 879dce73d0ae19f49b2ce293113633c2 486 SUPERFAMILY SSF51338 346 458 9.26E-39 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_c0375 879dce73d0ae19f49b2ce293113633c2 486 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 455 5.3E-178 T 14-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 TMO_c0375 879dce73d0ae19f49b2ce293113633c2 486 Gene3D G3DSA:3.20.20.140 54 424 2.1E-197 T 14-10-2018 TMO_c0375 879dce73d0ae19f49b2ce293113633c2 486 Gene3D G3DSA:2.30.40.10 3 461 2.1E-197 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_c0375 879dce73d0ae19f49b2ce293113633c2 486 SUPERFAMILY SSF51338 1 66 3.32E-16 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_b0369 3fceade55d60ae0ceb38d9a9081f2039 216 Gene3D G3DSA:1.10.10.10 10 81 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0369 3fceade55d60ae0ceb38d9a9081f2039 216 SUPERFAMILY SSF46785 16 88 1.53E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0369 3fceade55d60ae0ceb38d9a9081f2039 216 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 84 4.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0369 3fceade55d60ae0ceb38d9a9081f2039 216 Gene3D G3DSA:3.40.1410.10 82 215 4.4E-8 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_b0369 3fceade55d60ae0ceb38d9a9081f2039 216 SMART SM00345 25 84 5.4E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0369 3fceade55d60ae0ceb38d9a9081f2039 216 SUPERFAMILY SSF64288 72 213 4.4E-13 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily TMO_2533 ce339f6e98e31511f2021bc560bf46e7 391 Gene3D G3DSA:3.40.190.10 45 334 2.2E-52 T 14-10-2018 TMO_2533 ce339f6e98e31511f2021bc560bf46e7 391 SUPERFAMILY SSF53850 39 343 9.45E-56 T 14-10-2018 TMO_2533 ce339f6e98e31511f2021bc560bf46e7 391 Pfam PF13416 Bacterial extracellular solute-binding protein 63 336 3.0E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_2533 ce339f6e98e31511f2021bc560bf46e7 391 Gene3D G3DSA:3.40.190.10 151 289 2.2E-52 T 14-10-2018 TMO_1842 892b97fc83c1e2d129f3503fd64afd61 140 Pfam PF00334 Nucleoside diphosphate kinase 4 138 5.6E-55 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_1842 892b97fc83c1e2d129f3503fd64afd61 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.4E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_1842 892b97fc83c1e2d129f3503fd64afd61 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.4E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_1842 892b97fc83c1e2d129f3503fd64afd61 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.4E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_1842 892b97fc83c1e2d129f3503fd64afd61 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.4E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_1842 892b97fc83c1e2d129f3503fd64afd61 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.4E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_1842 892b97fc83c1e2d129f3503fd64afd61 140 SUPERFAMILY SSF54919 1 139 3.54E-56 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_1842 892b97fc83c1e2d129f3503fd64afd61 140 Gene3D G3DSA:3.30.70.141 1 139 1.8E-55 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_1842 892b97fc83c1e2d129f3503fd64afd61 140 SMART SM00562 3 140 1.0E-86 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_1842 892b97fc83c1e2d129f3503fd64afd61 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.276 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_a0219 8fdd53babd11f9eeb7755797af4e9035 264 Gene3D G3DSA:3.30.70.1020 97 167 1.0E-43 T 14-10-2018 TMO_a0219 8fdd53babd11f9eeb7755797af4e9035 264 Pfam PF02358 Trehalose-phosphatase 18 218 1.4E-37 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 TMO_a0219 8fdd53babd11f9eeb7755797af4e9035 264 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 16 248 4.6E-41 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 TMO_a0219 8fdd53babd11f9eeb7755797af4e9035 264 SUPERFAMILY SSF56784 16 249 1.09E-32 T 14-10-2018 IPR036412 HAD-like superfamily TMO_a0219 8fdd53babd11f9eeb7755797af4e9035 264 Gene3D G3DSA:3.40.50.1000 17 217 1.0E-43 T 14-10-2018 IPR023214 HAD superfamily TMO_0460 53fcba27c708a3e8aa9fd8461cea6bcf 274 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 116 255 2.6E-20 T 14-10-2018 IPR019262 Domain of unknown function DUF2272 TMO_1810 1bc43170503ec4435decd0bc84c76db6 325 SUPERFAMILY SSF53901 6 325 6.12E-75 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1810 1bc43170503ec4435decd0bc84c76db6 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 325 73.132 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TMO_1810 1bc43170503ec4435decd0bc84c76db6 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 325 3.9E-131 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TMO_1810 1bc43170503ec4435decd0bc84c76db6 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 325 6.0E-37 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TMO_1810 1bc43170503ec4435decd0bc84c76db6 325 Gene3D G3DSA:3.40.47.10 1 325 6.2E-130 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1810 1bc43170503ec4435decd0bc84c76db6 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 192 3.2E-32 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TMO_c0334 a5a0e8df5acd46e705472277025bd150 493 SMART SM00345 24 83 1.8E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0334 a5a0e8df5acd46e705472277025bd150 493 Gene3D G3DSA:3.40.640.10 153 371 3.8E-57 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0334 a5a0e8df5acd46e705472277025bd150 493 Gene3D G3DSA:3.90.1150.10 116 478 3.8E-57 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0334 a5a0e8df5acd46e705472277025bd150 493 Pfam PF00155 Aminotransferase class I and II 119 476 8.4E-24 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_c0334 a5a0e8df5acd46e705472277025bd150 493 Gene3D G3DSA:1.10.10.10 20 92 3.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0334 a5a0e8df5acd46e705472277025bd150 493 SUPERFAMILY SSF46785 16 87 1.11E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0334 a5a0e8df5acd46e705472277025bd150 493 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 7.0E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0334 a5a0e8df5acd46e705472277025bd150 493 SUPERFAMILY SSF53383 109 481 1.31E-66 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_b0012 52cfcee868d3172936bff5a7d5dd4551 282 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 9 120 1.7E-31 T 14-10-2018 IPR006521 Tail protein I TMO_b0012 52cfcee868d3172936bff5a7d5dd4551 282 Pfam PF09684 Phage tail protein (Tail_P2_I) 10 153 2.1E-36 T 14-10-2018 IPR006521 Tail protein I TMO_2137 e5a9abebeaaba8664237b5c4d576051d 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 525 4.6E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2137 e5a9abebeaaba8664237b5c4d576051d 560 SUPERFAMILY SSF58104 240 553 2.09E-58 T 14-10-2018 TMO_2137 e5a9abebeaaba8664237b5c4d576051d 560 Gene3D G3DSA:3.30.450.20 32 188 3.9E-33 T 14-10-2018 TMO_2137 e5a9abebeaaba8664237b5c4d576051d 560 SMART SM00283 300 554 2.6E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2137 e5a9abebeaaba8664237b5c4d576051d 560 Gene3D G3DSA:1.10.287.950 268 554 1.4E-51 T 14-10-2018 TMO_2137 e5a9abebeaaba8664237b5c4d576051d 560 Gene3D G3DSA:1.10.8.500 212 263 1.8E-6 T 14-10-2018 TMO_2137 e5a9abebeaaba8664237b5c4d576051d 560 Pfam PF17200 Single Cache domain 2 39 186 2.8E-25 T 14-10-2018 IPR033480 Single Cache domain 2 TMO_2137 e5a9abebeaaba8664237b5c4d576051d 560 SMART SM01049 33 128 1.6E-24 T 14-10-2018 IPR033480 Single Cache domain 2 TMO_c0757 e69494c6e189369c31abb83ecbcf6e49 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 116 6.6E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_c0757 e69494c6e189369c31abb83ecbcf6e49 124 SUPERFAMILY SSF54593 3 121 2.61E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_c0757 e69494c6e189369c31abb83ecbcf6e49 124 Gene3D G3DSA:3.30.720.120 2 54 3.7E-23 T 14-10-2018 TMO_c0757 e69494c6e189369c31abb83ecbcf6e49 124 PIRSF PIRSF039020 2 122 2.1E-43 T 14-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR TMO_c0757 e69494c6e189369c31abb83ecbcf6e49 124 Gene3D G3DSA:3.30.720.110 67 123 8.5E-24 T 14-10-2018 TMO_2311 ea65dac7ad4b69e4f7bab5ec91726bd1 431 PIRSF PIRSF006066 6 431 1.3E-86 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_2311 ea65dac7ad4b69e4f7bab5ec91726bd1 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 422 9.6E-88 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_2311 ea65dac7ad4b69e4f7bab5ec91726bd1 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 428 1.1E-87 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_a0218 a6236bba55931e39fb1a86ad10c71bf6 268 SUPERFAMILY SSF55961 59 201 4.72E-21 T 14-10-2018 TMO_a0218 a6236bba55931e39fb1a86ad10c71bf6 268 Gene3D G3DSA:3.30.530.20 55 205 2.9E-38 T 14-10-2018 IPR023393 START-like domain superfamily TMO_a0218 a6236bba55931e39fb1a86ad10c71bf6 268 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 65 179 6.4E-12 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 TMO_0609 31bc9d055555ef2569f0652486f5fb04 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 298 39.436 T 14-10-2018 IPR033752 MetA family TMO_0609 31bc9d055555ef2569f0652486f5fb04 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 300 3.8E-101 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 TMO_0609 31bc9d055555ef2569f0652486f5fb04 313 Gene3D G3DSA:3.40.50.880 1 300 5.2E-113 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_0609 31bc9d055555ef2569f0652486f5fb04 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 292 4.0E-110 T 14-10-2018 TMO_0609 31bc9d055555ef2569f0652486f5fb04 313 Pfam PF04204 Homoserine O-succinyltransferase 2 298 1.4E-121 T 14-10-2018 IPR033752 MetA family TMO_0609 31bc9d055555ef2569f0652486f5fb04 313 SUPERFAMILY SSF52317 18 296 8.25E-96 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_0609 31bc9d055555ef2569f0652486f5fb04 313 PIRSF PIRSF000450 1 308 1.4E-128 T 14-10-2018 IPR033752 MetA family TMO_b0597 df1903cbec2947f797775ae12c5bbafb 367 Pfam PF01757 Acyltransferase family 11 334 8.9E-11 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 TMO_2489 b7e00a256ae6a59a6ac8b877b74ec28f 196 Pfam PF13410 Glutathione S-transferase, C-terminal domain 98 164 1.7E-9 T 14-10-2018 TMO_2489 b7e00a256ae6a59a6ac8b877b74ec28f 196 Pfam PF13417 Glutathione S-transferase, N-terminal domain 2 55 1.4E-9 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_2489 b7e00a256ae6a59a6ac8b877b74ec28f 196 SUPERFAMILY SSF52833 1 68 3.08E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_2489 b7e00a256ae6a59a6ac8b877b74ec28f 196 Gene3D G3DSA:3.40.30.10 1 62 1.3E-15 T 14-10-2018 TMO_2489 b7e00a256ae6a59a6ac8b877b74ec28f 196 SUPERFAMILY SSF47616 53 177 2.95E-30 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_2489 b7e00a256ae6a59a6ac8b877b74ec28f 196 Gene3D G3DSA:1.20.1050.10 63 186 9.7E-24 T 14-10-2018 TMO_c0146 4def0570a8e7c9cf7f65229d0df65154 141 TIGRFAM TIGR01841 phasin: phasin family protein 49 135 1.4E-21 T 14-10-2018 IPR010127 Phasin, subfamily 1 TMO_c0146 4def0570a8e7c9cf7f65229d0df65154 141 Pfam PF09361 Phasin protein 28 127 1.7E-21 T 14-10-2018 IPR018968 Phasin TMO_c0417 74dc3e1ac2290ea7edfcb104db3a91fe 706 SUPERFAMILY SSF56935 39 706 1.34E-85 T 14-10-2018 TMO_c0417 74dc3e1ac2290ea7edfcb104db3a91fe 706 Pfam PF00593 TonB dependent receptor 272 703 1.5E-43 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_c0417 74dc3e1ac2290ea7edfcb104db3a91fe 706 Gene3D G3DSA:2.40.170.20 49 706 1.6E-118 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_3471 1f6899a5d0f39686c0fa55920969f4e4 325 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 42.231 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 TMO_3471 1f6899a5d0f39686c0fa55920969f4e4 325 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 2.8E-9 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_3471 1f6899a5d0f39686c0fa55920969f4e4 325 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site TMO_3471 1f6899a5d0f39686c0fa55920969f4e4 325 Gene3D G3DSA:3.30.230.70 10 237 9.1E-56 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_3471 1f6899a5d0f39686c0fa55920969f4e4 325 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.2E-105 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 TMO_3471 1f6899a5d0f39686c0fa55920969f4e4 325 Pfam PF01138 3' exoribonuclease family, domain 1 11 138 7.0E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_3471 1f6899a5d0f39686c0fa55920969f4e4 325 SUPERFAMILY SSF54211 1 181 6.58E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_3471 1f6899a5d0f39686c0fa55920969f4e4 325 SUPERFAMILY SSF55666 151 236 2.62E-22 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TMO_c0590 8c0030c8cf146cfb55c6cb0d832febdd 390 Gene3D G3DSA:2.40.420.20 287 354 9.4E-78 T 14-10-2018 TMO_c0590 8c0030c8cf146cfb55c6cb0d832febdd 390 Gene3D G3DSA:2.40.50.100 75 203 9.4E-78 T 14-10-2018 TMO_c0590 8c0030c8cf146cfb55c6cb0d832febdd 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 355 3.0E-85 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_c0590 8c0030c8cf146cfb55c6cb0d832febdd 390 Gene3D G3DSA:1.10.287.470 110 169 9.4E-78 T 14-10-2018 TMO_c0590 8c0030c8cf146cfb55c6cb0d832febdd 390 SUPERFAMILY SSF111369 65 279 8.37E-44 T 14-10-2018 TMO_c0590 8c0030c8cf146cfb55c6cb0d832febdd 390 Gene3D G3DSA:2.40.30.170 63 286 9.4E-78 T 14-10-2018 TMO_c0590 8c0030c8cf146cfb55c6cb0d832febdd 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 276 4.5E-33 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_3300 8c4953cc3a182b61c2e74589f23f9f55 575 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 285 7.2E-74 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 TMO_3300 8c4953cc3a182b61c2e74589f23f9f55 575 Gene3D G3DSA:1.20.1530.20 5 383 2.5E-80 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily TMO_3300 8c4953cc3a182b61c2e74589f23f9f55 575 SUPERFAMILY SSF51735 403 537 2.41E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3300 8c4953cc3a182b61c2e74589f23f9f55 575 Gene3D G3DSA:3.40.50.720 403 563 1.5E-36 T 14-10-2018 TMO_3300 8c4953cc3a182b61c2e74589f23f9f55 575 Pfam PF02254 TrkA-N domain 407 520 7.7E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TMO_3300 8c4953cc3a182b61c2e74589f23f9f55 575 Pfam PF00999 Sodium/hydrogen exchanger family 12 374 9.9E-59 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TMO_c0660 6bf833a2a95f22f536d4d3f20a1cae54 347 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 317 4.5E-50 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_c0660 6bf833a2a95f22f536d4d3f20a1cae54 347 SUPERFAMILY SSF53850 138 260 2.33E-5 T 14-10-2018 TMO_c0660 6bf833a2a95f22f536d4d3f20a1cae54 347 Gene3D G3DSA:3.40.190.170 30 346 1.8E-94 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_a0557 1824bae8ea0118dae629154c9ceddce4 213 SUPERFAMILY SSF47616 81 212 1.15E-30 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_a0557 1824bae8ea0118dae629154c9ceddce4 213 Pfam PF13410 Glutathione S-transferase, C-terminal domain 136 176 1.2E-6 T 14-10-2018 TMO_a0557 1824bae8ea0118dae629154c9ceddce4 213 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 80 1.6E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_a0557 1824bae8ea0118dae629154c9ceddce4 213 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 3 212 1.2E-85 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 TMO_a0557 1824bae8ea0118dae629154c9ceddce4 213 SUPERFAMILY SSF52833 1 87 8.7E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_a0557 1824bae8ea0118dae629154c9ceddce4 213 Gene3D G3DSA:3.40.30.10 1 88 7.9E-25 T 14-10-2018 TMO_a0557 1824bae8ea0118dae629154c9ceddce4 213 Gene3D G3DSA:1.20.1050.10 89 213 2.9E-50 T 14-10-2018 TMO_1473 b7c68a4d7637acbac62012329529c1d5 177 SUPERFAMILY SSF46626 62 154 5.59E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_1473 b7c68a4d7637acbac62012329529c1d5 177 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 71 150 1.6E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1473 b7c68a4d7637acbac62012329529c1d5 177 Gene3D G3DSA:1.10.760.10 41 173 1.5E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_0037 4b9957df320c80f77f2b663cc7d59dda 226 SMART SM00100 13 131 1.4E-4 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_0037 4b9957df320c80f77f2b663cc7d59dda 226 Gene3D G3DSA:1.10.10.10 150 224 4.9E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0037 4b9957df320c80f77f2b663cc7d59dda 226 SMART SM00419 167 215 8.0E-8 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_0037 4b9957df320c80f77f2b663cc7d59dda 226 Gene3D G3DSA:2.60.120.10 8 138 8.4E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_0037 4b9957df320c80f77f2b663cc7d59dda 226 Pfam PF13545 Crp-like helix-turn-helix domain 151 222 1.1E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_0037 4b9957df320c80f77f2b663cc7d59dda 226 SUPERFAMILY SSF51206 12 138 5.63E-25 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like TMO_0037 4b9957df320c80f77f2b663cc7d59dda 226 SUPERFAMILY SSF46785 149 223 7.74E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0037 4b9957df320c80f77f2b663cc7d59dda 226 Pfam PF00027 Cyclic nucleotide-binding domain 33 118 4.9E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_3497 507ca6e30e7b5d34b59d573cf2203e85 255 Pfam PF06057 Bacterial virulence protein (VirJ) 55 241 1.9E-54 T 14-10-2018 IPR010333 Bacterial virulence TMO_3497 507ca6e30e7b5d34b59d573cf2203e85 255 Gene3D G3DSA:3.40.50.1820 30 240 4.2E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3497 507ca6e30e7b5d34b59d573cf2203e85 255 SUPERFAMILY SSF53474 48 241 2.12E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3497 507ca6e30e7b5d34b59d573cf2203e85 255 PIRSF PIRSF029063 24 248 1.1E-59 T 14-10-2018 IPR011225 Type IV secretory pathway, VirJ component TMO_c0452 25f619e823efc96b6b3b0861a483a55e 304 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 31 78 6.5E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_c0452 25f619e823efc96b6b3b0861a483a55e 304 Gene3D G3DSA:1.10.3720.10 94 298 4.7E-21 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0452 25f619e823efc96b6b3b0861a483a55e 304 SUPERFAMILY SSF161098 98 288 1.01E-25 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0452 25f619e823efc96b6b3b0861a483a55e 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 303 3.2E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0501 c826ac0396964001c83f8836eb95c7b7 303 Pfam PF03466 LysR substrate binding domain 97 300 2.4E-21 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0501 c826ac0396964001c83f8836eb95c7b7 303 SUPERFAMILY SSF46785 12 92 9.09E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0501 c826ac0396964001c83f8836eb95c7b7 303 SUPERFAMILY SSF53850 97 302 6.41E-25 T 14-10-2018 TMO_c0501 c826ac0396964001c83f8836eb95c7b7 303 Gene3D G3DSA:1.10.10.10 11 97 3.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0501 c826ac0396964001c83f8836eb95c7b7 303 Gene3D G3DSA:3.40.190.290 101 302 1.8E-16 T 14-10-2018 TMO_c0501 c826ac0396964001c83f8836eb95c7b7 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 1.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0573 d3d98534695abf31bffa4ed1b8d3a953 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 424 1.5E-82 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_a0573 d3d98534695abf31bffa4ed1b8d3a953 434 PIRSF PIRSF006066 5 434 9.3E-82 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_a0573 d3d98534695abf31bffa4ed1b8d3a953 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 430 1.0E-87 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0150 03159374c81b515f116376b842585d31 201 SUPERFAMILY SSF47616 71 200 6.25E-19 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_0150 03159374c81b515f116376b842585d31 201 SUPERFAMILY SSF52833 1 87 1.17E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_0150 03159374c81b515f116376b842585d31 201 Gene3D G3DSA:3.40.30.10 3 196 7.8E-61 T 14-10-2018 TMO_0150 03159374c81b515f116376b842585d31 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 3.2E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_0150 03159374c81b515f116376b842585d31 201 Gene3D G3DSA:1.20.1050.10 81 192 7.8E-61 T 14-10-2018 TMO_0150 03159374c81b515f116376b842585d31 201 Pfam PF13410 Glutathione S-transferase, C-terminal domain 127 188 6.9E-8 T 14-10-2018 TMO_a0146 ddf1ba8f48386cc309f196966bae813c 181 SUPERFAMILY SSF51182 1 179 1.13E-38 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_a0146 ddf1ba8f48386cc309f196966bae813c 181 Pfam PF03079 ARD/ARD' family 23 165 1.7E-28 T 14-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 TMO_a0146 ddf1ba8f48386cc309f196966bae813c 181 Gene3D G3DSA:2.60.120.10 2 157 1.0E-49 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_a0146 ddf1ba8f48386cc309f196966bae813c 181 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 38.074 T 14-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 TMO_2769 6ed5c9068ad7f46aef5ab7996cad2ac4 393 Gene3D G3DSA:3.30.2110.10 32 211 5.0E-46 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TMO_2769 6ed5c9068ad7f46aef5ab7996cad2ac4 393 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 30 388 27.37 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TMO_2769 6ed5c9068ad7f46aef5ab7996cad2ac4 393 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 37 347 7.9E-50 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TMO_2769 6ed5c9068ad7f46aef5ab7996cad2ac4 393 PIRSF PIRSF026782 26 391 2.1E-116 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TMO_2769 6ed5c9068ad7f46aef5ab7996cad2ac4 393 SUPERFAMILY SSF111342 28 314 7.98E-78 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TMO_2769 6ed5c9068ad7f46aef5ab7996cad2ac4 393 Pfam PF01888 CbiD 30 297 1.1E-83 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TMO_a0122 5c29abb0d621fd5c31b3f6c7c8322c98 265 SMART SM00382 36 224 1.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0122 5c29abb0d621fd5c31b3f6c7c8322c98 265 Pfam PF00005 ABC transporter 28 176 3.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0122 5c29abb0d621fd5c31b3f6c7c8322c98 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0122 5c29abb0d621fd5c31b3f6c7c8322c98 265 Gene3D G3DSA:3.40.50.300 6 261 3.5E-63 T 14-10-2018 TMO_a0122 5c29abb0d621fd5c31b3f6c7c8322c98 265 SUPERFAMILY SSF52540 14 237 4.13E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3357 c94cf12df1149a28e380bb645287288f 307 Gene3D G3DSA:3.40.190.290 100 288 1.2E-22 T 14-10-2018 TMO_3357 c94cf12df1149a28e380bb645287288f 307 Pfam PF03466 LysR substrate binding domain 94 289 1.3E-23 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_3357 c94cf12df1149a28e380bb645287288f 307 SUPERFAMILY SSF53850 94 291 1.0E-27 T 14-10-2018 TMO_3357 c94cf12df1149a28e380bb645287288f 307 SUPERFAMILY SSF46785 8 118 5.1E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3357 c94cf12df1149a28e380bb645287288f 307 Gene3D G3DSA:1.10.10.10 2 99 2.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3357 c94cf12df1149a28e380bb645287288f 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.1E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0145 bbf4265feed9f60157cec3e86985af20 329 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 34 288 6.1E-80 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 TMO_0145 bbf4265feed9f60157cec3e86985af20 329 Gene3D G3DSA:3.40.190.170 27 327 1.9E-114 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_0145 bbf4265feed9f60157cec3e86985af20 329 PIRSF PIRSF006470 2 329 2.4E-103 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 TMO_0145 bbf4265feed9f60157cec3e86985af20 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 314 6.0E-90 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_a0006 ad7538b67ba077283ecff5085fb4aacc 623 SUPERFAMILY SSF48452 42 109 9.07E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_a0006 ad7538b67ba077283ecff5085fb4aacc 623 Pfam PF13649 Methyltransferase domain 379 477 1.0E-13 T 14-10-2018 TMO_a0006 ad7538b67ba077283ecff5085fb4aacc 623 SUPERFAMILY SSF53335 373 580 9.21E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_a0006 ad7538b67ba077283ecff5085fb4aacc 623 Gene3D G3DSA:1.25.40.10 43 118 4.8E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_a0006 ad7538b67ba077283ecff5085fb4aacc 623 Gene3D G3DSA:3.40.50.150 351 607 1.1E-26 T 14-10-2018 TMO_1979 986b087f98f79fb63cfc30657212464e 517 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 16 222 1.4E-17 T 14-10-2018 TMO_1979 986b087f98f79fb63cfc30657212464e 517 Gene3D G3DSA:3.50.50.60 312 492 9.2E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1979 986b087f98f79fb63cfc30657212464e 517 SUPERFAMILY SSF51905 279 480 6.47E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1979 986b087f98f79fb63cfc30657212464e 517 Gene3D G3DSA:3.50.50.60 1 157 7.4E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1979 986b087f98f79fb63cfc30657212464e 517 Gene3D G3DSA:3.50.50.60 158 241 2.5E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1979 986b087f98f79fb63cfc30657212464e 517 SUPERFAMILY SSF51905 11 233 1.0E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0535 0dc668a22fcb580a383ed65eda2a6241 340 SUPERFAMILY SSF53659 6 325 1.33E-95 T 14-10-2018 TMO_c0535 0dc668a22fcb580a383ed65eda2a6241 340 Gene3D G3DSA:3.40.718.10 1 326 2.3E-114 T 14-10-2018 TMO_c0535 0dc668a22fcb580a383ed65eda2a6241 340 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 324 1.8E-103 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 TMO_c0535 0dc668a22fcb580a383ed65eda2a6241 340 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 321 1.6E-90 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 TMO_2508 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 18 37 2.2E-10 T 14-10-2018 TMO_2508 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 2.2E-10 T 14-10-2018 TMO_2508 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 2.2E-10 T 14-10-2018 TMO_2508 919182727d5ae2dbc06ec43ea4e78927 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 317 1.4E-21 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_2508 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 299 317 4.7E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_2508 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 17 39 4.7E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_2508 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 156 180 4.7E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_2508 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 116 124 4.7E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_2508 919182727d5ae2dbc06ec43ea4e78927 474 SUPERFAMILY SSF51905 10 316 3.35E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1409 f3d8f075377f8d9121ac9b8706937ed5 264 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_1409 f3d8f075377f8d9121ac9b8706937ed5 264 Gene3D G3DSA:1.10.12.10 208 261 3.3E-12 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_1409 f3d8f075377f8d9121ac9b8706937ed5 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 263 4.2E-51 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_1409 f3d8f075377f8d9121ac9b8706937ed5 264 Gene3D G3DSA:3.90.226.10 2 206 1.7E-63 T 14-10-2018 TMO_1409 f3d8f075377f8d9121ac9b8706937ed5 264 SUPERFAMILY SSF52096 4 264 1.07E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_2993 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Pfam PF00394 Multicopper oxidase 213 302 3.3E-10 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 TMO_2993 5cc75d1d5b09947ba4ab9566c6c1b87c 481 ProSitePatterns PS00079 Multicopper oxidases signature 1. 458 478 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site TMO_2993 5cc75d1d5b09947ba4ab9566c6c1b87c 481 SUPERFAMILY SSF49503 354 479 1.12E-38 T 14-10-2018 IPR008972 Cupredoxin TMO_2993 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Pfam PF07732 Multicopper oxidase 65 153 2.9E-14 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 TMO_2993 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Gene3D G3DSA:2.60.40.420 159 349 1.6E-20 T 14-10-2018 IPR008972 Cupredoxin TMO_2993 5cc75d1d5b09947ba4ab9566c6c1b87c 481 SUPERFAMILY SSF49503 32 155 2.89E-18 T 14-10-2018 IPR008972 Cupredoxin TMO_2993 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Pfam PF07731 Multicopper oxidase 370 479 7.2E-31 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 TMO_2993 5cc75d1d5b09947ba4ab9566c6c1b87c 481 ProSitePatterns PS00080 Multicopper oxidases signature 2. 463 474 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 TMO_2993 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Gene3D G3DSA:2.60.40.420 29 150 7.5E-18 T 14-10-2018 IPR008972 Cupredoxin TMO_2993 5cc75d1d5b09947ba4ab9566c6c1b87c 481 SUPERFAMILY SSF49503 160 307 1.83E-16 T 14-10-2018 IPR008972 Cupredoxin TMO_2993 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Gene3D G3DSA:2.60.40.420 350 481 3.2E-38 T 14-10-2018 IPR008972 Cupredoxin TMO_b0246 86a3a6e7f24938b1f7acb65b07aee245 88 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 4 61 1.2E-19 T 14-10-2018 IPR022789 Antitoxin ParD TMO_b0246 86a3a6e7f24938b1f7acb65b07aee245 88 SUPERFAMILY SSF47598 4 44 5.89E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_b0246 86a3a6e7f24938b1f7acb65b07aee245 88 Gene3D G3DSA:1.10.8.1250 8 86 6.9E-23 T 14-10-2018 IPR038296 Antitoxin ParD superfamily TMO_b0246 86a3a6e7f24938b1f7acb65b07aee245 88 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 5 71 3.0E-26 T 14-10-2018 IPR022789 Antitoxin ParD TMO_a0121 38e1c661ee9ebd2c8c0aea83293dbf4b 284 Gene3D G3DSA:3.40.50.1980 18 108 4.9E-18 T 14-10-2018 TMO_a0121 38e1c661ee9ebd2c8c0aea83293dbf4b 284 SUPERFAMILY SSF53807 19 279 3.65E-45 T 14-10-2018 TMO_a0121 38e1c661ee9ebd2c8c0aea83293dbf4b 284 Pfam PF01497 Periplasmic binding protein 25 259 1.3E-19 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain TMO_a0121 38e1c661ee9ebd2c8c0aea83293dbf4b 284 Gene3D G3DSA:3.40.50.1980 111 282 8.7E-48 T 14-10-2018 TMO_a0121 38e1c661ee9ebd2c8c0aea83293dbf4b 284 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 172 187 2.2E-8 T 14-10-2018 TMO_a0121 38e1c661ee9ebd2c8c0aea83293dbf4b 284 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 196 214 2.2E-8 T 14-10-2018 TMO_a0121 38e1c661ee9ebd2c8c0aea83293dbf4b 284 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 72 87 2.2E-8 T 14-10-2018 TMO_a0121 38e1c661ee9ebd2c8c0aea83293dbf4b 284 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 41 59 2.2E-8 T 14-10-2018 TMO_0811 1e16983c68b60dbe9edf1eda5e42f7bf 588 Pfam PF00474 Sodium:solute symporter family 67 327 1.7E-39 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 TMO_0811 1e16983c68b60dbe9edf1eda5e42f7bf 588 Pfam PF00474 Sodium:solute symporter family 391 509 1.4E-18 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 TMO_0811 1e16983c68b60dbe9edf1eda5e42f7bf 588 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 42 572 1.0E-226 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily TMO_0811 1e16983c68b60dbe9edf1eda5e42f7bf 588 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 67 509 8.4E-59 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 TMO_0811 1e16983c68b60dbe9edf1eda5e42f7bf 588 Gene3D G3DSA:1.20.1730.10 55 575 2.9E-68 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily TMO_d0012 a43c6727f3471c112eca8e8ca3ff8092 169 Gene3D G3DSA:2.60.40.1890 41 153 2.6E-38 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily TMO_d0012 a43c6727f3471c112eca8e8ca3ff8092 169 Pfam PF04314 Copper chaperone PCu(A)C 37 144 7.3E-40 T 14-10-2018 IPR007410 Copper chaperone PCuAC TMO_d0012 a43c6727f3471c112eca8e8ca3ff8092 169 SUPERFAMILY SSF110087 13 152 2.48E-48 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily TMO_0115 aff2719802cca2c2f1a044966b69c227 658 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 7 489 7.5E-195 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TMO_0115 aff2719802cca2c2f1a044966b69c227 658 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 45 490 5.7E-165 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TMO_0115 aff2719802cca2c2f1a044966b69c227 658 ProSitePatterns PS01303 BCCT family of transporters signature. 307 316 - T 14-10-2018 IPR018093 BCCT transporter, conserved site TMO_0011 c69c58bffa1dceafa858edb1b3d32e4b 295 SUPERFAMILY SSF53335 8 283 6.41E-63 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0011 c69c58bffa1dceafa858edb1b3d32e4b 295 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 289 4.8E-57 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 TMO_0011 c69c58bffa1dceafa858edb1b3d32e4b 295 Gene3D G3DSA:3.40.50.150 1 294 3.2E-80 T 14-10-2018 TMO_0011 c69c58bffa1dceafa858edb1b3d32e4b 295 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 279 36.521 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 2.1E-62 T 14-10-2018 TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 SUPERFAMILY SSF51735 6 245 2.28E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 Gene3D G3DSA:3.40.50.720 1 244 2.1E-79 T 14-10-2018 TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 6.1E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.1E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0578 3763fe07d301d19ef1a15a15688969dd 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.1E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0299 a40e4b38d3d39168a66d1aed47402555 413 SUPERFAMILY SSF103473 12 410 1.31E-57 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_b0299 a40e4b38d3d39168a66d1aed47402555 413 Pfam PF07690 Major Facilitator Superfamily 36 230 6.4E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_b0299 a40e4b38d3d39168a66d1aed47402555 413 Gene3D G3DSA:1.20.1250.20 23 402 1.7E-50 T 14-10-2018 TMO_b0299 a40e4b38d3d39168a66d1aed47402555 413 PRINTS PR01035 Tetracycline resistance protein signature 98 122 7.2E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_b0299 a40e4b38d3d39168a66d1aed47402555 413 PRINTS PR01035 Tetracycline resistance protein signature 156 178 7.2E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_b0299 a40e4b38d3d39168a66d1aed47402555 413 PRINTS PR01035 Tetracycline resistance protein signature 265 285 7.2E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_b0299 a40e4b38d3d39168a66d1aed47402555 413 PRINTS PR01035 Tetracycline resistance protein signature 67 86 7.2E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_0765 f8068e36275bdc73bf6a613c8fff74fa 383 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 23 370 7.7E-126 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_0765 f8068e36275bdc73bf6a613c8fff74fa 383 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 373 26.026 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_0765 f8068e36275bdc73bf6a613c8fff74fa 383 Pfam PF01098 Cell cycle protein 27 370 1.5E-95 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_1512 d6921c2e3345ce7c528cce1d5925a6e8 225 SUPERFAMILY SSF46785 10 80 1.63E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1512 d6921c2e3345ce7c528cce1d5925a6e8 225 Pfam PF04079 Segregation and condensation complex subunit ScpB 15 168 9.4E-46 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TMO_1512 d6921c2e3345ce7c528cce1d5925a6e8 225 Gene3D G3DSA:1.10.10.10 5 84 1.1E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1512 d6921c2e3345ce7c528cce1d5925a6e8 225 PIRSF PIRSF019345 3 195 7.5E-46 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TMO_1512 d6921c2e3345ce7c528cce1d5925a6e8 225 Gene3D G3DSA:1.10.10.10 85 177 7.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1512 d6921c2e3345ce7c528cce1d5925a6e8 225 SUPERFAMILY SSF46785 86 160 2.5E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1512 d6921c2e3345ce7c528cce1d5925a6e8 225 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 14 172 5.0E-31 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TMO_c0671 3a228b837c08785283cbb2ab98bfe195 618 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 103 542 1.7E-94 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_c0671 3a228b837c08785283cbb2ab98bfe195 618 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 3 611 6.6E-182 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 Gene3D G3DSA:1.20.120.530 191 330 1.1E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 77 93 1.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 63 77 1.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 SMART SM00895 197 324 9.5E-15 T 14-10-2018 IPR011711 GntR, C-terminal TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 Pfam PF07729 FCD domain 197 323 5.8E-18 T 14-10-2018 IPR011711 GntR, C-terminal TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 SUPERFAMILY SSF46785 41 117 1.17E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 Gene3D G3DSA:1.10.10.10 125 187 1.1E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 SUPERFAMILY SSF48008 194 327 3.66E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 SUPERFAMILY SSF46785 126 186 9.56E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 SMART SM00345 45 103 1.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 SMART SM00345 129 185 2.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 Pfam PF00392 Bacterial regulatory proteins, gntR family 127 184 2.7E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 Pfam PF00392 Bacterial regulatory proteins, gntR family 44 102 9.6E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0044 7d5e98300fd7e4e61a40ab272736a30a 391 Gene3D G3DSA:1.10.10.10 25 103 4.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3329 6421ca6eb9d6e62ff974f7e8748fbc79 133 Gene3D G3DSA:3.20.170.20 16 127 2.1E-33 T 14-10-2018 TMO_3329 6421ca6eb9d6e62ff974f7e8748fbc79 133 Pfam PF06108 Protein of unknown function (DUF952) 23 108 1.8E-28 T 14-10-2018 IPR009297 Protein of unknown function DUF952 TMO_3329 6421ca6eb9d6e62ff974f7e8748fbc79 133 SUPERFAMILY SSF56399 17 124 8.92E-31 T 14-10-2018 TMO_1759 f0d399fb1bdc753f4e2abf821ca28431 346 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 12 340 38.051 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 TMO_1759 f0d399fb1bdc753f4e2abf821ca28431 346 Gene3D G3DSA:1.20.970.10 1 77 4.6E-24 T 14-10-2018 TMO_1759 f0d399fb1bdc753f4e2abf821ca28431 346 Gene3D G3DSA:3.40.1030.10 79 344 1.0E-104 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TMO_1759 f0d399fb1bdc753f4e2abf821ca28431 346 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 16 339 1.4E-120 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 TMO_1759 f0d399fb1bdc753f4e2abf821ca28431 346 Pfam PF00591 Glycosyl transferase family, a/b domain 82 330 2.5E-94 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TMO_1759 f0d399fb1bdc753f4e2abf821ca28431 346 SUPERFAMILY SSF52418 82 343 5.63E-94 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TMO_1759 f0d399fb1bdc753f4e2abf821ca28431 346 Pfam PF02885 Glycosyl transferase family, helical bundle domain 13 73 1.2E-20 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 TMO_1759 f0d399fb1bdc753f4e2abf821ca28431 346 SUPERFAMILY SSF47648 11 76 5.76E-20 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TMO_1751 61cd6a63a418821a4ced1ce1a63715d9 637 Pfam PF13624 SurA N-terminal domain 1 163 3.4E-42 T 14-10-2018 TMO_1751 61cd6a63a418821a4ced1ce1a63715d9 637 Gene3D G3DSA:3.10.50.40 262 349 9.4E-14 T 14-10-2018 TMO_1751 61cd6a63a418821a4ced1ce1a63715d9 637 SUPERFAMILY SSF109998 39 295 1.1E-21 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily TMO_1751 61cd6a63a418821a4ced1ce1a63715d9 637 SUPERFAMILY SSF54534 219 348 6.59E-16 T 14-10-2018 TMO_1751 61cd6a63a418821a4ced1ce1a63715d9 637 Pfam PF13145 PPIC-type PPIASE domain 246 364 1.7E-23 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TMO_3160 ae9db53d028a5e29f9cd1ca4d3743c84 227 Pfam PF01144 Coenzyme A transferase 3 207 9.1E-76 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 TMO_3160 ae9db53d028a5e29f9cd1ca4d3743c84 227 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 8 208 1.2E-76 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 TMO_3160 ae9db53d028a5e29f9cd1ca4d3743c84 227 Gene3D G3DSA:3.40.1080.10 1 219 9.4E-92 T 14-10-2018 TMO_3160 ae9db53d028a5e29f9cd1ca4d3743c84 227 SUPERFAMILY SSF100950 4 220 2.51E-85 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_3160 ae9db53d028a5e29f9cd1ca4d3743c84 227 SMART SM00882 1 209 5.9E-85 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 TMO_0787 80e047742c93ef8d5d2771f3318ce03a 488 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 4 474 43.166 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 TMO_0787 80e047742c93ef8d5d2771f3318ce03a 488 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 5 457 1.2E-106 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 TMO_3403 bc04d0b64b788c55802ffdd2464ef365 212 Pfam PF02545 Maf-like protein 17 205 3.5E-39 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 TMO_3403 bc04d0b64b788c55802ffdd2464ef365 212 PIRSF PIRSF006305 10 210 3.2E-39 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 TMO_3403 bc04d0b64b788c55802ffdd2464ef365 212 Gene3D G3DSA:3.90.950.10 16 211 9.9E-49 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_3403 bc04d0b64b788c55802ffdd2464ef365 212 SUPERFAMILY SSF52972 16 205 1.7E-48 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_3403 bc04d0b64b788c55802ffdd2464ef365 212 Hamap MF_00528 Septum formation protein Maf [maf]. 17 211 25.486 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 TMO_2594 146073b6117545f41faea40192c176e3 182 PIRSF PIRSF016661 1 178 2.1E-43 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 TMO_2594 146073b6117545f41faea40192c176e3 182 Gene3D G3DSA:1.10.1760.20 1 177 8.7E-51 T 14-10-2018 TMO_2594 146073b6117545f41faea40192c176e3 182 Pfam PF02632 BioY family 30 170 6.6E-35 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 TMO_c0142 9baf189fe636e832d441140dc1167348 453 SMART SM00304 185 238 5.6E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_c0142 9baf189fe636e832d441140dc1167348 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 4.8E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0142 9baf189fe636e832d441140dc1167348 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 4.8E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_c0142 9baf189fe636e832d441140dc1167348 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 296 1.2E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0142 9baf189fe636e832d441140dc1167348 453 SMART SM00387 337 453 1.2E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0142 9baf189fe636e832d441140dc1167348 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 452 1.0E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_c0142 9baf189fe636e832d441140dc1167348 453 Gene3D G3DSA:3.30.565.10 300 452 2.1E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0142 9baf189fe636e832d441140dc1167348 453 Gene3D G3DSA:1.10.287.130 189 297 1.2E-19 T 14-10-2018 TMO_c0142 9baf189fe636e832d441140dc1167348 453 SMART SM00388 239 297 3.7E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_c0142 9baf189fe636e832d441140dc1167348 453 SUPERFAMILY SSF47384 222 295 1.39E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_c0142 9baf189fe636e832d441140dc1167348 453 SUPERFAMILY SSF55874 297 453 4.98E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_c0142 9baf189fe636e832d441140dc1167348 453 Pfam PF00672 HAMP domain 185 235 6.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_3099 5497e78df510f4782a3f2842aaaf47b8 116 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 21 96 4.4E-22 T 14-10-2018 IPR003746 Protein of unknown function DUF167 TMO_3099 5497e78df510f4782a3f2842aaaf47b8 116 SMART SM01152 17 98 1.6E-21 T 14-10-2018 IPR003746 Protein of unknown function DUF167 TMO_3099 5497e78df510f4782a3f2842aaaf47b8 116 Hamap MF_00634 UPF0235 protein YggU [yggU]. 17 113 17.054 T 14-10-2018 IPR003746 Protein of unknown function DUF167 TMO_3099 5497e78df510f4782a3f2842aaaf47b8 116 Gene3D G3DSA:3.30.1200.10 8 111 6.2E-21 T 14-10-2018 IPR036591 YggU-like superfamily TMO_3099 5497e78df510f4782a3f2842aaaf47b8 116 SUPERFAMILY SSF69786 15 100 5.36E-19 T 14-10-2018 IPR036591 YggU-like superfamily TMO_1148 7a2049ad7e7e03aa34e9069a017e71c9 353 Pfam PF13407 Periplasmic binding protein domain 60 315 4.0E-31 T 14-10-2018 IPR025997 Periplasmic binding protein TMO_1148 7a2049ad7e7e03aa34e9069a017e71c9 353 SUPERFAMILY SSF53822 54 334 4.53E-44 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_1148 7a2049ad7e7e03aa34e9069a017e71c9 353 Gene3D G3DSA:3.40.50.2300 58 325 2.4E-120 T 14-10-2018 TMO_1148 7a2049ad7e7e03aa34e9069a017e71c9 353 Gene3D G3DSA:3.40.50.2300 162 335 2.4E-120 T 14-10-2018 TMO_0015 4e97c9d9d699f8ea588355ab6b84d5d8 226 Pfam PF14518 Iron-containing redox enzyme 38 195 3.9E-23 T 14-10-2018 TMO_0015 4e97c9d9d699f8ea588355ab6b84d5d8 226 SMART SM01236 71 175 1.1E-10 T 14-10-2018 TMO_0015 4e97c9d9d699f8ea588355ab6b84d5d8 226 Gene3D G3DSA:1.20.910.10 1 225 3.0E-48 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_0015 4e97c9d9d699f8ea588355ab6b84d5d8 226 SUPERFAMILY SSF48613 3 218 4.45E-34 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_1072 0040826545cb7d6b9d19d72ed79a4cc1 155 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 7 108 1.5E-12 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_1072 0040826545cb7d6b9d19d72ed79a4cc1 155 SUPERFAMILY SSF50475 1 119 1.12E-11 T 14-10-2018 TMO_1072 0040826545cb7d6b9d19d72ed79a4cc1 155 Gene3D G3DSA:2.30.110.10 2 132 9.2E-16 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_3118 cb23a330ba0c3460f2cdcfe92ae51f64 383 SUPERFAMILY SSF55073 150 337 1.88E-35 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_3118 cb23a330ba0c3460f2cdcfe92ae51f64 383 Gene3D G3DSA:3.30.70.1230 152 340 8.6E-29 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_3118 cb23a330ba0c3460f2cdcfe92ae51f64 383 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 156 335 1.5E-14 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_b0287 207201ca6fc3d9db2bcefd3b108c8e8b 322 Pfam PF00248 Aldo/keto reductase family 4 300 2.4E-67 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_b0287 207201ca6fc3d9db2bcefd3b108c8e8b 322 SUPERFAMILY SSF51430 1 303 1.57E-88 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_b0287 207201ca6fc3d9db2bcefd3b108c8e8b 322 Gene3D G3DSA:3.20.20.100 1 320 2.6E-101 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_b0430 543b8044f0000ddbe7340c01e7d58ea2 234 Gene3D G3DSA:3.40.225.10 2 219 1.1E-36 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_b0430 543b8044f0000ddbe7340c01e7d58ea2 234 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 178 4.6E-22 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_b0430 543b8044f0000ddbe7340c01e7d58ea2 234 SMART SM01007 7 179 7.4E-20 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_b0430 543b8044f0000ddbe7340c01e7d58ea2 234 SUPERFAMILY SSF53639 5 186 1.43E-30 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_c0347 66f054abefff88b6eb38849eecf97017 340 SUPERFAMILY SSF161098 95 323 1.42E-14 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0347 66f054abefff88b6eb38849eecf97017 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 337 1.8E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0330 8f9285c933dfb2bf91e84f9c8485921d 515 Gene3D G3DSA:2.30.120.10 35 110 3.7E-150 T 14-10-2018 TMO_b0330 8f9285c933dfb2bf91e84f9c8485921d 515 Gene3D G3DSA:3.60.20.10 2 500 3.7E-150 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_b0330 8f9285c933dfb2bf91e84f9c8485921d 515 Pfam PF01804 Penicillin amidase 2 501 3.0E-68 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 TMO_b0330 8f9285c933dfb2bf91e84f9c8485921d 515 Gene3D G3DSA:1.10.1400.10 248 434 3.7E-150 T 14-10-2018 TMO_b0330 8f9285c933dfb2bf91e84f9c8485921d 515 SUPERFAMILY SSF56235 3 506 7.2E-80 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_c0711 95fe370eecfe6629b403fd4bf6f3ef68 80 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 12 58 2.8E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TMO_c0711 95fe370eecfe6629b403fd4bf6f3ef68 80 Gene3D G3DSA:2.10.260.10 6 80 4.2E-12 T 14-10-2018 TMO_c0711 95fe370eecfe6629b403fd4bf6f3ef68 80 SUPERFAMILY SSF89447 8 70 3.5E-11 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily TMO_c0711 95fe370eecfe6629b403fd4bf6f3ef68 80 SMART SM00966 12 52 6.6E-4 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TMO_c0776 46ff70d6cf06d657fdd86e66d43ba737 166 Pfam PF06073 Bacterial protein of unknown function (DUF934) 54 140 2.1E-28 T 14-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 TMO_c0776 46ff70d6cf06d657fdd86e66d43ba737 166 PIRSF PIRSF030820 1 159 5.7E-33 T 14-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 TMO_3044 f4b6821ef1430c561493a01a7fbf8425 267 SUPERFAMILY SSF52096 10 262 6.93E-60 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_3044 f4b6821ef1430c561493a01a7fbf8425 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 249 6.4E-42 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_3044 f4b6821ef1430c561493a01a7fbf8425 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 115 135 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_3044 f4b6821ef1430c561493a01a7fbf8425 267 Gene3D G3DSA:3.90.226.10 9 266 6.2E-60 T 14-10-2018 TMO_0210 32aad0a032eeaf9ecb7bc6f164cb5227 183 Pfam PF07484 Phage Tail Collar Domain 6 61 2.1E-23 T 14-10-2018 IPR011083 Phage tail collar domain TMO_0210 32aad0a032eeaf9ecb7bc6f164cb5227 183 Gene3D G3DSA:3.90.1340.10 3 58 9.5E-16 T 14-10-2018 IPR037053 Phage tail collar domain superfamily TMO_0210 32aad0a032eeaf9ecb7bc6f164cb5227 183 SUPERFAMILY SSF88874 2 177 1.31E-42 T 14-10-2018 TMO_1152 3bef784b1c06a9bc52bd39a788d9d514 78 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 38 51 7.4E-10 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TMO_1152 3bef784b1c06a9bc52bd39a788d9d514 78 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 6 19 7.4E-10 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TMO_1152 3bef784b1c06a9bc52bd39a788d9d514 78 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 23 37 7.4E-10 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TMO_1152 3bef784b1c06a9bc52bd39a788d9d514 78 Pfam PF00364 Biotin-requiring enzyme 3 76 1.8E-14 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_1152 3bef784b1c06a9bc52bd39a788d9d514 78 SUPERFAMILY SSF51230 3 77 2.93E-18 T 14-10-2018 IPR011053 Single hybrid motif TMO_1152 3bef784b1c06a9bc52bd39a788d9d514 78 Gene3D G3DSA:2.40.50.100 1 77 3.8E-22 T 14-10-2018 TMO_a0578 c200db85f9a0d20273c08adceb71a0a5 167 SUPERFAMILY SSF88659 98 166 1.05E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_a0578 c200db85f9a0d20273c08adceb71a0a5 167 Gene3D G3DSA:1.10.1740.10 1 80 1.4E-9 T 14-10-2018 TMO_a0578 c200db85f9a0d20273c08adceb71a0a5 167 SUPERFAMILY SSF88946 8 92 5.49E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_a0578 c200db85f9a0d20273c08adceb71a0a5 167 Pfam PF04542 Sigma-70 region 2 11 78 1.6E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_a0578 c200db85f9a0d20273c08adceb71a0a5 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 165 3.4E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_a0578 c200db85f9a0d20273c08adceb71a0a5 167 Pfam PF08281 Sigma-70, region 4 110 162 2.4E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_a0578 c200db85f9a0d20273c08adceb71a0a5 167 Gene3D G3DSA:1.10.10.10 85 167 1.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0280 b90081d75454cbb8781d90158d672437 127 Pfam PF07883 Cupin domain 54 108 2.0E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_a0280 b90081d75454cbb8781d90158d672437 127 SUPERFAMILY SSF51182 11 122 3.47E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_a0280 b90081d75454cbb8781d90158d672437 127 Gene3D G3DSA:2.60.120.10 23 127 5.6E-17 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_3197 c4f5ec93287d011dbe257f06ad42b85c 229 Gene3D G3DSA:3.40.50.300 1 228 2.8E-70 T 14-10-2018 TMO_3197 c4f5ec93287d011dbe257f06ad42b85c 229 SUPERFAMILY SSF52540 1 220 1.65E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3197 c4f5ec93287d011dbe257f06ad42b85c 229 Pfam PF00005 ABC transporter 21 167 1.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3197 c4f5ec93287d011dbe257f06ad42b85c 229 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3197 c4f5ec93287d011dbe257f06ad42b85c 229 SMART SM00382 30 216 2.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 257 6.3E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 6.3E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.3E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 6.3E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.3E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 6.3E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 Gene3D G3DSA:3.40.50.720 2 274 3.8E-75 T 14-10-2018 TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 186 7.2E-4 T 14-10-2018 TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 272 4.6E-51 T 14-10-2018 TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 SUPERFAMILY SSF51735 5 274 9.02E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0978 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3166 6931df911bf1df32e4a28249e3ab7896 141 Pfam PF03061 Thioesterase superfamily 24 103 1.2E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_3166 6931df911bf1df32e4a28249e3ab7896 141 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 122 2.8E-22 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TMO_3166 6931df911bf1df32e4a28249e3ab7896 141 SUPERFAMILY SSF54637 2 136 1.21E-35 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_3166 6931df911bf1df32e4a28249e3ab7896 141 PIRSF PIRSF003230 2 139 7.0E-25 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TMO_3166 6931df911bf1df32e4a28249e3ab7896 141 Gene3D G3DSA:3.10.129.10 1 138 1.1E-35 T 14-10-2018 TMO_c0552 db0e79e83abae9d32fb7f6e0112fd85f 417 Pfam PF07690 Major Facilitator Superfamily 30 249 5.4E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0552 db0e79e83abae9d32fb7f6e0112fd85f 417 SUPERFAMILY SSF103473 17 403 7.46E-46 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0552 db0e79e83abae9d32fb7f6e0112fd85f 417 Gene3D G3DSA:1.20.1250.20 19 412 2.7E-34 T 14-10-2018 TMO_0486 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 Pfam PF00501 AMP-binding enzyme 47 471 4.4E-63 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0486 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 Gene3D G3DSA:3.40.50.12780 16 465 3.4E-107 T 14-10-2018 TMO_0486 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0486 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 Gene3D G3DSA:3.30.300.30 466 577 2.2E-16 T 14-10-2018 TMO_0486 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 SUPERFAMILY SSF56801 21 577 6.8E-91 T 14-10-2018 TMO_b0452 3118128c69ed5d1ed7a84ce342f24081 512 Gene3D G3DSA:1.10.3650.10 358 434 5.3E-29 T 14-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 TMO_b0452 3118128c69ed5d1ed7a84ce342f24081 512 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 1.5E-28 T 14-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 TMO_b0452 3118128c69ed5d1ed7a84ce342f24081 512 Pfam PF13247 4Fe-4S dicluster domain 175 271 3.6E-37 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_b0452 3118128c69ed5d1ed7a84ce342f24081 512 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 488 4.3E-293 T 14-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 TMO_b0452 3118128c69ed5d1ed7a84ce342f24081 512 SUPERFAMILY SSF54862 1 502 1.05E-178 T 14-10-2018 TMO_b0452 3118128c69ed5d1ed7a84ce342f24081 512 Gene3D G3DSA:3.30.70.20 1 294 4.5E-100 T 14-10-2018 TMO_3559 6316b193c02f73b800d653798a391667 504 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 8 444 1.5E-163 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 TMO_3559 6316b193c02f73b800d653798a391667 504 Pfam PF03109 ABC1 family 116 233 1.8E-32 T 14-10-2018 IPR004147 UbiB domain TMO_3559 6316b193c02f73b800d653798a391667 504 SUPERFAMILY SSF56112 98 436 1.04E-36 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_c0538 68dcdd5a62a175de34ab4585e9d2d9a9 311 SUPERFAMILY SSF53850 100 308 1.09E-40 T 14-10-2018 TMO_c0538 68dcdd5a62a175de34ab4585e9d2d9a9 311 Pfam PF03466 LysR substrate binding domain 99 302 6.8E-39 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0538 68dcdd5a62a175de34ab4585e9d2d9a9 311 SUPERFAMILY SSF46785 17 98 1.13E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0538 68dcdd5a62a175de34ab4585e9d2d9a9 311 Gene3D G3DSA:3.40.190.290 103 305 5.0E-57 T 14-10-2018 TMO_c0538 68dcdd5a62a175de34ab4585e9d2d9a9 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 1.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0538 68dcdd5a62a175de34ab4585e9d2d9a9 311 Gene3D G3DSA:1.10.10.10 16 101 5.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2931 c6bd020356e259fd5334b2e553615d81 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 136 4.2E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_2931 c6bd020356e259fd5334b2e553615d81 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 TMO_2931 c6bd020356e259fd5334b2e553615d81 343 Pfam PF00107 Zinc-binding dehydrogenase 181 305 6.2E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_2931 c6bd020356e259fd5334b2e553615d81 343 Gene3D G3DSA:3.90.180.10 16 338 1.9E-130 T 14-10-2018 TMO_2931 c6bd020356e259fd5334b2e553615d81 343 Gene3D G3DSA:3.40.50.720 154 292 1.9E-130 T 14-10-2018 TMO_2931 c6bd020356e259fd5334b2e553615d81 343 SMART SM00829 16 341 1.1E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_2931 c6bd020356e259fd5334b2e553615d81 343 SUPERFAMILY SSF51735 144 311 6.38E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2931 c6bd020356e259fd5334b2e553615d81 343 SUPERFAMILY SSF50129 2 341 2.59E-56 T 14-10-2018 IPR011032 GroES-like superfamily TMO_2752 34256881a2e8d6ff7061e83f396c4dbc 207 SUPERFAMILY SSF52499 11 201 9.68E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_2752 34256881a2e8d6ff7061e83f396c4dbc 207 Gene3D G3DSA:3.40.50.850 7 203 3.6E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_2752 34256881a2e8d6ff7061e83f396c4dbc 207 Pfam PF00857 Isochorismatase family 29 199 1.4E-33 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_a0602 0f534439c878008e3fbca84e77085707 236 SMART SM00987 64 231 4.1E-30 T 14-10-2018 TMO_a0602 0f534439c878008e3fbca84e77085707 236 SMART SM00986 64 231 4.1E-30 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_a0602 0f534439c878008e3fbca84e77085707 236 Pfam PF03167 Uracil DNA glycosylase superfamily 71 216 3.4E-36 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_a0602 0f534439c878008e3fbca84e77085707 236 Gene3D G3DSA:3.40.470.10 8 230 4.0E-57 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_a0602 0f534439c878008e3fbca84e77085707 236 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 73 230 7.9E-69 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 TMO_a0602 0f534439c878008e3fbca84e77085707 236 SUPERFAMILY SSF52141 17 224 9.68E-47 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_3060 b53f40d612cd28538cb36d634a104f7f 141 SUPERFAMILY SSF52016 1 135 3.73E-44 T 14-10-2018 TMO_3060 b53f40d612cd28538cb36d634a104f7f 141 Gene3D G3DSA:3.20.19.10 1 138 6.4E-54 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 TMO_3060 b53f40d612cd28538cb36d634a104f7f 141 Pfam PF00694 Aconitase C-terminal domain 1 63 2.3E-27 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 TMO_3186 ecffd74a7b6a5e3cf098a3f16958a000 302 SUPERFAMILY SSF161098 143 253 7.98E-9 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3186 ecffd74a7b6a5e3cf098a3f16958a000 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 166 250 1.3E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3186 ecffd74a7b6a5e3cf098a3f16958a000 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 54 3.5E-5 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_3186 ecffd74a7b6a5e3cf098a3f16958a000 302 Gene3D G3DSA:1.10.3720.10 136 256 1.4E-6 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2498 44e4c86542b3915b1b5ed2b380ee5f3a 179 PIRSF PIRSF000239 1 179 2.4E-54 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_2498 44e4c86542b3915b1b5ed2b380ee5f3a 179 Pfam PF00578 AhpC/TSA family 4 137 7.7E-32 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_2498 44e4c86542b3915b1b5ed2b380ee5f3a 179 SUPERFAMILY SSF52833 1 178 1.01E-54 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_2498 44e4c86542b3915b1b5ed2b380ee5f3a 179 Gene3D G3DSA:3.40.30.10 1 179 1.5E-60 T 14-10-2018 TMO_0543 b692040a6192ab979db115b622099f2d 196 SUPERFAMILY SSF49482 34 193 4.06E-48 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_0543 b692040a6192ab979db115b622099f2d 196 Gene3D G3DSA:2.60.130.10 45 194 8.9E-53 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_0543 b692040a6192ab979db115b622099f2d 196 Pfam PF00775 Dioxygenase 55 169 1.9E-21 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 TMO_0843 31dc9419a9bbe240107b6820bf21a80e 219 Gene3D G3DSA:3.40.50.1950 28 217 1.6E-73 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TMO_0843 31dc9419a9bbe240107b6820bf21a80e 219 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 29 209 4.1E-69 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like TMO_0843 31dc9419a9bbe240107b6820bf21a80e 219 SUPERFAMILY SSF52507 28 211 1.83E-60 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TMO_0843 31dc9419a9bbe240107b6820bf21a80e 219 Pfam PF02441 Flavoprotein 29 190 2.5E-21 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 TMO_0843 31dc9419a9bbe240107b6820bf21a80e 219 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 28 211 35.835 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like TMO_2104 a94f785b70fec9a5e9f049372bb89fe8 191 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 44 184 2.1E-41 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TMO_2104 a94f785b70fec9a5e9f049372bb89fe8 191 PIRSF PIRSF001467 38 189 4.7E-30 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 TMO_2104 a94f785b70fec9a5e9f049372bb89fe8 191 Gene3D G3DSA:2.40.100.10 18 190 3.9E-46 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily TMO_2104 a94f785b70fec9a5e9f049372bb89fe8 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 56 71 5.1E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TMO_2104 a94f785b70fec9a5e9f049372bb89fe8 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 148 5.1E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TMO_2104 a94f785b70fec9a5e9f049372bb89fe8 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 149 164 5.1E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TMO_2104 a94f785b70fec9a5e9f049372bb89fe8 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 82 94 5.1E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TMO_2104 a94f785b70fec9a5e9f049372bb89fe8 191 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 77 94 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 TMO_2104 a94f785b70fec9a5e9f049372bb89fe8 191 SUPERFAMILY SSF50891 39 187 8.33E-47 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily TMO_c0774 bd135b054d8e622cf9d5061f296938dc 128 Pfam PF09361 Phasin protein 23 114 2.5E-13 T 14-10-2018 IPR018968 Phasin TMO_1462 42b5ed8e887a87e95fb8ef74e4c4496f 225 Gene3D G3DSA:1.10.357.10 26 223 2.1E-40 T 14-10-2018 TMO_1462 42b5ed8e887a87e95fb8ef74e4c4496f 225 SUPERFAMILY SSF48498 107 217 3.56E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1462 42b5ed8e887a87e95fb8ef74e4c4496f 225 ProSitePatterns PS01081 TetR-type HTH domain signature. 50 81 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_1462 42b5ed8e887a87e95fb8ef74e4c4496f 225 SUPERFAMILY SSF46689 24 97 2.05E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1462 42b5ed8e887a87e95fb8ef74e4c4496f 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 59 82 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1462 42b5ed8e887a87e95fb8ef74e4c4496f 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 51 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1462 42b5ed8e887a87e95fb8ef74e4c4496f 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 41 82 8.4E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0664 4377224043ab215132b24a94f4487a99 348 Gene3D G3DSA:3.40.190.170 47 348 3.0E-75 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_0664 4377224043ab215132b24a94f4487a99 348 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 49 331 6.6E-61 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_c0629 abd7467f9c0957f3ca3e23b0bb7c36ea 1035 Gene3D G3DSA:3.40.50.300 450 687 4.3E-10 T 14-10-2018 TMO_c0629 abd7467f9c0957f3ca3e23b0bb7c36ea 1035 SUPERFAMILY SSF52540 123 317 1.78E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0629 abd7467f9c0957f3ca3e23b0bb7c36ea 1035 Pfam PF04851 Type III restriction enzyme, res subunit 152 328 3.4E-11 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TMO_c0629 abd7467f9c0957f3ca3e23b0bb7c36ea 1035 SUPERFAMILY SSF52540 172 667 8.15E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0150 37080cc61e5b95c31427e877294ef880 366 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 359 35.69 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 TMO_c0150 37080cc61e5b95c31427e877294ef880 366 Gene3D G3DSA:3.40.50.10470 191 356 2.6E-46 T 14-10-2018 TMO_c0150 37080cc61e5b95c31427e877294ef880 366 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 39 348 7.1E-85 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 TMO_c0150 37080cc61e5b95c31427e877294ef880 366 Pfam PF01008 Initiation factor 2 subunit family 52 348 7.4E-56 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 TMO_c0150 37080cc61e5b95c31427e877294ef880 366 Gene3D G3DSA:1.20.120.1840 8 190 8.3E-47 T 14-10-2018 TMO_c0150 37080cc61e5b95c31427e877294ef880 366 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 349 2.8E-119 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 TMO_c0150 37080cc61e5b95c31427e877294ef880 366 SUPERFAMILY SSF100950 13 352 1.02E-105 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_2017 044fb8314c02f1b9cf15e8a549d06bde 440 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 223 344 1.5E-6 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 TMO_2017 044fb8314c02f1b9cf15e8a549d06bde 440 PIRSF PIRSF017085 1 401 1.6E-143 T 14-10-2018 IPR016683 Glycosyl transferase, family 28, RedA, predicted TMO_2017 044fb8314c02f1b9cf15e8a549d06bde 440 SUPERFAMILY SSF53756 146 362 5.1E-15 T 14-10-2018 TMO_2017 044fb8314c02f1b9cf15e8a549d06bde 440 Gene3D G3DSA:3.40.50.2000 205 372 1.2E-15 T 14-10-2018 TMO_b0280 d230ae41610383aeb56e303ea190b0a0 145 SUPERFAMILY SSF54637 14 130 2.85E-25 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_b0280 d230ae41610383aeb56e303ea190b0a0 145 Gene3D G3DSA:3.10.129.10 13 143 3.1E-29 T 14-10-2018 TMO_b0280 d230ae41610383aeb56e303ea190b0a0 145 Pfam PF03061 Thioesterase superfamily 50 111 9.5E-5 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_b0235 eb46789f25719c8d2478aff84e6a6cee 239 Pfam PF00005 ABC transporter 21 166 1.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0235 eb46789f25719c8d2478aff84e6a6cee 239 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0235 eb46789f25719c8d2478aff84e6a6cee 239 Gene3D G3DSA:3.40.50.300 1 239 7.5E-54 T 14-10-2018 TMO_b0235 eb46789f25719c8d2478aff84e6a6cee 239 SUPERFAMILY SSF52540 4 232 1.16E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0235 eb46789f25719c8d2478aff84e6a6cee 239 SMART SM00382 30 215 5.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0513 ff86a20fec04d2e8f4d76f2b00200bfc 354 SUPERFAMILY SSF53850 132 255 3.72E-5 T 14-10-2018 TMO_a0513 ff86a20fec04d2e8f4d76f2b00200bfc 354 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 325 4.3E-30 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_a0513 ff86a20fec04d2e8f4d76f2b00200bfc 354 Gene3D G3DSA:3.40.190.170 31 352 2.5E-64 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_0499 a8423b878372cead4555ec59a47f4f8f 417 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 76 94 2.4E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_0499 a8423b878372cead4555ec59a47f4f8f 417 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 2.4E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_0499 a8423b878372cead4555ec59a47f4f8f 417 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 57 73 2.4E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_0499 a8423b878372cead4555ec59a47f4f8f 417 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 263 281 2.4E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_0499 a8423b878372cead4555ec59a47f4f8f 417 SUPERFAMILY SSF53822 34 397 3.13E-95 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_0499 a8423b878372cead4555ec59a47f4f8f 417 Pfam PF13433 Periplasmic binding protein domain 35 397 7.0E-144 T 14-10-2018 TMO_0499 a8423b878372cead4555ec59a47f4f8f 417 Gene3D G3DSA:3.40.50.2300 37 365 2.3E-137 T 14-10-2018 TMO_0499 a8423b878372cead4555ec59a47f4f8f 417 Gene3D G3DSA:3.40.50.2300 150 382 2.3E-137 T 14-10-2018 TMO_1404 69da2224a6d00d62d257b69442dbf3df 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.5E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1404 69da2224a6d00d62d257b69442dbf3df 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.5E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1404 69da2224a6d00d62d257b69442dbf3df 228 Gene3D G3DSA:1.20.120.530 79 217 1.5E-31 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_1404 69da2224a6d00d62d257b69442dbf3df 228 SMART SM00345 16 74 2.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1404 69da2224a6d00d62d257b69442dbf3df 228 SUPERFAMILY SSF46785 7 99 3.92E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1404 69da2224a6d00d62d257b69442dbf3df 228 Pfam PF07729 FCD domain 84 206 2.5E-29 T 14-10-2018 IPR011711 GntR, C-terminal TMO_1404 69da2224a6d00d62d257b69442dbf3df 228 Gene3D G3DSA:1.10.10.10 1 75 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1404 69da2224a6d00d62d257b69442dbf3df 228 SMART SM00895 84 208 3.5E-23 T 14-10-2018 IPR011711 GntR, C-terminal TMO_1404 69da2224a6d00d62d257b69442dbf3df 228 SUPERFAMILY SSF48008 80 215 7.06E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_1404 69da2224a6d00d62d257b69442dbf3df 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 3.5E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_1156 e5130a22ca6db5dbe0088677921dd624 183 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 9 174 7.9E-51 T 14-10-2018 IPR006286 Deglycase PfpI TMO_1156 e5130a22ca6db5dbe0088677921dd624 183 Pfam PF01965 DJ-1/PfpI family 8 175 5.8E-51 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_1156 e5130a22ca6db5dbe0088677921dd624 183 SUPERFAMILY SSF52317 7 176 8.2E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1156 e5130a22ca6db5dbe0088677921dd624 183 Gene3D G3DSA:3.40.50.880 3 181 3.3E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_2278 75f07525e6ef56147b79c117bc10a433 176 SUPERFAMILY SSF54637 24 156 7.47E-28 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_2278 75f07525e6ef56147b79c117bc10a433 176 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 34 151 1.7E-19 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_2278 75f07525e6ef56147b79c117bc10a433 176 Gene3D G3DSA:3.10.129.10 18 156 1.0E-31 T 14-10-2018 TMO_2278 75f07525e6ef56147b79c117bc10a433 176 Pfam PF03061 Thioesterase superfamily 64 134 2.5E-10 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_b0390 b5d6fcd24e5aac258cf2158c6fdc31f2 197 Pfam PF06821 Serine hydrolase 48 151 1.1E-14 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 TMO_b0390 b5d6fcd24e5aac258cf2158c6fdc31f2 197 SUPERFAMILY SSF53474 46 152 4.45E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0390 b5d6fcd24e5aac258cf2158c6fdc31f2 197 Gene3D G3DSA:3.40.50.1820 11 170 8.9E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0882 9f8f52a5cb7ade96f7fbda515d6d6292 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 203 373 1.4E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0882 9f8f52a5cb7ade96f7fbda515d6d6292 384 SUPERFAMILY SSF161098 180 359 1.0E-17 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0882 9f8f52a5cb7ade96f7fbda515d6d6292 384 Gene3D G3DSA:1.10.3720.10 174 375 1.3E-12 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0033 3f98e227f43dd75ab426cf28a864f490 86 SUPERFAMILY SSF47413 4 65 3.1E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_b0033 3f98e227f43dd75ab426cf28a864f490 86 Pfam PF01381 Helix-turn-helix 7 42 2.6E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_b0033 3f98e227f43dd75ab426cf28a864f490 86 SMART SM00530 6 63 2.0E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_b0033 3f98e227f43dd75ab426cf28a864f490 86 Gene3D G3DSA:1.10.260.40 1 80 1.2E-19 T 14-10-2018 TMO_3296 f572f5bb17c68204e35c7a52e0e5da73 274 PIRSF PIRSF016184 1 260 6.8E-50 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_3296 f572f5bb17c68204e35c7a52e0e5da73 274 Pfam PF02567 Phenazine biosynthesis-like protein 4 256 6.1E-56 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_3296 f572f5bb17c68204e35c7a52e0e5da73 274 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 259 1.0E-29 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_3296 f572f5bb17c68204e35c7a52e0e5da73 274 SUPERFAMILY SSF54506 2 258 4.29E-69 T 14-10-2018 TMO_3296 f572f5bb17c68204e35c7a52e0e5da73 274 Gene3D G3DSA:3.10.310.10 115 249 8.9E-74 T 14-10-2018 TMO_3296 f572f5bb17c68204e35c7a52e0e5da73 274 Gene3D G3DSA:3.10.310.10 2 253 8.9E-74 T 14-10-2018 TMO_a0358 3ac37cb8fadea18359394a47c92308e8 414 Pfam PF01420 Type I restriction modification DNA specificity domain 99 177 2.0E-4 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TMO_a0358 3ac37cb8fadea18359394a47c92308e8 414 Pfam PF01420 Type I restriction modification DNA specificity domain 216 395 4.5E-15 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TMO_a0358 3ac37cb8fadea18359394a47c92308e8 414 Gene3D G3DSA:3.90.220.20 210 407 6.3E-25 T 14-10-2018 TMO_a0358 3ac37cb8fadea18359394a47c92308e8 414 Gene3D G3DSA:3.90.220.20 10 199 2.9E-25 T 14-10-2018 TMO_a0358 3ac37cb8fadea18359394a47c92308e8 414 SUPERFAMILY SSF116734 3 199 6.54E-32 T 14-10-2018 TMO_a0358 3ac37cb8fadea18359394a47c92308e8 414 SUPERFAMILY SSF116734 204 406 3.92E-32 T 14-10-2018 TMO_c0046 2d0b0887733b2e6be77bfe28d61ded24 156 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 85 132 3.7E-18 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 TMO_c0046 2d0b0887733b2e6be77bfe28d61ded24 156 Pfam PF12728 Helix-turn-helix domain 85 133 3.7E-10 T 14-10-2018 TMO_1397 55413c1831dc47319d2d44f2d3af8433 264 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 134 151 4.4E-5 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial TMO_1397 55413c1831dc47319d2d44f2d3af8433 264 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 200 211 4.4E-5 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial TMO_1397 55413c1831dc47319d2d44f2d3af8433 264 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 189 199 4.4E-5 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial TMO_1397 55413c1831dc47319d2d44f2d3af8433 264 Pfam PF01478 Type IV leader peptidase family 126 232 8.3E-11 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 TMO_1780 6b6d0e7429b18b03c123ae4997115c37 242 PIRSF PIRSF005650 4 242 3.2E-94 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 TMO_1780 6b6d0e7429b18b03c123ae4997115c37 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 6 239 45.245 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 TMO_1780 6b6d0e7429b18b03c123ae4997115c37 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 239 2.4E-100 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 TMO_1780 6b6d0e7429b18b03c123ae4997115c37 242 Pfam PF00696 Amino acid kinase family 10 218 1.2E-28 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TMO_1780 6b6d0e7429b18b03c123ae4997115c37 242 SUPERFAMILY SSF53633 7 239 4.97E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TMO_1780 6b6d0e7429b18b03c123ae4997115c37 242 Gene3D G3DSA:3.40.1160.10 3 242 3.0E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TMO_0040 95ec24f47f6c64c37e122bf6fcc00c59 181 Gene3D G3DSA:1.20.141.10 2 177 5.2E-36 T 14-10-2018 TMO_0040 95ec24f47f6c64c37e122bf6fcc00c59 181 Pfam PF05838 Glycosyl hydrolase 108 12 102 7.8E-12 T 14-10-2018 IPR008565 Protein of unknown function DUF847 TMO_0040 95ec24f47f6c64c37e122bf6fcc00c59 181 Pfam PF09374 Predicted Peptidoglycan domain 108 167 3.1E-11 T 14-10-2018 IPR018537 Peptidoglycan binding domain TMO_0040 95ec24f47f6c64c37e122bf6fcc00c59 181 SUPERFAMILY SSF53955 5 170 2.17E-35 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_0926 972b4fc5a154121660b105d99b6fac67 383 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 310 1.7E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_a0105 85b725784a615fd0e6dc427572363de9 134 Pfam PF09722 Protein of unknown function (DUF2384) 79 132 1.8E-11 T 14-10-2018 IPR024467 Domain of unknown function DUF2384 TMO_a0105 85b725784a615fd0e6dc427572363de9 134 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 20 128 9.0E-39 T 14-10-2018 IPR020358 Uncharacterised protein family Y4oB TMO_a0476 c82dbae5c1b444a58ddd16c4a4d7c6f5 2521 Pfam PF01476 LysM domain 1566 1610 0.0027 T 14-10-2018 IPR018392 LysM domain TMO_3385 cc36b6317801b4db121e0dc1cc22fd90 427 Gene3D G3DSA:2.40.40.10 58 409 1.3E-134 T 14-10-2018 IPR036908 RlpA-like domain superfamily TMO_3385 cc36b6317801b4db121e0dc1cc22fd90 427 SUPERFAMILY SSF50685 48 411 1.26E-132 T 14-10-2018 IPR036908 RlpA-like domain superfamily TMO_3385 cc36b6317801b4db121e0dc1cc22fd90 427 Pfam PF03562 MltA specific insert domain 64 310 2.0E-85 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 TMO_3385 cc36b6317801b4db121e0dc1cc22fd90 427 Pfam PF06725 3D domain 329 407 3.2E-21 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 TMO_3385 cc36b6317801b4db121e0dc1cc22fd90 427 SMART SM00925 153 310 1.1E-91 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 TMO_3385 cc36b6317801b4db121e0dc1cc22fd90 427 Gene3D G3DSA:2.40.240.50 152 315 1.3E-134 T 14-10-2018 TMO_3385 cc36b6317801b4db121e0dc1cc22fd90 427 PIRSF PIRSF019422 1 419 4.4E-139 T 14-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A TMO_2359 5d67bb5a8cc46df397ea89f8998244e5 394 Gene3D G3DSA:2.40.30.170 208 310 1.6E-34 T 14-10-2018 TMO_2359 5d67bb5a8cc46df397ea89f8998244e5 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 256 5.0E-19 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_2359 5d67bb5a8cc46df397ea89f8998244e5 394 SUPERFAMILY SSF111369 42 250 7.45E-23 T 14-10-2018 TMO_2359 5d67bb5a8cc46df397ea89f8998244e5 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 28 262 1.2E-37 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_2359 5d67bb5a8cc46df397ea89f8998244e5 394 Gene3D G3DSA:2.40.420.20 311 389 2.4E-13 T 14-10-2018 TMO_2359 5d67bb5a8cc46df397ea89f8998244e5 394 Gene3D G3DSA:1.10.287.470 84 175 3.0E-19 T 14-10-2018 TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 SUPERFAMILY SSF49493 164 234 4.19E-13 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 Gene3D G3DSA:2.60.260.20 226 303 5.8E-32 T 14-10-2018 TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 Gene3D G3DSA:2.60.260.20 164 223 9.4E-16 T 14-10-2018 TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 Pfam PF01556 DnaJ C terminal domain 167 303 4.1E-34 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 SUPERFAMILY SSF49493 231 305 1.7E-21 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 SUPERFAMILY SSF46565 5 107 7.98E-25 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 Pfam PF00226 DnaJ domain 5 66 1.3E-24 T 14-10-2018 IPR001623 DnaJ domain TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 Gene3D G3DSA:1.10.287.110 2 133 1.3E-26 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 SMART SM00271 3 61 1.4E-24 T 14-10-2018 IPR001623 DnaJ domain TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 PRINTS PR00625 DnaJ domain signature 132 151 3.6E-19 T 14-10-2018 IPR001623 DnaJ domain TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 PRINTS PR00625 DnaJ domain signature 6 24 3.6E-19 T 14-10-2018 IPR001623 DnaJ domain TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 PRINTS PR00625 DnaJ domain signature 41 61 3.6E-19 T 14-10-2018 IPR001623 DnaJ domain TMO_2121 3fff609fa09b5413e8b9f2438f4d9398 332 PRINTS PR00625 DnaJ domain signature 24 39 3.6E-19 T 14-10-2018 IPR001623 DnaJ domain TMO_2673 e35cc05ac687671ba4990cc0c7e8a74d 302 SMART SM00987 136 288 4.3E-40 T 14-10-2018 TMO_2673 e35cc05ac687671ba4990cc0c7e8a74d 302 Gene3D G3DSA:3.40.470.10 99 298 5.6E-68 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_2673 e35cc05ac687671ba4990cc0c7e8a74d 302 SUPERFAMILY SSF52141 111 296 3.27E-61 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_2673 e35cc05ac687671ba4990cc0c7e8a74d 302 Pfam PF03167 Uracil DNA glycosylase superfamily 138 287 1.0E-42 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_2673 e35cc05ac687671ba4990cc0c7e8a74d 302 SMART SM00986 136 288 4.3E-40 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_2673 e35cc05ac687671ba4990cc0c7e8a74d 302 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 123 295 2.1E-61 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 TMO_0220 12a9dd8d223a808d700310553e26ddc6 142 PIRSF PIRSF008546 3 142 1.1E-52 T 14-10-2018 IPR014937 Protein of unknown function DUF1810 TMO_0220 12a9dd8d223a808d700310553e26ddc6 142 SUPERFAMILY SSF140736 6 141 1.83E-54 T 14-10-2018 IPR036287 Rv1873-like superfamily TMO_0220 12a9dd8d223a808d700310553e26ddc6 142 Pfam PF08837 Protein of unknown function (DUF1810) 8 141 1.6E-52 T 14-10-2018 IPR014937 Protein of unknown function DUF1810 TMO_0220 12a9dd8d223a808d700310553e26ddc6 142 Gene3D G3DSA:1.25.40.380 1 142 2.3E-52 T 14-10-2018 IPR036287 Rv1873-like superfamily TMO_c0162 03653d5bb5ea88d70bf0c3bba31365aa 236 Pfam PF00293 NUDIX domain 43 126 1.7E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_c0162 03653d5bb5ea88d70bf0c3bba31365aa 236 Gene3D G3DSA:3.90.79.10 33 201 1.9E-51 T 14-10-2018 TMO_c0162 03653d5bb5ea88d70bf0c3bba31365aa 236 SUPERFAMILY SSF55811 38 195 4.47E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TMO_b0335 15bfc36574960b832e5aeaa8a1de76e9 556 Pfam PF00664 ABC transporter transmembrane region 15 160 2.0E-10 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TMO_b0335 15bfc36574960b832e5aeaa8a1de76e9 556 SMART SM00382 358 534 1.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0335 15bfc36574960b832e5aeaa8a1de76e9 556 Pfam PF00005 ABC transporter 351 485 4.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0335 15bfc36574960b832e5aeaa8a1de76e9 556 SUPERFAMILY SSF52540 344 543 2.8E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0335 15bfc36574960b832e5aeaa8a1de76e9 556 Gene3D G3DSA:3.40.50.300 331 552 3.3E-37 T 14-10-2018 TMO_b0335 15bfc36574960b832e5aeaa8a1de76e9 556 SUPERFAMILY SSF90123 5 305 1.57E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_b0335 15bfc36574960b832e5aeaa8a1de76e9 556 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 3 536 3.7E-193 T 14-10-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015833|GO:0016021|GO:1904680 TMO_b0335 15bfc36574960b832e5aeaa8a1de76e9 556 Gene3D G3DSA:1.20.1560.10 1 306 1.3E-27 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_0837 beaa66c6ff3a31c73547ff810d6a83cf 174 Gene3D G3DSA:3.40.50.7700 3 173 9.7E-71 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TMO_0837 beaa66c6ff3a31c73547ff810d6a83cf 174 SUPERFAMILY SSF52255 15 168 1.29E-63 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TMO_0837 beaa66c6ff3a31c73547ff810d6a83cf 174 SMART SM01001 14 165 3.9E-100 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TMO_0837 beaa66c6ff3a31c73547ff810d6a83cf 174 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 16 166 4.7E-64 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TMO_0837 beaa66c6ff3a31c73547ff810d6a83cf 174 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 16 169 31.997 T 14-10-2018 IPR033747 Class I PurE TMO_0837 beaa66c6ff3a31c73547ff810d6a83cf 174 Pfam PF00731 AIR carboxylase 16 162 1.8E-62 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TMO_0837 beaa66c6ff3a31c73547ff810d6a83cf 174 PIRSF PIRSF001338 11 173 1.0E-66 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 TMO_b0468 4eaa2ce20b12f2a8b43d6e5f1bb77b74 200 SUPERFAMILY SSF52833 1 77 1.47E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_b0468 4eaa2ce20b12f2a8b43d6e5f1bb77b74 200 Gene3D G3DSA:1.20.1050.10 85 200 8.7E-35 T 14-10-2018 TMO_b0468 4eaa2ce20b12f2a8b43d6e5f1bb77b74 200 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 3.2E-17 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_b0468 4eaa2ce20b12f2a8b43d6e5f1bb77b74 200 Gene3D G3DSA:3.40.30.10 1 84 9.5E-24 T 14-10-2018 TMO_b0468 4eaa2ce20b12f2a8b43d6e5f1bb77b74 200 SUPERFAMILY SSF47616 93 197 3.01E-10 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_1004 d1471e12fe57ec29c75dd0b65e4a0d0e 140 Gene3D G3DSA:3.40.50.2300 1 133 7.0E-31 T 14-10-2018 TMO_1004 d1471e12fe57ec29c75dd0b65e4a0d0e 140 SMART SM00226 1 134 2.1E-14 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TMO_1004 d1471e12fe57ec29c75dd0b65e4a0d0e 140 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 129 1.1E-13 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TMO_1004 d1471e12fe57ec29c75dd0b65e4a0d0e 140 SUPERFAMILY SSF52788 1 131 1.3E-32 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily TMO_0653 a8720e718211e26d186532da84fa0a3d 196 SUPERFAMILY SSF46689 144 189 1.33E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0653 a8720e718211e26d186532da84fa0a3d 196 SUPERFAMILY SSF52172 35 132 5.73E-7 T 14-10-2018 IPR011006 CheY-like superfamily TMO_0653 a8720e718211e26d186532da84fa0a3d 196 Pfam PF02954 Bacterial regulatory protein, Fis family 156 189 1.2E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_0653 a8720e718211e26d186532da84fa0a3d 196 Gene3D G3DSA:1.10.10.60 144 187 3.6E-10 T 14-10-2018 TMO_a0247 2f4fa8f4d5688a79849255db8c937d25 502 SUPERFAMILY SSF52540 273 490 1.94E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0247 2f4fa8f4d5688a79849255db8c937d25 502 Pfam PF00005 ABC transporter 24 173 2.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0247 2f4fa8f4d5688a79849255db8c937d25 502 Pfam PF00005 ABC transporter 280 431 1.5E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0247 2f4fa8f4d5688a79849255db8c937d25 502 Gene3D G3DSA:3.40.50.300 1 242 5.8E-53 T 14-10-2018 TMO_a0247 2f4fa8f4d5688a79849255db8c937d25 502 SMART SM00382 33 220 8.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0247 2f4fa8f4d5688a79849255db8c937d25 502 SMART SM00382 286 480 0.054 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0247 2f4fa8f4d5688a79849255db8c937d25 502 SUPERFAMILY SSF52540 7 230 1.68E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0247 2f4fa8f4d5688a79849255db8c937d25 502 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0247 2f4fa8f4d5688a79849255db8c937d25 502 Gene3D G3DSA:3.40.50.300 264 501 2.8E-44 T 14-10-2018 TMO_2872 0d30faca9d0b977c83f60a8f77c271da 337 Pfam PF01551 Peptidase family M23 207 302 5.3E-29 T 14-10-2018 IPR016047 Peptidase M23 TMO_2872 0d30faca9d0b977c83f60a8f77c271da 337 SUPERFAMILY SSF51261 113 304 6.15E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif TMO_2872 0d30faca9d0b977c83f60a8f77c271da 337 Gene3D G3DSA:2.70.70.10 155 310 6.7E-45 T 14-10-2018 IPR011055 Duplicated hybrid motif TMO_c0467 072fba5fd0ae7d5aee9e3ebde02d8341 175 SUPERFAMILY SSF51182 8 164 3.38E-42 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0467 072fba5fd0ae7d5aee9e3ebde02d8341 175 Pfam PF04115 Ureidoglycolate lyase 8 164 5.7E-42 T 14-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 TMO_c0467 072fba5fd0ae7d5aee9e3ebde02d8341 175 PIRSF PIRSF017306 8 162 1.5E-27 T 14-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 TMO_c0467 072fba5fd0ae7d5aee9e3ebde02d8341 175 Gene3D G3DSA:2.60.120.480 7 169 2.7E-44 T 14-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 TMO_c0677 7f8dc9c586a41855aed22418d2b406ae 216 Pfam PF13649 Methyltransferase domain 64 161 2.8E-6 T 14-10-2018 TMO_c0677 7f8dc9c586a41855aed22418d2b406ae 216 SUPERFAMILY SSF53335 47 173 4.03E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0677 7f8dc9c586a41855aed22418d2b406ae 216 Gene3D G3DSA:3.40.50.150 42 175 1.6E-13 T 14-10-2018 TMO_0398 9e5c47dad2929fdea27009bdfd5aefc7 653 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 38 641 3.5E-144 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ TMO_0398 9e5c47dad2929fdea27009bdfd5aefc7 653 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 131 566 7.0E-70 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_c0169 046004cd29a8e85678cbc88179253fec 451 Gene3D G3DSA:2.40.50.820 102 186 2.4E-33 T 14-10-2018 TMO_c0169 046004cd29a8e85678cbc88179253fec 451 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 75 408 6.2E-64 T 14-10-2018 IPR003776 YcaO-like domain TMO_c0169 046004cd29a8e85678cbc88179253fec 451 TIGRFAM TIGR03604 TOMM_cyclo_SagD: thiazole/oxazole-forming peptide maturase, SagD family component 73 451 4.3E-76 T 14-10-2018 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component TMO_c0169 046004cd29a8e85678cbc88179253fec 451 Gene3D G3DSA:1.10.490.140 83 412 2.4E-33 T 14-10-2018 TMO_c0169 046004cd29a8e85678cbc88179253fec 451 Gene3D G3DSA:3.30.160.660 223 359 2.4E-33 T 14-10-2018 TMO_b0273 1d0f572b7d9cc7e2a21567b41c9dca09 262 SMART SM00419 180 228 2.6E-8 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_b0273 1d0f572b7d9cc7e2a21567b41c9dca09 262 Gene3D G3DSA:2.60.120.10 36 149 5.6E-17 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_b0273 1d0f572b7d9cc7e2a21567b41c9dca09 262 Gene3D G3DSA:1.10.10.10 157 244 1.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0273 1d0f572b7d9cc7e2a21567b41c9dca09 262 SUPERFAMILY SSF51206 15 154 1.57E-16 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like TMO_b0273 1d0f572b7d9cc7e2a21567b41c9dca09 262 Pfam PF00027 Cyclic nucleotide-binding domain 43 126 5.8E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_b0273 1d0f572b7d9cc7e2a21567b41c9dca09 262 Pfam PF13545 Crp-like helix-turn-helix domain 160 234 9.5E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_b0273 1d0f572b7d9cc7e2a21567b41c9dca09 262 SUPERFAMILY SSF46785 157 250 8.16E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0373 fa66be148cce4c7b66d36209cf9ee359 346 Pfam PF12697 Alpha/beta hydrolase family 84 294 5.9E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0373 fa66be148cce4c7b66d36209cf9ee359 346 SUPERFAMILY SSF53474 10 298 3.16E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0373 fa66be148cce4c7b66d36209cf9ee359 346 PIRSF PIRSF031982 4 345 6.4E-88 T 14-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 2.3E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 67 78 2.3E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 128 2.3E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 9.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 9.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 9.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 9.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 127 155 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 Gene3D G3DSA:3.40.50.720 1 250 1.1E-57 T 14-10-2018 TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 Pfam PF00106 short chain dehydrogenase 2 181 6.7E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0195 ef20f890467ac4364fdf7e80065e3b9c 251 SUPERFAMILY SSF51735 1 240 1.71E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0041 69ee0182a0a7c8fa6dc6ae1ff5a2df07 288 SUPERFAMILY SSF161098 80 267 2.88E-25 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0041 69ee0182a0a7c8fa6dc6ae1ff5a2df07 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 286 1.3E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0041 69ee0182a0a7c8fa6dc6ae1ff5a2df07 288 Gene3D G3DSA:1.10.3720.10 73 288 6.1E-21 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1480 8a4ebb8c8d033b27dc3d1a7db539ef9a 211 SUPERFAMILY SSF81452 15 210 9.55E-42 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1480 8a4ebb8c8d033b27dc3d1a7db539ef9a 211 Pfam PF00510 Cytochrome c oxidase subunit III 23 209 4.9E-13 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_1480 8a4ebb8c8d033b27dc3d1a7db539ef9a 211 Gene3D G3DSA:1.20.120.80 16 211 1.1E-48 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_b0141 94e51278697f8566fd2b918af183c697 353 Pfam PF00701 Dihydrodipicolinate synthetase family 27 217 5.9E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_b0141 94e51278697f8566fd2b918af183c697 353 SUPERFAMILY SSF51569 21 332 8.16E-33 T 14-10-2018 TMO_b0141 94e51278697f8566fd2b918af183c697 353 Gene3D G3DSA:3.20.20.70 20 336 1.7E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_b0141 94e51278697f8566fd2b918af183c697 353 SMART SM01130 17 336 5.3E-9 T 14-10-2018 IPR002220 DapA-like GO:0016829 TMO_a0049 f87ce009f485799bcdc1ee899b2734d1 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site TMO_a0049 f87ce009f485799bcdc1ee899b2734d1 159 Gene3D G3DSA:3.30.70.920 59 143 5.9E-22 T 14-10-2018 TMO_a0049 f87ce009f485799bcdc1ee899b2734d1 159 Gene3D G3DSA:1.10.10.10 7 57 2.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0049 f87ce009f485799bcdc1ee899b2734d1 159 SMART SM00344 6 115 1.4E-33 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_a0049 f87ce009f485799bcdc1ee899b2734d1 159 Pfam PF01037 Lrp/AsnC ligand binding domain 81 146 2.3E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_a0049 f87ce009f485799bcdc1ee899b2734d1 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 1.3E-19 T 14-10-2018 TMO_a0049 f87ce009f485799bcdc1ee899b2734d1 159 SUPERFAMILY SSF54909 66 155 1.61E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_a0049 f87ce009f485799bcdc1ee899b2734d1 159 SUPERFAMILY SSF46785 6 65 1.78E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0049 f87ce009f485799bcdc1ee899b2734d1 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.5E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_a0049 f87ce009f485799bcdc1ee899b2734d1 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.5E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_a0049 f87ce009f485799bcdc1ee899b2734d1 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.5E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0424 dc928869b543c535df66b592384fc7cd 212 Gene3D G3DSA:3.30.1060.10 22 200 7.0E-62 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TMO_c0424 dc928869b543c535df66b592384fc7cd 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 36 186 4.9E-52 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TMO_c0424 dc928869b543c535df66b592384fc7cd 212 Pfam PF01625 Peptide methionine sulfoxide reductase 36 188 6.1E-58 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TMO_c0424 dc928869b543c535df66b592384fc7cd 212 SUPERFAMILY SSF55068 32 200 9.03E-68 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TMO_c0424 dc928869b543c535df66b592384fc7cd 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 34 194 35.122 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TMO_b0123 1f0af139a6df4d59032d638dfea5927f 352 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 352 213.728 T 14-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 TMO_b0123 1f0af139a6df4d59032d638dfea5927f 352 SUPERFAMILY SSF51569 17 288 1.7E-63 T 14-10-2018 TMO_b0123 1f0af139a6df4d59032d638dfea5927f 352 SUPERFAMILY SSF89000 300 348 2.16E-18 T 14-10-2018 TMO_b0123 1f0af139a6df4d59032d638dfea5927f 352 Pfam PF00682 HMGL-like 18 274 1.8E-66 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_b0123 1f0af139a6df4d59032d638dfea5927f 352 Pfam PF07836 DmpG-like communication domain 286 347 2.3E-31 T 14-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 TMO_b0123 1f0af139a6df4d59032d638dfea5927f 352 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 17 348 1.7E-173 T 14-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 TMO_b0123 1f0af139a6df4d59032d638dfea5927f 352 Gene3D G3DSA:3.20.20.70 12 280 2.8E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_b0123 1f0af139a6df4d59032d638dfea5927f 352 Gene3D G3DSA:1.10.8.60 287 351 4.1E-32 T 14-10-2018 TMO_b0123 1f0af139a6df4d59032d638dfea5927f 352 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 284 345 1.0E-23 T 14-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 TMO_a0163 c8c9c4be30ed11e468f8a36e5f3fbefa 262 Pfam PF00005 ABC transporter 21 169 1.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0163 c8c9c4be30ed11e468f8a36e5f3fbefa 262 SMART SM00382 28 221 1.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0163 c8c9c4be30ed11e468f8a36e5f3fbefa 262 SUPERFAMILY SSF52540 2 241 6.35E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0163 c8c9c4be30ed11e468f8a36e5f3fbefa 262 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0163 c8c9c4be30ed11e468f8a36e5f3fbefa 262 Gene3D G3DSA:3.40.50.300 1 243 2.7E-53 T 14-10-2018 TMO_0956 c960238872383cc310bd5cfff97a7cc7 650 SMART SM00382 35 222 8.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0956 c960238872383cc310bd5cfff97a7cc7 650 Pfam PF02687 FtsX-like permease family 557 643 4.9E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TMO_0956 c960238872383cc310bd5cfff97a7cc7 650 SUPERFAMILY SSF52540 9 228 3.9E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0956 c960238872383cc310bd5cfff97a7cc7 650 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0956 c960238872383cc310bd5cfff97a7cc7 650 Gene3D G3DSA:3.40.50.300 7 255 2.0E-67 T 14-10-2018 TMO_0956 c960238872383cc310bd5cfff97a7cc7 650 Pfam PF12704 MacB-like periplasmic core domain 276 495 1.7E-29 T 14-10-2018 IPR025857 MacB-like periplasmic core domain TMO_0956 c960238872383cc310bd5cfff97a7cc7 650 Pfam PF00005 ABC transporter 26 174 3.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0416 515e652460186d891eb29552b1d4a846 263 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0416 515e652460186d891eb29552b1d4a846 263 Pfam PF00005 ABC transporter 33 189 6.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0416 515e652460186d891eb29552b1d4a846 263 Gene3D G3DSA:3.40.50.300 15 262 6.7E-56 T 14-10-2018 TMO_a0416 515e652460186d891eb29552b1d4a846 263 SMART SM00382 41 236 1.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0416 515e652460186d891eb29552b1d4a846 263 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 236 258 9.3E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_a0416 515e652460186d891eb29552b1d4a846 263 SUPERFAMILY SSF52540 15 258 1.11E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0154 3033269aaebd9876d86cd16ffee906f8 100 Gene3D G3DSA:1.10.1220.10 2 49 4.8E-12 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TMO_b0154 3033269aaebd9876d86cd16ffee906f8 100 Pfam PF04221 RelB antitoxin 4 48 1.0E-13 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TMO_b0154 3033269aaebd9876d86cd16ffee906f8 100 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 55 1.1E-14 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TMO_c0003 8ab2ac5bee2cdded03d7621fd1c7a6b2 365 Gene3D G3DSA:1.20.1600.10 1 364 1.0E-28 T 14-10-2018 TMO_c0003 8ab2ac5bee2cdded03d7621fd1c7a6b2 365 Pfam PF02321 Outer membrane efflux protein 192 363 2.1E-9 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_c0003 8ab2ac5bee2cdded03d7621fd1c7a6b2 365 Pfam PF02321 Outer membrane efflux protein 6 167 1.3E-9 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_c0003 8ab2ac5bee2cdded03d7621fd1c7a6b2 365 SUPERFAMILY SSF56954 2 361 8.11E-35 T 14-10-2018 TMO_c0828 44210bae5d0c8a246c8f062f5415c976 292 SUPERFAMILY SSF46689 217 266 3.49E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0828 44210bae5d0c8a246c8f062f5415c976 292 Gene3D G3DSA:1.10.10.60 162 275 9.3E-25 T 14-10-2018 TMO_c0828 44210bae5d0c8a246c8f062f5415c976 292 Pfam PF12833 Helix-turn-helix domain 188 264 2.8E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0828 44210bae5d0c8a246c8f062f5415c976 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 259 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_c0828 44210bae5d0c8a246c8f062f5415c976 292 SMART SM00342 181 263 1.1E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2746 f97950f14758d9baf81259667b6d78ea 219 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 198 34.105 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 TMO_2746 f97950f14758d9baf81259667b6d78ea 219 Pfam PF01351 Ribonuclease HII 19 196 9.3E-37 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain TMO_2746 f97950f14758d9baf81259667b6d78ea 219 SUPERFAMILY SSF53098 13 204 8.19E-64 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_2746 f97950f14758d9baf81259667b6d78ea 219 Gene3D G3DSA:3.30.420.10 5 217 2.4E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_c0551 60a2399ecdbe09c5d6a9222dfe63114c 306 Gene3D G3DSA:1.10.10.60 200 304 2.6E-23 T 14-10-2018 TMO_c0551 60a2399ecdbe09c5d6a9222dfe63114c 306 SUPERFAMILY SSF46689 251 301 5.82E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0551 60a2399ecdbe09c5d6a9222dfe63114c 306 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_c0551 60a2399ecdbe09c5d6a9222dfe63114c 306 Pfam PF12852 Cupin 4 181 1.4E-35 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain TMO_c0551 60a2399ecdbe09c5d6a9222dfe63114c 306 Pfam PF12833 Helix-turn-helix domain 221 298 2.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0551 60a2399ecdbe09c5d6a9222dfe63114c 306 SUPERFAMILY SSF46689 198 248 2.15E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0551 60a2399ecdbe09c5d6a9222dfe63114c 306 SUPERFAMILY SSF51182 17 69 6.56E-5 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0551 60a2399ecdbe09c5d6a9222dfe63114c 306 SMART SM00342 215 298 1.1E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0599 641196dc1739efe9de2889ca1ac712f1 80 Pfam PF13560 Helix-turn-helix domain 10 64 5.4E-9 T 14-10-2018 TMO_a0599 641196dc1739efe9de2889ca1ac712f1 80 TIGRFAM TIGR03070 couple_hipB: transcriptional regulator, y4mF family 10 64 4.0E-23 T 14-10-2018 IPR017507 Transcription regulator, HipB-like TMO_a0599 641196dc1739efe9de2889ca1ac712f1 80 Gene3D G3DSA:1.10.260.40 1 76 4.1E-15 T 14-10-2018 TMO_a0599 641196dc1739efe9de2889ca1ac712f1 80 SMART SM00530 14 69 6.1E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_a0599 641196dc1739efe9de2889ca1ac712f1 80 SUPERFAMILY SSF47413 9 69 1.46E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_c0753 ff50cfc29db490f40692953e5e40d751 389 SUPERFAMILY SSF103473 13 381 2.09E-43 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0753 ff50cfc29db490f40692953e5e40d751 389 Gene3D G3DSA:1.20.1250.20 13 380 2.4E-33 T 14-10-2018 TMO_c0753 ff50cfc29db490f40692953e5e40d751 389 Pfam PF07690 Major Facilitator Superfamily 17 232 4.2E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_b0540 d93a428c5fdda278fa72829e8186c06b 417 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 3 409 1.1E-215 T 14-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 TMO_b0540 d93a428c5fdda278fa72829e8186c06b 417 SUPERFAMILY SSF54373 262 341 9.02E-5 T 14-10-2018 TMO_b0540 d93a428c5fdda278fa72829e8186c06b 417 Gene3D G3DSA:3.50.50.60 34 390 1.1E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0540 d93a428c5fdda278fa72829e8186c06b 417 Gene3D G3DSA:3.30.9.10 115 347 1.1E-108 T 14-10-2018 TMO_b0540 d93a428c5fdda278fa72829e8186c06b 417 SUPERFAMILY SSF51905 32 407 4.86E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0540 d93a428c5fdda278fa72829e8186c06b 417 Pfam PF01266 FAD dependent oxidoreductase 34 381 2.4E-61 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_0898 cd6f6bf0e291fda41143440c437726c8 166 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 7.4E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_0898 cd6f6bf0e291fda41143440c437726c8 166 SUPERFAMILY SSF53098 1 157 1.48E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_0898 cd6f6bf0e291fda41143440c437726c8 166 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 151 5.8E-44 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_0898 cd6f6bf0e291fda41143440c437726c8 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 7.9E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_0898 cd6f6bf0e291fda41143440c437726c8 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 7.9E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_0898 cd6f6bf0e291fda41143440c437726c8 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 7.9E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_0898 cd6f6bf0e291fda41143440c437726c8 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 7.9E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_0898 cd6f6bf0e291fda41143440c437726c8 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 7.9E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_0898 cd6f6bf0e291fda41143440c437726c8 166 Gene3D G3DSA:3.30.420.10 1 159 2.8E-47 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_0898 cd6f6bf0e291fda41143440c437726c8 166 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 44.248 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_a0060 17b8e988f3e93b714e556990c7b07cd6 91 Gene3D G3DSA:3.40.630.30 14 77 2.5E-6 T 14-10-2018 TMO_0143 9d9b642377151b80cf152820790230c2 230 SUPERFAMILY SSF53335 28 194 2.37E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0143 9d9b642377151b80cf152820790230c2 230 Gene3D G3DSA:3.40.50.150 35 200 1.3E-22 T 14-10-2018 TMO_0143 9d9b642377151b80cf152820790230c2 230 Pfam PF07021 Methionine biosynthesis protein MetW 31 225 3.1E-80 T 14-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 TMO_0143 9d9b642377151b80cf152820790230c2 230 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 31 225 9.3E-76 T 14-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 TMO_3210 96b0166c344ce872e568060e19a29f43 59 Gene3D G3DSA:2.60.260.40 1 50 8.3E-21 T 14-10-2018 TMO_3210 96b0166c344ce872e568060e19a29f43 59 Pfam PF10276 Zinc-finger domain 12 47 1.5E-17 T 14-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_b0228 b85111b2548c5e69f55fde4208dd7fda 293 Gene3D G3DSA:3.20.20.100 8 292 1.8E-62 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_b0228 b85111b2548c5e69f55fde4208dd7fda 293 Pfam PF00248 Aldo/keto reductase family 19 280 7.9E-48 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_b0228 b85111b2548c5e69f55fde4208dd7fda 293 SUPERFAMILY SSF51430 14 286 1.13E-63 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_c0564 b41300eca0be2a09a23df5270afd6aef 339 Pfam PF16868 NMT1-like family 53 336 1.7E-90 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_c0564 b41300eca0be2a09a23df5270afd6aef 339 Gene3D G3DSA:3.40.190.10 53 336 8.8E-98 T 14-10-2018 TMO_c0564 b41300eca0be2a09a23df5270afd6aef 339 Gene3D G3DSA:3.40.190.10 137 273 8.8E-98 T 14-10-2018 TMO_c0564 b41300eca0be2a09a23df5270afd6aef 339 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 27 336 3.2E-112 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_c0564 b41300eca0be2a09a23df5270afd6aef 339 SUPERFAMILY SSF53850 48 338 9.56E-75 T 14-10-2018 TMO_2615 c9626bcdddef498fc525f2e496b79570 187 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 170 35.972 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TMO_2615 c9626bcdddef498fc525f2e496b79570 187 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 170 6.7E-64 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TMO_2615 c9626bcdddef498fc525f2e496b79570 187 SUPERFAMILY SSF54768 15 82 5.86E-23 T 14-10-2018 TMO_2615 c9626bcdddef498fc525f2e496b79570 187 Pfam PF03719 Ribosomal protein S5, C-terminal domain 94 164 1.3E-29 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_2615 c9626bcdddef498fc525f2e496b79570 187 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site TMO_2615 c9626bcdddef498fc525f2e496b79570 187 SUPERFAMILY SSF54211 86 165 3.03E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_2615 c9626bcdddef498fc525f2e496b79570 187 Gene3D G3DSA:3.30.160.20 8 79 1.2E-29 T 14-10-2018 TMO_2615 c9626bcdddef498fc525f2e496b79570 187 Gene3D G3DSA:3.30.230.10 82 174 5.5E-34 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_2615 c9626bcdddef498fc525f2e496b79570 187 Pfam PF00333 Ribosomal protein S5, N-terminal domain 18 81 2.7E-28 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_0715 9bc82fcaf6e1ba59952219d358359773 473 Pfam PF00483 Nucleotidyl transferase 6 287 1.5E-66 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TMO_0715 9bc82fcaf6e1ba59952219d358359773 473 Gene3D G3DSA:2.60.120.10 350 458 9.3E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_0715 9bc82fcaf6e1ba59952219d358359773 473 SUPERFAMILY SSF51182 186 470 2.15E-79 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_0715 9bc82fcaf6e1ba59952219d358359773 473 Pfam PF01050 Mannose-6-phosphate isomerase 316 466 1.9E-70 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 TMO_0715 9bc82fcaf6e1ba59952219d358359773 473 Gene3D G3DSA:3.90.550.10 3 349 8.7E-112 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_0715 9bc82fcaf6e1ba59952219d358359773 473 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 469 4.2E-204 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 TMO_0715 9bc82fcaf6e1ba59952219d358359773 473 SUPERFAMILY SSF53448 4 282 1.48E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_b0436 b9767776f0b2d2fe1b454a1913bc432f 521 SUPERFAMILY SSF56801 11 519 6.67E-136 T 14-10-2018 TMO_b0436 b9767776f0b2d2fe1b454a1913bc432f 521 Pfam PF00501 AMP-binding enzyme 21 416 2.9E-80 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0436 b9767776f0b2d2fe1b454a1913bc432f 521 Gene3D G3DSA:3.40.50.12780 7 409 5.5E-94 T 14-10-2018 TMO_b0436 b9767776f0b2d2fe1b454a1913bc432f 521 Gene3D G3DSA:3.30.300.310 412 520 7.4E-32 T 14-10-2018 TMO_b0436 b9767776f0b2d2fe1b454a1913bc432f 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 508 9.1E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0914 7ba1b36ff7d76e855d9a7969804ff047 279 Gene3D G3DSA:3.40.1190.20 1 269 4.4E-34 T 14-10-2018 IPR029056 Ribokinase-like TMO_0914 7ba1b36ff7d76e855d9a7969804ff047 279 SUPERFAMILY SSF53613 10 187 5.67E-27 T 14-10-2018 IPR029056 Ribokinase-like TMO_0914 7ba1b36ff7d76e855d9a7969804ff047 279 Pfam PF08543 Phosphomethylpyrimidine kinase 20 244 4.7E-30 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 TMO_c0207 131b4c7a92510f55fe58b35cecbe160b 105 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 30 103 8.9E-42 T 14-10-2018 IPR020955 Uncharacterised protein family Atu4866 TMO_c0207 131b4c7a92510f55fe58b35cecbe160b 105 Gene3D G3DSA:2.40.128.290 29 104 8.4E-40 T 14-10-2018 IPR038646 Atu4866-like superfamily TMO_2908 d082c43d13e1ff02253ea09b8913f51e 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 8.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2908 d082c43d13e1ff02253ea09b8913f51e 200 Gene3D G3DSA:1.10.357.10 8 165 5.5E-15 T 14-10-2018 TMO_2908 d082c43d13e1ff02253ea09b8913f51e 200 SUPERFAMILY SSF46689 5 71 3.79E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0494 73d2a21ab3753796f5b79a7f67d6a32c 382 Gene3D G3DSA:3.40.190.290 171 381 3.1E-37 T 14-10-2018 TMO_c0494 73d2a21ab3753796f5b79a7f67d6a32c 382 Gene3D G3DSA:1.10.10.10 83 166 3.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0494 73d2a21ab3753796f5b79a7f67d6a32c 382 SUPERFAMILY SSF53850 168 377 5.55E-38 T 14-10-2018 TMO_c0494 73d2a21ab3753796f5b79a7f67d6a32c 382 SUPERFAMILY SSF46785 83 166 1.86E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0494 73d2a21ab3753796f5b79a7f67d6a32c 382 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 86 142 5.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0494 73d2a21ab3753796f5b79a7f67d6a32c 382 Pfam PF03466 LysR substrate binding domain 167 374 3.2E-42 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_3202 8a5360c6833c1e50136854f90c93d0f3 315 Gene3D G3DSA:3.20.20.70 6 307 1.4E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3202 8a5360c6833c1e50136854f90c93d0f3 315 Pfam PF00682 HMGL-like 11 288 7.2E-45 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_3202 8a5360c6833c1e50136854f90c93d0f3 315 SUPERFAMILY SSF51569 8 291 7.69E-63 T 14-10-2018 TMO_b0140 015c199d8696b377dc8b1673d89f1815 264 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0140 015c199d8696b377dc8b1673d89f1815 264 Gene3D G3DSA:3.40.50.300 14 231 7.4E-58 T 14-10-2018 TMO_b0140 015c199d8696b377dc8b1673d89f1815 264 SMART SM00382 44 242 8.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0140 015c199d8696b377dc8b1673d89f1815 264 Pfam PF00005 ABC transporter 36 175 2.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0140 015c199d8696b377dc8b1673d89f1815 264 SUPERFAMILY SSF52540 15 244 9.98E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3304 94d0a3fecf17dbffdcad0c232ff5590f 295 SUPERFAMILY SSF161098 55 283 9.94E-50 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3304 94d0a3fecf17dbffdcad0c232ff5590f 295 Gene3D G3DSA:1.10.3720.10 51 294 3.9E-58 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3304 94d0a3fecf17dbffdcad0c232ff5590f 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 293 8.2E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2614 03ee89c26fbb9c848127b3f35d94ed05 64 SUPERFAMILY SSF55129 6 63 2.09E-21 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily TMO_2614 03ee89c26fbb9c848127b3f35d94ed05 64 Pfam PF00327 Ribosomal protein L30p/L7e 8 58 8.9E-18 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain TMO_2614 03ee89c26fbb9c848127b3f35d94ed05 64 Gene3D G3DSA:3.30.1390.20 6 64 1.6E-25 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily TMO_2614 03ee89c26fbb9c848127b3f35d94ed05 64 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 8 62 1.7E-26 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2614 03ee89c26fbb9c848127b3f35d94ed05 64 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 4 62 19.034 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2614 03ee89c26fbb9c848127b3f35d94ed05 64 PIRSF PIRSF002211 1 64 1.7E-25 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_b0352 20297599a69cfcb36be3f2dd8e0041f3 358 SUPERFAMILY SSF52540 4 241 1.26E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0352 20297599a69cfcb36be3f2dd8e0041f3 358 Pfam PF00005 ABC transporter 21 161 2.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0352 20297599a69cfcb36be3f2dd8e0041f3 358 Gene3D G3DSA:3.40.50.300 1 238 4.2E-73 T 14-10-2018 TMO_b0352 20297599a69cfcb36be3f2dd8e0041f3 358 Pfam PF08402 TOBE domain 276 355 4.0E-12 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_b0352 20297599a69cfcb36be3f2dd8e0041f3 358 SUPERFAMILY SSF50331 237 354 2.49E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_b0352 20297599a69cfcb36be3f2dd8e0041f3 358 SMART SM00382 28 211 5.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0352 20297599a69cfcb36be3f2dd8e0041f3 358 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0531 2461d6994cf89da86e5e66ca4d8113c5 81 Gene3D G3DSA:1.10.8.1250 10 80 2.0E-14 T 14-10-2018 IPR038296 Antitoxin ParD superfamily TMO_b0531 2461d6994cf89da86e5e66ca4d8113c5 81 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 74 4.4E-12 T 14-10-2018 IPR022789 Antitoxin ParD TMO_b0531 2461d6994cf89da86e5e66ca4d8113c5 81 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 70 4.7E-21 T 14-10-2018 IPR022789 Antitoxin ParD TMO_b0531 2461d6994cf89da86e5e66ca4d8113c5 81 SUPERFAMILY SSF47598 1 45 2.22E-10 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_1637 2093f4131691d36069f3a15d5c4d26eb 330 SUPERFAMILY SSF56300 53 296 8.36E-33 T 14-10-2018 TMO_1637 2093f4131691d36069f3a15d5c4d26eb 330 Gene3D G3DSA:3.60.21.10 53 288 5.8E-16 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like TMO_1637 2093f4131691d36069f3a15d5c4d26eb 330 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 56 270 4.4E-11 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 TMO_c0891 49104b487bafac5cea32f1aef4a57127 327 Gene3D G3DSA:3.40.50.970 1 309 3.6E-103 T 14-10-2018 TMO_c0891 49104b487bafac5cea32f1aef4a57127 327 SUPERFAMILY SSF52518 2 303 1.3E-83 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_c0891 49104b487bafac5cea32f1aef4a57127 327 Pfam PF00676 Dehydrogenase E1 component 2 295 1.4E-64 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 TMO_0599 30b085a76b912b085d3c0e3b46086ab0 458 ProSitePatterns PS00455 Putative AMP-binding domain signature. 135 146 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0599 30b085a76b912b085d3c0e3b46086ab0 458 Gene3D G3DSA:3.40.50.12780 1 356 4.5E-59 T 14-10-2018 TMO_0599 30b085a76b912b085d3c0e3b46086ab0 458 SUPERFAMILY SSF56801 6 451 3.4E-86 T 14-10-2018 TMO_0599 30b085a76b912b085d3c0e3b46086ab0 458 Pfam PF00501 AMP-binding enzyme 126 361 1.1E-37 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0599 30b085a76b912b085d3c0e3b46086ab0 458 Gene3D G3DSA:3.30.300.30 357 456 6.7E-17 T 14-10-2018 TMO_0599 30b085a76b912b085d3c0e3b46086ab0 458 Pfam PF13193 AMP-binding enzyme C-terminal domain 370 448 2.9E-13 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_2913 307287f26af2d74e036d36483fe6def7 154 Pfam PF12098 Protein of unknown function (DUF3574) 46 154 1.5E-32 T 14-10-2018 IPR021957 Protein of unknown function DUF3574 TMO_c0346 2b6a1290713644c3a371dc18359953ff 541 Gene3D G3DSA:3.40.190.10 219 526 1.4E-99 T 14-10-2018 TMO_c0346 2b6a1290713644c3a371dc18359953ff 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 458 1.1E-81 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_c0346 2b6a1290713644c3a371dc18359953ff 541 SUPERFAMILY SSF53850 36 539 1.05E-108 T 14-10-2018 TMO_c0346 2b6a1290713644c3a371dc18359953ff 541 PIRSF PIRSF002741 9 534 7.4E-83 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_c0346 2b6a1290713644c3a371dc18359953ff 541 Gene3D G3DSA:3.10.105.10 302 516 1.4E-99 T 14-10-2018 TMO_c0346 2b6a1290713644c3a371dc18359953ff 541 Gene3D G3DSA:3.90.76.10 68 218 1.4E-99 T 14-10-2018 TMO_2159 09381379daf6908f4a020943dcd333cf 343 Gene3D G3DSA:1.10.287.470 105 171 2.6E-5 T 14-10-2018 TMO_2159 09381379daf6908f4a020943dcd333cf 343 Gene3D G3DSA:1.10.287.470 68 102 3.4E-14 T 14-10-2018 TMO_2159 09381379daf6908f4a020943dcd333cf 343 Gene3D G3DSA:2.40.30.170 237 290 2.5E-15 T 14-10-2018 TMO_2159 09381379daf6908f4a020943dcd333cf 343 Pfam PF13533 Biotin-lipoyl like 37 82 4.0E-13 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TMO_2159 09381379daf6908f4a020943dcd333cf 343 Gene3D G3DSA:1.10.287.470 177 201 2.5E-15 T 14-10-2018 TMO_2159 09381379daf6908f4a020943dcd333cf 343 Gene3D G3DSA:2.40.50.100 202 236 2.5E-15 T 14-10-2018 TMO_2159 09381379daf6908f4a020943dcd333cf 343 Gene3D G3DSA:2.40.50.100 34 67 3.4E-14 T 14-10-2018 TMO_2159 09381379daf6908f4a020943dcd333cf 343 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 46 66 2.9E-5 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_2159 09381379daf6908f4a020943dcd333cf 343 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 315 330 2.9E-5 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_2159 09381379daf6908f4a020943dcd333cf 343 SUPERFAMILY SSF111369 176 280 4.32E-7 T 14-10-2018 TMO_2159 09381379daf6908f4a020943dcd333cf 343 Pfam PF13437 HlyD family secretion protein 202 306 1.6E-12 T 14-10-2018 TMO_2159 09381379daf6908f4a020943dcd333cf 343 SUPERFAMILY SSF111369 29 104 4.05E-10 T 14-10-2018 TMO_0123 e8c092f04f2338d47fe33a689fe8da81 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 TMO_0123 e8c092f04f2338d47fe33a689fe8da81 249 PIRSF PIRSF000090 1 249 1.5E-87 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 TMO_0123 e8c092f04f2338d47fe33a689fe8da81 249 Gene3D G3DSA:3.40.50.620 1 247 1.3E-89 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_0123 e8c092f04f2338d47fe33a689fe8da81 249 Pfam PF01012 Electron transfer flavoprotein domain 29 203 7.1E-48 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TMO_0123 e8c092f04f2338d47fe33a689fe8da81 249 SMART SM00893 23 211 4.0E-72 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TMO_0123 e8c092f04f2338d47fe33a689fe8da81 249 SUPERFAMILY SSF52402 1 242 5.23E-87 T 14-10-2018 TMO_c0361 a1b35ca9f83da196a928e967706af915 340 Gene3D G3DSA:3.40.190.170 34 339 3.0E-71 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_c0361 a1b35ca9f83da196a928e967706af915 340 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 322 4.2E-54 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_0670 73f88b87fcc66a39197e3bf0f02d3fc2 127 Pfam PF01850 PIN domain 2 115 8.3E-9 T 14-10-2018 IPR002716 PIN domain TMO_0670 73f88b87fcc66a39197e3bf0f02d3fc2 127 Gene3D G3DSA:3.40.50.1010 1 117 1.3E-20 T 14-10-2018 TMO_0670 73f88b87fcc66a39197e3bf0f02d3fc2 127 SUPERFAMILY SSF88723 2 124 5.61E-15 T 14-10-2018 IPR029060 PIN-like domain superfamily TMO_c0938 aee1dc8402ecd6bc56f39f4a356064d0 96 SUPERFAMILY SSF47413 28 89 9.09E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_c0938 aee1dc8402ecd6bc56f39f4a356064d0 96 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 5 91 6.3E-32 T 14-10-2018 IPR014057 Uncharacterized protein HI1420 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 Gene3D G3DSA:1.10.287.130 247 317 1.0E-21 T 14-10-2018 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 Gene3D G3DSA:3.30.565.10 320 495 2.1E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 488 4.4E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 SUPERFAMILY SSF47384 245 316 1.35E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 Gene3D G3DSA:3.40.50.2300 511 640 1.1E-25 T 14-10-2018 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 Gene3D G3DSA:3.30.450.20 121 246 1.4E-9 T 14-10-2018 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 SUPERFAMILY SSF52172 516 637 1.57E-27 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 487 7.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 7.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 7.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 7.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 316 7.8E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 SMART SM00448 518 632 8.6E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 SUPERFAMILY SSF55874 308 488 2.88E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 Pfam PF00072 Response regulator receiver domain 520 632 1.8E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 SMART SM00387 359 490 1.2E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 Pfam PF13188 PAS domain 127 164 2.5E-5 T 14-10-2018 IPR000014 PAS domain TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 SUPERFAMILY SSF55785 125 203 3.77E-6 T 14-10-2018 IPR035965 PAS domain superfamily TMO_1127 112fab82b99fa4dc9068edbe7108aa5c 641 SMART SM00388 252 318 3.8E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_2644 80c32f2b83b3079e33299a5dfd52198a 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 4.3E-29 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal TMO_2644 80c32f2b83b3079e33299a5dfd52198a 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.9E-62 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2644 80c32f2b83b3079e33299a5dfd52198a 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.055 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TMO_2644 80c32f2b83b3079e33299a5dfd52198a 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 5.7E-22 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_2644 80c32f2b83b3079e33299a5dfd52198a 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 7.0E-14 T 14-10-2018 TMO_2644 80c32f2b83b3079e33299a5dfd52198a 142 Gene3D G3DSA:1.10.10.2720 73 142 2.4E-24 T 14-10-2018 TMO_2644 80c32f2b83b3079e33299a5dfd52198a 142 SUPERFAMILY SSF46906 68 140 2.22E-23 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily TMO_2644 80c32f2b83b3079e33299a5dfd52198a 142 Gene3D G3DSA:3.30.1550.10 2 72 3.3E-35 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TMO_2644 80c32f2b83b3079e33299a5dfd52198a 142 SUPERFAMILY SSF54747 3 72 8.76E-31 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TMO_2644 80c32f2b83b3079e33299a5dfd52198a 142 SMART SM00649 9 141 7.6E-78 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 254 273 3.9E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 301 317 3.9E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 274 293 3.9E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 390 407 3.9E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 344 363 3.9E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 458 476 3.9E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 157 177 3.9E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 413 434 3.9E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 Gene3D G3DSA:1.10.1370.30 1 509 3.1E-179 T 14-10-2018 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 PIRSF PIRSF006615 1 510 9.5E-167 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 SUPERFAMILY SSF55486 1 507 1.36E-107 T 14-10-2018 TMO_2805 b4fedbbe77dee8928fa398fa0f544b71 512 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 11 505 6.8E-76 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 TMO_3528 96746d1c752004475420c457b63385f6 148 SUPERFAMILY SSF46785 6 133 5.83E-38 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3528 96746d1c752004475420c457b63385f6 148 Gene3D G3DSA:3.30.1490.190 86 140 7.1E-19 T 14-10-2018 TMO_3528 96746d1c752004475420c457b63385f6 148 Pfam PF01475 Ferric uptake regulator family 12 131 7.7E-41 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TMO_3528 96746d1c752004475420c457b63385f6 148 Gene3D G3DSA:1.10.10.10 2 85 6.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 Gene3D G3DSA:3.40.50.720 8 262 4.3E-68 T 14-10-2018 TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 SUPERFAMILY SSF51735 3 263 1.17E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 Pfam PF00106 short chain dehydrogenase 8 184 1.1E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 3.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 3.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 199 4.6E-4 T 14-10-2018 TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 3.7E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.7E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.7E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.7E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0272 5d7e024118b81255183cdb762cf3da3d 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.7E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0009 2e8e8d70a7a70b1b6f36b3ac2c79353f 188 Pfam PF01292 Prokaryotic cytochrome b561 10 183 8.8E-12 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 TMO_a0009 2e8e8d70a7a70b1b6f36b3ac2c79353f 188 SUPERFAMILY SSF81342 9 183 1.49E-11 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 TMO_3056 0a36271cb76f32548c5d34c3d78638e1 144 SUPERFAMILY SSF55174 45 131 7.33E-23 T 14-10-2018 TMO_3056 0a36271cb76f32548c5d34c3d78638e1 144 Pfam PF01479 S4 domain 46 93 2.3E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_3056 0a36271cb76f32548c5d34c3d78638e1 144 SMART SM00363 46 109 7.6E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_3056 0a36271cb76f32548c5d34c3d78638e1 144 Gene3D G3DSA:3.10.290.10 40 139 3.1E-31 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TMO_0234 9eef40ee84772c05199b8113ce7fd99c 200 Gene3D G3DSA:1.10.3210.10 41 197 1.1E-15 T 14-10-2018 TMO_0234 9eef40ee84772c05199b8113ce7fd99c 200 Pfam PF01966 HD domain 62 130 4.9E-6 T 14-10-2018 IPR006674 HD domain TMO_0234 9eef40ee84772c05199b8113ce7fd99c 200 SUPERFAMILY SSF109604 19 164 4.81E-25 T 14-10-2018 TMO_3517 b3c27269e2c41a36ad2b037572c7243f 155 Pfam PF00376 MerR family regulatory protein 16 52 7.9E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_3517 b3c27269e2c41a36ad2b037572c7243f 155 Pfam PF09278 MerR, DNA binding 57 122 1.8E-15 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding TMO_3517 b3c27269e2c41a36ad2b037572c7243f 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 27 40 5.9E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_3517 b3c27269e2c41a36ad2b037572c7243f 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 50 70 5.9E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_3517 b3c27269e2c41a36ad2b037572c7243f 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 27 5.9E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_3517 b3c27269e2c41a36ad2b037572c7243f 155 SMART SM00422 15 83 3.0E-23 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_3517 b3c27269e2c41a36ad2b037572c7243f 155 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 15 153 4.6E-63 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 TMO_3517 b3c27269e2c41a36ad2b037572c7243f 155 SUPERFAMILY SSF46955 15 137 1.32E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily TMO_3517 b3c27269e2c41a36ad2b037572c7243f 155 ProSitePatterns PS00552 MerR-type HTH domain signature. 18 40 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_3517 b3c27269e2c41a36ad2b037572c7243f 155 Gene3D G3DSA:1.10.1660.10 6 138 7.9E-33 T 14-10-2018 TMO_c0354 4111924bf407d56c019ab9af1896591b 399 SUPERFAMILY SSF103473 13 396 3.4E-46 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0354 4111924bf407d56c019ab9af1896591b 399 Pfam PF07690 Major Facilitator Superfamily 30 281 4.2E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0354 4111924bf407d56c019ab9af1896591b 399 Gene3D G3DSA:1.20.1250.20 13 392 2.5E-38 T 14-10-2018 TMO_1852 409d31658ed163190aee4bce969feaab 291 Pfam PF00398 Ribosomal RNA adenine dimethylase 24 284 2.6E-45 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm TMO_1852 409d31658ed163190aee4bce969feaab 291 Gene3D G3DSA:1.10.8.100 224 290 1.4E-21 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 TMO_1852 409d31658ed163190aee4bce969feaab 291 SMART SM00650 39 219 1.8E-62 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 TMO_1852 409d31658ed163190aee4bce969feaab 291 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 58 86 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 TMO_1852 409d31658ed163190aee4bce969feaab 291 Gene3D G3DSA:3.40.50.150 2 223 4.5E-64 T 14-10-2018 TMO_1852 409d31658ed163190aee4bce969feaab 291 SUPERFAMILY SSF53335 22 286 2.61E-68 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1852 409d31658ed163190aee4bce969feaab 291 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 24 284 2.8E-69 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TMO_1852 409d31658ed163190aee4bce969feaab 291 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 23 286 47.966 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TMO_0181 a15a9135481d68db085474b5266d8022 330 PIRSF PIRSF004692 3 330 4.3E-127 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 TMO_0181 a15a9135481d68db085474b5266d8022 330 Pfam PF01380 SIS domain 51 180 2.4E-28 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TMO_0181 a15a9135481d68db085474b5266d8022 330 SUPERFAMILY SSF53697 20 330 8.23E-60 T 14-10-2018 TMO_0181 a15a9135481d68db085474b5266d8022 330 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 320 2.8E-92 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 TMO_0181 a15a9135481d68db085474b5266d8022 330 SMART SM00116 218 266 0.013 T 14-10-2018 IPR000644 CBS domain TMO_0181 a15a9135481d68db085474b5266d8022 330 SMART SM00116 281 329 0.43 T 14-10-2018 IPR000644 CBS domain TMO_0181 a15a9135481d68db085474b5266d8022 330 Gene3D G3DSA:3.10.580.10 205 327 2.0E-40 T 14-10-2018 TMO_0181 a15a9135481d68db085474b5266d8022 330 Gene3D G3DSA:3.40.50.10490 10 204 3.1E-58 T 14-10-2018 TMO_0181 a15a9135481d68db085474b5266d8022 330 Pfam PF00571 CBS domain 210 264 8.8E-6 T 14-10-2018 IPR000644 CBS domain TMO_0181 a15a9135481d68db085474b5266d8022 330 Pfam PF00571 CBS domain 274 327 3.2E-8 T 14-10-2018 IPR000644 CBS domain TMO_b0374 38414f1d9e0e8f299703cb6da1540114 280 Gene3D G3DSA:1.10.3720.10 5 272 3.6E-58 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0374 38414f1d9e0e8f299703cb6da1540114 280 SUPERFAMILY SSF161098 8 280 2.15E-63 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0374 38414f1d9e0e8f299703cb6da1540114 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 270 1.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 7.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 7.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 7.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 7.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 7.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 7.2E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 254 2.9E-65 T 14-10-2018 TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 SUPERFAMILY SSF51735 12 257 1.24E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 Gene3D G3DSA:3.40.50.720 4 259 6.7E-82 T 14-10-2018 TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 6.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 6.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0913 57d3c8b3d8000940b50e78fa546a16a2 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 6.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0307 5d669970cf5391ed44395a2eaf4a5435 216 Gene3D G3DSA:3.40.50.1470 1 187 3.9E-62 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TMO_0307 5d669970cf5391ed44395a2eaf4a5435 216 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 32.303 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TMO_0307 5d669970cf5391ed44395a2eaf4a5435 216 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 164 9.1E-49 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TMO_0307 5d669970cf5391ed44395a2eaf4a5435 216 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 TMO_0307 5d669970cf5391ed44395a2eaf4a5435 216 SUPERFAMILY SSF53178 1 183 9.81E-66 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TMO_0307 5d669970cf5391ed44395a2eaf4a5435 216 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 TMO_0307 5d669970cf5391ed44395a2eaf4a5435 216 Pfam PF01195 Peptidyl-tRNA hydrolase 3 172 4.2E-50 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TMO_a0598 33d8b310f45551c4e0cbd91b9a085573 422 Pfam PF07804 HipA-like C-terminal domain 148 381 2.8E-53 T 14-10-2018 IPR012893 HipA-like, C-terminal TMO_a0598 33d8b310f45551c4e0cbd91b9a085573 422 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 5 103 1.3E-27 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 TMO_a0598 33d8b310f45551c4e0cbd91b9a085573 422 Pfam PF13657 HipA N-terminal domain 5 103 1.6E-23 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 TMO_2162 ea01026aa98387d5afaa0889137d7097 298 Gene3D G3DSA:3.20.20.70 2 297 2.6E-61 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2162 ea01026aa98387d5afaa0889137d7097 298 Pfam PF05853 beta-keto acid cleavage enzyme 8 296 1.4E-59 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 TMO_d0065 69f46e68bc39d1d5a72ef51efdefa9ca 305 Gene3D G3DSA:3.40.50.1000 16 294 3.2E-66 T 14-10-2018 IPR023214 HAD superfamily TMO_d0065 69f46e68bc39d1d5a72ef51efdefa9ca 305 Pfam PF12710 haloacid dehalogenase-like hydrolase 92 258 1.9E-20 T 14-10-2018 TMO_d0065 69f46e68bc39d1d5a72ef51efdefa9ca 305 SUPERFAMILY SSF56784 89 298 2.71E-45 T 14-10-2018 IPR036412 HAD-like superfamily TMO_d0065 69f46e68bc39d1d5a72ef51efdefa9ca 305 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 86 293 1.5E-59 T 14-10-2018 TMO_d0065 69f46e68bc39d1d5a72ef51efdefa9ca 305 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 90 259 4.7E-28 T 14-10-2018 TMO_0194 63da0ef1b52fa06e19930ce74a6f88ef 323 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 86 304 1.2E-23 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 TMO_0194 63da0ef1b52fa06e19930ce74a6f88ef 323 Gene3D G3DSA:3.40.50.2000 175 323 5.9E-31 T 14-10-2018 TMO_0194 63da0ef1b52fa06e19930ce74a6f88ef 323 SUPERFAMILY SSF53756 18 322 4.39E-59 T 14-10-2018 TMO_0194 63da0ef1b52fa06e19930ce74a6f88ef 323 Gene3D G3DSA:3.40.50.2000 14 163 9.2E-18 T 14-10-2018 TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 SUPERFAMILY SSF52540 273 500 5.09E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 Pfam PF00005 ABC transporter 2 159 5.8E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 480 512 2.9E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 211 243 3.7E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 SMART SM00382 286 478 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 SMART SM00382 10 209 3.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 Pfam PF00005 ABC transporter 278 428 1.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 SUPERFAMILY SSF52540 2 231 7.34E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 Gene3D G3DSA:3.40.50.300 254 522 6.5E-80 T 14-10-2018 TMO_b0040 5a342497e7793b23f8758e3813cc7b4e 527 Gene3D G3DSA:3.40.50.300 1 253 8.6E-75 T 14-10-2018 TMO_c0206 9d1ea7f5c9cb2cf5025352743f1ceab5 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 17 39 9.3E-5 T 14-10-2018 TMO_c0206 9d1ea7f5c9cb2cf5025352743f1ceab5 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 9.3E-5 T 14-10-2018 TMO_c0206 9d1ea7f5c9cb2cf5025352743f1ceab5 426 SUPERFAMILY SSF51905 14 376 3.89E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0206 9d1ea7f5c9cb2cf5025352743f1ceab5 426 TIGRFAM TIGR04046 MSMEG_0569_nitr: flavin-dependent oxidoreductase, MSMEG_0569 family 17 415 6.8E-206 T 14-10-2018 IPR024000 Conserved hypothetical protein CHP04046, FMN-dependent TMO_c0206 9d1ea7f5c9cb2cf5025352743f1ceab5 426 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 20 211 1.5E-19 T 14-10-2018 TMO_c0206 9d1ea7f5c9cb2cf5025352743f1ceab5 426 Gene3D G3DSA:3.50.50.60 278 425 1.7E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0206 9d1ea7f5c9cb2cf5025352743f1ceab5 426 Gene3D G3DSA:3.50.50.60 10 266 1.5E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1773 d3176d00aba20e3d68592af649cea161 195 SUPERFAMILY SSF111384 38 179 1.1E-25 T 14-10-2018 TMO_1773 d3176d00aba20e3d68592af649cea161 195 SMART SM00935 23 179 2.0E-33 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TMO_1773 d3176d00aba20e3d68592af649cea161 195 Pfam PF03938 Outer membrane protein (OmpH-like) 24 178 5.9E-26 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TMO_1773 d3176d00aba20e3d68592af649cea161 195 Gene3D G3DSA:3.30.910.20 25 195 4.8E-33 T 14-10-2018 IPR024930 Skp domain superfamily TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 3.1E-54 T 14-10-2018 TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 Gene3D G3DSA:3.40.50.720 2 252 1.6E-75 T 14-10-2018 TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 9.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 9.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 9.9E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0369 bcc30e28221c5b9087af5df264a0b585 252 SUPERFAMILY SSF51735 4 251 6.11E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0474 56ccfbeef4a09e10379c9970d234e42f 521 Pfam PF00501 AMP-binding enzyme 8 419 5.0E-79 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0474 56ccfbeef4a09e10379c9970d234e42f 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 503 1.5E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0474 56ccfbeef4a09e10379c9970d234e42f 521 SUPERFAMILY SSF56801 3 516 2.09E-134 T 14-10-2018 TMO_0474 56ccfbeef4a09e10379c9970d234e42f 521 ProSitePatterns PS00455 Putative AMP-binding domain signature. 166 177 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0474 56ccfbeef4a09e10379c9970d234e42f 521 Gene3D G3DSA:3.40.50.12780 1 412 1.5E-92 T 14-10-2018 TMO_0474 56ccfbeef4a09e10379c9970d234e42f 521 Gene3D G3DSA:3.30.300.310 415 517 1.8E-31 T 14-10-2018 TMO_b0522 c97e42eff588bcfa801c00af7ac2c42c 208 SUPERFAMILY SSF52218 1 198 6.55E-59 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_b0522 c97e42eff588bcfa801c00af7ac2c42c 208 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 198 4.6E-92 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 TMO_b0522 c97e42eff588bcfa801c00af7ac2c42c 208 Pfam PF03358 NADPH-dependent FMN reductase 13 141 7.2E-14 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TMO_b0522 c97e42eff588bcfa801c00af7ac2c42c 208 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 201 47.067 T 14-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 TMO_b0522 c97e42eff588bcfa801c00af7ac2c42c 208 Gene3D G3DSA:3.40.50.360 1 201 4.5E-72 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_b0357 61d13cb216833cef25a5f736e3996602 335 Pfam PF16220 Domain of unknown function (DUF4880) 18 60 2.0E-9 T 14-10-2018 IPR032623 FecR, N-terminal TMO_b0357 61d13cb216833cef25a5f736e3996602 335 Gene3D G3DSA:2.60.120.1440 114 257 9.3E-22 T 14-10-2018 TMO_b0357 61d13cb216833cef25a5f736e3996602 335 Pfam PF16344 Domain of unknown function (DUF4974) 231 303 1.5E-8 T 14-10-2018 IPR032508 Protein FecR, C-terminal TMO_b0357 61d13cb216833cef25a5f736e3996602 335 Pfam PF04773 FecR protein 122 213 5.8E-16 T 14-10-2018 IPR006860 FecR protein TMO_b0357 61d13cb216833cef25a5f736e3996602 335 PIRSF PIRSF018266 7 334 3.2E-74 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_b0588 b5cb73d0127caa232546756f51be6eae 180 Gene3D G3DSA:3.40.630.30 12 168 2.0E-23 T 14-10-2018 TMO_b0588 b5cb73d0127caa232546756f51be6eae 180 Pfam PF00583 Acetyltransferase (GNAT) family 71 159 7.9E-11 T 14-10-2018 IPR000182 GNAT domain TMO_b0588 b5cb73d0127caa232546756f51be6eae 180 SUPERFAMILY SSF55729 26 178 4.18E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_1266 f12db595a3c68931c0f386be17102817 202 Pfam PF01471 Putative peptidoglycan binding domain 145 197 4.9E-14 T 14-10-2018 IPR002477 Peptidoglycan binding-like TMO_1266 f12db595a3c68931c0f386be17102817 202 SUPERFAMILY SSF47090 139 198 2.04E-14 T 14-10-2018 IPR036365 PGBD-like superfamily TMO_1266 f12db595a3c68931c0f386be17102817 202 TIGRFAM TIGR03979 His_Ser_Rich: His-Xaa-Ser repeat protein HxsA 62 200 4.5E-40 T 14-10-2018 IPR023928 Conserved hypothetical protein CHP03979 TMO_1266 f12db595a3c68931c0f386be17102817 202 Gene3D G3DSA:1.10.101.10 123 200 1.9E-11 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 TMO_2329 f46e020cbea95d87374f2f2f72ab62dd 419 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 107 396 4.3E-71 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_2329 f46e020cbea95d87374f2f2f72ab62dd 419 Gene3D G3DSA:3.40.50.1100 138 234 1.7E-99 T 14-10-2018 TMO_2329 f46e020cbea95d87374f2f2f72ab62dd 419 Gene3D G3DSA:3.40.50.1100 101 400 1.7E-99 T 14-10-2018 TMO_2329 f46e020cbea95d87374f2f2f72ab62dd 419 SUPERFAMILY SSF53686 73 410 9.3E-84 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_3181 0de73d829dd3bcc8800ddee1bc6015bd 426 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 35 361 1.2E-73 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_3181 0de73d829dd3bcc8800ddee1bc6015bd 426 Pfam PF16868 NMT1-like family 64 361 3.4E-69 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_3181 0de73d829dd3bcc8800ddee1bc6015bd 426 SUPERFAMILY SSF53850 60 361 2.75E-57 T 14-10-2018 TMO_3181 0de73d829dd3bcc8800ddee1bc6015bd 426 Gene3D G3DSA:3.40.190.10 64 361 1.5E-84 T 14-10-2018 TMO_3181 0de73d829dd3bcc8800ddee1bc6015bd 426 Gene3D G3DSA:3.40.190.10 162 298 1.5E-84 T 14-10-2018 TMO_1049 a12500bb80856b9e05c3fd3cc7ddd5bd 172 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 52 170 1.2E-29 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 TMO_1049 a12500bb80856b9e05c3fd3cc7ddd5bd 172 Gene3D G3DSA:2.40.128.520 48 172 9.8E-18 T 14-10-2018 TMO_0171 e7e624a83119e3bdb122ad428a162a19 99 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 12 91 6.3E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like TMO_0171 e7e624a83119e3bdb122ad428a162a19 99 Pfam PF00381 PTS HPr component phosphorylation site 13 91 1.4E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like TMO_0171 e7e624a83119e3bdb122ad428a162a19 99 Gene3D G3DSA:3.30.1340.10 9 91 1.4E-28 T 14-10-2018 IPR035895 HPr-like superfamily TMO_0171 e7e624a83119e3bdb122ad428a162a19 99 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 23 30 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site TMO_0171 e7e624a83119e3bdb122ad428a162a19 99 PRINTS PR00107 Phosphocarrier protein signature 48 63 2.0E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like TMO_0171 e7e624a83119e3bdb122ad428a162a19 99 PRINTS PR00107 Phosphocarrier protein signature 23 39 2.0E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like TMO_0171 e7e624a83119e3bdb122ad428a162a19 99 PRINTS PR00107 Phosphocarrier protein signature 63 80 2.0E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like TMO_0171 e7e624a83119e3bdb122ad428a162a19 99 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 49 64 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site TMO_0171 e7e624a83119e3bdb122ad428a162a19 99 SUPERFAMILY SSF55594 13 98 5.23E-27 T 14-10-2018 IPR035895 HPr-like superfamily TMO_1348 6ee61d1e090fdc48c49acd5bb1bb36fa 364 Gene3D G3DSA:3.40.367.20 131 336 1.4E-65 T 14-10-2018 TMO_1348 6ee61d1e090fdc48c49acd5bb1bb36fa 364 Gene3D G3DSA:3.30.420.40 34 130 1.4E-65 T 14-10-2018 TMO_1348 6ee61d1e090fdc48c49acd5bb1bb36fa 364 SUPERFAMILY SSF53067 36 344 8.11E-38 T 14-10-2018 TMO_1348 6ee61d1e090fdc48c49acd5bb1bb36fa 364 Pfam PF02685 Glucokinase 34 338 6.6E-61 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 TMO_1424 8cde52605750206196659f4df52dbaec 657 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 21 625 3.6E-185 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ TMO_1424 8cde52605750206196659f4df52dbaec 657 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 554 2.7E-92 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_3113 7577c4ff63942d04852a8c1bf396f281 299 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 1 299 5.9E-112 T 14-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B TMO_3113 7577c4ff63942d04852a8c1bf396f281 299 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 299 140.405 T 14-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B TMO_3113 7577c4ff63942d04852a8c1bf396f281 299 Gene3D G3DSA:3.60.15.10 1 299 1.6E-77 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_3113 7577c4ff63942d04852a8c1bf396f281 299 Pfam PF12706 Beta-lactamase superfamily domain 48 266 2.5E-43 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_3113 7577c4ff63942d04852a8c1bf396f281 299 SUPERFAMILY SSF56281 1 299 1.17E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_1367 4b257e767263c55f75e09ac1a7654268 358 Gene3D G3DSA:1.20.1420.20 31 358 1.5E-53 T 14-10-2018 IPR038352 Imelysin-like domain superfamily TMO_c0555 e3dec57c3fad9ad4be075cdf86751fc7 166 Gene3D G3DSA:1.10.1740.10 3 71 3.4E-8 T 14-10-2018 TMO_c0555 e3dec57c3fad9ad4be075cdf86751fc7 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 160 3.4E-18 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_c0555 e3dec57c3fad9ad4be075cdf86751fc7 166 Pfam PF04542 Sigma-70 region 2 6 71 6.0E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_c0555 e3dec57c3fad9ad4be075cdf86751fc7 166 Gene3D G3DSA:1.10.10.10 84 165 4.6E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0555 e3dec57c3fad9ad4be075cdf86751fc7 166 SUPERFAMILY SSF88946 4 69 2.43E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_c0555 e3dec57c3fad9ad4be075cdf86751fc7 166 Pfam PF08281 Sigma-70, region 4 107 153 6.1E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_c0555 e3dec57c3fad9ad4be075cdf86751fc7 166 SUPERFAMILY SSF88659 83 163 3.92E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_c0673 cea4c0461715407b9f65be2e174267bd 265 SUPERFAMILY SSF55781 72 250 1.57E-39 T 14-10-2018 TMO_c0673 cea4c0461715407b9f65be2e174267bd 265 Gene3D G3DSA:3.30.450.40 79 255 1.6E-42 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_c0673 cea4c0461715407b9f65be2e174267bd 265 Gene3D G3DSA:1.10.10.10 4 78 5.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0673 cea4c0461715407b9f65be2e174267bd 265 SMART SM00346 5 95 1.9E-18 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_c0673 cea4c0461715407b9f65be2e174267bd 265 Pfam PF09339 IclR helix-turn-helix domain 7 57 2.5E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_c0673 cea4c0461715407b9f65be2e174267bd 265 SUPERFAMILY SSF46785 6 78 1.41E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0673 cea4c0461715407b9f65be2e174267bd 265 Pfam PF01614 Bacterial transcriptional regulator 124 246 2.6E-27 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal TMO_2677 47b419eb26dc252b4ef1a84f30d3e6c1 281 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 202 280 3.6E-17 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 TMO_2677 47b419eb26dc252b4ef1a84f30d3e6c1 281 SUPERFAMILY SSF74653 195 278 1.83E-17 T 14-10-2018 TMO_2677 47b419eb26dc252b4ef1a84f30d3e6c1 281 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 204 280 5.5E-21 T 14-10-2018 IPR006260 TonB/TolA, C-terminal TMO_2677 47b419eb26dc252b4ef1a84f30d3e6c1 281 Gene3D G3DSA:3.30.1150.10 102 281 8.2E-30 T 14-10-2018 TMO_2677 47b419eb26dc252b4ef1a84f30d3e6c1 281 PRINTS PR01217 Proline rich extensin signature 75 91 2.6E-10 T 14-10-2018 TMO_2677 47b419eb26dc252b4ef1a84f30d3e6c1 281 PRINTS PR01217 Proline rich extensin signature 94 111 2.6E-10 T 14-10-2018 TMO_2677 47b419eb26dc252b4ef1a84f30d3e6c1 281 PRINTS PR01217 Proline rich extensin signature 113 138 2.6E-10 T 14-10-2018 TMO_2677 47b419eb26dc252b4ef1a84f30d3e6c1 281 PRINTS PR01217 Proline rich extensin signature 35 47 2.6E-10 T 14-10-2018 TMO_2677 47b419eb26dc252b4ef1a84f30d3e6c1 281 PRINTS PR01217 Proline rich extensin signature 54 75 2.6E-10 T 14-10-2018 TMO_3171 e8995d5875a2764fb37460b9c11c15bf 317 Gene3D G3DSA:3.20.10.10 141 291 2.6E-67 T 14-10-2018 TMO_3171 e8995d5875a2764fb37460b9c11c15bf 317 SUPERFAMILY SSF56752 13 297 7.85E-65 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 TMO_3171 e8995d5875a2764fb37460b9c11c15bf 317 Gene3D G3DSA:3.30.470.10 16 133 2.6E-67 T 14-10-2018 TMO_3171 e8995d5875a2764fb37460b9c11c15bf 317 Pfam PF01063 Amino-transferase class IV 41 264 7.6E-38 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 TMO_0265 892f90e614211e291b9f8433c25c321c 151 Pfam PF07310 PAS domain 14 145 3.6E-16 T 14-10-2018 IPR009922 Protein of unknown function DUF1457 TMO_1619 e0ea5c10af9fcc1b89d3c814665f9d3d 292 Pfam PF01564 Spermine/spermidine synthase domain 68 247 5.0E-49 T 14-10-2018 TMO_1619 e0ea5c10af9fcc1b89d3c814665f9d3d 292 SUPERFAMILY SSF53335 11 289 6.4E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1619 e0ea5c10af9fcc1b89d3c814665f9d3d 292 Pfam PF17284 Spermidine synthase tetramerisation domain 12 63 2.3E-14 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 TMO_1619 e0ea5c10af9fcc1b89d3c814665f9d3d 292 Gene3D G3DSA:2.30.140.10 10 61 6.7E-19 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 TMO_1619 e0ea5c10af9fcc1b89d3c814665f9d3d 292 TIGRFAM TIGR00417 speE: spermidine synthase 13 281 1.8E-79 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 TMO_1619 e0ea5c10af9fcc1b89d3c814665f9d3d 292 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 89 102 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 TMO_1619 e0ea5c10af9fcc1b89d3c814665f9d3d 292 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 12 290 35.653 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 TMO_1619 e0ea5c10af9fcc1b89d3c814665f9d3d 292 Gene3D G3DSA:3.40.50.150 67 289 3.0E-64 T 14-10-2018 TMO_0218 c3a39e134ca7ac0be88fdd8383d6ed62 253 Gene3D G3DSA:3.40.50.720 1 252 2.5E-79 T 14-10-2018 TMO_0218 c3a39e134ca7ac0be88fdd8383d6ed62 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.5E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0218 c3a39e134ca7ac0be88fdd8383d6ed62 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.5E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0218 c3a39e134ca7ac0be88fdd8383d6ed62 253 SUPERFAMILY SSF51735 2 251 7.42E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0218 c3a39e134ca7ac0be88fdd8383d6ed62 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 4.1E-66 T 14-10-2018 TMO_0218 c3a39e134ca7ac0be88fdd8383d6ed62 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0218 c3a39e134ca7ac0be88fdd8383d6ed62 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0218 c3a39e134ca7ac0be88fdd8383d6ed62 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0218 c3a39e134ca7ac0be88fdd8383d6ed62 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0218 c3a39e134ca7ac0be88fdd8383d6ed62 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0218 c3a39e134ca7ac0be88fdd8383d6ed62 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0273 dfe97097288c95f6e50fd341705a86bc 100 Gene3D G3DSA:1.10.10.10 1 98 1.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0273 dfe97097288c95f6e50fd341705a86bc 100 Pfam PF01638 HxlR-like helix-turn-helix 3 89 3.0E-25 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type TMO_c0273 dfe97097288c95f6e50fd341705a86bc 100 SUPERFAMILY SSF46785 2 87 5.25E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 83 108 8.8E-59 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 309 328 8.8E-59 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 478 493 8.8E-59 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 442 460 8.8E-59 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 158 176 8.8E-59 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 503 520 8.8E-59 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 176 195 8.8E-59 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 295 8.8E-59 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 420 438 8.8E-59 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 Gene3D G3DSA:3.60.20.40 420 601 2.1E-53 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 Gene3D G3DSA:1.10.246.130 295 400 5.9E-31 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 Pfam PF01019 Gamma-glutamyltranspeptidase 76 596 6.3E-141 T 14-10-2018 TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 SUPERFAMILY SSF56235 52 600 6.17E-154 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_c0339 af0f8668fc2406c38aa1bc09ff51ace6 601 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 62 593 6.0E-108 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 TMO_c0004 66f2d486ec97d7df1ab9676276819348 158 Pfam PF01609 Transposase DDE domain 1 154 2.1E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TMO_b0203 3f8c2582b009828948c92d96b8390832 145 Gene3D G3DSA:3.10.180.10 1 129 3.3E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0203 3f8c2582b009828948c92d96b8390832 145 SUPERFAMILY SSF54593 2 128 4.83E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0203 3f8c2582b009828948c92d96b8390832 145 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 110 7.2E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_a0220 cc188f22bba94fa9ab5ccb50ea0c2a05 513 Gene3D G3DSA:3.40.50.2000 20 450 4.1E-154 T 14-10-2018 TMO_a0220 cc188f22bba94fa9ab5ccb50ea0c2a05 513 Pfam PF00982 Glycosyltransferase family 20 13 454 1.1E-122 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 TMO_a0220 cc188f22bba94fa9ab5ccb50ea0c2a05 513 SUPERFAMILY SSF53756 1 455 1.07E-132 T 14-10-2018 TMO_a0220 cc188f22bba94fa9ab5ccb50ea0c2a05 513 Gene3D G3DSA:3.40.50.2000 231 439 4.1E-154 T 14-10-2018 TMO_b0561 1260ba426939ff13cccf89c672d44180 512 Gene3D G3DSA:3.30.300.310 398 500 1.1E-32 T 14-10-2018 TMO_b0561 1260ba426939ff13cccf89c672d44180 512 Gene3D G3DSA:3.40.50.12780 1 395 3.3E-98 T 14-10-2018 TMO_b0561 1260ba426939ff13cccf89c672d44180 512 Pfam PF00501 AMP-binding enzyme 10 402 1.4E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0561 1260ba426939ff13cccf89c672d44180 512 Pfam PF13193 AMP-binding enzyme C-terminal domain 411 486 2.8E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0561 1260ba426939ff13cccf89c672d44180 512 ProSitePatterns PS00455 Putative AMP-binding domain signature. 147 158 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0561 1260ba426939ff13cccf89c672d44180 512 SUPERFAMILY SSF56801 2 499 2.22E-136 T 14-10-2018 TMO_2363 3f27e7ab6ad8f056b224b8d48cc329f3 138 Gene3D G3DSA:3.30.720.110 70 125 2.9E-24 T 14-10-2018 TMO_2363 3f27e7ab6ad8f056b224b8d48cc329f3 138 SUPERFAMILY SSF54593 6 122 7.7E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_2363 3f27e7ab6ad8f056b224b8d48cc329f3 138 Gene3D G3DSA:3.30.720.120 2 55 7.9E-24 T 14-10-2018 TMO_2363 3f27e7ab6ad8f056b224b8d48cc329f3 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 120 2.1E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_c0291 d544590f294513857a7810afb7a97dc8 163 Pfam PF05981 CreA protein 33 160 1.7E-57 T 14-10-2018 IPR010292 Uncharacterised protein family CreA TMO_c0291 d544590f294513857a7810afb7a97dc8 163 PIRSF PIRSF003174 8 163 8.5E-68 T 14-10-2018 IPR010292 Uncharacterised protein family CreA TMO_2006 d2a1c9914f2678f4c4c0d08206c40ff8 521 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site TMO_2006 d2a1c9914f2678f4c4c0d08206c40ff8 521 SMART SM00490 257 338 3.3E-34 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_2006 d2a1c9914f2678f4c4c0d08206c40ff8 521 SMART SM00487 20 220 4.6E-65 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_2006 d2a1c9914f2678f4c4c0d08206c40ff8 521 Gene3D G3DSA:3.40.50.300 212 390 1.2E-51 T 14-10-2018 TMO_2006 d2a1c9914f2678f4c4c0d08206c40ff8 521 Gene3D G3DSA:3.40.50.300 1 208 4.1E-79 T 14-10-2018 TMO_2006 d2a1c9914f2678f4c4c0d08206c40ff8 521 Pfam PF00271 Helicase conserved C-terminal domain 235 338 1.7E-28 T 14-10-2018 IPR001650 Helicase, C-terminal TMO_2006 d2a1c9914f2678f4c4c0d08206c40ff8 521 Pfam PF00270 DEAD/DEAH box helicase 25 193 2.0E-53 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_2006 d2a1c9914f2678f4c4c0d08206c40ff8 521 SUPERFAMILY SSF52540 73 355 1.27E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2728 735c4846c44f400d6961ae1319d64701 283 SMART SM00382 66 246 3.9E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2728 735c4846c44f400d6961ae1319d64701 283 SUPERFAMILY SSF52540 56 247 7.27E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2728 735c4846c44f400d6961ae1319d64701 283 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2728 735c4846c44f400d6961ae1319d64701 283 Gene3D G3DSA:3.40.50.300 36 279 2.0E-65 T 14-10-2018 TMO_2728 735c4846c44f400d6961ae1319d64701 283 Pfam PF00005 ABC transporter 57 197 6.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1079 31f12ad69c2bec9024af83d06ecc312f 160 Gene3D G3DSA:1.20.1290.10 5 131 4.1E-46 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_1079 31f12ad69c2bec9024af83d06ecc312f 160 SUPERFAMILY SSF69118 5 128 2.49E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_1079 31f12ad69c2bec9024af83d06ecc312f 160 Pfam PF02627 Carboxymuconolactone decarboxylase family 44 119 4.7E-17 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_1079 31f12ad69c2bec9024af83d06ecc312f 160 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 60 107 4.4E-16 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_1173 0ba17f80e941b892cbc583dbc177c50b 294 SUPERFAMILY SSF52540 14 268 4.8E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1173 0ba17f80e941b892cbc583dbc177c50b 294 SMART SM00382 16 184 3.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1173 0ba17f80e941b892cbc583dbc177c50b 294 Pfam PF07728 AAA domain (dynein-related subfamily) 19 178 4.5E-11 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TMO_3055 ecd1d04c879170b4caa25077bdd5342f 112 Pfam PF11953 Domain of unknown function (DUF3470) 64 104 4.2E-19 T 14-10-2018 IPR022569 Ferredoxin, C-terminal TMO_3055 ecd1d04c879170b4caa25077bdd5342f 112 SUPERFAMILY SSF54862 3 107 1.75E-23 T 14-10-2018 TMO_3055 ecd1d04c879170b4caa25077bdd5342f 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_3055 ecd1d04c879170b4caa25077bdd5342f 112 Pfam PF00037 4Fe-4S binding domain 34 56 3.5E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_3055 ecd1d04c879170b4caa25077bdd5342f 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 7.5E-19 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 TMO_3055 ecd1d04c879170b4caa25077bdd5342f 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 7.5E-19 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 TMO_3055 ecd1d04c879170b4caa25077bdd5342f 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 7.5E-19 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 TMO_3055 ecd1d04c879170b4caa25077bdd5342f 112 Gene3D G3DSA:3.30.70.20 2 102 1.7E-30 T 14-10-2018 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 Gene3D G3DSA:1.25.40.10 134 216 7.2E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 Pfam PF14561 Tetratricopeptide repeat 216 304 6.9E-31 T 14-10-2018 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 Pfam PF00085 Thioredoxin 20 119 1.8E-25 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 PRINTS PR00421 Thioredoxin family signature 38 46 8.3E-5 T 14-10-2018 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 PRINTS PR00421 Thioredoxin family signature 46 55 8.3E-5 T 14-10-2018 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 PRINTS PR00421 Thioredoxin family signature 86 97 8.3E-5 T 14-10-2018 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 TIGRFAM TIGR01068 thioredoxin: thioredoxin 33 120 6.6E-29 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 SUPERFAMILY SSF52833 16 123 7.96E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 Gene3D G3DSA:1.25.40.10 217 304 5.6E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 ProSitePatterns PS00194 Thioredoxin family active site. 39 57 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 Pfam PF14559 Tetratricopeptide repeat 143 204 1.5E-11 T 14-10-2018 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 Gene3D G3DSA:3.40.30.10 14 123 3.2E-29 T 14-10-2018 TMO_3133 30eb7d46c02c1cb0dd426f8113ac5450 305 SUPERFAMILY SSF48452 137 266 1.21E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0213 c4f0ec5e5e3875728a7f5a1cce720f9d 549 SUPERFAMILY SSF51905 331 547 1.29E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0213 c4f0ec5e5e3875728a7f5a1cce720f9d 549 Gene3D G3DSA:3.50.50.60 16 282 1.9E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0213 c4f0ec5e5e3875728a7f5a1cce720f9d 549 Gene3D G3DSA:3.50.50.60 369 549 6.4E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0213 c4f0ec5e5e3875728a7f5a1cce720f9d 549 SUPERFAMILY SSF51905 19 256 5.77E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0213 c4f0ec5e5e3875728a7f5a1cce720f9d 549 Pfam PF00743 Flavin-binding monooxygenase-like 23 209 1.2E-13 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_3380 66d49d84f3e4f575bf34bc5c90ae3a96 137 SUPERFAMILY SSF47413 3 58 1.45E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_3380 66d49d84f3e4f575bf34bc5c90ae3a96 137 SMART SM00530 7 63 2.6E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_3380 66d49d84f3e4f575bf34bc5c90ae3a96 137 Pfam PF12844 Helix-turn-helix domain 5 58 3.5E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_3380 66d49d84f3e4f575bf34bc5c90ae3a96 137 Gene3D G3DSA:1.10.260.40 2 68 1.1E-15 T 14-10-2018 TMO_3046 5e574ec2a41d487efa476ade88d03bf7 255 SUPERFAMILY SSF102588 29 227 1.7E-38 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 TMO_3046 5e574ec2a41d487efa476ade88d03bf7 255 Pfam PF02585 GlcNAc-PI de-N-acetylase 32 159 1.1E-20 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 TMO_3046 5e574ec2a41d487efa476ade88d03bf7 255 Gene3D G3DSA:3.40.50.10320 26 241 4.7E-37 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 TMO_c0188 a9163aba6e6e8d51fe8a6a442669bba7 266 Pfam PF12833 Helix-turn-helix domain 177 250 1.4E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0188 a9163aba6e6e8d51fe8a6a442669bba7 266 SMART SM00342 171 253 2.9E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_c0188 a9163aba6e6e8d51fe8a6a442669bba7 266 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_c0188 a9163aba6e6e8d51fe8a6a442669bba7 266 SUPERFAMILY SSF51182 12 187 8.09E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0188 a9163aba6e6e8d51fe8a6a442669bba7 266 Gene3D G3DSA:1.10.10.60 155 252 1.3E-21 T 14-10-2018 TMO_c0188 a9163aba6e6e8d51fe8a6a442669bba7 266 Pfam PF02311 AraC-like ligand binding domain 28 88 8.2E-6 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_c0188 a9163aba6e6e8d51fe8a6a442669bba7 266 SUPERFAMILY SSF46689 208 251 2.87E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0188 a9163aba6e6e8d51fe8a6a442669bba7 266 Gene3D G3DSA:2.60.120.10 1 92 6.5E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_0669 93ba631554a307d0d0e6f41146566178 841 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 780 797 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site TMO_0669 93ba631554a307d0d0e6f41146566178 841 SUPERFAMILY SSF51206 711 829 1.44E-32 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like TMO_0669 93ba631554a307d0d0e6f41146566178 841 SMART SM00100 718 830 3.5E-25 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_0669 93ba631554a307d0d0e6f41146566178 841 PRINTS PR00103 cAMP-dependent protein kinase signature 754 768 2.0E-7 T 14-10-2018 TMO_0669 93ba631554a307d0d0e6f41146566178 841 PRINTS PR00103 cAMP-dependent protein kinase signature 739 753 2.0E-7 T 14-10-2018 TMO_0669 93ba631554a307d0d0e6f41146566178 841 PRINTS PR00103 cAMP-dependent protein kinase signature 778 787 2.0E-7 T 14-10-2018 TMO_0669 93ba631554a307d0d0e6f41146566178 841 PRINTS PR00103 cAMP-dependent protein kinase signature 790 801 2.0E-7 T 14-10-2018 TMO_0669 93ba631554a307d0d0e6f41146566178 841 PRINTS PR00103 cAMP-dependent protein kinase signature 811 823 2.0E-7 T 14-10-2018 TMO_0669 93ba631554a307d0d0e6f41146566178 841 Gene3D G3DSA:2.60.120.10 708 839 3.1E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_0669 93ba631554a307d0d0e6f41146566178 841 Pfam PF00999 Sodium/hydrogen exchanger family 14 428 7.6E-49 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TMO_0669 93ba631554a307d0d0e6f41146566178 841 Pfam PF00027 Cyclic nucleotide-binding domain 740 818 7.9E-21 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 Gene3D G3DSA:3.40.50.720 234 370 1.9E-34 T 14-10-2018 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 Gene3D G3DSA:3.30.70.1450 371 458 5.7E-24 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 9.5E-26 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 9.5E-26 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 9.5E-26 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 9.5E-26 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 9.5E-26 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 SUPERFAMILY SSF51735 1 152 1.77E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 Pfam PF02080 TrkA-C domain 157 227 3.8E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 Pfam PF02080 TrkA-C domain 387 451 3.7E-16 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 Pfam PF02254 TrkA-N domain 3 126 1.5E-27 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 Pfam PF02254 TrkA-N domain 236 354 1.1E-20 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 SUPERFAMILY SSF116726 365 451 1.83E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 SUPERFAMILY SSF116726 137 227 1.22E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 SUPERFAMILY SSF51735 234 380 1.92E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 Gene3D G3DSA:3.40.50.720 2 140 1.0E-44 T 14-10-2018 TMO_1701 b34f8cada73f2234fdb407492fcb9a07 458 Gene3D G3DSA:3.30.70.1450 141 232 2.2E-18 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TMO_2457 85ce628a1b80b096d19d9442a256d256 119 Gene3D G3DSA:3.40.50.1010 1 109 9.3E-11 T 14-10-2018 TMO_2457 85ce628a1b80b096d19d9442a256d256 119 SUPERFAMILY SSF88723 12 117 1.71E-12 T 14-10-2018 IPR029060 PIN-like domain superfamily TMO_2457 85ce628a1b80b096d19d9442a256d256 119 Pfam PF01850 PIN domain 5 109 2.5E-10 T 14-10-2018 IPR002716 PIN domain TMO_3276 ceb50915fe585989ae0c145204150079 257 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 31 250 3.6E-85 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3276 ceb50915fe585989ae0c145204150079 257 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 79 87 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TMO_3276 ceb50915fe585989ae0c145204150079 257 Gene3D G3DSA:1.10.1060.10 128 257 7.6E-59 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_3276 ceb50915fe585989ae0c145204150079 257 SUPERFAMILY SSF46548 128 256 1.66E-37 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_3276 ceb50915fe585989ae0c145204150079 257 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 132 8.9E-33 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3276 ceb50915fe585989ae0c145204150079 257 SUPERFAMILY SSF54292 27 127 8.49E-32 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_3276 ceb50915fe585989ae0c145204150079 257 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 169 180 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_3276 ceb50915fe585989ae0c145204150079 257 Pfam PF13534 4Fe-4S dicluster domain 168 241 2.6E-9 T 14-10-2018 TMO_3276 ceb50915fe585989ae0c145204150079 257 Gene3D G3DSA:3.10.20.30 17 127 4.9E-45 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_1938 b8421c5018b275e7cb63df044fbf25b0 306 Pfam PF01497 Periplasmic binding protein 24 251 1.0E-9 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain TMO_1938 b8421c5018b275e7cb63df044fbf25b0 306 Gene3D G3DSA:3.40.50.1980 12 139 4.9E-15 T 14-10-2018 TMO_1938 b8421c5018b275e7cb63df044fbf25b0 306 Gene3D G3DSA:3.40.50.1980 146 284 1.4E-5 T 14-10-2018 TMO_1938 b8421c5018b275e7cb63df044fbf25b0 306 SUPERFAMILY SSF53807 20 251 1.57E-24 T 14-10-2018 TMO_2132 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 Pfam PF00005 ABC transporter 23 178 5.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2132 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 SMART SM00382 31 225 4.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2132 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 247 7.1E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_2132 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 SUPERFAMILY SSF52540 5 247 3.52E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2132 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 Gene3D G3DSA:3.40.50.300 2 248 1.5E-60 T 14-10-2018 TMO_1457 f97482691ddd692a4e0eade2a46c72fa 255 SUPERFAMILY SSF51182 21 179 2.47E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_1457 f97482691ddd692a4e0eade2a46c72fa 255 Gene3D G3DSA:1.10.10.60 156 255 5.9E-18 T 14-10-2018 TMO_1457 f97482691ddd692a4e0eade2a46c72fa 255 Pfam PF02311 AraC-like ligand binding domain 30 111 1.3E-4 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_1457 f97482691ddd692a4e0eade2a46c72fa 255 Pfam PF12833 Helix-turn-helix domain 176 251 4.2E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_1457 f97482691ddd692a4e0eade2a46c72fa 255 Gene3D G3DSA:2.60.120.10 14 104 1.9E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_1457 f97482691ddd692a4e0eade2a46c72fa 255 SMART SM00342 170 252 2.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_1893 8e660a2a093d38103fcf164b18aa3116 97 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 5 93 6.1E-28 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 TMO_1893 8e660a2a093d38103fcf164b18aa3116 97 Gene3D G3DSA:3.30.310.50 1 95 4.9E-27 T 14-10-2018 TMO_1893 8e660a2a093d38103fcf164b18aa3116 97 PIRSF PIRSF028291 1 96 3.0E-25 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 TMO_a0534 0271de984f4d715016f08bbb6a3f8d8e 744 Gene3D G3DSA:3.30.565.10 597 735 2.0E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0534 0271de984f4d715016f08bbb6a3f8d8e 744 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 637 736 7.0E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0534 0271de984f4d715016f08bbb6a3f8d8e 744 SMART SM00387 632 737 8.3E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0534 0271de984f4d715016f08bbb6a3f8d8e 744 SUPERFAMILY SSF55874 593 735 5.89E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2320 e829b713069566b5ceb4fcb9f552328b 142 Gene3D G3DSA:3.30.2000.20 8 138 3.6E-17 T 14-10-2018 TMO_2320 e829b713069566b5ceb4fcb9f552328b 142 Pfam PF13554 Bacteriophage related domain of unknown function 12 111 1.2E-11 T 14-10-2018 IPR025395 Protein of unknown function DUF4128 TMO_3262 5042b11ec9ccf7d42a1fed7422ab4793 266 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_3262 5042b11ec9ccf7d42a1fed7422ab4793 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 250 3.1E-46 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_3262 5042b11ec9ccf7d42a1fed7422ab4793 266 Gene3D G3DSA:3.90.226.10 4 257 6.7E-62 T 14-10-2018 TMO_3262 5042b11ec9ccf7d42a1fed7422ab4793 266 SUPERFAMILY SSF52096 4 256 4.54E-64 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_0417 c132b92cf81a6022d7a93373352f85e0 824 Hamap MF_01871 UPF0753 protein . 6 792 22.531 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 TMO_0417 c132b92cf81a6022d7a93373352f85e0 824 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 11 777 4.7E-242 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 TMO_0267 06d6ca04f76fd38ad8f1478b30927ff2 148 Pfam PF01047 MarR family 31 87 4.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0267 06d6ca04f76fd38ad8f1478b30927ff2 148 SUPERFAMILY SSF46785 4 135 1.26E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0267 06d6ca04f76fd38ad8f1478b30927ff2 148 Gene3D G3DSA:1.10.10.10 3 137 2.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0267 06d6ca04f76fd38ad8f1478b30927ff2 148 SMART SM00347 24 124 1.9E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0134 187190c8fb117b30c59d0fdf7cc7fb6c 202 Gene3D G3DSA:1.10.1740.10 15 106 1.5E-24 T 14-10-2018 TMO_c0134 187190c8fb117b30c59d0fdf7cc7fb6c 202 Gene3D G3DSA:1.10.10.10 115 191 6.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0134 187190c8fb117b30c59d0fdf7cc7fb6c 202 Pfam PF04542 Sigma-70 region 2 38 104 6.5E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_c0134 187190c8fb117b30c59d0fdf7cc7fb6c 202 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 188 1.4E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_c0134 187190c8fb117b30c59d0fdf7cc7fb6c 202 SUPERFAMILY SSF88659 116 192 1.31E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_c0134 187190c8fb117b30c59d0fdf7cc7fb6c 202 SUPERFAMILY SSF88946 17 110 5.65E-25 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_c0134 187190c8fb117b30c59d0fdf7cc7fb6c 202 Pfam PF08281 Sigma-70, region 4 134 186 5.1E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_c0696 6fdded9cf0ced80a2e53c2fa5f2899f3 755 SUPERFAMILY SSF102114 187 396 8.11E-31 T 14-10-2018 TMO_c0696 6fdded9cf0ced80a2e53c2fa5f2899f3 755 Gene3D G3DSA:3.80.30.20 192 391 1.7E-17 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TMO_c0696 6fdded9cf0ced80a2e53c2fa5f2899f3 755 SUPERFAMILY SSF52242 47 147 1.33E-7 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TMO_c0696 6fdded9cf0ced80a2e53c2fa5f2899f3 755 SMART SM00729 193 409 1.1E-17 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_c0696 6fdded9cf0ced80a2e53c2fa5f2899f3 755 Pfam PF04055 Radical SAM superfamily 198 359 2.9E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_c0696 6fdded9cf0ced80a2e53c2fa5f2899f3 755 Pfam PF02310 B12 binding domain 19 132 4.1E-14 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TMO_c0696 6fdded9cf0ced80a2e53c2fa5f2899f3 755 Gene3D G3DSA:3.40.50.280 40 140 8.9E-6 T 14-10-2018 TMO_0131 abe3de27d29fb00244eb8bea980152e7 254 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0131 abe3de27d29fb00244eb8bea980152e7 254 SUPERFAMILY SSF52540 7 225 1.05E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0131 abe3de27d29fb00244eb8bea980152e7 254 SMART SM00382 33 220 5.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0131 abe3de27d29fb00244eb8bea980152e7 254 Gene3D G3DSA:3.40.50.300 5 247 2.8E-62 T 14-10-2018 TMO_0131 abe3de27d29fb00244eb8bea980152e7 254 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 7 220 7.2E-81 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 TMO_0131 abe3de27d29fb00244eb8bea980152e7 254 Pfam PF00005 ABC transporter 24 171 1.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0405 c0f72f698445243805a53f843c47fb59 237 SMART SM00382 29 213 3.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0405 c0f72f698445243805a53f843c47fb59 237 SUPERFAMILY SSF52540 4 222 2.19E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0405 c0f72f698445243805a53f843c47fb59 237 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0405 c0f72f698445243805a53f843c47fb59 237 Pfam PF00005 ABC transporter 21 163 1.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0405 c0f72f698445243805a53f843c47fb59 237 Gene3D G3DSA:3.40.50.300 1 236 1.7E-61 T 14-10-2018 TMO_1166 bf8b420c3ae0efbb716dcd6b3c007e31 340 Gene3D G3DSA:3.90.25.10 190 311 9.7E-100 T 14-10-2018 TMO_1166 bf8b420c3ae0efbb716dcd6b3c007e31 340 Gene3D G3DSA:3.40.50.720 3 303 9.7E-100 T 14-10-2018 TMO_1166 bf8b420c3ae0efbb716dcd6b3c007e31 340 SUPERFAMILY SSF51735 1 315 5.91E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1166 bf8b420c3ae0efbb716dcd6b3c007e31 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 297 9.4E-62 T 14-10-2018 IPR016040 NAD(P)-binding domain TMO_2873 744e90ab3adae6cba17b890a50b3828e 547 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 32 374 1.0E-117 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 TMO_2873 744e90ab3adae6cba17b890a50b3828e 547 Pfam PF02601 Exonuclease VII, large subunit 147 512 1.2E-87 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 TMO_2873 744e90ab3adae6cba17b890a50b3828e 547 Pfam PF13742 OB-fold nucleic acid binding domain 31 124 6.5E-28 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 TMO_2873 744e90ab3adae6cba17b890a50b3828e 547 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 28 515 27.557 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 TMO_2879 657cfb52f1d8d82dc62edda5bf9846e1 588 SMART SM00363 14 71 1.2E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2879 657cfb52f1d8d82dc62edda5bf9846e1 588 Gene3D G3DSA:3.30.70.1560 136 225 2.5E-51 T 14-10-2018 TMO_2879 657cfb52f1d8d82dc62edda5bf9846e1 588 Gene3D G3DSA:3.10.290.10 11 68 6.4E-18 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TMO_2879 657cfb52f1d8d82dc62edda5bf9846e1 588 Gene3D G3DSA:3.30.70.580 77 233 2.5E-51 T 14-10-2018 TMO_2879 657cfb52f1d8d82dc62edda5bf9846e1 588 SUPERFAMILY SSF55120 74 237 8.06E-41 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_2879 657cfb52f1d8d82dc62edda5bf9846e1 588 Pfam PF00849 RNA pseudouridylate synthase 75 205 4.1E-13 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_2879 657cfb52f1d8d82dc62edda5bf9846e1 588 SUPERFAMILY SSF55174 14 78 2.35E-13 T 14-10-2018 TMO_2879 657cfb52f1d8d82dc62edda5bf9846e1 588 Pfam PF01479 S4 domain 15 60 6.4E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_2879 657cfb52f1d8d82dc62edda5bf9846e1 588 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 112 126 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 TMO_2879 657cfb52f1d8d82dc62edda5bf9846e1 588 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 79 236 1.0E-44 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 SUPERFAMILY SSF51735 7 250 5.86E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.9E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.9E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.9E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 Gene3D G3DSA:3.40.50.720 5 281 1.1E-79 T 14-10-2018 TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.3E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.3E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.3E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.3E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2539 1f21194b66597ec71226d39cd90a56e4 282 Pfam PF00106 short chain dehydrogenase 7 192 2.8E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0879 662d5a5410bb7d7849812aac1e3d1bd1 201 SMART SM00530 75 130 1.8E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0879 662d5a5410bb7d7849812aac1e3d1bd1 201 SUPERFAMILY SSF47413 61 137 2.15E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_c0879 662d5a5410bb7d7849812aac1e3d1bd1 201 Pfam PF12844 Helix-turn-helix domain 73 135 4.3E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0879 662d5a5410bb7d7849812aac1e3d1bd1 201 Gene3D G3DSA:1.10.260.40 64 136 8.5E-18 T 14-10-2018 TMO_0792 badee096994058abf78b9b77daf27137 232 Gene3D G3DSA:3.40.50.880 1 230 2.2E-72 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_0792 badee096994058abf78b9b77daf27137 232 Pfam PF01965 DJ-1/PfpI family 9 166 2.3E-23 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_0792 badee096994058abf78b9b77daf27137 232 SUPERFAMILY SSF52317 6 186 4.19E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_0412 b160f2211bf4fc52a8902c2464422f9c 341 Pfam PF00248 Aldo/keto reductase family 16 316 4.9E-66 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_0412 b160f2211bf4fc52a8902c2464422f9c 341 SUPERFAMILY SSF51430 1 316 7.6E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_0412 b160f2211bf4fc52a8902c2464422f9c 341 Gene3D G3DSA:3.20.20.100 1 339 1.4E-125 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_2571 1b703b6dbefffc2155dffda2bcbd82ac 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 142 162 3.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2571 1b703b6dbefffc2155dffda2bcbd82ac 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 128 3.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2571 1b703b6dbefffc2155dffda2bcbd82ac 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 108 3.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2571 1b703b6dbefffc2155dffda2bcbd82ac 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 92 3.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2571 1b703b6dbefffc2155dffda2bcbd82ac 189 Gene3D G3DSA:1.10.10.10 15 169 1.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2571 1b703b6dbefffc2155dffda2bcbd82ac 189 SUPERFAMILY SSF46785 30 169 1.17E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2571 1b703b6dbefffc2155dffda2bcbd82ac 189 Pfam PF01047 MarR family 60 116 1.1E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2571 1b703b6dbefffc2155dffda2bcbd82ac 189 SMART SM00347 52 152 1.7E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1295 4e80676736c647a517d2d3617e58e280 498 Gene3D G3DSA:3.30.420.40 241 496 3.7E-60 T 14-10-2018 TMO_1295 4e80676736c647a517d2d3617e58e280 498 SUPERFAMILY SSF53067 253 485 5.06E-50 T 14-10-2018 TMO_1295 4e80676736c647a517d2d3617e58e280 498 PIRSF PIRSF000538 1 495 1.2E-95 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TMO_1295 4e80676736c647a517d2d3617e58e280 498 Gene3D G3DSA:3.30.420.40 1 239 1.8E-61 T 14-10-2018 TMO_1295 4e80676736c647a517d2d3617e58e280 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 248 9.5E-51 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TMO_1295 4e80676736c647a517d2d3617e58e280 498 SUPERFAMILY SSF53067 3 251 1.73E-50 T 14-10-2018 TMO_1295 4e80676736c647a517d2d3617e58e280 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 444 4.9E-27 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TMO_1295 4e80676736c647a517d2d3617e58e280 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 357 377 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TMO_0382 ba527c290b36e6f39fe229f7087705a1 389 Pfam PF13763 Domain of unknown function (DUF4167) 17 80 2.1E-24 T 14-10-2018 IPR025430 Domain of unknown function DUF4167 TMO_3203 4a98dd908a67b59808cc65382944c55a 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 7.0E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3203 4a98dd908a67b59808cc65382944c55a 307 SUPERFAMILY SSF46785 5 107 8.77E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3203 4a98dd908a67b59808cc65382944c55a 307 SUPERFAMILY SSF53850 95 303 4.45E-36 T 14-10-2018 TMO_3203 4a98dd908a67b59808cc65382944c55a 307 Gene3D G3DSA:3.40.190.290 95 305 4.4E-37 T 14-10-2018 TMO_3203 4a98dd908a67b59808cc65382944c55a 307 Pfam PF03466 LysR substrate binding domain 93 301 6.2E-36 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_3203 4a98dd908a67b59808cc65382944c55a 307 Gene3D G3DSA:1.10.10.10 6 90 4.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0425 67d9e2ec804f4da80867bfb883bcd1f6 317 PIRSF PIRSF000105 1 267 6.9E-59 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 TMO_b0425 67d9e2ec804f4da80867bfb883bcd1f6 317 SUPERFAMILY SSF48179 181 254 5.53E-10 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_b0425 67d9e2ec804f4da80867bfb883bcd1f6 317 Gene3D G3DSA:3.40.50.720 1 181 4.4E-43 T 14-10-2018 TMO_b0425 67d9e2ec804f4da80867bfb883bcd1f6 317 Gene3D G3DSA:1.10.1040.10 182 305 2.1E-28 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_b0425 67d9e2ec804f4da80867bfb883bcd1f6 317 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 4 174 2.5E-35 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_b0425 67d9e2ec804f4da80867bfb883bcd1f6 317 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 181 247 3.2E-9 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_b0425 67d9e2ec804f4da80867bfb883bcd1f6 317 SUPERFAMILY SSF51735 2 175 1.32E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0321 31b470aef44c38727bf64eb85b98889a 253 PIRSF PIRSF029730 5 252 4.1E-80 T 14-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 TMO_c0321 31b470aef44c38727bf64eb85b98889a 253 Pfam PF05013 N-formylglutamate amidohydrolase 22 228 7.4E-43 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase TMO_c0321 31b470aef44c38727bf64eb85b98889a 253 SUPERFAMILY SSF53187 12 252 1.13E-66 T 14-10-2018 TMO_c0321 31b470aef44c38727bf64eb85b98889a 253 Gene3D G3DSA:3.40.630.40 13 253 2.1E-76 T 14-10-2018 TMO_1259 5bb7337a490f1da0feaa831db02caed8 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 4.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_1259 5bb7337a490f1da0feaa831db02caed8 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 4.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_1259 5bb7337a490f1da0feaa831db02caed8 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_1259 5bb7337a490f1da0feaa831db02caed8 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_1259 5bb7337a490f1da0feaa831db02caed8 113 SUPERFAMILY SSF46785 6 96 1.22E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1259 5bb7337a490f1da0feaa831db02caed8 113 Pfam PF01022 Bacterial regulatory protein, arsR family 22 66 1.6E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_1259 5bb7337a490f1da0feaa831db02caed8 113 SMART SM00418 15 93 6.2E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_1259 5bb7337a490f1da0feaa831db02caed8 113 Gene3D G3DSA:1.10.10.10 1 101 5.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2512 279b61d2bb73ec2dae63e56e038d3fc3 367 Gene3D G3DSA:1.10.3720.10 151 365 1.1E-49 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2512 279b61d2bb73ec2dae63e56e038d3fc3 367 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 253 1.0E-18 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_2512 279b61d2bb73ec2dae63e56e038d3fc3 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 175 359 3.0E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2512 279b61d2bb73ec2dae63e56e038d3fc3 367 SUPERFAMILY SSF161098 155 347 1.96E-40 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0189 a2d429986e330aa9203c43774fb2992a 203 SUPERFAMILY SSF50475 12 143 1.37E-13 T 14-10-2018 TMO_c0189 a2d429986e330aa9203c43774fb2992a 203 Gene3D G3DSA:2.30.110.10 32 155 1.4E-17 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_c0189 a2d429986e330aa9203c43774fb2992a 203 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 119 2.5E-9 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_c0189 a2d429986e330aa9203c43774fb2992a 203 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 203 1.8E-60 T 14-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent TMO_c0574 1ae9677dda86827631814ef34065714b 317 SUPERFAMILY SSF53474 55 314 2.08E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0574 1ae9677dda86827631814ef34065714b 317 Gene3D G3DSA:3.40.50.1820 1 317 1.7E-84 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0472 6346418c7423b76dc1e93ee03b5dccb7 60 Pfam PF05532 CsbD-like 4 56 1.2E-20 T 14-10-2018 IPR008462 CsbD-like domain TMO_a0472 6346418c7423b76dc1e93ee03b5dccb7 60 SUPERFAMILY SSF69047 1 59 5.62E-18 T 14-10-2018 IPR036629 YjbJ superfamily TMO_a0472 6346418c7423b76dc1e93ee03b5dccb7 60 Gene3D G3DSA:1.10.1470.10 1 60 4.7E-18 T 14-10-2018 IPR036629 YjbJ superfamily TMO_2789 388efada9b07bc261c98da933aa2c9b8 125 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 121 3.9E-46 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 TMO_2789 388efada9b07bc261c98da933aa2c9b8 125 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 44 73 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TMO_2789 388efada9b07bc261c98da933aa2c9b8 125 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 122 40.581 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 TMO_2789 388efada9b07bc261c98da933aa2c9b8 125 Pfam PF01597 Glycine cleavage H-protein 4 122 1.1E-44 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate TMO_2789 388efada9b07bc261c98da933aa2c9b8 125 Gene3D G3DSA:2.40.50.100 1 123 9.3E-50 T 14-10-2018 TMO_2789 388efada9b07bc261c98da933aa2c9b8 125 SUPERFAMILY SSF51230 2 122 3.66E-46 T 14-10-2018 IPR011053 Single hybrid motif TMO_3135 694796ca5e767505251554fa68fe0298 70 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 12 65 27.556 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 TMO_3135 694796ca5e767505251554fa68fe0298 70 Gene3D G3DSA:2.20.25.10 19 69 6.7E-24 T 14-10-2018 TMO_3135 694796ca5e767505251554fa68fe0298 70 Pfam PF03966 Trm112p-like protein 13 52 4.1E-9 T 14-10-2018 IPR005651 Trm112-like TMO_3135 694796ca5e767505251554fa68fe0298 70 SUPERFAMILY SSF158997 12 66 6.15E-21 T 14-10-2018 TMO_1089 1774fbe1dec453e14afabdce36d35963 173 Pfam PF05130 FlgN protein 28 129 7.5E-7 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 TMO_1089 1774fbe1dec453e14afabdce36d35963 173 SUPERFAMILY SSF140566 35 128 1.44E-6 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 TMO_0370 e79d60f3d4e995e761de07fce01adfb9 224 SUPERFAMILY SSF52172 1 176 2.28E-37 T 14-10-2018 IPR011006 CheY-like superfamily TMO_0370 e79d60f3d4e995e761de07fce01adfb9 224 SMART SM00448 1 112 5.9E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0370 e79d60f3d4e995e761de07fce01adfb9 224 Pfam PF00072 Response regulator receiver domain 3 112 1.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0370 e79d60f3d4e995e761de07fce01adfb9 224 Gene3D G3DSA:1.10.10.10 123 224 6.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0370 e79d60f3d4e995e761de07fce01adfb9 224 SMART SM00862 145 218 1.5E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_0370 e79d60f3d4e995e761de07fce01adfb9 224 Gene3D G3DSA:3.40.50.2300 1 122 5.7E-36 T 14-10-2018 TMO_0370 e79d60f3d4e995e761de07fce01adfb9 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 3.4E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_b0541 ec4815183cfe0d88bf4e3f1f684874af 99 Gene3D G3DSA:3.30.2270.10 1 99 3.5E-34 T 14-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 TMO_b0541 ec4815183cfe0d88bf4e3f1f684874af 99 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 3 85 2.8E-37 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 TMO_b0541 ec4815183cfe0d88bf4e3f1f684874af 99 Pfam PF04267 Sarcosine oxidase, delta subunit family 3 83 9.3E-33 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 TMO_0763 456c69378010ab60ed1b4c198a843a4e 171 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 19 158 1.8E-12 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TMO_0763 456c69378010ab60ed1b4c198a843a4e 171 Pfam PF04093 rod shape-determining protein MreD 17 129 3.9E-10 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TMO_0380 8842331b5d898d53d3fc97991a102364 362 Gene3D G3DSA:3.30.70.1660 108 214 4.8E-46 T 14-10-2018 TMO_0380 8842331b5d898d53d3fc97991a102364 362 Gene3D G3DSA:3.30.70.1660 288 362 2.5E-15 T 14-10-2018 TMO_0380 8842331b5d898d53d3fc97991a102364 362 Pfam PF03462 PCRF domain 12 204 1.2E-66 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 TMO_0380 8842331b5d898d53d3fc97991a102364 362 Gene3D G3DSA:3.30.160.20 215 287 4.2E-36 T 14-10-2018 TMO_0380 8842331b5d898d53d3fc97991a102364 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 358 39.258 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TMO_0380 8842331b5d898d53d3fc97991a102364 362 Pfam PF00472 RF-1 domain 212 321 2.2E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TMO_0380 8842331b5d898d53d3fc97991a102364 362 SMART SM00937 64 179 4.8E-52 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 TMO_0380 8842331b5d898d53d3fc97991a102364 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TMO_0380 8842331b5d898d53d3fc97991a102364 362 SUPERFAMILY SSF75620 11 354 6.8E-124 T 14-10-2018 TMO_0380 8842331b5d898d53d3fc97991a102364 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 1.9E-151 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TMO_a0129 8d6cade7d20bb99effcfe7fbd3302bdf 298 Gene3D G3DSA:1.10.3720.10 85 298 5.7E-16 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0129 8d6cade7d20bb99effcfe7fbd3302bdf 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 298 2.0E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_a0129 8d6cade7d20bb99effcfe7fbd3302bdf 298 SUPERFAMILY SSF161098 92 281 9.03E-22 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0788 2b9758cfb0c8737ab11a4187baa59cc5 136 SUPERFAMILY SSF47413 60 118 8.09E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0788 2b9758cfb0c8737ab11a4187baa59cc5 136 Gene3D G3DSA:1.10.260.40 53 122 8.4E-6 T 14-10-2018 TMO_0788 2b9758cfb0c8737ab11a4187baa59cc5 136 SMART SM00530 62 116 0.0016 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0465 98e0d7a83a2597379afa0d10b22d9c81 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 6.7E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0465 98e0d7a83a2597379afa0d10b22d9c81 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 6.7E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0465 98e0d7a83a2597379afa0d10b22d9c81 227 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 69 1.9E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0465 98e0d7a83a2597379afa0d10b22d9c81 227 Pfam PF07729 FCD domain 92 214 3.2E-26 T 14-10-2018 IPR011711 GntR, C-terminal TMO_c0465 98e0d7a83a2597379afa0d10b22d9c81 227 SUPERFAMILY SSF46785 6 73 1.57E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0465 98e0d7a83a2597379afa0d10b22d9c81 227 SMART SM00345 10 69 3.1E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0465 98e0d7a83a2597379afa0d10b22d9c81 227 SUPERFAMILY SSF48008 91 218 6.54E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_c0465 98e0d7a83a2597379afa0d10b22d9c81 227 Gene3D G3DSA:1.20.120.530 88 219 3.6E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_c0465 98e0d7a83a2597379afa0d10b22d9c81 227 SMART SM00895 91 215 1.1E-19 T 14-10-2018 IPR011711 GntR, C-terminal TMO_c0465 98e0d7a83a2597379afa0d10b22d9c81 227 Gene3D G3DSA:1.10.10.10 3 73 3.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3040 4985364dca304f751507668103b479bf 352 SUPERFAMILY SSF51735 1 326 1.78E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3040 4985364dca304f751507668103b479bf 352 Gene3D G3DSA:3.40.50.720 1 307 2.1E-43 T 14-10-2018 TMO_3040 4985364dca304f751507668103b479bf 352 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 236 2.3E-30 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TMO_0503 39211f20c8ef810b7aa6d19cc7483212 217 PIRSF PIRSF033239 8 213 1.3E-64 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD TMO_0503 39211f20c8ef810b7aa6d19cc7483212 217 Pfam PF06055 Exopolysaccharide synthesis, ExoD 21 198 4.6E-59 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD TMO_b0197 5461e1bd5aad751d0ba646cf14ef494a 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 2.7E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0197 5461e1bd5aad751d0ba646cf14ef494a 201 SUPERFAMILY SSF46689 8 86 2.21E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0197 5461e1bd5aad751d0ba646cf14ef494a 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0197 5461e1bd5aad751d0ba646cf14ef494a 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0197 5461e1bd5aad751d0ba646cf14ef494a 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 64 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_b0197 5461e1bd5aad751d0ba646cf14ef494a 201 Gene3D G3DSA:1.10.357.10 10 201 3.2E-32 T 14-10-2018 TMO_b0197 5461e1bd5aad751d0ba646cf14ef494a 201 SUPERFAMILY SSF48498 112 196 3.29E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_2551 3b57df53c65483a28f828cddb0dd053c 381 SUPERFAMILY SSF102405 86 295 3.2E-35 T 14-10-2018 TMO_2551 3b57df53c65483a28f828cddb0dd053c 381 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 77 293 7.9E-61 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TMO_2551 3b57df53c65483a28f828cddb0dd053c 381 Pfam PF02481 DNA recombination-mediator protein A 76 285 7.5E-67 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TMO_2551 3b57df53c65483a28f828cddb0dd053c 381 Gene3D G3DSA:1.10.10.10 299 379 2.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2551 3b57df53c65483a28f828cddb0dd053c 381 Gene3D G3DSA:3.40.50.450 2 298 2.4E-102 T 14-10-2018 TMO_1026 a7e2ece5ecad53ae151eb0e52f82de56 510 Pfam PF00171 Aldehyde dehydrogenase family 35 494 3.0E-156 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_1026 a7e2ece5ecad53ae151eb0e52f82de56 510 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_1026 a7e2ece5ecad53ae151eb0e52f82de56 510 SUPERFAMILY SSF53720 17 497 1.57E-150 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_1026 a7e2ece5ecad53ae151eb0e52f82de56 510 Gene3D G3DSA:3.40.605.10 34 493 3.2E-163 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_1026 a7e2ece5ecad53ae151eb0e52f82de56 510 Gene3D G3DSA:3.40.309.10 270 462 3.2E-163 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_3532 0107f874e91e986325a81d58c63aab99 380 SUPERFAMILY SSF52540 149 328 1.17E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3532 0107f874e91e986325a81d58c63aab99 380 Pfam PF02562 PhoH-like protein 150 353 8.5E-91 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 TMO_3532 0107f874e91e986325a81d58c63aab99 380 Gene3D G3DSA:3.40.50.300 146 353 2.2E-73 T 14-10-2018 TMO_a0337 f76504d0d760f0758164dd567555b8dd 225 Gene3D G3DSA:1.10.10.10 9 125 3.5E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0337 f76504d0d760f0758164dd567555b8dd 225 SUPERFAMILY SSF46785 17 198 8.86E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2277 636af89e6055fe0117c7a4f11a5d20ae 319 Gene3D G3DSA:3.40.190.150 27 304 1.3E-84 T 14-10-2018 TMO_2277 636af89e6055fe0117c7a4f11a5d20ae 319 Gene3D G3DSA:3.40.190.10 123 245 1.3E-84 T 14-10-2018 TMO_2277 636af89e6055fe0117c7a4f11a5d20ae 319 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 301 7.5E-52 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 TMO_2277 636af89e6055fe0117c7a4f11a5d20ae 319 SUPERFAMILY SSF53850 106 282 2.1E-12 T 14-10-2018 TMO_2277 636af89e6055fe0117c7a4f11a5d20ae 319 PIRSF PIRSF017082 1 317 2.8E-90 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 TMO_1222 9e14bba1f0d032bb5a24335f2d0ccd01 222 Gene3D G3DSA:3.30.565.10 62 190 5.1E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1222 9e14bba1f0d032bb5a24335f2d0ccd01 222 Gene3D G3DSA:1.10.287.130 1 60 9.7E-22 T 14-10-2018 TMO_1222 9e14bba1f0d032bb5a24335f2d0ccd01 222 Pfam PF10090 Histidine phosphotransferase C-terminal domain 67 187 3.8E-18 T 14-10-2018 IPR018762 Histidine phosphotransferase ChpT, C-terminal TMO_2020 2e667c203e1e424be08c75402849f186 205 Gene3D G3DSA:3.40.50.1240 13 199 2.7E-42 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_2020 2e667c203e1e424be08c75402849f186 205 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 14 175 1.6E-40 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_2020 2e667c203e1e424be08c75402849f186 205 SMART SM00855 13 162 1.7E-20 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_2020 2e667c203e1e424be08c75402849f186 205 PIRSF PIRSF000709 12 171 9.7E-14 T 14-10-2018 TMO_2020 2e667c203e1e424be08c75402849f186 205 SUPERFAMILY SSF53254 14 195 1.69E-40 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 197 5.7E-4 T 14-10-2018 TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 Gene3D G3DSA:3.40.50.720 1 256 2.5E-75 T 14-10-2018 TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 SUPERFAMILY SSF51735 6 256 1.99E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 253 8.9E-54 T 14-10-2018 TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2840 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 4.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2005 dc03e0d047cc6ec6752f2525c81325ab 197 SUPERFAMILY SSF52499 19 197 6.41E-48 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_2005 dc03e0d047cc6ec6752f2525c81325ab 197 Pfam PF00857 Isochorismatase family 26 174 1.3E-32 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_2005 dc03e0d047cc6ec6752f2525c81325ab 197 Gene3D G3DSA:3.40.50.850 11 197 5.5E-54 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_2428 89685fa89c7c19f47388332af9324cf4 906 SUPERFAMILY SSF158745 565 888 9.94E-44 T 14-10-2018 TMO_2428 89685fa89c7c19f47388332af9324cf4 906 Gene3D G3DSA:1.50.10.10 566 902 7.9E-25 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TMO_2428 89685fa89c7c19f47388332af9324cf4 906 Pfam PF05147 Lanthionine synthetase C-like protein 570 853 3.3E-36 T 14-10-2018 IPR007822 Lanthionine synthetase C-like TMO_2428 89685fa89c7c19f47388332af9324cf4 906 PRINTS PR01950 LanC-like protein superfamily signature 671 686 4.2E-10 T 14-10-2018 IPR007822 Lanthionine synthetase C-like TMO_2428 89685fa89c7c19f47388332af9324cf4 906 PRINTS PR01950 LanC-like protein superfamily signature 728 744 4.2E-10 T 14-10-2018 IPR007822 Lanthionine synthetase C-like TMO_2428 89685fa89c7c19f47388332af9324cf4 906 PRINTS PR01950 LanC-like protein superfamily signature 786 806 4.2E-10 T 14-10-2018 IPR007822 Lanthionine synthetase C-like TMO_2428 89685fa89c7c19f47388332af9324cf4 906 PRINTS PR01950 LanC-like protein superfamily signature 569 587 4.2E-10 T 14-10-2018 IPR007822 Lanthionine synthetase C-like TMO_2428 89685fa89c7c19f47388332af9324cf4 906 SMART SM01260 566 903 3.5E-47 T 14-10-2018 IPR007822 Lanthionine synthetase C-like TMO_2428 89685fa89c7c19f47388332af9324cf4 906 Pfam PF13575 Domain of unknown function (DUF4135) 102 474 3.8E-79 T 14-10-2018 IPR025410 Lantibiotic biosynthesis protein, dehydration domain TMO_1826 44fa73dee432df4b34a580211f069cf2 147 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 9 146 8.7E-51 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TMO_1826 44fa73dee432df4b34a580211f069cf2 147 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 9 146 9.3E-49 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 TMO_1826 44fa73dee432df4b34a580211f069cf2 147 Pfam PF02502 Ribose/Galactose Isomerase 9 146 7.6E-54 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TMO_1826 44fa73dee432df4b34a580211f069cf2 147 PIRSF PIRSF005384 7 147 1.3E-54 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TMO_1826 44fa73dee432df4b34a580211f069cf2 147 Gene3D G3DSA:3.40.1400.10 1 147 4.8E-56 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TMO_1826 44fa73dee432df4b34a580211f069cf2 147 SUPERFAMILY SSF89623 7 146 3.79E-54 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TMO_2366 9e4a69bc6bb6885a5b5f132d929c46dd 127 SUPERFAMILY SSF53901 1 126 1.13E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2366 9e4a69bc6bb6885a5b5f132d929c46dd 127 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 TMO_2366 9e4a69bc6bb6885a5b5f132d929c46dd 127 Gene3D G3DSA:3.40.47.10 1 127 5.0E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_2366 9e4a69bc6bb6885a5b5f132d929c46dd 127 Pfam PF00108 Thiolase, N-terminal domain 5 125 2.0E-29 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 TMO_0812 8e3efd92917585098417493028c2d442 97 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 21 96 8.9E-29 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted TMO_0812 8e3efd92917585098417493028c2d442 97 Pfam PF13937 Domain of unknown function (DUF4212) 19 94 1.1E-29 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted TMO_0136 a021ff2c65ba818e30e984d92709c597 162 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 32 128 1.1E-16 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_0136 a021ff2c65ba818e30e984d92709c597 162 Pfam PF03061 Thioesterase superfamily 65 138 1.0E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_0136 a021ff2c65ba818e30e984d92709c597 162 SUPERFAMILY SSF54637 18 151 5.25E-33 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0136 a021ff2c65ba818e30e984d92709c597 162 Gene3D G3DSA:3.10.129.10 20 160 3.6E-49 T 14-10-2018 TMO_2531 ac78ac166c4c4e673d27942d2fed6b0c 67 Pfam PF02515 CoA-transferase family III 10 57 9.8E-18 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_2531 ac78ac166c4c4e673d27942d2fed6b0c 67 Gene3D G3DSA:3.40.50.10540 5 66 2.5E-20 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_2531 ac78ac166c4c4e673d27942d2fed6b0c 67 SUPERFAMILY SSF89796 8 59 5.62E-21 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 Gene3D G3DSA:3.40.605.10 550 1037 9.9E-147 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 SUPERFAMILY SSF81935 17 186 1.44E-57 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 PIRSF PIRSF000197 3 1055 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 71 185 9.6E-44 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 SUPERFAMILY SSF51730 188 535 3.92E-109 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 Pfam PF01619 Proline dehydrogenase 199 492 3.5E-92 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 Gene3D G3DSA:3.20.20.220 153 527 1.4E-131 T 14-10-2018 TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 SUPERFAMILY SSF53720 572 1037 8.25E-120 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 837 848 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 528 1033 2.1E-194 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 Gene3D G3DSA:3.40.309.10 812 1005 9.9E-147 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_0608 67ada77703120cf46a17dd279659c1a3 1060 Pfam PF00171 Aldehyde dehydrogenase family 578 1033 2.0E-108 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_3406 8d6bc40cc85938561223cebf8ca5b4cb 363 SUPERFAMILY SSF53800 11 339 1.8E-93 T 14-10-2018 TMO_3406 8d6bc40cc85938561223cebf8ca5b4cb 363 Gene3D G3DSA:3.40.50.1400 169 317 1.2E-97 T 14-10-2018 TMO_3406 8d6bc40cc85938561223cebf8ca5b4cb 363 Pfam PF00762 Ferrochelatase 13 335 9.6E-101 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 TMO_3406 8d6bc40cc85938561223cebf8ca5b4cb 363 Gene3D G3DSA:3.40.50.1400 13 334 1.2E-97 T 14-10-2018 TMO_3406 8d6bc40cc85938561223cebf8ca5b4cb 363 TIGRFAM TIGR00109 hemH: ferrochelatase 10 334 1.8E-78 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 TMO_3406 8d6bc40cc85938561223cebf8ca5b4cb 363 Hamap MF_00323 Ferrochelatase [hemH]. 11 336 32.951 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 TMO_3406 8d6bc40cc85938561223cebf8ca5b4cb 363 ProSitePatterns PS00534 Ferrochelatase signature. 200 218 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 TMO_c0495 9ee207a0d08612b256e9a1bf2b82bbbd 130 Gene3D G3DSA:3.40.630.30 2 123 1.1E-30 T 14-10-2018 TMO_c0495 9ee207a0d08612b256e9a1bf2b82bbbd 130 Pfam PF13673 Acetyltransferase (GNAT) domain 51 110 6.3E-8 T 14-10-2018 IPR000182 GNAT domain TMO_c0495 9ee207a0d08612b256e9a1bf2b82bbbd 130 SUPERFAMILY SSF55729 30 109 4.61E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_c0256 0542a9db4d9650c48f189f98788d1b3f 326 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 298 5.7E-42 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_c0256 0542a9db4d9650c48f189f98788d1b3f 326 Gene3D G3DSA:3.40.190.170 26 326 9.3E-93 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_c0256 0542a9db4d9650c48f189f98788d1b3f 326 SUPERFAMILY SSF53850 125 283 8.47E-7 T 14-10-2018 TMO_b0387 115c45a3ba65d9190f6acc807766dbce 287 PIRSF PIRSF015582 1 287 1.7E-76 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like TMO_b0387 115c45a3ba65d9190f6acc807766dbce 287 SUPERFAMILY SSF51621 5 233 1.5E-59 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_b0387 115c45a3ba65d9190f6acc807766dbce 287 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 222 1.6E-41 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_b0387 115c45a3ba65d9190f6acc807766dbce 287 Gene3D G3DSA:3.20.20.60 1 284 8.8E-85 T 14-10-2018 TMO_0120 ded762fb3227ed37a1f6d32632c1046a 559 Gene3D G3DSA:2.40.110.10 292 414 1.6E-31 T 14-10-2018 TMO_0120 ded762fb3227ed37a1f6d32632c1046a 559 SUPERFAMILY SSF47203 408 559 1.58E-46 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_0120 ded762fb3227ed37a1f6d32632c1046a 559 Gene3D G3DSA:1.20.140.10 415 559 1.0E-43 T 14-10-2018 TMO_0120 ded762fb3227ed37a1f6d32632c1046a 559 SUPERFAMILY SSF56645 176 420 3.93E-70 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_0120 ded762fb3227ed37a1f6d32632c1046a 559 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 178 288 5.3E-32 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_0120 ded762fb3227ed37a1f6d32632c1046a 559 Gene3D G3DSA:1.10.540.10 172 290 9.9E-35 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_0120 ded762fb3227ed37a1f6d32632c1046a 559 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 295 395 6.1E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_0120 ded762fb3227ed37a1f6d32632c1046a 559 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 516 535 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_0120 ded762fb3227ed37a1f6d32632c1046a 559 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 409 558 3.6E-37 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_0453 925b474c7119403c2eaa43729600fcbf 115 SUPERFAMILY SSF50090 40 114 2.2E-19 T 14-10-2018 IPR008990 Electron transport accessory-like domain superfamily TMO_0453 925b474c7119403c2eaa43729600fcbf 115 TIGRFAM TIGR03889 nitrile_acc: nitrile hydratase accessory protein 48 115 2.0E-25 T 14-10-2018 IPR023808 Nitrile hydratase accessory protein, putative TMO_0453 925b474c7119403c2eaa43729600fcbf 115 Gene3D G3DSA:1.10.472.20 36 115 6.7E-15 T 14-10-2018 TMO_0453 925b474c7119403c2eaa43729600fcbf 115 Pfam PF02211 Nitrile hydratase beta subunit 43 114 5.9E-9 T 14-10-2018 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_a0446 a0c3e245921c68fb50f5115b0cc7516b 392 Gene3D G3DSA:1.20.1250.20 4 182 4.7E-13 T 14-10-2018 TMO_a0446 a0c3e245921c68fb50f5115b0cc7516b 392 Pfam PF07690 Major Facilitator Superfamily 9 352 7.1E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_a0446 a0c3e245921c68fb50f5115b0cc7516b 392 SUPERFAMILY SSF103473 5 388 1.57E-37 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_a0446 a0c3e245921c68fb50f5115b0cc7516b 392 Gene3D G3DSA:1.20.1250.20 201 391 2.0E-19 T 14-10-2018 TMO_2679 50fddc93eb88202cce62b2aaca77c3e5 402 Gene3D G3DSA:3.20.20.70 104 318 1.6E-7 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2679 50fddc93eb88202cce62b2aaca77c3e5 402 Pfam PF04055 Radical SAM superfamily 107 284 1.4E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_2679 50fddc93eb88202cce62b2aaca77c3e5 402 SMART SM00729 103 328 4.4E-10 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_2679 50fddc93eb88202cce62b2aaca77c3e5 402 SUPERFAMILY SSF102114 92 334 4.97E-16 T 14-10-2018 TMO_3541 755110a8b42dd53e8c2df42b69ffe1bf 228 SUPERFAMILY SSF55315 114 200 8.64E-12 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like TMO_3541 755110a8b42dd53e8c2df42b69ffe1bf 228 Gene3D G3DSA:3.30.1330.30 114 204 8.7E-14 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like TMO_3541 755110a8b42dd53e8c2df42b69ffe1bf 228 Pfam PF04296 Protein of unknown function (DUF448) 32 103 6.9E-21 T 14-10-2018 IPR007393 Domain of unknown function DUF448 TMO_3541 755110a8b42dd53e8c2df42b69ffe1bf 228 Gene3D G3DSA:3.30.1230.10 25 113 1.7E-15 T 14-10-2018 IPR035931 YlxR-like superfamily TMO_3541 755110a8b42dd53e8c2df42b69ffe1bf 228 SUPERFAMILY SSF64376 29 116 1.18E-23 T 14-10-2018 IPR035931 YlxR-like superfamily TMO_a0430 7baed2622a0f16d76a126de44907c64a 343 SUPERFAMILY SSF52266 102 334 5.5E-11 T 14-10-2018 TMO_3292 7c8d9dd012ab6ac9135b870d20c5fcee 294 SUPERFAMILY SSF53795 96 162 3.05E-13 T 14-10-2018 TMO_3292 7c8d9dd012ab6ac9135b870d20c5fcee 294 Gene3D G3DSA:3.40.50.300 96 170 6.9E-10 T 14-10-2018 TMO_3341 01a998b258bc84ac65944c654d19f283 496 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 238 257 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 TMO_3341 01a998b258bc84ac65944c654d19f283 496 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 16 346 1.4E-98 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TMO_3341 01a998b258bc84ac65944c654d19f283 496 Gene3D G3DSA:3.30.70.1570 383 496 6.7E-25 T 14-10-2018 TMO_3341 01a998b258bc84ac65944c654d19f283 496 SUPERFAMILY SSF53659 9 350 1.19E-113 T 14-10-2018 TMO_3341 01a998b258bc84ac65944c654d19f283 496 SMART SM01329 15 346 5.4E-155 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TMO_3341 01a998b258bc84ac65944c654d19f283 496 Gene3D G3DSA:3.40.718.10 3 375 9.2E-140 T 14-10-2018 TMO_c0545 0c49ee22203d43baf7317011750c082a 202 Pfam PF02525 Flavodoxin-like fold 1 185 1.2E-44 T 14-10-2018 IPR003680 Flavodoxin-like fold TMO_c0545 0c49ee22203d43baf7317011750c082a 202 Gene3D G3DSA:3.40.50.360 1 198 1.3E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_c0545 0c49ee22203d43baf7317011750c082a 202 SUPERFAMILY SSF52218 1 195 1.01E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_c0249 82320a76fffe47b4af48cc04d1026c2b 334 Gene3D G3DSA:1.10.150.170 117 217 3.1E-89 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TMO_c0249 82320a76fffe47b4af48cc04d1026c2b 334 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 12 314 34.447 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TMO_c0249 82320a76fffe47b4af48cc04d1026c2b 334 SUPERFAMILY SSF53335 11 313 4.56E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0249 82320a76fffe47b4af48cc04d1026c2b 334 Gene3D G3DSA:3.40.50.150 12 310 3.1E-89 T 14-10-2018 TMO_c0249 82320a76fffe47b4af48cc04d1026c2b 334 SUPERFAMILY SSF81799 119 215 7.46E-32 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TMO_c0249 82320a76fffe47b4af48cc04d1026c2b 334 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 10 313 1.9E-77 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TMO_c0249 82320a76fffe47b4af48cc04d1026c2b 334 PIRSF PIRSF004486 6 315 1.8E-89 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TMO_c0249 82320a76fffe47b4af48cc04d1026c2b 334 Pfam PF01795 MraW methylase family 10 313 3.9E-84 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TMO_1536 f38dce4406897e6be740b04aa3701933 82 Pfam PF02416 mttA/Hcf106 family 3 52 1.2E-12 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 TMO_1536 f38dce4406897e6be740b04aa3701933 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 78 19.528 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 TMO_1536 f38dce4406897e6be740b04aa3701933 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 2 48 2.5E-19 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 TMO_2536 3f26516d708d7a0d205b9a8402a25490 270 Gene3D G3DSA:1.10.3720.10 17 266 7.0E-45 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2536 3f26516d708d7a0d205b9a8402a25490 270 SUPERFAMILY SSF161098 12 259 1.83E-47 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2536 3f26516d708d7a0d205b9a8402a25490 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 255 8.2E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3298 977e2da62df9d8742f8df2e2a8f7eda7 325 SUPERFAMILY SSF103481 226 305 2.48E-11 T 14-10-2018 TMO_3298 977e2da62df9d8742f8df2e2a8f7eda7 325 Pfam PF00892 EamA-like transporter family 24 161 4.9E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3298 977e2da62df9d8742f8df2e2a8f7eda7 325 Pfam PF00892 EamA-like transporter family 173 304 1.6E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3298 977e2da62df9d8742f8df2e2a8f7eda7 325 SUPERFAMILY SSF103481 56 164 6.41E-13 T 14-10-2018 TMO_2804 e7872c299375fb8f282fdfd0aa3fb661 467 Gene3D G3DSA:3.40.50.1100 108 445 1.2E-149 T 14-10-2018 TMO_2804 e7872c299375fb8f282fdfd0aa3fb661 467 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 412 2.3E-20 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_2804 e7872c299375fb8f282fdfd0aa3fb661 467 Pfam PF14821 Threonine synthase N terminus 2 80 3.1E-27 T 14-10-2018 IPR029144 Threonine synthase, N-terminal TMO_2804 e7872c299375fb8f282fdfd0aa3fb661 467 SUPERFAMILY SSF53686 2 463 6.68E-160 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_2804 e7872c299375fb8f282fdfd0aa3fb661 467 Gene3D G3DSA:3.90.1380.10 1 86 4.4E-27 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily TMO_2804 e7872c299375fb8f282fdfd0aa3fb661 467 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 TMO_2804 e7872c299375fb8f282fdfd0aa3fb661 467 Gene3D G3DSA:3.40.50.1100 97 432 1.2E-149 T 14-10-2018 TMO_2804 e7872c299375fb8f282fdfd0aa3fb661 467 TIGRFAM TIGR00260 thrC: threonine synthase 69 426 4.5E-81 T 14-10-2018 IPR004450 Threonine synthase-like TMO_b0282 96ec212bcd494db8acd3b9ecf6ca0044 337 SUPERFAMILY SSF47240 135 304 1.5E-10 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_b0282 96ec212bcd494db8acd3b9ecf6ca0044 337 Gene3D G3DSA:1.10.620.20 173 291 2.6E-6 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 TMO_b0282 96ec212bcd494db8acd3b9ecf6ca0044 337 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 55 328 1.1E-33 T 14-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF TMO_2940 0a682ca29e0c4a614810f44007ed2310 416 SUPERFAMILY SSF88946 8 77 2.39E-9 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_2940 0a682ca29e0c4a614810f44007ed2310 416 Pfam PF04542 Sigma-70 region 2 19 78 2.5E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_c0618 038ad901383bed0006ecb134867de6a4 324 Pfam PF02517 CAAX protease self-immunity 182 271 1.9E-8 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TMO_1376 ac3650197029059ea7c9cec92e190e1f 133 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 3 130 1.1E-41 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 TMO_3149 44f1bcee4402a401fdc1c3a8f828f248 337 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 337 94.911 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TMO_3149 44f1bcee4402a401fdc1c3a8f828f248 337 Pfam PF03186 CobD/Cbib protein 25 318 3.2E-96 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TMO_3149 44f1bcee4402a401fdc1c3a8f828f248 337 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 23 286 1.6E-58 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TMO_2736 2e55f85f9abbc392c79bf860068d87d2 286 Pfam PF00950 ABC 3 transport family 10 263 2.0E-77 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TMO_2736 2e55f85f9abbc392c79bf860068d87d2 286 SUPERFAMILY SSF81345 4 260 6.41E-38 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_2736 2e55f85f9abbc392c79bf860068d87d2 286 Gene3D G3DSA:1.10.3470.10 37 268 2.5E-8 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1071 85a309165a69b47f8daf1c2b26caa3a1 286 SMART SM01236 112 224 4.9E-5 T 14-10-2018 TMO_1071 85a309165a69b47f8daf1c2b26caa3a1 286 Gene3D G3DSA:1.20.910.10 31 277 3.6E-25 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_1071 85a309165a69b47f8daf1c2b26caa3a1 286 SUPERFAMILY SSF48613 35 272 1.24E-8 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_1647 bbc7b5d942a3f8aa6bb54bc88b5d4c23 176 SUPERFAMILY SSF52016 11 166 8.44E-18 T 14-10-2018 TMO_1647 bbc7b5d942a3f8aa6bb54bc88b5d4c23 176 Gene3D G3DSA:3.20.19.10 5 174 5.2E-29 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 TMO_2453 b196a90889e5a47f6d7d0c294dbbb404 201 Pfam PF16233 Domain of unknown function (DUF4893) 38 199 3.3E-58 T 14-10-2018 IPR032609 Protein of unknown function DUF4893 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 PRINTS PR00603 Cytochrome C1 signature 219 234 1.7E-64 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 PRINTS PR00603 Cytochrome C1 signature 53 72 1.7E-64 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 PRINTS PR00603 Cytochrome C1 signature 180 199 1.7E-64 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 PRINTS PR00603 Cytochrome C1 signature 169 180 1.7E-64 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 PRINTS PR00603 Cytochrome C1 signature 200 219 1.7E-64 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 PRINTS PR00603 Cytochrome C1 signature 33 52 1.7E-64 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 PRINTS PR00603 Cytochrome C1 signature 98 118 1.7E-64 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 PRINTS PR00603 Cytochrome C1 signature 131 155 1.7E-64 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 Gene3D G3DSA:1.10.760.10 25 219 2.7E-87 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 Gene3D G3DSA:1.20.5.100 220 254 2.6E-5 T 14-10-2018 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 SUPERFAMILY SSF46626 27 218 2.58E-72 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 Pfam PF02167 Cytochrome C1 family 35 252 9.7E-98 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TMO_c0152 b45e180d1012afbc761f3ecf6e60f90d 254 SUPERFAMILY SSF81496 219 253 3.66E-5 T 14-10-2018 IPR021157 Cytochrome c1, transmembrane anchor, C-terminal Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TMO_b0295 2b48856c58389b5ec3eac013d502d46d 258 Pfam PF09339 IclR helix-turn-helix domain 8 57 3.3E-9 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_b0295 2b48856c58389b5ec3eac013d502d46d 258 SUPERFAMILY SSF55781 88 252 2.62E-25 T 14-10-2018 TMO_b0295 2b48856c58389b5ec3eac013d502d46d 258 SUPERFAMILY SSF46785 6 78 1.04E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0295 2b48856c58389b5ec3eac013d502d46d 258 Gene3D G3DSA:1.10.10.10 1 76 4.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0295 2b48856c58389b5ec3eac013d502d46d 258 Gene3D G3DSA:3.30.450.40 79 256 1.4E-65 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_1365 c6dbad8ecb418d7aa183b586ddc62bc0 425 Pfam PF09375 Imelysin 43 397 4.2E-94 T 14-10-2018 IPR018976 Imelysin-like domain TMO_1365 c6dbad8ecb418d7aa183b586ddc62bc0 425 Gene3D G3DSA:1.20.1420.20 19 405 5.8E-77 T 14-10-2018 IPR038352 Imelysin-like domain superfamily TMO_1386 f721b299ed1e5cdb96f397db5e1930a4 185 Gene3D G3DSA:3.30.1490.190 121 179 2.8E-17 T 14-10-2018 TMO_1386 f721b299ed1e5cdb96f397db5e1930a4 185 Pfam PF01475 Ferric uptake regulator family 50 168 4.1E-13 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TMO_1386 f721b299ed1e5cdb96f397db5e1930a4 185 Gene3D G3DSA:1.10.10.10 32 119 2.1E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1386 f721b299ed1e5cdb96f397db5e1930a4 185 SUPERFAMILY SSF46785 43 173 2.49E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2402 9c3ec002f9f9fb21868a61e456e444fb 166 Pfam PF05621 Bacterial TniB protein 5 78 2.9E-7 T 14-10-2018 IPR008868 Bacterial TniB TMO_2402 9c3ec002f9f9fb21868a61e456e444fb 166 SUPERFAMILY SSF52540 7 135 2.13E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0021 a982a9c66edc5ad5c8ef4d2b0f92890c 250 Gene3D G3DSA:3.40.50.300 1 242 2.8E-64 T 14-10-2018 TMO_0021 a982a9c66edc5ad5c8ef4d2b0f92890c 250 Pfam PF00005 ABC transporter 23 163 3.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0021 a982a9c66edc5ad5c8ef4d2b0f92890c 250 SMART SM00382 30 220 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0021 a982a9c66edc5ad5c8ef4d2b0f92890c 250 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0021 a982a9c66edc5ad5c8ef4d2b0f92890c 250 SUPERFAMILY SSF52540 3 227 7.52E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0072 31b85be40afb98518ce0af6da7c22bd6 213 Pfam PF01526 Tn3 transposase DDE domain 42 191 3.0E-62 T 14-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 TMO_c0404 385a15a5c7e14cde0d5cb3a32201225e 364 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 35 319 5.4E-52 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TMO_c0404 385a15a5c7e14cde0d5cb3a32201225e 364 Gene3D G3DSA:3.40.50.2300 137 354 1.7E-114 T 14-10-2018 TMO_c0404 385a15a5c7e14cde0d5cb3a32201225e 364 Gene3D G3DSA:3.40.50.2300 35 290 1.7E-114 T 14-10-2018 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR01959 SuhB family inositol monophosphatase signature 161 187 6.3E-25 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR01959 SuhB family inositol monophosphatase signature 20 42 6.3E-25 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR01959 SuhB family inositol monophosphatase signature 203 215 6.3E-25 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR01959 SuhB family inositol monophosphatase signature 109 128 6.3E-25 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 SUPERFAMILY SSF56655 6 263 1.31E-80 T 14-10-2018 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 7.7E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 7.7E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 135 158 7.7E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 7.7E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 7.7E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 7.7E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 Gene3D G3DSA:3.40.190.80 146 271 8.9E-37 T 14-10-2018 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 216 230 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 Pfam PF00459 Inositol monophosphatase family 5 259 4.2E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_0878 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 Gene3D G3DSA:3.30.540.10 2 145 3.2E-49 T 14-10-2018 TMO_2871 9e3acdc5e8f31878823c244b37d34a92 341 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 25 329 3.3E-114 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 TMO_2871 9e3acdc5e8f31878823c244b37d34a92 341 Pfam PF03741 Integral membrane protein TerC family 91 298 4.1E-56 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 TMO_a0467 6404561f8b589511f4ca628b05188bd3 107 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 105 1.4E-33 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 TMO_a0467 6404561f8b589511f4ca628b05188bd3 107 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 20.652 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 TMO_3318 a1cc49d7ca46e24cd6344cbdbd144518 172 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 67 2.9E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_3318 a1cc49d7ca46e24cd6344cbdbd144518 172 SUPERFAMILY SSF53254 1 152 7.07E-25 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_3318 a1cc49d7ca46e24cd6344cbdbd144518 172 Gene3D G3DSA:3.40.50.1240 1 165 6.2E-41 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_3318 a1cc49d7ca46e24cd6344cbdbd144518 172 SMART SM00855 3 107 2.8E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_a0392 da1c51d4371c671a3f571220b4ee92b7 202 Gene3D G3DSA:1.20.1050.10 84 188 6.1E-48 T 14-10-2018 TMO_a0392 da1c51d4371c671a3f571220b4ee92b7 202 Gene3D G3DSA:3.40.30.10 7 192 6.1E-48 T 14-10-2018 TMO_a0392 da1c51d4371c671a3f571220b4ee92b7 202 SUPERFAMILY SSF47616 86 195 1.16E-18 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_a0392 da1c51d4371c671a3f571220b4ee92b7 202 SUPERFAMILY SSF52833 5 86 4.08E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_a0392 da1c51d4371c671a3f571220b4ee92b7 202 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 76 6.2E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_a0519 2d610cc6de2f32452b79bfdfa1ac0f0a 355 Gene3D G3DSA:3.30.1540.10 206 294 4.6E-111 T 14-10-2018 TMO_a0519 2d610cc6de2f32452b79bfdfa1ac0f0a 355 Pfam PF02515 CoA-transferase family III 1 333 2.1E-76 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_a0519 2d610cc6de2f32452b79bfdfa1ac0f0a 355 Gene3D G3DSA:3.40.50.10540 1 312 4.6E-111 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_a0519 2d610cc6de2f32452b79bfdfa1ac0f0a 355 SUPERFAMILY SSF89796 1 334 4.97E-100 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_3144 5d269a8778fa5bbf20abe05d60935b46 261 Pfam PF07722 Peptidase C26 12 230 1.3E-70 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 TMO_3144 5d269a8778fa5bbf20abe05d60935b46 261 SUPERFAMILY SSF52317 36 251 1.25E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_3144 5d269a8778fa5bbf20abe05d60935b46 261 Gene3D G3DSA:3.40.50.880 9 259 1.9E-65 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1414 4e203b1251c71452680188b49e0b5a85 202 Pfam PF01323 DSBA-like thioredoxin domain 5 197 8.0E-32 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TMO_1414 4e203b1251c71452680188b49e0b5a85 202 SUPERFAMILY SSF52833 3 198 1.17E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_1414 4e203b1251c71452680188b49e0b5a85 202 PIRSF PIRSF006386 1 201 4.6E-52 T 14-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TMO_1414 4e203b1251c71452680188b49e0b5a85 202 Gene3D G3DSA:3.40.30.10 4 201 3.9E-50 T 14-10-2018 TMO_c0619 3f8936c58ec24746ddc63897787da314 398 Pfam PF07690 Major Facilitator Superfamily 38 354 8.5E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0619 3f8936c58ec24746ddc63897787da314 398 SUPERFAMILY SSF103473 10 394 2.88E-40 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0619 3f8936c58ec24746ddc63897787da314 398 Gene3D G3DSA:1.20.1250.20 209 397 8.3E-19 T 14-10-2018 TMO_c0619 3f8936c58ec24746ddc63897787da314 398 Gene3D G3DSA:1.20.1250.20 14 203 2.2E-11 T 14-10-2018 TMO_a0167 98182275953b41fb7c613abf60c2ac17 656 Pfam PF00501 AMP-binding enzyme 37 492 3.2E-67 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0167 98182275953b41fb7c613abf60c2ac17 656 Gene3D G3DSA:3.40.50.12780 345 488 2.7E-24 T 14-10-2018 TMO_a0167 98182275953b41fb7c613abf60c2ac17 656 Gene3D G3DSA:3.40.50.12780 28 325 9.9E-41 T 14-10-2018 TMO_a0167 98182275953b41fb7c613abf60c2ac17 656 ProSitePatterns PS00455 Putative AMP-binding domain signature. 209 220 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_a0167 98182275953b41fb7c613abf60c2ac17 656 SUPERFAMILY SSF56801 29 627 2.75E-90 T 14-10-2018 TMO_1501 4e1a5a38d73a2194a4951db093f20fdd 371 Pfam PF01609 Transposase DDE domain 103 341 1.8E-19 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TMO_1501 4e1a5a38d73a2194a4951db093f20fdd 371 Pfam PF13808 DDE_Tnp_1-associated 8 95 2.3E-26 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal TMO_2116 4e1a5a38d73a2194a4951db093f20fdd 371 Pfam PF01609 Transposase DDE domain 103 341 1.8E-19 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TMO_2116 4e1a5a38d73a2194a4951db093f20fdd 371 Pfam PF13808 DDE_Tnp_1-associated 8 95 2.3E-26 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal TMO_0873 4e1a5a38d73a2194a4951db093f20fdd 371 Pfam PF01609 Transposase DDE domain 103 341 1.8E-19 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TMO_0873 4e1a5a38d73a2194a4951db093f20fdd 371 Pfam PF13808 DDE_Tnp_1-associated 8 95 2.3E-26 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal TMO_c0659 3dc411e4fe3f588f3cc7178d4279498c 238 SUPERFAMILY SSF56529 30 235 2.49E-67 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_c0659 3dc411e4fe3f588f3cc7178d4279498c 238 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 34 234 4.2E-50 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 TMO_c0659 3dc411e4fe3f588f3cc7178d4279498c 238 Gene3D G3DSA:3.90.850.10 16 237 2.2E-83 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_1626 a5c4b8629358f5f7dc67476a15371efa 102 Gene3D G3DSA:1.10.150.250 4 90 1.3E-27 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily TMO_1626 a5c4b8629358f5f7dc67476a15371efa 102 SUPERFAMILY SSF109910 3 82 6.41E-24 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily TMO_1626 a5c4b8629358f5f7dc67476a15371efa 102 Pfam PF03937 Flavinator of succinate dehydrogenase 9 81 5.2E-26 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase TMO_c0860 f675f9f763fbc66b4437a332dabd1ed0 104 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 31 96 4.8E-15 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D TMO_c0860 f675f9f763fbc66b4437a332dabd1ed0 104 Gene3D G3DSA:1.10.10.1150 5 97 2.0E-8 T 14-10-2018 TMO_0771 1b38f8a7c10929e2c74decfa8b721052 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 274 294 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 TMO_0771 1b38f8a7c10929e2c74decfa8b721052 390 Gene3D G3DSA:1.20.1090.10 199 389 6.8E-51 T 14-10-2018 TMO_0771 1b38f8a7c10929e2c74decfa8b721052 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 13 377 6.7E-71 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 TMO_0771 1b38f8a7c10929e2c74decfa8b721052 390 Gene3D G3DSA:3.40.50.1970 7 197 5.6E-31 T 14-10-2018 TMO_0771 1b38f8a7c10929e2c74decfa8b721052 390 SUPERFAMILY SSF56796 12 379 2.09E-78 T 14-10-2018 TMO_b0573 4025f330d7a61c058e12bdb82506c3d4 296 Pfam PF00892 EamA-like transporter family 162 290 5.0E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_b0573 4025f330d7a61c058e12bdb82506c3d4 296 Pfam PF00892 EamA-like transporter family 11 142 1.3E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_b0573 4025f330d7a61c058e12bdb82506c3d4 296 SUPERFAMILY SSF103481 199 293 1.31E-10 T 14-10-2018 TMO_b0573 4025f330d7a61c058e12bdb82506c3d4 296 SUPERFAMILY SSF103481 45 146 1.83E-7 T 14-10-2018 TMO_d0033 7d20d02e1d8376faf637321d9ee89188 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 428 5.6E-66 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_b0025 e7de59da9b26a3e4f22273e3640b3c8b 346 Gene3D G3DSA:3.40.190.10 44 313 3.2E-71 T 14-10-2018 TMO_b0025 e7de59da9b26a3e4f22273e3640b3c8b 346 Gene3D G3DSA:3.40.190.10 124 224 3.2E-71 T 14-10-2018 TMO_b0025 e7de59da9b26a3e4f22273e3640b3c8b 346 Pfam PF09084 NMT1/THI5 like 52 263 5.4E-57 T 14-10-2018 IPR015168 SsuA/THI5-like TMO_b0025 e7de59da9b26a3e4f22273e3640b3c8b 346 SUPERFAMILY SSF53850 48 269 1.49E-33 T 14-10-2018 TMO_1527 5102bdb8e83b8bd29e5f9ae8c35fd416 149 Gene3D G3DSA:3.30.565.10 2 146 3.4E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1527 5102bdb8e83b8bd29e5f9ae8c35fd416 149 SUPERFAMILY SSF55874 25 133 1.67E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_1527 5102bdb8e83b8bd29e5f9ae8c35fd416 149 Pfam PF13581 Histidine kinase-like ATPase domain 10 140 4.7E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_1450 f95671bae09265ca2ab3a8365b367e32 955 SUPERFAMILY SSF90123 404 685 2.09E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_1450 f95671bae09265ca2ab3a8365b367e32 955 SUPERFAMILY SSF52540 715 951 5.93E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1450 f95671bae09265ca2ab3a8365b367e32 955 Gene3D G3DSA:1.20.1560.10 398 692 5.0E-16 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TMO_1450 f95671bae09265ca2ab3a8365b367e32 955 Pfam PF00005 ABC transporter 738 886 2.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1450 f95671bae09265ca2ab3a8365b367e32 955 ProSitePatterns PS00211 ABC transporters family signature. 858 872 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1450 f95671bae09265ca2ab3a8365b367e32 955 SMART SM00382 747 936 6.6E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1450 f95671bae09265ca2ab3a8365b367e32 955 Gene3D G3DSA:3.40.50.300 718 955 1.4E-76 T 14-10-2018 TMO_1189 70db8e372f615787bd0f45d00effe592 120 Pfam PF12973 ChrR Cupin-like domain 24 107 4.1E-20 T 14-10-2018 IPR025979 ChrR-like cupin domain TMO_1189 70db8e372f615787bd0f45d00effe592 120 SUPERFAMILY SSF51182 20 115 1.15E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_1189 70db8e372f615787bd0f45d00effe592 120 Gene3D G3DSA:2.60.120.10 17 116 1.8E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_3092 1dc3a56c464f636fc85cb3cbe5b9b595 286 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 274 4.4E-43 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2884 20f33c93953fd537db4bf5e1ee399c90 394 SUPERFAMILY SSF75011 102 250 8.24E-5 T 14-10-2018 TMO_2884 20f33c93953fd537db4bf5e1ee399c90 394 Pfam PF13449 Esterase-like activity of phytase 55 367 2.6E-62 T 14-10-2018 IPR027372 Phytase-like domain TMO_2007 c9e857841c3ce3f85043c17f106e7467 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 233 247 1.4E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2007 c9e857841c3ce3f85043c17f106e7467 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 76 1.4E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2007 c9e857841c3ce3f85043c17f106e7467 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 1.4E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2007 c9e857841c3ce3f85043c17f106e7467 288 Gene3D G3DSA:3.40.50.1820 9 287 7.1E-72 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2007 c9e857841c3ce3f85043c17f106e7467 288 Pfam PF12697 Alpha/beta hydrolase family 38 278 5.3E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2007 c9e857841c3ce3f85043c17f106e7467 288 SUPERFAMILY SSF53474 9 286 5.31E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0877 7f9f45b17eee2eab88cd6eaa4516dbc2 560 Pfam PF00563 EAL domain 303 534 1.6E-62 T 14-10-2018 IPR001633 EAL domain TMO_c0877 7f9f45b17eee2eab88cd6eaa4516dbc2 560 Gene3D G3DSA:3.20.20.450 295 547 4.6E-77 T 14-10-2018 IPR035919 EAL domain superfamily TMO_c0877 7f9f45b17eee2eab88cd6eaa4516dbc2 560 SUPERFAMILY SSF141868 303 547 1.7E-68 T 14-10-2018 IPR035919 EAL domain superfamily TMO_c0877 7f9f45b17eee2eab88cd6eaa4516dbc2 560 SMART SM00052 296 540 2.2E-83 T 14-10-2018 IPR001633 EAL domain TMO_c0877 7f9f45b17eee2eab88cd6eaa4516dbc2 560 Pfam PF12792 CSS motif domain associated with EAL 64 189 1.5E-17 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain TMO_2682 d3245651fc96b9a43f75cb60aaa20320 300 Pfam PF00535 Glycosyl transferase family 2 15 181 7.5E-22 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TMO_2682 d3245651fc96b9a43f75cb60aaa20320 300 SUPERFAMILY SSF53448 7 238 1.45E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_2682 d3245651fc96b9a43f75cb60aaa20320 300 Gene3D G3DSA:3.90.550.10 4 247 1.5E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_b0302 14e711d7a6078f76e94cba844ead9766 352 SUPERFAMILY SSF53756 2 347 2.67E-60 T 14-10-2018 TMO_b0302 14e711d7a6078f76e94cba844ead9766 352 Gene3D G3DSA:3.40.50.2000 3 340 4.9E-45 T 14-10-2018 TMO_b0302 14e711d7a6078f76e94cba844ead9766 352 Pfam PF13439 Glycosyltransferase Family 4 1 151 8.5E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TMO_b0302 14e711d7a6078f76e94cba844ead9766 352 Gene3D G3DSA:3.40.50.2000 154 325 4.9E-45 T 14-10-2018 TMO_b0302 14e711d7a6078f76e94cba844ead9766 352 Pfam PF00534 Glycosyl transferases group 1 174 321 1.3E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 TMO_0655 0fe249b1af00c57ec8de46bc5337e573 311 Pfam PF01464 Transglycosylase SLT domain 59 183 1.6E-6 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 TMO_0655 0fe249b1af00c57ec8de46bc5337e573 311 SUPERFAMILY SSF53955 58 201 1.2E-12 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_1666 02d20bcfd2ef6bab4f8552b499375b5b 318 Gene3D G3DSA:3.40.190.120 142 255 2.0E-88 T 14-10-2018 TMO_1666 02d20bcfd2ef6bab4f8552b499375b5b 318 SUPERFAMILY SSF53850 39 317 7.38E-55 T 14-10-2018 TMO_1666 02d20bcfd2ef6bab4f8552b499375b5b 318 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 39 313 7.5E-54 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 TMO_1666 02d20bcfd2ef6bab4f8552b499375b5b 318 Gene3D G3DSA:3.40.190.10 41 315 2.0E-88 T 14-10-2018 TMO_3525 8410d007776af110546c72da4a057ada 243 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 9 228 8.5E-48 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 TMO_3525 8410d007776af110546c72da4a057ada 243 Gene3D G3DSA:3.30.420.40 9 228 2.5E-43 T 14-10-2018 TMO_3525 8410d007776af110546c72da4a057ada 243 Gene3D G3DSA:3.30.420.40 101 198 2.5E-43 T 14-10-2018 TMO_3525 8410d007776af110546c72da4a057ada 243 Pfam PF00814 Glycoprotease family 38 138 1.3E-21 T 14-10-2018 IPR000905 Gcp-like domain TMO_3525 8410d007776af110546c72da4a057ada 243 SUPERFAMILY SSF53067 123 224 5.44E-8 T 14-10-2018 TMO_3525 8410d007776af110546c72da4a057ada 243 SUPERFAMILY SSF53067 9 107 3.56E-24 T 14-10-2018 TMO_0597 36208d21a8522e948b75a50f15658f11 574 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 4.2E-11 T 14-10-2018 TMO_0597 36208d21a8522e948b75a50f15658f11 574 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 4.2E-11 T 14-10-2018 TMO_0597 36208d21a8522e948b75a50f15658f11 574 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 4.2E-11 T 14-10-2018 TMO_0597 36208d21a8522e948b75a50f15658f11 574 Gene3D G3DSA:3.50.50.60 5 569 1.9E-188 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0597 36208d21a8522e948b75a50f15658f11 574 SUPERFAMILY SSF51905 4 365 4.31E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0597 36208d21a8522e948b75a50f15658f11 574 Gene3D G3DSA:1.10.10.1370 434 559 1.9E-188 T 14-10-2018 TMO_0597 36208d21a8522e948b75a50f15658f11 574 Pfam PF01494 FAD binding domain 4 320 1.7E-30 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 TMO_0999 651bd59e974182ef5c5338532351aad8 184 Pfam PF00692 dUTPase 78 179 1.7E-5 T 14-10-2018 IPR029054 dUTPase-like TMO_0999 651bd59e974182ef5c5338532351aad8 184 Hamap MF_00146 dCTP deaminase [dcd]. 1 184 28.784 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 TMO_0999 651bd59e974182ef5c5338532351aad8 184 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 10 183 1.0E-48 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 TMO_0999 651bd59e974182ef5c5338532351aad8 184 Gene3D G3DSA:2.70.40.10 1 156 2.0E-51 T 14-10-2018 IPR036157 dUTPase-like superfamily TMO_0999 651bd59e974182ef5c5338532351aad8 184 SUPERFAMILY SSF51283 3 183 1.96E-49 T 14-10-2018 IPR036157 dUTPase-like superfamily TMO_b0084 0e86a1bc105b0f13ba361f7a74e3dea3 227 SUPERFAMILY SSF48150 42 186 3.14E-30 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TMO_b0084 0e86a1bc105b0f13ba361f7a74e3dea3 227 Gene3D G3DSA:1.10.340.30 34 159 1.2E-20 T 14-10-2018 TMO_b0084 0e86a1bc105b0f13ba361f7a74e3dea3 227 Pfam PF03352 Methyladenine glycosylase 55 139 4.3E-16 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 TMO_2718 55fa057da41b9f54f37929fd861da191 256 Pfam PF09335 SNARE associated Golgi protein 88 204 1.3E-18 T 14-10-2018 IPR032816 SNARE associated Golgi protein TMO_c0151 82a1c25416047d6d2e43aaa2cdf39309 306 Pfam PF01048 Phosphorylase superfamily 21 257 5.2E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TMO_c0151 82a1c25416047d6d2e43aaa2cdf39309 306 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 19 286 40.192 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 TMO_c0151 82a1c25416047d6d2e43aaa2cdf39309 306 SUPERFAMILY SSF53167 18 286 4.3E-91 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TMO_c0151 82a1c25416047d6d2e43aaa2cdf39309 306 Gene3D G3DSA:3.40.50.1580 14 300 6.7E-96 T 14-10-2018 TMO_c0151 82a1c25416047d6d2e43aaa2cdf39309 306 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 21 258 4.1E-89 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 TMO_2065 5c7a0221308ba8326690f170769168d6 538 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 3 526 5.1E-228 T 14-10-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family TMO_2065 5c7a0221308ba8326690f170769168d6 538 Gene3D G3DSA:3.30.470.30 207 403 2.1E-40 T 14-10-2018 TMO_2065 5c7a0221308ba8326690f170769168d6 538 Pfam PF04675 DNA ligase N terminus 3 161 2.3E-5 T 14-10-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 TMO_2065 5c7a0221308ba8326690f170769168d6 538 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 230 238 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 TMO_2065 5c7a0221308ba8326690f170769168d6 538 Pfam PF01068 ATP dependent DNA ligase domain 219 403 3.0E-26 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 TMO_2065 5c7a0221308ba8326690f170769168d6 538 Pfam PF04679 ATP dependent DNA ligase C terminal region 424 514 2.0E-13 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 TMO_2065 5c7a0221308ba8326690f170769168d6 538 SUPERFAMILY SSF50249 408 528 3.6E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_2065 5c7a0221308ba8326690f170769168d6 538 Gene3D G3DSA:2.40.50.140 407 532 5.0E-32 T 14-10-2018 TMO_2065 5c7a0221308ba8326690f170769168d6 538 SUPERFAMILY SSF56091 203 403 2.04E-49 T 14-10-2018 TMO_d0051 290c642894f37a9758adefa598b19c99 659 Pfam PF01032 FecCD transport family 35 327 6.6E-58 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_d0051 290c642894f37a9758adefa598b19c99 659 Pfam PF01032 FecCD transport family 382 655 3.6E-63 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_d0051 290c642894f37a9758adefa598b19c99 659 Gene3D G3DSA:1.10.3470.10 349 659 3.6E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_d0051 290c642894f37a9758adefa598b19c99 659 Gene3D G3DSA:1.10.3470.10 8 333 1.5E-60 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_d0051 290c642894f37a9758adefa598b19c99 659 SUPERFAMILY SSF81345 9 329 2.35E-53 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_d0051 290c642894f37a9758adefa598b19c99 659 SUPERFAMILY SSF81345 345 657 6.54E-58 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 SUPERFAMILY SSF103190 46 178 1.02E-16 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 Gene3D G3DSA:3.30.450.20 41 167 1.3E-69 T 14-10-2018 TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 SUPERFAMILY SSF47384 380 448 4.12E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 Pfam PF02743 Cache domain 22 209 1.3E-13 T 14-10-2018 IPR033479 Double Cache domain 1 TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 SMART SM00387 493 604 1.6E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 Gene3D G3DSA:3.30.565.10 451 607 4.2E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 SMART SM00388 383 451 1.7E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 582 7.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 7.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 7.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 601 7.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 SUPERFAMILY SSF55874 442 600 1.96E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 602 4.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 Gene3D G3DSA:1.10.287.130 359 446 7.0E-18 T 14-10-2018 TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 PIRSF PIRSF036431 1 609 1.2E-191 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 Gene3D G3DSA:3.30.450.20 30 283 1.3E-69 T 14-10-2018 TMO_a0152 37edc767e4163c8facff7e63c76d4b53 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 383 448 2.1E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_1900 eaab29e61aa4ed236a47d9dec96d6c21 805 Gene3D G3DSA:2.140.10.10 556 804 2.8E-38 T 14-10-2018 TMO_1900 eaab29e61aa4ed236a47d9dec96d6c21 805 Gene3D G3DSA:2.140.10.10 167 542 1.5E-114 T 14-10-2018 TMO_1900 eaab29e61aa4ed236a47d9dec96d6c21 805 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 20 803 4.1E-294 T 14-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 TMO_1900 eaab29e61aa4ed236a47d9dec96d6c21 805 Pfam PF13360 PQQ-like domain 682 771 4.7E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TMO_1900 eaab29e61aa4ed236a47d9dec96d6c21 805 Pfam PF13360 PQQ-like domain 228 382 9.4E-5 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TMO_1900 eaab29e61aa4ed236a47d9dec96d6c21 805 SUPERFAMILY SSF50998 172 803 3.79E-147 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TMO_1900 eaab29e61aa4ed236a47d9dec96d6c21 805 Pfam PF01011 PQQ enzyme repeat 443 472 3.7E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TMO_1900 eaab29e61aa4ed236a47d9dec96d6c21 805 SMART SM00564 228 259 0.0066 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_1900 eaab29e61aa4ed236a47d9dec96d6c21 805 SMART SM00564 343 384 26.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_1900 eaab29e61aa4ed236a47d9dec96d6c21 805 SMART SM00564 726 759 8.3 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_1562 264455d3e0bb41ea34a7917a13a3aa60 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 273 1.2E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1562 264455d3e0bb41ea34a7917a13a3aa60 279 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 269 1.4E-90 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 TMO_1562 264455d3e0bb41ea34a7917a13a3aa60 279 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 11 274 6.6E-115 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 TMO_1562 264455d3e0bb41ea34a7917a13a3aa60 279 SUPERFAMILY SSF161098 17 270 3.46E-51 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1562 264455d3e0bb41ea34a7917a13a3aa60 279 Gene3D G3DSA:1.10.3720.10 16 275 1.2E-63 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 SUPERFAMILY SSF48264 9 405 2.36E-93 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 Gene3D G3DSA:1.10.630.10 2 411 1.9E-133 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 Pfam PF00067 Cytochrome P450 85 268 6.9E-9 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 Pfam PF00067 Cytochrome P450 276 371 2.4E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 135 151 3.4E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 196 218 3.4E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 279 290 3.4E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 345 354 3.4E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 354 365 3.4E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 296 323 3.4E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 324 339 3.4E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 89 100 3.4E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 152 167 3.4E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_0531 8b30e390fda114b0e323f6628c169c8d 411 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 347 356 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 TMO_3457 f6741eaa7206a78ed57b8fbee57f08d6 510 SUPERFAMILY SSF53649 4 426 9.81E-46 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TMO_3457 f6741eaa7206a78ed57b8fbee57f08d6 510 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 4 312 7.2E-35 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 TMO_3457 f6741eaa7206a78ed57b8fbee57f08d6 510 Gene3D G3DSA:3.40.720.10 1 284 1.3E-43 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TMO_b0406 a0b082de35e390f7a5fd6ded211e8b2d 247 SMART SM00382 38 221 0.002 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0406 a0b082de35e390f7a5fd6ded211e8b2d 247 Pfam PF00005 ABC transporter 30 173 2.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0406 a0b082de35e390f7a5fd6ded211e8b2d 247 Gene3D G3DSA:3.40.50.300 9 245 1.3E-53 T 14-10-2018 TMO_b0406 a0b082de35e390f7a5fd6ded211e8b2d 247 SUPERFAMILY SSF52540 13 243 4.87E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0507 e3feba44ec9f533595fa638e41484d00 205 Gene3D G3DSA:3.40.50.1240 46 202 9.7E-21 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_0507 e3feba44ec9f533595fa638e41484d00 205 SUPERFAMILY SSF53254 56 195 2.55E-12 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_0311 e61281463ff346acde5f1efd4e59108a 584 Pfam PF13382 Adenine deaminase C-terminal domain 413 579 3.4E-66 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 TMO_0311 e61281463ff346acde5f1efd4e59108a 584 SUPERFAMILY SSF51338 28 365 5.11E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_0311 e61281463ff346acde5f1efd4e59108a 584 Hamap MF_01518 Adenine deaminase [ade]. 37 583 36.489 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 TMO_0311 e61281463ff346acde5f1efd4e59108a 584 Gene3D G3DSA:3.20.20.140 88 329 6.8E-119 T 14-10-2018 TMO_0311 e61281463ff346acde5f1efd4e59108a 584 Gene3D G3DSA:2.30.40.10 30 365 6.8E-119 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_0311 e61281463ff346acde5f1efd4e59108a 584 Pfam PF01979 Amidohydrolase family 84 365 1.2E-22 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_0311 e61281463ff346acde5f1efd4e59108a 584 SUPERFAMILY SSF51556 88 334 1.27E-31 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_0311 e61281463ff346acde5f1efd4e59108a 584 TIGRFAM TIGR01178 ade: adenine deaminase 37 582 4.2E-169 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 TMO_3161 dae43b4120d632fc96f0659f067ba406 320 SUPERFAMILY SSF103481 53 154 2.22E-17 T 14-10-2018 TMO_3161 dae43b4120d632fc96f0659f067ba406 320 SUPERFAMILY SSF103481 194 292 2.48E-14 T 14-10-2018 TMO_3161 dae43b4120d632fc96f0659f067ba406 320 Pfam PF00892 EamA-like transporter family 160 289 1.7E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3161 dae43b4120d632fc96f0659f067ba406 320 Pfam PF00892 EamA-like transporter family 20 150 1.8E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_2945 fd2a0064f4cd36150a75c510306cf286 288 Pfam PF04632 Fusaric acid resistance protein family 4 260 2.3E-23 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 TMO_a0092 5d08148af454c256c9eb9a4a3ae7424e 157 Gene3D G3DSA:2.30.110.20 1 157 8.5E-45 T 14-10-2018 IPR036624 Hcp1-like superfamily TMO_a0092 5d08148af454c256c9eb9a4a3ae7424e 157 Pfam PF05638 Type VI secretion system effector, Hcp 3 132 2.1E-34 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp TMO_a0092 5d08148af454c256c9eb9a4a3ae7424e 157 SUPERFAMILY SSF141452 2 154 5.1E-37 T 14-10-2018 IPR036624 Hcp1-like superfamily TMO_c0578 387bb2c08a20d9e6342279bbec5c3aa7 89 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 8 84 6.2E-24 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system TMO_c0578 387bb2c08a20d9e6342279bbec5c3aa7 89 Gene3D G3DSA:3.10.450.530 1 87 9.3E-18 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily TMO_2903 4cb046e5626677702e2d0a2fdb7ddbf0 262 Pfam PF10099 Anti-sigma-K factor rskA 68 255 1.5E-26 T 14-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 TMO_2903 4cb046e5626677702e2d0a2fdb7ddbf0 262 Gene3D G3DSA:1.10.10.1320 13 100 8.4E-5 T 14-10-2018 TMO_1144 23760ea99974c169389fcbbe7b9783a3 234 Gene3D G3DSA:1.20.1050.10 88 225 2.4E-40 T 14-10-2018 TMO_1144 23760ea99974c169389fcbbe7b9783a3 234 Gene3D G3DSA:3.40.30.10 1 87 2.0E-30 T 14-10-2018 TMO_1144 23760ea99974c169389fcbbe7b9783a3 234 SUPERFAMILY SSF52833 2 83 7.63E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_1144 23760ea99974c169389fcbbe7b9783a3 234 Pfam PF13410 Glutathione S-transferase, C-terminal domain 127 194 7.4E-12 T 14-10-2018 TMO_1144 23760ea99974c169389fcbbe7b9783a3 234 SUPERFAMILY SSF47616 89 204 1.95E-30 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_1144 23760ea99974c169389fcbbe7b9783a3 234 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 80 6.2E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_1736 5f90909e0a07454a28670defa7aa5afc 254 Pfam PF10531 SLBB domain 134 188 5.6E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1736 5f90909e0a07454a28670defa7aa5afc 254 Gene3D G3DSA:3.10.560.10 125 215 3.2E-15 T 14-10-2018 TMO_1736 5f90909e0a07454a28670defa7aa5afc 254 Gene3D G3DSA:3.30.1950.10 63 124 3.9E-7 T 14-10-2018 TMO_1736 5f90909e0a07454a28670defa7aa5afc 254 Pfam PF02563 Polysaccharide biosynthesis/export protein 56 127 7.1E-16 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 TMO_3045 b7158b5d0447ee0237a419d797f113e9 308 Pfam PF13391 HNH endonuclease 203 256 4.5E-7 T 14-10-2018 IPR003615 HNH nuclease TMO_1418 2524a709a37042caa5bd26493e9fcb19 544 Gene3D G3DSA:3.10.105.10 302 520 7.7E-121 T 14-10-2018 TMO_1418 2524a709a37042caa5bd26493e9fcb19 544 SUPERFAMILY SSF53850 40 541 1.81E-116 T 14-10-2018 TMO_1418 2524a709a37042caa5bd26493e9fcb19 544 Gene3D G3DSA:3.90.76.10 57 222 7.7E-121 T 14-10-2018 TMO_1418 2524a709a37042caa5bd26493e9fcb19 544 PIRSF PIRSF002741 8 543 1.4E-85 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_1418 2524a709a37042caa5bd26493e9fcb19 544 Gene3D G3DSA:3.40.190.10 223 530 7.7E-121 T 14-10-2018 TMO_1418 2524a709a37042caa5bd26493e9fcb19 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 456 1.6E-83 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_c0713 094f237b33116bf78f35c520f685e4c1 160 Pfam PF04657 Putative inner membrane exporter, YdcZ 7 145 1.6E-38 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ TMO_3439 8dc61235015878bd5f33ed1f77712c8d 275 Gene3D G3DSA:3.40.50.150 11 221 7.6E-9 T 14-10-2018 TMO_3439 8dc61235015878bd5f33ed1f77712c8d 275 SUPERFAMILY SSF53335 16 204 7.03E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1268 f31d130369d8d785ded4da636fc3a6e9 486 Pfam PF13353 4Fe-4S single cluster domain 87 199 1.9E-5 T 14-10-2018 TMO_1268 f31d130369d8d785ded4da636fc3a6e9 486 SUPERFAMILY SSF102114 95 419 2.75E-31 T 14-10-2018 TMO_1268 f31d130369d8d785ded4da636fc3a6e9 486 TIGRFAM TIGR03978 rSAM_paired_1: His-Xaa-Ser system radical SAM maturase HxsB 6 471 3.6E-157 T 14-10-2018 IPR024023 His-Xaa-Ser system radical SAM maturase HxsB TMO_1268 f31d130369d8d785ded4da636fc3a6e9 486 Gene3D G3DSA:3.20.20.70 89 461 6.8E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1268 f31d130369d8d785ded4da636fc3a6e9 486 Pfam PF04055 Radical SAM superfamily 95 237 6.1E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_3134 4ff3e0045d4518fd26c96a2967ddbf0e 222 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 207 7.5E-27 T 14-10-2018 IPR003111 Lon, substrate-binding domain TMO_3134 4ff3e0045d4518fd26c96a2967ddbf0e 222 SMART SM00464 11 208 2.0E-11 T 14-10-2018 IPR003111 Lon, substrate-binding domain TMO_3134 4ff3e0045d4518fd26c96a2967ddbf0e 222 Gene3D G3DSA:2.30.130.40 5 123 7.3E-28 T 14-10-2018 TMO_3134 4ff3e0045d4518fd26c96a2967ddbf0e 222 SUPERFAMILY SSF88697 11 207 1.39E-47 T 14-10-2018 IPR015947 PUA-like superfamily TMO_2100 da1e2da9e9e2d7be21ece2cc9d137abc 381 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 356 1.1E-162 T 14-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 TMO_2100 da1e2da9e9e2d7be21ece2cc9d137abc 381 PIRSF PIRSF007313 1 367 1.1E-159 T 14-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 TMO_3504 0c409f44d68065fda6683b589ea199cc 512 SUPERFAMILY SSF56801 7 511 4.84E-154 T 14-10-2018 TMO_3504 0c409f44d68065fda6683b589ea199cc 512 Gene3D G3DSA:3.40.50.12780 1 407 1.3E-116 T 14-10-2018 TMO_3504 0c409f44d68065fda6683b589ea199cc 512 Gene3D G3DSA:3.30.300.310 410 511 1.2E-32 T 14-10-2018 TMO_3504 0c409f44d68065fda6683b589ea199cc 512 Pfam PF13193 AMP-binding enzyme C-terminal domain 423 498 2.4E-23 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_3504 0c409f44d68065fda6683b589ea199cc 512 Pfam PF00501 AMP-binding enzyme 15 414 3.2E-104 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_1586 f56727cafa94901c085ada9d07b9a8ed 235 PRINTS PR00407 Eukaryotic molybdopterin domain signature 180 193 8.4E-5 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 TMO_1586 f56727cafa94901c085ada9d07b9a8ed 235 PRINTS PR00407 Eukaryotic molybdopterin domain signature 196 209 8.4E-5 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 TMO_1586 f56727cafa94901c085ada9d07b9a8ed 235 PRINTS PR00407 Eukaryotic molybdopterin domain signature 163 179 8.4E-5 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 TMO_1586 f56727cafa94901c085ada9d07b9a8ed 235 Gene3D G3DSA:3.90.420.10 63 234 4.2E-51 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 TMO_1586 f56727cafa94901c085ada9d07b9a8ed 235 Pfam PF00174 Oxidoreductase molybdopterin binding domain 74 217 3.6E-37 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 TMO_1586 f56727cafa94901c085ada9d07b9a8ed 235 SUPERFAMILY SSF56524 51 235 1.57E-61 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 TMO_c0057 d8a02907bef132b0f3d9ca1f69ca56bc 245 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 45 242 7.0E-86 T 14-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 TMO_a0164 ce966f963201caac109954f37538ca02 426 Pfam PF13458 Periplasmic binding protein 38 394 2.0E-59 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_a0164 ce966f963201caac109954f37538ca02 426 Gene3D G3DSA:3.40.50.2300 155 295 2.5E-56 T 14-10-2018 TMO_a0164 ce966f963201caac109954f37538ca02 426 Gene3D G3DSA:3.40.50.2300 50 365 2.5E-56 T 14-10-2018 TMO_a0164 ce966f963201caac109954f37538ca02 426 SUPERFAMILY SSF53822 38 397 2.03E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_c0356 f8a2bd34dee6d0c6a36ca99803842c72 223 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 42 9.9E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0356 f8a2bd34dee6d0c6a36ca99803842c72 223 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 42 61 9.9E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_c0356 f8a2bd34dee6d0c6a36ca99803842c72 223 SMART SM00345 13 71 2.6E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0356 f8a2bd34dee6d0c6a36ca99803842c72 223 SUPERFAMILY SSF48008 78 212 3.92E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_c0356 f8a2bd34dee6d0c6a36ca99803842c72 223 SUPERFAMILY SSF46785 7 75 2.59E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0356 f8a2bd34dee6d0c6a36ca99803842c72 223 Pfam PF07729 FCD domain 81 204 1.1E-22 T 14-10-2018 IPR011711 GntR, C-terminal TMO_c0356 f8a2bd34dee6d0c6a36ca99803842c72 223 SMART SM00895 81 205 2.0E-20 T 14-10-2018 IPR011711 GntR, C-terminal TMO_c0356 f8a2bd34dee6d0c6a36ca99803842c72 223 Gene3D G3DSA:1.20.120.530 71 218 8.6E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_c0356 f8a2bd34dee6d0c6a36ca99803842c72 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 71 1.1E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0356 f8a2bd34dee6d0c6a36ca99803842c72 223 Gene3D G3DSA:1.10.10.10 1 70 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0729 ee548849a768136ea907634c1dfe5b60 247 Pfam PF14497 Glutathione S-transferase, C-terminal domain 114 223 4.1E-25 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal TMO_c0729 ee548849a768136ea907634c1dfe5b60 247 SUPERFAMILY SSF47616 88 244 7.38E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_c0729 ee548849a768136ea907634c1dfe5b60 247 Gene3D G3DSA:1.20.1050.10 91 212 5.3E-83 T 14-10-2018 TMO_c0729 ee548849a768136ea907634c1dfe5b60 247 Gene3D G3DSA:3.40.30.10 4 241 5.3E-83 T 14-10-2018 TMO_c0729 ee548849a768136ea907634c1dfe5b60 247 SUPERFAMILY SSF52833 1 88 2.44E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_3089 906c6b757eb35ac0ea15db56a07f6e34 240 SUPERFAMILY SSF161098 9 208 3.53E-39 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3089 906c6b757eb35ac0ea15db56a07f6e34 240 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 117 1.6E-20 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_3089 906c6b757eb35ac0ea15db56a07f6e34 240 Gene3D G3DSA:1.10.3720.10 4 225 1.1E-46 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3089 906c6b757eb35ac0ea15db56a07f6e34 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 218 5.0E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_d0042 703a29a5e627fc4b085f96b4b858b9f7 196 SUPERFAMILY SSF47413 12 80 2.82E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_d0042 703a29a5e627fc4b085f96b4b858b9f7 196 Gene3D G3DSA:2.60.120.10 104 194 4.8E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_d0042 703a29a5e627fc4b085f96b4b858b9f7 196 Pfam PF07883 Cupin domain 123 190 6.0E-18 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_d0042 703a29a5e627fc4b085f96b4b858b9f7 196 SUPERFAMILY SSF51182 66 195 1.11E-26 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_d0042 703a29a5e627fc4b085f96b4b858b9f7 196 Gene3D G3DSA:1.10.260.40 13 95 7.8E-19 T 14-10-2018 TMO_d0042 703a29a5e627fc4b085f96b4b858b9f7 196 SMART SM00530 18 73 1.1E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_d0042 703a29a5e627fc4b085f96b4b858b9f7 196 Pfam PF13560 Helix-turn-helix domain 15 72 2.3E-15 T 14-10-2018 TMO_a0010 77de0b42258750cb9d7dc89c3a138784 394 Gene3D G3DSA:1.25.40.10 22 210 2.3E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_a0010 77de0b42258750cb9d7dc89c3a138784 394 SUPERFAMILY SSF48452 53 200 2.41E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_a0010 77de0b42258750cb9d7dc89c3a138784 394 Gene3D G3DSA:2.60.120.620 219 388 4.5E-20 T 14-10-2018 TMO_a0010 77de0b42258750cb9d7dc89c3a138784 394 Pfam PF13759 Putative 2OG-Fe(II) oxygenase 296 381 8.2E-16 T 14-10-2018 IPR012668 Conserved hypothetical protein CHP02466 TMO_b0488 3613fac72acabbe1562c8db4ed2668df 148 SUPERFAMILY SSF54593 4 137 2.96E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0488 3613fac72acabbe1562c8db4ed2668df 148 Gene3D G3DSA:3.10.180.10 4 145 1.0E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0185 4894b090b855f713177545259871b2f0 260 SUPERFAMILY SSF48498 119 242 3.16E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_b0185 4894b090b855f713177545259871b2f0 260 SUPERFAMILY SSF46689 43 116 3.33E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0185 4894b090b855f713177545259871b2f0 260 Gene3D G3DSA:1.10.357.10 41 241 6.9E-40 T 14-10-2018 TMO_b0185 4894b090b855f713177545259871b2f0 260 Pfam PF00440 Bacterial regulatory proteins, tetR family 51 96 2.5E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0185 4894b090b855f713177545259871b2f0 260 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 72 95 8.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0185 4894b090b855f713177545259871b2f0 260 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 64 8.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0276 ae869976ce922ef428b510692936fe4f 455 Gene3D G3DSA:3.40.640.10 66 345 5.4E-161 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0276 ae869976ce922ef428b510692936fe4f 455 SUPERFAMILY SSF53383 12 449 1.1E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_0276 ae869976ce922ef428b510692936fe4f 455 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_0276 ae869976ce922ef428b510692936fe4f 455 Pfam PF00202 Aminotransferase class-III 28 447 1.4E-92 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_0276 ae869976ce922ef428b510692936fe4f 455 Gene3D G3DSA:3.90.1150.10 12 447 5.4E-161 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_0276 ae869976ce922ef428b510692936fe4f 455 PIRSF PIRSF000521 3 450 2.8E-35 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_0292 614a9de7d73666abf1f0f0ea512496e0 342 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 249 321 3.1E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_0292 614a9de7d73666abf1f0f0ea512496e0 342 Gene3D G3DSA:3.40.50.300 19 342 1.5E-90 T 14-10-2018 TMO_0292 614a9de7d73666abf1f0f0ea512496e0 342 SUPERFAMILY SSF52540 20 269 3.04E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0292 614a9de7d73666abf1f0f0ea512496e0 342 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 247 340 1.7E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_0292 614a9de7d73666abf1f0f0ea512496e0 342 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0292 614a9de7d73666abf1f0f0ea512496e0 342 Pfam PF00005 ABC transporter 46 197 8.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0292 614a9de7d73666abf1f0f0ea512496e0 342 SMART SM00382 55 247 3.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0077 168550035116a464711ff1997b4698d1 1241 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 14 1238 0.0 T 14-10-2018 IPR017731 Type VI secretion system, IcmF TMO_a0077 168550035116a464711ff1997b4698d1 1241 Pfam PF14331 ImcF-related N-terminal domain 208 477 4.3E-100 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain TMO_a0077 168550035116a464711ff1997b4698d1 1241 Pfam PF06744 Type VI secretion protein IcmF C-terminal 991 1190 3.6E-58 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal TMO_a0077 168550035116a464711ff1997b4698d1 1241 SUPERFAMILY SSF52540 121 306 2.04E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0077 168550035116a464711ff1997b4698d1 1241 Pfam PF06761 Intracellular multiplication and human macrophage-killing 532 836 2.1E-83 T 14-10-2018 IPR009612 ImcF-related TMO_0318 52cad26c1e8c2e1f3698b48dd21499f2 103 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.4E-22 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_0318 52cad26c1e8c2e1f3698b48dd21499f2 103 SUPERFAMILY SSF143800 1 81 4.32E-26 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0318 52cad26c1e8c2e1f3698b48dd21499f2 103 Pfam PF00830 Ribosomal L28 family 3 61 2.4E-22 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0318 52cad26c1e8c2e1f3698b48dd21499f2 103 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 20.904 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_0318 52cad26c1e8c2e1f3698b48dd21499f2 103 Gene3D G3DSA:2.30.170.40 2 76 1.3E-24 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_b0524 f85c806ccad872268ea98debc6b4c18c 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 441 516 2.8E-13 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0524 f85c806ccad872268ea98debc6b4c18c 548 SUPERFAMILY SSF56801 25 526 1.01E-119 T 14-10-2018 TMO_b0524 f85c806ccad872268ea98debc6b4c18c 548 Gene3D G3DSA:3.40.50.12780 12 425 1.1E-84 T 14-10-2018 TMO_b0524 f85c806ccad872268ea98debc6b4c18c 548 Gene3D G3DSA:3.30.300.30 426 526 7.0E-27 T 14-10-2018 TMO_b0524 f85c806ccad872268ea98debc6b4c18c 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_b0524 f85c806ccad872268ea98debc6b4c18c 548 Pfam PF00501 AMP-binding enzyme 33 432 2.7E-73 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Gene3D G3DSA:2.180.10.10 768 1325 1.8E-34 T 14-10-2018 TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Pfam PF05593 RHS Repeat 569 603 1.2E-7 T 14-10-2018 IPR031325 RHS repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Pfam PF05593 RHS Repeat 676 712 1.3E-8 T 14-10-2018 IPR031325 RHS repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Pfam PF05593 RHS Repeat 844 871 4.3E-5 T 14-10-2018 IPR031325 RHS repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Pfam PF05593 RHS Repeat 697 733 1.1E-4 T 14-10-2018 IPR031325 RHS repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Pfam PF05593 RHS Repeat 608 644 8.2E-9 T 14-10-2018 IPR031325 RHS repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Pfam PF05593 RHS Repeat 650 692 5.8E-8 T 14-10-2018 IPR031325 RHS repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Pfam PF05593 RHS Repeat 802 838 3.6E-7 T 14-10-2018 IPR031325 RHS repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Pfam PF05593 RHS Repeat 1120 1158 2.8E-6 T 14-10-2018 IPR031325 RHS repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Pfam PF05593 RHS Repeat 719 755 1.7E-5 T 14-10-2018 IPR031325 RHS repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 945 979 0.0014 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 630 659 2.4E-5 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 587 627 1.1E-8 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 824 860 2.0E-6 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 781 821 5.4E-8 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 739 774 0.0029 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 697 734 9.4E-5 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 671 695 3.2E-4 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 608 647 4.9E-7 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 844 872 5.1E-5 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 566 604 7.4E-6 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1120 1152 1.2E-6 T 14-10-2018 IPR006530 YD repeat TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Gene3D G3DSA:2.60.200.60 64 150 1.9E-12 T 14-10-2018 TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1246 1325 5.2E-22 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Pfam PF05488 PAAR motif 77 140 7.3E-11 T 14-10-2018 IPR008727 PAAR motif TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 Gene3D G3DSA:3.90.930.1 553 708 4.0E-8 T 14-10-2018 TMO_a0098 128dfba3f5b99d519a28729d8a23ac5c 1489 SUPERFAMILY SSF69304 780 938 1.83E-6 T 14-10-2018 TMO_2111 87303a109a71109ae537fe840cf978a4 310 SUPERFAMILY SSF103481 213 308 3.79E-13 T 14-10-2018 TMO_2111 87303a109a71109ae537fe840cf978a4 310 SUPERFAMILY SSF103481 60 159 5.23E-14 T 14-10-2018 TMO_2111 87303a109a71109ae537fe840cf978a4 310 Pfam PF00892 EamA-like transporter family 25 157 1.4E-26 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_2111 87303a109a71109ae537fe840cf978a4 310 Pfam PF00892 EamA-like transporter family 172 306 6.9E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_b0598 7dab3b2b25f9841731e16fd435ebd4bb 772 SMART SM00869 501 762 5.0E-33 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_b0598 7dab3b2b25f9841731e16fd435ebd4bb 772 Gene3D G3DSA:2.40.128.130 472 772 2.7E-47 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_b0598 7dab3b2b25f9841731e16fd435ebd4bb 772 SUPERFAMILY SSF103515 447 772 1.31E-42 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_b0598 7dab3b2b25f9841731e16fd435ebd4bb 772 Pfam PF03797 Autotransporter beta-domain 504 752 2.4E-39 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_3232 fdcf8836ad3e8af54a008870395c2799 253 Gene3D G3DSA:3.20.20.70 9 251 4.6E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3232 fdcf8836ad3e8af54a008870395c2799 253 SUPERFAMILY SSF51366 9 246 1.95E-60 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TMO_3232 fdcf8836ad3e8af54a008870395c2799 253 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 12 240 5.1E-35 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_3232 fdcf8836ad3e8af54a008870395c2799 253 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 10 245 31.776 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_3232 fdcf8836ad3e8af54a008870395c2799 253 SMART SM00934 12 240 7.5E-73 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_3232 fdcf8836ad3e8af54a008870395c2799 253 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 66 79 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_3232 fdcf8836ad3e8af54a008870395c2799 253 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 13 240 6.3E-42 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TMO_c0835 687919f61ff8ff6d8e25890e28cbc353 164 Pfam PF07076 Protein of unknown function (DUF1344) 75 125 3.0E-6 T 14-10-2018 IPR009780 Protein of unknown function DUF1344 TMO_2054 9fb85f09199b94a1ade976e82c70567b 712 Gene3D G3DSA:2.40.128.130 407 712 5.8E-46 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_2054 9fb85f09199b94a1ade976e82c70567b 712 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 464 712 2.2E-21 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 TMO_2054 9fb85f09199b94a1ade976e82c70567b 712 Pfam PF03797 Autotransporter beta-domain 450 690 6.0E-40 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_2054 9fb85f09199b94a1ade976e82c70567b 712 SUPERFAMILY SSF103515 413 712 7.06E-37 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily TMO_2054 9fb85f09199b94a1ade976e82c70567b 712 SMART SM00869 434 701 1.3E-32 T 14-10-2018 IPR005546 Autotransporter beta-domain TMO_1443 f05282efa65f511581f0532de376f602 285 Gene3D G3DSA:3.40.50.1820 2 275 6.9E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1443 f05282efa65f511581f0532de376f602 285 Pfam PF12697 Alpha/beta hydrolase family 24 269 1.1E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_1443 f05282efa65f511581f0532de376f602 285 SUPERFAMILY SSF53474 4 275 4.12E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0800 90e450c3efabdd4a1329084dedf39013 437 Gene3D G3DSA:3.40.50.2300 163 395 9.1E-85 T 14-10-2018 TMO_0800 90e450c3efabdd4a1329084dedf39013 437 Gene3D G3DSA:3.40.50.2300 57 386 9.1E-85 T 14-10-2018 TMO_0800 90e450c3efabdd4a1329084dedf39013 437 Pfam PF13458 Periplasmic binding protein 35 393 5.9E-38 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_0800 90e450c3efabdd4a1329084dedf39013 437 SUPERFAMILY SSF53822 34 426 4.71E-54 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_2027 862252d86bc453bbf5c20cf1bebc59c9 384 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 32 84 6.4E-14 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_2027 862252d86bc453bbf5c20cf1bebc59c9 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 194 381 1.8E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2027 862252d86bc453bbf5c20cf1bebc59c9 384 Gene3D G3DSA:1.10.3720.10 165 379 1.4E-18 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2027 862252d86bc453bbf5c20cf1bebc59c9 384 SUPERFAMILY SSF161098 171 370 4.41E-22 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0612 9609dd5a2f0a0284eba01df41db06791 77 Pfam PF03621 MbtH-like protein 4 53 3.9E-22 T 14-10-2018 IPR005153 MbtH-like domain TMO_c0612 9609dd5a2f0a0284eba01df41db06791 77 SUPERFAMILY SSF160582 2 70 2.88E-28 T 14-10-2018 IPR038020 MbtH-like domain superfamily TMO_c0612 9609dd5a2f0a0284eba01df41db06791 77 Gene3D G3DSA:3.90.820.10 1 72 4.7E-31 T 14-10-2018 TMO_c0612 9609dd5a2f0a0284eba01df41db06791 77 SMART SM00923 1 53 1.4E-19 T 14-10-2018 IPR005153 MbtH-like domain TMO_3264 baba9ce24e3fee7f40c6223f2857ee30 275 SUPERFAMILY SSF56059 48 258 8.7E-34 T 14-10-2018 TMO_3264 baba9ce24e3fee7f40c6223f2857ee30 275 Pfam PF13549 ATP-grasp domain 42 255 6.1E-57 T 14-10-2018 TMO_3264 baba9ce24e3fee7f40c6223f2857ee30 275 Gene3D G3DSA:3.30.470.20 48 253 3.7E-69 T 14-10-2018 TMO_3264 baba9ce24e3fee7f40c6223f2857ee30 275 Gene3D G3DSA:3.30.1490.20 64 141 3.7E-69 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_1421 79bd7b019580ad73f4988cb296f741e6 282 SUPERFAMILY SSF52540 7 243 5.44E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1421 79bd7b019580ad73f4988cb296f741e6 282 SMART SM00382 36 235 8.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1421 79bd7b019580ad73f4988cb296f741e6 282 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1421 79bd7b019580ad73f4988cb296f741e6 282 Gene3D G3DSA:3.40.50.300 5 279 5.9E-78 T 14-10-2018 TMO_1421 79bd7b019580ad73f4988cb296f741e6 282 Pfam PF00005 ABC transporter 28 186 2.1E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1485 5b9e310e669a0871fd1b81cfeda070c2 222 PIRSF PIRSF000239 8 210 5.0E-66 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_1485 5b9e310e669a0871fd1b81cfeda070c2 222 SUPERFAMILY SSF52833 12 201 1.31E-58 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_1485 5b9e310e669a0871fd1b81cfeda070c2 222 Pfam PF00578 AhpC/TSA family 16 143 6.4E-30 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_1485 5b9e310e669a0871fd1b81cfeda070c2 222 Gene3D G3DSA:3.40.30.10 8 200 1.1E-60 T 14-10-2018 TMO_1485 5b9e310e669a0871fd1b81cfeda070c2 222 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 164 194 3.0E-8 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TMO_0416 6cce11fff801e091577e891f3ac61aa6 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 196 217 1.5E-9 T 14-10-2018 TMO_0416 6cce11fff801e091577e891f3ac61aa6 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 56 81 1.5E-9 T 14-10-2018 TMO_0416 6cce11fff801e091577e891f3ac61aa6 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 285 297 1.5E-9 T 14-10-2018 TMO_0416 6cce11fff801e091577e891f3ac61aa6 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 244 1.5E-9 T 14-10-2018 TMO_0416 6cce11fff801e091577e891f3ac61aa6 489 Pfam PF00361 Proton-conducting membrane transporter 107 324 3.8E-30 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2561 b657a3b74fd3e89776f8c7f09dde11c4 329 Gene3D G3DSA:3.30.420.40 126 316 1.9E-78 T 14-10-2018 TMO_2561 b657a3b74fd3e89776f8c7f09dde11c4 329 SUPERFAMILY SSF53067 6 326 1.39E-55 T 14-10-2018 TMO_2561 b657a3b74fd3e89776f8c7f09dde11c4 329 Pfam PF00480 ROK family 7 327 1.6E-66 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 TMO_2561 b657a3b74fd3e89776f8c7f09dde11c4 329 Gene3D G3DSA:3.30.420.40 8 323 1.9E-78 T 14-10-2018 TMO_2561 b657a3b74fd3e89776f8c7f09dde11c4 329 ProSitePatterns PS01125 ROK family signature. 137 164 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 TMO_d0037 d73d5543d222c6c179472b3e6e44c126 409 Gene3D G3DSA:3.50.50.60 123 247 6.7E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_d0037 d73d5543d222c6c179472b3e6e44c126 409 Pfam PF13450 NAD(P)-binding Rossmann-like domain 3 36 2.7E-7 T 14-10-2018 TMO_d0037 d73d5543d222c6c179472b3e6e44c126 409 SUPERFAMILY SSF51905 1 313 1.77E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_d0037 d73d5543d222c6c179472b3e6e44c126 409 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 203 291 3.1E-9 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_d0037 d73d5543d222c6c179472b3e6e44c126 409 Gene3D G3DSA:3.50.50.60 1 303 6.7E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_d0037 d73d5543d222c6c179472b3e6e44c126 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 6.2E-13 T 14-10-2018 TMO_d0037 d73d5543d222c6c179472b3e6e44c126 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 6.2E-13 T 14-10-2018 TMO_d0037 d73d5543d222c6c179472b3e6e44c126 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 1 14 6.2E-13 T 14-10-2018 TMO_d0037 d73d5543d222c6c179472b3e6e44c126 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 6.2E-13 T 14-10-2018 TMO_0835 05f64c38c2af8e0d41366c0c0de198cd 257 Gene3D G3DSA:1.10.357.10 42 220 5.7E-43 T 14-10-2018 TMO_0835 05f64c38c2af8e0d41366c0c0de198cd 257 Pfam PF08511 COQ9 149 224 1.9E-32 T 14-10-2018 IPR013718 COQ9 Reactome: R-HSA-2142789 TMO_0835 05f64c38c2af8e0d41366c0c0de198cd 257 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 47 228 9.0E-54 T 14-10-2018 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 Reactome: R-HSA-2142789 TMO_0529 b35f007c781e1e122cb4b68a3e361a46 451 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 20 427 8.2E-94 T 14-10-2018 TMO_0529 b35f007c781e1e122cb4b68a3e361a46 451 SUPERFAMILY SSF51338 5 433 1.57E-32 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_0529 b35f007c781e1e122cb4b68a3e361a46 451 ProSitePatterns PS00483 Dihydroorotase signature 2. 305 316 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TMO_0529 b35f007c781e1e122cb4b68a3e361a46 451 Gene3D G3DSA:3.20.20.140 58 366 2.4E-127 T 14-10-2018 TMO_0529 b35f007c781e1e122cb4b68a3e361a46 451 Pfam PF01979 Amidohydrolase family 55 423 8.0E-26 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_0529 b35f007c781e1e122cb4b68a3e361a46 451 SUPERFAMILY SSF51556 58 370 1.17E-93 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_0529 b35f007c781e1e122cb4b68a3e361a46 451 Gene3D G3DSA:2.30.40.10 8 431 2.4E-127 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2886 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 399 416 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_2886 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 SUPERFAMILY SSF53697 70 425 9.54E-87 T 14-10-2018 TMO_2886 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PRINTS PR00662 Glucose-6-phosphate isomerase signature 399 412 1.8E-14 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_2886 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PRINTS PR00662 Glucose-6-phosphate isomerase signature 186 204 1.8E-14 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_2886 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PRINTS PR00662 Glucose-6-phosphate isomerase signature 367 385 1.8E-14 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_2886 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PRINTS PR00662 Glucose-6-phosphate isomerase signature 263 284 1.8E-14 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_2886 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PRINTS PR00662 Glucose-6-phosphate isomerase signature 74 93 1.8E-14 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_2886 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 Gene3D G3DSA:3.40.50.10490 215 408 2.7E-104 T 14-10-2018 TMO_2886 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 Gene3D G3DSA:3.40.50.10490 59 214 2.7E-104 T 14-10-2018 TMO_2886 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 Pfam PF00342 Phosphoglucose isomerase 71 285 3.4E-17 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TMO_3253 0af629d9b6933d56e74e79e5dd7c26f1 205 Pfam PF00694 Aconitase C-terminal domain 1 123 3.5E-36 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 TMO_3253 0af629d9b6933d56e74e79e5dd7c26f1 205 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 187 1.5E-76 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 TMO_3253 0af629d9b6933d56e74e79e5dd7c26f1 205 Gene3D G3DSA:3.20.19.10 1 175 1.1E-71 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 TMO_3253 0af629d9b6933d56e74e79e5dd7c26f1 205 SUPERFAMILY SSF52016 1 193 3.92E-56 T 14-10-2018 TMO_3253 0af629d9b6933d56e74e79e5dd7c26f1 205 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 39.713 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 TMO_0493 9200fca7f1a9e4fa1ab2d595a137cdf3 177 Pfam PF07484 Phage Tail Collar Domain 7 62 4.2E-16 T 14-10-2018 IPR011083 Phage tail collar domain TMO_0493 9200fca7f1a9e4fa1ab2d595a137cdf3 177 Gene3D G3DSA:3.90.1340.10 7 59 3.8E-12 T 14-10-2018 IPR037053 Phage tail collar domain superfamily TMO_0493 9200fca7f1a9e4fa1ab2d595a137cdf3 177 Gene3D G3DSA:4.10.1070.10 60 113 3.8E-12 T 14-10-2018 TMO_0493 9200fca7f1a9e4fa1ab2d595a137cdf3 177 SUPERFAMILY SSF88874 1 172 1.7E-38 T 14-10-2018 TMO_c0017 fcc00571e625f44e496f256d9cd30378 165 SUPERFAMILY SSF52788 7 145 1.83E-38 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily TMO_c0017 fcc00571e625f44e496f256d9cd30378 165 SMART SM00226 7 145 7.3E-32 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TMO_c0017 fcc00571e625f44e496f256d9cd30378 165 Gene3D G3DSA:3.40.50.2300 6 145 7.7E-40 T 14-10-2018 TMO_c0017 fcc00571e625f44e496f256d9cd30378 165 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 10 133 5.5E-17 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TMO_1380 40c99c64c1ede5d2697f87ab59a5aceb 334 SUPERFAMILY SSF50129 7 149 7.46E-27 T 14-10-2018 IPR011032 GroES-like superfamily TMO_1380 40c99c64c1ede5d2697f87ab59a5aceb 334 Gene3D G3DSA:3.90.180.10 8 318 4.4E-75 T 14-10-2018 TMO_1380 40c99c64c1ede5d2697f87ab59a5aceb 334 SMART SM00829 16 331 1.1E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_1380 40c99c64c1ede5d2697f87ab59a5aceb 334 SUPERFAMILY SSF51735 118 298 3.52E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1380 40c99c64c1ede5d2697f87ab59a5aceb 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 92 7.1E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_1380 40c99c64c1ede5d2697f87ab59a5aceb 334 Gene3D G3DSA:3.40.50.720 126 301 4.4E-75 T 14-10-2018 TMO_3446 547b1e08c49fbb7d377fe868d4d0533c 537 Gene3D G3DSA:3.40.50.300 190 508 1.7E-48 T 14-10-2018 TMO_3446 547b1e08c49fbb7d377fe868d4d0533c 537 SMART SM00382 209 391 2.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3446 547b1e08c49fbb7d377fe868d4d0533c 537 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 507 2.0E-25 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain TMO_3446 547b1e08c49fbb7d377fe868d4d0533c 537 SUPERFAMILY SSF54211 9 169 6.83E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_3446 547b1e08c49fbb7d377fe868d4d0533c 537 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 389 6.2E-87 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain TMO_3446 547b1e08c49fbb7d377fe868d4d0533c 537 SUPERFAMILY SSF52540 189 509 1.21E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3446 547b1e08c49fbb7d377fe868d4d0533c 537 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 140 1.1E-35 T 14-10-2018 TMO_3446 547b1e08c49fbb7d377fe868d4d0533c 537 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 507 6.9E-148 T 14-10-2018 IPR004482 Mg chelatase-related protein TMO_c0852 1e48b7edf4b9bf80bedd0a8f2d85f9f2 335 SUPERFAMILY SSF52518 4 201 1.87E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_c0852 1e48b7edf4b9bf80bedd0a8f2d85f9f2 335 SMART SM00861 5 189 2.4E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_c0852 1e48b7edf4b9bf80bedd0a8f2d85f9f2 335 Pfam PF02780 Transketolase, C-terminal domain 204 325 1.2E-39 T 14-10-2018 IPR033248 Transketolase, C-terminal domain TMO_c0852 1e48b7edf4b9bf80bedd0a8f2d85f9f2 335 Gene3D G3DSA:3.40.50.970 1 201 3.4E-81 T 14-10-2018 TMO_c0852 1e48b7edf4b9bf80bedd0a8f2d85f9f2 335 SUPERFAMILY SSF52922 198 333 2.49E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_c0852 1e48b7edf4b9bf80bedd0a8f2d85f9f2 335 Gene3D G3DSA:3.40.50.920 202 334 8.3E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_c0852 1e48b7edf4b9bf80bedd0a8f2d85f9f2 335 Pfam PF02779 Transketolase, pyrimidine binding domain 4 189 4.2E-55 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_0944 f9010f57cb4abbf60bd4605a316d8ff7 182 Pfam PF07883 Cupin domain 108 175 6.3E-19 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_0944 f9010f57cb4abbf60bd4605a316d8ff7 182 Gene3D G3DSA:1.10.260.40 2 67 2.0E-15 T 14-10-2018 TMO_0944 f9010f57cb4abbf60bd4605a316d8ff7 182 SUPERFAMILY SSF47413 4 66 2.11E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0944 f9010f57cb4abbf60bd4605a316d8ff7 182 Gene3D G3DSA:2.60.120.10 68 181 4.3E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_0944 f9010f57cb4abbf60bd4605a316d8ff7 182 SUPERFAMILY SSF51182 48 181 1.64E-26 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_0944 f9010f57cb4abbf60bd4605a316d8ff7 182 Pfam PF01381 Helix-turn-helix 9 63 6.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_0944 f9010f57cb4abbf60bd4605a316d8ff7 182 SMART SM00530 8 63 3.7E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0196 5a447d62fddf46313ee79e1f217d3a94 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 269 8.4E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0196 5a447d62fddf46313ee79e1f217d3a94 273 Gene3D G3DSA:1.10.3720.10 75 271 3.8E-20 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0196 5a447d62fddf46313ee79e1f217d3a94 273 SUPERFAMILY SSF161098 76 262 4.19E-28 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1860 e7662b0c4dcccaf597915973474ba104 281 SMART SM00382 30 214 2.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1860 e7662b0c4dcccaf597915973474ba104 281 Pfam PF00005 ABC transporter 21 167 4.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1860 e7662b0c4dcccaf597915973474ba104 281 SUPERFAMILY SSF52540 5 228 2.81E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1860 e7662b0c4dcccaf597915973474ba104 281 Gene3D G3DSA:3.40.50.300 1 247 6.5E-64 T 14-10-2018 TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 6.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 6.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 248 1.5E-61 T 14-10-2018 TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 SUPERFAMILY SSF51735 11 250 9.23E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 7.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 Gene3D G3DSA:3.40.50.720 2 250 1.2E-80 T 14-10-2018 TMO_b0167 bb694c539e150f4cfbd5f2c4cf9b5744 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 186 0.0017 T 14-10-2018 TMO_1786 e8dcf6ea081ac5cd986188a8d427a32d 300 SUPERFAMILY SSF53850 95 291 4.71E-26 T 14-10-2018 TMO_1786 e8dcf6ea081ac5cd986188a8d427a32d 300 Gene3D G3DSA:3.40.190.290 96 287 3.3E-22 T 14-10-2018 TMO_1786 e8dcf6ea081ac5cd986188a8d427a32d 300 SUPERFAMILY SSF46785 7 117 3.33E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1786 e8dcf6ea081ac5cd986188a8d427a32d 300 Gene3D G3DSA:1.10.10.10 3 89 7.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1786 e8dcf6ea081ac5cd986188a8d427a32d 300 Pfam PF03466 LysR substrate binding domain 94 288 4.8E-23 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1786 e8dcf6ea081ac5cd986188a8d427a32d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 9.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1786 e8dcf6ea081ac5cd986188a8d427a32d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 9.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1786 e8dcf6ea081ac5cd986188a8d427a32d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 9.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1786 e8dcf6ea081ac5cd986188a8d427a32d 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 4.0E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1435 48939b32cf287492b59d5919429c514d 264 Gene3D G3DSA:3.40.50.1820 33 262 2.7E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1435 48939b32cf287492b59d5919429c514d 264 Pfam PF00975 Thioesterase domain 35 258 1.3E-34 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 TMO_1435 48939b32cf287492b59d5919429c514d 264 SUPERFAMILY SSF53474 16 258 1.31E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1504 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 557 4.1E-220 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_1504 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_1504 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 SUPERFAMILY SSF143975 4 378 4.58E-131 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_1504 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 SUPERFAMILY SSF52016 380 557 2.04E-57 T 14-10-2018 TMO_1504 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 Gene3D G3DSA:3.50.30.80 379 528 1.9E-51 T 14-10-2018 TMO_1504 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_1504 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 Pfam PF00920 Dehydratase family 35 554 5.5E-203 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_1504 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 5 557 43.583 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_2563 a450fac1411c18a963ce9f1330fb1253 142 Pfam PF03061 Thioesterase superfamily 54 129 1.4E-11 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_2563 a450fac1411c18a963ce9f1330fb1253 142 Gene3D G3DSA:3.10.129.10 11 142 6.7E-46 T 14-10-2018 TMO_2563 a450fac1411c18a963ce9f1330fb1253 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 137 6.6E-14 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_2563 a450fac1411c18a963ce9f1330fb1253 142 SUPERFAMILY SSF54637 7 140 3.49E-29 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_c0822 3eeb8e91cf0e63bcd01d94286d2e0c57 534 SUPERFAMILY SSF51905 20 228 6.91E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0822 3eeb8e91cf0e63bcd01d94286d2e0c57 534 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 44 68 4.6E-18 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_c0822 3eeb8e91cf0e63bcd01d94286d2e0c57 534 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 335 362 4.6E-18 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_c0822 3eeb8e91cf0e63bcd01d94286d2e0c57 534 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 20 36 4.6E-18 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_c0822 3eeb8e91cf0e63bcd01d94286d2e0c57 534 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 145 161 4.6E-18 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_c0822 3eeb8e91cf0e63bcd01d94286d2e0c57 534 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 403 416 4.6E-18 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_c0822 3eeb8e91cf0e63bcd01d94286d2e0c57 534 PIRSF PIRSF000332 18 235 1.5E-31 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_c0822 3eeb8e91cf0e63bcd01d94286d2e0c57 534 PIRSF PIRSF000332 247 504 7.9E-13 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_c0822 3eeb8e91cf0e63bcd01d94286d2e0c57 534 Pfam PF00743 Flavin-binding monooxygenase-like 300 494 1.9E-11 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_c0822 3eeb8e91cf0e63bcd01d94286d2e0c57 534 Pfam PF00743 Flavin-binding monooxygenase-like 19 224 9.2E-29 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_1370 5ca80966e38cf354cb318c9ed11f6782 224 Gene3D G3DSA:3.40.50.1000 9 206 1.0E-51 T 14-10-2018 IPR023214 HAD superfamily TMO_1370 5ca80966e38cf354cb318c9ed11f6782 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 2.7E-22 T 14-10-2018 TMO_1370 5ca80966e38cf354cb318c9ed11f6782 224 SUPERFAMILY SSF56784 8 218 1.21E-47 T 14-10-2018 IPR036412 HAD-like superfamily TMO_1370 5ca80966e38cf354cb318c9ed11f6782 224 Gene3D G3DSA:1.10.150.240 21 86 1.0E-51 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 Pfam PF12729 Four helix bundle sensory module for signal transduction 11 183 6.2E-15 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 Pfam PF00672 HAMP domain 219 258 5.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 SMART SM00304 217 270 2.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 Gene3D G3DSA:1.10.287.950 276 563 1.6E-55 T 14-10-2018 TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 SMART SM00397 458 525 0.0028 T 14-10-2018 IPR000727 Target SNARE coiled-coil homology domain TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 SUPERFAMILY SSF58104 237 560 1.44E-60 T 14-10-2018 TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 SMART SM00283 307 561 4.9E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 Gene3D G3DSA:1.20.1480.50 177 275 3.3E-13 T 14-10-2018 TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 531 1.1E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 482 511 8.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 432 8.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 8.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_0221 bcd82714ff49a2458e07f3eb17dcb240 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 357 8.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_1034 09a06a72367018d782259370c22dec89 412 SUPERFAMILY SSF103473 23 401 6.28E-20 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_1034 09a06a72367018d782259370c22dec89 412 Gene3D G3DSA:1.20.1250.20 224 401 2.2E-8 T 14-10-2018 TMO_1034 09a06a72367018d782259370c22dec89 412 Gene3D G3DSA:1.20.1250.20 17 205 1.3E-7 T 14-10-2018 TMO_1761 549c547ffa1bc691c6e5f016731c5b6f 165 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 3 159 36.551 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1761 549c547ffa1bc691c6e5f016731c5b6f 165 Pfam PF01967 MoaC family 16 151 2.5E-53 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1761 549c547ffa1bc691c6e5f016731c5b6f 165 Gene3D G3DSA:3.30.70.640 2 162 1.7E-65 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1761 549c547ffa1bc691c6e5f016731c5b6f 165 SUPERFAMILY SSF55040 12 156 5.62E-59 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_1761 549c547ffa1bc691c6e5f016731c5b6f 165 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 5 153 5.3E-61 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TMO_2438 1c10d84dede12e046aff0be3f99ee9c5 156 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 7 132 3.1E-18 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_1160 a119c65996fd491ec8ad356190b1c35b 257 Pfam PF00455 DeoR C terminal sensor domain 75 236 1.6E-40 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain TMO_1160 a119c65996fd491ec8ad356190b1c35b 257 SUPERFAMILY SSF100950 76 237 2.18E-26 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_1160 a119c65996fd491ec8ad356190b1c35b 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 1.2E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_1160 a119c65996fd491ec8ad356190b1c35b 257 SMART SM00420 6 58 3.0E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_1160 a119c65996fd491ec8ad356190b1c35b 257 SMART SM01134 72 237 3.5E-49 T 14-10-2018 TMO_1160 a119c65996fd491ec8ad356190b1c35b 257 SUPERFAMILY SSF46785 4 65 3.1E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1160 a119c65996fd491ec8ad356190b1c35b 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.0E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_1160 a119c65996fd491ec8ad356190b1c35b 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.0E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_1160 a119c65996fd491ec8ad356190b1c35b 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 Gene3D G3DSA:2.40.30.20 2 94 3.1E-38 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 SUPERFAMILY SSF52540 97 379 4.98E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 510 51.739 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 PIRSF PIRSF039088 2 511 5.1E-281 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 510 5.0E-254 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 Gene3D G3DSA:3.40.50.300 95 380 8.7E-134 T 14-10-2018 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 SUPERFAMILY SSF47917 381 509 7.06E-47 T 14-10-2018 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 SUPERFAMILY SSF50615 11 95 1.96E-29 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 373 6.9E-74 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 380 503 9.2E-49 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 Gene3D G3DSA:1.20.150.20 381 511 3.3E-53 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 1.4E-17 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_2987 b00c619826c9d85ead24f6b2cbceb0cb 511 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TMO_b0307 86432f0abb6c0c09fff144989633399a 285 SUPERFAMILY SSF54637 136 282 1.02E-17 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_b0307 86432f0abb6c0c09fff144989633399a 285 Pfam PF13622 Thioesterase-like superfamily 32 282 3.9E-38 T 14-10-2018 TMO_b0307 86432f0abb6c0c09fff144989633399a 285 SUPERFAMILY SSF54637 43 131 1.63E-10 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_b0307 86432f0abb6c0c09fff144989633399a 285 Gene3D G3DSA:3.10.129.90 14 285 1.0E-73 T 14-10-2018 TMO_1181 4a6e4dce137e393cd359f97568b3c462 302 SUPERFAMILY SSF161098 95 282 8.9E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1181 4a6e4dce137e393cd359f97568b3c462 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 296 5.5E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1181 4a6e4dce137e393cd359f97568b3c462 302 Gene3D G3DSA:1.10.3720.10 90 297 7.8E-15 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0010 32460509e75aa8636cec0a8b5e4c584b 270 SUPERFAMILY SSF51126 40 218 6.36E-7 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor TMO_b0010 32460509e75aa8636cec0a8b5e4c584b 270 Gene3D G3DSA:2.160.20.10 48 268 1.3E-6 T 14-10-2018 IPR012334 Pectin lyase fold TMO_c0887 e315da1cec4d825ae5d0301c48066e64 308 SUPERFAMILY SSF46785 3 84 3.61E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0887 e315da1cec4d825ae5d0301c48066e64 308 Pfam PF03466 LysR substrate binding domain 86 289 1.7E-28 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0887 e315da1cec4d825ae5d0301c48066e64 308 Gene3D G3DSA:1.10.10.10 1 82 3.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0887 e315da1cec4d825ae5d0301c48066e64 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0887 e315da1cec4d825ae5d0301c48066e64 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0887 e315da1cec4d825ae5d0301c48066e64 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0887 e315da1cec4d825ae5d0301c48066e64 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0887 e315da1cec4d825ae5d0301c48066e64 308 SUPERFAMILY SSF53850 87 291 4.16E-31 T 14-10-2018 TMO_c0887 e315da1cec4d825ae5d0301c48066e64 308 Gene3D G3DSA:3.40.190.290 89 292 8.3E-32 T 14-10-2018 TMO_3499 8f5addf40a0945609c3ff1aed3376bcc 406 Gene3D G3DSA:3.40.50.2300 53 360 7.0E-103 T 14-10-2018 TMO_3499 8f5addf40a0945609c3ff1aed3376bcc 406 Gene3D G3DSA:3.40.50.2300 148 367 7.0E-103 T 14-10-2018 TMO_3499 8f5addf40a0945609c3ff1aed3376bcc 406 SUPERFAMILY SSF53822 30 402 1.04E-82 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_3499 8f5addf40a0945609c3ff1aed3376bcc 406 Pfam PF13458 Periplasmic binding protein 30 367 1.7E-82 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_c0244 10a6c9f41472a73244f18b24fd34123c 362 Pfam PF00953 Glycosyl transferase family 4 101 286 5.6E-36 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 TMO_c0244 10a6c9f41472a73244f18b24fd34123c 362 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 70 82 3.2E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_c0244 10a6c9f41472a73244f18b24fd34123c 362 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 360 25.512 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_c0244 10a6c9f41472a73244f18b24fd34123c 362 ProSitePatterns PS01348 MraY family signature 2. 191 202 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_c0244 10a6c9f41472a73244f18b24fd34123c 362 ProSitePatterns PS01347 MraY family signature 1. 70 82 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_c0244 10a6c9f41472a73244f18b24fd34123c 362 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 362 2.2E-126 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_3512 7b1ae036267faefdb5abab00cb99d72f 330 SUPERFAMILY SSF52374 2 327 2.34E-97 T 14-10-2018 TMO_3512 7b1ae036267faefdb5abab00cb99d72f 330 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 327 3.4E-101 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TMO_3512 7b1ae036267faefdb5abab00cb99d72f 330 Gene3D G3DSA:3.40.50.620 4 326 4.1E-138 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_3512 7b1ae036267faefdb5abab00cb99d72f 330 Gene3D G3DSA:1.10.240.10 185 295 4.1E-138 T 14-10-2018 TMO_3512 7b1ae036267faefdb5abab00cb99d72f 330 Pfam PF00579 tRNA synthetases class I (W and Y) 3 265 2.2E-80 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_3512 7b1ae036267faefdb5abab00cb99d72f 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 4.8E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TMO_3512 7b1ae036267faefdb5abab00cb99d72f 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 4.8E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TMO_3512 7b1ae036267faefdb5abab00cb99d72f 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 4.8E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TMO_3512 7b1ae036267faefdb5abab00cb99d72f 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 4.8E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TMO_3512 7b1ae036267faefdb5abab00cb99d72f 330 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 328 40.374 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 TMO_3512 7b1ae036267faefdb5abab00cb99d72f 330 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_a0405 032cc073a710bb3ec932b7bdfdf80889 292 SUPERFAMILY SSF51621 3 283 2.78E-88 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_a0405 032cc073a710bb3ec932b7bdfdf80889 292 Pfam PF13714 Phosphoenolpyruvate phosphomutase 5 246 1.5E-51 T 14-10-2018 TMO_a0405 032cc073a710bb3ec932b7bdfdf80889 292 Gene3D G3DSA:3.20.20.60 1 283 1.0E-97 T 14-10-2018 TMO_a0405 032cc073a710bb3ec932b7bdfdf80889 292 ProSitePatterns PS00161 Isocitrate lyase signature. 113 118 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 TMO_2981 4628e9c9f10c9a086450c8cc88836df4 373 SMART SM00382 25 212 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2981 4628e9c9f10c9a086450c8cc88836df4 373 Pfam PF03459 TOBE domain 303 367 8.7E-11 T 14-10-2018 IPR005116 Transport-associated OB, type 1 TMO_2981 4628e9c9f10c9a086450c8cc88836df4 373 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 371 1.8E-115 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 TMO_2981 4628e9c9f10c9a086450c8cc88836df4 373 SUPERFAMILY SSF50331 250 370 3.64E-13 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_2981 4628e9c9f10c9a086450c8cc88836df4 373 Pfam PF00005 ABC transporter 18 162 1.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2981 4628e9c9f10c9a086450c8cc88836df4 373 Gene3D G3DSA:3.40.50.300 9 234 2.6E-61 T 14-10-2018 TMO_2981 4628e9c9f10c9a086450c8cc88836df4 373 SUPERFAMILY SSF52540 14 232 2.13E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2981 4628e9c9f10c9a086450c8cc88836df4 373 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2981 4628e9c9f10c9a086450c8cc88836df4 373 Gene3D G3DSA:2.40.50.100 301 371 1.5E-15 T 14-10-2018 TMO_3229 d7be0c5aa1d7f64098ec57fafcfbea5c 318 Gene3D G3DSA:3.90.226.10 65 257 1.3E-54 T 14-10-2018 TMO_3229 d7be0c5aa1d7f64098ec57fafcfbea5c 318 SUPERFAMILY SSF52096 45 250 9.56E-34 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_3229 d7be0c5aa1d7f64098ec57fafcfbea5c 318 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 58 259 1.2E-52 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 TMO_3229 d7be0c5aa1d7f64098ec57fafcfbea5c 318 Gene3D G3DSA:3.40.1750.20 154 220 1.3E-54 T 14-10-2018 TMO_3229 d7be0c5aa1d7f64098ec57fafcfbea5c 318 Pfam PF01343 Peptidase family S49 114 264 2.4E-37 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 TMO_0558 80dc8f4d0569545fe01d4246d12e3fe0 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 366 5.0E-84 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_0558 80dc8f4d0569545fe01d4246d12e3fe0 440 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 19 366 8.8E-94 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0558 80dc8f4d0569545fe01d4246d12e3fe0 440 PIRSF PIRSF006066 3 367 4.1E-101 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_c0709 ce6259d26cb24ee9af501052e76595bf 228 Gene3D G3DSA:1.10.150.240 18 84 3.1E-47 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TMO_c0709 ce6259d26cb24ee9af501052e76595bf 228 Gene3D G3DSA:3.40.50.1000 6 191 3.1E-47 T 14-10-2018 IPR023214 HAD superfamily TMO_c0709 ce6259d26cb24ee9af501052e76595bf 228 SUPERFAMILY SSF56784 4 211 3.8E-46 T 14-10-2018 IPR036412 HAD-like superfamily TMO_c0709 ce6259d26cb24ee9af501052e76595bf 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 7.3E-25 T 14-10-2018 TMO_0844 1faae6f0f776ae76e4b3baeabc2d4f28 55 Pfam PF04325 Protein of unknown function (DUF465) 9 53 9.9E-12 T 14-10-2018 IPR007420 Protein of unknown function DUF465 TMO_b0422 8ff44004c2506549f71eba52d2158540 248 Pfam PF07729 FCD domain 95 222 3.0E-17 T 14-10-2018 IPR011711 GntR, C-terminal TMO_b0422 8ff44004c2506549f71eba52d2158540 248 Gene3D G3DSA:1.10.10.10 14 85 1.4E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0422 8ff44004c2506549f71eba52d2158540 248 SMART SM00345 26 84 3.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0422 8ff44004c2506549f71eba52d2158540 248 Gene3D G3DSA:1.20.120.530 88 237 1.6E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0422 8ff44004c2506549f71eba52d2158540 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 7.5E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0422 8ff44004c2506549f71eba52d2158540 248 SUPERFAMILY SSF48008 91 228 3.66E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0422 8ff44004c2506549f71eba52d2158540 248 SUPERFAMILY SSF46785 19 88 2.34E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0422 8ff44004c2506549f71eba52d2158540 248 SMART SM00895 94 223 1.6E-12 T 14-10-2018 IPR011711 GntR, C-terminal TMO_b0297 5fd49973a07a37375119464c246b485f 99 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 5 76 4.3E-17 T 14-10-2018 IPR022789 Antitoxin ParD TMO_b0297 5fd49973a07a37375119464c246b485f 99 Gene3D G3DSA:1.10.8.1250 9 87 3.4E-21 T 14-10-2018 IPR038296 Antitoxin ParD superfamily TMO_b0297 5fd49973a07a37375119464c246b485f 99 SUPERFAMILY SSF47598 1 42 2.11E-10 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_b0297 5fd49973a07a37375119464c246b485f 99 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 74 4.3E-23 T 14-10-2018 IPR022789 Antitoxin ParD TMO_3062 9eb7ffd1bfaa17a677ec146b35a80ca2 265 Pfam PF00005 ABC transporter 23 185 2.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3062 9eb7ffd1bfaa17a677ec146b35a80ca2 265 SUPERFAMILY SSF52540 6 257 2.02E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3062 9eb7ffd1bfaa17a677ec146b35a80ca2 265 Gene3D G3DSA:3.40.50.300 1 263 5.3E-64 T 14-10-2018 TMO_3062 9eb7ffd1bfaa17a677ec146b35a80ca2 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 256 1.3E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_3062 9eb7ffd1bfaa17a677ec146b35a80ca2 265 SMART SM00382 32 242 1.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2754 da6b3a400ff54dfc5d00ac6c05db0a7d 426 SUPERFAMILY SSF88946 13 95 1.06E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_2754 da6b3a400ff54dfc5d00ac6c05db0a7d 426 Pfam PF08281 Sigma-70, region 4 128 176 1.5E-7 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_2754 da6b3a400ff54dfc5d00ac6c05db0a7d 426 Pfam PF04542 Sigma-70 region 2 21 85 5.1E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_2754 da6b3a400ff54dfc5d00ac6c05db0a7d 426 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 177 4.0E-13 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_2754 da6b3a400ff54dfc5d00ac6c05db0a7d 426 Gene3D G3DSA:1.10.1740.10 7 82 3.7E-8 T 14-10-2018 TMO_2754 da6b3a400ff54dfc5d00ac6c05db0a7d 426 SUPERFAMILY SSF88659 117 176 4.14E-8 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_b0563 2beb12e939016c81c72c68eb2f1d7cc1 97 Pfam PF03795 YCII-related domain 1 80 2.0E-7 T 14-10-2018 IPR005545 YCII-related TMO_b0563 2beb12e939016c81c72c68eb2f1d7cc1 97 SUPERFAMILY SSF54909 1 81 1.61E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_2818 1e42fd49d8e58f0dd911f3aa747ec922 279 Pfam PF05853 beta-keto acid cleavage enzyme 1 278 2.5E-64 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 TMO_2818 1e42fd49d8e58f0dd911f3aa747ec922 279 Gene3D G3DSA:3.20.20.70 1 279 9.4E-70 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_c0241 0a49058de10efacdb3e46fe2009b3f29 407 Gene3D G3DSA:3.40.50.2000 14 361 8.5E-90 T 14-10-2018 TMO_c0241 0a49058de10efacdb3e46fe2009b3f29 407 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 196 363 1.0E-32 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 TMO_c0241 0a49058de10efacdb3e46fe2009b3f29 407 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 13 371 31.61 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_c0241 0a49058de10efacdb3e46fe2009b3f29 407 Gene3D G3DSA:3.40.50.2000 173 355 8.5E-90 T 14-10-2018 TMO_c0241 0a49058de10efacdb3e46fe2009b3f29 407 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 13 145 4.5E-30 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_c0241 0a49058de10efacdb3e46fe2009b3f29 407 SUPERFAMILY SSF53756 12 371 1.76E-95 T 14-10-2018 TMO_c0241 0a49058de10efacdb3e46fe2009b3f29 407 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 9 366 5.6E-82 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_3437 12d8e24ed5bf84c6223db4306d570bfe 139 SUPERFAMILY SSF55620 1 130 9.45E-28 T 14-10-2018 TMO_3437 12d8e24ed5bf84c6223db4306d570bfe 139 Gene3D G3DSA:3.30.479.10 1 130 3.5E-26 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 TMO_3437 12d8e24ed5bf84c6223db4306d570bfe 139 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 129 1.1E-20 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 TMO_1903 87d8cbab5148d18ce3367a86f8826b8c 285 SUPERFAMILY SSF51690 118 284 2.24E-56 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 TMO_1903 87d8cbab5148d18ce3367a86f8826b8c 285 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 18 284 8.1E-95 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 TMO_1903 87d8cbab5148d18ce3367a86f8826b8c 285 PIRSF PIRSF006250 11 285 2.9E-90 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 TMO_1903 87d8cbab5148d18ce3367a86f8826b8c 285 Gene3D G3DSA:3.20.20.70 132 274 1.6E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1903 87d8cbab5148d18ce3367a86f8826b8c 285 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 118 283 1.3E-59 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 TMO_1903 87d8cbab5148d18ce3367a86f8826b8c 285 SUPERFAMILY SSF54675 8 117 6.9E-31 T 14-10-2018 TMO_1903 87d8cbab5148d18ce3367a86f8826b8c 285 Gene3D G3DSA:3.90.1170.20 21 282 1.6E-98 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 TMO_1903 87d8cbab5148d18ce3367a86f8826b8c 285 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 29 115 4.6E-23 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 TMO_b0198 846c2926a522419bf85b91e48fd6bbef 231 Gene3D G3DSA:3.40.50.850 11 230 2.0E-53 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_b0198 846c2926a522419bf85b91e48fd6bbef 231 Pfam PF00857 Isochorismatase family 32 219 2.6E-39 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_b0198 846c2926a522419bf85b91e48fd6bbef 231 SUPERFAMILY SSF52499 19 226 3.53E-50 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_1493 47ce86c41d7a25b6d5e64891f9938d01 226 SUPERFAMILY SSF46689 23 92 3.33E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1493 47ce86c41d7a25b6d5e64891f9938d01 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 74 1.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1493 47ce86c41d7a25b6d5e64891f9938d01 226 Gene3D G3DSA:1.10.357.10 27 214 1.2E-70 T 14-10-2018 TMO_1493 47ce86c41d7a25b6d5e64891f9938d01 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 45 1.8E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1493 47ce86c41d7a25b6d5e64891f9938d01 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 53 76 1.8E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1493 47ce86c41d7a25b6d5e64891f9938d01 226 Pfam PF16925 Bacterial transcriptional repressor C-terminal 100 213 1.2E-48 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_1493 47ce86c41d7a25b6d5e64891f9938d01 226 SUPERFAMILY SSF48498 100 213 6.99E-29 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_0638 517b613d80fb44315107f3a97a92af56 153 Pfam PF01575 MaoC like domain 12 116 8.1E-22 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_0638 517b613d80fb44315107f3a97a92af56 153 Gene3D G3DSA:3.10.129.10 1 150 5.9E-48 T 14-10-2018 TMO_0638 517b613d80fb44315107f3a97a92af56 153 SUPERFAMILY SSF54637 8 147 1.57E-34 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_1651 670cd4cc83e6a56369f00e1d68a2d772 96 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 40 92 2.2E-11 T 14-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter TMO_1651 670cd4cc83e6a56369f00e1d68a2d772 96 TIGRFAM TIGR02230 ATPase_gene1: putative F0F1-ATPase subunit 7 95 6.0E-15 T 14-10-2018 IPR011744 F0F1-ATPase subunit, putative TMO_b0047 3097b8557aadb90ff5820dc9c962586b 484 ProSitePatterns PS00571 Amidases signature. 154 185 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TMO_b0047 3097b8557aadb90ff5820dc9c962586b 484 Gene3D G3DSA:3.90.1300.10 4 483 1.3E-137 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0047 3097b8557aadb90ff5820dc9c962586b 484 SUPERFAMILY SSF75304 7 469 2.49E-111 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0047 3097b8557aadb90ff5820dc9c962586b 484 Pfam PF01425 Amidase 28 459 1.9E-92 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1213 344c9558629b902742c539ad88210282 170 Pfam PF12833 Helix-turn-helix domain 89 169 2.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_1213 344c9558629b902742c539ad88210282 170 SMART SM00342 83 168 9.0E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_1213 344c9558629b902742c539ad88210282 170 Gene3D G3DSA:1.10.10.60 67 170 6.9E-31 T 14-10-2018 TMO_1213 344c9558629b902742c539ad88210282 170 SUPERFAMILY SSF46689 67 117 8.56E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1213 344c9558629b902742c539ad88210282 170 SUPERFAMILY SSF46689 119 169 2.42E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0745 fecc40b3ff739c27d4c1a4be5249c92a 125 Gene3D G3DSA:3.40.30.10 3 123 5.9E-31 T 14-10-2018 TMO_0745 fecc40b3ff739c27d4c1a4be5249c92a 125 Pfam PF03960 ArsC family 54 117 4.7E-6 T 14-10-2018 IPR006660 Arsenate reductase-like TMO_0745 fecc40b3ff739c27d4c1a4be5249c92a 125 SUPERFAMILY SSF52833 5 118 1.87E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_0667 451fa40c31648c51db4a45a7134c33e3 291 SUPERFAMILY SSF53335 59 197 1.41E-7 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0667 451fa40c31648c51db4a45a7134c33e3 291 Pfam PF13578 Methyltransferase domain 63 180 2.8E-10 T 14-10-2018 TMO_0667 451fa40c31648c51db4a45a7134c33e3 291 Gene3D G3DSA:3.40.50.150 20 202 1.3E-10 T 14-10-2018 TMO_d0071 b3add913b2d197b5afa341dcd55c974d 198 SUPERFAMILY SSF48452 21 194 5.31E-65 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_d0071 b3add913b2d197b5afa341dcd55c974d 198 Gene3D G3DSA:1.20.58.320 17 97 2.8E-23 T 14-10-2018 TMO_d0071 b3add913b2d197b5afa341dcd55c974d 198 Gene3D G3DSA:1.25.40.10 98 198 5.0E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_d0071 b3add913b2d197b5afa341dcd55c974d 198 Pfam PF06041 Bacterial protein of unknown function (DUF924) 25 195 3.7E-57 T 14-10-2018 IPR010323 Protein of unknown function DUF924 TMO_3489 bfd59d3eaa83ef9de31402a07747edf0 340 SUPERFAMILY SSF53850 40 332 5.93E-57 T 14-10-2018 TMO_3489 bfd59d3eaa83ef9de31402a07747edf0 340 Gene3D G3DSA:3.40.190.10 52 298 2.8E-54 T 14-10-2018 TMO_3489 bfd59d3eaa83ef9de31402a07747edf0 340 Gene3D G3DSA:3.40.190.10 132 251 2.8E-54 T 14-10-2018 TMO_3489 bfd59d3eaa83ef9de31402a07747edf0 340 Pfam PF13343 Bacterial extracellular solute-binding protein 79 308 3.0E-46 T 14-10-2018 TMO_1484 e1a0c8bdc052a3f9f6dafc6d11a65695 133 Gene3D G3DSA:1.10.10.10 1 93 3.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1484 e1a0c8bdc052a3f9f6dafc6d11a65695 133 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 1.8E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_1484 e1a0c8bdc052a3f9f6dafc6d11a65695 133 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 1.8E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_1484 e1a0c8bdc052a3f9f6dafc6d11a65695 133 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 1.8E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_1484 e1a0c8bdc052a3f9f6dafc6d11a65695 133 SUPERFAMILY SSF46785 5 91 3.37E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1484 e1a0c8bdc052a3f9f6dafc6d11a65695 133 Pfam PF12840 Helix-turn-helix domain 14 71 2.3E-10 T 14-10-2018 TMO_1484 e1a0c8bdc052a3f9f6dafc6d11a65695 133 SMART SM00418 13 91 1.4E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_3206 ebed725f2ba0b8c689dfd98cabb25c69 252 Pfam PF13787 Protein of unknown function with HXXEE motif 54 169 2.0E-20 T 14-10-2018 IPR025671 Protein of unknown function with HXXEE motif TMO_0316 deaae4b0d27d7ada8508505ac56df3b5 305 SUPERFAMILY SSF103481 194 291 7.59E-11 T 14-10-2018 TMO_0316 deaae4b0d27d7ada8508505ac56df3b5 305 Pfam PF00892 EamA-like transporter family 20 145 1.5E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_0316 deaae4b0d27d7ada8508505ac56df3b5 305 Pfam PF00892 EamA-like transporter family 157 290 5.9E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_0316 deaae4b0d27d7ada8508505ac56df3b5 305 SUPERFAMILY SSF103481 46 148 1.7E-12 T 14-10-2018 TMO_2112 d3a640c85257b32a608168d3c54451c8 379 Gene3D G3DSA:3.40.1090.10 32 119 3.2E-12 T 14-10-2018 TMO_2112 d3a640c85257b32a608168d3c54451c8 379 Gene3D G3DSA:3.40.1090.10 149 298 2.7E-14 T 14-10-2018 TMO_2112 d3a640c85257b32a608168d3c54451c8 379 Pfam PF01734 Patatin-like phospholipase 50 243 9.8E-19 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TMO_2112 d3a640c85257b32a608168d3c54451c8 379 SUPERFAMILY SSF52151 48 359 4.19E-48 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TMO_c0418 eb24e2ba8b2948e01608a90bc1a1f6c8 336 Gene3D G3DSA:1.10.10.10 18 93 1.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0418 eb24e2ba8b2948e01608a90bc1a1f6c8 336 Pfam PF00891 O-methyltransferase 171 318 6.5E-10 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 TMO_c0418 eb24e2ba8b2948e01608a90bc1a1f6c8 336 Pfam PF16864 Dimerisation domain 21 99 1.7E-7 T 14-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain TMO_c0418 eb24e2ba8b2948e01608a90bc1a1f6c8 336 SUPERFAMILY SSF53335 146 320 5.83E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0418 eb24e2ba8b2948e01608a90bc1a1f6c8 336 SUPERFAMILY SSF46785 20 97 2.26E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0418 eb24e2ba8b2948e01608a90bc1a1f6c8 336 Gene3D G3DSA:3.40.50.150 133 325 9.5E-30 T 14-10-2018 TMO_0217 1d67b7baeb1570a00e1cfb7d3e478d14 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 2.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_0217 1d67b7baeb1570a00e1cfb7d3e478d14 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 2.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_0217 1d67b7baeb1570a00e1cfb7d3e478d14 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 2.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_0217 1d67b7baeb1570a00e1cfb7d3e478d14 153 Gene3D G3DSA:1.10.10.10 2 59 6.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0217 1d67b7baeb1570a00e1cfb7d3e478d14 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 6.3E-15 T 14-10-2018 TMO_0217 1d67b7baeb1570a00e1cfb7d3e478d14 153 SUPERFAMILY SSF46785 3 94 2.73E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0217 1d67b7baeb1570a00e1cfb7d3e478d14 153 Gene3D G3DSA:3.30.70.920 60 142 1.2E-23 T 14-10-2018 TMO_0217 1d67b7baeb1570a00e1cfb7d3e478d14 153 SMART SM00344 5 114 1.9E-40 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_0217 1d67b7baeb1570a00e1cfb7d3e478d14 153 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 7.3E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_0217 1d67b7baeb1570a00e1cfb7d3e478d14 153 SUPERFAMILY SSF54909 67 150 5.9E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_3274 78969122d1ff37cb3febdfc6bdf30720 126 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 119 7.7E-28 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 TMO_3274 78969122d1ff37cb3febdfc6bdf30720 126 Gene3D G3DSA:1.20.1300.10 11 121 7.5E-29 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3274 78969122d1ff37cb3febdfc6bdf30720 126 SUPERFAMILY SSF81343 11 122 7.85E-29 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_3274 78969122d1ff37cb3febdfc6bdf30720 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 111 2.8E-18 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_a0022 d3585f074ff18a3228cc4cdf86065b9a 407 Gene3D G3DSA:3.30.9.10 134 355 1.9E-33 T 14-10-2018 TMO_a0022 d3585f074ff18a3228cc4cdf86065b9a 407 Gene3D G3DSA:3.50.50.60 5 50 8.7E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0022 d3585f074ff18a3228cc4cdf86065b9a 407 Pfam PF01266 FAD dependent oxidoreductase 3 390 5.3E-47 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_a0022 d3585f074ff18a3228cc4cdf86065b9a 407 Gene3D G3DSA:3.50.50.60 113 396 1.9E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0022 d3585f074ff18a3228cc4cdf86065b9a 407 SUPERFAMILY SSF51905 1 397 8.8E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0401 f4413c7e7495373e8e035f9667dadb82 336 SUPERFAMILY SSF51197 3 328 1.65E-90 T 14-10-2018 TMO_c0401 f4413c7e7495373e8e035f9667dadb82 336 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 188 291 6.4E-18 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 TMO_c0401 f4413c7e7495373e8e035f9667dadb82 336 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 6 137 1.1E-28 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain TMO_c0401 f4413c7e7495373e8e035f9667dadb82 336 Gene3D G3DSA:2.60.120.330 2 334 1.6E-107 T 14-10-2018 IPR027443 Isopenicillin N synthase-like TMO_c0401 f4413c7e7495373e8e035f9667dadb82 336 PRINTS PR00682 Isopenicillin N synthase signature 246 272 5.5E-9 T 14-10-2018 TMO_c0401 f4413c7e7495373e8e035f9667dadb82 336 PRINTS PR00682 Isopenicillin N synthase signature 29 46 5.5E-9 T 14-10-2018 TMO_c0401 f4413c7e7495373e8e035f9667dadb82 336 PRINTS PR00682 Isopenicillin N synthase signature 160 176 5.5E-9 T 14-10-2018 TMO_a0440 3ebf7fc95818f456a66ff3320f511675 166 Gene3D G3DSA:3.10.129.10 18 166 7.1E-44 T 14-10-2018 TMO_a0440 3ebf7fc95818f456a66ff3320f511675 166 SUPERFAMILY SSF54637 18 165 5.19E-35 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_a0440 3ebf7fc95818f456a66ff3320f511675 166 Pfam PF01575 MaoC like domain 29 131 4.2E-13 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_a0510 04c10fb351bdd817538679456a594cd8 394 Gene3D G3DSA:2.40.110.10 122 231 3.7E-37 T 14-10-2018 TMO_a0510 04c10fb351bdd817538679456a594cd8 394 SUPERFAMILY SSF47203 229 394 1.77E-16 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_a0510 04c10fb351bdd817538679456a594cd8 394 Gene3D G3DSA:1.20.140.10 232 394 1.3E-29 T 14-10-2018 TMO_a0510 04c10fb351bdd817538679456a594cd8 394 Gene3D G3DSA:1.10.540.10 1 116 6.4E-24 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_a0510 04c10fb351bdd817538679456a594cd8 394 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 216 1.3E-20 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_a0510 04c10fb351bdd817538679456a594cd8 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 3 116 1.5E-17 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_a0510 04c10fb351bdd817538679456a594cd8 394 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 394 1.9E-14 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_a0510 04c10fb351bdd817538679456a594cd8 394 SUPERFAMILY SSF56645 2 241 3.14E-70 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_1023 13be686dc42232589d63a07ad4bd9158 70 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 64 1.1E-26 T 14-10-2018 IPR021074 Formate dehydrogenase, delta subunit TMO_0677 fc32b8a79bb3bb1922de5725319bd156 302 PRINTS PR00412 Epoxide hydrolase signature 50 65 5.6E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_0677 fc32b8a79bb3bb1922de5725319bd156 302 PRINTS PR00412 Epoxide hydrolase signature 250 272 5.6E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_0677 fc32b8a79bb3bb1922de5725319bd156 302 PRINTS PR00412 Epoxide hydrolase signature 218 234 5.6E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_0677 fc32b8a79bb3bb1922de5725319bd156 302 SUPERFAMILY SSF53474 3 273 5.59E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0677 fc32b8a79bb3bb1922de5725319bd156 302 Pfam PF00561 alpha/beta hydrolase fold 26 262 4.3E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0677 fc32b8a79bb3bb1922de5725319bd156 302 Gene3D G3DSA:3.40.50.1820 4 280 6.0E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1018 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 SUPERFAMILY SSF46785 3 100 2.55E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1018 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 1.3E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1018 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 4.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1018 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 4.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1018 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 4.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1018 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 Pfam PF03466 LysR substrate binding domain 86 292 5.9E-28 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1018 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 Gene3D G3DSA:1.10.10.10 1 83 2.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1018 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 Gene3D G3DSA:3.40.190.290 90 298 5.4E-31 T 14-10-2018 TMO_1018 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 SUPERFAMILY SSF53850 87 296 7.78E-29 T 14-10-2018 TMO_2788 1eb45944344930c161c905974a8e1ba7 454 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 451 43.235 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 TMO_2788 1eb45944344930c161c905974a8e1ba7 454 SUPERFAMILY SSF53383 1 449 2.01E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_2788 1eb45944344930c161c905974a8e1ba7 454 PIRSF PIRSF006815 1 452 6.9E-151 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 TMO_2788 1eb45944344930c161c905974a8e1ba7 454 Gene3D G3DSA:3.90.1150.10 73 448 1.3E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_2788 1eb45944344930c161c905974a8e1ba7 454 Pfam PF02347 Glycine cleavage system P-protein 1 447 4.7E-114 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 TMO_2788 1eb45944344930c161c905974a8e1ba7 454 Gene3D G3DSA:3.40.640.10 84 348 1.3E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_2889 6794b230e4870d03b4dd883ba95e59de 184 Pfam PF11233 Protein of unknown function (DUF3035) 25 161 1.8E-45 T 14-10-2018 IPR021395 Protein of unknown function DUF3035 TMO_2537 efb275b9cc9746668c2bc8801727da1a 481 Pfam PF00171 Aldehyde dehydrogenase family 25 476 6.5E-159 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_2537 efb275b9cc9746668c2bc8801727da1a 481 SUPERFAMILY SSF53720 6 478 1.44E-149 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_2537 efb275b9cc9746668c2bc8801727da1a 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_2537 efb275b9cc9746668c2bc8801727da1a 481 Gene3D G3DSA:3.40.605.10 27 470 5.2E-171 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_2537 efb275b9cc9746668c2bc8801727da1a 481 Gene3D G3DSA:3.40.309.10 255 445 5.2E-171 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_0834 d63d7b7f43093df156e9aa85fa5fb56a 223 SUPERFAMILY SSF48613 9 220 3.5E-52 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_0834 d63d7b7f43093df156e9aa85fa5fb56a 223 Pfam PF03070 TENA/THI-4/PQQC family 17 221 3.6E-20 T 14-10-2018 IPR004305 Thiaminase-2/PQQC TMO_0834 d63d7b7f43093df156e9aa85fa5fb56a 223 Gene3D G3DSA:1.20.910.10 3 221 1.2E-47 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_0834 d63d7b7f43093df156e9aa85fa5fb56a 223 PIRSF PIRSF003170 1 223 3.2E-68 T 14-10-2018 IPR026285 TenA_E protein TMO_1654 1e55ac142bef2e814fb18eb07aab1317 82 Pfam PF00137 ATP synthase subunit C 11 73 4.5E-15 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TMO_1654 1e55ac142bef2e814fb18eb07aab1317 82 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1654 1e55ac142bef2e814fb18eb07aab1317 82 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 21 77 1.5E-16 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TMO_1654 1e55ac142bef2e814fb18eb07aab1317 82 SUPERFAMILY SSF81333 3 79 1.31E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily TMO_1654 1e55ac142bef2e814fb18eb07aab1317 82 Gene3D G3DSA:1.20.20.10 4 81 2.8E-27 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1654 1e55ac142bef2e814fb18eb07aab1317 82 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.4 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1654 1e55ac142bef2e814fb18eb07aab1317 82 PRINTS PR00124 ATP synthase C subunit signature 50 75 6.6E-17 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1654 1e55ac142bef2e814fb18eb07aab1317 82 PRINTS PR00124 ATP synthase C subunit signature 12 31 6.6E-17 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1654 1e55ac142bef2e814fb18eb07aab1317 82 PRINTS PR00124 ATP synthase C subunit signature 33 48 6.6E-17 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1978 130da67b58a32bba8a89be26c998df80 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 120 9.8E-41 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1978 130da67b58a32bba8a89be26c998df80 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 20.097 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 TMO_1978 130da67b58a32bba8a89be26c998df80 121 Gene3D G3DSA:1.20.58.1610 1 121 8.3E-46 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_0686 cad07675aa9f1d568e291e0c2957d248 267 SUPERFAMILY SSF52402 2 203 9.86E-61 T 14-10-2018 TMO_0686 cad07675aa9f1d568e291e0c2957d248 267 Gene3D G3DSA:3.40.50.620 2 205 1.9E-58 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_0686 cad07675aa9f1d568e291e0c2957d248 267 PIRSF PIRSF002936 1 209 4.1E-90 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 TMO_0686 cad07675aa9f1d568e291e0c2957d248 267 PIRSF PIRSF002936 204 267 4.2E-19 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 TMO_0686 cad07675aa9f1d568e291e0c2957d248 267 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 25 222 1.0E-46 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 TMO_2764 d10e4ce06b7cf7ccb666d18322b6e0ca 160 SUPERFAMILY SSF46458 31 140 1.38E-26 T 14-10-2018 IPR009050 Globin-like superfamily TMO_2764 d10e4ce06b7cf7ccb666d18322b6e0ca 160 Gene3D G3DSA:1.10.490.10 26 147 1.9E-35 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_2764 d10e4ce06b7cf7ccb666d18322b6e0ca 160 Pfam PF01152 Bacterial-like globin 29 117 3.7E-5 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 TMO_1460 ffc50bde770141f48925c8eb4052a746 276 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 274 1.5E-129 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like TMO_1460 ffc50bde770141f48925c8eb4052a746 276 SUPERFAMILY SSF51621 3 197 3.77E-83 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_1460 ffc50bde770141f48925c8eb4052a746 276 Gene3D G3DSA:3.20.20.70 1 252 4.5E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1460 ffc50bde770141f48925c8eb4052a746 276 PIRSF PIRSF034452 1 276 3.3E-149 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like TMO_1460 ffc50bde770141f48925c8eb4052a746 276 Gene3D G3DSA:1.20.5.460 253 275 6.7E-6 T 14-10-2018 TMO_b0168 94c17e4307ad36797754e12c55439b90 84 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 2 79 9.8E-22 T 14-10-2018 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 TMO_b0168 94c17e4307ad36797754e12c55439b90 84 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 6 70 3.0E-7 T 14-10-2018 TMO_3260 9810d5d518c3d43dc3770f62e46b5334 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 431 9.0E-97 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_3260 9810d5d518c3d43dc3770f62e46b5334 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 425 3.5E-87 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_3260 9810d5d518c3d43dc3770f62e46b5334 435 PIRSF PIRSF006066 5 435 1.9E-89 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0869 bc4faf96de525ad2abd6afe554db404a 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 269 3.0E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0869 bc4faf96de525ad2abd6afe554db404a 281 Gene3D G3DSA:1.10.3720.10 85 275 2.9E-37 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0869 bc4faf96de525ad2abd6afe554db404a 281 SUPERFAMILY SSF161098 87 270 1.15E-42 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0511 7c737a0919838002b949d9c461f654ea 202 SUPERFAMILY SSF52833 4 200 7.27E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_b0511 7c737a0919838002b949d9c461f654ea 202 Gene3D G3DSA:3.40.30.10 5 202 1.1E-55 T 14-10-2018 TMO_b0511 7c737a0919838002b949d9c461f654ea 202 PIRSF PIRSF006386 1 202 1.4E-61 T 14-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TMO_b0511 7c737a0919838002b949d9c461f654ea 202 Pfam PF01323 DSBA-like thioredoxin domain 5 199 9.6E-32 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TMO_c0232 5a335f5df39681f66378720c93cc4b66 292 SUPERFAMILY SSF48452 56 245 8.35E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0232 5a335f5df39681f66378720c93cc4b66 292 Gene3D G3DSA:1.25.40.10 54 267 2.3E-63 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0232 5a335f5df39681f66378720c93cc4b66 292 Pfam PF13525 Outer membrane lipoprotein 54 249 4.2E-61 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like TMO_c0232 5a335f5df39681f66378720c93cc4b66 292 SMART SM00028 130 171 310.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_c0232 5a335f5df39681f66378720c93cc4b66 292 SMART SM00028 189 222 280.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_c0232 5a335f5df39681f66378720c93cc4b66 292 SMART SM00028 93 126 6.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_c0232 5a335f5df39681f66378720c93cc4b66 292 SMART SM00028 56 89 35.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_c0232 5a335f5df39681f66378720c93cc4b66 292 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 24 256 37.867 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD TMO_c0232 5a335f5df39681f66378720c93cc4b66 292 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 28 262 3.2E-92 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD TMO_b0382 94f3ee823d061727eebeaa9e8a5e0219 529 PIRSF PIRSF002741 4 528 3.9E-61 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_b0382 94f3ee823d061727eebeaa9e8a5e0219 529 Gene3D G3DSA:3.90.76.10 43 190 2.1E-89 T 14-10-2018 TMO_b0382 94f3ee823d061727eebeaa9e8a5e0219 529 Gene3D G3DSA:3.10.105.10 278 505 2.1E-89 T 14-10-2018 TMO_b0382 94f3ee823d061727eebeaa9e8a5e0219 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 434 3.7E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_b0382 94f3ee823d061727eebeaa9e8a5e0219 529 Gene3D G3DSA:3.40.190.10 191 512 2.1E-89 T 14-10-2018 TMO_b0382 94f3ee823d061727eebeaa9e8a5e0219 529 SUPERFAMILY SSF53850 28 522 8.51E-104 T 14-10-2018 TMO_0548 5def92c1b6a625a73db216405649671d 233 Gene3D G3DSA:3.40.30.10 12 216 6.2E-35 T 14-10-2018 TMO_0548 5def92c1b6a625a73db216405649671d 233 Gene3D G3DSA:1.20.1050.10 97 210 6.2E-35 T 14-10-2018 TMO_0548 5def92c1b6a625a73db216405649671d 233 SUPERFAMILY SSF47616 96 219 8.42E-11 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_0548 5def92c1b6a625a73db216405649671d 233 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 90 8.4E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_0548 5def92c1b6a625a73db216405649671d 233 SUPERFAMILY SSF52833 5 93 1.19E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_b0395 670967b8df547dc2383a9aef2c404adf 203 Gene3D G3DSA:3.90.330.10 3 203 3.0E-84 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0395 670967b8df547dc2383a9aef2c404adf 203 ProDom PD007559 HYDRATASE NITRILE ALPHA SUBUNIT LYASE CHAIN METAL-BINDING DIRECT SEQUENCING NITRILASE 12 198 4.0E-74 T 14-10-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0395 670967b8df547dc2383a9aef2c404adf 203 TIGRFAM TIGR01323 nitrile_alph: nitrile hydratase, alpha subunit 15 202 2.0E-87 T 14-10-2018 IPR018141 Nitrile hydratase, alpha subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0395 670967b8df547dc2383a9aef2c404adf 203 Pfam PF02979 Nitrile hydratase, alpha chain 15 197 1.9E-82 T 14-10-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0395 670967b8df547dc2383a9aef2c404adf 203 SUPERFAMILY SSF56209 12 201 8.24E-80 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0395 670967b8df547dc2383a9aef2c404adf 203 PIRSF PIRSF001426 3 203 6.0E-91 T 14-10-2018 IPR023900 Nitrile hydratase alpha subunit /Thiocyanate hydrolase gamma subunit KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_a0110 a3d4dab5e2a150562334a67b2bf46e99 263 SUPERFAMILY SSF56300 11 248 3.48E-18 T 14-10-2018 TMO_a0110 a3d4dab5e2a150562334a67b2bf46e99 263 Pfam PF00149 Calcineurin-like phosphoesterase 11 228 1.4E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TMO_0960 663fe8c6ec8270bd97bf96517d82ee8b 457 Gene3D G3DSA:2.40.50.100 60 120 1.0E-8 T 14-10-2018 TMO_0960 663fe8c6ec8270bd97bf96517d82ee8b 457 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 88 5.3E-12 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_0960 663fe8c6ec8270bd97bf96517d82ee8b 457 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 26 49 5.3E-12 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_0960 663fe8c6ec8270bd97bf96517d82ee8b 457 Pfam PF13533 Biotin-lipoyl like 65 98 3.4E-9 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TMO_0960 663fe8c6ec8270bd97bf96517d82ee8b 457 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 17 314 2.7E-76 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 TMO_0559 5c42fe6d23f74bae78fe87c84010c32d 590 Gene3D G3DSA:3.40.50.970 384 583 2.1E-53 T 14-10-2018 TMO_0559 5c42fe6d23f74bae78fe87c84010c32d 590 SUPERFAMILY SSF52518 390 571 1.43E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_0559 5c42fe6d23f74bae78fe87c84010c32d 590 SUPERFAMILY SSF52467 171 381 2.5E-43 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_0559 5c42fe6d23f74bae78fe87c84010c32d 590 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 214 347 1.8E-33 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TMO_0559 5c42fe6d23f74bae78fe87c84010c32d 590 SUPERFAMILY SSF52518 19 192 6.34E-48 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_0559 5c42fe6d23f74bae78fe87c84010c32d 590 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 415 563 6.2E-35 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_0559 5c42fe6d23f74bae78fe87c84010c32d 590 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 21 185 4.0E-47 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TMO_0559 5c42fe6d23f74bae78fe87c84010c32d 590 Gene3D G3DSA:3.40.50.1220 208 383 1.5E-46 T 14-10-2018 TMO_0559 5c42fe6d23f74bae78fe87c84010c32d 590 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 451 470 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TMO_0559 5c42fe6d23f74bae78fe87c84010c32d 590 Gene3D G3DSA:3.40.50.970 15 191 1.4E-52 T 14-10-2018 TMO_1520 713d9d3e61b4576be53d2de870ed5e36 224 SUPERFAMILY SSF52172 11 120 1.57E-19 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1520 713d9d3e61b4576be53d2de870ed5e36 224 SMART SM00862 145 221 4.3E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_1520 713d9d3e61b4576be53d2de870ed5e36 224 Gene3D G3DSA:1.10.10.10 123 224 3.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1520 713d9d3e61b4576be53d2de870ed5e36 224 SUPERFAMILY SSF46894 122 222 3.4E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_1520 713d9d3e61b4576be53d2de870ed5e36 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 221 2.6E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_1520 713d9d3e61b4576be53d2de870ed5e36 224 Gene3D G3DSA:3.40.50.2300 2 116 5.9E-18 T 14-10-2018 TMO_1520 713d9d3e61b4576be53d2de870ed5e36 224 Pfam PF00072 Response regulator receiver domain 11 108 4.7E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1520 713d9d3e61b4576be53d2de870ed5e36 224 SMART SM00448 1 107 5.9E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0705 db3b807eb104818c80c59349ce7a479b 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 227 240 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TMO_c0705 db3b807eb104818c80c59349ce7a479b 389 SUPERFAMILY SSF53383 4 380 7.26E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0705 db3b807eb104818c80c59349ce7a479b 389 Pfam PF00155 Aminotransferase class I and II 30 374 2.8E-54 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_c0705 db3b807eb104818c80c59349ce7a479b 389 Gene3D G3DSA:3.40.640.10 2 383 6.6E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_d0041 3788c4d22c66210f1be78842c7d8f3cb 322 PIRSF PIRSF015582 27 321 5.4E-77 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like TMO_d0041 3788c4d22c66210f1be78842c7d8f3cb 322 Gene3D G3DSA:3.20.20.60 35 321 3.2E-84 T 14-10-2018 TMO_d0041 3788c4d22c66210f1be78842c7d8f3cb 322 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 46 259 2.2E-40 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_d0041 3788c4d22c66210f1be78842c7d8f3cb 322 SUPERFAMILY SSF51621 43 270 5.93E-60 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_3051 7858696340dbff0e742e36b14ca614e7 159 Gene3D G3DSA:3.10.129.10 13 148 3.6E-26 T 14-10-2018 TMO_3051 7858696340dbff0e742e36b14ca614e7 159 SUPERFAMILY SSF54637 17 147 1.01E-21 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_3051 7858696340dbff0e742e36b14ca614e7 159 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 31 129 2.9E-13 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_3293 735503a48a12d2b6e611abf5f9769b0c 265 SUPERFAMILY SSF53213 8 249 2.62E-79 T 14-10-2018 TMO_3293 735503a48a12d2b6e611abf5f9769b0c 265 PIRSF PIRSF006157 5 265 6.3E-78 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 TMO_3293 735503a48a12d2b6e611abf5f9769b0c 265 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 42 249 2.5E-37 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 TMO_3293 735503a48a12d2b6e611abf5f9769b0c 265 Gene3D G3DSA:3.40.830.10 3 263 1.2E-82 T 14-10-2018 TMO_c0259 d37aae407051a42fc4f26d97235778a9 1213 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 14 192 1.6E-62 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_c0259 d37aae407051a42fc4f26d97235778a9 1213 Pfam PF01968 Hydantoinase/oxoprolinase 212 499 2.7E-117 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_c0259 d37aae407051a42fc4f26d97235778a9 1213 Pfam PF02538 Hydantoinase B/oxoprolinase 699 1209 3.1E-209 T 14-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_b0058 aeb8792520fed2186f13062014c4ebe5 261 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_b0058 aeb8792520fed2186f13062014c4ebe5 261 SUPERFAMILY SSF52540 13 253 3.31E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0058 aeb8792520fed2186f13062014c4ebe5 261 SMART SM00382 37 231 8.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0058 aeb8792520fed2186f13062014c4ebe5 261 Gene3D G3DSA:3.40.50.300 8 260 1.3E-72 T 14-10-2018 TMO_b0058 aeb8792520fed2186f13062014c4ebe5 261 Pfam PF00005 ABC transporter 28 183 1.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0058 aeb8792520fed2186f13062014c4ebe5 261 PIRSF PIRSF039085 9 259 7.9E-108 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TMO_c0521 0fc6f5ebcbe0d0f40a2d79111840a473 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 302 1.4E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0521 0fc6f5ebcbe0d0f40a2d79111840a473 315 Gene3D G3DSA:1.10.3720.10 56 301 1.1E-67 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0521 0fc6f5ebcbe0d0f40a2d79111840a473 315 SUPERFAMILY SSF161098 70 294 5.76E-62 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0225 0192efe6a197695d4b0b380a27b8b522 465 Gene3D G3DSA:3.40.640.10 144 360 4.2E-65 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_a0225 0192efe6a197695d4b0b380a27b8b522 465 Gene3D G3DSA:1.10.10.10 11 109 7.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0225 0192efe6a197695d4b0b380a27b8b522 465 Pfam PF00155 Aminotransferase class I and II 143 448 3.2E-27 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_a0225 0192efe6a197695d4b0b380a27b8b522 465 SUPERFAMILY SSF53383 143 458 4.31E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_a0225 0192efe6a197695d4b0b380a27b8b522 465 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 6.1E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_a0225 0192efe6a197695d4b0b380a27b8b522 465 SUPERFAMILY SSF46785 8 78 5.06E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0225 0192efe6a197695d4b0b380a27b8b522 465 Gene3D G3DSA:3.90.1150.10 142 450 4.2E-65 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_a0225 0192efe6a197695d4b0b380a27b8b522 465 SMART SM00345 15 74 2.2E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2303 b26b0681ac527496f66856fc485eae3c 496 Gene3D G3DSA:3.40.309.10 272 461 6.6E-183 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_2303 b26b0681ac527496f66856fc485eae3c 496 SUPERFAMILY SSF53720 19 492 5.89E-172 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_2303 b26b0681ac527496f66856fc485eae3c 496 Pfam PF00171 Aldehyde dehydrogenase family 30 487 9.0E-171 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_2303 b26b0681ac527496f66856fc485eae3c 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TMO_2303 b26b0681ac527496f66856fc485eae3c 496 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 41 487 2.1E-219 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 TMO_2303 b26b0681ac527496f66856fc485eae3c 496 Gene3D G3DSA:3.40.605.10 30 484 6.6E-183 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_2303 b26b0681ac527496f66856fc485eae3c 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_2803 58a6cb6575c811496b24b5500f4dd258 425 SUPERFAMILY SSF63411 7 217 2.75E-62 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_2803 58a6cb6575c811496b24b5500f4dd258 425 Pfam PF00675 Insulinase (Peptidase family M16) 18 165 7.9E-46 T 14-10-2018 IPR011765 Peptidase M16, N-terminal TMO_2803 58a6cb6575c811496b24b5500f4dd258 425 Pfam PF05193 Peptidase M16 inactive domain 174 344 9.9E-37 T 14-10-2018 IPR007863 Peptidase M16, C-terminal TMO_2803 58a6cb6575c811496b24b5500f4dd258 425 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 39 62 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 TMO_2803 58a6cb6575c811496b24b5500f4dd258 425 SUPERFAMILY SSF63411 224 425 2.71E-47 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_2803 58a6cb6575c811496b24b5500f4dd258 425 Gene3D G3DSA:3.30.830.10 8 221 1.3E-74 T 14-10-2018 TMO_2803 58a6cb6575c811496b24b5500f4dd258 425 Gene3D G3DSA:3.30.830.10 222 424 3.5E-59 T 14-10-2018 TMO_c0694 e4f30b9d9dc5d4f5d77602f53b48143d 158 Gene3D G3DSA:3.10.129.10 2 158 1.1E-41 T 14-10-2018 TMO_c0694 e4f30b9d9dc5d4f5d77602f53b48143d 158 SUPERFAMILY SSF54637 5 153 8.62E-35 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_c0694 e4f30b9d9dc5d4f5d77602f53b48143d 158 Pfam PF01575 MaoC like domain 21 113 3.4E-18 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_3029 418d937c23a36f75dd5220591560dc8b 298 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 102 229 5.7E-8 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase TMO_3029 418d937c23a36f75dd5220591560dc8b 298 SUPERFAMILY SSF51197 54 250 9.06E-19 T 14-10-2018 TMO_3029 418d937c23a36f75dd5220591560dc8b 298 Gene3D G3DSA:2.60.120.620 41 286 7.9E-16 T 14-10-2018 TMO_2333 3feebf3049faaef7763a5339d8a2a445 231 Gene3D G3DSA:3.90.850.10 3 231 9.0E-83 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_2333 3feebf3049faaef7763a5339d8a2a445 231 SUPERFAMILY SSF56529 22 231 5.1E-65 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_2333 3feebf3049faaef7763a5339d8a2a445 231 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 29 230 7.7E-51 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 TMO_0240 b2cd94058cc875bdf261d752f2ef1e27 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0240 b2cd94058cc875bdf261d752f2ef1e27 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0240 b2cd94058cc875bdf261d752f2ef1e27 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0240 b2cd94058cc875bdf261d752f2ef1e27 142 SUPERFAMILY SSF46785 9 141 4.61E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0240 b2cd94058cc875bdf261d752f2ef1e27 142 Pfam PF12802 MarR family 33 91 5.0E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0240 b2cd94058cc875bdf261d752f2ef1e27 142 SMART SM00347 27 127 1.9E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0240 b2cd94058cc875bdf261d752f2ef1e27 142 Gene3D G3DSA:1.10.10.10 7 139 1.9E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0240 b2cd94058cc875bdf261d752f2ef1e27 142 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_b0536 949c9f7584de69155fa954716da558ea 115 Pfam PF00892 EamA-like transporter family 1 98 7.2E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_b0536 949c9f7584de69155fa954716da558ea 115 SUPERFAMILY SSF103481 2 101 5.89E-11 T 14-10-2018 TMO_b0002 6eb01dca93a50f40ce962467664eeaeb 333 Pfam PF05954 Phage late control gene D protein (GPD) 112 313 1.1E-13 T 14-10-2018 TMO_b0002 6eb01dca93a50f40ce962467664eeaeb 333 SUPERFAMILY SSF69279 3 173 6.8E-21 T 14-10-2018 TMO_1298 721e6ad0be15d560f2345f11afa110b7 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 72 1.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1298 721e6ad0be15d560f2345f11afa110b7 209 Gene3D G3DSA:1.10.357.10 25 208 7.2E-20 T 14-10-2018 TMO_1298 721e6ad0be15d560f2345f11afa110b7 209 SUPERFAMILY SSF46689 19 89 2.79E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0050 6af9faea32e1fe9c7e5ddf51787fc978 300 Pfam PF01909 Nucleotidyltransferase domain 31 74 4.1E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TMO_c0050 6af9faea32e1fe9c7e5ddf51787fc978 300 Gene3D G3DSA:3.30.460.10 17 154 1.3E-7 T 14-10-2018 TMO_c0050 6af9faea32e1fe9c7e5ddf51787fc978 300 SUPERFAMILY SSF81301 3 156 2.29E-20 T 14-10-2018 TMO_3509 9caacf212bb2018982b4be33896798f0 241 PIRSF PIRSF003107 5 224 1.4E-67 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 TMO_3509 9caacf212bb2018982b4be33896798f0 241 Pfam PF01895 PhoU domain 23 110 3.6E-21 T 14-10-2018 IPR026022 PhoU domain TMO_3509 9caacf212bb2018982b4be33896798f0 241 Pfam PF01895 PhoU domain 126 211 1.1E-22 T 14-10-2018 IPR026022 PhoU domain TMO_3509 9caacf212bb2018982b4be33896798f0 241 Gene3D G3DSA:1.20.58.220 3 114 2.3E-35 T 14-10-2018 IPR038078 PhoU-like domain superfamily TMO_3509 9caacf212bb2018982b4be33896798f0 241 SUPERFAMILY SSF109755 10 226 1.02E-70 T 14-10-2018 TMO_3509 9caacf212bb2018982b4be33896798f0 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.3E-68 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 TMO_3509 9caacf212bb2018982b4be33896798f0 241 Gene3D G3DSA:1.20.58.220 115 228 4.4E-40 T 14-10-2018 IPR038078 PhoU-like domain superfamily TMO_1114 3f05e08ad4872ea2dc5ec9e05e557aff 298 SUPERFAMILY SSF103481 200 295 6.41E-10 T 14-10-2018 TMO_1114 3f05e08ad4872ea2dc5ec9e05e557aff 298 SUPERFAMILY SSF103481 50 152 3.01E-12 T 14-10-2018 TMO_1114 3f05e08ad4872ea2dc5ec9e05e557aff 298 Pfam PF00892 EamA-like transporter family 166 294 1.7E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1114 3f05e08ad4872ea2dc5ec9e05e557aff 298 Pfam PF00892 EamA-like transporter family 25 150 8.6E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_0235 9eb179c6bcd435a6fa82a130a76f4075 281 SUPERFAMILY SSF53639 45 264 1.47E-70 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_0235 9eb179c6bcd435a6fa82a130a76f4075 281 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 52 232 2.1E-49 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_0235 9eb179c6bcd435a6fa82a130a76f4075 281 Gene3D G3DSA:3.40.225.10 30 279 1.4E-87 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_0235 9eb179c6bcd435a6fa82a130a76f4075 281 SMART SM01007 52 232 2.6E-59 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_2897 bd5c7dc5be2b581dce4ee57a26929859 330 SUPERFAMILY SSF50129 4 149 8.96E-32 T 14-10-2018 IPR011032 GroES-like superfamily TMO_2897 bd5c7dc5be2b581dce4ee57a26929859 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 1.2E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_2897 bd5c7dc5be2b581dce4ee57a26929859 330 Gene3D G3DSA:3.40.50.720 120 292 1.3E-78 T 14-10-2018 TMO_2897 bd5c7dc5be2b581dce4ee57a26929859 330 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 312 328 5.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2897 bd5c7dc5be2b581dce4ee57a26929859 330 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 159 5.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2897 bd5c7dc5be2b581dce4ee57a26929859 330 Pfam PF00107 Zinc-binding dehydrogenase 151 267 6.6E-19 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_2897 bd5c7dc5be2b581dce4ee57a26929859 330 SUPERFAMILY SSF51735 111 269 4.31E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2897 bd5c7dc5be2b581dce4ee57a26929859 330 SMART SM00829 10 322 2.0E-24 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_2897 bd5c7dc5be2b581dce4ee57a26929859 330 Gene3D G3DSA:3.90.180.10 9 320 1.3E-78 T 14-10-2018 TMO_0698 204d1019c220f9d1bb7079ae980825e7 527 Pfam PF00501 AMP-binding enzyme 10 425 2.7E-96 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0698 204d1019c220f9d1bb7079ae980825e7 527 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0698 204d1019c220f9d1bb7079ae980825e7 527 Gene3D G3DSA:3.40.50.12780 1 418 2.1E-119 T 14-10-2018 TMO_0698 204d1019c220f9d1bb7079ae980825e7 527 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 510 3.1E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0698 204d1019c220f9d1bb7079ae980825e7 527 Gene3D G3DSA:3.30.300.310 421 523 1.1E-27 T 14-10-2018 TMO_0698 204d1019c220f9d1bb7079ae980825e7 527 SUPERFAMILY SSF56801 4 522 1.09E-155 T 14-10-2018 TMO_0574 ad9effeb8dd16c957c078fb0606c2347 278 Pfam PF09140 ATPase MipZ 8 270 3.7E-110 T 14-10-2018 IPR015223 ATPase MipZ TMO_0574 ad9effeb8dd16c957c078fb0606c2347 278 Gene3D G3DSA:3.40.50.300 6 277 9.0E-64 T 14-10-2018 TMO_0574 ad9effeb8dd16c957c078fb0606c2347 278 SUPERFAMILY SSF52540 7 239 2.0E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0248 f96f76404da8cd7a76b60e17407fe3d3 319 Pfam PF13407 Periplasmic binding protein domain 34 288 8.7E-43 T 14-10-2018 IPR025997 Periplasmic binding protein TMO_a0248 f96f76404da8cd7a76b60e17407fe3d3 319 Gene3D G3DSA:3.40.50.2300 28 287 6.9E-104 T 14-10-2018 TMO_a0248 f96f76404da8cd7a76b60e17407fe3d3 319 SUPERFAMILY SSF53822 24 304 1.88E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_a0248 f96f76404da8cd7a76b60e17407fe3d3 319 Gene3D G3DSA:3.40.50.2300 129 270 6.9E-104 T 14-10-2018 TMO_a0107 5b865e23f5cfa5b621518602e8c9df87 913 SMART SM00642 6 453 5.2E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_a0107 5b865e23f5cfa5b621518602e8c9df87 913 SUPERFAMILY SSF51445 5 804 2.43E-122 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_a0107 5b865e23f5cfa5b621518602e8c9df87 913 Pfam PF00128 Alpha amylase, catalytic domain 28 120 7.7E-13 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TMO_a0107 5b865e23f5cfa5b621518602e8c9df87 913 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 5 910 1.9E-279 T 14-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 TMO_a0107 5b865e23f5cfa5b621518602e8c9df87 913 Gene3D G3DSA:3.20.20.80 4 126 5.0E-26 T 14-10-2018 TMO_a0107 5b865e23f5cfa5b621518602e8c9df87 913 Gene3D G3DSA:3.20.20.80 218 383 5.0E-37 T 14-10-2018 TMO_a0107 5b865e23f5cfa5b621518602e8c9df87 913 Gene3D G3DSA:3.20.20.80 699 808 9.2E-30 T 14-10-2018 TMO_1291 90d40c5ff5306ba60f0e05ab27cdbbaa 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 68 334 8.9E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2308 ad10879d45707bf3623e586f0cd2267f 468 SUPERFAMILY SSF51338 4 72 6.12E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2308 ad10879d45707bf3623e586f0cd2267f 468 SUPERFAMILY SSF51556 60 365 2.12E-64 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_2308 ad10879d45707bf3623e586f0cd2267f 468 Pfam PF01979 Amidohydrolase family 57 414 7.2E-23 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_2308 ad10879d45707bf3623e586f0cd2267f 468 SUPERFAMILY SSF51338 340 444 1.53E-21 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2308 ad10879d45707bf3623e586f0cd2267f 468 Gene3D G3DSA:2.30.40.10 24 420 7.5E-98 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_2308 ad10879d45707bf3623e586f0cd2267f 468 Gene3D G3DSA:3.20.20.140 61 425 7.5E-98 T 14-10-2018 TMO_1760 7c8af5a93adaf2350b00bc1d5233fc5a 271 SUPERFAMILY SSF51366 12 263 2.59E-85 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TMO_1760 7c8af5a93adaf2350b00bc1d5233fc5a 271 Gene3D G3DSA:3.20.20.70 1 266 8.5E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1760 7c8af5a93adaf2350b00bc1d5233fc5a 271 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 57 75 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 TMO_1760 7c8af5a93adaf2350b00bc1d5233fc5a 271 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 261 2.7E-95 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 TMO_1760 7c8af5a93adaf2350b00bc1d5233fc5a 271 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 263 35.678 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 TMO_2521 3d8e000d0ef5830a05044849cce4833d 306 SUPERFAMILY SSF54506 21 283 7.46E-14 T 14-10-2018 TMO_2521 3d8e000d0ef5830a05044849cce4833d 306 Gene3D G3DSA:3.10.310.10 42 115 1.0E-16 T 14-10-2018 TMO_2521 3d8e000d0ef5830a05044849cce4833d 306 Gene3D G3DSA:3.10.310.10 116 247 1.0E-16 T 14-10-2018 TMO_0395 70be768729d9cf27bf0ae1a45dc9e73f 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 3.9E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0395 70be768729d9cf27bf0ae1a45dc9e73f 302 SUPERFAMILY SSF46785 8 116 9.8E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0395 70be768729d9cf27bf0ae1a45dc9e73f 302 Pfam PF03466 LysR substrate binding domain 94 291 1.5E-20 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0395 70be768729d9cf27bf0ae1a45dc9e73f 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0395 70be768729d9cf27bf0ae1a45dc9e73f 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0395 70be768729d9cf27bf0ae1a45dc9e73f 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0395 70be768729d9cf27bf0ae1a45dc9e73f 302 Gene3D G3DSA:1.10.10.10 7 95 5.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0395 70be768729d9cf27bf0ae1a45dc9e73f 302 Gene3D G3DSA:3.40.190.10 99 276 6.8E-21 T 14-10-2018 TMO_0395 70be768729d9cf27bf0ae1a45dc9e73f 302 Gene3D G3DSA:3.40.190.10 169 267 6.8E-21 T 14-10-2018 TMO_0395 70be768729d9cf27bf0ae1a45dc9e73f 302 SUPERFAMILY SSF53850 95 292 2.53E-22 T 14-10-2018 TMO_0738 0eeb3fb4a7b176fcb00ce45706e3f7b7 296 SUPERFAMILY SSF103481 181 285 1.44E-14 T 14-10-2018 TMO_0738 0eeb3fb4a7b176fcb00ce45706e3f7b7 296 Pfam PF00892 EamA-like transporter family 147 278 6.0E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_0738 0eeb3fb4a7b176fcb00ce45706e3f7b7 296 Pfam PF00892 EamA-like transporter family 11 137 2.5E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_0738 0eeb3fb4a7b176fcb00ce45706e3f7b7 296 SUPERFAMILY SSF103481 50 140 4.97E-10 T 14-10-2018 TMO_0894 bde442c1ea5dabfabfa0135f24d9322d 233 SUPERFAMILY SSF100950 44 229 8.79E-40 T 14-10-2018 IPR037171 NagB/RpiA transferase-like TMO_0894 bde442c1ea5dabfabfa0135f24d9322d 233 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 44 225 4.1E-38 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TMO_0894 bde442c1ea5dabfabfa0135f24d9322d 233 PIRSF PIRSF006806 40 228 2.9E-28 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TMO_0894 bde442c1ea5dabfabfa0135f24d9322d 233 Gene3D G3DSA:3.40.50.10420 42 231 2.7E-43 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily TMO_0894 bde442c1ea5dabfabfa0135f24d9322d 233 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 44 225 1.0E-29 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TMO_b0072 d6a9d2d6eb7344e496e3498240760dff 152 SUPERFAMILY SSF55729 7 146 4.22E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_b0072 d6a9d2d6eb7344e496e3498240760dff 152 Gene3D G3DSA:3.40.630.30 20 151 9.2E-32 T 14-10-2018 TMO_b0072 d6a9d2d6eb7344e496e3498240760dff 152 Pfam PF00583 Acetyltransferase (GNAT) family 42 140 6.2E-16 T 14-10-2018 IPR000182 GNAT domain TMO_c0736 0f741848096f9973bd2f5fa3d7411dd3 355 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 76 350 3.7E-57 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 TMO_c0736 0f741848096f9973bd2f5fa3d7411dd3 355 Pfam PF05128 Domain of unknown function (DUF697) 194 350 1.2E-38 T 14-10-2018 IPR021147 Protein of unknown function DUF697 TMO_0172 19ae5d89a2ad7dac8fbc56add10dc4b9 135 Pfam PF03610 PTS system fructose IIA component 3 114 4.0E-29 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 TMO_0172 19ae5d89a2ad7dac8fbc56add10dc4b9 135 SUPERFAMILY SSF53062 1 129 5.49E-38 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 TMO_0172 19ae5d89a2ad7dac8fbc56add10dc4b9 135 Gene3D G3DSA:3.40.50.510 1 132 2.4E-40 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 TMO_b0194 f581f0270a5386f5b1d356cd23a52e27 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 63 3.0E-8 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_b0194 f581f0270a5386f5b1d356cd23a52e27 152 SUPERFAMILY SSF47741 84 151 7.72E-28 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily TMO_b0194 f581f0270a5386f5b1d356cd23a52e27 152 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TMO_b0194 f581f0270a5386f5b1d356cd23a52e27 152 Gene3D G3DSA:1.10.150.120 82 152 4.5E-23 T 14-10-2018 TMO_b0194 f581f0270a5386f5b1d356cd23a52e27 152 Pfam PF01799 [2Fe-2S] binding domain 73 145 1.8E-23 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_b0194 f581f0270a5386f5b1d356cd23a52e27 152 SUPERFAMILY SSF54292 2 77 9.83E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_b0194 f581f0270a5386f5b1d356cd23a52e27 152 Gene3D G3DSA:3.10.20.30 1 78 7.8E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_2577 1512ea47f347e4085c95b1775c97456a 377 SUPERFAMILY SSF56645 2 240 7.33E-85 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_2577 1512ea47f347e4085c95b1775c97456a 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 2.9E-27 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_2577 1512ea47f347e4085c95b1775c97456a 377 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_2577 1512ea47f347e4085c95b1775c97456a 377 PIRSF PIRSF016578 222 376 8.2E-12 T 14-10-2018 TMO_2577 1512ea47f347e4085c95b1775c97456a 377 PIRSF PIRSF016578 3 192 5.8E-11 T 14-10-2018 TMO_2577 1512ea47f347e4085c95b1775c97456a 377 SUPERFAMILY SSF47203 226 375 3.54E-58 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_2577 1512ea47f347e4085c95b1775c97456a 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 4.7E-52 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_2577 1512ea47f347e4085c95b1775c97456a 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 115 8.0E-43 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_2577 1512ea47f347e4085c95b1775c97456a 377 Gene3D G3DSA:2.40.110.10 119 231 9.6E-40 T 14-10-2018 TMO_2577 1512ea47f347e4085c95b1775c97456a 377 Gene3D G3DSA:1.20.140.10 232 377 5.9E-56 T 14-10-2018 TMO_2577 1512ea47f347e4085c95b1775c97456a 377 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_2577 1512ea47f347e4085c95b1775c97456a 377 Gene3D G3DSA:1.10.540.10 1 118 7.3E-51 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_1403 6525e24cde86e8ca1388c045e9ee6103 271 Gene3D G3DSA:1.10.12.10 214 271 1.0E-12 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_1403 6525e24cde86e8ca1388c045e9ee6103 271 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 112 132 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_1403 6525e24cde86e8ca1388c045e9ee6103 271 SUPERFAMILY SSF52096 7 270 3.21E-63 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_1403 6525e24cde86e8ca1388c045e9ee6103 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 270 3.0E-45 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_1403 6525e24cde86e8ca1388c045e9ee6103 271 Gene3D G3DSA:3.90.226.10 2 212 5.5E-56 T 14-10-2018 TMO_b0373 f9a14185b17399516126a13194e603b9 313 SUPERFAMILY SSF161098 73 301 3.79E-54 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0373 f9a14185b17399516126a13194e603b9 313 Gene3D G3DSA:1.10.3720.10 69 309 5.0E-65 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0373 f9a14185b17399516126a13194e603b9 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 300 7.4E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_a0396 ee813cc93e9a540c8d58c2bb04fced60 473 Pfam PF00890 FAD binding domain 19 436 9.4E-57 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_a0396 ee813cc93e9a540c8d58c2bb04fced60 473 Gene3D G3DSA:3.50.50.60 19 461 4.4E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0396 ee813cc93e9a540c8d58c2bb04fced60 473 SUPERFAMILY SSF51905 16 463 2.54E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0396 ee813cc93e9a540c8d58c2bb04fced60 473 Gene3D G3DSA:3.90.700.10 253 400 4.4E-115 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_a0396 ee813cc93e9a540c8d58c2bb04fced60 473 SUPERFAMILY SSF56425 260 404 1.52E-27 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_a0396 ee813cc93e9a540c8d58c2bb04fced60 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 18 40 6.8E-6 T 14-10-2018 TMO_a0396 ee813cc93e9a540c8d58c2bb04fced60 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 52 67 6.8E-6 T 14-10-2018 TMO_3364 0554d1d6bb1ebc6dfcb88ea8b2846dbf 124 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 24 107 6.4E-31 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 TMO_3364 0554d1d6bb1ebc6dfcb88ea8b2846dbf 124 SUPERFAMILY SSF101386 22 111 8.97E-25 T 14-10-2018 TMO_3364 0554d1d6bb1ebc6dfcb88ea8b2846dbf 124 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 21 107 20.001 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 TMO_3364 0554d1d6bb1ebc6dfcb88ea8b2846dbf 124 Gene3D G3DSA:1.10.287.1080 20 114 1.4E-30 T 14-10-2018 TMO_3364 0554d1d6bb1ebc6dfcb88ea8b2846dbf 124 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 26 110 1.3E-17 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 TMO_3123 a0233166fbdda96f1b1089d9b99c12a6 142 Pfam PF09722 Protein of unknown function (DUF2384) 88 139 1.1E-12 T 14-10-2018 IPR024467 Domain of unknown function DUF2384 TMO_3123 a0233166fbdda96f1b1089d9b99c12a6 142 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 21 142 9.7E-42 T 14-10-2018 IPR011979 Conserved hypothetical protein CHP02293 TMO_0703 ee763b5ab2eaf31c55b922666350dcab 284 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 25 275 2.1E-91 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 TMO_0703 ee763b5ab2eaf31c55b922666350dcab 284 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 20 278 1.5E-117 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 TMO_0703 ee763b5ab2eaf31c55b922666350dcab 284 Gene3D G3DSA:1.10.3720.10 21 281 3.0E-61 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0703 ee763b5ab2eaf31c55b922666350dcab 284 SUPERFAMILY SSF161098 19 272 1.57E-52 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0703 ee763b5ab2eaf31c55b922666350dcab 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 277 2.3E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0953 31665d1ba4f89813f6f2ad467919a381 293 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 36 181 2.8E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_0953 31665d1ba4f89813f6f2ad467919a381 293 Gene3D G3DSA:3.40.50.300 11 206 7.6E-28 T 14-10-2018 TMO_0953 31665d1ba4f89813f6f2ad467919a381 293 SMART SM00382 32 190 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0953 31665d1ba4f89813f6f2ad467919a381 293 SUPERFAMILY SSF52540 14 253 2.1E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1135 877570ee6f9c8fd517483e4fc71204e0 297 SUPERFAMILY SSF48179 169 261 1.96E-14 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_1135 877570ee6f9c8fd517483e4fc71204e0 297 Gene3D G3DSA:1.10.1040.10 170 290 1.2E-33 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_1135 877570ee6f9c8fd517483e4fc71204e0 297 SUPERFAMILY SSF51735 2 166 4.16E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1135 877570ee6f9c8fd517483e4fc71204e0 297 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 169 235 1.8E-14 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_1135 877570ee6f9c8fd517483e4fc71204e0 297 Gene3D G3DSA:3.40.50.720 1 169 1.2E-42 T 14-10-2018 TMO_1135 877570ee6f9c8fd517483e4fc71204e0 297 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2 165 2.9E-36 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TMO_1135 877570ee6f9c8fd517483e4fc71204e0 297 PIRSF PIRSF000105 1 285 5.7E-56 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 TMO_b0119 8150e39b319c552db98f4b04a187bf96 270 SUPERFAMILY SSF51735 6 261 3.69E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0119 8150e39b319c552db98f4b04a187bf96 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 9.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0119 8150e39b319c552db98f4b04a187bf96 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 9.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0119 8150e39b319c552db98f4b04a187bf96 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 9.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0119 8150e39b319c552db98f4b04a187bf96 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 9.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0119 8150e39b319c552db98f4b04a187bf96 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0119 8150e39b319c552db98f4b04a187bf96 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 9.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0119 8150e39b319c552db98f4b04a187bf96 270 Gene3D G3DSA:3.40.50.720 5 266 8.3E-69 T 14-10-2018 TMO_b0119 8150e39b319c552db98f4b04a187bf96 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 6.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0119 8150e39b319c552db98f4b04a187bf96 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0119 8150e39b319c552db98f4b04a187bf96 270 Pfam PF00106 short chain dehydrogenase 10 194 4.0E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0312 618b3fda4c22f77130681fa28b5c4d6a 300 TIGRFAM TIGR02772 Ku_bact: Ku protein 23 281 5.1E-83 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type TMO_a0312 618b3fda4c22f77130681fa28b5c4d6a 300 PIRSF PIRSF006493 22 300 1.5E-80 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type TMO_a0312 618b3fda4c22f77130681fa28b5c4d6a 300 SMART SM00559 74 204 3.5E-20 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 TMO_a0312 618b3fda4c22f77130681fa28b5c4d6a 300 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 23 280 30.438 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type TMO_a0312 618b3fda4c22f77130681fa28b5c4d6a 300 SUPERFAMILY SSF100939 24 280 8.44E-43 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily TMO_a0312 618b3fda4c22f77130681fa28b5c4d6a 300 Gene3D G3DSA:2.40.290.10 25 203 6.0E-15 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily TMO_a0312 618b3fda4c22f77130681fa28b5c4d6a 300 Pfam PF02735 Ku70/Ku80 beta-barrel domain 35 197 7.3E-32 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 TMO_b0403 8d1ab4269e225705c58ac77f5b23abba 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TMO_b0403 8d1ab4269e225705c58ac77f5b23abba 479 Pfam PF00171 Aldehyde dehydrogenase family 20 466 6.9E-155 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_b0403 8d1ab4269e225705c58ac77f5b23abba 479 Gene3D G3DSA:3.40.309.10 248 436 5.2E-167 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_b0403 8d1ab4269e225705c58ac77f5b23abba 479 SUPERFAMILY SSF53720 8 468 3.53E-155 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_b0403 8d1ab4269e225705c58ac77f5b23abba 479 Gene3D G3DSA:3.40.605.10 22 463 5.2E-167 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_c0386 51b196bcba4fddcc90474f92e3beaddb 290 Pfam PF05107 CRISPR-associated protein Cas7 6 276 1.7E-110 T 14-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C TMO_c0386 51b196bcba4fddcc90474f92e3beaddb 290 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 5 276 4.6E-84 T 14-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C TMO_c0386 51b196bcba4fddcc90474f92e3beaddb 290 TIGRFAM TIGR02589 cas_Csd2: CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG 7 288 6.0E-122 T 14-10-2018 IPR013418 CRISPR-associated protein Csd2 TMO_2288 5f555f9d3aa82f677ac12a00a71b8374 263 Pfam PF00005 ABC transporter 21 163 1.0E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2288 5f555f9d3aa82f677ac12a00a71b8374 263 Gene3D G3DSA:3.40.50.300 2 235 2.7E-57 T 14-10-2018 TMO_2288 5f555f9d3aa82f677ac12a00a71b8374 263 SUPERFAMILY SSF52540 6 225 1.36E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2288 5f555f9d3aa82f677ac12a00a71b8374 263 SMART SM00382 30 211 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3101 1930d00ec1db531543c4bedebf619355 196 Pfam PF13563 2'-5' RNA ligase superfamily 15 162 3.5E-16 T 14-10-2018 TMO_3101 1930d00ec1db531543c4bedebf619355 196 SUPERFAMILY SSF55144 14 162 9.68E-12 T 14-10-2018 IPR009097 Cyclic phosphodiesterase TMO_3101 1930d00ec1db531543c4bedebf619355 196 Gene3D G3DSA:3.90.1140.10 4 175 1.2E-18 T 14-10-2018 TMO_0611 fb400dbd72066ceb60968670861709dd 423 SUPERFAMILY SSF103473 15 422 8.37E-56 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0611 fb400dbd72066ceb60968670861709dd 423 Gene3D G3DSA:1.20.1250.20 11 211 1.0E-23 T 14-10-2018 TMO_0611 fb400dbd72066ceb60968670861709dd 423 Gene3D G3DSA:1.20.1250.20 218 422 6.7E-19 T 14-10-2018 TMO_0611 fb400dbd72066ceb60968670861709dd 423 Pfam PF07690 Major Facilitator Superfamily 26 348 1.2E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_2409 9d211bc028608dc1ba711186051c09d1 367 Gene3D G3DSA:1.10.620.20 28 334 9.9E-74 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 TMO_2409 9d211bc028608dc1ba711186051c09d1 367 Pfam PF00268 Ribonucleotide reductase, small chain 30 291 9.5E-64 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_2409 9d211bc028608dc1ba711186051c09d1 367 PIRSF PIRSF000355 14 343 1.2E-89 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_2409 9d211bc028608dc1ba711186051c09d1 367 SUPERFAMILY SSF47240 30 334 2.92E-76 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_2076 3237e1ef3f322d905daa26927a44cb3c 190 SUPERFAMILY SSF109604 34 110 2.55E-6 T 14-10-2018 TMO_2076 3237e1ef3f322d905daa26927a44cb3c 190 Gene3D G3DSA:1.10.3210.10 6 189 9.0E-47 T 14-10-2018 TMO_2076 3237e1ef3f322d905daa26927a44cb3c 190 Pfam PF01966 HD domain 34 111 2.9E-5 T 14-10-2018 IPR006674 HD domain TMO_3527 b7bba9e36c4c72ed48e64e6179015589 140 Pfam PF05443 ROS/MUCR transcriptional regulator protein 9 132 7.9E-52 T 14-10-2018 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 TMO_3527 b7bba9e36c4c72ed48e64e6179015589 140 Gene3D G3DSA:1.10.10.1550 59 115 1.0E-30 T 14-10-2018 TMO_3526 db64714e1edc3147ccd4d40ce2ce690a 158 Pfam PF00583 Acetyltransferase (GNAT) family 28 128 7.9E-15 T 14-10-2018 IPR000182 GNAT domain TMO_3526 db64714e1edc3147ccd4d40ce2ce690a 158 SUPERFAMILY SSF55729 6 155 1.89E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_3526 db64714e1edc3147ccd4d40ce2ce690a 158 Gene3D G3DSA:3.40.630.30 6 156 1.1E-34 T 14-10-2018 TMO_0957 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 Gene3D G3DSA:1.10.287.470 106 197 1.8E-75 T 14-10-2018 TMO_0957 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 Gene3D G3DSA:2.40.420.20 56 371 1.8E-75 T 14-10-2018 TMO_0957 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 306 4.3E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_0957 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 SUPERFAMILY SSF111369 62 251 3.4E-21 T 14-10-2018 TMO_0957 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 52 372 1.0E-46 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_0957 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 Gene3D G3DSA:2.40.50.100 72 234 1.8E-75 T 14-10-2018 TMO_0957 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 Gene3D G3DSA:2.40.30.170 61 313 1.8E-75 T 14-10-2018 TMO_b0043 46ebdfcc2bc162b1062289714b33fa4f 387 Gene3D G3DSA:1.10.10.2120 37 110 3.0E-88 T 14-10-2018 TMO_b0043 46ebdfcc2bc162b1062289714b33fa4f 387 Gene3D G3DSA:3.60.60.10 23 361 3.0E-88 T 14-10-2018 TMO_b0043 46ebdfcc2bc162b1062289714b33fa4f 387 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 138 355 5.9E-12 T 14-10-2018 IPR005079 Peptidase C45 TMO_c0272 9ab3b962f189e0bc642c1ea9dd7f46c2 288 SUPERFAMILY SSF103481 44 130 2.94E-7 T 14-10-2018 TMO_c0272 9ab3b962f189e0bc642c1ea9dd7f46c2 288 SUPERFAMILY SSF103481 184 284 2.22E-10 T 14-10-2018 TMO_c0272 9ab3b962f189e0bc642c1ea9dd7f46c2 288 Pfam PF00892 EamA-like transporter family 8 130 3.6E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_c0272 9ab3b962f189e0bc642c1ea9dd7f46c2 288 Pfam PF00892 EamA-like transporter family 150 281 2.2E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_2081 126c76594fb824a98f116c2682de10e5 212 Gene3D G3DSA:1.20.1250.20 1 203 3.4E-23 T 14-10-2018 TMO_2081 126c76594fb824a98f116c2682de10e5 212 SUPERFAMILY SSF103473 1 178 7.85E-25 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2081 126c76594fb824a98f116c2682de10e5 212 Pfam PF07690 Major Facilitator Superfamily 7 197 3.6E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_3524 c0fcc184fc9edfff2531fc674b0f21e7 185 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 1 176 28.373 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TMO_3524 c0fcc184fc9edfff2531fc674b0f21e7 185 Pfam PF01427 D-ala-D-ala dipeptidase 10 175 4.1E-45 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TMO_3524 c0fcc184fc9edfff2531fc674b0f21e7 185 SUPERFAMILY SSF55166 11 166 1.23E-54 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TMO_3524 c0fcc184fc9edfff2531fc674b0f21e7 185 PIRSF PIRSF026671 3 180 5.2E-53 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TMO_3524 c0fcc184fc9edfff2531fc674b0f21e7 185 Gene3D G3DSA:3.30.1380.10 2 170 8.0E-49 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TMO_1907 120311c2603f0e2e36d85279f4632ea8 254 Pfam PF01925 Sulfite exporter TauE/SafE 14 248 2.9E-35 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_2354 eb112eb398d89600027463917efaa4cd 212 Pfam PF01810 LysE type translocator 16 209 2.6E-30 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_2354 eb112eb398d89600027463917efaa4cd 212 PIRSF PIRSF006324 1 212 4.5E-49 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_0679 aec9f10d59dbd01b64a1d8167fd4b377 295 SUPERFAMILY SSF53474 13 276 7.97E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0679 aec9f10d59dbd01b64a1d8167fd4b377 295 Gene3D G3DSA:3.40.50.1820 29 289 1.9E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0679 aec9f10d59dbd01b64a1d8167fd4b377 295 Pfam PF07859 alpha/beta hydrolase fold 80 195 4.8E-13 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 TMO_b0177 bc00e8c6c11b2c29cfad5308e2a239a4 340 Gene3D G3DSA:3.40.190.10 38 305 3.9E-72 T 14-10-2018 TMO_b0177 bc00e8c6c11b2c29cfad5308e2a239a4 340 SUPERFAMILY SSF53850 38 322 8.32E-31 T 14-10-2018 TMO_b0177 bc00e8c6c11b2c29cfad5308e2a239a4 340 Pfam PF09084 NMT1/THI5 like 46 257 2.5E-55 T 14-10-2018 IPR015168 SsuA/THI5-like TMO_b0177 bc00e8c6c11b2c29cfad5308e2a239a4 340 Gene3D G3DSA:3.40.190.10 118 218 3.9E-72 T 14-10-2018 TMO_1636 290d5e634565ceea451a39745926a161 370 Gene3D G3DSA:3.40.50.2000 191 352 9.2E-23 T 14-10-2018 TMO_1636 290d5e634565ceea451a39745926a161 370 SUPERFAMILY SSF53756 11 351 3.9E-56 T 14-10-2018 TMO_1636 290d5e634565ceea451a39745926a161 370 Gene3D G3DSA:3.40.50.2000 11 183 7.0E-16 T 14-10-2018 TMO_1636 290d5e634565ceea451a39745926a161 370 Pfam PF13692 Glycosyl transferases group 1 200 312 1.6E-15 T 14-10-2018 TMO_1636 290d5e634565ceea451a39745926a161 370 Pfam PF13439 Glycosyltransferase Family 4 23 174 5.3E-14 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TMO_2062 faf649037ad841e3260ecabc5d7bcd5d 276 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 20 222 3.9E-61 T 14-10-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated TMO_2062 faf649037ad841e3260ecabc5d7bcd5d 276 Pfam PF00149 Calcineurin-like phosphoesterase 42 135 5.5E-4 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TMO_2062 faf649037ad841e3260ecabc5d7bcd5d 276 Gene3D G3DSA:3.60.21.10 41 182 1.3E-6 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like TMO_2062 faf649037ad841e3260ecabc5d7bcd5d 276 SUPERFAMILY SSF56300 42 178 1.5E-11 T 14-10-2018 TMO_c0389 73391b29a715d47c8a2f357373956b96 803 Gene3D G3DSA:1.10.3210.30 3 200 6.5E-10 T 14-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily TMO_c0389 73391b29a715d47c8a2f357373956b96 803 Pfam PF04851 Type III restriction enzyme, res subunit 263 412 6.7E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TMO_c0389 73391b29a715d47c8a2f357373956b96 803 SUPERFAMILY SSF52540 261 604 4.72E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0389 73391b29a715d47c8a2f357373956b96 803 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 19 194 2.0E-26 T 14-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain TMO_c0389 73391b29a715d47c8a2f357373956b96 803 SUPERFAMILY SSF109604 20 114 2.13E-5 T 14-10-2018 TMO_c0389 73391b29a715d47c8a2f357373956b96 803 Gene3D G3DSA:3.40.50.300 250 454 7.3E-15 T 14-10-2018 TMO_c0389 73391b29a715d47c8a2f357373956b96 803 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 270 620 3.9E-30 T 14-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core TMO_c0389 73391b29a715d47c8a2f357373956b96 803 SMART SM00487 242 474 0.001 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_c0389 73391b29a715d47c8a2f357373956b96 803 Gene3D G3DSA:3.40.50.300 484 639 3.6E-9 T 14-10-2018 TMO_a0024 2efcf5b8afa359ed25e19fe81665e746 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 1.9E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_a0024 2efcf5b8afa359ed25e19fe81665e746 281 SUPERFAMILY SSF161098 72 278 7.59E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0024 2efcf5b8afa359ed25e19fe81665e746 281 Gene3D G3DSA:1.10.3720.10 67 280 4.3E-18 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0217 53dd0a6dd3ff127ea164e6916fca5a80 373 Pfam PF12698 ABC-2 family transporter protein 30 365 2.0E-40 T 14-10-2018 TMO_2210 d4c965e43f53d36371d5b0adf9707fd5 107 Pfam PF05284 Protein of unknown function (DUF736) 3 101 4.7E-36 T 14-10-2018 IPR007948 Protein of unknown function DUF736 TMO_3035 de04d7a07b74f02e767d76b1e58f89f6 289 SUPERFAMILY SSF55120 3 233 1.92E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_3035 de04d7a07b74f02e767d76b1e58f89f6 289 Gene3D G3DSA:3.30.2350.10 8 232 1.6E-62 T 14-10-2018 TMO_3035 de04d7a07b74f02e767d76b1e58f89f6 289 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 56 70 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_3035 de04d7a07b74f02e767d76b1e58f89f6 289 Pfam PF00849 RNA pseudouridylate synthase 17 165 3.6E-33 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_2685 2e83bd06c97379095c9c0aff0754f94c 321 Pfam PF00293 NUDIX domain 191 298 7.7E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_2685 2e83bd06c97379095c9c0aff0754f94c 321 Gene3D G3DSA:3.90.79.10 188 320 1.6E-36 T 14-10-2018 TMO_2685 2e83bd06c97379095c9c0aff0754f94c 321 Gene3D G3DSA:3.90.79.20 43 186 1.1E-13 T 14-10-2018 TMO_2685 2e83bd06c97379095c9c0aff0754f94c 321 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 155 185 5.0E-11 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 TMO_2685 2e83bd06c97379095c9c0aff0754f94c 321 ProSitePatterns PS00893 Nudix box signature. 220 241 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_2685 2e83bd06c97379095c9c0aff0754f94c 321 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 40 152 3.2E-9 T 14-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 TMO_2685 2e83bd06c97379095c9c0aff0754f94c 321 SUPERFAMILY SSF55811 138 318 3.38E-44 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TMO_c0876 62cd6a3f4ec058b44a8ac5c79867ee6c 280 SUPERFAMILY SSF56529 60 278 8.77E-79 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_c0876 62cd6a3f4ec058b44a8ac5c79867ee6c 280 Gene3D G3DSA:3.90.850.10 67 280 6.4E-82 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_c0876 62cd6a3f4ec058b44a8ac5c79867ee6c 280 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 73 277 7.0E-68 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 TMO_1706 9003fcfcd88480b50ab02b790264799a 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 14 319 1.7E-97 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 TMO_1706 9003fcfcd88480b50ab02b790264799a 332 PIRSF PIRSF006621 4 327 1.5E-94 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_1706 9003fcfcd88480b50ab02b790264799a 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 97 115 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_1706 9003fcfcd88480b50ab02b790264799a 332 SUPERFAMILY SSF51395 13 319 5.49E-81 T 14-10-2018 TMO_1706 9003fcfcd88480b50ab02b790264799a 332 Gene3D G3DSA:3.20.20.70 11 248 5.9E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1706 9003fcfcd88480b50ab02b790264799a 332 Pfam PF01207 Dihydrouridine synthase (Dus) 17 317 1.4E-91 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_2494 07f43ff1b2ec9121386bf80fbae44639 729 Pfam PF00672 HAMP domain 386 433 4.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_2494 07f43ff1b2ec9121386bf80fbae44639 729 SMART SM00283 477 724 2.0E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2494 07f43ff1b2ec9121386bf80fbae44639 729 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 532 694 8.9E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2494 07f43ff1b2ec9121386bf80fbae44639 729 SUPERFAMILY SSF58104 406 723 1.7E-63 T 14-10-2018 TMO_2494 07f43ff1b2ec9121386bf80fbae44639 729 Gene3D G3DSA:3.30.450.20 78 241 2.6E-50 T 14-10-2018 TMO_2494 07f43ff1b2ec9121386bf80fbae44639 729 Gene3D G3DSA:3.30.450.20 66 340 2.6E-50 T 14-10-2018 TMO_2494 07f43ff1b2ec9121386bf80fbae44639 729 Gene3D G3DSA:1.20.1480.50 345 440 2.5E-12 T 14-10-2018 TMO_2494 07f43ff1b2ec9121386bf80fbae44639 729 Gene3D G3DSA:1.10.287.950 441 728 4.6E-54 T 14-10-2018 TMO_2494 07f43ff1b2ec9121386bf80fbae44639 729 Pfam PF02743 Cache domain 56 336 1.1E-16 T 14-10-2018 IPR033479 Double Cache domain 1 TMO_2494 07f43ff1b2ec9121386bf80fbae44639 729 SMART SM00304 384 436 2.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_0441 6e60fc59c3c8ab446661719b601e0c83 305 Pfam PF00561 alpha/beta hydrolase fold 53 175 9.5E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0441 6e60fc59c3c8ab446661719b601e0c83 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 1.3E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0441 6e60fc59c3c8ab446661719b601e0c83 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 78 93 1.3E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0441 6e60fc59c3c8ab446661719b601e0c83 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 138 151 1.3E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0441 6e60fc59c3c8ab446661719b601e0c83 305 SUPERFAMILY SSF53474 32 290 1.31E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0441 6e60fc59c3c8ab446661719b601e0c83 305 Gene3D G3DSA:3.40.50.1820 2 300 4.8E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1546 b8c5a732fe7bed6213a0a33d3aad0446 131 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 1.9E-18 T 14-10-2018 IPR003849 Preprotein translocase YajC TMO_1546 b8c5a732fe7bed6213a0a33d3aad0446 131 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 1.9E-18 T 14-10-2018 IPR003849 Preprotein translocase YajC TMO_1546 b8c5a732fe7bed6213a0a33d3aad0446 131 SMART SM01323 18 101 5.0E-48 T 14-10-2018 IPR003849 Preprotein translocase YajC TMO_1546 b8c5a732fe7bed6213a0a33d3aad0446 131 Pfam PF02699 Preprotein translocase subunit 21 98 1.5E-31 T 14-10-2018 IPR003849 Preprotein translocase YajC TMO_1546 b8c5a732fe7bed6213a0a33d3aad0446 131 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 2.3E-30 T 14-10-2018 IPR003849 Preprotein translocase YajC TMO_b0021 77d0dd743acd0c60a8e28270004df4b1 254 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 16 195 6.0E-50 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_b0021 77d0dd743acd0c60a8e28270004df4b1 254 SUPERFAMILY SSF53639 10 218 4.51E-62 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_b0021 77d0dd743acd0c60a8e28270004df4b1 254 SMART SM01007 15 195 9.1E-64 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_b0021 77d0dd743acd0c60a8e28270004df4b1 254 Gene3D G3DSA:3.40.225.10 4 254 2.9E-79 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_2122 1414ab67fd55cd5ec790ed668a6970c4 233 Gene3D G3DSA:1.20.1050.10 98 206 4.2E-19 T 14-10-2018 TMO_2122 1414ab67fd55cd5ec790ed668a6970c4 233 SUPERFAMILY SSF47616 95 216 4.97E-22 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_2122 1414ab67fd55cd5ec790ed668a6970c4 233 Gene3D G3DSA:3.40.30.10 69 208 4.2E-19 T 14-10-2018 TMO_2122 1414ab67fd55cd5ec790ed668a6970c4 233 Pfam PF13410 Glutathione S-transferase, C-terminal domain 139 195 1.9E-6 T 14-10-2018 TMO_c0588 e59df8d34d1d4c9b3c49e659422f0039 110 PRINTS PR00355 Adrenodoxin signature 58 72 1.6E-11 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 TMO_c0588 e59df8d34d1d4c9b3c49e659422f0039 110 PRINTS PR00355 Adrenodoxin signature 81 89 1.6E-11 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 TMO_c0588 e59df8d34d1d4c9b3c49e659422f0039 110 PRINTS PR00355 Adrenodoxin signature 39 49 1.6E-11 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 TMO_c0588 e59df8d34d1d4c9b3c49e659422f0039 110 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 39 49 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 TMO_c0588 e59df8d34d1d4c9b3c49e659422f0039 110 Gene3D G3DSA:3.10.20.30 2 109 2.8E-43 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_c0588 e59df8d34d1d4c9b3c49e659422f0039 110 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 90 8.5E-15 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_c0588 e59df8d34d1d4c9b3c49e659422f0039 110 SUPERFAMILY SSF54292 1 101 5.44E-34 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 Gene3D G3DSA:1.20.200.10 133 461 1.0E-187 T 14-10-2018 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 Hamap MF_00006 Argininosuccinate lyase [argH]. 16 468 43.203 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 Gene3D G3DSA:1.10.40.30 374 447 1.0E-187 T 14-10-2018 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 Pfam PF00206 Lyase 21 314 4.1E-80 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 SUPERFAMILY SSF48557 17 468 6.44E-150 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 324 343 2.4E-68 T 14-10-2018 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 156 176 2.4E-68 T 14-10-2018 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 207 223 2.4E-68 T 14-10-2018 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 289 305 2.4E-68 T 14-10-2018 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 115 137 2.4E-68 T 14-10-2018 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 245 269 2.4E-68 T 14-10-2018 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 ProSitePatterns PS00163 Fumarate lyases signature. 289 298 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 Gene3D G3DSA:1.10.275.10 39 243 1.0E-187 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00149 Fumarate lyase superfamily signature 161 179 1.6E-31 T 14-10-2018 IPR000362 Fumarate lyase family TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00149 Fumarate lyase superfamily signature 116 134 1.6E-31 T 14-10-2018 IPR000362 Fumarate lyase family TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00149 Fumarate lyase superfamily signature 289 305 1.6E-31 T 14-10-2018 IPR000362 Fumarate lyase family TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00149 Fumarate lyase superfamily signature 245 272 1.6E-31 T 14-10-2018 IPR000362 Fumarate lyase family TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 TIGRFAM TIGR00838 argH: argininosuccinate lyase 17 469 9.0E-182 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TMO_0127 5d1c8746b0ad9cf9db1992913598b3e9 471 Pfam PF14698 Argininosuccinate lyase C-terminal 377 445 1.7E-21 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TMO_2292 747da92d320895a42d4fdc748037bef6 268 SUPERFAMILY SSF53335 34 156 6.14E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_2292 747da92d320895a42d4fdc748037bef6 268 Gene3D G3DSA:3.40.50.150 29 240 2.4E-9 T 14-10-2018 TMO_2128 4b6c857d509d700c6733e8f22eaff501 367 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 93 331 9.3E-23 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_2128 4b6c857d509d700c6733e8f22eaff501 367 Gene3D G3DSA:3.40.190.170 31 347 1.5E-56 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_a0227 48c43814bb7222d86f59a97c73b90507 393 Gene3D G3DSA:3.40.50.2300 52 359 9.9E-75 T 14-10-2018 TMO_a0227 48c43814bb7222d86f59a97c73b90507 393 Gene3D G3DSA:3.40.50.2300 148 366 9.9E-75 T 14-10-2018 TMO_a0227 48c43814bb7222d86f59a97c73b90507 393 SUPERFAMILY SSF53822 32 370 1.03E-75 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_a0227 48c43814bb7222d86f59a97c73b90507 393 Pfam PF13458 Periplasmic binding protein 33 359 1.5E-66 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_a0137 d51b5aa6767d2b07b48d4d71f6b91644 276 SUPERFAMILY SSF54593 1 141 5.64E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_a0137 d51b5aa6767d2b07b48d4d71f6b91644 276 Pfam PF13468 Glyoxalase-like domain 9 188 9.7E-10 T 14-10-2018 IPR025870 Glyoxalase-like domain TMO_a0137 d51b5aa6767d2b07b48d4d71f6b91644 276 Gene3D G3DSA:3.10.180.10 1 131 1.9E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_1185 0fead5fb361980541f110d5ea26f5b90 524 Gene3D G3DSA:3.90.76.10 71 193 1.3E-113 T 14-10-2018 TMO_1185 0fead5fb361980541f110d5ea26f5b90 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 409 6.9E-67 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_1185 0fead5fb361980541f110d5ea26f5b90 524 PIRSF PIRSF002741 32 518 2.5E-57 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_1185 0fead5fb361980541f110d5ea26f5b90 524 Gene3D G3DSA:3.10.105.10 294 502 1.3E-113 T 14-10-2018 TMO_1185 0fead5fb361980541f110d5ea26f5b90 524 Gene3D G3DSA:3.40.190.10 44 292 1.3E-113 T 14-10-2018 TMO_1185 0fead5fb361980541f110d5ea26f5b90 524 SUPERFAMILY SSF53850 39 516 5.07E-92 T 14-10-2018 TMO_0891 e3368f694ce171769c1be739790dc4e4 268 Pfam PF01381 Helix-turn-helix 18 60 2.1E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_0891 e3368f694ce171769c1be739790dc4e4 268 SUPERFAMILY SSF47413 5 64 3.94E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0891 e3368f694ce171769c1be739790dc4e4 268 Gene3D G3DSA:1.10.260.40 2 64 8.2E-9 T 14-10-2018 TMO_0891 e3368f694ce171769c1be739790dc4e4 268 SMART SM00530 7 61 4.2E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_1639 f40eb40d025b948b034b7ab6b1d5bd5f 68 SMART SM00357 3 67 1.1E-23 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 TMO_1639 f40eb40d025b948b034b7ab6b1d5bd5f 68 SUPERFAMILY SSF50249 1 66 5.57E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_1639 f40eb40d025b948b034b7ab6b1d5bd5f 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site TMO_1639 f40eb40d025b948b034b7ab6b1d5bd5f 68 Gene3D G3DSA:2.40.50.140 1 65 2.9E-25 T 14-10-2018 TMO_1639 f40eb40d025b948b034b7ab6b1d5bd5f 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.2E-24 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_1639 f40eb40d025b948b034b7ab6b1d5bd5f 68 PIRSF PIRSF002599 1 68 4.8E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 TMO_1639 f40eb40d025b948b034b7ab6b1d5bd5f 68 PRINTS PR00050 Cold shock protein signature 4 19 1.8E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_1639 f40eb40d025b948b034b7ab6b1d5bd5f 68 PRINTS PR00050 Cold shock protein signature 25 34 1.8E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_1639 f40eb40d025b948b034b7ab6b1d5bd5f 68 PRINTS PR00050 Cold shock protein signature 40 58 1.8E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_0345 3db1406e1f3da9b8e22fb3c9e5ddb049 184 Gene3D G3DSA:3.40.50.300 1 176 1.7E-54 T 14-10-2018 TMO_0345 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PRINTS PR01100 Shikimate kinase family signature 6 21 3.7E-20 T 14-10-2018 TMO_0345 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PRINTS PR01100 Shikimate kinase family signature 30 43 3.7E-20 T 14-10-2018 TMO_0345 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PRINTS PR01100 Shikimate kinase family signature 76 85 3.7E-20 T 14-10-2018 TMO_0345 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PRINTS PR01100 Shikimate kinase family signature 58 66 3.7E-20 T 14-10-2018 TMO_0345 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PRINTS PR01100 Shikimate kinase family signature 97 114 3.7E-20 T 14-10-2018 TMO_0345 3db1406e1f3da9b8e22fb3c9e5ddb049 184 Hamap MF_00109 Shikimate kinase [aroK]. 3 169 27.765 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TMO_0345 3db1406e1f3da9b8e22fb3c9e5ddb049 184 Pfam PF01202 Shikimate kinase 12 168 2.1E-45 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TMO_0345 3db1406e1f3da9b8e22fb3c9e5ddb049 184 SUPERFAMILY SSF52540 4 168 7.54E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0345 3db1406e1f3da9b8e22fb3c9e5ddb049 184 ProSitePatterns PS01128 Shikimate kinase signature. 59 84 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TMO_2211 f5cd5e560a767704761fa2f97721dbe8 1088 Gene3D G3DSA:3.20.20.140 1 249 6.0E-63 T 14-10-2018 TMO_2211 f5cd5e560a767704761fa2f97721dbe8 1088 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1088 13.276 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_2211 f5cd5e560a767704761fa2f97721dbe8 1088 Pfam PF01336 OB-fold nucleic acid binding domain 948 1021 5.8E-9 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TMO_2211 f5cd5e560a767704761fa2f97721dbe8 1088 SMART SM00481 4 71 7.1E-10 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TMO_2211 f5cd5e560a767704761fa2f97721dbe8 1088 Gene3D G3DSA:2.40.50.140 935 1021 3.3E-6 T 14-10-2018 TMO_2211 f5cd5e560a767704761fa2f97721dbe8 1088 SUPERFAMILY SSF89550 10 243 3.92E-6 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TMO_2211 f5cd5e560a767704761fa2f97721dbe8 1088 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 272 695 7.6E-140 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_2211 f5cd5e560a767704761fa2f97721dbe8 1088 Pfam PF02811 PHP domain 5 128 2.8E-10 T 14-10-2018 IPR004013 PHP domain GO:0003824 TMO_2211 f5cd5e560a767704761fa2f97721dbe8 1088 Pfam PF14579 Helix-hairpin-helix motif 768 859 2.2E-22 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_2211 f5cd5e560a767704761fa2f97721dbe8 1088 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 983 1.0E-152 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_0775 6d3b417006dfc7500bc2642a6f611eb0 248 Pfam PF00717 Peptidase S24-like 159 224 3.6E-8 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TMO_0775 6d3b417006dfc7500bc2642a6f611eb0 248 Gene3D G3DSA:1.10.260.40 1 66 2.5E-16 T 14-10-2018 TMO_0775 6d3b417006dfc7500bc2642a6f611eb0 248 SMART SM00530 6 61 3.8E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_0775 6d3b417006dfc7500bc2642a6f611eb0 248 SUPERFAMILY SSF47413 2 65 4.79E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0775 6d3b417006dfc7500bc2642a6f611eb0 248 Gene3D G3DSA:2.10.109.10 129 244 4.0E-10 T 14-10-2018 TMO_0775 6d3b417006dfc7500bc2642a6f611eb0 248 Pfam PF13560 Helix-turn-helix domain 6 61 2.2E-11 T 14-10-2018 TMO_0775 6d3b417006dfc7500bc2642a6f611eb0 248 SUPERFAMILY SSF51306 119 241 2.49E-13 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TMO_2516 2f6528d08bc26ccff96963db22b124e5 425 Pfam PF07995 Glucose / Sorbosone dehydrogenase 228 340 1.1E-11 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase TMO_2516 2f6528d08bc26ccff96963db22b124e5 425 SUPERFAMILY SSF50952 64 423 2.62E-36 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 TMO_2516 2f6528d08bc26ccff96963db22b124e5 425 Gene3D G3DSA:2.120.10.30 73 364 5.5E-18 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TMO_0257 8aff0dae08799f36cbfa9862b9eef962 416 SUPERFAMILY SSF103473 32 408 1.57E-27 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0257 8aff0dae08799f36cbfa9862b9eef962 416 Gene3D G3DSA:1.20.1250.20 223 414 1.3E-7 T 14-10-2018 TMO_0257 8aff0dae08799f36cbfa9862b9eef962 416 Pfam PF07690 Major Facilitator Superfamily 50 344 3.7E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0257 8aff0dae08799f36cbfa9862b9eef962 416 Gene3D G3DSA:1.20.1250.20 13 201 9.7E-10 T 14-10-2018 TMO_1059 829048b1bdb6174154670309492fbdc8 707 SUPERFAMILY SSF102114 241 469 2.49E-39 T 14-10-2018 TMO_1059 829048b1bdb6174154670309492fbdc8 707 Pfam PF04055 Radical SAM superfamily 257 425 1.1E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_1059 829048b1bdb6174154670309492fbdc8 707 Gene3D G3DSA:3.80.30.20 253 470 2.3E-23 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TMO_1059 829048b1bdb6174154670309492fbdc8 707 Pfam PF02310 B12 binding domain 107 179 1.8E-7 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TMO_1059 829048b1bdb6174154670309492fbdc8 707 SMART SM00729 252 470 3.7E-27 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TMO_2296 38bbcdb292a78fc22060759a1da54268 234 Pfam PF08811 Protein of unknown function (DUF1800) 2 232 4.8E-44 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 TMO_c0760 f2770e663d3d28b1d13bb2d73e31f4db 149 Pfam PF02082 Transcriptional regulator 1 80 4.9E-23 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type TMO_c0760 f2770e663d3d28b1d13bb2d73e31f4db 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.0E-35 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type TMO_c0760 f2770e663d3d28b1d13bb2d73e31f4db 149 Gene3D G3DSA:1.10.10.10 1 138 6.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0760 f2770e663d3d28b1d13bb2d73e31f4db 149 SUPERFAMILY SSF46785 2 132 2.29E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2251 caccf58d22cc6edac90bd078e1025de8 382 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 172 346 5.5E-12 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_2251 caccf58d22cc6edac90bd078e1025de8 382 SUPERFAMILY SSF55073 160 362 6.75E-35 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_2251 caccf58d22cc6edac90bd078e1025de8 382 Gene3D G3DSA:3.30.70.1230 162 357 1.3E-27 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_b0252 358dfe91bfd23b4fd35854e6b295b9e1 175 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 163 5.0E-15 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_1798 eb87bbdb7c4784229946f60fd7e04e67 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1798 eb87bbdb7c4784229946f60fd7e04e67 283 Gene3D G3DSA:3.40.190.10 96 260 2.9E-38 T 14-10-2018 TMO_1798 eb87bbdb7c4784229946f60fd7e04e67 283 Gene3D G3DSA:3.40.190.10 162 254 2.9E-38 T 14-10-2018 TMO_1798 eb87bbdb7c4784229946f60fd7e04e67 283 Gene3D G3DSA:1.10.10.10 3 90 1.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1798 eb87bbdb7c4784229946f60fd7e04e67 283 Pfam PF03466 LysR substrate binding domain 88 280 5.4E-25 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1798 eb87bbdb7c4784229946f60fd7e04e67 283 SUPERFAMILY SSF46785 4 112 4.24E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1798 eb87bbdb7c4784229946f60fd7e04e67 283 SUPERFAMILY SSF53850 83 281 8.42E-26 T 14-10-2018 TMO_b0355 dd40bf7616a3abd0dcfd3f8750d6844a 130 Pfam PF14552 Tautomerase enzyme 38 119 7.9E-30 T 14-10-2018 IPR037479 Tautomerase, MSAD family TMO_b0355 dd40bf7616a3abd0dcfd3f8750d6844a 130 SUPERFAMILY SSF55331 2 126 1.01E-40 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily TMO_b0355 dd40bf7616a3abd0dcfd3f8750d6844a 130 Gene3D G3DSA:3.30.429.10 1 129 4.0E-44 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily TMO_2465 8a9342cc3d5b16893d61046498490455 308 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 16 287 8.6E-50 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region TMO_2465 8a9342cc3d5b16893d61046498490455 308 SUPERFAMILY SSF63829 5 303 2.62E-58 T 14-10-2018 TMO_2465 8a9342cc3d5b16893d61046498490455 308 Gene3D G3DSA:2.120.10.30 1 306 1.4E-60 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TMO_c0303 bdaad82ef297ff6dc798e6c8010af90e 1170 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 737 924 5.7E-21 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TMO_c0303 bdaad82ef297ff6dc798e6c8010af90e 1170 SUPERFAMILY SSF52518 443 628 2.21E-15 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_c0303 bdaad82ef297ff6dc798e6c8010af90e 1170 SUPERFAMILY SSF52518 17 207 2.3E-17 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_c0303 bdaad82ef297ff6dc798e6c8010af90e 1170 Gene3D G3DSA:3.40.50.970 448 631 2.1E-5 T 14-10-2018 TMO_c0303 bdaad82ef297ff6dc798e6c8010af90e 1170 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 463 612 7.0E-8 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_c0303 bdaad82ef297ff6dc798e6c8010af90e 1170 SUPERFAMILY SSF53323 729 958 3.27E-27 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TMO_c0303 bdaad82ef297ff6dc798e6c8010af90e 1170 Gene3D G3DSA:3.40.920.10 726 931 3.1E-16 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TMO_c0303 bdaad82ef297ff6dc798e6c8010af90e 1170 SUPERFAMILY SSF52922 276 402 1.73E-8 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TMO_c0303 bdaad82ef297ff6dc798e6c8010af90e 1170 Gene3D G3DSA:3.40.50.970 6 228 4.1E-25 T 14-10-2018 TMO_1242 526fbc7af799fbf491b775051290a756 255 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site TMO_1242 526fbc7af799fbf491b775051290a756 255 Pfam PF01618 MotA/TolQ/ExbB proton channel family 106 214 2.5E-21 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TMO_c0052 a5cacc31099365caca140db7ea2870c8 855 Gene3D G3DSA:3.40.50.300 439 696 2.7E-11 T 14-10-2018 TMO_c0052 a5cacc31099365caca140db7ea2870c8 855 Gene3D G3DSA:3.40.50.300 63 262 1.6E-12 T 14-10-2018 TMO_c0052 a5cacc31099365caca140db7ea2870c8 855 SUPERFAMILY SSF52540 63 687 1.69E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0052 a5cacc31099365caca140db7ea2870c8 855 Pfam PF13476 AAA domain 72 150 1.9E-9 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 SUPERFAMILY SSF49493 195 270 1.09E-17 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 SUPERFAMILY SSF49493 118 203 3.4E-21 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 Gene3D G3DSA:1.10.287.110 1 102 2.7E-21 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 Gene3D G3DSA:2.60.260.20 119 188 2.4E-18 T 14-10-2018 TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 SUPERFAMILY SSF46565 1 89 8.64E-21 T 14-10-2018 IPR036869 Chaperone J-domain superfamily TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 Pfam PF00226 DnaJ domain 1 56 2.8E-18 T 14-10-2018 IPR001623 DnaJ domain TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 Pfam PF01556 DnaJ C terminal domain 124 268 1.0E-31 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 Gene3D G3DSA:2.60.260.20 190 268 3.4E-26 T 14-10-2018 TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 PRINTS PR00625 DnaJ domain signature 31 51 2.3E-9 T 14-10-2018 IPR001623 DnaJ domain TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 PRINTS PR00625 DnaJ domain signature 14 29 2.3E-9 T 14-10-2018 IPR001623 DnaJ domain TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 SMART SM00271 1 51 9.5E-15 T 14-10-2018 IPR001623 DnaJ domain TMO_0986 4a43e0bf4a0c25028cb8db3d3b04e252 298 ProSitePatterns PS00636 Nt-dnaJ domain signature. 36 55 - T 14-10-2018 IPR018253 DnaJ domain, conserved site TMO_a0536 ef463947105e063380fbbafab550253d 321 Gene3D G3DSA:1.20.1530.20 7 309 1.6E-11 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily TMO_a0300 0b2e54f2e1dbf051048722644c4c1d00 410 SUPERFAMILY SSF89796 13 406 1.44E-129 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_a0300 0b2e54f2e1dbf051048722644c4c1d00 410 Pfam PF02515 CoA-transferase family III 15 381 7.1E-125 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_a0300 0b2e54f2e1dbf051048722644c4c1d00 410 Gene3D G3DSA:3.40.50.10540 14 400 4.0E-136 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_a0300 0b2e54f2e1dbf051048722644c4c1d00 410 Gene3D G3DSA:3.30.1540.10 240 333 4.0E-136 T 14-10-2018 TMO_0746 31ec4ba6253080a8c286df1e84f7f0cb 399 SUPERFAMILY SSF53187 125 374 1.15E-47 T 14-10-2018 TMO_0746 31ec4ba6253080a8c286df1e84f7f0cb 399 Pfam PF00246 Zinc carboxypeptidase 149 250 1.1E-13 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 TMO_0746 31ec4ba6253080a8c286df1e84f7f0cb 399 Gene3D G3DSA:2.60.40.3120 13 131 2.4E-33 T 14-10-2018 TMO_0746 31ec4ba6253080a8c286df1e84f7f0cb 399 Gene3D G3DSA:3.40.630.10 133 394 1.4E-53 T 14-10-2018 TMO_0700 361ca77e6f16676b2838ec21410a88ee 446 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 436 9.3E-84 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_0700 361ca77e6f16676b2838ec21410a88ee 446 PIRSF PIRSF006066 5 446 1.4E-86 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0700 361ca77e6f16676b2838ec21410a88ee 446 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 442 2.0E-86 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0424 64e61f31812647bc54c9b00260b5b191 689 SUPERFAMILY SSF56935 21 689 9.16E-117 T 14-10-2018 TMO_0424 64e61f31812647bc54c9b00260b5b191 689 Pfam PF00593 TonB dependent receptor 242 688 4.6E-49 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_0424 64e61f31812647bc54c9b00260b5b191 689 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 164 8.7E-19 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_0424 64e61f31812647bc54c9b00260b5b191 689 Gene3D G3DSA:2.40.170.20 174 689 1.4E-104 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_0424 64e61f31812647bc54c9b00260b5b191 689 Gene3D G3DSA:2.170.130.10 38 173 6.5E-32 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_0424 64e61f31812647bc54c9b00260b5b191 689 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 689 1.6E-99 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_3239 d99f4eb5a3fbb80da323b149311e47b7 781 Gene3D G3DSA:3.30.70.1230 234 436 4.4E-38 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_3239 d99f4eb5a3fbb80da323b149311e47b7 781 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 248 420 2.3E-11 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_3239 d99f4eb5a3fbb80da323b149311e47b7 781 SMART SM00044 211 417 0.0068 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_3239 d99f4eb5a3fbb80da323b149311e47b7 781 SUPERFAMILY SSF55073 239 427 2.67E-38 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_b0063 aa2d798ea1d4c83f0f28a5f385cf1189 133 Pfam PF12680 SnoaL-like domain 18 114 3.6E-7 T 14-10-2018 IPR037401 SnoaL-like domain TMO_b0063 aa2d798ea1d4c83f0f28a5f385cf1189 133 Gene3D G3DSA:3.10.450.50 13 120 2.1E-19 T 14-10-2018 TMO_b0063 aa2d798ea1d4c83f0f28a5f385cf1189 133 SUPERFAMILY SSF54427 16 114 1.32E-12 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_0704 1e82046454105bcdb94aab50395d9e8a 282 SUPERFAMILY SSF161098 22 270 1.87E-52 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0704 1e82046454105bcdb94aab50395d9e8a 282 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 22 275 3.1E-88 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 TMO_0704 1e82046454105bcdb94aab50395d9e8a 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 273 8.4E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0704 1e82046454105bcdb94aab50395d9e8a 282 Gene3D G3DSA:1.10.3720.10 22 279 4.7E-64 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0704 1e82046454105bcdb94aab50395d9e8a 282 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 16 278 2.5E-112 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 TMO_b0013 69ed81470087f8cad6a0e856ae07356b 298 PIRSF PIRSF020481 4 288 8.7E-80 T 14-10-2018 IPR014507 Baseplate assembly protein J, predicted TMO_b0013 69ed81470087f8cad6a0e856ae07356b 298 Pfam PF04865 Baseplate J-like protein 100 249 6.5E-17 T 14-10-2018 IPR006949 Baseplate protein J-like TMO_0488 24bc84e8af0128fc4a3559ae3ba07dda 144 Gene3D G3DSA:3.10.129.10 3 141 1.8E-28 T 14-10-2018 TMO_0488 24bc84e8af0128fc4a3559ae3ba07dda 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 24 122 3.4E-12 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_0488 24bc84e8af0128fc4a3559ae3ba07dda 144 SUPERFAMILY SSF54637 4 140 2.91E-26 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0488 24bc84e8af0128fc4a3559ae3ba07dda 144 Pfam PF03061 Thioesterase superfamily 53 125 7.8E-10 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_1685 9c519c25439ac3017dc43d8d07a246a1 113 Pfam PF06803 Protein of unknown function (DUF1232) 33 69 7.9E-13 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 TMO_b0427 4c80469b5d5f1ec77a3a7cf5cecdf421 119 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 8 100 3.4E-8 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_b0427 4c80469b5d5f1ec77a3a7cf5cecdf421 119 Gene3D G3DSA:3.40.190.170 2 118 1.1E-15 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_1360 c840c40d1c671818e0bfdb2f54d06549 244 Gene3D G3DSA:3.30.70.2970 51 168 2.6E-14 T 14-10-2018 TMO_1360 c840c40d1c671818e0bfdb2f54d06549 244 PIRSF PIRSF029033 4 244 5.4E-61 T 14-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein TMO_1360 c840c40d1c671818e0bfdb2f54d06549 244 Gene3D G3DSA:3.30.110.170 41 209 2.6E-14 T 14-10-2018 TMO_1360 c840c40d1c671818e0bfdb2f54d06549 244 Pfam PF04402 Protein of unknown function (DUF541) 39 233 7.5E-20 T 14-10-2018 IPR007497 Protein of unknown function DUF541 TMO_2781 7388b13ff4db6d4045c7aab7659a2e24 167 Hamap MF_01398 ATP synthase subunit b [atpF]. 7 144 11.638 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TMO_2781 7388b13ff4db6d4045c7aab7659a2e24 167 Pfam PF00430 ATP synthase B/B' CF(0) 13 141 3.0E-18 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TMO_2867 37b9fd0a396ee7f76bd69e25d6aaf35e 294 Pfam PF00529 HlyD membrane-fusion protein of T1SS 218 268 4.1E-10 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_2867 37b9fd0a396ee7f76bd69e25d6aaf35e 294 SUPERFAMILY SSF111369 116 216 2.62E-13 T 14-10-2018 TMO_2867 37b9fd0a396ee7f76bd69e25d6aaf35e 294 Gene3D G3DSA:2.40.30.170 157 277 2.1E-35 T 14-10-2018 TMO_2867 37b9fd0a396ee7f76bd69e25d6aaf35e 294 Gene3D G3DSA:1.10.287.470 36 108 8.6E-10 T 14-10-2018 TMO_2867 37b9fd0a396ee7f76bd69e25d6aaf35e 294 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 75 217 5.5E-13 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_2867 37b9fd0a396ee7f76bd69e25d6aaf35e 294 SUPERFAMILY SSF111369 45 102 7.32E-5 T 14-10-2018 TMO_3334 dcd6a89f489cedb5203996bf38c1d41d 426 PIRSF PIRSF001434 28 426 6.2E-127 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_3334 dcd6a89f489cedb5203996bf38c1d41d 426 Gene3D G3DSA:3.90.1150.10 292 426 7.9E-48 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_3334 dcd6a89f489cedb5203996bf38c1d41d 426 Gene3D G3DSA:3.40.640.10 39 289 4.2E-82 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_3334 dcd6a89f489cedb5203996bf38c1d41d 426 SUPERFAMILY SSF53383 65 424 3.23E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_3334 dcd6a89f489cedb5203996bf38c1d41d 426 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 42 423 8.9E-176 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 TMO_3334 dcd6a89f489cedb5203996bf38c1d41d 426 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 43 423 1.1E-128 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TMO_3334 dcd6a89f489cedb5203996bf38c1d41d 426 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 43 424 55.011 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 TMO_1017 e8fe30d0330cbb88a1f526c13c43922c 445 SUPERFAMILY SSF51569 18 306 2.56E-78 T 14-10-2018 TMO_1017 e8fe30d0330cbb88a1f526c13c43922c 445 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 30 46 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_1017 e8fe30d0330cbb88a1f526c13c43922c 445 Pfam PF00682 HMGL-like 23 280 3.5E-71 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_1017 e8fe30d0330cbb88a1f526c13c43922c 445 Gene3D G3DSA:3.20.20.70 12 327 5.7E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1017 e8fe30d0330cbb88a1f526c13c43922c 445 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 216 229 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TMO_2650 7cb787bfc4492cf2f7f3ccf9eae67597 238 SMART SM00862 146 221 2.1E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_2650 7cb787bfc4492cf2f7f3ccf9eae67597 238 SUPERFAMILY SSF52172 1 175 2.79E-34 T 14-10-2018 IPR011006 CheY-like superfamily TMO_2650 7cb787bfc4492cf2f7f3ccf9eae67597 238 SMART SM00448 1 112 3.2E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2650 7cb787bfc4492cf2f7f3ccf9eae67597 238 Pfam PF00072 Response regulator receiver domain 3 112 6.6E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2650 7cb787bfc4492cf2f7f3ccf9eae67597 238 Gene3D G3DSA:1.10.10.10 124 227 2.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2650 7cb787bfc4492cf2f7f3ccf9eae67597 238 Gene3D G3DSA:3.40.50.2300 1 121 4.5E-32 T 14-10-2018 TMO_2650 7cb787bfc4492cf2f7f3ccf9eae67597 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 5.1E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_2069 c8a7be98f49c5fb0ca31597abcb15446 180 Pfam PF12915 Protein of unknown function (DUF3833) 2 154 1.0E-62 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 TMO_2008 0c66940959a79f9df90758eb34eae13b 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 305 2.6E-30 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0443 56559a99fa73f66eee18fdde0a361cef 487 SMART SM00345 18 77 2.6E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_c0443 56559a99fa73f66eee18fdde0a361cef 487 SUPERFAMILY SSF46785 7 78 5.45E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0443 56559a99fa73f66eee18fdde0a361cef 487 Pfam PF00155 Aminotransferase class I and II 189 426 1.7E-9 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_c0443 56559a99fa73f66eee18fdde0a361cef 487 SUPERFAMILY SSF53383 112 482 3.22E-69 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0443 56559a99fa73f66eee18fdde0a361cef 487 Gene3D G3DSA:1.10.10.10 4 78 1.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0443 56559a99fa73f66eee18fdde0a361cef 487 Gene3D G3DSA:3.40.640.10 115 475 4.2E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0443 56559a99fa73f66eee18fdde0a361cef 487 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 2.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_d0024 3f8e12d47c0e4fac2ba01dde6adf58a0 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 6.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_d0024 3f8e12d47c0e4fac2ba01dde6adf58a0 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 6.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_d0024 3f8e12d47c0e4fac2ba01dde6adf58a0 205 SUPERFAMILY SSF48498 80 163 5.15E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_d0024 3f8e12d47c0e4fac2ba01dde6adf58a0 205 Gene3D G3DSA:1.10.10.60 2 54 6.0E-19 T 14-10-2018 TMO_d0024 3f8e12d47c0e4fac2ba01dde6adf58a0 205 Gene3D G3DSA:1.10.357.10 55 197 2.0E-22 T 14-10-2018 TMO_d0024 3f8e12d47c0e4fac2ba01dde6adf58a0 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_d0024 3f8e12d47c0e4fac2ba01dde6adf58a0 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 5.4E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_d0024 3f8e12d47c0e4fac2ba01dde6adf58a0 205 SUPERFAMILY SSF46689 3 85 7.48E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0288 f1693c0e11705f03f80c7c1249cf839b 298 SUPERFAMILY SSF53850 89 284 1.7E-35 T 14-10-2018 TMO_a0288 f1693c0e11705f03f80c7c1249cf839b 298 SUPERFAMILY SSF46785 1 110 3.83E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0288 f1693c0e11705f03f80c7c1249cf839b 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0288 f1693c0e11705f03f80c7c1249cf839b 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0288 f1693c0e11705f03f80c7c1249cf839b 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0288 f1693c0e11705f03f80c7c1249cf839b 298 Gene3D G3DSA:3.40.190.290 90 285 8.2E-32 T 14-10-2018 TMO_a0288 f1693c0e11705f03f80c7c1249cf839b 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0288 f1693c0e11705f03f80c7c1249cf839b 298 Pfam PF03466 LysR substrate binding domain 88 283 1.5E-31 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_a0288 f1693c0e11705f03f80c7c1249cf839b 298 Gene3D G3DSA:1.10.10.10 1 83 6.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 SMART SM00283 437 691 1.8E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 Gene3D G3DSA:1.10.287.950 403 695 1.1E-52 T 14-10-2018 TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 Pfam PF00672 HAMP domain 347 397 5.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 SMART SM00304 347 400 4.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 465 494 1.1E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 564 593 1.1E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 SUPERFAMILY SSF58104 377 690 3.01E-59 T 14-10-2018 TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 Gene3D G3DSA:1.20.1480.50 314 402 4.7E-10 T 14-10-2018 TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 516 658 7.7E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 Pfam PF02743 Cache domain 49 262 3.6E-17 T 14-10-2018 IPR033479 Double Cache domain 1 TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 Gene3D G3DSA:3.30.450.20 67 214 2.0E-59 T 14-10-2018 TMO_a0193 7ba270f900a80552f5258b5bc6bf9b5d 697 Gene3D G3DSA:3.30.450.20 59 313 2.0E-59 T 14-10-2018 TMO_c0832 ca01384ee59a63bb9cbfdd897d26ea49 634 Gene3D G3DSA:3.20.20.240 48 475 6.8E-122 T 14-10-2018 TMO_c0832 ca01384ee59a63bb9cbfdd897d26ea49 634 Gene3D G3DSA:3.40.50.280 502 627 4.1E-33 T 14-10-2018 TMO_c0832 ca01384ee59a63bb9cbfdd897d26ea49 634 Pfam PF01642 Methylmalonyl-CoA mutase 49 539 1.4E-91 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TMO_c0832 ca01384ee59a63bb9cbfdd897d26ea49 634 SUPERFAMILY SSF51703 16 537 3.92E-115 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TMO_a0244 dea71c66378bb44df238f4279ad19977 351 Gene3D G3DSA:3.90.180.10 1 346 7.7E-88 T 14-10-2018 TMO_a0244 dea71c66378bb44df238f4279ad19977 351 Pfam PF00107 Zinc-binding dehydrogenase 176 306 2.2E-24 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_a0244 dea71c66378bb44df238f4279ad19977 351 SUPERFAMILY SSF51735 138 315 7.27E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0244 dea71c66378bb44df238f4279ad19977 351 SMART SM00829 11 345 8.4E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_a0244 dea71c66378bb44df238f4279ad19977 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 128 6.9E-26 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_a0244 dea71c66378bb44df238f4279ad19977 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 TMO_a0244 dea71c66378bb44df238f4279ad19977 351 SUPERFAMILY SSF50129 1 167 8.62E-47 T 14-10-2018 IPR011032 GroES-like superfamily TMO_0309 ee0c7857633f0569a19899c1aec31654 329 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 144 159 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 TMO_0309 ee0c7857633f0569a19899c1aec31654 329 SMART SM01400 20 136 8.1E-79 T 14-10-2018 TMO_0309 ee0c7857633f0569a19899c1aec31654 329 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 20 136 6.9E-48 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TMO_0309 ee0c7857633f0569a19899c1aec31654 329 Gene3D G3DSA:3.40.50.2020 23 317 3.8E-120 T 14-10-2018 TMO_0309 ee0c7857633f0569a19899c1aec31654 329 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 20 329 48.457 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 TMO_0309 ee0c7857633f0569a19899c1aec31654 329 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 20 329 2.9E-115 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TMO_0309 ee0c7857633f0569a19899c1aec31654 329 Gene3D G3DSA:3.40.50.2020 163 305 3.8E-120 T 14-10-2018 TMO_0309 ee0c7857633f0569a19899c1aec31654 329 Pfam PF14572 Phosphoribosyl synthetase-associated domain 220 328 8.8E-22 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TMO_0309 ee0c7857633f0569a19899c1aec31654 329 SUPERFAMILY SSF53271 85 319 3.25E-61 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like TMO_c0722 1b420238add1bd234ecdea7b333eebd3 430 Pfam PF13535 ATP-grasp domain 154 297 1.3E-8 T 14-10-2018 TMO_c0722 1b420238add1bd234ecdea7b333eebd3 430 Gene3D G3DSA:3.30.470.20 112 415 2.7E-56 T 14-10-2018 TMO_c0722 1b420238add1bd234ecdea7b333eebd3 430 SUPERFAMILY SSF56059 115 322 2.83E-23 T 14-10-2018 TMO_0343 c67770a2c05c6047dd8703d7c812178a 437 Pfam PF01595 Domain of unknown function DUF21 10 179 1.8E-42 T 14-10-2018 IPR002550 CNNM, transmembrane domain TMO_0343 c67770a2c05c6047dd8703d7c812178a 437 Gene3D G3DSA:3.10.580.10 189 343 1.1E-50 T 14-10-2018 TMO_0343 c67770a2c05c6047dd8703d7c812178a 437 Gene3D G3DSA:3.30.465.10 344 421 1.7E-23 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TMO_0343 c67770a2c05c6047dd8703d7c812178a 437 Pfam PF00571 CBS domain 285 330 1.1E-5 T 14-10-2018 IPR000644 CBS domain TMO_0343 c67770a2c05c6047dd8703d7c812178a 437 Pfam PF00571 CBS domain 207 264 0.0036 T 14-10-2018 IPR000644 CBS domain TMO_0343 c67770a2c05c6047dd8703d7c812178a 437 SUPERFAMILY SSF54631 202 344 8.29E-32 T 14-10-2018 TMO_0343 c67770a2c05c6047dd8703d7c812178a 437 SMART SM01091 345 423 1.1E-24 T 14-10-2018 IPR005170 Transporter-associated domain TMO_0343 c67770a2c05c6047dd8703d7c812178a 437 Pfam PF03471 Transporter associated domain 347 421 1.8E-18 T 14-10-2018 IPR005170 Transporter-associated domain TMO_0343 c67770a2c05c6047dd8703d7c812178a 437 SUPERFAMILY SSF56176 345 426 5.45E-20 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_2906 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 Pfam PF00005 ABC transporter 30 177 3.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2906 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2906 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 SUPERFAMILY SSF52540 15 256 1.6E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2906 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 SMART SM00382 39 227 3.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2906 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 Gene3D G3DSA:3.40.50.300 15 271 8.8E-72 T 14-10-2018 TMO_2971 d4f964a43f76b820369e4fd657dcb994 134 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 19 121 23.889 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TMO_2971 d4f964a43f76b820369e4fd657dcb994 134 Pfam PF02410 Ribosomal silencing factor during starvation 28 120 9.0E-27 T 14-10-2018 TMO_2971 d4f964a43f76b820369e4fd657dcb994 134 SUPERFAMILY SSF81301 19 122 3.11E-34 T 14-10-2018 TMO_2971 d4f964a43f76b820369e4fd657dcb994 134 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 24 120 1.2E-32 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TMO_2971 d4f964a43f76b820369e4fd657dcb994 134 Gene3D G3DSA:3.30.460.10 18 131 2.6E-38 T 14-10-2018 TMO_1046 649438b6688c48dc7bca856393b45696 407 Pfam PF03929 PepSY-associated TM region 7 383 2.2E-59 T 14-10-2018 IPR005625 PepSY-associated TM protein TMO_0734 669367edaf706d03a0034bede4e4c67c 119 Pfam PF07237 Protein of unknown function (DUF1428) 5 105 7.4E-45 T 14-10-2018 IPR009874 Protein of unknown function DUF1428 TMO_0734 669367edaf706d03a0034bede4e4c67c 119 Gene3D G3DSA:3.30.70.100 1 119 3.0E-45 T 14-10-2018 TMO_0734 669367edaf706d03a0034bede4e4c67c 119 PIRSF PIRSF007028 3 119 1.1E-48 T 14-10-2018 IPR009874 Protein of unknown function DUF1428 TMO_0734 669367edaf706d03a0034bede4e4c67c 119 SUPERFAMILY SSF54909 4 118 3.43E-50 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_2950 330df2b0dfc4459afd34b93f6bb05334 516 Pfam PF00221 Aromatic amino acid lyase 33 489 7.8E-147 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 TMO_2950 330df2b0dfc4459afd34b93f6bb05334 516 Gene3D G3DSA:1.10.275.10 18 214 3.4E-55 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal TMO_2950 330df2b0dfc4459afd34b93f6bb05334 516 Gene3D G3DSA:1.20.200.10 215 515 9.0E-85 T 14-10-2018 TMO_2950 330df2b0dfc4459afd34b93f6bb05334 516 SUPERFAMILY SSF48557 30 513 1.18E-145 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 TMO_2355 b37fcfbb1b515bbd3c533aa79725aa92 291 SUPERFAMILY SSF55729 1 94 4.75E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2355 b37fcfbb1b515bbd3c533aa79725aa92 291 Gene3D G3DSA:3.40.630.30 1 97 5.4E-7 T 14-10-2018 TMO_2947 4b80b8e728c5997fba5dcda686a55507 370 SUPERFAMILY SSF48371 41 245 5.51E-38 T 14-10-2018 IPR016024 Armadillo-type fold TMO_2947 4b80b8e728c5997fba5dcda686a55507 370 Gene3D G3DSA:1.25.40.290 130 244 1.4E-31 T 14-10-2018 TMO_a0558 8b25fd942ab4b5a5c6b5e7c22b80305a 229 SUPERFAMILY SSF56529 21 228 1.2E-69 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_a0558 8b25fd942ab4b5a5c6b5e7c22b80305a 229 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 228 2.9E-53 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 TMO_a0558 8b25fd942ab4b5a5c6b5e7c22b80305a 229 Gene3D G3DSA:3.90.850.10 1 229 1.3E-83 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_1139 7c31ff9d9d11be974c3bc77bea59a204 413 Gene3D G3DSA:1.20.1250.20 23 404 1.2E-50 T 14-10-2018 TMO_1139 7c31ff9d9d11be974c3bc77bea59a204 413 SUPERFAMILY SSF103473 15 408 9.29E-57 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_1139 7c31ff9d9d11be974c3bc77bea59a204 413 Pfam PF07690 Major Facilitator Superfamily 29 371 1.4E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_1487 8616b4374f2245564326f77f6e46f7fd 216 Pfam PF01810 LysE type translocator 25 207 4.8E-15 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_1959 c429c11081a1c439284c88eaa028275e 219 PIRSF PIRSF006324 10 218 8.7E-49 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_1959 c429c11081a1c439284c88eaa028275e 219 Pfam PF01810 LysE type translocator 24 215 1.6E-36 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_b0327 9785704031dfdca0c5ede96b320400c5 443 Gene3D G3DSA:3.50.50.60 9 435 4.2E-152 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0327 9785704031dfdca0c5ede96b320400c5 443 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 9 352 7.0E-123 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase TMO_b0327 9785704031dfdca0c5ede96b320400c5 443 SUPERFAMILY SSF51905 188 385 1.05E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0327 9785704031dfdca0c5ede96b320400c5 443 SUPERFAMILY SSF51905 8 249 4.13E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1699 1c90f30b47b349b926c0ec795ae52e99 92 Gene3D G3DSA:2.30.30.100 5 84 3.4E-33 T 14-10-2018 TMO_1699 1c90f30b47b349b926c0ec795ae52e99 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 8 70 29.303 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 TMO_1699 1c90f30b47b349b926c0ec795ae52e99 92 SUPERFAMILY SSF50182 11 74 8.65E-25 T 14-10-2018 IPR010920 LSM domain superfamily TMO_1699 1c90f30b47b349b926c0ec795ae52e99 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 10 70 1.2E-32 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 TMO_1699 1c90f30b47b349b926c0ec795ae52e99 92 Pfam PF17209 Hfq protein 12 74 1.7E-32 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 TMO_c0639 d45c4de9af7b73cb1a634d1a0e2c603e 316 Gene3D G3DSA:3.20.10.10 135 310 6.9E-47 T 14-10-2018 TMO_c0639 d45c4de9af7b73cb1a634d1a0e2c603e 316 SUPERFAMILY SSF56752 14 294 4.32E-67 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 TMO_c0639 d45c4de9af7b73cb1a634d1a0e2c603e 316 Gene3D G3DSA:3.30.470.10 2 132 1.0E-28 T 14-10-2018 TMO_c0639 d45c4de9af7b73cb1a634d1a0e2c603e 316 Pfam PF01063 Amino-transferase class IV 44 270 2.5E-38 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 TMO_2350 f9bf431ce80b8f440e234d74be1d574f 483 Gene3D G3DSA:3.40.630.30 262 417 5.0E-12 T 14-10-2018 TMO_2350 f9bf431ce80b8f440e234d74be1d574f 483 SUPERFAMILY SSF55729 256 421 8.68E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_3148 500a80e781aef9c4f22e0482496b4645 206 Gene3D G3DSA:3.40.30.10 34 206 1.4E-57 T 14-10-2018 TMO_3148 500a80e781aef9c4f22e0482496b4645 206 Pfam PF02630 SCO1/SenC 34 191 3.0E-50 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_3148 500a80e781aef9c4f22e0482496b4645 206 SUPERFAMILY SSF52833 49 205 8.08E-50 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_b0096 b9734e49c3d5356c7c5b1cbac2a06ac8 422 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 14 420 2.5E-105 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0096 b9734e49c3d5356c7c5b1cbac2a06ac8 422 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 416 4.9E-95 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_b0096 b9734e49c3d5356c7c5b1cbac2a06ac8 422 PIRSF PIRSF006066 1 422 1.1E-113 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0589 f57238a6d1a0d8e1b7dd82fc1ad6bab4 176 Gene3D G3DSA:1.10.10.10 1 86 1.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0589 f57238a6d1a0d8e1b7dd82fc1ad6bab4 176 Pfam PF03551 Transcriptional regulator PadR-like family 7 79 1.4E-9 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal TMO_b0589 f57238a6d1a0d8e1b7dd82fc1ad6bab4 176 SUPERFAMILY SSF46785 2 174 2.22E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0589 f57238a6d1a0d8e1b7dd82fc1ad6bab4 176 Pfam PF10400 Virulence activator alpha C-term 91 173 1.0E-22 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal TMO_1086 2a71d0e44580470a1646cecf249bf6a5 172 Pfam PF02623 FliW protein 47 169 6.8E-17 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 TMO_1086 2a71d0e44580470a1646cecf249bf6a5 172 SUPERFAMILY SSF141457 31 170 9.94E-20 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily TMO_1086 2a71d0e44580470a1646cecf249bf6a5 172 Gene3D G3DSA:2.30.290.10 22 172 2.4E-23 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily TMO_2080 f2a6cd969a0383253caff2a04bfc67cc 397 PIRSF PIRSF028704 2 382 3.8E-95 T 14-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC TMO_2080 f2a6cd969a0383253caff2a04bfc67cc 397 Pfam PF10129 OpgC protein 8 361 2.0E-96 T 14-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC TMO_a0480 94fef58e40c0adc0550416dde6294739 581 SUPERFAMILY SSF51294 387 525 1.28E-14 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TMO_a0480 94fef58e40c0adc0550416dde6294739 581 Gene3D G3DSA:2.170.16.10 388 527 1.4E-13 T 14-10-2018 TMO_a0480 94fef58e40c0adc0550416dde6294739 581 SMART SM00306 386 477 2.8E-4 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TMO_c0199 37b5a099f7ffb5a17d1a932edc16fe4e 160 SUPERFAMILY SSF75169 33 144 8.05E-10 T 14-10-2018 IPR027396 DsrEFH-like TMO_c0199 37b5a099f7ffb5a17d1a932edc16fe4e 160 Gene3D G3DSA:3.40.1260.10 31 149 8.2E-7 T 14-10-2018 IPR027396 DsrEFH-like TMO_c0199 37b5a099f7ffb5a17d1a932edc16fe4e 160 TIGRFAM TIGR04044 MSMEG_0572_fam: MSMEG_0572 family protein 3 160 1.6E-87 T 14-10-2018 IPR023847 Conserved hypothetical protein CHP04044, MSMEG0572 TMO_0393 d5d1489730381348a8c2195afc12d494 226 SUPERFAMILY SSF52218 1 218 1.84E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_0393 d5d1489730381348a8c2195afc12d494 226 Gene3D G3DSA:3.40.50.360 1 218 1.1E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_0393 d5d1489730381348a8c2195afc12d494 226 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 216 24.364 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 TMO_0393 d5d1489730381348a8c2195afc12d494 226 Pfam PF02525 Flavodoxin-like fold 4 214 4.6E-35 T 14-10-2018 IPR003680 Flavodoxin-like fold TMO_2411 4b508f100605900bc202ac359e81bb17 160 Gene3D G3DSA:3.20.70.20 46 160 1.6E-26 T 14-10-2018 TMO_2411 4b508f100605900bc202ac359e81bb17 160 SUPERFAMILY SSF48168 51 123 2.62E-16 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_2411 4b508f100605900bc202ac359e81bb17 160 SUPERFAMILY SSF51998 126 160 2.33E-6 T 14-10-2018 TMO_2411 4b508f100605900bc202ac359e81bb17 160 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 60 124 2.9E-14 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_b0401 9f64fffa4c95cb16dfd7a390c782a153 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0401 9f64fffa4c95cb16dfd7a390c782a153 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0401 9f64fffa4c95cb16dfd7a390c782a153 208 SUPERFAMILY SSF48498 80 186 3.71E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_b0401 9f64fffa4c95cb16dfd7a390c782a153 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 2.2E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0401 9f64fffa4c95cb16dfd7a390c782a153 208 SUPERFAMILY SSF46689 7 82 3.39E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0401 9f64fffa4c95cb16dfd7a390c782a153 208 Pfam PF13305 WHG domain 87 172 2.0E-7 T 14-10-2018 IPR025996 WHG domain TMO_b0401 9f64fffa4c95cb16dfd7a390c782a153 208 Gene3D G3DSA:1.10.357.10 6 195 2.6E-35 T 14-10-2018 TMO_1486 ffd1423bb26102c24a85a7a958f65402 155 SUPERFAMILY SSF46785 4 64 1.74E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1486 ffd1423bb26102c24a85a7a958f65402 155 SMART SM00344 5 114 2.8E-47 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_1486 ffd1423bb26102c24a85a7a958f65402 155 Gene3D G3DSA:3.30.70.920 59 141 1.1E-25 T 14-10-2018 TMO_1486 ffd1423bb26102c24a85a7a958f65402 155 Pfam PF01037 Lrp/AsnC ligand binding domain 73 139 4.4E-19 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_1486 ffd1423bb26102c24a85a7a958f65402 155 SUPERFAMILY SSF54909 67 154 2.95E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_1486 ffd1423bb26102c24a85a7a958f65402 155 Gene3D G3DSA:1.10.10.10 2 58 7.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1486 ffd1423bb26102c24a85a7a958f65402 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 5.1E-20 T 14-10-2018 TMO_1486 ffd1423bb26102c24a85a7a958f65402 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 3.6E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_1486 ffd1423bb26102c24a85a7a958f65402 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 3.6E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_1486 ffd1423bb26102c24a85a7a958f65402 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 3.6E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_b0381 2ffeb7d04bdbdf8a41023c8b311b7d2f 312 SUPERFAMILY SSF161098 92 294 1.96E-20 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0381 2ffeb7d04bdbdf8a41023c8b311b7d2f 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 312 6.7E-43 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0381 2ffeb7d04bdbdf8a41023c8b311b7d2f 312 Gene3D G3DSA:1.10.3720.10 90 303 3.0E-25 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2437 30d6336cb0c11e8147bca5420e577af3 445 PIRSF PIRSF006066 7 445 1.2E-73 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_2437 30d6336cb0c11e8147bca5420e577af3 445 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 435 1.6E-73 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_3556 dee4b9d02bc66defb16660a76cf409db 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 2.0E-31 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type TMO_3556 dee4b9d02bc66defb16660a76cf409db 151 Gene3D G3DSA:1.10.10.10 2 143 1.5E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3556 dee4b9d02bc66defb16660a76cf409db 151 SUPERFAMILY SSF46785 3 133 8.51E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3556 dee4b9d02bc66defb16660a76cf409db 151 Pfam PF02082 Transcriptional regulator 3 84 7.5E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type TMO_b0351 16746b432abf360b630569b7a691dded 547 SUPERFAMILY SSF161098 7 270 1.12E-46 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0351 16746b432abf360b630569b7a691dded 547 Gene3D G3DSA:1.10.3720.10 294 543 1.5E-39 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0351 16746b432abf360b630569b7a691dded 547 Gene3D G3DSA:1.10.3720.10 6 271 7.9E-53 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0351 16746b432abf360b630569b7a691dded 547 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 359 537 3.2E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0351 16746b432abf360b630569b7a691dded 547 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 263 4.5E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0351 16746b432abf360b630569b7a691dded 547 SUPERFAMILY SSF161098 298 535 9.7E-39 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0501 144c6c2f505569ae88afe9d64f9ea937 376 Gene3D G3DSA:3.40.50.2300 1 329 7.1E-136 T 14-10-2018 TMO_0501 144c6c2f505569ae88afe9d64f9ea937 376 Gene3D G3DSA:3.40.50.2300 114 347 7.1E-136 T 14-10-2018 TMO_0501 144c6c2f505569ae88afe9d64f9ea937 376 Pfam PF13433 Periplasmic binding protein domain 1 358 1.1E-139 T 14-10-2018 TMO_0501 144c6c2f505569ae88afe9d64f9ea937 376 SUPERFAMILY SSF53822 1 359 2.02E-88 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_1491 08c661d25621548628be64bca71c59ce 194 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 69 117 1.9E-13 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_1491 08c661d25621548628be64bca71c59ce 194 Gene3D G3DSA:1.20.1290.10 71 194 1.5E-38 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_1491 08c661d25621548628be64bca71c59ce 194 Pfam PF02627 Carboxymuconolactone decarboxylase family 51 134 1.9E-14 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_1491 08c661d25621548628be64bca71c59ce 194 Gene3D G3DSA:1.20.5.810 18 69 1.4E-24 T 14-10-2018 TMO_1491 08c661d25621548628be64bca71c59ce 194 SUPERFAMILY SSF69118 11 192 1.09E-57 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_1491 08c661d25621548628be64bca71c59ce 194 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 12 188 2.6E-64 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related TMO_0426 c24a789ce1d59f2609f6e14290f1493b 212 PIRSF PIRSF006755 1 210 3.0E-47 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 TMO_0426 c24a789ce1d59f2609f6e14290f1493b 212 Gene3D G3DSA:3.40.50.300 3 198 1.4E-44 T 14-10-2018 TMO_0426 c24a789ce1d59f2609f6e14290f1493b 212 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 199 25.064 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 TMO_0426 c24a789ce1d59f2609f6e14290f1493b 212 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 158 2.2E-33 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 TMO_0426 c24a789ce1d59f2609f6e14290f1493b 212 Pfam PF13500 AAA domain 3 191 8.6E-50 T 14-10-2018 TMO_0426 c24a789ce1d59f2609f6e14290f1493b 212 SUPERFAMILY SSF52540 1 193 1.31E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1362 de1f9b327381d2af02cd98a0a961184f 133 Gene3D G3DSA:3.40.250.10 1 128 1.7E-36 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_1362 de1f9b327381d2af02cd98a0a961184f 133 SUPERFAMILY SSF52821 10 128 4.32E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_1362 de1f9b327381d2af02cd98a0a961184f 133 SMART SM00450 21 125 2.9E-16 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_1362 de1f9b327381d2af02cd98a0a961184f 133 Pfam PF00581 Rhodanese-like domain 24 122 1.2E-14 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_c0095 340c8f6b086e023c1d3558da05716833 291 SUPERFAMILY SSF52540 1 266 9.46E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0095 340c8f6b086e023c1d3558da05716833 291 Pfam PF13614 AAA domain 1 168 2.4E-25 T 14-10-2018 IPR025669 AAA domain TMO_c0095 340c8f6b086e023c1d3558da05716833 291 Gene3D G3DSA:3.40.50.300 1 273 1.4E-48 T 14-10-2018 TMO_b0284 074cc353db283c83c2283476d8f1af31 334 Gene3D G3DSA:3.30.930.10 11 306 4.3E-72 T 14-10-2018 TMO_b0284 074cc353db283c83c2283476d8f1af31 334 SUPERFAMILY SSF55681 21 283 1.1E-25 T 14-10-2018 TMO_b0420 9c48eccf479857e199f1eeccfb88a328 476 SMART SM00267 301 473 6.3E-57 T 14-10-2018 IPR000160 GGDEF domain TMO_b0420 9c48eccf479857e199f1eeccfb88a328 476 SUPERFAMILY SSF46458 44 169 1.44E-13 T 14-10-2018 IPR009050 Globin-like superfamily TMO_b0420 9c48eccf479857e199f1eeccfb88a328 476 Pfam PF00990 Diguanylate cyclase, GGDEF domain 314 469 3.5E-43 T 14-10-2018 IPR000160 GGDEF domain TMO_b0420 9c48eccf479857e199f1eeccfb88a328 476 Gene3D G3DSA:1.10.490.10 16 171 1.9E-44 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_b0420 9c48eccf479857e199f1eeccfb88a328 476 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 311 473 8.5E-50 T 14-10-2018 IPR000160 GGDEF domain TMO_b0420 9c48eccf479857e199f1eeccfb88a328 476 Gene3D G3DSA:3.30.70.270 308 474 2.7E-54 T 14-10-2018 TMO_b0420 9c48eccf479857e199f1eeccfb88a328 476 Pfam PF11563 Protoglobin 44 173 2.5E-8 T 14-10-2018 TMO_b0420 9c48eccf479857e199f1eeccfb88a328 476 SUPERFAMILY SSF55073 317 472 1.8E-47 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_c0113 e2337b3640f4dd7a851c557dd850685f 190 Pfam PF05145 Transition state regulatory protein AbrB 13 184 6.9E-49 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 TMO_c0113 e2337b3640f4dd7a851c557dd850685f 190 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 28 183 1.2E-41 T 14-10-2018 IPR017516 AbrB duplication TMO_1276 c5544cbfa3c0616db102d56453c17ab1 452 SUPERFAMILY SSF75304 6 445 3.27E-111 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1276 c5544cbfa3c0616db102d56453c17ab1 452 Gene3D G3DSA:3.90.1300.10 7 446 6.3E-120 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1276 c5544cbfa3c0616db102d56453c17ab1 452 Pfam PF01425 Amidase 44 436 7.9E-84 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_2785 7552fe8b485433c52d39f69c439ae9d6 524 Gene3D G3DSA:3.30.590.20 378 493 4.7E-7 T 14-10-2018 TMO_2785 7552fe8b485433c52d39f69c439ae9d6 524 Gene3D G3DSA:3.30.590.20 3 253 2.0E-24 T 14-10-2018 TMO_2785 7552fe8b485433c52d39f69c439ae9d6 524 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 77 214 4.0E-13 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 TMO_2785 7552fe8b485433c52d39f69c439ae9d6 524 SUPERFAMILY SSF55931 11 486 2.06E-19 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TMO_1694 dc75c97ca7b475e93a678ea11d9441f9 105 Gene3D G3DSA:3.40.50.720 4 103 2.6E-26 T 14-10-2018 TMO_1694 dc75c97ca7b475e93a678ea11d9441f9 105 SUPERFAMILY SSF51735 6 91 4.5E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1694 dc75c97ca7b475e93a678ea11d9441f9 105 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 8.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1694 dc75c97ca7b475e93a678ea11d9441f9 105 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1694 dc75c97ca7b475e93a678ea11d9441f9 105 Pfam PF00106 short chain dehydrogenase 6 88 8.2E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1808 958d72e797c4939e81aaa1fc40edcf36 290 Pfam PF13411 MerR HTH family regulatory protein 24 92 4.2E-23 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_1808 958d72e797c4939e81aaa1fc40edcf36 290 Gene3D G3DSA:1.10.1660.10 19 93 3.9E-20 T 14-10-2018 TMO_1808 958d72e797c4939e81aaa1fc40edcf36 290 SUPERFAMILY SSF46955 24 93 2.43E-15 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily TMO_1808 958d72e797c4939e81aaa1fc40edcf36 290 SMART SM00422 24 93 5.8E-4 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_0969 68f6589ae6d65550003c182c2f0059d2 373 Pfam PF11339 Protein of unknown function (DUF3141) 83 338 7.4E-22 T 14-10-2018 IPR024501 Protein of unknown function DUF3141 TMO_0969 68f6589ae6d65550003c182c2f0059d2 373 Gene3D G3DSA:3.40.50.1820 64 353 9.3E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0969 68f6589ae6d65550003c182c2f0059d2 373 SUPERFAMILY SSF53474 70 371 4.41E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2619 45247f707e1d4773cb7f08f326f9e712 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.722 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid TMO_2619 45247f707e1d4773cb7f08f326f9e712 101 Gene3D G3DSA:4.10.830.10 41 101 1.0E-23 T 14-10-2018 TMO_2619 45247f707e1d4773cb7f08f326f9e712 101 SUPERFAMILY SSF57716 2 101 8.55E-36 T 14-10-2018 TMO_2619 45247f707e1d4773cb7f08f326f9e712 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.3E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2619 45247f707e1d4773cb7f08f326f9e712 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TMO_a0592 8a72052e9dc5ff38e0af30811a273e01 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 90 4.2E-7 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_a0592 8a72052e9dc5ff38e0af30811a273e01 96 Gene3D G3DSA:3.30.2310.20 3 91 1.3E-30 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_a0592 8a72052e9dc5ff38e0af30811a273e01 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 90 3.0E-19 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_a0205 ffc64ac28a97d9434d9fcfbc712dbce5 164 SUPERFAMILY SSF54427 8 136 4.39E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_a0205 ffc64ac28a97d9434d9fcfbc712dbce5 164 Pfam PF12680 SnoaL-like domain 18 122 1.2E-17 T 14-10-2018 IPR037401 SnoaL-like domain TMO_a0205 ffc64ac28a97d9434d9fcfbc712dbce5 164 Gene3D G3DSA:3.10.450.50 1 137 9.2E-24 T 14-10-2018 TMO_c0379 6a6e26c00a03c3f33345fc60f3cc4cc3 418 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 9 404 2.6E-130 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 TMO_c0379 6a6e26c00a03c3f33345fc60f3cc4cc3 418 SUPERFAMILY SSF53187 3 408 1.18E-100 T 14-10-2018 TMO_c0379 6a6e26c00a03c3f33345fc60f3cc4cc3 418 PIRSF PIRSF001235 3 410 1.5E-134 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 TMO_c0379 6a6e26c00a03c3f33345fc60f3cc4cc3 418 SUPERFAMILY SSF55031 211 327 6.88E-30 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TMO_c0379 6a6e26c00a03c3f33345fc60f3cc4cc3 418 Pfam PF07687 Peptidase dimerisation domain 210 310 2.6E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain TMO_c0379 6a6e26c00a03c3f33345fc60f3cc4cc3 418 Gene3D G3DSA:3.30.70.360 211 325 8.5E-156 T 14-10-2018 TMO_c0379 6a6e26c00a03c3f33345fc60f3cc4cc3 418 Pfam PF01546 Peptidase family M20/M25/M40 79 403 1.4E-36 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 TMO_c0379 6a6e26c00a03c3f33345fc60f3cc4cc3 418 Gene3D G3DSA:3.40.630.10 17 400 8.5E-156 T 14-10-2018 TMO_0152 3069022541d3daa3bdd907c17fbc24b0 250 Gene3D G3DSA:3.30.70.2970 60 161 3.2E-18 T 14-10-2018 TMO_0152 3069022541d3daa3bdd907c17fbc24b0 250 Gene3D G3DSA:3.30.110.170 51 244 3.2E-18 T 14-10-2018 TMO_0152 3069022541d3daa3bdd907c17fbc24b0 250 Pfam PF04402 Protein of unknown function (DUF541) 49 245 9.0E-25 T 14-10-2018 IPR007497 Protein of unknown function DUF541 TMO_b0478 ae508ac792e6c79d6c5419b4bf75431e 109 SMART SM00834 1 42 4.5E-16 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TMO_b0478 ae508ac792e6c79d6c5419b4bf75431e 109 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 47 2.8E-16 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TMO_b0478 ae508ac792e6c79d6c5419b4bf75431e 109 Pfam PF09723 Zinc ribbon domain 1 41 7.6E-14 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TMO_3368 5e920ed6dc382da0508cc619453c5ae1 210 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TMO_3368 5e920ed6dc382da0508cc619453c5ae1 210 Gene3D G3DSA:3.20.20.70 9 206 8.4E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3368 5e920ed6dc382da0508cc619453c5ae1 210 Pfam PF01081 KDPG and KHG aldolase 12 187 4.8E-22 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TMO_3368 5e920ed6dc382da0508cc619453c5ae1 210 SUPERFAMILY SSF51569 9 204 7.33E-51 T 14-10-2018 TMO_0187 298bee27d22331dd612f334180a53a2f 310 TIGRFAM TIGR00688 rarD: protein RarD 30 275 2.1E-55 T 14-10-2018 IPR004626 RarD protein GO:0005887 TMO_0187 298bee27d22331dd612f334180a53a2f 310 Pfam PF00892 EamA-like transporter family 25 157 2.8E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_0187 298bee27d22331dd612f334180a53a2f 310 SUPERFAMILY SSF103481 59 160 5.49E-14 T 14-10-2018 TMO_0187 298bee27d22331dd612f334180a53a2f 310 SUPERFAMILY SSF103481 209 298 1.96E-5 T 14-10-2018 TMO_2555 bd7b89605474a945697864bae81ac6ac 416 Gene3D G3DSA:1.20.1720.10 21 405 2.0E-106 T 14-10-2018 TMO_2555 bd7b89605474a945697864bae81ac6ac 416 SUPERFAMILY SSF103473 17 409 3.92E-61 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2555 bd7b89605474a945697864bae81ac6ac 416 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 20 402 1.7E-96 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 TMO_2555 bd7b89605474a945697864bae81ac6ac 416 Pfam PF07690 Major Facilitator Superfamily 27 373 5.0E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_1133 376bebf4ba3938e79f9ef62ee96dc596 179 SUPERFAMILY SSF55729 21 169 2.06E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_1133 376bebf4ba3938e79f9ef62ee96dc596 179 Gene3D G3DSA:3.40.630.30 2 174 6.1E-22 T 14-10-2018 TMO_1133 376bebf4ba3938e79f9ef62ee96dc596 179 Pfam PF00583 Acetyltransferase (GNAT) family 72 165 8.9E-11 T 14-10-2018 IPR000182 GNAT domain TMO_0695 c6a7d1578f5c24afacef0f27aa74ae08 149 SUPERFAMILY SSF46785 17 144 8.95E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0695 c6a7d1578f5c24afacef0f27aa74ae08 149 SMART SM00347 28 128 4.1E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0695 c6a7d1578f5c24afacef0f27aa74ae08 149 Gene3D G3DSA:1.10.10.10 2 145 6.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0695 c6a7d1578f5c24afacef0f27aa74ae08 149 Pfam PF01047 MarR family 35 92 1.1E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0695 c6a7d1578f5c24afacef0f27aa74ae08 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 7.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0695 c6a7d1578f5c24afacef0f27aa74ae08 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 7.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0695 c6a7d1578f5c24afacef0f27aa74ae08 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 7.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0403 594493aa9b13128dca8632b29a3422a0 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 4.6E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_c0403 594493aa9b13128dca8632b29a3422a0 129 Gene3D G3DSA:3.10.180.10 1 129 5.6E-55 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_c0403 594493aa9b13128dca8632b29a3422a0 129 SUPERFAMILY SSF54593 3 125 9.53E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_0868 0f36d9c0573d3df6b4ff5db77189d9c8 294 Gene3D G3DSA:3.40.190.10 33 288 1.0E-94 T 14-10-2018 TMO_0868 0f36d9c0573d3df6b4ff5db77189d9c8 294 SUPERFAMILY SSF53850 25 292 8.69E-83 T 14-10-2018 TMO_0868 0f36d9c0573d3df6b4ff5db77189d9c8 294 Gene3D G3DSA:3.40.190.100 114 225 1.0E-94 T 14-10-2018 TMO_0868 0f36d9c0573d3df6b4ff5db77189d9c8 294 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 278 5.1E-71 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 TMO_1839 92e444583638ef2043225c6ae7b3f23a 414 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 44 256 4.3E-16 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 TMO_2481 e276fef384fc352de263d0714130e4fd 505 Pfam PF00361 Proton-conducting membrane transporter 130 421 8.0E-52 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2481 e276fef384fc352de263d0714130e4fd 505 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 1.7E-15 T 14-10-2018 TMO_2481 e276fef384fc352de263d0714130e4fd 505 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 1.7E-15 T 14-10-2018 TMO_2481 e276fef384fc352de263d0714130e4fd 505 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 1.7E-15 T 14-10-2018 TMO_1729 0fb0cc3d5ba87e682449f079931e079c 132 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 22 122 2.5E-42 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1729 0fb0cc3d5ba87e682449f079931e079c 132 Hamap MF_01954 Urease subunit beta [ureB]. 22 122 31.057 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1729 0fb0cc3d5ba87e682449f079931e079c 132 Pfam PF00699 Urease beta subunit 24 120 1.3E-43 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1729 0fb0cc3d5ba87e682449f079931e079c 132 Gene3D G3DSA:2.10.150.10 17 129 2.1E-46 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_1729 0fb0cc3d5ba87e682449f079931e079c 132 SUPERFAMILY SSF51278 22 124 1.7E-46 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 TMO_a0085 dcd4f0c068f050d7f443567988949ef5 172 Pfam PF04965 Gene 25-like lysozyme 44 143 8.6E-18 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD TMO_a0085 dcd4f0c068f050d7f443567988949ef5 172 SUPERFAMILY SSF160719 45 156 2.62E-9 T 14-10-2018 TMO_a0085 dcd4f0c068f050d7f443567988949ef5 172 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 21 163 1.4E-31 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein TMO_2038 6a7ee2ed25bb214e55188d203783ce47 292 Pfam PF12833 Helix-turn-helix domain 207 284 6.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_2038 6a7ee2ed25bb214e55188d203783ce47 292 SUPERFAMILY SSF51182 59 240 4.18E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_2038 6a7ee2ed25bb214e55188d203783ce47 292 SUPERFAMILY SSF46689 240 285 1.25E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2038 6a7ee2ed25bb214e55188d203783ce47 292 Gene3D G3DSA:1.10.10.60 185 288 1.1E-19 T 14-10-2018 TMO_2038 6a7ee2ed25bb214e55188d203783ce47 292 SMART SM00342 201 283 1.2E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_d0047 1f8efe6b78684baf58e36d73e74382c7 119 SUPERFAMILY SSF54593 6 111 3.85E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_d0047 1f8efe6b78684baf58e36d73e74382c7 119 Gene3D G3DSA:3.10.180.10 1 118 1.6E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_0668 bce035167e6b8296c2a50daa9f111596 181 SUPERFAMILY SSF56209 6 150 5.34E-9 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_0647 b1d3bd158181c28a96f1543c88b8cc00 242 Gene3D G3DSA:1.10.357.10 7 210 2.7E-67 T 14-10-2018 TMO_0647 b1d3bd158181c28a96f1543c88b8cc00 242 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 1.2E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0647 b1d3bd158181c28a96f1543c88b8cc00 242 SUPERFAMILY SSF46689 3 74 2.15E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0647 b1d3bd158181c28a96f1543c88b8cc00 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 8.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0647 b1d3bd158181c28a96f1543c88b8cc00 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 8.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0647 b1d3bd158181c28a96f1543c88b8cc00 242 SUPERFAMILY SSF48498 82 207 1.36E-32 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_b0429 76ddb2dd0f35ca3157f69033e02f60cd 285 SUPERFAMILY SSF54593 8 247 3.99E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0429 76ddb2dd0f35ca3157f69033e02f60cd 285 Gene3D G3DSA:3.10.180.10 131 282 2.6E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0429 76ddb2dd0f35ca3157f69033e02f60cd 285 Gene3D G3DSA:3.10.180.10 3 127 9.6E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0429 76ddb2dd0f35ca3157f69033e02f60cd 285 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 138 246 2.6E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_2175 724635a3b8bc485a9a9ee8aa18a77dd9 596 SUPERFAMILY SSF56024 251 403 1.41E-5 T 14-10-2018 TMO_2175 724635a3b8bc485a9a9ee8aa18a77dd9 596 Gene3D G3DSA:3.30.870.10 261 408 1.7E-6 T 14-10-2018 TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 Pfam PF00106 short chain dehydrogenase 12 201 1.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 SUPERFAMILY SSF51735 3 238 1.95E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 Gene3D G3DSA:3.40.50.720 5 248 3.6E-63 T 14-10-2018 TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 6.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0795 717e9fdcfab2117cd6109f1bf9988261 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 6.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1497 cff0bffe7bb6b41f83f2296b12b160d2 190 Pfam PF11188 Protein of unknown function (DUF2975) 72 186 4.3E-10 T 14-10-2018 IPR021354 Protein of unknown function DUF2975 TMO_b0353 d2f60b8ac7a745b6f00fff0348b1910a 294 Pfam PF03466 LysR substrate binding domain 98 290 1.5E-18 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0353 d2f60b8ac7a745b6f00fff0348b1910a 294 SUPERFAMILY SSF46785 7 83 4.89E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0353 d2f60b8ac7a745b6f00fff0348b1910a 294 Gene3D G3DSA:3.40.190.10 166 261 7.1E-29 T 14-10-2018 TMO_b0353 d2f60b8ac7a745b6f00fff0348b1910a 294 Gene3D G3DSA:3.40.190.10 107 287 7.1E-29 T 14-10-2018 TMO_b0353 d2f60b8ac7a745b6f00fff0348b1910a 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 6.7E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0353 d2f60b8ac7a745b6f00fff0348b1910a 294 SUPERFAMILY SSF53850 104 293 5.07E-23 T 14-10-2018 TMO_b0353 d2f60b8ac7a745b6f00fff0348b1910a 294 Gene3D G3DSA:1.10.10.10 4 90 1.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0353 d2f60b8ac7a745b6f00fff0348b1910a 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0353 d2f60b8ac7a745b6f00fff0348b1910a 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0353 d2f60b8ac7a745b6f00fff0348b1910a 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3361 0049675fccb6445ac754d86d04eb7cb0 243 Gene3D G3DSA:3.20.20.70 1 240 5.2E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3361 0049675fccb6445ac754d86d04eb7cb0 243 Pfam PF00977 Histidine biosynthesis protein 3 230 1.2E-78 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 TMO_3361 0049675fccb6445ac754d86d04eb7cb0 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 238 35.63 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 TMO_3361 0049675fccb6445ac754d86d04eb7cb0 243 SUPERFAMILY SSF51366 2 236 3.45E-73 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TMO_3361 0049675fccb6445ac754d86d04eb7cb0 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 1.5E-80 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 TMO_2792 3977f605cce91f0e2e95c959ac057b67 89 Gene3D G3DSA:3.40.5.90 5 89 3.8E-34 T 14-10-2018 TMO_2792 3977f605cce91f0e2e95c959ac057b67 89 Pfam PF09360 Iron-binding zinc finger CDGSH type 24 51 2.8E-10 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 TMO_2792 3977f605cce91f0e2e95c959ac057b67 89 SMART SM00704 57 88 0.1 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 TMO_2792 3977f605cce91f0e2e95c959ac057b67 89 SMART SM00704 19 56 4.4E-10 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 TMO_c0042 8a40ace4213f0e35b73fea2474100228 132 Pfam PF11990 Protein of unknown function (DUF3487) 12 130 3.7E-42 T 14-10-2018 IPR021877 Protein of unknown function DUF3487 TMO_c0042 8a40ace4213f0e35b73fea2474100228 132 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 14 129 3.2E-43 T 14-10-2018 IPR021877 Protein of unknown function DUF3487 TMO_1689 0ac767347a046f0490ab1cf5060584f1 200 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 172 5.2E-54 T 14-10-2018 IPR018648 Protein of unknown function DUF2076 TMO_2741 688bf4242dc78baaa43aef24c24d0e7b 83 SUPERFAMILY SSF55729 3 58 5.11E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2741 688bf4242dc78baaa43aef24c24d0e7b 83 Gene3D G3DSA:3.40.630.30 1 77 4.2E-16 T 14-10-2018 TMO_3358 abab243bbc33f5d0458b2a81506446ce 201 SUPERFAMILY SSF54211 90 180 8.85E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_3358 abab243bbc33f5d0458b2a81506446ce 201 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 TMO_3358 abab243bbc33f5d0458b2a81506446ce 201 SUPERFAMILY SSF54211 4 88 2.53E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_3358 abab243bbc33f5d0458b2a81506446ce 201 Gene3D G3DSA:3.30.230.40 1 91 4.7E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 TMO_3358 abab243bbc33f5d0458b2a81506446ce 201 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 43.664 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 TMO_3358 abab243bbc33f5d0458b2a81506446ce 201 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 6.9E-65 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 TMO_3358 abab243bbc33f5d0458b2a81506446ce 201 Gene3D G3DSA:3.30.230.40 92 199 1.5E-40 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 TMO_3358 abab243bbc33f5d0458b2a81506446ce 201 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 TMO_1587 c4bb03685249ac57bb71867b1bd904aa 239 SMART SM00987 43 223 1.1E-31 T 14-10-2018 TMO_1587 c4bb03685249ac57bb71867b1bd904aa 239 Gene3D G3DSA:3.40.470.10 15 230 1.8E-56 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_1587 c4bb03685249ac57bb71867b1bd904aa 239 SMART SM00986 43 223 1.1E-31 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_1587 c4bb03685249ac57bb71867b1bd904aa 239 Pfam PF03167 Uracil DNA glycosylase superfamily 44 224 7.0E-26 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_1587 c4bb03685249ac57bb71867b1bd904aa 239 SUPERFAMILY SSF52141 17 230 1.18E-44 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TMO_0779 84c788c6892ea665e2f5473193ac4132 247 Gene3D G3DSA:2.40.50.90 34 155 1.2E-26 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily TMO_0779 84c788c6892ea665e2f5473193ac4132 247 SMART SM00318 28 151 3.2E-26 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 TMO_0779 84c788c6892ea665e2f5473193ac4132 247 Pfam PF00565 Staphylococcal nuclease homologue 48 150 3.9E-19 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 TMO_0779 84c788c6892ea665e2f5473193ac4132 247 SUPERFAMILY SSF50199 35 158 1.1E-34 T 14-10-2018 TMO_a0197 c194ef3b88eaaf70bde0bfc82f69d2f2 418 Pfam PF13000 Acetyl-coenzyme A transporter 1 23 166 7.5E-20 T 14-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 TMO_a0197 c194ef3b88eaaf70bde0bfc82f69d2f2 418 SUPERFAMILY SSF103473 19 416 1.29E-28 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_a0197 c194ef3b88eaaf70bde0bfc82f69d2f2 418 Gene3D G3DSA:1.20.1250.20 13 408 2.6E-21 T 14-10-2018 TMO_c0893 c3bdc94e2d0aa36f98583ba27f063391 516 Pfam PF02321 Outer membrane efflux protein 286 450 7.6E-14 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_c0893 c3bdc94e2d0aa36f98583ba27f063391 516 Pfam PF02321 Outer membrane efflux protein 60 260 2.5E-17 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TMO_c0893 c3bdc94e2d0aa36f98583ba27f063391 516 SUPERFAMILY SSF56954 9 468 2.49E-53 T 14-10-2018 TMO_c0893 c3bdc94e2d0aa36f98583ba27f063391 516 Gene3D G3DSA:1.20.1600.10 24 469 1.3E-43 T 14-10-2018 TMO_c0541 66e9f32dbd5824c820862df5e1b3d01c 332 Gene3D G3DSA:1.10.10.10 22 107 1.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0541 66e9f32dbd5824c820862df5e1b3d01c 332 Gene3D G3DSA:3.40.190.290 116 320 3.2E-43 T 14-10-2018 TMO_c0541 66e9f32dbd5824c820862df5e1b3d01c 332 SUPERFAMILY SSF53850 114 317 2.28E-40 T 14-10-2018 TMO_c0541 66e9f32dbd5824c820862df5e1b3d01c 332 SUPERFAMILY SSF46785 25 136 9.33E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0541 66e9f32dbd5824c820862df5e1b3d01c 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 30 86 6.4E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0541 66e9f32dbd5824c820862df5e1b3d01c 332 Pfam PF03466 LysR substrate binding domain 112 313 2.0E-46 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0541 66e9f32dbd5824c820862df5e1b3d01c 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 64 75 3.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0541 66e9f32dbd5824c820862df5e1b3d01c 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0541 66e9f32dbd5824c820862df5e1b3d01c 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 64 3.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0268 77bf5f3ebf8c4b7117df6b1ac770cc51 254 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 70 224 2.1E-20 T 14-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 TMO_b0108 bb4902af83e2079fee69f055d364cbeb 491 PIRSF PIRSF006446 2 463 1.2E-200 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 TMO_b0108 bb4902af83e2079fee69f055d364cbeb 491 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 437 7.9E-161 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 TMO_0690 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0690 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0690 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0690 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0690 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0690 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0690 99705ebfdb347880849a4b2a26ef5770 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 253 8.2E-55 T 14-10-2018 TMO_0690 99705ebfdb347880849a4b2a26ef5770 269 SUPERFAMILY SSF51735 12 256 1.9E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0690 99705ebfdb347880849a4b2a26ef5770 269 Gene3D G3DSA:3.40.50.720 2 258 1.5E-74 T 14-10-2018 TMO_0374 b8fa1b3836124135ca83a4ed249a7d56 263 SUPERFAMILY SSF53335 29 262 7.5E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0374 b8fa1b3836124135ca83a4ed249a7d56 263 Gene3D G3DSA:3.40.50.150 27 262 1.6E-66 T 14-10-2018 TMO_0374 b8fa1b3836124135ca83a4ed249a7d56 263 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 27 262 37.748 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 TMO_0374 b8fa1b3836124135ca83a4ed249a7d56 263 Pfam PF08241 Methyltransferase domain 84 179 5.7E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TMO_0374 b8fa1b3836124135ca83a4ed249a7d56 263 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 27 255 7.6E-76 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 TMO_3067 a6f407cf7d8c2823de78ce65c8863690 285 SUPERFAMILY SSF52540 24 263 1.59E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3067 a6f407cf7d8c2823de78ce65c8863690 285 Gene3D G3DSA:3.40.50.300 22 265 6.3E-55 T 14-10-2018 TMO_3067 a6f407cf7d8c2823de78ce65c8863690 285 SMART SM00382 52 266 1.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3067 a6f407cf7d8c2823de78ce65c8863690 285 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3067 a6f407cf7d8c2823de78ce65c8863690 285 Pfam PF00005 ABC transporter 43 191 7.8E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2776 a7b472b436514241f43e17bd576184a7 212 SUPERFAMILY SSF63965 4 205 3.4E-64 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 TMO_2776 a7b472b436514241f43e17bd576184a7 212 Pfam PF02570 Precorrin-8X methylmutase 11 205 2.5E-65 T 14-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 TMO_2776 a7b472b436514241f43e17bd576184a7 212 Gene3D G3DSA:3.40.50.10230 1 207 2.1E-71 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 TMO_1589 082521c1f10b531ae0d06c4013ba2cb8 165 SUPERFAMILY SSF55083 3 146 8.37E-37 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TMO_1589 082521c1f10b531ae0d06c4013ba2cb8 165 Gene3D G3DSA:3.30.70.560 1 155 2.2E-39 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TMO_1589 082521c1f10b531ae0d06c4013ba2cb8 165 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 7 123 7.4E-26 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TMO_1589 082521c1f10b531ae0d06c4013ba2cb8 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 123 1.0E-24 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TMO_1103 276ee3b8a92606d751655095b885c117 128 SMART SM00448 7 121 1.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1103 276ee3b8a92606d751655095b885c117 128 SUPERFAMILY SSF52172 7 126 8.54E-34 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1103 276ee3b8a92606d751655095b885c117 128 Pfam PF00072 Response regulator receiver domain 9 121 1.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_1103 276ee3b8a92606d751655095b885c117 128 Gene3D G3DSA:3.40.50.2300 2 125 2.7E-34 T 14-10-2018 TMO_0211 71df973a799e3e81fcd95db5997c9863 186 Pfam PF07484 Phage Tail Collar Domain 7 63 2.8E-21 T 14-10-2018 IPR011083 Phage tail collar domain TMO_0211 71df973a799e3e81fcd95db5997c9863 186 SUPERFAMILY SSF88874 1 176 4.84E-40 T 14-10-2018 TMO_0211 71df973a799e3e81fcd95db5997c9863 186 Gene3D G3DSA:3.90.1340.10 3 60 1.0E-12 T 14-10-2018 IPR037053 Phage tail collar domain superfamily TMO_0095 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Pfam PF00501 AMP-binding enzyme 89 526 1.9E-97 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0095 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 30 86 3.1E-22 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 TMO_0095 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 535 613 2.5E-24 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0095 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Gene3D G3DSA:3.40.50.12780 55 519 2.7E-109 T 14-10-2018 TMO_0095 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Gene3D G3DSA:3.30.300.30 522 651 1.6E-29 T 14-10-2018 TMO_0095 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 8 649 53.469 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 TMO_0095 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 SUPERFAMILY SSF56801 19 645 2.22E-185 T 14-10-2018 TMO_0095 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 265 276 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0095 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 27 645 0.0 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 TMO_a0119 3653f290a36bf64454588caa97e76ad0 169 SUPERFAMILY SSF81345 9 163 2.22E-34 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_a0119 3653f290a36bf64454588caa97e76ad0 169 Gene3D G3DSA:1.10.3470.10 2 168 4.4E-37 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_a0119 3653f290a36bf64454588caa97e76ad0 169 Pfam PF01032 FecCD transport family 13 162 2.0E-34 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_a0230 c474c3d3dff04adccc0980682890ce80 249 SUPERFAMILY SSF52540 6 245 1.58E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0230 c474c3d3dff04adccc0980682890ce80 249 SMART SM00382 30 224 2.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0230 c474c3d3dff04adccc0980682890ce80 249 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0230 c474c3d3dff04adccc0980682890ce80 249 Pfam PF00005 ABC transporter 22 176 4.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0230 c474c3d3dff04adccc0980682890ce80 249 Gene3D G3DSA:3.40.50.300 4 249 3.8E-58 T 14-10-2018 TMO_a0230 c474c3d3dff04adccc0980682890ce80 249 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 4.9E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_b0460 b97226a17680f0572d41119d613e3c55 168 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 66 79 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 TMO_b0460 b97226a17680f0572d41119d613e3c55 168 SUPERFAMILY SSF53218 1 153 1.26E-45 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_b0460 b97226a17680f0572d41119d613e3c55 168 SMART SM00852 4 150 1.2E-28 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_b0460 b97226a17680f0572d41119d613e3c55 168 Gene3D G3DSA:3.40.980.10 1 165 1.3E-55 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_b0460 b97226a17680f0572d41119d613e3c55 168 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 144 3.3E-35 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_b0460 b97226a17680f0572d41119d613e3c55 168 Pfam PF00994 Probable molybdopterin binding domain 4 148 2.1E-32 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_1425 3ec084e3631ca7b6df5a302c53dc8f1f 322 Gene3D G3DSA:3.40.190.10 118 255 1.2E-73 T 14-10-2018 TMO_1425 3ec084e3631ca7b6df5a302c53dc8f1f 322 SUPERFAMILY SSF53850 32 320 4.22E-54 T 14-10-2018 TMO_1425 3ec084e3631ca7b6df5a302c53dc8f1f 322 Gene3D G3DSA:3.40.190.10 38 318 1.2E-73 T 14-10-2018 TMO_1425 3ec084e3631ca7b6df5a302c53dc8f1f 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 318 4.7E-61 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_1425 3ec084e3631ca7b6df5a302c53dc8f1f 322 Pfam PF16868 NMT1-like family 38 318 1.2E-52 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family TMO_1102 2dbd202b839e62663b0f780c9419bfae 271 SUPERFAMILY SSF158791 176 241 1.31E-6 T 14-10-2018 TMO_b0533 0e636cd69830e4ec687932f31824c45e 424 Pfam PF00144 Beta-lactamase 42 399 5.3E-53 T 14-10-2018 IPR001466 Beta-lactamase-related TMO_b0533 0e636cd69830e4ec687932f31824c45e 424 Gene3D G3DSA:3.40.710.30 27 421 1.2E-108 T 14-10-2018 TMO_b0533 0e636cd69830e4ec687932f31824c45e 424 SUPERFAMILY SSF56601 31 411 3.75E-59 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 Gene3D G3DSA:1.20.140.160 137 282 7.9E-14 T 14-10-2018 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 PRINTS PR00046 Major sigma-70 factor signature 266 277 2.7E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 PRINTS PR00046 Major sigma-70 factor signature 75 88 2.7E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 PRINTS PR00046 Major sigma-70 factor signature 232 244 2.7E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 PRINTS PR00046 Major sigma-70 factor signature 251 266 2.7E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 PRINTS PR00046 Major sigma-70 factor signature 99 107 2.7E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 Pfam PF04545 Sigma-70, region 4 228 279 2.2E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 46 280 1.2E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 283 48.345 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 SUPERFAMILY SSF88659 188 281 1.33E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 251 277 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 13 280 9.4E-108 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 Pfam PF04542 Sigma-70 region 2 51 119 1.1E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 Gene3D G3DSA:1.10.601.10 11 118 2.5E-31 T 14-10-2018 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 SUPERFAMILY SSF88946 10 119 1.73E-39 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_0654 3d93fb391e407a3b8149672e30ef4580 315 Pfam PF00140 Sigma-70 factor, region 1.2 15 41 2.8E-8 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_3545 814f3bba2cc46d0fd73276ee0343fec2 89 SUPERFAMILY SSF47060 3 89 2.65E-36 T 14-10-2018 IPR009068 S15/NS1, RNA-binding TMO_3545 814f3bba2cc46d0fd73276ee0343fec2 89 Pfam PF00312 Ribosomal protein S15 8 88 2.8E-38 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_3545 814f3bba2cc46d0fd73276ee0343fec2 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 1.0E-39 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3545 814f3bba2cc46d0fd73276ee0343fec2 89 Gene3D G3DSA:1.10.287.10 2 89 6.6E-37 T 14-10-2018 TMO_3545 814f3bba2cc46d0fd73276ee0343fec2 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 2.0E-28 T 14-10-2018 TMO_3545 814f3bba2cc46d0fd73276ee0343fec2 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.189 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_3545 814f3bba2cc46d0fd73276ee0343fec2 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_3545 814f3bba2cc46d0fd73276ee0343fec2 89 SMART SM01387 8 88 8.0E-53 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_0997 3780f17e70b43cc847de6cfd503706e0 368 Pfam PF06674 Protein of unknown function (DUF1176) 40 362 3.9E-85 T 14-10-2018 IPR009560 Protein of unknown function DUF1176 TMO_a0576 8d35664c08db42fb4d37bc73c903ad56 857 Gene3D G3DSA:3.55.50.30 16 115 5.1E-25 T 14-10-2018 TMO_a0576 8d35664c08db42fb4d37bc73c903ad56 857 Gene3D G3DSA:2.40.170.20 292 857 3.8E-121 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_a0576 8d35664c08db42fb4d37bc73c903ad56 857 Gene3D G3DSA:2.170.130.10 117 243 7.9E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_a0576 8d35664c08db42fb4d37bc73c903ad56 857 SMART SM00965 46 96 1.0E-10 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_a0576 8d35664c08db42fb4d37bc73c903ad56 857 Pfam PF00593 TonB dependent receptor 434 856 1.5E-41 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_a0576 8d35664c08db42fb4d37bc73c903ad56 857 Pfam PF07715 TonB-dependent Receptor Plug Domain 121 226 7.5E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_a0576 8d35664c08db42fb4d37bc73c903ad56 857 SUPERFAMILY SSF56935 99 857 4.27E-82 T 14-10-2018 TMO_1352 1f57f3050e9471202be152e5b5472c4f 434 SUPERFAMILY SSF103473 24 430 2.22E-61 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_1352 1f57f3050e9471202be152e5b5472c4f 434 Gene3D G3DSA:1.20.1250.20 23 207 2.7E-43 T 14-10-2018 TMO_1352 1f57f3050e9471202be152e5b5472c4f 434 Gene3D G3DSA:1.20.1250.20 223 429 2.4E-13 T 14-10-2018 TMO_1352 1f57f3050e9471202be152e5b5472c4f 434 Pfam PF07690 Major Facilitator Superfamily 31 373 3.0E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_3164 5e15289e63af705989ac0c85a6dba65b 102 Gene3D G3DSA:3.30.1360.20 1 97 7.7E-37 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 TMO_3164 5e15289e63af705989ac0c85a6dba65b 102 SUPERFAMILY SSF55248 1 95 2.75E-33 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 TMO_3164 5e15289e63af705989ac0c85a6dba65b 102 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 23.87 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 TMO_3164 5e15289e63af705989ac0c85a6dba65b 102 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 93 1.4E-29 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 TMO_1952 21c121d7c77b1dc0e40ac1ffc2313583 411 SUPERFAMILY SSF53335 34 243 4.96E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1952 21c121d7c77b1dc0e40ac1ffc2313583 411 Gene3D G3DSA:3.40.50.150 31 249 5.4E-46 T 14-10-2018 TMO_1952 21c121d7c77b1dc0e40ac1ffc2313583 411 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 69 244 9.5E-29 T 14-10-2018 TMO_2526 f7a2f3954b327b697bc79c79de6f028e 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 425 1.1E-93 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_2526 f7a2f3954b327b697bc79c79de6f028e 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 420 8.2E-86 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_2526 f7a2f3954b327b697bc79c79de6f028e 431 PIRSF PIRSF006066 3 429 3.6E-90 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_2229 585d82ba607772475ddfa58925063bf9 504 SUPERFAMILY SSF52467 20 203 7.19E-9 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_2229 585d82ba607772475ddfa58925063bf9 504 Pfam PF13289 SIR2-like domain 103 242 1.6E-26 T 14-10-2018 IPR039444 SIR2-like domain TMO_b0238 eb3a3f7c943462848f77e677da2e967e 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 283 1.5E-29 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2262 dfa124b46b761495cceb06a66afe2ca6 78 SUPERFAMILY SSF82657 1 77 1.15E-25 T 14-10-2018 IPR036065 BolA-like superfamily TMO_2262 dfa124b46b761495cceb06a66afe2ca6 78 PIRSF PIRSF003113 1 78 8.6E-22 T 14-10-2018 IPR002634 BolA protein TMO_2262 dfa124b46b761495cceb06a66afe2ca6 78 Gene3D G3DSA:3.30.300.90 3 75 4.4E-31 T 14-10-2018 TMO_2262 dfa124b46b761495cceb06a66afe2ca6 78 Pfam PF01722 BolA-like protein 27 77 7.3E-16 T 14-10-2018 IPR002634 BolA protein TMO_a0124 a50940e2bbfeead77605351e953e92f3 297 Pfam PF12833 Helix-turn-helix domain 215 293 1.8E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0124 a50940e2bbfeead77605351e953e92f3 297 SUPERFAMILY SSF46689 193 243 9.41E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0124 a50940e2bbfeead77605351e953e92f3 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_a0124 a50940e2bbfeead77605351e953e92f3 297 Gene3D G3DSA:1.10.10.60 188 245 1.8E-13 T 14-10-2018 TMO_a0124 a50940e2bbfeead77605351e953e92f3 297 Gene3D G3DSA:1.10.10.60 246 296 2.4E-16 T 14-10-2018 TMO_a0124 a50940e2bbfeead77605351e953e92f3 297 SMART SM00342 209 292 4.3E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0124 a50940e2bbfeead77605351e953e92f3 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 276 3.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_a0124 a50940e2bbfeead77605351e953e92f3 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 292 3.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_a0124 a50940e2bbfeead77605351e953e92f3 297 SUPERFAMILY SSF46689 246 295 3.67E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1345 75c1b776517e81733b8e9cfd735b02d8 892 Gene3D G3DSA:3.90.550.10 427 651 1.6E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_1345 75c1b776517e81733b8e9cfd735b02d8 892 SUPERFAMILY SSF53448 435 689 4.84E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_1345 75c1b776517e81733b8e9cfd735b02d8 892 SUPERFAMILY SSF51445 55 317 3.56E-51 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_1345 75c1b776517e81733b8e9cfd735b02d8 892 Gene3D G3DSA:3.20.20.80 57 318 5.7E-13 T 14-10-2018 TMO_1345 75c1b776517e81733b8e9cfd735b02d8 892 Pfam PF00332 Glycosyl hydrolases family 17 240 317 9.5E-10 T 14-10-2018 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 TMO_1345 75c1b776517e81733b8e9cfd735b02d8 892 Pfam PF13641 Glycosyltransferase like family 2 438 667 2.6E-37 T 14-10-2018 TMO_3554 f00cab667ca461a92d4d0c8a75a6f4ac 271 SUPERFAMILY SSF69572 4 263 1.01E-90 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 TMO_3554 f00cab667ca461a92d4d0c8a75a6f4ac 271 Gene3D G3DSA:3.40.50.720 6 263 1.0E-85 T 14-10-2018 TMO_3554 f00cab667ca461a92d4d0c8a75a6f4ac 271 Pfam PF00899 ThiF family 14 254 7.0E-62 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 TMO_0239 3255ce86b0a9ddaba69479d33da0db92 173 Gene3D G3DSA:3.10.129.10 25 170 5.6E-41 T 14-10-2018 TMO_0239 3255ce86b0a9ddaba69479d33da0db92 173 Pfam PF03061 Thioesterase superfamily 79 156 1.1E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_0239 3255ce86b0a9ddaba69479d33da0db92 173 SUPERFAMILY SSF54637 25 163 3.82E-37 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0239 3255ce86b0a9ddaba69479d33da0db92 173 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 74 165 2.3E-24 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_1608 afac391346dd36e2ea718dcca0cb4ab3 369 Gene3D G3DSA:3.40.190.10 156 327 5.6E-111 T 14-10-2018 TMO_1608 afac391346dd36e2ea718dcca0cb4ab3 369 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 21 2.7E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_1608 afac391346dd36e2ea718dcca0cb4ab3 369 Gene3D G3DSA:3.40.190.170 36 342 5.6E-111 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_1608 afac391346dd36e2ea718dcca0cb4ab3 369 SUPERFAMILY SSF53850 146 232 8.14E-5 T 14-10-2018 TMO_1608 afac391346dd36e2ea718dcca0cb4ab3 369 PIRSF PIRSF039026 1 363 3.9E-125 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like TMO_1608 afac391346dd36e2ea718dcca0cb4ab3 369 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 21 2.2E-6 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_1608 afac391346dd36e2ea718dcca0cb4ab3 369 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 323 1.5E-48 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_d0032 c27e44c2de2b1a95f022b8e2b7d589a7 375 SUPERFAMILY SSF53850 171 252 4.04E-7 T 14-10-2018 TMO_d0032 c27e44c2de2b1a95f022b8e2b7d589a7 375 Gene3D G3DSA:3.40.190.170 62 375 2.8E-100 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_d0032 c27e44c2de2b1a95f022b8e2b7d589a7 375 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 84 348 2.0E-20 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_d0032 c27e44c2de2b1a95f022b8e2b7d589a7 375 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 30 58 1.6E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_0833 35e22c93184009f3b570e7db41d57a64 68 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_0833 35e22c93184009f3b570e7db41d57a64 68 Gene3D G3DSA:1.20.5.1150 14 67 1.8E-9 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0833 35e22c93184009f3b570e7db41d57a64 68 PRINTS PR00976 Ribosomal protein S21 family signature 35 45 1.3E-5 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0833 35e22c93184009f3b570e7db41d57a64 68 PRINTS PR00976 Ribosomal protein S21 family signature 23 33 1.3E-5 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0833 35e22c93184009f3b570e7db41d57a64 68 PRINTS PR00976 Ribosomal protein S21 family signature 11 20 1.3E-5 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0833 35e22c93184009f3b570e7db41d57a64 68 Pfam PF01165 Ribosomal protein S21 2 55 4.8E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0833 35e22c93184009f3b570e7db41d57a64 68 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 40 2.0E-8 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0833 35e22c93184009f3b570e7db41d57a64 68 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 6.7E-23 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_0833 35e22c93184009f3b570e7db41d57a64 68 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 55 13.901 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_c0183 d672c8c73bd46d391d996850f3abb698 687 Gene3D G3DSA:3.40.350.10 93 239 6.9E-39 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TMO_c0183 d672c8c73bd46d391d996850f3abb698 687 SUPERFAMILY SSF53092 97 222 4.01E-10 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TMO_c0183 d672c8c73bd46d391d996850f3abb698 687 Pfam PF16189 Creatinase/Prolidase N-terminal domain 242 399 4.1E-35 T 14-10-2018 TMO_c0183 d672c8c73bd46d391d996850f3abb698 687 SUPERFAMILY SSF55920 396 650 2.62E-59 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like TMO_c0183 d672c8c73bd46d391d996850f3abb698 687 Pfam PF16188 C-terminal region of peptidase_M24 624 684 6.0E-22 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain TMO_c0183 d672c8c73bd46d391d996850f3abb698 687 Pfam PF01321 Creatinase/Prolidase N-terminal domain 100 232 2.8E-17 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 TMO_c0183 d672c8c73bd46d391d996850f3abb698 687 Gene3D G3DSA:3.40.350.10 241 388 3.1E-24 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TMO_c0183 d672c8c73bd46d391d996850f3abb698 687 Gene3D G3DSA:3.90.230.10 393 686 6.3E-97 T 14-10-2018 TMO_c0183 d672c8c73bd46d391d996850f3abb698 687 Pfam PF00557 Metallopeptidase family M24 403 614 3.1E-45 T 14-10-2018 IPR000994 Peptidase M24 TMO_0682 96063dfef65070d979a740c7bfe6b75a 143 Pfam PF07883 Cupin domain 72 132 3.1E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_0682 96063dfef65070d979a740c7bfe6b75a 143 Gene3D G3DSA:2.60.120.10 23 143 1.2E-41 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_0682 96063dfef65070d979a740c7bfe6b75a 143 SUPERFAMILY SSF51182 19 138 6.61E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_2595 ecea124dd9aacc3e10971d30aa04b380 158 Pfam PF11157 Protein of unknown function (DUF2937) 68 155 5.7E-16 T 14-10-2018 IPR022584 Protein of unknown function DUF2937 TMO_2505 c8629b93a21f424512e23e232def3a21 404 SUPERFAMILY SSF52833 15 164 1.22E-7 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_2505 c8629b93a21f424512e23e232def3a21 404 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 285 372 6.2E-12 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 TMO_2505 c8629b93a21f424512e23e232def3a21 404 SMART SM00702 193 373 2.9E-6 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 TMO_2505 c8629b93a21f424512e23e232def3a21 404 Gene3D G3DSA:2.60.120.620 192 372 1.3E-29 T 14-10-2018 TMO_c0141 5eff9608bbc2af483b0868afe7fd455c 248 Pfam PF00072 Response regulator receiver domain 18 127 2.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0141 5eff9608bbc2af483b0868afe7fd455c 248 Gene3D G3DSA:1.10.10.10 149 248 1.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0141 5eff9608bbc2af483b0868afe7fd455c 248 SUPERFAMILY SSF46894 153 245 8.5E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_c0141 5eff9608bbc2af483b0868afe7fd455c 248 SMART SM00448 16 126 1.3E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_c0141 5eff9608bbc2af483b0868afe7fd455c 248 SMART SM00862 171 244 2.4E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_c0141 5eff9608bbc2af483b0868afe7fd455c 248 SUPERFAMILY SSF52172 10 137 4.7E-40 T 14-10-2018 IPR011006 CheY-like superfamily TMO_c0141 5eff9608bbc2af483b0868afe7fd455c 248 Gene3D G3DSA:3.40.50.2300 6 139 2.1E-36 T 14-10-2018 TMO_c0141 5eff9608bbc2af483b0868afe7fd455c 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 172 244 4.1E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 SUPERFAMILY SSF52317 1 191 3.11E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 43 57 6.6E-7 T 14-10-2018 TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 6.6E-7 T 14-10-2018 TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 Pfam PF00425 chorismate binding enzyme 438 695 2.8E-80 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 Pfam PF00117 Glutamine amidotransferase class-I 1 189 1.1E-38 T 14-10-2018 IPR017926 Glutamine amidotransferase TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 189 3.5E-42 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 Gene3D G3DSA:3.60.120.10 331 704 7.9E-119 T 14-10-2018 IPR005801 ADC synthase GO:0009058 TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 Gene3D G3DSA:3.40.50.880 1 191 8.6E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 SUPERFAMILY SSF56322 250 703 4.71E-106 T 14-10-2018 IPR005801 ADC synthase GO:0009058 TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 PRINTS PR00095 Anthranilate synthase component I signature 554 567 2.6E-15 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 PRINTS PR00095 Anthranilate synthase component I signature 637 651 2.6E-15 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 PRINTS PR00095 Anthranilate synthase component I signature 652 666 2.6E-15 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_0539 f8855a28f4a065e93acceaad25653dfe 711 PRINTS PR00095 Anthranilate synthase component I signature 540 553 2.6E-15 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TMO_3235 e11b0c7b9247671eba3c5295339420f8 290 Gene3D G3DSA:3.20.20.70 16 288 3.3E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3235 e11b0c7b9247671eba3c5295339420f8 290 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 64 77 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TMO_3235 e11b0c7b9247671eba3c5295339420f8 290 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 30 282 36.074 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TMO_3235 e11b0c7b9247671eba3c5295339420f8 290 Pfam PF00290 Tryptophan synthase alpha chain 24 262 5.1E-93 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TMO_3235 e11b0c7b9247671eba3c5295339420f8 290 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 24 277 4.9E-77 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TMO_3235 e11b0c7b9247671eba3c5295339420f8 290 SUPERFAMILY SSF51366 19 263 8.01E-87 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TMO_3450 51aefa4e23b2ceebc840d94853f8d383 175 Pfam PF00719 Inorganic pyrophosphatase 18 171 5.8E-55 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TMO_3450 51aefa4e23b2ceebc840d94853f8d383 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TMO_3450 51aefa4e23b2ceebc840d94853f8d383 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.522 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TMO_3450 51aefa4e23b2ceebc840d94853f8d383 175 Gene3D G3DSA:3.90.80.10 1 175 1.8E-71 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TMO_3450 51aefa4e23b2ceebc840d94853f8d383 175 SUPERFAMILY SSF50324 5 173 2.75E-66 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TMO_3498 eceb98577700fa65693bdafd3dfdb034 849 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 533 821 5.1E-93 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal TMO_3498 eceb98577700fa65693bdafd3dfdb034 849 SUPERFAMILY SSF55729 639 819 1.3E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_3498 eceb98577700fa65693bdafd3dfdb034 849 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 16 293 2.2E-7 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD TMO_2353 f310d64db2140b9aa7606e5cf272ba47 485 Gene3D G3DSA:3.40.630.30 262 424 1.3E-10 T 14-10-2018 TMO_2353 f310d64db2140b9aa7606e5cf272ba47 485 SUPERFAMILY SSF55729 258 423 1.71E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2807 90a333f8d80084c7cb944f74811703a9 227 Pfam PF02104 SURF1 family 3 214 7.7E-42 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_b0155 f179665758a49aebef383527a35b49d6 95 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 90 1.9E-7 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_b0155 f179665758a49aebef383527a35b49d6 95 Gene3D G3DSA:3.30.2310.20 1 91 9.8E-22 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_b0155 f179665758a49aebef383527a35b49d6 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 90 6.5E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_a0224 28ceadaed17e6cb83327e6940391c431 434 ProSitePatterns PS00066 Hydroxymethylglutaryl-coenzyme A reductases signature 1. 182 196 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 TMO_a0224 28ceadaed17e6cb83327e6940391c431 434 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 331 338 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 TMO_a0224 28ceadaed17e6cb83327e6940391c431 434 ProSitePatterns PS01192 Hydroxymethylglutaryl-coenzyme A reductases signature 3. 377 390 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 TMO_a0224 28ceadaed17e6cb83327e6940391c431 434 Gene3D G3DSA:1.10.8.660 382 433 1.4E-15 T 14-10-2018 TMO_a0224 28ceadaed17e6cb83327e6940391c431 434 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 8 392 1.4E-125 T 14-10-2018 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 TMO_a0224 28ceadaed17e6cb83327e6940391c431 434 Gene3D G3DSA:3.90.770.10 20 378 3.6E-136 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 TMO_a0224 28ceadaed17e6cb83327e6940391c431 434 SUPERFAMILY SSF55035 117 225 1.18E-31 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 TMO_a0224 28ceadaed17e6cb83327e6940391c431 434 Gene3D G3DSA:3.30.70.420 116 226 3.6E-136 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 TMO_a0224 28ceadaed17e6cb83327e6940391c431 434 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 22 392 3.3E-109 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 TMO_a0224 28ceadaed17e6cb83327e6940391c431 434 SUPERFAMILY SSF56542 12 432 1.31E-97 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 TMO_0003 88a661021146f11a64451159b974d66c 421 Gene3D G3DSA:3.40.50.300 32 377 1.6E-73 T 14-10-2018 TMO_0003 88a661021146f11a64451159b974d66c 421 ProSitePatterns PS00617 RecF protein signature 1. 152 172 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 TMO_0003 88a661021146f11a64451159b974d66c 421 SUPERFAMILY SSF52540 28 383 4.16E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0003 88a661021146f11a64451159b974d66c 421 SMART SM00382 47 395 0.0045 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0003 88a661021146f11a64451159b974d66c 421 ProSitePatterns PS00618 RecF protein signature 2. 342 360 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 TMO_0003 88a661021146f11a64451159b974d66c 421 Gene3D G3DSA:1.20.1050.90 155 341 1.6E-73 T 14-10-2018 TMO_0003 88a661021146f11a64451159b974d66c 421 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 421 76.411 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 TMO_0003 88a661021146f11a64451159b974d66c 421 Pfam PF02463 RecF/RecN/SMC N terminal domain 28 368 1.9E-16 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TMO_b0510 741d84d37ee5406a5c87cde36ce8d73f 254 Gene3D G3DSA:3.40.50.720 15 254 2.8E-54 T 14-10-2018 TMO_b0510 741d84d37ee5406a5c87cde36ce8d73f 254 SUPERFAMILY SSF51735 17 244 2.52E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0510 741d84d37ee5406a5c87cde36ce8d73f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 3.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0510 741d84d37ee5406a5c87cde36ce8d73f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 3.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0510 741d84d37ee5406a5c87cde36ce8d73f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0510 741d84d37ee5406a5c87cde36ce8d73f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0510 741d84d37ee5406a5c87cde36ce8d73f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0510 741d84d37ee5406a5c87cde36ce8d73f 254 Pfam PF00106 short chain dehydrogenase 18 210 1.0E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1351 b2e95cafcdf121ef6260c6359dda0da1 398 Gene3D G3DSA:3.90.230.10 158 396 8.1E-48 T 14-10-2018 TMO_1351 b2e95cafcdf121ef6260c6359dda0da1 398 Pfam PF01321 Creatinase/Prolidase N-terminal domain 27 159 4.3E-17 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 TMO_1351 b2e95cafcdf121ef6260c6359dda0da1 398 Gene3D G3DSA:3.40.350.10 20 153 1.4E-22 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TMO_1351 b2e95cafcdf121ef6260c6359dda0da1 398 SUPERFAMILY SSF53092 20 140 2.96E-21 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TMO_1351 b2e95cafcdf121ef6260c6359dda0da1 398 SUPERFAMILY SSF55920 158 392 9.94E-49 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like TMO_1351 b2e95cafcdf121ef6260c6359dda0da1 398 Pfam PF00557 Metallopeptidase family M24 168 378 2.8E-30 T 14-10-2018 IPR000994 Peptidase M24 TMO_1969 b600f81c8929fe49f153d591d63a6df1 204 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 168 3.8E-39 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1969 b600f81c8929fe49f153d591d63a6df1 204 Gene3D G3DSA:1.20.120.1200 4 170 7.2E-44 T 14-10-2018 TMO_b0116 b78056f762cb1e2fc2afccf2a2ee5d7a 107 SUPERFAMILY SSF50022 6 106 1.57E-24 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_b0116 b78056f762cb1e2fc2afccf2a2ee5d7a 107 Pfam PF00355 Rieske [2Fe-2S] domain 7 85 2.9E-14 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_b0116 b78056f762cb1e2fc2afccf2a2ee5d7a 107 Gene3D G3DSA:2.102.10.10 4 106 6.5E-26 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_3064 43600af2829aa88a93bd97065c7bf4d9 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 3.2E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0697 cbf4ce2f6b7ae9fe121d19172f33f7e4 247 SMART SM00421 182 239 3.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0697 cbf4ce2f6b7ae9fe121d19172f33f7e4 247 SUPERFAMILY SSF75516 13 172 2.22E-38 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily TMO_c0697 cbf4ce2f6b7ae9fe121d19172f33f7e4 247 Pfam PF03472 Autoinducer binding domain 27 168 4.8E-32 T 14-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain TMO_c0697 cbf4ce2f6b7ae9fe121d19172f33f7e4 247 Gene3D G3DSA:3.30.450.80 16 174 2.2E-32 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily TMO_c0697 cbf4ce2f6b7ae9fe121d19172f33f7e4 247 Pfam PF00196 Bacterial regulatory proteins, luxR family 184 238 2.1E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0697 cbf4ce2f6b7ae9fe121d19172f33f7e4 247 Gene3D G3DSA:1.10.10.10 180 245 1.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0697 cbf4ce2f6b7ae9fe121d19172f33f7e4 247 SUPERFAMILY SSF46894 172 245 1.19E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_c0697 cbf4ce2f6b7ae9fe121d19172f33f7e4 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 199 215 3.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0697 cbf4ce2f6b7ae9fe121d19172f33f7e4 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 199 3.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0697 cbf4ce2f6b7ae9fe121d19172f33f7e4 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 215 227 3.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_0322 7d0adb4ac84fee2ecc72690f9273b689 276 SUPERFAMILY SSF161098 80 264 1.03E-25 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0322 7d0adb4ac84fee2ecc72690f9273b689 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 272 4.2E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0322 7d0adb4ac84fee2ecc72690f9273b689 276 Gene3D G3DSA:1.10.3720.10 83 272 2.7E-19 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0322 7d0adb4ac84fee2ecc72690f9273b689 276 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 68 266 4.9E-68 T 14-10-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 TMO_c0743 3fbb1bf816895079bf611c3495276394 233 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 17 187 1.5E-12 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system TMO_c0054 3c79918e0b09e770897a84166f20d22e 688 Gene3D G3DSA:3.40.50.300 377 618 1.3E-26 T 14-10-2018 TMO_c0054 3c79918e0b09e770897a84166f20d22e 688 Gene3D G3DSA:3.40.50.300 112 290 6.4E-8 T 14-10-2018 TMO_c0054 3c79918e0b09e770897a84166f20d22e 688 SUPERFAMILY SSF52540 104 617 1.73E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0054 3c79918e0b09e770897a84166f20d22e 688 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 1 615 0.0 T 14-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 TMO_c0054 3c79918e0b09e770897a84166f20d22e 688 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 2 615 1.6E-252 T 14-10-2018 IPR022458 Conjugative coupling factor TraG/TraD TMO_c0054 3c79918e0b09e770897a84166f20d22e 688 Pfam PF12696 TraM recognition site of TraD and TraG 467 594 3.2E-10 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site TMO_b0111 986f131fb2afa5f6bf4dd87ffe54804d 171 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 152 1.7E-13 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_3307 0266c3ab1f561824db7269b218c88eb4 300 SUPERFAMILY SSF82861 23 108 1.57E-18 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TMO_3307 0266c3ab1f561824db7269b218c88eb4 300 SUPERFAMILY SSF82689 176 273 4.32E-30 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TMO_3307 0266c3ab1f561824db7269b218c88eb4 300 Gene3D G3DSA:3.30.70.100 175 268 6.7E-25 T 14-10-2018 TMO_3307 0266c3ab1f561824db7269b218c88eb4 300 Gene3D G3DSA:2.30.30.60 125 174 2.3E-16 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TMO_3307 0266c3ab1f561824db7269b218c88eb4 300 Pfam PF00924 Mechanosensitive ion channel 68 264 7.8E-51 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TMO_3307 0266c3ab1f561824db7269b218c88eb4 300 SUPERFAMILY SSF50182 110 174 2.16E-16 T 14-10-2018 IPR010920 LSM domain superfamily TMO_c0703 512cbe254eb3c29655ddb28442c684b4 463 Gene3D G3DSA:2.60.40.3500 60 179 2.3E-24 T 14-10-2018 TMO_c0703 512cbe254eb3c29655ddb28442c684b4 463 Gene3D G3DSA:3.40.630.40 233 462 3.2E-73 T 14-10-2018 TMO_c0703 512cbe254eb3c29655ddb28442c684b4 463 SUPERFAMILY SSF53187 235 454 1.63E-50 T 14-10-2018 TMO_c0703 512cbe254eb3c29655ddb28442c684b4 463 SMART SM00646 297 451 2.2E-46 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TMO_c0703 512cbe254eb3c29655ddb28442c684b4 463 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 237 451 1.8E-47 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TMO_c0703 512cbe254eb3c29655ddb28442c684b4 463 Pfam PF11741 AMIN domain 82 155 1.9E-13 T 14-10-2018 IPR021731 AMIN domain TMO_1074 a0247d3c07a64d8d3aa54512a64896a9 158 TIGRFAM TIGR00208 fliS: flagellar protein FliS 8 120 1.8E-25 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TMO_1074 a0247d3c07a64d8d3aa54512a64896a9 158 Gene3D G3DSA:1.20.120.340 1 127 3.5E-37 T 14-10-2018 TMO_1074 a0247d3c07a64d8d3aa54512a64896a9 158 Pfam PF02561 Flagellar protein FliS 10 121 2.2E-35 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TMO_1074 a0247d3c07a64d8d3aa54512a64896a9 158 SUPERFAMILY SSF101116 9 122 2.88E-31 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 TMO_b0389 c9d44428a699cc0d84755eb3e0144ab9 148 SUPERFAMILY SSF160631 58 147 5.36E-6 T 14-10-2018 TMO_d0038 fd0e2f4304bc30df5bcd800b4984c44d 476 SUPERFAMILY SSF53067 240 451 9.28E-41 T 14-10-2018 TMO_d0038 fd0e2f4304bc30df5bcd800b4984c44d 476 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 128 140 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TMO_d0038 fd0e2f4304bc30df5bcd800b4984c44d 476 SUPERFAMILY SSF53067 4 241 8.91E-69 T 14-10-2018 TMO_d0038 fd0e2f4304bc30df5bcd800b4984c44d 476 Gene3D G3DSA:3.30.420.40 240 474 1.5E-49 T 14-10-2018 TMO_d0038 fd0e2f4304bc30df5bcd800b4984c44d 476 PIRSF PIRSF000538 1 450 8.1E-99 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TMO_d0038 fd0e2f4304bc30df5bcd800b4984c44d 476 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 218 1.6E-47 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TMO_d0038 fd0e2f4304bc30df5bcd800b4984c44d 476 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 248 433 6.9E-32 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TMO_d0038 fd0e2f4304bc30df5bcd800b4984c44d 476 Gene3D G3DSA:3.30.420.40 2 239 9.5E-71 T 14-10-2018 TMO_a0080 9f07a9b59110e7d19e6b395ccf7baf88 169 Gene3D G3DSA:2.60.40.4150 32 164 6.0E-37 T 14-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily TMO_a0080 9f07a9b59110e7d19e6b395ccf7baf88 169 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 2 157 8.7E-35 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN TMO_a0080 9f07a9b59110e7d19e6b395ccf7baf88 169 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 38 154 1.8E-33 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN TMO_3165 0b43d4727e2d526c7a8fb345b9edbdb9 145 Pfam PF06262 Zincin-like metallopeptidase 45 143 9.6E-34 T 14-10-2018 IPR010428 Zincin-like metallopeptidase TMO_3165 0b43d4727e2d526c7a8fb345b9edbdb9 145 Gene3D G3DSA:3.30.2010.20 18 143 1.3E-31 T 14-10-2018 IPR038555 Zincin-like metallopeptidase superfamily TMO_3165 0b43d4727e2d526c7a8fb345b9edbdb9 145 SUPERFAMILY SSF55486 16 143 3.19E-33 T 14-10-2018 TMO_c0063 280f1dfa619cd8f10456176a09e2081e 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 7.2E-9 T 14-10-2018 TMO_c0063 280f1dfa619cd8f10456176a09e2081e 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 7.2E-9 T 14-10-2018 TMO_c0063 280f1dfa619cd8f10456176a09e2081e 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 113 7.2E-9 T 14-10-2018 TMO_c0063 280f1dfa619cd8f10456176a09e2081e 369 SUPERFAMILY SSF53335 18 190 1.19E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0063 280f1dfa619cd8f10456176a09e2081e 369 Gene3D G3DSA:3.40.50.150 20 199 1.4E-17 T 14-10-2018 TMO_c0063 280f1dfa619cd8f10456176a09e2081e 369 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 104 110 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TMO_b0073 9586f77957c1fd83860b0f6d82e55df0 176 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 34 167 3.1E-17 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_a0577 f08a60d83bf65526cfdf280cf24ed4cd 309 Pfam PF16220 Domain of unknown function (DUF4880) 12 53 4.9E-8 T 14-10-2018 IPR032623 FecR, N-terminal TMO_a0577 f08a60d83bf65526cfdf280cf24ed4cd 309 Gene3D G3DSA:2.60.120.1440 86 221 7.3E-12 T 14-10-2018 TMO_a0577 f08a60d83bf65526cfdf280cf24ed4cd 309 Pfam PF04773 FecR protein 105 192 2.4E-14 T 14-10-2018 IPR006860 FecR protein TMO_a0577 f08a60d83bf65526cfdf280cf24ed4cd 309 PIRSF PIRSF018266 1 308 1.8E-64 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_2499 a8f976a19622d964514302ce6dc2dec4 177 SUPERFAMILY SSF69118 3 175 1.2E-47 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_2499 a8f976a19622d964514302ce6dc2dec4 177 Gene3D G3DSA:1.20.1290.10 1 177 8.6E-70 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TMO_2499 a8f976a19622d964514302ce6dc2dec4 177 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 177 83.496 T 14-10-2018 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_2499 a8f976a19622d964514302ce6dc2dec4 177 TIGRFAM TIGR00777 ahpD: alkylhydroperoxidase, AhpD family 2 176 8.3E-76 T 14-10-2018 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_2499 a8f976a19622d964514302ce6dc2dec4 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 112 160 3.2E-15 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_2499 a8f976a19622d964514302ce6dc2dec4 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 96 175 7.0E-14 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_b0153 7c44610b29ab796810e8c171683a40b4 262 SMART SM00382 35 225 2.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0153 7c44610b29ab796810e8c171683a40b4 262 SUPERFAMILY SSF52540 6 237 1.54E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0153 7c44610b29ab796810e8c171683a40b4 262 Gene3D G3DSA:3.40.50.300 5 259 1.8E-61 T 14-10-2018 TMO_b0153 7c44610b29ab796810e8c171683a40b4 262 Pfam PF00005 ABC transporter 29 165 1.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0259 f132d45feba73a78a99a68774a0ce551 310 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 234 1.6E-31 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_b0259 f132d45feba73a78a99a68774a0ce551 310 PIRSF PIRSF015582 1 309 6.8E-60 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like TMO_b0259 f132d45feba73a78a99a68774a0ce551 310 SUPERFAMILY SSF51621 14 244 2.16E-44 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_b0259 f132d45feba73a78a99a68774a0ce551 310 Gene3D G3DSA:3.20.20.60 6 301 6.0E-65 T 14-10-2018 TMO_a0025 08020ae0d0cb1408a7c76be95317e0ee 239 SUPERFAMILY SSF161098 91 207 6.54E-10 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0025 08020ae0d0cb1408a7c76be95317e0ee 239 Gene3D G3DSA:1.10.3720.10 84 212 4.6E-10 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0025 08020ae0d0cb1408a7c76be95317e0ee 239 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 208 7.7E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0659 a6b10070b5e6745fd466253e0bb32149 318 Pfam PF05013 N-formylglutamate amidohydrolase 43 277 1.2E-72 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase TMO_0659 a6b10070b5e6745fd466253e0bb32149 318 SUPERFAMILY SSF53187 32 302 8.79E-86 T 14-10-2018 TMO_0659 a6b10070b5e6745fd466253e0bb32149 318 Gene3D G3DSA:3.40.630.40 22 306 2.1E-100 T 14-10-2018 TMO_0087 8b504e168efdf037044490d664b71953 348 SUPERFAMILY SSF52540 9 347 3.8E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0087 8b504e168efdf037044490d664b71953 348 Pfam PF13469 Sulfotransferase family 11 299 1.1E-13 T 14-10-2018 TMO_c0045 e07ae40d80b8d15c5ca0a2002fecf75d 127 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 35 109 4.9E-28 T 14-10-2018 IPR019110 Uncharacterised protein family, RAQPRD TMO_c0045 e07ae40d80b8d15c5ca0a2002fecf75d 127 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 19 110 4.5E-35 T 14-10-2018 IPR019110 Uncharacterised protein family, RAQPRD TMO_0461 f0320d8a561f25b3ee475794a6c30e9e 172 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 14 130 1.1E-17 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TMO_0461 f0320d8a561f25b3ee475794a6c30e9e 172 SMART SM00226 12 149 1.3E-36 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TMO_0461 f0320d8a561f25b3ee475794a6c30e9e 172 Gene3D G3DSA:3.40.50.2300 10 150 1.7E-41 T 14-10-2018 TMO_0461 f0320d8a561f25b3ee475794a6c30e9e 172 SUPERFAMILY SSF52788 12 148 1.31E-41 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily TMO_0183 fed3b30384cb3cb24b62f0e88754e76f 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 218 2.0E-16 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TMO_0183 fed3b30384cb3cb24b62f0e88754e76f 323 SUPERFAMILY SSF51735 4 261 1.39E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0183 fed3b30384cb3cb24b62f0e88754e76f 323 Gene3D G3DSA:3.40.50.720 7 279 5.0E-52 T 14-10-2018 TMO_1249 ba1228acd2f5f46a10057a35ec9aafd1 259 Gene3D G3DSA:2.30.30.910 86 214 5.9E-29 T 14-10-2018 TMO_1249 ba1228acd2f5f46a10057a35ec9aafd1 259 Gene3D G3DSA:2.60.40.4070 102 187 5.9E-29 T 14-10-2018 TMO_1249 ba1228acd2f5f46a10057a35ec9aafd1 259 Pfam PF13860 FlgD Ig-like domain 102 176 2.2E-19 T 14-10-2018 IPR025965 FlgD Ig-like domain TMO_1249 ba1228acd2f5f46a10057a35ec9aafd1 259 Pfam PF03963 Flagellar hook capping protein - N-terminal region 5 77 4.9E-19 T 14-10-2018 IPR005648 Flagellar hook capping protein TMO_1249 ba1228acd2f5f46a10057a35ec9aafd1 259 Pfam PF13861 FlgD Tudor-like domain 85 217 1.4E-13 T 14-10-2018 IPR025963 FlgD Tudor-like domain TMO_1007 65884d0396ef7a2c026824335474a38a 543 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 474 2.7E-139 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 TMO_1007 65884d0396ef7a2c026824335474a38a 543 Gene3D G3DSA:2.40.50.140 31 175 2.9E-26 T 14-10-2018 TMO_1007 65884d0396ef7a2c026824335474a38a 543 SUPERFAMILY SSF50249 39 175 3.71E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_1007 65884d0396ef7a2c026824335474a38a 543 Pfam PF10150 Ribonuclease E/G family 171 440 2.2E-94 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 TMO_0129 bec1a26abc27148a9e9b6dcbd12d6561 180 SUPERFAMILY SSF53271 8 176 7.47E-46 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like TMO_0129 bec1a26abc27148a9e9b6dcbd12d6561 180 Pfam PF00156 Phosphoribosyl transferase domain 15 162 3.9E-19 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TMO_0129 bec1a26abc27148a9e9b6dcbd12d6561 180 Gene3D G3DSA:3.40.50.2020 6 180 9.0E-57 T 14-10-2018 TMO_0129 bec1a26abc27148a9e9b6dcbd12d6561 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 10 175 2.6E-49 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 TMO_3430 a23c7dbf02e6b1387ca293082511edd4 169 Pfam PF03734 L,D-transpeptidase catalytic domain 17 162 8.6E-10 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 TMO_3430 a23c7dbf02e6b1387ca293082511edd4 169 SUPERFAMILY SSF141523 19 165 6.28E-5 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like TMO_0415 5cefd72d51951c22c6cf6ec94fc913ca 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.4E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0415 5cefd72d51951c22c6cf6ec94fc913ca 296 SUPERFAMILY SSF46785 4 112 5.69E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0415 5cefd72d51951c22c6cf6ec94fc913ca 296 Gene3D G3DSA:1.10.10.10 2 85 4.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0415 5cefd72d51951c22c6cf6ec94fc913ca 296 Pfam PF03466 LysR substrate binding domain 89 292 5.5E-36 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0415 5cefd72d51951c22c6cf6ec94fc913ca 296 Gene3D G3DSA:3.40.190.10 164 267 2.0E-50 T 14-10-2018 TMO_0415 5cefd72d51951c22c6cf6ec94fc913ca 296 Gene3D G3DSA:3.40.190.10 96 272 2.0E-50 T 14-10-2018 TMO_0415 5cefd72d51951c22c6cf6ec94fc913ca 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0415 5cefd72d51951c22c6cf6ec94fc913ca 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0415 5cefd72d51951c22c6cf6ec94fc913ca 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_0415 5cefd72d51951c22c6cf6ec94fc913ca 296 SUPERFAMILY SSF53850 87 294 8.38E-33 T 14-10-2018 TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 3.3E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.3E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 3.3E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 SUPERFAMILY SSF51735 1 234 1.12E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 6.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 35 52 6.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 6.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 Gene3D G3DSA:3.40.50.720 1 244 2.8E-62 T 14-10-2018 TMO_c0128 a47ec8b4b6a4af2e00f813ce81ea9911 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 3 232 2.4E-42 T 14-10-2018 TMO_c0117 fb52bfd1ad96dc88ae716c5dde4dd156 296 Gene3D G3DSA:3.40.190.290 90 291 3.6E-51 T 14-10-2018 TMO_c0117 fb52bfd1ad96dc88ae716c5dde4dd156 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0117 fb52bfd1ad96dc88ae716c5dde4dd156 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0117 fb52bfd1ad96dc88ae716c5dde4dd156 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0117 fb52bfd1ad96dc88ae716c5dde4dd156 296 Pfam PF03466 LysR substrate binding domain 87 290 4.7E-42 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0117 fb52bfd1ad96dc88ae716c5dde4dd156 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0117 fb52bfd1ad96dc88ae716c5dde4dd156 296 SUPERFAMILY SSF53850 89 294 1.59E-44 T 14-10-2018 TMO_c0117 fb52bfd1ad96dc88ae716c5dde4dd156 296 Gene3D G3DSA:1.10.10.10 1 85 2.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0117 fb52bfd1ad96dc88ae716c5dde4dd156 296 SUPERFAMILY SSF46785 1 111 9.68E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1162 3be85ed03311f34264a9e4b89c2fad7e 119 Pfam PF01638 HxlR-like helix-turn-helix 16 103 8.2E-30 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type TMO_1162 3be85ed03311f34264a9e4b89c2fad7e 119 SUPERFAMILY SSF46785 4 104 4.89E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1162 3be85ed03311f34264a9e4b89c2fad7e 119 Gene3D G3DSA:1.10.10.10 2 115 6.9E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1318 4462e977ecb013af96dfbfe564be8c58 292 SUPERFAMILY SSF161098 53 277 8.24E-59 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1318 4462e977ecb013af96dfbfe564be8c58 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 288 4.7E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1318 4462e977ecb013af96dfbfe564be8c58 292 Gene3D G3DSA:1.10.3720.10 49 290 5.1E-68 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2342 dff804e044d26d3193f936aa48f9de21 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 2.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2342 dff804e044d26d3193f936aa48f9de21 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 2.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2342 dff804e044d26d3193f936aa48f9de21 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 2.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2342 dff804e044d26d3193f936aa48f9de21 448 SUPERFAMILY SSF47384 184 267 9.22E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_2342 dff804e044d26d3193f936aa48f9de21 448 SMART SM00388 199 268 4.9E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_2342 dff804e044d26d3193f936aa48f9de21 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 430 2.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2342 dff804e044d26d3193f936aa48f9de21 448 SUPERFAMILY SSF55874 257 430 1.83E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2342 dff804e044d26d3193f936aa48f9de21 448 Gene3D G3DSA:1.10.287.130 173 266 2.1E-27 T 14-10-2018 TMO_2342 dff804e044d26d3193f936aa48f9de21 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 200 267 6.6E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_2342 dff804e044d26d3193f936aa48f9de21 448 SUPERFAMILY SSF54631 72 185 3.54E-8 T 14-10-2018 TMO_2342 dff804e044d26d3193f936aa48f9de21 448 Gene3D G3DSA:3.10.580.10 58 172 7.5E-8 T 14-10-2018 TMO_2342 dff804e044d26d3193f936aa48f9de21 448 SMART SM00387 314 432 1.6E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2342 dff804e044d26d3193f936aa48f9de21 448 Gene3D G3DSA:3.30.565.10 269 433 6.8E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 Gene3D G3DSA:3.60.20.40 374 550 2.1E-50 T 14-10-2018 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 SUPERFAMILY SSF56235 24 550 4.24E-146 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 248 264 1.2E-54 T 14-10-2018 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 398 416 1.2E-54 T 14-10-2018 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 53 78 1.2E-54 T 14-10-2018 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 150 169 1.2E-54 T 14-10-2018 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 132 150 1.2E-54 T 14-10-2018 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 374 392 1.2E-54 T 14-10-2018 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 278 297 1.2E-54 T 14-10-2018 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 444 1.2E-54 T 14-10-2018 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 453 470 1.2E-54 T 14-10-2018 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 374 398 - T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 31 543 6.0E-120 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 Gene3D G3DSA:1.10.246.130 264 373 1.0E-32 T 14-10-2018 TMO_b0384 c4213433d5125590b0aab714bbbeef38 572 Pfam PF01019 Gamma-glutamyltranspeptidase 46 541 1.7E-125 T 14-10-2018 TMO_1806 ec410ae3e8dfd911874b7eb7a4119809 422 SMART SM00471 108 271 2.5E-7 T 14-10-2018 IPR003607 HD/PDEase domain TMO_1806 ec410ae3e8dfd911874b7eb7a4119809 422 TIGRFAM TIGR00277 HDIG: HDIG domain 111 182 1.8E-7 T 14-10-2018 IPR006675 HDIG domain TMO_1806 ec410ae3e8dfd911874b7eb7a4119809 422 Pfam PF01966 HD domain 112 195 2.2E-12 T 14-10-2018 IPR006674 HD domain TMO_1806 ec410ae3e8dfd911874b7eb7a4119809 422 SUPERFAMILY SSF109604 70 308 2.98E-31 T 14-10-2018 TMO_1806 ec410ae3e8dfd911874b7eb7a4119809 422 Gene3D G3DSA:1.10.3210.10 66 319 1.6E-37 T 14-10-2018 TMO_c0841 6463fe126cb7ecbb15f3bcc64c4444ca 175 SUPERFAMILY SSF55729 10 143 4.49E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_c0841 6463fe126cb7ecbb15f3bcc64c4444ca 175 Gene3D G3DSA:3.40.630.30 8 160 3.1E-23 T 14-10-2018 TMO_c0841 6463fe126cb7ecbb15f3bcc64c4444ca 175 Pfam PF13673 Acetyltransferase (GNAT) domain 50 144 4.5E-11 T 14-10-2018 IPR000182 GNAT domain TMO_0008 202a5362ac92740dd69910f409236594 725 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 130 646 1.9E-174 T 14-10-2018 TMO_0008 202a5362ac92740dd69910f409236594 725 Gene3D G3DSA:1.10.3810.10 111 306 1.6E-69 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_0008 202a5362ac92740dd69910f409236594 725 Pfam PF00905 Penicillin binding protein transpeptidase domain 379 612 2.9E-32 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TMO_0008 202a5362ac92740dd69910f409236594 725 SUPERFAMILY SSF56601 273 652 1.69E-111 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_0008 202a5362ac92740dd69910f409236594 725 Pfam PF00912 Transglycosylase 126 291 1.4E-62 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_0008 202a5362ac92740dd69910f409236594 725 Gene3D G3DSA:3.40.710.10 313 664 7.0E-107 T 14-10-2018 TMO_0008 202a5362ac92740dd69910f409236594 725 SUPERFAMILY SSF53955 110 310 7.31E-71 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_b0508 f209e4c2add9afc4278381741e18c515 297 SUPERFAMILY SSF46785 4 114 2.86E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0508 f209e4c2add9afc4278381741e18c515 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0508 f209e4c2add9afc4278381741e18c515 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0508 f209e4c2add9afc4278381741e18c515 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0508 f209e4c2add9afc4278381741e18c515 297 Pfam PF03466 LysR substrate binding domain 90 295 4.2E-36 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0508 f209e4c2add9afc4278381741e18c515 297 SUPERFAMILY SSF53850 91 296 9.41E-40 T 14-10-2018 TMO_b0508 f209e4c2add9afc4278381741e18c515 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.8E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0508 f209e4c2add9afc4278381741e18c515 297 Gene3D G3DSA:1.10.10.10 5 93 1.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0508 f209e4c2add9afc4278381741e18c515 297 Gene3D G3DSA:3.40.190.290 94 296 2.6E-49 T 14-10-2018 TMO_1337 437c51f95c4cbb1ec33e0553af8ff311 146 SUPERFAMILY SSF81330 13 134 1.02E-34 T 14-10-2018 IPR036019 Gated mechanosensitive channel TMO_1337 437c51f95c4cbb1ec33e0553af8ff311 146 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 100 109 5.6E-8 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TMO_1337 437c51f95c4cbb1ec33e0553af8ff311 146 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 5.6E-8 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TMO_1337 437c51f95c4cbb1ec33e0553af8ff311 146 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 91 99 5.6E-8 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TMO_1337 437c51f95c4cbb1ec33e0553af8ff311 146 Gene3D G3DSA:1.10.1200.120 3 141 4.2E-39 T 14-10-2018 IPR036019 Gated mechanosensitive channel TMO_1337 437c51f95c4cbb1ec33e0553af8ff311 146 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 139 22.554 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TMO_1337 437c51f95c4cbb1ec33e0553af8ff311 146 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 137 1.1E-40 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L TMO_1337 437c51f95c4cbb1ec33e0553af8ff311 146 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 138 2.5E-35 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TMO_b0550 cde9ceb2958ed6d8bc558210eefb1403 207 Pfam PF00857 Isochorismatase family 13 195 1.6E-36 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 TMO_b0550 cde9ceb2958ed6d8bc558210eefb1403 207 SUPERFAMILY SSF52499 8 191 3.14E-43 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_b0550 cde9ceb2958ed6d8bc558210eefb1403 207 Gene3D G3DSA:3.40.50.850 6 206 9.8E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TMO_3146 98a59c076a5144873d4a4c4e5ce07212 471 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 440 9.4E-149 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_3146 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 87 109 2.5E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_3146 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 302 320 2.5E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_3146 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 178 196 2.5E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_3146 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 206 225 2.5E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_3146 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 409 429 2.5E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_3146 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 348 370 2.5E-60 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_3146 98a59c076a5144873d4a4c4e5ce07212 471 Pfam PF01235 Sodium:alanine symporter family 52 451 1.8E-154 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_3146 98a59c076a5144873d4a4c4e5ce07212 471 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_0662 4bdb5740ca32bb8a7ebf1c30a0924a75 359 Gene3D G3DSA:3.30.1370.60 61 278 3.0E-106 T 14-10-2018 TMO_0662 4bdb5740ca32bb8a7ebf1c30a0924a75 359 Gene3D G3DSA:1.20.5.460 279 307 3.0E-106 T 14-10-2018 TMO_0662 4bdb5740ca32bb8a7ebf1c30a0924a75 359 Pfam PF02615 Malate/L-lactate dehydrogenase 5 336 1.1E-106 T 14-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 TMO_0662 4bdb5740ca32bb8a7ebf1c30a0924a75 359 Gene3D G3DSA:1.10.1530.10 9 340 3.0E-106 T 14-10-2018 TMO_0662 4bdb5740ca32bb8a7ebf1c30a0924a75 359 SUPERFAMILY SSF89733 2 340 2.75E-95 T 14-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 TMO_c0710 db30a4c6aade194867c6686c65db81ca 158 Pfam PF11066 Protein of unknown function (DUF2867) 4 146 3.6E-34 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 TMO_0959 06d6f294ac6af93ed8a32ffab4e3e4e9 455 Pfam PF02308 MgtC family 15 139 1.0E-14 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_0959 06d6f294ac6af93ed8a32ffab4e3e4e9 455 Pfam PF13194 Domain of unknown function (DUF4010) 187 428 1.0E-44 T 14-10-2018 IPR025105 Domain of unknown function DUF4010 TMO_c0445 befaf5e465e9632c652639ca06986435 466 ProSitePatterns PS00571 Amidases signature. 154 185 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TMO_c0445 befaf5e465e9632c652639ca06986435 466 Pfam PF01425 Amidase 26 447 6.9E-75 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_c0445 befaf5e465e9632c652639ca06986435 466 SUPERFAMILY SSF75304 3 453 1.44E-106 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_c0445 befaf5e465e9632c652639ca06986435 466 Gene3D G3DSA:3.90.1300.10 2 460 5.6E-104 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_c0516 490348530313499ad8988b8c814c7bba 109 SUPERFAMILY SSF143430 8 90 7.72E-18 T 14-10-2018 TMO_c0516 490348530313499ad8988b8c814c7bba 109 Pfam PF09827 CRISPR associated protein Cas2 9 88 2.0E-19 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 TMO_c0516 490348530313499ad8988b8c814c7bba 109 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 9 107 13.996 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 TMO_c0516 490348530313499ad8988b8c814c7bba 109 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 9 99 9.4E-23 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 TMO_d0044 3bda3ab15e6909d4847095e7303e4013 207 Gene3D G3DSA:1.10.3720.10 1 206 3.1E-53 T 14-10-2018 IPR035906 MetI-like superfamily TMO_d0044 3bda3ab15e6909d4847095e7303e4013 207 SUPERFAMILY SSF161098 2 197 3.27E-45 T 14-10-2018 IPR035906 MetI-like superfamily TMO_d0044 3bda3ab15e6909d4847095e7303e4013 207 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 1 98 8.0E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TMO_d0044 3bda3ab15e6909d4847095e7303e4013 207 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 23 203 3.0E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0024 0afc73f4a79cb49290ce4beb7d14f798 133 Gene3D G3DSA:3.30.70.1430 36 129 7.5E-29 T 14-10-2018 TMO_c0024 0afc73f4a79cb49290ce4beb7d14f798 133 Pfam PF00873 AcrB/AcrD/AcrF family 4 119 4.1E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TMO_c0024 0afc73f4a79cb49290ce4beb7d14f798 133 SUPERFAMILY SSF82693 37 117 2.62E-23 T 14-10-2018 TMO_1719 442be6bf3659db199b23efb605e7457b 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_1719 442be6bf3659db199b23efb605e7457b 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 230 6.4E-46 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_1719 442be6bf3659db199b23efb605e7457b 267 Gene3D G3DSA:3.90.226.10 1 239 1.2E-68 T 14-10-2018 TMO_1719 442be6bf3659db199b23efb605e7457b 267 SUPERFAMILY SSF52096 3 240 1.91E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0013 e2790aabd7b4c0160d7367b9c80d37c0 263 Pfam PF13180 PDZ domain 82 140 2.3E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_a0013 e2790aabd7b4c0160d7367b9c80d37c0 263 SUPERFAMILY SSF50156 60 150 7.24E-8 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 TMO_a0013 e2790aabd7b4c0160d7367b9c80d37c0 263 Gene3D G3DSA:2.30.42.10 83 156 3.1E-8 T 14-10-2018 TMO_2585 a23d0e8828f3f6ad1324d31843f20227 394 SUPERFAMILY SSF103473 6 393 8.11E-55 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2585 a23d0e8828f3f6ad1324d31843f20227 394 Gene3D G3DSA:1.20.1720.10 13 391 2.9E-86 T 14-10-2018 TMO_2585 a23d0e8828f3f6ad1324d31843f20227 394 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 21 387 1.6E-68 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 TMO_2585 a23d0e8828f3f6ad1324d31843f20227 394 Pfam PF07690 Major Facilitator Superfamily 24 358 3.7E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_a0340 48be88044e42fb5fa6269fed0480687f 418 Pfam PF00171 Aldehyde dehydrogenase family 2 410 4.0E-140 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_a0340 48be88044e42fb5fa6269fed0480687f 418 Gene3D G3DSA:3.40.309.10 194 383 4.7E-144 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_a0340 48be88044e42fb5fa6269fed0480687f 418 Gene3D G3DSA:3.40.605.10 2 405 4.7E-144 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_a0340 48be88044e42fb5fa6269fed0480687f 418 SUPERFAMILY SSF53720 2 415 4.58E-137 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_b0110 332073fda2fd9b9b8b26f3590469ecc5 349 Gene3D G3DSA:3.40.190.170 33 347 1.7E-80 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_b0110 332073fda2fd9b9b8b26f3590469ecc5 349 SUPERFAMILY SSF53850 38 282 1.88E-6 T 14-10-2018 TMO_b0110 332073fda2fd9b9b8b26f3590469ecc5 349 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 48 317 1.3E-29 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_3495 4e9d32350022c6ad4aed778d02f26a1b 451 SUPERFAMILY SSF58104 77 322 4.58E-49 T 14-10-2018 TMO_3495 4e9d32350022c6ad4aed778d02f26a1b 451 Gene3D G3DSA:1.20.120.30 334 430 1.1E-5 T 14-10-2018 TMO_3495 4e9d32350022c6ad4aed778d02f26a1b 451 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 196 225 1.5E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_3495 4e9d32350022c6ad4aed778d02f26a1b 451 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 83 112 1.5E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_3495 4e9d32350022c6ad4aed778d02f26a1b 451 SMART SM00283 69 330 7.1E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_3495 4e9d32350022c6ad4aed778d02f26a1b 451 Gene3D G3DSA:1.10.287.950 47 328 1.2E-46 T 14-10-2018 TMO_3495 4e9d32350022c6ad4aed778d02f26a1b 451 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 151 294 3.5E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_3495 4e9d32350022c6ad4aed778d02f26a1b 451 Pfam PF13682 Chemoreceptor zinc-binding domain 343 408 3.7E-13 T 14-10-2018 IPR025991 Chemoreceptor zinc-binding domain TMO_b0365 b8b22a122d13d6545569d03497e9d10c 390 Gene3D G3DSA:3.40.190.170 36 362 3.7E-57 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_b0365 b8b22a122d13d6545569d03497e9d10c 390 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 44 330 1.0E-15 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_1483 8b4c854ce89548e1db59c46f6fb227e5 260 Pfam PF01925 Sulfite exporter TauE/SafE 10 248 1.3E-49 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_b0548 24bb1dcc3a2a39630f9d33a59620110f 412 SUPERFAMILY SSF89796 8 411 1.31E-142 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_b0548 24bb1dcc3a2a39630f9d33a59620110f 412 Pfam PF02515 CoA-transferase family III 10 387 2.8E-135 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_b0548 24bb1dcc3a2a39630f9d33a59620110f 412 Gene3D G3DSA:3.30.1540.10 247 338 3.7E-142 T 14-10-2018 TMO_b0548 24bb1dcc3a2a39630f9d33a59620110f 412 Gene3D G3DSA:3.40.50.10540 10 405 3.7E-142 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_2470 a6906a13b414fa74c966810deca48d1d 183 Gene3D G3DSA:2.60.120.1140 43 176 3.0E-40 T 14-10-2018 IPR038695 Saro_0823-like superfamily TMO_2470 a6906a13b414fa74c966810deca48d1d 183 Pfam PF02643 Uncharacterized ACR, COG1430 74 176 2.6E-31 T 14-10-2018 IPR003795 Protein of unknown function DUF192 TMO_2144 19254def0dc0d8957b5df0bc327f12b8 188 Gene3D G3DSA:3.40.50.300 1 184 5.9E-37 T 14-10-2018 TMO_2144 19254def0dc0d8957b5df0bc327f12b8 188 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 142 1.6E-27 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 TMO_2144 19254def0dc0d8957b5df0bc327f12b8 188 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 122 4.0E-24 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 TMO_2144 19254def0dc0d8957b5df0bc327f12b8 188 SUPERFAMILY SSF52540 1 180 1.23E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2999 68767fae199845ed444eb0a139fc2ccc 425 Gene3D G3DSA:2.40.420.20 345 406 1.4E-56 T 14-10-2018 TMO_2999 68767fae199845ed444eb0a139fc2ccc 425 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 91 326 2.8E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_2999 68767fae199845ed444eb0a139fc2ccc 425 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 84 407 3.9E-44 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_2999 68767fae199845ed444eb0a139fc2ccc 425 Gene3D G3DSA:2.40.30.170 84 344 1.4E-56 T 14-10-2018 TMO_2999 68767fae199845ed444eb0a139fc2ccc 425 Gene3D G3DSA:1.10.287.470 128 233 1.4E-56 T 14-10-2018 TMO_2999 68767fae199845ed444eb0a139fc2ccc 425 SUPERFAMILY SSF111369 85 342 4.05E-16 T 14-10-2018 TMO_2999 68767fae199845ed444eb0a139fc2ccc 425 Gene3D G3DSA:2.40.50.100 94 268 1.4E-56 T 14-10-2018 TMO_c0320 4e05ef9099f76b5b24bc83496a84583e 247 SUPERFAMILY SSF102215 16 228 3.01E-50 T 14-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TMO_c0320 4e05ef9099f76b5b24bc83496a84583e 247 Pfam PF02633 Creatinine amidohydrolase 18 228 3.6E-51 T 14-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TMO_c0320 4e05ef9099f76b5b24bc83496a84583e 247 Gene3D G3DSA:3.40.50.10310 12 238 5.6E-54 T 14-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TMO_b0435 11e158ac12db4332ad67202e05cb0fc6 261 Gene3D G3DSA:3.30.70.2650 77 165 4.1E-6 T 14-10-2018 TMO_b0435 11e158ac12db4332ad67202e05cb0fc6 261 Pfam PF07848 PaaX-like protein 9 52 1.2E-5 T 14-10-2018 IPR012906 PaaX-like, N-terminal TMO_b0435 11e158ac12db4332ad67202e05cb0fc6 261 Gene3D G3DSA:1.10.10.10 1 76 3.0E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1922 0a74415c5ec650b4edf20f4c61f6a321 590 Gene3D G3DSA:3.55.50.30 85 160 1.9E-7 T 14-10-2018 TMO_1922 0a74415c5ec650b4edf20f4c61f6a321 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 345 369 3.3E-12 T 14-10-2018 IPR001775 GspD/PilQ family TMO_1922 0a74415c5ec650b4edf20f4c61f6a321 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 283 293 3.3E-12 T 14-10-2018 IPR001775 GspD/PilQ family TMO_1922 0a74415c5ec650b4edf20f4c61f6a321 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 519 533 3.3E-12 T 14-10-2018 IPR001775 GspD/PilQ family TMO_1922 0a74415c5ec650b4edf20f4c61f6a321 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 496 514 3.3E-12 T 14-10-2018 IPR001775 GspD/PilQ family TMO_1922 0a74415c5ec650b4edf20f4c61f6a321 590 Pfam PF00263 Bacterial type II and III secretion system protein 353 531 1.3E-32 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 TMO_0435 66a40e2dbf90b684d76a4919e9ca783e 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 305 2.9E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0435 66a40e2dbf90b684d76a4919e9ca783e 326 Gene3D G3DSA:1.10.3720.10 38 312 7.0E-46 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0435 66a40e2dbf90b684d76a4919e9ca783e 326 SUPERFAMILY SSF161098 42 303 1.14E-43 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1545 3e0c4dc779b572328fbb445e2461a587 297 Pfam PF05673 Protein of unknown function (DUF815) 37 287 1.1E-100 T 14-10-2018 IPR008533 Domain of unknown function DUF815 TMO_1545 3e0c4dc779b572328fbb445e2461a587 297 Gene3D G3DSA:3.40.50.300 67 208 1.4E-6 T 14-10-2018 TMO_1545 3e0c4dc779b572328fbb445e2461a587 297 SUPERFAMILY SSF52540 48 201 3.9E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0045 7ed6cc041b0293a9712236fd2370a195 58 Gene3D G3DSA:2.30.110.10 1 56 8.9E-10 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_0525 7cd0fd507298c4611a03b40bb7ce07cc 388 SMART SM00833 249 364 1.5E-49 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_0525 7cd0fd507298c4611a03b40bb7ce07cc 388 Gene3D G3DSA:3.40.50.300 1 222 7.2E-68 T 14-10-2018 TMO_0525 7cd0fd507298c4611a03b40bb7ce07cc 388 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 1 202 6.4E-55 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_0525 7cd0fd507298c4611a03b40bb7ce07cc 388 SUPERFAMILY SSF52540 1 300 2.34E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0525 7cd0fd507298c4611a03b40bb7ce07cc 388 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 249 364 4.1E-29 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_0651 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.30.365.10 154 371 1.4E-62 T 14-10-2018 TMO_0651 2b248607fe16a540710af2dea7b21d0a 773 SUPERFAMILY SSF54665 5 162 1.44E-42 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily TMO_0651 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.30.365.10 197 294 1.4E-62 T 14-10-2018 TMO_0651 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.30.365.10 380 742 6.8E-122 T 14-10-2018 TMO_0651 2b248607fe16a540710af2dea7b21d0a 773 SUPERFAMILY SSF56003 132 765 1.83E-191 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TMO_0651 2b248607fe16a540710af2dea7b21d0a 773 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 20 140 3.8E-28 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_0651 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.30.365.10 467 615 6.8E-122 T 14-10-2018 TMO_0651 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.90.1170.50 1 140 1.5E-43 T 14-10-2018 TMO_0651 2b248607fe16a540710af2dea7b21d0a 773 SMART SM01008 20 140 1.5E-46 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_0651 2b248607fe16a540710af2dea7b21d0a 773 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 156 700 9.0E-166 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_1154 d8bebe3ab76d48ce60a1c9d44bfaf5c9 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.5E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1154 d8bebe3ab76d48ce60a1c9d44bfaf5c9 307 Gene3D G3DSA:3.40.190.10 95 291 3.5E-47 T 14-10-2018 TMO_1154 d8bebe3ab76d48ce60a1c9d44bfaf5c9 307 SUPERFAMILY SSF46785 3 115 1.06E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1154 d8bebe3ab76d48ce60a1c9d44bfaf5c9 307 Gene3D G3DSA:1.10.10.10 2 87 1.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1154 d8bebe3ab76d48ce60a1c9d44bfaf5c9 307 SUPERFAMILY SSF53850 93 300 1.21E-41 T 14-10-2018 TMO_1154 d8bebe3ab76d48ce60a1c9d44bfaf5c9 307 Pfam PF03466 LysR substrate binding domain 92 297 1.6E-43 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_1154 d8bebe3ab76d48ce60a1c9d44bfaf5c9 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1154 d8bebe3ab76d48ce60a1c9d44bfaf5c9 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1154 d8bebe3ab76d48ce60a1c9d44bfaf5c9 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_1154 d8bebe3ab76d48ce60a1c9d44bfaf5c9 307 Gene3D G3DSA:3.40.190.10 166 271 3.5E-47 T 14-10-2018 TMO_0323 cd4d1e615ce6b622b11654303266adb8 301 SMART SM00382 37 220 3.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0323 cd4d1e615ce6b622b11654303266adb8 301 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_0323 cd4d1e615ce6b622b11654303266adb8 301 Pfam PF00005 ABC transporter 29 170 5.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0323 cd4d1e615ce6b622b11654303266adb8 301 Gene3D G3DSA:3.40.50.300 6 241 9.2E-63 T 14-10-2018 TMO_0323 cd4d1e615ce6b622b11654303266adb8 301 SUPERFAMILY SSF52540 8 226 1.03E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0323 cd4d1e615ce6b622b11654303266adb8 301 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 29 258 2.2E-93 T 14-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 TMO_1184 e1e2cd7530a07d0e30edecf713abd5fb 309 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 223 287 6.1E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_1184 e1e2cd7530a07d0e30edecf713abd5fb 309 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 221 305 1.3E-22 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_1184 e1e2cd7530a07d0e30edecf713abd5fb 309 SUPERFAMILY SSF52540 28 295 1.74E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1184 e1e2cd7530a07d0e30edecf713abd5fb 309 Gene3D G3DSA:3.40.50.300 2 309 2.8E-84 T 14-10-2018 TMO_1184 e1e2cd7530a07d0e30edecf713abd5fb 309 Pfam PF00005 ABC transporter 21 171 7.1E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1184 e1e2cd7530a07d0e30edecf713abd5fb 309 SMART SM00382 28 221 9.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0617 43a6ead73927811a25326b950add9e4a 75 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 1 38 2.5E-6 T 14-10-2018 IPR015032 MTH538 TIR-like domain TMO_c0617 43a6ead73927811a25326b950add9e4a 75 Gene3D G3DSA:3.40.50.9200 1 56 4.5E-8 T 14-10-2018 IPR036490 Hypothetical protein MTH538 superfamily TMO_c0617 43a6ead73927811a25326b950add9e4a 75 SUPERFAMILY SSF52206 1 53 3.92E-16 T 14-10-2018 IPR036490 Hypothetical protein MTH538 superfamily TMO_1047 95278576fffee1df5c2e74bf9c08128f 171 SUPERFAMILY SSF50475 17 169 6.38E-50 T 14-10-2018 TMO_1047 95278576fffee1df5c2e74bf9c08128f 171 Gene3D G3DSA:2.30.110.10 2 170 9.5E-52 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_1047 95278576fffee1df5c2e74bf9c08128f 171 Pfam PF01613 Flavin reductase like domain 26 169 3.2E-36 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_1047 95278576fffee1df5c2e74bf9c08128f 171 SMART SM00903 25 168 1.1E-59 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_0406 2786474d4dfdeb002e8177cbc10e31c2 300 Gene3D G3DSA:3.40.800.20 1 298 1.7E-64 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0406 2786474d4dfdeb002e8177cbc10e31c2 300 SUPERFAMILY SSF52768 3 286 1.29E-77 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily TMO_0406 2786474d4dfdeb002e8177cbc10e31c2 300 Pfam PF00850 Histone deacetylase domain 23 277 9.3E-47 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0406 2786474d4dfdeb002e8177cbc10e31c2 300 PRINTS PR01270 Histone deacetylase superfamily signature 112 135 3.2E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0406 2786474d4dfdeb002e8177cbc10e31c2 300 PRINTS PR01270 Histone deacetylase superfamily signature 146 161 3.2E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0406 2786474d4dfdeb002e8177cbc10e31c2 300 PRINTS PR01270 Histone deacetylase superfamily signature 220 230 3.2E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_1239 79bb68971926f09f3d1f7d18833dd0e2 440 Pfam PF00448 SRP54-type protein, GTPase domain 229 421 1.5E-23 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TMO_1239 79bb68971926f09f3d1f7d18833dd0e2 440 SUPERFAMILY SSF52540 224 390 1.31E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1239 79bb68971926f09f3d1f7d18833dd0e2 440 Gene3D G3DSA:3.40.50.300 223 422 3.9E-36 T 14-10-2018 TMO_1239 79bb68971926f09f3d1f7d18833dd0e2 440 SMART SM00962 228 422 9.3E-15 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TMO_b0453 8932ea3c0b6ae43f1a842f6d608c2a05 241 Pfam PF02613 Nitrate reductase delta subunit 35 160 5.1E-13 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone TMO_b0453 8932ea3c0b6ae43f1a842f6d608c2a05 241 Gene3D G3DSA:1.10.4070.10 70 151 4.1E-14 T 14-10-2018 TMO_b0453 8932ea3c0b6ae43f1a842f6d608c2a05 241 SUPERFAMILY SSF89155 2 164 7.72E-33 T 14-10-2018 IPR036411 TorD-like superfamily TMO_b0453 8932ea3c0b6ae43f1a842f6d608c2a05 241 Gene3D G3DSA:1.20.120.700 5 161 4.1E-14 T 14-10-2018 TMO_b0453 8932ea3c0b6ae43f1a842f6d608c2a05 241 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 162 1.9E-33 T 14-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 TMO_3436 3969f006c2e305abfb58ad7fe3c3aa09 318 Gene3D G3DSA:3.40.50.720 126 250 2.4E-17 T 14-10-2018 TMO_3436 3969f006c2e305abfb58ad7fe3c3aa09 318 SUPERFAMILY SSF50129 3 147 5.07E-8 T 14-10-2018 IPR011032 GroES-like superfamily TMO_3436 3969f006c2e305abfb58ad7fe3c3aa09 318 SUPERFAMILY SSF51735 113 253 1.02E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3436 3969f006c2e305abfb58ad7fe3c3aa09 318 Gene3D G3DSA:3.90.180.10 95 275 2.4E-17 T 14-10-2018 TMO_a0223 3d71762fa16bdcba0a293344953f7871 358 PIRSF PIRSF039026 14 357 5.8E-97 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like TMO_a0223 3d71762fa16bdcba0a293344953f7871 358 Gene3D G3DSA:3.40.190.10 167 336 4.4E-84 T 14-10-2018 TMO_a0223 3d71762fa16bdcba0a293344953f7871 358 Gene3D G3DSA:3.40.190.170 47 349 4.4E-84 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_a0223 3d71762fa16bdcba0a293344953f7871 358 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 54 331 1.3E-42 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_1936 769fccba86490e19ab91a01bb3fe363d 123 SUPERFAMILY SSF55729 7 101 1.06E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_1936 769fccba86490e19ab91a01bb3fe363d 123 Gene3D G3DSA:3.40.630.30 3 108 2.6E-13 T 14-10-2018 TMO_2589 6edcf749f397972a6e1bff673650cc47 159 Pfam PF10722 Putative bacterial sensory transduction regulator 42 155 5.6E-20 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN TMO_0140 181ec6f1dc31c83344115a7fd24c525c 366 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 360 4.0E-91 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 TMO_0140 181ec6f1dc31c83344115a7fd24c525c 366 Gene3D G3DSA:3.40.640.10 41 265 8.2E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0140 181ec6f1dc31c83344115a7fd24c525c 366 SUPERFAMILY SSF53383 6 361 2.02E-80 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_0140 181ec6f1dc31c83344115a7fd24c525c 366 Gene3D G3DSA:3.90.1150.10 24 351 8.2E-104 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_0140 181ec6f1dc31c83344115a7fd24c525c 366 Pfam PF00155 Aminotransferase class I and II 30 347 4.5E-52 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_0140 181ec6f1dc31c83344115a7fd24c525c 366 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 361 54.405 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 TMO_c0915 535d2688b7cba6ce5b1f4f1d7235aa86 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 423 1.1E-120 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_c0915 535d2688b7cba6ce5b1f4f1d7235aa86 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 417 6.9E-109 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_c0915 535d2688b7cba6ce5b1f4f1d7235aa86 428 PIRSF PIRSF006066 2 428 5.0E-132 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_a0246 20ff3b5ca9151a0cc01a1af6932963a0 337 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 308 5.5E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0502 be2b5c807392908260eab37aaaaf1678 276 Pfam PF11299 Protein of unknown function (DUF3100) 22 260 5.9E-98 T 14-10-2018 IPR021450 Protein of unknown function DUF3100 TMO_2714 493a9a884447c64027b17607fdb7b7ee 165 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 13 132 13.709 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TMO_2714 493a9a884447c64027b17607fdb7b7ee 165 Pfam PF00825 Ribonuclease P 18 129 2.9E-21 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TMO_2714 493a9a884447c64027b17607fdb7b7ee 165 Gene3D G3DSA:3.30.230.10 15 133 1.0E-22 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_2714 493a9a884447c64027b17607fdb7b7ee 165 SUPERFAMILY SSF54211 18 131 3.79E-20 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_2714 493a9a884447c64027b17607fdb7b7ee 165 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 20 107 7.0E-6 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TMO_2714 493a9a884447c64027b17607fdb7b7ee 165 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 19 129 6.5E-13 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TMO_3027 31f304147ad0136760a98e2c694dc507 545 SUPERFAMILY SSF55785 397 520 3.32E-8 T 14-10-2018 IPR035965 PAS domain superfamily TMO_3027 31f304147ad0136760a98e2c694dc507 545 Pfam PF08447 PAS fold 463 524 5.2E-6 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 TMO_3027 31f304147ad0136760a98e2c694dc507 545 Gene3D G3DSA:3.30.450.20 405 526 1.3E-13 T 14-10-2018 TMO_2410 b836a2bbe3d0c4076af85ffa060aa3dd 484 Pfam PF02867 Ribonucleotide reductase, barrel domain 302 448 3.1E-36 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_2410 b836a2bbe3d0c4076af85ffa060aa3dd 484 PRINTS PR01183 Ribonucleotide reductase large chain signature 238 260 5.4E-15 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_2410 b836a2bbe3d0c4076af85ffa060aa3dd 484 PRINTS PR01183 Ribonucleotide reductase large chain signature 48 67 5.4E-15 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_2410 b836a2bbe3d0c4076af85ffa060aa3dd 484 PRINTS PR01183 Ribonucleotide reductase large chain signature 301 328 5.4E-15 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_2410 b836a2bbe3d0c4076af85ffa060aa3dd 484 SUPERFAMILY SSF51998 8 453 2.75E-123 T 14-10-2018 TMO_2410 b836a2bbe3d0c4076af85ffa060aa3dd 484 Gene3D G3DSA:3.20.70.20 2 458 1.7E-136 T 14-10-2018 TMO_2410 b836a2bbe3d0c4076af85ffa060aa3dd 484 Pfam PF02867 Ribonucleotide reductase, barrel domain 9 294 2.5E-63 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TMO_c0706 9af68d1a97729f4b2f5832df8b1a2ff8 413 SUPERFAMILY SSF56235 19 330 6.95E-55 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_c0706 9af68d1a97729f4b2f5832df8b1a2ff8 413 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 127 146 2.8E-17 T 14-10-2018 TMO_c0706 9af68d1a97729f4b2f5832df8b1a2ff8 413 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 48 73 2.8E-17 T 14-10-2018 TMO_c0706 9af68d1a97729f4b2f5832df8b1a2ff8 413 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 109 127 2.8E-17 T 14-10-2018 TMO_c0706 9af68d1a97729f4b2f5832df8b1a2ff8 413 Pfam PF01019 Gamma-glutamyltranspeptidase 41 264 8.3E-45 T 14-10-2018 TMO_a0306 b3258938fe26b63b90ee27ed40943703 158 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TMO_a0306 b3258938fe26b63b90ee27ed40943703 158 Gene3D G3DSA:3.10.20.30 1 73 9.8E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_a0306 b3258938fe26b63b90ee27ed40943703 158 SUPERFAMILY SSF47741 87 156 5.63E-32 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily TMO_a0306 b3258938fe26b63b90ee27ed40943703 158 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 55 2.0E-6 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_a0306 b3258938fe26b63b90ee27ed40943703 158 SUPERFAMILY SSF54292 2 77 5.51E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_a0306 b3258938fe26b63b90ee27ed40943703 158 Pfam PF01799 [2Fe-2S] binding domain 73 148 1.5E-29 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_a0306 b3258938fe26b63b90ee27ed40943703 158 Gene3D G3DSA:1.10.150.120 74 158 1.4E-30 T 14-10-2018 TMO_1657 e15573472d91e0e189315714fef312de 293 Pfam PF00231 ATP synthase 5 286 9.1E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1657 e15573472d91e0e189315714fef312de 293 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 1.4E-9 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1657 e15573472d91e0e189315714fef312de 293 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.4E-9 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1657 e15573472d91e0e189315714fef312de 293 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.4E-9 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1657 e15573472d91e0e189315714fef312de 293 Gene3D G3DSA:1.10.287.80 8 283 3.4E-38 T 14-10-2018 TMO_1657 e15573472d91e0e189315714fef312de 293 SUPERFAMILY SSF52943 4 286 3.66E-39 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_1657 e15573472d91e0e189315714fef312de 293 Gene3D G3DSA:3.40.1380.10 62 206 3.4E-38 T 14-10-2018 TMO_1785 41332874b9116afbc435f54f539dfc31 94 Pfam PF03795 YCII-related domain 12 78 1.7E-5 T 14-10-2018 IPR005545 YCII-related TMO_1785 41332874b9116afbc435f54f539dfc31 94 SUPERFAMILY SSF54909 1 77 5.09E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_2689 2addc502c50c9009d4d0b36da6eb5bf7 133 Pfam PF12681 Glyoxalase-like domain 8 130 3.8E-12 T 14-10-2018 IPR025870 Glyoxalase-like domain TMO_2689 2addc502c50c9009d4d0b36da6eb5bf7 133 SUPERFAMILY SSF54593 3 131 2.69E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_2689 2addc502c50c9009d4d0b36da6eb5bf7 133 Gene3D G3DSA:3.10.180.10 5 132 2.1E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_1013 bdf24eda7b3f1a027fdc1e44287447b6 370 Gene3D G3DSA:1.10.730.10 160 254 1.7E-6 T 14-10-2018 TMO_1013 bdf24eda7b3f1a027fdc1e44287447b6 370 Pfam PF09334 tRNA synthetases class I (M) 161 224 5.3E-5 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1013 bdf24eda7b3f1a027fdc1e44287447b6 370 SUPERFAMILY SSF52374 153 216 6.68E-6 T 14-10-2018 TMO_1211 3e1c6155f881a62a71393cd0b5dd2ab2 392 Pfam PF00144 Beta-lactamase 14 386 7.3E-63 T 14-10-2018 IPR001466 Beta-lactamase-related TMO_1211 3e1c6155f881a62a71393cd0b5dd2ab2 392 SUPERFAMILY SSF56601 6 380 3.86E-81 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_1211 3e1c6155f881a62a71393cd0b5dd2ab2 392 Gene3D G3DSA:3.40.710.10 1 391 2.0E-105 T 14-10-2018 TMO_3392 74c7fe40e19b0aa3b684c250c091e67c 244 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 188 197 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 TMO_3392 74c7fe40e19b0aa3b684c250c091e67c 244 SUPERFAMILY SSF48264 41 228 2.49E-41 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_3392 74c7fe40e19b0aa3b684c250c091e67c 244 PRINTS PR00359 B-class P450 signature 186 195 1.6E-20 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_3392 74c7fe40e19b0aa3b684c250c091e67c 244 PRINTS PR00359 B-class P450 signature 137 164 1.6E-20 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_3392 74c7fe40e19b0aa3b684c250c091e67c 244 PRINTS PR00359 B-class P450 signature 120 131 1.6E-20 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_3392 74c7fe40e19b0aa3b684c250c091e67c 244 PRINTS PR00359 B-class P450 signature 165 180 1.6E-20 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_3392 74c7fe40e19b0aa3b684c250c091e67c 244 PRINTS PR00359 B-class P450 signature 195 206 1.6E-20 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_3392 74c7fe40e19b0aa3b684c250c091e67c 244 Gene3D G3DSA:1.10.630.10 1 244 2.5E-53 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_3392 74c7fe40e19b0aa3b684c250c091e67c 244 Pfam PF00067 Cytochrome P450 118 215 8.0E-16 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_0325 75a3a27efc446835c8bf293fa03cd2ae 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 5.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0325 75a3a27efc446835c8bf293fa03cd2ae 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 9.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0325 75a3a27efc446835c8bf293fa03cd2ae 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 9.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0325 75a3a27efc446835c8bf293fa03cd2ae 215 SUPERFAMILY SSF46689 7 74 4.57E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0325 75a3a27efc446835c8bf293fa03cd2ae 215 Gene3D G3DSA:1.10.357.10 4 205 3.2E-23 T 14-10-2018 TMO_a0240 27b39464cc912527261c932276ef2285 100 Gene3D G3DSA:3.30.2310.20 1 90 7.3E-26 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_a0240 27b39464cc912527261c932276ef2285 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 89 2.8E-16 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_0730 5a00584686eed8c83a8c0917f6f45ed8 148 Gene3D G3DSA:3.30.310.50 43 147 2.7E-31 T 14-10-2018 TMO_0730 5a00584686eed8c83a8c0917f6f45ed8 148 PIRSF PIRSF028291 32 147 2.8E-23 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 TMO_0730 5a00584686eed8c83a8c0917f6f45ed8 148 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 47 144 1.7E-31 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 TMO_0652 628ba2d43ac81ae6fee9075fa2f579ae 399 TIGRFAM TIGR00937 2A51: chromate efflux transporter 16 392 2.0E-83 T 14-10-2018 IPR014047 Chromate transporter, long chain TMO_0652 628ba2d43ac81ae6fee9075fa2f579ae 399 Pfam PF02417 Chromate transporter 228 392 1.6E-27 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TMO_0652 628ba2d43ac81ae6fee9075fa2f579ae 399 Pfam PF02417 Chromate transporter 11 174 4.8E-29 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TMO_0652 628ba2d43ac81ae6fee9075fa2f579ae 399 PIRSF PIRSF004810 2 399 8.2E-106 T 14-10-2018 IPR014047 Chromate transporter, long chain TMO_0909 7356f3f6b96fb2e664f85548c6b9f388 331 Gene3D G3DSA:1.25.40.10 205 326 7.7E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_0909 7356f3f6b96fb2e664f85548c6b9f388 331 SUPERFAMILY SSF48452 208 316 9.49E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_0909 7356f3f6b96fb2e664f85548c6b9f388 331 Pfam PF13174 Tetratricopeptide repeat 284 312 0.018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_0909 7356f3f6b96fb2e664f85548c6b9f388 331 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 214 316 1.4E-30 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal TMO_0909 7356f3f6b96fb2e664f85548c6b9f388 331 Pfam PF13432 Tetratricopeptide repeat 214 266 1.1E-5 T 14-10-2018 TMO_0909 7356f3f6b96fb2e664f85548c6b9f388 331 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 14 326 16.527 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 TMO_c0096 57be083dfb201f0bd2b803be66ac31c7 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 12 62 3.2E-25 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA TMO_3243 a0cc12cc30e7fe912f038afabe99f5ff 1031 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 8 1025 7.1E-288 T 14-10-2018 IPR014153 Double-strand break repair protein AddB TMO_3243 a0cc12cc30e7fe912f038afabe99f5ff 1031 Pfam PF12705 PD-(D/E)XK nuclease superfamily 755 966 1.5E-23 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TMO_3243 a0cc12cc30e7fe912f038afabe99f5ff 1031 SUPERFAMILY SSF52540 333 705 6.27E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3205 21dbf26bcc1d127a29b752eba34bfabd 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 90 4.9E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3205 21dbf26bcc1d127a29b752eba34bfabd 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 137 150 4.9E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3205 21dbf26bcc1d127a29b752eba34bfabd 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 4.9E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3205 21dbf26bcc1d127a29b752eba34bfabd 280 Gene3D G3DSA:3.40.50.1820 17 274 1.1E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3205 21dbf26bcc1d127a29b752eba34bfabd 280 Pfam PF00561 alpha/beta hydrolase fold 49 159 2.3E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_3205 21dbf26bcc1d127a29b752eba34bfabd 280 SUPERFAMILY SSF53474 19 272 5.27E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1393 80777168022f870b10e0abbcd28e97e3 391 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 22 50 1.1E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_1393 80777168022f870b10e0abbcd28e97e3 391 Pfam PF13416 Bacterial extracellular solute-binding protein 67 350 1.4E-29 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_1393 80777168022f870b10e0abbcd28e97e3 391 SUPERFAMILY SSF53850 52 388 1.88E-61 T 14-10-2018 TMO_1393 80777168022f870b10e0abbcd28e97e3 391 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 194 1.6E-16 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_1393 80777168022f870b10e0abbcd28e97e3 391 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 58 74 1.6E-16 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_1393 80777168022f870b10e0abbcd28e97e3 391 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 102 116 1.6E-16 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_1393 80777168022f870b10e0abbcd28e97e3 391 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 74 95 1.6E-16 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_1393 80777168022f870b10e0abbcd28e97e3 391 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 291 310 1.6E-16 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_1393 80777168022f870b10e0abbcd28e97e3 391 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 153 169 1.6E-16 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_1393 80777168022f870b10e0abbcd28e97e3 391 Gene3D G3DSA:3.40.190.10 162 298 1.6E-65 T 14-10-2018 TMO_1393 80777168022f870b10e0abbcd28e97e3 391 Gene3D G3DSA:3.40.190.10 57 353 1.6E-65 T 14-10-2018 TMO_c0359 65dca739eaec726f540b86f31298eda5 211 Gene3D G3DSA:3.20.19.10 1 174 4.5E-57 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 TMO_c0359 65dca739eaec726f540b86f31298eda5 211 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 3 186 1.1E-51 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 TMO_c0359 65dca739eaec726f540b86f31298eda5 211 Pfam PF00694 Aconitase C-terminal domain 10 124 1.9E-20 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 TMO_c0359 65dca739eaec726f540b86f31298eda5 211 SUPERFAMILY SSF52016 5 191 4.32E-43 T 14-10-2018 TMO_1459 1a3eee38f3cb2d8066286e3826fc902a 407 Pfam PF06792 Uncharacterised protein family (UPF0261) 9 404 3.9E-153 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 TMO_1459 1a3eee38f3cb2d8066286e3826fc902a 407 PIRSF PIRSF033271 7 407 1.1E-165 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 TMO_1459 1a3eee38f3cb2d8066286e3826fc902a 407 Gene3D G3DSA:3.40.50.12030 188 406 1.2E-86 T 14-10-2018 TMO_1459 1a3eee38f3cb2d8066286e3826fc902a 407 Gene3D G3DSA:3.40.50.12020 1 180 6.7E-53 T 14-10-2018 TMO_3484 3b94e4c1fd15cd16a3fd32b353853e4b 52 SUPERFAMILY SSF47413 2 38 5.63E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_b0022 2db1dd5aa956b14ff3c84d1815269218 256 SUPERFAMILY SSF161098 59 241 1.57E-23 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0022 2db1dd5aa956b14ff3c84d1815269218 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 251 9.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0022 2db1dd5aa956b14ff3c84d1815269218 256 Gene3D G3DSA:1.10.3720.10 53 253 1.2E-16 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0796 412b34e27ae0f61992f2ab6a635a65a7 163 Pfam PF01694 Rhomboid family 24 157 1.7E-28 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TMO_0796 412b34e27ae0f61992f2ab6a635a65a7 163 SUPERFAMILY SSF144091 21 162 8.76E-30 T 14-10-2018 TMO_0796 412b34e27ae0f61992f2ab6a635a65a7 163 Gene3D G3DSA:1.20.1540.10 21 158 1.3E-22 T 14-10-2018 IPR035952 Rhomboid-like superfamily TMO_1164 48547fde9aca8b7940cf5640f0d68b4b 408 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 83 283 4.6E-27 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_1164 48547fde9aca8b7940cf5640f0d68b4b 408 SUPERFAMILY SSF111369 78 289 1.96E-28 T 14-10-2018 TMO_1164 48547fde9aca8b7940cf5640f0d68b4b 408 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 363 1.0E-48 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TMO_1164 48547fde9aca8b7940cf5640f0d68b4b 408 Gene3D G3DSA:2.40.30.170 78 295 2.2E-54 T 14-10-2018 TMO_1164 48547fde9aca8b7940cf5640f0d68b4b 408 Gene3D G3DSA:2.40.50.100 86 214 2.2E-54 T 14-10-2018 TMO_1164 48547fde9aca8b7940cf5640f0d68b4b 408 Gene3D G3DSA:2.40.420.20 296 363 2.2E-54 T 14-10-2018 TMO_1164 48547fde9aca8b7940cf5640f0d68b4b 408 Gene3D G3DSA:1.10.287.470 121 180 2.2E-54 T 14-10-2018 TMO_2197 a3d744019698acebec88d73b462d8136 666 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 112 553 4.5E-102 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 TMO_2197 a3d744019698acebec88d73b462d8136 666 Gene3D G3DSA:3.40.50.300 321 553 1.1E-49 T 14-10-2018 TMO_2197 a3d744019698acebec88d73b462d8136 666 SUPERFAMILY SSF52540 107 550 2.3E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2191 5ccc936c1c3c2d3a0c7ef72638589668 254 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 10 251 7.1E-57 T 14-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ TMO_2067 4521dc37b8c3dc6d5c20417911172a42 139 Pfam PF11911 Protein of unknown function (DUF3429) 1 130 6.1E-33 T 14-10-2018 IPR021836 Protein of unknown function DUF3429 TMO_a0529 f7643f5e5d1aace35a288e938b8d3586 97 SUPERFAMILY SSF51735 1 97 3.0E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0529 f7643f5e5d1aace35a288e938b8d3586 97 Gene3D G3DSA:3.40.50.720 1 97 6.4E-18 T 14-10-2018 TMO_a0351 3616e5e08ed79a74b01f5df41602c431 301 Pfam PF00872 Transposase, Mutator family 7 265 1.2E-87 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TMO_a0559 61379dc56a61692defcc7df9605196d5 306 Pfam PF03466 LysR substrate binding domain 87 295 3.1E-29 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_a0559 61379dc56a61692defcc7df9605196d5 306 Gene3D G3DSA:3.40.190.290 91 295 7.0E-31 T 14-10-2018 TMO_a0559 61379dc56a61692defcc7df9605196d5 306 SUPERFAMILY SSF53850 89 298 3.98E-31 T 14-10-2018 TMO_a0559 61379dc56a61692defcc7df9605196d5 306 Gene3D G3DSA:1.10.10.10 1 90 2.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0559 61379dc56a61692defcc7df9605196d5 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.4E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0559 61379dc56a61692defcc7df9605196d5 306 SUPERFAMILY SSF46785 1 110 3.63E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0585 bbbebb763438693935476ece88703373 164 SUPERFAMILY SSF52540 5 130 4.36E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0585 bbbebb763438693935476ece88703373 164 Gene3D G3DSA:3.40.50.300 2 162 1.6E-23 T 14-10-2018 TMO_a0585 bbbebb763438693935476ece88703373 164 Pfam PF13671 AAA domain 7 149 8.5E-27 T 14-10-2018 TMO_3188 4bf9cf50815752a270535527b6520838 622 SUPERFAMILY SSF53850 70 612 8.69E-119 T 14-10-2018 TMO_3188 4bf9cf50815752a270535527b6520838 622 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 123 526 1.0E-72 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_3188 4bf9cf50815752a270535527b6520838 622 PIRSF PIRSF002741 27 615 1.3E-96 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_3188 4bf9cf50815752a270535527b6520838 622 Gene3D G3DSA:3.10.105.10 331 590 1.4E-246 T 14-10-2018 TMO_3188 4bf9cf50815752a270535527b6520838 622 Gene3D G3DSA:3.40.190.10 48 610 1.4E-246 T 14-10-2018 TMO_a0484 d407c8cf7c10d52e6f7de150fbfae5c8 416 Pfam PF07690 Major Facilitator Superfamily 21 382 9.7E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_a0484 d407c8cf7c10d52e6f7de150fbfae5c8 416 SUPERFAMILY SSF103473 10 415 7.46E-19 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_a0484 d407c8cf7c10d52e6f7de150fbfae5c8 416 Gene3D G3DSA:1.20.1250.20 9 414 9.2E-20 T 14-10-2018 TMO_c0089 8b0062d57d880f5c10b24c4fcce1b214 175 Pfam PF11358 Protein of unknown function (DUF3158) 11 165 9.1E-75 T 14-10-2018 IPR021502 Protein of unknown function DUF3158 TMO_c0728 212e7d294b27369add98a73d937a01ec 320 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 146.193 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TMO_c0728 212e7d294b27369add98a73d937a01ec 320 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 120 1.5E-38 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TMO_c0728 212e7d294b27369add98a73d937a01ec 320 SUPERFAMILY SSF52440 3 122 9.78E-38 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TMO_c0728 212e7d294b27369add98a73d937a01ec 320 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.2E-68 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TMO_c0728 212e7d294b27369add98a73d937a01ec 320 SUPERFAMILY SSF56059 124 311 3.7E-54 T 14-10-2018 TMO_c0728 212e7d294b27369add98a73d937a01ec 320 Gene3D G3DSA:3.30.1490.20 137 201 2.1E-106 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TMO_c0728 212e7d294b27369add98a73d937a01ec 320 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 310 2.4E-119 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TMO_c0728 212e7d294b27369add98a73d937a01ec 320 Gene3D G3DSA:3.40.50.20 9 114 2.1E-106 T 14-10-2018 TMO_c0728 212e7d294b27369add98a73d937a01ec 320 Gene3D G3DSA:3.30.470.20 115 294 2.1E-106 T 14-10-2018 TMO_0532 38ba6b0713ca4d5442c77e146f1a2488 303 Gene3D G3DSA:3.90.226.10 15 297 9.9E-64 T 14-10-2018 TMO_0532 38ba6b0713ca4d5442c77e146f1a2488 303 SUPERFAMILY SSF52096 15 276 3.11E-58 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_0532 38ba6b0713ca4d5442c77e146f1a2488 303 Pfam PF00378 Enoyl-CoA hydratase/isomerase 37 267 4.1E-39 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_0532 38ba6b0713ca4d5442c77e146f1a2488 303 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 125 145 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_a0393 952351a7a4504d7d91d55f20118f6747 134 SUPERFAMILY SSF54593 1 131 7.52E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_a0393 952351a7a4504d7d91d55f20118f6747 134 Gene3D G3DSA:3.10.180.10 2 134 7.5E-43 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_a0393 952351a7a4504d7d91d55f20118f6747 134 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 131 1.8E-50 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 TMO_a0393 952351a7a4504d7d91d55f20118f6747 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 130 2.3E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_a0342 0f44acb25dbd5ae0a4a3aafc84fadf1e 274 Gene3D G3DSA:1.10.3720.10 58 272 1.1E-21 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0342 0f44acb25dbd5ae0a4a3aafc84fadf1e 274 SUPERFAMILY SSF161098 65 252 6.15E-25 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0342 0f44acb25dbd5ae0a4a3aafc84fadf1e 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 271 1.1E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_a0120 bd738c2a01460375db99cd586a15ac02 489 SUPERFAMILY SSF81345 12 318 7.45E-52 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_a0120 bd738c2a01460375db99cd586a15ac02 489 Gene3D G3DSA:1.10.3470.10 339 434 2.5E-16 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_a0120 bd738c2a01460375db99cd586a15ac02 489 Pfam PF01032 FecCD transport family 353 425 2.6E-14 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_a0120 bd738c2a01460375db99cd586a15ac02 489 Pfam PF01032 FecCD transport family 18 316 1.1E-57 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_a0120 bd738c2a01460375db99cd586a15ac02 489 Gene3D G3DSA:1.10.3470.10 4 320 6.2E-62 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_a0120 bd738c2a01460375db99cd586a15ac02 489 SUPERFAMILY SSF81345 337 428 5.23E-16 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_b0135 419b6a49fdef387a1f91ac935a790c83 275 Pfam PF01435 Peptidase family M48 123 238 1.5E-7 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_c0475 5ae5a3d80018e7401ef1dafe47c91451 126 SUPERFAMILY SSF46785 4 112 7.72E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0475 5ae5a3d80018e7401ef1dafe47c91451 126 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 111 5.9E-28 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type TMO_c0475 5ae5a3d80018e7401ef1dafe47c91451 126 Gene3D G3DSA:1.10.10.10 2 126 4.2E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0475 5ae5a3d80018e7401ef1dafe47c91451 126 Pfam PF02082 Transcriptional regulator 4 58 3.1E-17 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type TMO_0612 e2726dd5ded75fa749cee28bd6b54a64 194 SUPERFAMILY SSF52833 32 192 1.1E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_0612 e2726dd5ded75fa749cee28bd6b54a64 194 Gene3D G3DSA:3.40.30.10 36 193 2.3E-27 T 14-10-2018 TMO_0612 e2726dd5ded75fa749cee28bd6b54a64 194 Pfam PF08534 Redoxin 34 188 1.7E-21 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 TMO_1968 54e9a9dbcea08e3960d77cc206f6ef60 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 97 4.1E-25 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like TMO_1968 54e9a9dbcea08e3960d77cc206f6ef60 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 3 102 20.427 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 TMO_3268 733e40d585da652a8ccdeda46d906725 260 Pfam PF08892 YqcI/YcgG family 38 249 3.9E-68 T 14-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG TMO_c0140 f1402f6f1fd41f78ed1b5ab85be5e870 160 SUPERFAMILY SSF46785 19 149 2.1E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0140 f1402f6f1fd41f78ed1b5ab85be5e870 160 Gene3D G3DSA:1.10.10.10 13 150 7.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0140 f1402f6f1fd41f78ed1b5ab85be5e870 160 Pfam PF12802 MarR family 43 102 8.9E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0140 f1402f6f1fd41f78ed1b5ab85be5e870 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 1.5E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0140 f1402f6f1fd41f78ed1b5ab85be5e870 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 1.5E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0140 f1402f6f1fd41f78ed1b5ab85be5e870 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 78 1.5E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0140 f1402f6f1fd41f78ed1b5ab85be5e870 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 77 111 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_c0140 f1402f6f1fd41f78ed1b5ab85be5e870 160 SMART SM00347 38 138 2.7E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0192 0cb74c843ea9a34537d91865254c4b09 272 Gene3D G3DSA:3.40.50.1820 20 266 1.2E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0192 0cb74c843ea9a34537d91865254c4b09 272 SUPERFAMILY SSF53474 8 252 9.57E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0192 0cb74c843ea9a34537d91865254c4b09 272 Pfam PF12697 Alpha/beta hydrolase family 45 236 1.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0848 ef361e6463c632af44703ae025da6cdb 421 Pfam PF07690 Major Facilitator Superfamily 25 328 3.0E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0848 ef361e6463c632af44703ae025da6cdb 421 SUPERFAMILY SSF103473 9 412 7.46E-53 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0848 ef361e6463c632af44703ae025da6cdb 421 Gene3D G3DSA:1.20.1250.20 224 413 1.5E-17 T 14-10-2018 TMO_0848 ef361e6463c632af44703ae025da6cdb 421 Gene3D G3DSA:1.20.1250.20 15 206 1.0E-22 T 14-10-2018 TMO_0848 ef361e6463c632af44703ae025da6cdb 421 ProSitePatterns PS00216 Sugar transport proteins signature 1. 209 225 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TMO_b0520 3b3bed101ad2e7f36611cd7c4dd3c999 166 SUPERFAMILY SSF53850 5 164 1.45E-19 T 14-10-2018 TMO_b0520 3b3bed101ad2e7f36611cd7c4dd3c999 166 Gene3D G3DSA:3.40.190.290 2 162 1.2E-18 T 14-10-2018 TMO_b0520 3b3bed101ad2e7f36611cd7c4dd3c999 166 Pfam PF03466 LysR substrate binding domain 11 164 1.6E-18 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_d0003 34ce2aadfe1bcb67c2b3d573f83349ef 167 SUPERFAMILY SSF54593 3 157 6.06E-45 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_d0003 34ce2aadfe1bcb67c2b3d573f83349ef 167 PIRSF PIRSF021700 1 159 1.9E-58 T 14-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase TMO_d0003 34ce2aadfe1bcb67c2b3d573f83349ef 167 Gene3D G3DSA:3.10.180.70 1 161 2.4E-55 T 14-10-2018 TMO_d0003 34ce2aadfe1bcb67c2b3d573f83349ef 167 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 119 1.6E-42 T 14-10-2018 IPR028973 PhnB-like TMO_2265 54d5be76a14627dde3aea3ff9ad18be0 512 Pfam PF03929 PepSY-associated TM region 9 366 4.1E-63 T 14-10-2018 IPR005625 PepSY-associated TM protein TMO_3080 99d33b482588b62f53ca42b3954eb928 87 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 11 54 3.1E-11 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 TMO_3080 99d33b482588b62f53ca42b3954eb928 87 Pfam PF04995 Heme exporter protein D (CcmD) 14 55 2.8E-12 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 TMO_b0462 6ad388e65549019bad53fe7923e14abf 171 SMART SM00267 1 171 1.3E-47 T 14-10-2018 IPR000160 GGDEF domain TMO_b0462 6ad388e65549019bad53fe7923e14abf 171 Gene3D G3DSA:3.30.70.270 1 171 1.7E-51 T 14-10-2018 TMO_b0462 6ad388e65549019bad53fe7923e14abf 171 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 4 170 5.1E-44 T 14-10-2018 IPR000160 GGDEF domain TMO_b0462 6ad388e65549019bad53fe7923e14abf 171 SUPERFAMILY SSF55073 13 170 2.28E-42 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_b0462 6ad388e65549019bad53fe7923e14abf 171 Pfam PF00990 Diguanylate cyclase, GGDEF domain 8 167 1.2E-38 T 14-10-2018 IPR000160 GGDEF domain TMO_c0194 f20a5d1a12916e35a3e3c6a30bfa6b3a 360 Gene3D G3DSA:3.40.190.10 162 352 1.1E-24 T 14-10-2018 TMO_c0194 f20a5d1a12916e35a3e3c6a30bfa6b3a 360 SUPERFAMILY SSF53850 41 268 2.31E-31 T 14-10-2018 TMO_c0194 f20a5d1a12916e35a3e3c6a30bfa6b3a 360 Gene3D G3DSA:3.40.190.10 37 149 4.4E-13 T 14-10-2018 TMO_c0194 f20a5d1a12916e35a3e3c6a30bfa6b3a 360 Pfam PF09084 NMT1/THI5 like 56 264 3.3E-19 T 14-10-2018 IPR015168 SsuA/THI5-like TMO_1966 218e15a681c88e6d69fe8349ff7a9164 507 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 52 128 1.2E-5 T 14-10-2018 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1966 218e15a681c88e6d69fe8349ff7a9164 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 7.6E-51 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1966 218e15a681c88e6d69fe8349ff7a9164 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 7.6E-51 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1966 218e15a681c88e6d69fe8349ff7a9164 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 7.6E-51 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1966 218e15a681c88e6d69fe8349ff7a9164 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 7.6E-51 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1966 218e15a681c88e6d69fe8349ff7a9164 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 7.6E-51 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1966 218e15a681c88e6d69fe8349ff7a9164 507 Pfam PF00361 Proton-conducting membrane transporter 134 420 5.4E-89 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_1966 218e15a681c88e6d69fe8349ff7a9164 507 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 489 2.6E-199 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 3.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 3.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 3.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 SUPERFAMILY SSF51735 2 252 2.11E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 9.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 9.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 9.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 Pfam PF00106 short chain dehydrogenase 5 192 7.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 201 3.7E-7 T 14-10-2018 TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_0696 c5a5ecafc0e231005aa3dfea062ddd3e 301 Gene3D G3DSA:3.40.50.720 1 288 2.0E-73 T 14-10-2018 TMO_c0640 3e52a9fbac65417d49121741d6f4d497 557 SUPERFAMILY SSF52317 256 327 6.87E-6 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_3217 8539a39eef6484b6b151655875190142 152 Gene3D G3DSA:2.60.40.790 32 137 1.2E-19 T 14-10-2018 IPR008978 HSP20-like chaperone TMO_3217 8539a39eef6484b6b151655875190142 152 SUPERFAMILY SSF49764 30 135 3.84E-18 T 14-10-2018 IPR008978 HSP20-like chaperone TMO_3217 8539a39eef6484b6b151655875190142 152 Pfam PF00011 Hsp20/alpha crystallin family 43 135 4.7E-16 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain TMO_3550 961c171f35f4b4050a207e1844b17116 199 Pfam PF06347 Bacterial SH3 domain 143 191 2.2E-9 T 14-10-2018 IPR010466 Protein of unknown function DUF1058 TMO_3550 961c171f35f4b4050a207e1844b17116 199 Pfam PF06347 Bacterial SH3 domain 75 130 1.0E-18 T 14-10-2018 IPR010466 Protein of unknown function DUF1058 TMO_3550 961c171f35f4b4050a207e1844b17116 199 Gene3D G3DSA:2.30.30.40 74 129 1.8E-9 T 14-10-2018 TMO_a0314 bbe93bba0229d611ed987b7374987eec 214 Gene3D G3DSA:3.40.50.360 11 202 1.9E-16 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_a0314 bbe93bba0229d611ed987b7374987eec 214 Pfam PF03358 NADPH-dependent FMN reductase 11 159 2.4E-19 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TMO_a0314 bbe93bba0229d611ed987b7374987eec 214 SUPERFAMILY SSF52218 9 200 4.35E-24 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_c0218 8417d5ed0111870fa301a98db5320ff7 187 Pfam PF12679 ABC-2 family transporter protein 1 177 2.0E-23 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 TMO_1579 e97744e535c5d5ac88bf9bdc4d546d8d 263 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 8.3E-31 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TMO_1579 e97744e535c5d5ac88bf9bdc4d546d8d 263 SUPERFAMILY SSF51658 1 256 1.7E-73 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily TMO_1579 e97744e535c5d5ac88bf9bdc4d546d8d 263 Gene3D G3DSA:3.20.20.150 1 258 2.3E-69 T 14-10-2018 TMO_1579 e97744e535c5d5ac88bf9bdc4d546d8d 263 PIRSF PIRSF006241 1 260 5.1E-88 T 14-10-2018 IPR026040 Hydroxypyruvate isomerase-like TMO_2351 59495f985af4610e1a2f7c432f3cd270 327 TIGRFAM TIGR03945 PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA 8 310 1.2E-108 T 14-10-2018 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA TMO_2351 59495f985af4610e1a2f7c432f3cd270 327 Gene3D G3DSA:3.40.50.1100 16 301 2.4E-78 T 14-10-2018 TMO_2351 59495f985af4610e1a2f7c432f3cd270 327 SUPERFAMILY SSF53686 21 311 6.55E-67 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_2351 59495f985af4610e1a2f7c432f3cd270 327 Gene3D G3DSA:3.40.50.1100 43 148 2.4E-78 T 14-10-2018 TMO_2351 59495f985af4610e1a2f7c432f3cd270 327 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 294 2.1E-49 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_a0561 c7b19385daf957eddc8ebfa3f043d92f 696 Pfam PF05226 CHASE2 domain 41 571 6.1E-8 T 14-10-2018 IPR007890 CHASE2 TMO_a0044 e7ade45e1bcee508087200d5f2482815 313 Pfam PF13759 Putative 2OG-Fe(II) oxygenase 199 300 1.3E-13 T 14-10-2018 IPR012668 Conserved hypothetical protein CHP02466 TMO_a0044 e7ade45e1bcee508087200d5f2482815 313 Gene3D G3DSA:2.60.120.620 131 310 1.3E-13 T 14-10-2018 TMO_1738 38a72b10d1ae0c8538b5662b89fb60bc 454 Pfam PF01943 Polysaccharide biosynthesis protein 30 294 1.2E-12 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 TMO_3259 1b6b5c48b6d44dee026cb9486887c921 186 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 159 3.2E-15 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_d0055 49e7afbe6bdf280553cdda4e6fc9cb69 171 Pfam PF08281 Sigma-70, region 4 111 161 3.7E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_d0055 49e7afbe6bdf280553cdda4e6fc9cb69 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 165 6.9E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_d0055 49e7afbe6bdf280553cdda4e6fc9cb69 171 Gene3D G3DSA:1.10.1740.10 2 76 2.8E-11 T 14-10-2018 TMO_d0055 49e7afbe6bdf280553cdda4e6fc9cb69 171 SUPERFAMILY SSF88659 101 165 3.71E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_d0055 49e7afbe6bdf280553cdda4e6fc9cb69 171 Pfam PF04542 Sigma-70 region 2 13 73 1.6E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_d0055 49e7afbe6bdf280553cdda4e6fc9cb69 171 Gene3D G3DSA:1.10.10.10 82 169 1.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_d0055 49e7afbe6bdf280553cdda4e6fc9cb69 171 SUPERFAMILY SSF88946 5 86 2.83E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_1155 1585a75ff60fa655bf0f41e338ec9e2a 387 SUPERFAMILY SSF51197 86 266 3.16E-27 T 14-10-2018 TMO_1155 1585a75ff60fa655bf0f41e338ec9e2a 387 Gene3D G3DSA:2.60.120.650 19 226 3.8E-38 T 14-10-2018 TMO_1155 1585a75ff60fa655bf0f41e338ec9e2a 387 Pfam PF08007 Cupin superfamily protein 114 244 9.1E-21 T 14-10-2018 IPR003347 JmjC domain TMO_b0600 8e0d448b175cfc69d98d5f1d0e677e93 189 Gene3D G3DSA:2.60.40.1880 53 189 3.6E-26 T 14-10-2018 IPR038696 Invasion protein B superfamily TMO_b0600 8e0d448b175cfc69d98d5f1d0e677e93 189 Pfam PF06776 Invasion associated locus B (IalB) protein 57 188 1.9E-28 T 14-10-2018 IPR010642 Invasion protein B TMO_3108 9387d5e7ccc2cad8e60605816177ce59 230 SUPERFAMILY SSF52833 3 80 1.82E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_3108 9387d5e7ccc2cad8e60605816177ce59 230 SUPERFAMILY SSF47616 81 205 1.74E-13 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TMO_3108 9387d5e7ccc2cad8e60605816177ce59 230 Gene3D G3DSA:3.40.30.10 7 196 9.4E-47 T 14-10-2018 TMO_3108 9387d5e7ccc2cad8e60605816177ce59 230 Gene3D G3DSA:1.20.1050.10 83 192 9.4E-47 T 14-10-2018 TMO_3108 9387d5e7ccc2cad8e60605816177ce59 230 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 80 6.4E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_c0396 c7f271251ca8e092b37abda8d42c69df 326 SUPERFAMILY SSF51412 8 304 1.08E-60 T 14-10-2018 TMO_c0396 c7f271251ca8e092b37abda8d42c69df 326 Gene3D G3DSA:3.20.20.70 8 321 4.6E-61 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_c0396 c7f271251ca8e092b37abda8d42c69df 326 Pfam PF03060 Nitronate monooxygenase 81 305 6.1E-21 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_c0275 b3b23f63e051c485ff946ac2d54c4458 125 Gene3D G3DSA:3.10.450.50 1 122 4.8E-26 T 14-10-2018 TMO_c0275 b3b23f63e051c485ff946ac2d54c4458 125 SUPERFAMILY SSF54427 5 121 3.79E-35 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_c0275 b3b23f63e051c485ff946ac2d54c4458 125 Pfam PF12893 Putative lumazine-binding 6 119 8.2E-34 T 14-10-2018 IPR039437 Putative lumazine-binding TMO_2346 f77600623d0c8829ab3d4c36a2b54192 518 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 143 159 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 TMO_2346 f77600623d0c8829ab3d4c36a2b54192 518 Pfam PF00221 Aromatic amino acid lyase 17 475 3.3E-179 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 TMO_2346 f77600623d0c8829ab3d4c36a2b54192 518 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 7 509 43.043 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2346 f77600623d0c8829ab3d4c36a2b54192 518 SUPERFAMILY SSF48557 3 504 8.63E-183 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 TMO_2346 f77600623d0c8829ab3d4c36a2b54192 518 Gene3D G3DSA:1.20.200.10 202 512 2.3E-115 T 14-10-2018 TMO_2346 f77600623d0c8829ab3d4c36a2b54192 518 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 9 509 2.5E-202 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TMO_2346 f77600623d0c8829ab3d4c36a2b54192 518 Gene3D G3DSA:1.10.275.10 7 201 2.7E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal TMO_1708 ed5de002754fe9f8ca7fefa03f00983e 173 SUPERFAMILY SSF101307 13 161 4.84E-34 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 TMO_1708 ed5de002754fe9f8ca7fefa03f00983e 173 PIRSF PIRSF006162 7 169 4.6E-44 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TMO_1708 ed5de002754fe9f8ca7fefa03f00983e 173 Pfam PF04608 Phosphatidylglycerophosphatase A 17 162 1.2E-42 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 TMO_b0469 962e9dac4a24e21cf57b3560970b86e3 435 Pfam PF01266 FAD dependent oxidoreductase 11 406 1.6E-45 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_b0469 962e9dac4a24e21cf57b3560970b86e3 435 SUPERFAMILY SSF51905 10 429 1.22E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0469 962e9dac4a24e21cf57b3560970b86e3 435 Gene3D G3DSA:3.50.50.60 7 70 1.8E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0469 962e9dac4a24e21cf57b3560970b86e3 435 Gene3D G3DSA:3.50.50.60 117 408 8.1E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_b0469 962e9dac4a24e21cf57b3560970b86e3 435 SUPERFAMILY SSF54373 278 367 8.11E-9 T 14-10-2018 TMO_b0469 962e9dac4a24e21cf57b3560970b86e3 435 Gene3D G3DSA:3.30.9.10 143 366 8.1E-37 T 14-10-2018 TMO_b0509 b670daad0c9d7b0d47ed267727582f86 167 Gene3D G3DSA:1.10.10.10 1 165 6.7E-52 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0509 b670daad0c9d7b0d47ed267727582f86 167 SUPERFAMILY SSF46785 5 144 1.13E-41 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0509 b670daad0c9d7b0d47ed267727582f86 167 Pfam PF01638 HxlR-like helix-turn-helix 19 104 2.4E-20 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type TMO_2032 071caeeab30f36da32bf0a770280bb3a 379 Pfam PF00296 Luciferase-like monooxygenase 4 323 3.4E-45 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 TMO_2032 071caeeab30f36da32bf0a770280bb3a 379 Gene3D G3DSA:3.20.20.30 3 356 1.1E-76 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 TMO_2032 071caeeab30f36da32bf0a770280bb3a 379 SUPERFAMILY SSF51679 4 355 4.58E-75 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 TMO_0483 1908aa3452d022bd6d0addd12ff0e096 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 262 1.5E-56 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_0483 1908aa3452d022bd6d0addd12ff0e096 264 Gene3D G3DSA:1.10.12.10 207 264 1.2E-16 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_0483 1908aa3452d022bd6d0addd12ff0e096 264 SUPERFAMILY SSF52096 4 263 8.0E-80 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_0483 1908aa3452d022bd6d0addd12ff0e096 264 Gene3D G3DSA:3.90.226.10 2 206 4.8E-66 T 14-10-2018 TMO_a0148 e7573a60f8cf69b4c73572e7aee8cb7b 429 Pfam PF10134 Replication initiator protein A 26 261 1.8E-67 T 14-10-2018 IPR018777 Replication initiator protein A TMO_a0026 64524aa380eb8577395b51b0c92e95ae 75 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 2 75 4.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2690 54422377e8026d9728eb5b552646099a 379 Pfam PF13671 AAA domain 239 366 4.0E-16 T 14-10-2018 TMO_2690 54422377e8026d9728eb5b552646099a 379 Pfam PF01966 HD domain 56 147 1.1E-10 T 14-10-2018 IPR006674 HD domain TMO_2690 54422377e8026d9728eb5b552646099a 379 Gene3D G3DSA:3.40.50.300 235 378 3.3E-27 T 14-10-2018 TMO_2690 54422377e8026d9728eb5b552646099a 379 SUPERFAMILY SSF52540 240 371 8.44E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2690 54422377e8026d9728eb5b552646099a 379 SUPERFAMILY SSF109604 44 176 9.42E-18 T 14-10-2018 TMO_2690 54422377e8026d9728eb5b552646099a 379 TIGRFAM TIGR00277 HDIG: HDIG domain 49 117 2.1E-8 T 14-10-2018 IPR006675 HDIG domain TMO_2690 54422377e8026d9728eb5b552646099a 379 Gene3D G3DSA:1.10.3210.10 38 183 3.5E-11 T 14-10-2018 TMO_0190 aa76dae46f1318c3cad0f4f3d7bb3475 321 Gene3D G3DSA:3.40.50.720 23 318 2.2E-101 T 14-10-2018 TMO_0190 aa76dae46f1318c3cad0f4f3d7bb3475 321 SUPERFAMILY SSF51735 33 315 5.72E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1949 33049babd634932bc1241a0e87f8da35 209 SUPERFAMILY SSF51161 32 191 1.16E-41 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_1949 33049babd634932bc1241a0e87f8da35 209 Gene3D G3DSA:2.160.10.10 27 205 7.5E-54 T 14-10-2018 TMO_1949 33049babd634932bc1241a0e87f8da35 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 38 71 2.8E-5 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_1355 ebb77a2d0fd8113da9f4f86f1236f537 558 SUPERFAMILY SSF51445 41 305 1.19E-54 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_1355 ebb77a2d0fd8113da9f4f86f1236f537 558 Gene3D G3DSA:3.20.20.80 46 306 3.4E-18 T 14-10-2018 TMO_1355 ebb77a2d0fd8113da9f4f86f1236f537 558 ProSitePatterns PS00587 Glycosyl hydrolases family 17 signature. 226 239 - T 14-10-2018 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 TMO_1355 ebb77a2d0fd8113da9f4f86f1236f537 558 Pfam PF00332 Glycosyl hydrolases family 17 224 305 5.8E-8 T 14-10-2018 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 TMO_2810 7d1cda2968a571ccd9f3fde724d698c3 223 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 185 36.228 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2810 7d1cda2968a571ccd9f3fde724d698c3 223 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 37 179 3.5E-55 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2810 7d1cda2968a571ccd9f3fde724d698c3 223 Gene3D G3DSA:2.60.370.10 54 193 7.0E-55 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_2810 7d1cda2968a571ccd9f3fde724d698c3 223 SUPERFAMILY SSF110111 60 182 6.8E-50 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_0762 c0550f23e80cb8beeec2b80553b2edba 301 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 44 274 4.6E-28 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TMO_0762 c0550f23e80cb8beeec2b80553b2edba 301 PIRSF PIRSF038471 11 286 3.1E-51 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TMO_0762 c0550f23e80cb8beeec2b80553b2edba 301 Gene3D G3DSA:2.40.10.350 189 262 1.3E-27 T 14-10-2018 TMO_0762 c0550f23e80cb8beeec2b80553b2edba 301 Pfam PF04085 rod shape-determining protein MreC 135 274 7.7E-29 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TMO_0762 c0550f23e80cb8beeec2b80553b2edba 301 Gene3D G3DSA:2.40.10.340 130 272 1.3E-27 T 14-10-2018 TMO_c0861 2af29b4ad0cf881d66d6e2ecb5013ab7 643 Pfam PF00733 Asparagine synthase 240 617 8.3E-23 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_c0861 2af29b4ad0cf881d66d6e2ecb5013ab7 643 PIRSF PIRSF001589 60 318 5.2E-37 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_c0861 2af29b4ad0cf881d66d6e2ecb5013ab7 643 PIRSF PIRSF001589 481 632 1.2E-4 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TMO_c0861 2af29b4ad0cf881d66d6e2ecb5013ab7 643 Gene3D G3DSA:3.60.20.10 32 222 7.1E-25 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_c0861 2af29b4ad0cf881d66d6e2ecb5013ab7 643 SUPERFAMILY SSF52402 218 572 6.81E-29 T 14-10-2018 TMO_c0861 2af29b4ad0cf881d66d6e2ecb5013ab7 643 Pfam PF13522 Glutamine amidotransferase domain 36 159 3.3E-13 T 14-10-2018 TMO_c0861 2af29b4ad0cf881d66d6e2ecb5013ab7 643 SUPERFAMILY SSF56235 58 221 1.13E-26 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_c0861 2af29b4ad0cf881d66d6e2ecb5013ab7 643 Gene3D G3DSA:3.40.50.620 230 442 2.1E-15 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_c0861 2af29b4ad0cf881d66d6e2ecb5013ab7 643 Gene3D G3DSA:3.40.50.620 472 601 6.3E-9 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_2264 cceacb3dfa6c09b57d44ca5dab9091e1 116 Pfam PF11804 Protein of unknown function (DUF3325) 5 103 8.3E-21 T 14-10-2018 IPR021762 Protein of unknown function DUF3325 TMO_c0853 f8dca308583b79ed11245aa7098a7a7e 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 215 2.2E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0853 f8dca308583b79ed11245aa7098a7a7e 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 229 2.2E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0853 f8dca308583b79ed11245aa7098a7a7e 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 318 332 2.2E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0853 f8dca308583b79ed11245aa7098a7a7e 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 158 173 2.2E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0853 f8dca308583b79ed11245aa7098a7a7e 370 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 31 60 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TMO_c0853 f8dca308583b79ed11245aa7098a7a7e 370 Gene3D G3DSA:3.40.50.1820 104 369 6.1E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0853 f8dca308583b79ed11245aa7098a7a7e 370 Pfam PF00364 Biotin-requiring enzyme 9 70 1.0E-11 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_c0853 f8dca308583b79ed11245aa7098a7a7e 370 SUPERFAMILY SSF51230 7 96 2.49E-19 T 14-10-2018 IPR011053 Single hybrid motif TMO_c0853 f8dca308583b79ed11245aa7098a7a7e 370 Pfam PF12697 Alpha/beta hydrolase family 135 362 4.0E-26 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0853 f8dca308583b79ed11245aa7098a7a7e 370 Gene3D G3DSA:2.40.50.100 2 103 1.2E-20 T 14-10-2018 TMO_c0853 f8dca308583b79ed11245aa7098a7a7e 370 SUPERFAMILY SSF53474 111 368 7.7E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2130 f6c09a0cc479cbb34f3fa9b5e1985002 258 SUPERFAMILY SSF102198 2 256 5.36E-57 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TMO_2130 f6c09a0cc479cbb34f3fa9b5e1985002 258 Pfam PF04199 Putative cyclase 6 186 5.1E-36 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TMO_2130 f6c09a0cc479cbb34f3fa9b5e1985002 258 Gene3D G3DSA:3.50.30.50 4 258 3.4E-48 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TMO_3315 41ddb6bbcdd17f923d451885b027a55b 241 Pfam PF01914 MarC family integral membrane protein 114 232 3.9E-24 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 TMO_3315 41ddb6bbcdd17f923d451885b027a55b 241 Pfam PF01914 MarC family integral membrane protein 4 106 2.8E-24 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 TMO_2651 212fdc089c0792a58f58464874958964 518 Pfam PF13180 PDZ domain 300 391 1.8E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_2651 212fdc089c0792a58f58464874958964 518 Gene3D G3DSA:2.40.10.120 61 293 6.2E-87 T 14-10-2018 TMO_2651 212fdc089c0792a58f58464874958964 518 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 63 514 2.1E-149 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 TMO_2651 212fdc089c0792a58f58464874958964 518 SUPERFAMILY SSF50494 61 292 2.91E-68 T 14-10-2018 IPR009003 Peptidase S1, PA clan TMO_2651 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 136 148 6.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2651 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 198 222 6.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2651 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 254 271 6.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2651 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 157 177 6.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2651 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 340 352 6.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2651 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 232 249 6.7E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_2651 212fdc089c0792a58f58464874958964 518 Gene3D G3DSA:2.30.42.10 298 405 1.7E-30 T 14-10-2018 TMO_2651 212fdc089c0792a58f58464874958964 518 Gene3D G3DSA:2.30.42.10 413 518 8.7E-11 T 14-10-2018 TMO_2651 212fdc089c0792a58f58464874958964 518 SMART SM00228 300 382 2.6E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_2651 212fdc089c0792a58f58464874958964 518 SMART SM00228 416 508 1.0 T 14-10-2018 IPR001478 PDZ domain GO:0005515 TMO_2651 212fdc089c0792a58f58464874958964 518 Pfam PF13365 Trypsin-like peptidase domain 127 261 9.2E-36 T 14-10-2018 TMO_2651 212fdc089c0792a58f58464874958964 518 SUPERFAMILY SSF50156 417 516 4.86E-8 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 TMO_2651 212fdc089c0792a58f58464874958964 518 SUPERFAMILY SSF50156 258 383 1.01E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 TMO_c0903 1f11df7c9b699f664168c56359e27dff 521 Pfam PF13437 HlyD family secretion protein 382 481 6.3E-13 T 14-10-2018 TMO_c0903 1f11df7c9b699f664168c56359e27dff 521 Gene3D G3DSA:2.40.50.100 284 418 1.3E-26 T 14-10-2018 TMO_c0903 1f11df7c9b699f664168c56359e27dff 521 Gene3D G3DSA:2.40.30.170 280 486 1.3E-26 T 14-10-2018 TMO_c0903 1f11df7c9b699f664168c56359e27dff 521 SUPERFAMILY SSF111369 277 469 1.44E-14 T 14-10-2018 TMO_c0903 1f11df7c9b699f664168c56359e27dff 521 Pfam PF13533 Biotin-lipoyl like 286 332 9.2E-12 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TMO_c0903 1f11df7c9b699f664168c56359e27dff 521 Gene3D G3DSA:1.10.287.470 318 381 1.3E-26 T 14-10-2018 TMO_0623 07b568aa65bb3a1a9d5eda7a7c9aa15a 130 Pfam PF07027 Protein of unknown function (DUF1318) 39 129 7.6E-27 T 14-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 TMO_0623 07b568aa65bb3a1a9d5eda7a7c9aa15a 130 PIRSF PIRSF025560 9 129 6.9E-24 T 14-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 TMO_1684 c9c9da0758401e83e8d620029ec0fb2d 395 SUPERFAMILY SSF103473 11 387 7.59E-56 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_1684 c9c9da0758401e83e8d620029ec0fb2d 395 Gene3D G3DSA:1.20.1720.10 15 389 4.1E-80 T 14-10-2018 TMO_1684 c9c9da0758401e83e8d620029ec0fb2d 395 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TMO_1684 c9c9da0758401e83e8d620029ec0fb2d 395 Pfam PF07690 Major Facilitator Superfamily 28 357 1.1E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0111 450b74c2b80fd2fb76fd794daca32d2e 228 Pfam PF07298 NnrU protein 7 226 1.5E-54 T 14-10-2018 IPR009915 NnrU domain TMO_c0294 acb3cd15cc6b8d30af8ab34657983682 166 SUPERFAMILY SSF118196 22 149 4.58E-39 T 14-10-2018 IPR036413 YaeB-like superfamily TMO_c0294 acb3cd15cc6b8d30af8ab34657983682 166 Pfam PF01980 Uncharacterised protein family UPF0066 37 145 1.3E-26 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain TMO_c0294 acb3cd15cc6b8d30af8ab34657983682 166 Gene3D G3DSA:2.40.30.70 2 148 1.2E-43 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily TMO_1183 1d84e5a405c294535919361cbb96caf7 328 SMART SM00382 46 242 9.7E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1183 1d84e5a405c294535919361cbb96caf7 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 6.0E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_1183 1d84e5a405c294535919361cbb96caf7 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 322 9.9E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_1183 1d84e5a405c294535919361cbb96caf7 328 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1183 1d84e5a405c294535919361cbb96caf7 328 SUPERFAMILY SSF52540 46 306 1.13E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1183 1d84e5a405c294535919361cbb96caf7 328 Pfam PF00005 ABC transporter 38 184 4.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1183 1d84e5a405c294535919361cbb96caf7 328 Gene3D G3DSA:3.40.50.300 20 327 1.3E-90 T 14-10-2018 TMO_1466 0a65c2c040969a33e2fc32a131beec1d 218 Gene3D G3DSA:2.140.10.10 1 211 1.4E-37 T 14-10-2018 TMO_1466 0a65c2c040969a33e2fc32a131beec1d 218 SMART SM00564 135 167 0.0041 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_1466 0a65c2c040969a33e2fc32a131beec1d 218 SMART SM00564 71 106 250.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_1466 0a65c2c040969a33e2fc32a131beec1d 218 SUPERFAMILY SSF50998 2 213 5.49E-48 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TMO_1466 0a65c2c040969a33e2fc32a131beec1d 218 Pfam PF01011 PQQ enzyme repeat 140 177 2.5E-7 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TMO_3039 0cf4bb3bf31a706b946bcac28cfc448d 233 SUPERFAMILY SSF48498 101 213 2.87E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_3039 0cf4bb3bf31a706b946bcac28cfc448d 233 Gene3D G3DSA:1.10.357.10 72 219 4.5E-10 T 14-10-2018 TMO_3039 0cf4bb3bf31a706b946bcac28cfc448d 233 Gene3D G3DSA:1.10.10.60 9 71 2.5E-17 T 14-10-2018 TMO_3039 0cf4bb3bf31a706b946bcac28cfc448d 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 8.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_3039 0cf4bb3bf31a706b946bcac28cfc448d 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 2.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_3039 0cf4bb3bf31a706b946bcac28cfc448d 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 2.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_3039 0cf4bb3bf31a706b946bcac28cfc448d 233 SUPERFAMILY SSF46689 17 95 3.13E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0245 a64a4e8394eba8c0508ec31ff57fe8c4 347 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 303 1.6E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_0477 4d75dd3b96282309f67f593b1e7c0029 233 Pfam PF06904 Extensin-like protein C-terminus 62 233 1.9E-59 T 14-10-2018 IPR009683 Extensin-like, C-terminal TMO_2183 08a050e537bd38c13ab628783f334c41 262 SUPERFAMILY SSF52833 32 246 1.33E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_2183 08a050e537bd38c13ab628783f334c41 262 Gene3D G3DSA:3.40.30.10 27 241 4.8E-63 T 14-10-2018 TMO_2183 08a050e537bd38c13ab628783f334c41 262 Pfam PF01323 DSBA-like thioredoxin domain 34 238 2.3E-36 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TMO_c0037 e93af89baa9c0e0a57ca0bda390e77b6 963 SUPERFAMILY SSF52540 487 884 4.68E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0037 e93af89baa9c0e0a57ca0bda390e77b6 963 Gene3D G3DSA:3.40.50.300 513 715 6.9E-9 T 14-10-2018 TMO_c0037 e93af89baa9c0e0a57ca0bda390e77b6 963 Gene3D G3DSA:3.40.50.300 716 913 4.5E-17 T 14-10-2018 TMO_c0037 e93af89baa9c0e0a57ca0bda390e77b6 963 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 65 343 1.1E-71 T 14-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase TMO_c0037 e93af89baa9c0e0a57ca0bda390e77b6 963 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 54 954 0.0 T 14-10-2018 IPR022303 Conjugative transfer ATPase TMO_0502 8c4f08a711fb02583ed7811fded5db34 395 Gene3D G3DSA:1.20.1250.20 11 196 8.6E-11 T 14-10-2018 TMO_0502 8c4f08a711fb02583ed7811fded5db34 395 Gene3D G3DSA:1.20.1250.20 213 395 1.6E-12 T 14-10-2018 TMO_0502 8c4f08a711fb02583ed7811fded5db34 395 SUPERFAMILY SSF103473 13 394 5.75E-32 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0502 8c4f08a711fb02583ed7811fded5db34 395 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 27 387 2.7E-53 T 14-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB TMO_c0513 da3bfb33d1106314cc665524d6c951da 170 Gene3D G3DSA:3.40.630.30 1 169 2.4E-40 T 14-10-2018 TMO_c0513 da3bfb33d1106314cc665524d6c951da 170 Pfam PF13527 Acetyltransferase (GNAT) domain 1 128 3.3E-10 T 14-10-2018 TMO_c0513 da3bfb33d1106314cc665524d6c951da 170 SUPERFAMILY SSF55729 2 129 4.43E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_1288 dc75f6b6b56b2309c8f12a2a5b836c44 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 69 1.0E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1288 dc75f6b6b56b2309c8f12a2a5b836c44 233 SUPERFAMILY SSF46689 10 87 7.48E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1288 dc75f6b6b56b2309c8f12a2a5b836c44 233 Gene3D G3DSA:1.10.357.10 13 228 4.6E-51 T 14-10-2018 TMO_2090 326e6ebbde1b3d6eb6cc128e71a505da 268 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 23 267 6.4E-88 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 TMO_2090 326e6ebbde1b3d6eb6cc128e71a505da 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 267 9.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2090 326e6ebbde1b3d6eb6cc128e71a505da 268 Gene3D G3DSA:1.10.3720.10 69 266 1.0E-31 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2090 326e6ebbde1b3d6eb6cc128e71a505da 268 SUPERFAMILY SSF161098 72 259 2.09E-32 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0009 2e1fd704ca0c879b84eb65b3a381252e 406 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 18 391 8.5E-92 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 TMO_0009 2e1fd704ca0c879b84eb65b3a381252e 406 Pfam PF07690 Major Facilitator Superfamily 24 366 1.5E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0009 2e1fd704ca0c879b84eb65b3a381252e 406 Gene3D G3DSA:1.20.1720.10 18 396 4.9E-97 T 14-10-2018 TMO_0009 2e1fd704ca0c879b84eb65b3a381252e 406 SUPERFAMILY SSF103473 16 399 1.06E-59 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_1399 47086696632fe0815ce1269ce41570db 332 Pfam PF02470 MlaD protein 42 114 9.6E-12 T 14-10-2018 IPR003399 Mce/MlaD TMO_2504 c9c025660334b568582c1b0c35770eb4 256 Gene3D G3DSA:2.40.30.130 1 101 2.7E-18 T 14-10-2018 TMO_2504 c9c025660334b568582c1b0c35770eb4 256 SMART SM00863 199 251 1.1E-12 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TMO_2504 c9c025660334b568582c1b0c35770eb4 256 Gene3D G3DSA:3.30.980.10 103 256 1.3E-30 T 14-10-2018 TMO_2504 c9c025660334b568582c1b0c35770eb4 256 Pfam PF01411 tRNA synthetases class II (A) 22 66 6.6E-7 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TMO_2504 c9c025660334b568582c1b0c35770eb4 256 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 199 251 1.5E-11 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TMO_2504 c9c025660334b568582c1b0c35770eb4 256 SUPERFAMILY SSF50447 2 66 3.39E-12 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TMO_2504 c9c025660334b568582c1b0c35770eb4 256 SUPERFAMILY SSF55186 103 252 6.8E-29 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TMO_a0570 2d20f2b62ead17087838905e634b0549 628 SUPERFAMILY SSF56801 37 563 3.14E-108 T 14-10-2018 TMO_a0570 2d20f2b62ead17087838905e634b0549 628 Pfam PF00501 AMP-binding enzyme 44 467 4.4E-65 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0570 2d20f2b62ead17087838905e634b0549 628 Pfam PF13193 AMP-binding enzyme C-terminal domain 477 552 1.2E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0570 2d20f2b62ead17087838905e634b0549 628 Gene3D G3DSA:3.30.300.310 464 567 9.4E-23 T 14-10-2018 TMO_a0570 2d20f2b62ead17087838905e634b0549 628 Gene3D G3DSA:3.40.50.12780 37 463 3.9E-80 T 14-10-2018 TMO_0330 a1356b19cc11dbcdac4159000664a848 234 SUPERFAMILY SSF52540 4 231 3.04E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0330 a1356b19cc11dbcdac4159000664a848 234 SMART SM00382 29 232 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0330 a1356b19cc11dbcdac4159000664a848 234 Pfam PF00005 ABC transporter 21 162 1.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0330 a1356b19cc11dbcdac4159000664a848 234 Gene3D G3DSA:3.40.50.300 2 234 5.9E-53 T 14-10-2018 TMO_3130 62e9c294ce2d9bd4552ccb2412538c98 164 Hamap MF_00775 UPF0311 protein . 10 164 23.746 T 14-10-2018 IPR020915 Uncharacterised protein family UPF0311 TMO_3130 62e9c294ce2d9bd4552ccb2412538c98 164 Gene3D G3DSA:2.40.160.20 8 164 8.3E-52 T 14-10-2018 TMO_3130 62e9c294ce2d9bd4552ccb2412538c98 164 Pfam PF11578 Protein of unknown function (DUF3237) 10 163 2.5E-38 T 14-10-2018 IPR020915 Uncharacterised protein family UPF0311 TMO_1838 f022c765baa95b890cba386f1da9eb69 205 Gene3D G3DSA:1.20.120.1760 1 188 8.9E-10 T 14-10-2018 TMO_1838 f022c765baa95b890cba386f1da9eb69 205 PIRSF PIRSF000847 4 196 1.9E-44 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TMO_1838 f022c765baa95b890cba386f1da9eb69 205 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 71 1.9E-14 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_2381 12cbfd8a2a432ccc7ccacfde33ae3a17 314 Pfam PF04233 Phage Mu protein F like protein 2 71 1.8E-7 T 14-10-2018 IPR006528 Phage head morphogenesis domain TMO_0906 a7df5f5c44ee59ca13756abf2b830bef 114 Gene3D G3DSA:3.30.1150.10 1 112 4.5E-24 T 14-10-2018 TMO_0906 a7df5f5c44ee59ca13756abf2b830bef 114 SUPERFAMILY SSF74653 10 110 6.93E-14 T 14-10-2018 TMO_0906 a7df5f5c44ee59ca13756abf2b830bef 114 Pfam PF13103 TonB C terminal 19 89 3.9E-6 T 14-10-2018 TMO_b0124 cd63423c97328879b1189fb914786b3b 196 SUPERFAMILY SSF46689 2 60 8.03E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0124 cd63423c97328879b1189fb914786b3b 196 Gene3D G3DSA:1.10.357.10 2 191 3.5E-15 T 14-10-2018 TMO_b0124 cd63423c97328879b1189fb914786b3b 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 52 2.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2160 873f3c4ba83b446a878216e50619289b 202 Gene3D G3DSA:1.10.357.10 7 198 1.1E-35 T 14-10-2018 TMO_2160 873f3c4ba83b446a878216e50619289b 202 SUPERFAMILY SSF46689 5 72 2.82E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2160 873f3c4ba83b446a878216e50619289b 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2160 873f3c4ba83b446a878216e50619289b 202 SUPERFAMILY SSF48498 89 198 4.45E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_c0122 dd8c931cd8de784bff09e325a63a62f3 270 Gene3D G3DSA:3.40.190.10 39 256 1.0E-6 T 14-10-2018 TMO_c0122 dd8c931cd8de784bff09e325a63a62f3 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 258 2.6E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_c0122 dd8c931cd8de784bff09e325a63a62f3 270 SUPERFAMILY SSF53850 31 260 3.98E-18 T 14-10-2018 TMO_c0122 dd8c931cd8de784bff09e325a63a62f3 270 Gene3D G3DSA:3.40.190.10 121 222 1.0E-6 T 14-10-2018 TMO_c0391 c63f3e51ad23d52c5234f5cb24dd7dc3 309 Pfam PF02678 Pirin 36 139 1.2E-30 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 TMO_c0391 c63f3e51ad23d52c5234f5cb24dd7dc3 309 Gene3D G3DSA:2.60.120.10 161 262 1.9E-59 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_c0391 c63f3e51ad23d52c5234f5cb24dd7dc3 309 Gene3D G3DSA:2.60.120.10 33 288 1.9E-59 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_c0391 c63f3e51ad23d52c5234f5cb24dd7dc3 309 SUPERFAMILY SSF51182 24 296 1.4E-68 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_c0391 c63f3e51ad23d52c5234f5cb24dd7dc3 309 Pfam PF05726 Pirin C-terminal cupin domain 194 290 1.3E-17 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 TMO_c0391 c63f3e51ad23d52c5234f5cb24dd7dc3 309 PIRSF PIRSF006232 17 302 1.4E-75 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 TMO_a0291 f96fe916f01895508257bb2088cb8ffd 225 SUPERFAMILY SSF50969 31 222 1.57E-24 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TMO_a0291 f96fe916f01895508257bb2088cb8ffd 225 Gene3D G3DSA:2.130.10.10 9 222 1.5E-14 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TMO_0674 4975783ae66dadffc25ae67716402193 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 336 1.4E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_a0012 3657a08664ec7644d7d76ca1edeab8f9 327 SUPERFAMILY SSF52768 13 320 1.3E-77 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily TMO_a0012 3657a08664ec7644d7d76ca1edeab8f9 327 ProSitePatterns PS01053 Arginase family signature. 243 264 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 TMO_a0012 3657a08664ec7644d7d76ca1edeab8f9 327 Gene3D G3DSA:3.40.800.10 10 326 6.7E-84 T 14-10-2018 TMO_a0012 3657a08664ec7644d7d76ca1edeab8f9 327 Pfam PF00491 Arginase family 12 313 8.0E-67 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 TMO_a0012 3657a08664ec7644d7d76ca1edeab8f9 327 PRINTS PR00116 Arginase signature 111 126 2.0E-45 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 TMO_a0012 3657a08664ec7644d7d76ca1edeab8f9 327 PRINTS PR00116 Arginase signature 138 165 2.0E-45 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 TMO_a0012 3657a08664ec7644d7d76ca1edeab8f9 327 PRINTS PR00116 Arginase signature 240 269 2.0E-45 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 TMO_a0012 3657a08664ec7644d7d76ca1edeab8f9 327 PRINTS PR00116 Arginase signature 275 289 2.0E-45 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 TMO_a0012 3657a08664ec7644d7d76ca1edeab8f9 327 PRINTS PR00116 Arginase signature 191 209 2.0E-45 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 TMO_a0012 3657a08664ec7644d7d76ca1edeab8f9 327 TIGRFAM TIGR01229 rocF_arginase: arginase 15 317 1.1E-86 T 14-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 TMO_d0069 05348653f3af327f94039f0a224c0e96 375 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 38 365 44.999 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TMO_d0069 05348653f3af327f94039f0a224c0e96 375 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 51 214 1.4E-72 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TMO_d0069 05348653f3af327f94039f0a224c0e96 375 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 51 363 9.7E-134 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TMO_d0069 05348653f3af327f94039f0a224c0e96 375 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 220 363 6.8E-68 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TMO_d0069 05348653f3af327f94039f0a224c0e96 375 Gene3D G3DSA:1.10.3730.40 219 375 9.3E-76 T 14-10-2018 TMO_d0069 05348653f3af327f94039f0a224c0e96 375 Gene3D G3DSA:3.40.50.720 29 218 1.1E-76 T 14-10-2018 TMO_d0069 05348653f3af327f94039f0a224c0e96 375 SUPERFAMILY SSF48179 220 369 5.95E-73 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TMO_d0069 05348653f3af327f94039f0a224c0e96 375 PIRSF PIRSF000116 238 367 1.2E-14 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TMO_d0069 05348653f3af327f94039f0a224c0e96 375 PIRSF PIRSF000116 36 243 2.0E-43 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TMO_d0069 05348653f3af327f94039f0a224c0e96 375 SUPERFAMILY SSF51735 38 219 2.91E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0322 7db96a02851e547776117a851ba5916a 384 Gene3D G3DSA:3.40.50.2000 24 353 1.4E-10 T 14-10-2018 TMO_a0322 7db96a02851e547776117a851ba5916a 384 Gene3D G3DSA:3.40.50.2000 171 344 1.4E-10 T 14-10-2018 TMO_a0322 7db96a02851e547776117a851ba5916a 384 Pfam PF13524 Glycosyl transferases group 1 272 354 6.9E-18 T 14-10-2018 TMO_a0322 7db96a02851e547776117a851ba5916a 384 SUPERFAMILY SSF53756 2 359 2.09E-19 T 14-10-2018 TMO_0573 d5ef7f877fb5d19c8165a6999e54aa19 251 Gene3D G3DSA:1.20.1260.10 16 250 3.8E-62 T 14-10-2018 IPR012347 Ferritin-like TMO_0573 d5ef7f877fb5d19c8165a6999e54aa19 251 Pfam PF05138 Phenylacetic acid catabolic protein 81 245 6.1E-19 T 14-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 TMO_0573 d5ef7f877fb5d19c8165a6999e54aa19 251 SUPERFAMILY SSF47240 28 243 9.6E-35 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_0613 9d202dbf5ce06dbe612fe86720a736c1 219 Pfam PF01810 LysE type translocator 18 216 5.5E-25 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_3460 f80c2ec70d74d2cb3723e9b64584f9c1 289 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 7 287 1.3E-130 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 TMO_3460 f80c2ec70d74d2cb3723e9b64584f9c1 289 Pfam PF00756 Putative esterase 26 281 1.1E-56 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 TMO_3460 f80c2ec70d74d2cb3723e9b64584f9c1 289 Gene3D G3DSA:3.40.50.1820 6 288 5.2E-86 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3460 f80c2ec70d74d2cb3723e9b64584f9c1 289 SUPERFAMILY SSF53474 6 287 2.28E-85 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0347 18c18de52e2f5ae9acd0778fdcde7b35 496 Gene3D G3DSA:3.90.1300.10 17 491 6.9E-115 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_a0347 18c18de52e2f5ae9acd0778fdcde7b35 496 ProSitePatterns PS00571 Amidases signature. 172 203 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TMO_a0347 18c18de52e2f5ae9acd0778fdcde7b35 496 Pfam PF01425 Amidase 44 473 7.4E-90 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_a0347 18c18de52e2f5ae9acd0778fdcde7b35 496 SUPERFAMILY SSF75304 19 484 2.88E-109 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1247 5b8bdd91ece81a504aab22bd4f09b9ec 120 Pfam PF06627 Protein of unknown function (DUF1153) 51 106 3.2E-17 T 14-10-2018 IPR009534 Protein of unknown function DUF1153 TMO_1247 5b8bdd91ece81a504aab22bd4f09b9ec 120 SUPERFAMILY SSF48295 50 106 1.73E-10 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TMO_1247 5b8bdd91ece81a504aab22bd4f09b9ec 120 Gene3D G3DSA:1.10.10.10 43 118 7.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0211 c49fce324e10677dd79bb08b7e191560 358 Pfam PF01734 Patatin-like phospholipase 19 199 4.5E-23 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TMO_b0211 c49fce324e10677dd79bb08b7e191560 358 Gene3D G3DSA:3.40.1090.10 11 331 8.0E-48 T 14-10-2018 TMO_b0211 c49fce324e10677dd79bb08b7e191560 358 SUPERFAMILY SSF52151 18 269 1.18E-46 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TMO_a0530 4fdc3e4e7746c24ec1c574834cb7a3fb 137 SUPERFAMILY SSF51735 8 128 1.09E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0530 4fdc3e4e7746c24ec1c574834cb7a3fb 137 Pfam PF00106 short chain dehydrogenase 10 127 2.9E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0530 4fdc3e4e7746c24ec1c574834cb7a3fb 137 Gene3D G3DSA:3.40.50.720 3 137 2.0E-28 T 14-10-2018 TMO_a0530 4fdc3e4e7746c24ec1c574834cb7a3fb 137 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 6.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0530 4fdc3e4e7746c24ec1c574834cb7a3fb 137 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0254 73c4c75491d6b0f169aec47928df9f0f 293 Pfam PF13468 Glyoxalase-like domain 8 199 2.3E-14 T 14-10-2018 IPR025870 Glyoxalase-like domain TMO_b0254 73c4c75491d6b0f169aec47928df9f0f 293 SUPERFAMILY SSF54593 5 118 4.42E-9 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_2239 c5aae7fff974bae843e33a2ecdb04327 88 Pfam PF00462 Glutaredoxin 9 66 2.2E-13 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TMO_2239 c5aae7fff974bae843e33a2ecdb04327 88 Gene3D G3DSA:3.40.30.10 7 82 4.2E-17 T 14-10-2018 TMO_2239 c5aae7fff974bae843e33a2ecdb04327 88 SUPERFAMILY SSF52833 6 69 7.66E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_b0450 7f298372d75e9e11c70de6ae581ced4a 897 Gene3D G3DSA:1.20.1250.20 7 189 1.4E-44 T 14-10-2018 TMO_b0450 7f298372d75e9e11c70de6ae581ced4a 897 Gene3D G3DSA:1.20.1250.20 435 669 3.4E-82 T 14-10-2018 TMO_b0450 7f298372d75e9e11c70de6ae581ced4a 897 Gene3D G3DSA:1.20.1250.20 209 419 1.7E-53 T 14-10-2018 TMO_b0450 7f298372d75e9e11c70de6ae581ced4a 897 Gene3D G3DSA:1.20.1250.20 670 895 1.3E-69 T 14-10-2018 TMO_b0450 7f298372d75e9e11c70de6ae581ced4a 897 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 139 167 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TMO_b0450 7f298372d75e9e11c70de6ae581ced4a 897 TIGRFAM TIGR00886 2A0108: nitrite transporter 468 849 6.6E-100 T 14-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 TMO_b0450 7f298372d75e9e11c70de6ae581ced4a 897 Pfam PF07690 Major Facilitator Superfamily 21 323 7.5E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_b0450 7f298372d75e9e11c70de6ae581ced4a 897 Pfam PF07690 Major Facilitator Superfamily 500 785 1.5E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_b0450 7f298372d75e9e11c70de6ae581ced4a 897 SUPERFAMILY SSF103473 464 892 1.44E-32 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_b0450 7f298372d75e9e11c70de6ae581ced4a 897 SUPERFAMILY SSF103473 6 418 4.84E-63 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0388 d211a3a30243e20049f1316c4c29bb9a 199 PIRSF PIRSF029950 1 199 5.1E-77 T 14-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 TMO_c0388 d211a3a30243e20049f1316c4c29bb9a 199 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 2 24 2.1E-7 T 14-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal TMO_c0388 d211a3a30243e20049f1316c4c29bb9a 199 Gene3D G3DSA:3.30.70.2660 1 199 7.6E-85 T 14-10-2018 TMO_c0388 d211a3a30243e20049f1316c4c29bb9a 199 TIGRFAM TIGR01876 cas_Cas5d: CRISPR-associated protein Cas5, subtype I-C/DVULG 1 198 6.3E-48 T 14-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 TMO_c0388 d211a3a30243e20049f1316c4c29bb9a 199 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 1 190 2.6E-35 T 14-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 TMO_b0363 149629dcc9d409daf7b344e6a388aad7 434 PIRSF PIRSF006066 7 434 4.6E-81 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0363 149629dcc9d409daf7b344e6a388aad7 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 425 6.6E-80 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_b0363 149629dcc9d409daf7b344e6a388aad7 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 431 2.9E-83 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0300 b7d1a4e066060aca7c71b1538779bfc7 166 Pfam PF10722 Putative bacterial sensory transduction regulator 15 143 1.1E-30 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN TMO_2758 d0421c1e6583427dac492204f64c535c 220 Gene3D G3DSA:3.40.50.300 28 220 1.1E-67 T 14-10-2018 TMO_2758 d0421c1e6583427dac492204f64c535c 220 SUPERFAMILY SSF52540 30 220 4.16E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2758 d0421c1e6583427dac492204f64c535c 220 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 49 220 5.1E-63 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 TMO_2758 d0421c1e6583427dac492204f64c535c 220 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 49 220 5.6E-71 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 TMO_2758 d0421c1e6583427dac492204f64c535c 220 PIRSF PIRSF015617 23 220 3.0E-72 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 TMO_2758 d0421c1e6583427dac492204f64c535c 220 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 22 43 4.6E-6 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 TMO_c0067 3999982305492b1328e19ad12057f73c 229 Pfam PF11679 Protein of unknown function (DUF3275) 14 222 1.2E-93 T 14-10-2018 IPR021693 Protein of unknown function DUF3275 TMO_a0400 f27c665b621a774a48ddaa264623d2ed 280 Pfam PF02653 Branched-chain amino acid transport system / permease component 1 268 1.1E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2753 50a6b132d010652cbce239b8d30a5f3d 140 Gene3D G3DSA:3.30.70.1060 1 117 4.4E-30 T 14-10-2018 TMO_2753 50a6b132d010652cbce239b8d30a5f3d 140 Pfam PF03795 YCII-related domain 1 112 4.3E-22 T 14-10-2018 IPR005545 YCII-related TMO_2753 50a6b132d010652cbce239b8d30a5f3d 140 SUPERFAMILY SSF54909 1 118 2.15E-35 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_a0361 b28d1e104997b50be5a5d74c4c47e3ce 153 SUPERFAMILY SSF53098 2 136 1.82E-23 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_a0361 b28d1e104997b50be5a5d74c4c47e3ce 153 Pfam PF00665 Integrase core domain 3 100 1.2E-16 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TMO_1354 7e543ab3a5b90b0eaba6a9763ca381d3 302 SUPERFAMILY SSF160240 222 297 3.66E-6 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TMO_1354 7e543ab3a5b90b0eaba6a9763ca381d3 302 Gene3D G3DSA:1.20.1510.10 11 213 2.6E-17 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_1354 7e543ab3a5b90b0eaba6a9763ca381d3 302 Gene3D G3DSA:3.30.70.1350 214 301 9.3E-7 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TMO_1354 7e543ab3a5b90b0eaba6a9763ca381d3 302 SUPERFAMILY SSF161111 10 215 1.31E-21 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_1354 7e543ab3a5b90b0eaba6a9763ca381d3 302 Pfam PF01545 Cation efflux family 17 214 5.3E-22 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_1801 07d9099687092161b04e08e0fb57e364 387 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 83 376 1.7E-72 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 TMO_1801 07d9099687092161b04e08e0fb57e364 387 SUPERFAMILY SSF51556 79 381 2.49E-66 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_1801 07d9099687092161b04e08e0fb57e364 387 Gene3D G3DSA:3.20.20.140 56 382 9.7E-86 T 14-10-2018 TMO_1990 2a4f208529214cf1a708d12a238d9922 200 Gene3D G3DSA:3.60.10.10 1 200 9.2E-11 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TMO_1990 2a4f208529214cf1a708d12a238d9922 200 SUPERFAMILY SSF56219 1 199 7.2E-13 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TMO_c0748 c31e8c5990eedddb21a980085eef8b2c 139 Pfam PF09391 Protein of unknown function (DUF2000) 6 139 3.0E-32 T 14-10-2018 IPR018988 Protein of unknown function DUF2000 TMO_c0748 c31e8c5990eedddb21a980085eef8b2c 139 SUPERFAMILY SSF102462 5 139 5.75E-29 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 TMO_c0748 c31e8c5990eedddb21a980085eef8b2c 139 PIRSF PIRSF033736 1 139 4.8E-25 T 14-10-2018 IPR017021 Uncharacterised conserved protein UCP033763 TMO_d0054 960911aae09d15b825f3cc65abc92bfe 328 Pfam PF16220 Domain of unknown function (DUF4880) 22 62 5.4E-13 T 14-10-2018 IPR032623 FecR, N-terminal TMO_d0054 960911aae09d15b825f3cc65abc92bfe 328 Gene3D G3DSA:2.60.120.1440 116 247 1.4E-27 T 14-10-2018 TMO_d0054 960911aae09d15b825f3cc65abc92bfe 328 Gene3D G3DSA:3.55.50.30 254 327 1.3E-5 T 14-10-2018 TMO_d0054 960911aae09d15b825f3cc65abc92bfe 328 PIRSF PIRSF018266 12 328 1.1E-86 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_d0054 960911aae09d15b825f3cc65abc92bfe 328 Pfam PF04773 FecR protein 122 214 5.8E-22 T 14-10-2018 IPR006860 FecR protein TMO_1369 0066bc77f63a6c4d30a9d5dd6ebb8bbe 96 SUPERFAMILY SSF54909 1 92 8.26E-26 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_1369 0066bc77f63a6c4d30a9d5dd6ebb8bbe 96 Gene3D G3DSA:3.30.70.100 1 96 7.5E-27 T 14-10-2018 TMO_1369 0066bc77f63a6c4d30a9d5dd6ebb8bbe 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 77 2.1E-20 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain TMO_3019 ad2cbee0ce1c23fa72afeb42533ed016 531 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 74 96 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site TMO_3019 ad2cbee0ce1c23fa72afeb42533ed016 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 449 2.3E-105 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_3019 ad2cbee0ce1c23fa72afeb42533ed016 531 PIRSF PIRSF002741 8 527 9.5E-121 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_3019 ad2cbee0ce1c23fa72afeb42533ed016 531 Gene3D G3DSA:3.40.190.10 206 518 2.0E-186 T 14-10-2018 TMO_3019 ad2cbee0ce1c23fa72afeb42533ed016 531 SUPERFAMILY SSF53850 25 526 2.71E-158 T 14-10-2018 TMO_3019 ad2cbee0ce1c23fa72afeb42533ed016 531 Gene3D G3DSA:3.90.76.10 45 205 2.0E-186 T 14-10-2018 TMO_3019 ad2cbee0ce1c23fa72afeb42533ed016 531 Gene3D G3DSA:3.10.105.10 287 505 2.0E-186 T 14-10-2018 TMO_2249 3d4eec21ecfa76494a75f464fb9b293c 76 Pfam PF12728 Helix-turn-helix domain 6 57 1.5E-6 T 14-10-2018 TMO_2249 3d4eec21ecfa76494a75f464fb9b293c 76 SUPERFAMILY SSF46955 5 56 1.1E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily TMO_3465 9363028f9b3abc9f32defa1fd3372b8f 223 SMART SM00749 155 218 4.7E-8 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria TMO_3465 9363028f9b3abc9f32defa1fd3372b8f 223 Pfam PF04972 BON domain 151 217 9.1E-16 T 14-10-2018 IPR007055 BON domain TMO_3465 9363028f9b3abc9f32defa1fd3372b8f 223 Pfam PF04972 BON domain 72 140 3.1E-11 T 14-10-2018 IPR007055 BON domain TMO_1234 b538ace15cf74ac2abc01e6db7bd0d4b 417 Gene3D G3DSA:1.20.1250.20 5 397 1.4E-38 T 14-10-2018 TMO_1234 b538ace15cf74ac2abc01e6db7bd0d4b 417 SUPERFAMILY SSF103473 8 395 2.62E-48 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_1234 b538ace15cf74ac2abc01e6db7bd0d4b 417 Pfam PF07690 Major Facilitator Superfamily 23 362 2.8E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0596 be7f1986f8eeb758cf720bc2f63851c5 483 Pfam PF01145 SPFH domain / Band 7 family 53 241 2.4E-24 T 14-10-2018 IPR001107 Band 7 domain TMO_c0596 be7f1986f8eeb758cf720bc2f63851c5 483 SUPERFAMILY SSF117892 82 223 5.75E-13 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily TMO_1623 40ed171b7802198f7547febb555c0e66 172 Gene3D G3DSA:3.10.50.30 93 171 8.1E-6 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 TMO_1623 40ed171b7802198f7547febb555c0e66 172 Pfam PF14760 Rnk N-terminus 46 86 7.0E-6 T 14-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain TMO_0193 07397719728c499552c6c35aab0e3c90 364 SUPERFAMILY SSF53756 1 360 2.26E-77 T 14-10-2018 TMO_0193 07397719728c499552c6c35aab0e3c90 364 Gene3D G3DSA:3.40.50.2000 1 165 2.5E-24 T 14-10-2018 TMO_0193 07397719728c499552c6c35aab0e3c90 364 Gene3D G3DSA:3.40.50.2000 166 341 7.8E-37 T 14-10-2018 TMO_0193 07397719728c499552c6c35aab0e3c90 364 Pfam PF13439 Glycosyltransferase Family 4 1 153 1.8E-28 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TMO_0193 07397719728c499552c6c35aab0e3c90 364 Pfam PF00534 Glycosyl transferases group 1 171 328 3.3E-27 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 TMO_1106 1e7bb0ee19527808be8dd4a369d9f944 249 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 62 6.8E-17 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain TMO_1106 1e7bb0ee19527808be8dd4a369d9f944 249 Gene3D G3DSA:3.30.1330.60 93 247 4.2E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_1106 1e7bb0ee19527808be8dd4a369d9f944 249 SUPERFAMILY SSF103088 122 239 1.16E-17 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_1106 1e7bb0ee19527808be8dd4a369d9f944 249 Pfam PF00691 OmpA family 133 215 6.0E-11 T 14-10-2018 IPR006665 OmpA-like domain TMO_b0440 0b2cc07bf5863de7dcfbee8e5b092702 395 Pfam PF13458 Periplasmic binding protein 32 368 4.8E-68 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_b0440 0b2cc07bf5863de7dcfbee8e5b092702 395 Gene3D G3DSA:3.40.50.2300 34 358 3.6E-89 T 14-10-2018 TMO_b0440 0b2cc07bf5863de7dcfbee8e5b092702 395 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 6.1E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0440 0b2cc07bf5863de7dcfbee8e5b092702 395 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 33 49 6.1E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0440 0b2cc07bf5863de7dcfbee8e5b092702 395 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 72 90 6.1E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0440 0b2cc07bf5863de7dcfbee8e5b092702 395 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 336 351 6.1E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0440 0b2cc07bf5863de7dcfbee8e5b092702 395 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 93 103 6.1E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_b0440 0b2cc07bf5863de7dcfbee8e5b092702 395 Gene3D G3DSA:3.40.50.2300 149 367 3.6E-89 T 14-10-2018 TMO_b0440 0b2cc07bf5863de7dcfbee8e5b092702 395 SUPERFAMILY SSF53822 32 388 1.58E-76 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_a0188 4b6528cff185bf63835253a6ef10cdd0 384 PIRSF PIRSF000267 7 383 9.7E-120 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 TMO_a0188 4b6528cff185bf63835253a6ef10cdd0 384 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 12 367 4.9E-105 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 TMO_a0188 4b6528cff185bf63835253a6ef10cdd0 384 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 380 3.9E-139 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 TMO_2828 d3bea9b8afd35b8d1ab2ee8a2371458d 276 Pfam PF00149 Calcineurin-like phosphoesterase 2 201 8.9E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TMO_2828 d3bea9b8afd35b8d1ab2ee8a2371458d 276 SUPERFAMILY SSF56300 2 252 1.52E-37 T 14-10-2018 TMO_2828 d3bea9b8afd35b8d1ab2ee8a2371458d 276 Gene3D G3DSA:3.60.21.10 1 263 1.9E-30 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like TMO_1620 3c706a60d6b1b4316859b20596890d94 133 Gene3D G3DSA:3.30.160.750 63 129 1.8E-22 T 14-10-2018 TMO_1620 3c706a60d6b1b4316859b20596890d94 133 SUPERFAMILY SSF56276 3 114 4.51E-40 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 TMO_1620 3c706a60d6b1b4316859b20596890d94 133 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 113 1.3E-42 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 TMO_1620 3c706a60d6b1b4316859b20596890d94 133 Gene3D G3DSA:3.30.360.110 1 62 2.3E-25 T 14-10-2018 TMO_1620 3c706a60d6b1b4316859b20596890d94 133 Pfam PF02675 S-adenosylmethionine decarboxylase 8 113 7.6E-37 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 TMO_1620 3c706a60d6b1b4316859b20596890d94 133 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 117 30.728 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 TMO_0692 c1a4f1dc9baa526df5aa7e16464fd460 139 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 58 120 1.1E-18 T 14-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal TMO_0692 c1a4f1dc9baa526df5aa7e16464fd460 139 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 19 53 2.9E-16 T 14-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal TMO_0692 c1a4f1dc9baa526df5aa7e16464fd460 139 SUPERFAMILY SSF50249 6 127 1.35E-37 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_0692 c1a4f1dc9baa526df5aa7e16464fd460 139 Gene3D G3DSA:1.10.12.20 11 58 8.3E-8 T 14-10-2018 TMO_0650 9e0bd12277a67794e7dc59699839fe93 193 Pfam PF09335 SNARE associated Golgi protein 51 153 6.9E-11 T 14-10-2018 IPR032816 SNARE associated Golgi protein TMO_a0488 484475ad6cda8ef93f49be36f7ea1d8e 101 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 31 97 1.8E-10 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D TMO_c0137 92262b85a6efe2a60d34156302cadb67 292 Gene3D G3DSA:3.90.25.10 138 252 6.5E-51 T 14-10-2018 TMO_c0137 92262b85a6efe2a60d34156302cadb67 292 Pfam PF05368 NmrA-like family 4 223 3.4E-30 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 TMO_c0137 92262b85a6efe2a60d34156302cadb67 292 SUPERFAMILY SSF51735 2 247 7.34E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0137 92262b85a6efe2a60d34156302cadb67 292 Gene3D G3DSA:3.40.50.720 5 197 6.5E-51 T 14-10-2018 TMO_a0399 87229f5723a0d87955cbe27313ae4d94 407 Pfam PF13458 Periplasmic binding protein 38 380 2.6E-54 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_a0399 87229f5723a0d87955cbe27313ae4d94 407 SUPERFAMILY SSF53822 38 403 3.7E-68 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_a0399 87229f5723a0d87955cbe27313ae4d94 407 Gene3D G3DSA:3.40.50.2300 45 368 1.5E-69 T 14-10-2018 TMO_a0399 87229f5723a0d87955cbe27313ae4d94 407 Gene3D G3DSA:3.40.50.2300 159 295 1.5E-69 T 14-10-2018 TMO_a0399 87229f5723a0d87955cbe27313ae4d94 407 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 38 54 4.2E-7 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_a0399 87229f5723a0d87955cbe27313ae4d94 407 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 60 76 4.2E-7 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_c0691 286394f375313f801910e47c6753346e 452 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 86 7.4E-7 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TMO_c0691 286394f375313f801910e47c6753346e 452 SUPERFAMILY SSF55781 155 325 9.38E-23 T 14-10-2018 TMO_c0691 286394f375313f801910e47c6753346e 452 Gene3D G3DSA:3.30.450.40 152 329 1.1E-25 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_c0691 286394f375313f801910e47c6753346e 452 Pfam PF13185 GAF domain 172 322 2.6E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_c0691 286394f375313f801910e47c6753346e 452 Gene3D G3DSA:2.30.110.10 16 140 4.2E-19 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_c0691 286394f375313f801910e47c6753346e 452 SUPERFAMILY SSF50475 16 87 3.42E-11 T 14-10-2018 TMO_c0691 286394f375313f801910e47c6753346e 452 SMART SM00065 172 331 3.7E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_2434 5f1ce877f9aaea197bbb29d21739b8d3 234 SUPERFAMILY SSF49482 7 233 3.92E-71 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_2434 5f1ce877f9aaea197bbb29d21739b8d3 234 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 13 234 2.9E-106 T 14-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 TMO_2434 5f1ce877f9aaea197bbb29d21739b8d3 234 Gene3D G3DSA:2.60.130.10 2 234 3.3E-84 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_2434 5f1ce877f9aaea197bbb29d21739b8d3 234 Pfam PF00775 Dioxygenase 44 226 5.6E-58 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 TMO_2434 5f1ce877f9aaea197bbb29d21739b8d3 234 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 77 105 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 TMO_2434 5f1ce877f9aaea197bbb29d21739b8d3 234 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 7 38 6.5E-14 T 14-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 TMO_a0543 da6358805379d3dd905ebde8c1cb4d26 187 SUPERFAMILY SSF48452 94 169 4.43E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_a0543 da6358805379d3dd905ebde8c1cb4d26 187 Gene3D G3DSA:1.25.40.10 91 172 2.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_b0180 eadf33b12164fc80291b3f06d66fee6c 293 Gene3D G3DSA:3.40.50.1820 2 276 5.6E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0180 eadf33b12164fc80291b3f06d66fee6c 293 SUPERFAMILY SSF53474 3 270 2.59E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0180 eadf33b12164fc80291b3f06d66fee6c 293 Pfam PF00561 alpha/beta hydrolase fold 22 258 1.3E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_1336 2ed969047ae3633ca94cfcec69b6f795 418 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 345 354 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 TMO_1336 2ed969047ae3633ca94cfcec69b6f795 418 SUPERFAMILY SSF48264 25 404 5.76E-59 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_1336 2ed969047ae3633ca94cfcec69b6f795 418 Gene3D G3DSA:1.10.630.10 13 410 8.4E-66 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_1336 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 317 332 4.2E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_1336 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 89 100 4.2E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_1336 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 343 352 4.2E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_1336 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 289 316 4.2E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_1336 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 272 283 4.2E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_1336 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 352 363 4.2E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_1336 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 136 152 4.2E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_1336 2ed969047ae3633ca94cfcec69b6f795 418 Pfam PF00067 Cytochrome P450 220 362 8.1E-22 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_2535 128e5d182e814847b4a041d8e8f3ebb5 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 310 1.2E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2535 128e5d182e814847b4a041d8e8f3ebb5 317 SUPERFAMILY SSF161098 31 310 1.83E-43 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2535 128e5d182e814847b4a041d8e8f3ebb5 317 Gene3D G3DSA:1.10.3720.10 29 314 3.6E-44 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0204 5c5c4e4f51798ecbdbc05de0cd875781 129 Pfam PF07681 DoxX 14 86 7.2E-10 T 14-10-2018 IPR032808 DoxX family TMO_0245 be6f3ab8233f5959d6e639cc30e7e64b 83 Pfam PF06568 Domain of unknown function (DUF1127) 38 65 1.7E-5 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 TMO_0252 9f8048d037c9e56a0fe258916f952d79 505 Gene3D G3DSA:3.50.50.60 312 440 9.3E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0252 9f8048d037c9e56a0fe258916f952d79 505 Gene3D G3DSA:3.50.50.60 10 172 2.9E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0252 9f8048d037c9e56a0fe258916f952d79 505 SUPERFAMILY SSF51905 21 403 4.21E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0252 9f8048d037c9e56a0fe258916f952d79 505 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 22 44 4.1E-5 T 14-10-2018 TMO_0252 9f8048d037c9e56a0fe258916f952d79 505 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 195 220 4.1E-5 T 14-10-2018 TMO_0252 9f8048d037c9e56a0fe258916f952d79 505 Gene3D G3DSA:3.50.50.60 173 250 4.1E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0252 9f8048d037c9e56a0fe258916f952d79 505 Pfam PF00743 Flavin-binding monooxygenase-like 96 234 2.4E-12 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_0252 9f8048d037c9e56a0fe258916f952d79 505 Pfam PF13450 NAD(P)-binding Rossmann-like domain 25 76 1.4E-7 T 14-10-2018 TMO_1897 94fc41ae284dd56eec84f9a1e91812cc 324 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 7 238 4.2E-61 T 14-10-2018 IPR023875 DNA metabolism protein, putative TMO_1897 94fc41ae284dd56eec84f9a1e91812cc 324 Pfam PF13566 Domain of unknown function (DUF4130 79 237 1.5E-40 T 14-10-2018 IPR025404 Domain of unknown function DUF4130 TMO_c0576 1ed9c399f12e6d1be388190f4ef2be19 170 SMART SM00347 52 152 6.6E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0576 1ed9c399f12e6d1be388190f4ef2be19 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 108 1.5E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0576 1ed9c399f12e6d1be388190f4ef2be19 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 128 1.5E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0576 1ed9c399f12e6d1be388190f4ef2be19 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 142 162 1.5E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0576 1ed9c399f12e6d1be388190f4ef2be19 170 Pfam PF12802 MarR family 57 116 3.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_c0576 1ed9c399f12e6d1be388190f4ef2be19 170 Gene3D G3DSA:1.10.10.10 32 165 4.1E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0576 1ed9c399f12e6d1be388190f4ef2be19 170 SUPERFAMILY SSF46785 34 165 2.18E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0653 5c29f5422fb192307a1fe7af301c1dd7 414 Gene3D G3DSA:1.20.1250.20 13 400 7.9E-18 T 14-10-2018 TMO_c0653 5c29f5422fb192307a1fe7af301c1dd7 414 SUPERFAMILY SSF103473 18 398 1.83E-21 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0653 5c29f5422fb192307a1fe7af301c1dd7 414 Pfam PF07690 Major Facilitator Superfamily 23 362 1.7E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_1837 fabf0d43a285e1e121fc7034c87a6edf 379 Pfam PF01594 AI-2E family transporter 11 338 2.8E-52 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like TMO_2417 a3a9e160bb6cc0ef68abf3761781c248 383 Pfam PF01757 Acyltransferase family 29 339 3.4E-28 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 TMO_1538 7b17fb99687716844b32c606568e9bcc 277 Pfam PF00902 Sec-independent protein translocase protein (TatC) 19 235 1.1E-68 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_1538 7b17fb99687716844b32c606568e9bcc 277 ProSitePatterns PS01218 TatC family signature. 168 187 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site TMO_1538 7b17fb99687716844b32c606568e9bcc 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 168 196 4.6E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_1538 7b17fb99687716844b32c606568e9bcc 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 16 43 4.6E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_1538 7b17fb99687716844b32c606568e9bcc 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 93 111 4.6E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_1538 7b17fb99687716844b32c606568e9bcc 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 111 137 4.6E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_1538 7b17fb99687716844b32c606568e9bcc 277 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 240 2.4E-68 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_1538 7b17fb99687716844b32c606568e9bcc 277 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 11 252 16.772 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_b0062 dfe91493368ff1ca028234bb45cbde10 312 Gene3D G3DSA:3.40.190.10 101 288 4.0E-37 T 14-10-2018 TMO_b0062 dfe91493368ff1ca028234bb45cbde10 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0062 dfe91493368ff1ca028234bb45cbde10 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0062 dfe91493368ff1ca028234bb45cbde10 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0062 dfe91493368ff1ca028234bb45cbde10 312 Gene3D G3DSA:1.10.10.10 7 95 2.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0062 dfe91493368ff1ca028234bb45cbde10 312 Pfam PF03466 LysR substrate binding domain 97 293 4.1E-27 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0062 dfe91493368ff1ca028234bb45cbde10 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.3E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0062 dfe91493368ff1ca028234bb45cbde10 312 SUPERFAMILY SSF46785 4 83 4.21E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0062 dfe91493368ff1ca028234bb45cbde10 312 Gene3D G3DSA:3.40.190.10 164 264 4.0E-37 T 14-10-2018 TMO_b0062 dfe91493368ff1ca028234bb45cbde10 312 SUPERFAMILY SSF53850 96 296 1.61E-29 T 14-10-2018 TMO_c0147 d938084d7be11cf7ec664fe8f6b00e97 224 Pfam PF08511 COQ9 129 189 6.5E-7 T 14-10-2018 IPR013718 COQ9 Reactome: R-HSA-2142789 TMO_c0147 d938084d7be11cf7ec664fe8f6b00e97 224 SUPERFAMILY SSF46689 7 69 1.08E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0147 d938084d7be11cf7ec664fe8f6b00e97 224 Gene3D G3DSA:1.10.357.10 3 190 1.6E-58 T 14-10-2018 TMO_2625 33f600bbaa0a16d96f7cdc88220e985a 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2625 33f600bbaa0a16d96f7cdc88220e985a 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.659 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2625 33f600bbaa0a16d96f7cdc88220e985a 139 SUPERFAMILY SSF54686 1 134 4.06E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TMO_2625 33f600bbaa0a16d96f7cdc88220e985a 139 Gene3D G3DSA:3.90.1170.10 1 138 6.8E-56 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TMO_2625 33f600bbaa0a16d96f7cdc88220e985a 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 4.2E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2625 33f600bbaa0a16d96f7cdc88220e985a 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 4.2E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2625 33f600bbaa0a16d96f7cdc88220e985a 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 4.2E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2625 33f600bbaa0a16d96f7cdc88220e985a 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 4.2E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2625 33f600bbaa0a16d96f7cdc88220e985a 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 9.5E-58 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2625 33f600bbaa0a16d96f7cdc88220e985a 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.8E-49 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 TMO_2625 33f600bbaa0a16d96f7cdc88220e985a 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_1872 fe34f7e96ded921f63803bbda1da95ee 413 Gene3D G3DSA:3.40.50.150 119 385 3.4E-99 T 14-10-2018 TMO_1872 fe34f7e96ded921f63803bbda1da95ee 413 PIRSF PIRSF003085 7 402 2.3E-143 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 TMO_1872 fe34f7e96ded921f63803bbda1da95ee 413 SUPERFAMILY SSF53335 121 381 7.84E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1872 fe34f7e96ded921f63803bbda1da95ee 413 Pfam PF02353 Mycolic acid cyclopropane synthetase 113 376 1.8E-97 T 14-10-2018 TMO_2832 c42ada2cd444c4307a421b293e41f711 243 Pfam PF04028 Domain of unknown function (DUF374) 69 136 2.1E-26 T 14-10-2018 IPR007172 Domain of unknown function DUF374 TMO_2832 c42ada2cd444c4307a421b293e41f711 243 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 52 136 1.0E-12 T 14-10-2018 IPR007172 Domain of unknown function DUF374 TMO_a0241 d1d3f6aa9aa55a29619a6161275e008a 131 Gene3D G3DSA:3.40.50.720 12 73 1.9E-13 T 14-10-2018 TMO_a0241 d1d3f6aa9aa55a29619a6161275e008a 131 Gene3D G3DSA:3.90.180.10 74 113 1.9E-13 T 14-10-2018 TMO_a0241 d1d3f6aa9aa55a29619a6161275e008a 131 SUPERFAMILY SSF51735 14 95 1.77E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0570 9223a32cab7a591221768ba22e893975 77 Pfam PF00990 Diguanylate cyclase, GGDEF domain 28 71 1.6E-5 T 14-10-2018 IPR000160 GGDEF domain TMO_c0570 9223a32cab7a591221768ba22e893975 77 Gene3D G3DSA:3.30.70.270 6 77 2.1E-10 T 14-10-2018 TMO_c0570 9223a32cab7a591221768ba22e893975 77 SUPERFAMILY SSF55073 27 74 2.9E-8 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_c0076 d927175a4fe89f282a2d63d72abaa26a 135 Pfam PF09278 MerR, DNA binding 51 113 3.0E-18 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding TMO_c0076 d927175a4fe89f282a2d63d72abaa26a 135 SUPERFAMILY SSF46955 8 130 1.98E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily TMO_c0076 d927175a4fe89f282a2d63d72abaa26a 135 SMART SM00422 8 77 3.1E-29 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0076 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 1.2E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0076 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 1.2E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0076 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 1.2E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0076 d927175a4fe89f282a2d63d72abaa26a 135 Pfam PF00376 MerR family regulatory protein 9 46 3.0E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0076 d927175a4fe89f282a2d63d72abaa26a 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0076 d927175a4fe89f282a2d63d72abaa26a 135 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 7.8E-50 T 14-10-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 TMO_c0076 d927175a4fe89f282a2d63d72abaa26a 135 Gene3D G3DSA:1.10.1660.10 1 130 2.0E-31 T 14-10-2018 TMO_2922 634092df218234b45c27d20b39e3787c 375 Gene3D G3DSA:3.40.50.1980 28 372 2.9E-93 T 14-10-2018 TMO_2922 634092df218234b45c27d20b39e3787c 375 Pfam PF01497 Periplasmic binding protein 61 317 5.0E-20 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain TMO_2922 634092df218234b45c27d20b39e3787c 375 SUPERFAMILY SSF53807 29 343 2.98E-44 T 14-10-2018 TMO_0287 6335bec3ca3f3bfbc5bfacb6feaa3e55 273 SUPERFAMILY SSF161098 4 263 3.36E-53 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0287 6335bec3ca3f3bfbc5bfacb6feaa3e55 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 259 5.9E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0287 6335bec3ca3f3bfbc5bfacb6feaa3e55 273 Gene3D G3DSA:1.10.3720.10 12 266 2.8E-48 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0343 1f2dce04d2cf1ddba1226adc9d2192b4 382 SUPERFAMILY SSF53901 244 371 1.36E-18 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0343 1f2dce04d2cf1ddba1226adc9d2192b4 382 PIRSF PIRSF000429 4 381 1.8E-14 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_c0343 1f2dce04d2cf1ddba1226adc9d2192b4 382 Gene3D G3DSA:3.40.47.10 7 382 7.5E-107 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_c0343 1f2dce04d2cf1ddba1226adc9d2192b4 382 SUPERFAMILY SSF53901 17 224 1.36E-21 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_1802 ae97d6c7ad069af4b76e5fe489eb23f1 368 Gene3D G3DSA:3.40.190.170 24 336 4.1E-44 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_1802 ae97d6c7ad069af4b76e5fe489eb23f1 368 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 130 263 1.5E-8 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_3397 ad05fa5a459bd62f0b0dac50fa2acc76 303 Gene3D G3DSA:3.40.190.10 166 258 1.8E-42 T 14-10-2018 TMO_3397 ad05fa5a459bd62f0b0dac50fa2acc76 303 SUPERFAMILY SSF53850 93 289 6.67E-41 T 14-10-2018 TMO_3397 ad05fa5a459bd62f0b0dac50fa2acc76 303 Gene3D G3DSA:3.40.190.10 94 284 1.8E-42 T 14-10-2018 TMO_3397 ad05fa5a459bd62f0b0dac50fa2acc76 303 Gene3D G3DSA:1.10.10.10 5 91 6.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3397 ad05fa5a459bd62f0b0dac50fa2acc76 303 SUPERFAMILY SSF46785 5 110 7.3E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3397 ad05fa5a459bd62f0b0dac50fa2acc76 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.1E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_3397 ad05fa5a459bd62f0b0dac50fa2acc76 303 Pfam PF03466 LysR substrate binding domain 92 287 8.4E-43 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_a0531 81cbd55d36447f1bc86322c95e222d84 306 Gene3D G3DSA:3.40.190.10 91 297 1.2E-54 T 14-10-2018 TMO_a0531 81cbd55d36447f1bc86322c95e222d84 306 Gene3D G3DSA:1.10.10.10 1 87 2.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0531 81cbd55d36447f1bc86322c95e222d84 306 Gene3D G3DSA:3.40.190.10 169 273 1.2E-54 T 14-10-2018 TMO_a0531 81cbd55d36447f1bc86322c95e222d84 306 SUPERFAMILY SSF53850 90 301 9.59E-35 T 14-10-2018 TMO_a0531 81cbd55d36447f1bc86322c95e222d84 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.5E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_a0531 81cbd55d36447f1bc86322c95e222d84 306 SUPERFAMILY SSF46785 2 81 2.63E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0531 81cbd55d36447f1bc86322c95e222d84 306 Pfam PF03466 LysR substrate binding domain 93 302 8.8E-20 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_0974 071a3bae1b454be42478903370b8be99 206 SUPERFAMILY SSF46689 16 85 1.99E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0974 071a3bae1b454be42478903370b8be99 206 Gene3D G3DSA:1.10.10.60 8 68 2.0E-20 T 14-10-2018 TMO_0974 071a3bae1b454be42478903370b8be99 206 SUPERFAMILY SSF48498 100 204 2.91E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_0974 071a3bae1b454be42478903370b8be99 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 5.5E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0974 071a3bae1b454be42478903370b8be99 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 5.5E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0974 071a3bae1b454be42478903370b8be99 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 72 7.1E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0974 071a3bae1b454be42478903370b8be99 206 Gene3D G3DSA:1.10.357.10 69 206 3.7E-30 T 14-10-2018 TMO_1081 7800977c64f02194d0ff48b68f90b1a3 814 Gene3D G3DSA:1.25.40.10 653 806 9.8E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_1081 7800977c64f02194d0ff48b68f90b1a3 814 SUPERFAMILY SSF48452 307 792 2.47E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_b0209 a5300f13a6124639a84c2f413106880f 590 SMART SM00044 329 555 5.7E-4 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_b0209 a5300f13a6124639a84c2f413106880f 590 SUPERFAMILY SSF55073 380 540 1.05E-30 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_b0209 a5300f13a6124639a84c2f413106880f 590 SUPERFAMILY SSF81343 11 192 1.05E-14 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_b0209 a5300f13a6124639a84c2f413106880f 590 Gene3D G3DSA:3.30.70.1230 376 566 2.3E-28 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_b0209 a5300f13a6124639a84c2f413106880f 590 Gene3D G3DSA:1.20.1300.10 4 205 2.5E-7 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_b0209 a5300f13a6124639a84c2f413106880f 590 Gene3D G3DSA:3.10.20.30 266 360 1.2E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_b0209 a5300f13a6124639a84c2f413106880f 590 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 384 538 6.2E-13 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_b0209 a5300f13a6124639a84c2f413106880f 590 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 270 346 6.4E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_b0209 a5300f13a6124639a84c2f413106880f 590 SUPERFAMILY SSF54292 269 354 6.51E-23 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_2029 e93cc926dc58d1b969159c02fee4388f 277 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 257 3.4E-79 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TMO_2029 e93cc926dc58d1b969159c02fee4388f 277 Pfam PF02673 Bacitracin resistance protein BacA 9 258 3.4E-83 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TMO_2029 e93cc926dc58d1b969159c02fee4388f 277 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 264 17.742 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TMO_3228 1082753f84b14ffa431ad42f560d39a0 309 Gene3D G3DSA:1.10.3720.10 16 302 2.0E-43 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3228 1082753f84b14ffa431ad42f560d39a0 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 299 1.4E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3228 1082753f84b14ffa431ad42f560d39a0 309 SUPERFAMILY SSF161098 20 305 2.49E-48 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1767 aaa46baeebf37cf2dc3a69aff8351809 462 Gene3D G3DSA:3.40.630.10 179 450 6.1E-12 T 14-10-2018 TMO_1767 aaa46baeebf37cf2dc3a69aff8351809 462 SUPERFAMILY SSF53187 10 446 3.35E-15 T 14-10-2018 TMO_b0031 070674ab821fd7a282064c7d109fc31c 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0031 070674ab821fd7a282064c7d109fc31c 293 SUPERFAMILY SSF53850 89 291 2.35E-43 T 14-10-2018 TMO_b0031 070674ab821fd7a282064c7d109fc31c 293 Pfam PF03466 LysR substrate binding domain 88 290 5.8E-47 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0031 070674ab821fd7a282064c7d109fc31c 293 SUPERFAMILY SSF46785 1 111 1.03E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0031 070674ab821fd7a282064c7d109fc31c 293 Gene3D G3DSA:1.10.10.10 2 90 3.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0031 070674ab821fd7a282064c7d109fc31c 293 Gene3D G3DSA:3.40.190.290 91 289 8.9E-60 T 14-10-2018 TMO_0113 08cc860e07da9cf7b24201958699e396 120 Gene3D G3DSA:3.40.1490.10 1 120 1.5E-43 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 TMO_0113 08cc860e07da9cf7b24201958699e396 120 Pfam PF09391 Protein of unknown function (DUF2000) 1 119 1.0E-34 T 14-10-2018 IPR018988 Protein of unknown function DUF2000 TMO_0113 08cc860e07da9cf7b24201958699e396 120 SUPERFAMILY SSF102462 1 120 7.85E-36 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 TMO_2011 ecb0887ecdb5dd0fe1737442d8430b21 265 SMART SM00382 40 237 1.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2011 ecb0887ecdb5dd0fe1737442d8430b21 265 Pfam PF00005 ABC transporter 32 187 1.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2011 ecb0887ecdb5dd0fe1737442d8430b21 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 238 258 4.1E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_2011 ecb0887ecdb5dd0fe1737442d8430b21 265 SUPERFAMILY SSF52540 14 257 4.5E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2011 ecb0887ecdb5dd0fe1737442d8430b21 265 Gene3D G3DSA:3.40.50.300 14 262 1.6E-58 T 14-10-2018 TMO_1265 dfa6f4a8a0f1648dbfce4f9bef1d1095 551 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 283 321 1.2E-4 T 14-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 TMO_1265 dfa6f4a8a0f1648dbfce4f9bef1d1095 551 Gene3D G3DSA:2.160.20.10 75 411 8.8E-37 T 14-10-2018 IPR012334 Pectin lyase fold TMO_1265 dfa6f4a8a0f1648dbfce4f9bef1d1095 551 Pfam PF12708 Pectate lyase superfamily protein 75 290 3.2E-11 T 14-10-2018 IPR024535 Pectate lyase superfamily protein TMO_1265 dfa6f4a8a0f1648dbfce4f9bef1d1095 551 SUPERFAMILY SSF51126 69 410 2.95E-26 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor TMO_2281 dbfa9bf6ee4d1eb4663e342ebc1b0779 55 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 2 45 1.6E-11 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component TMO_b0005 9f93ee7f0a852713ad37fc8372c8ce4c 572 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 38 397 2.4E-9 T 14-10-2018 IPR010090 Phage tail tape measure protein TMO_2542 68be353d418518d113dfd02d5d0cd7e3 483 Gene3D G3DSA:1.20.1740.10 96 480 4.9E-8 T 14-10-2018 TMO_2542 68be353d418518d113dfd02d5d0cd7e3 483 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 128 143 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_2542 68be353d418518d113dfd02d5d0cd7e3 483 PRINTS PR00175 Sodium/alanine symporter signature 221 239 8.5E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_2542 68be353d418518d113dfd02d5d0cd7e3 483 PRINTS PR00175 Sodium/alanine symporter signature 344 362 8.5E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_2542 68be353d418518d113dfd02d5d0cd7e3 483 PRINTS PR00175 Sodium/alanine symporter signature 447 467 8.5E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_2542 68be353d418518d113dfd02d5d0cd7e3 483 PRINTS PR00175 Sodium/alanine symporter signature 249 268 8.5E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_2542 68be353d418518d113dfd02d5d0cd7e3 483 PRINTS PR00175 Sodium/alanine symporter signature 128 150 8.5E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_2542 68be353d418518d113dfd02d5d0cd7e3 483 PRINTS PR00175 Sodium/alanine symporter signature 388 410 8.5E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_2542 68be353d418518d113dfd02d5d0cd7e3 483 TIGRFAM TIGR00835 agcS: amino acid carrier protein 50 476 4.4E-156 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_2542 68be353d418518d113dfd02d5d0cd7e3 483 Pfam PF01235 Sodium:alanine symporter family 95 480 4.6E-147 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_2503 6b26bb35cbee946b0d6ecc6e453f2662 334 Gene3D G3DSA:3.40.50.1100 9 312 7.5E-116 T 14-10-2018 TMO_2503 6b26bb35cbee946b0d6ecc6e453f2662 334 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 TMO_2503 6b26bb35cbee946b0d6ecc6e453f2662 334 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 306 5.3E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_2503 6b26bb35cbee946b0d6ecc6e453f2662 334 SUPERFAMILY SSF53686 2 327 1.83E-95 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_2503 6b26bb35cbee946b0d6ecc6e453f2662 334 Gene3D G3DSA:3.40.50.1100 38 151 7.5E-116 T 14-10-2018 TMO_0725 c244f1eb081a67ffc6bb61edf049e2c0 250 Gene3D G3DSA:3.40.50.150 66 172 4.6E-7 T 14-10-2018 TMO_0725 c244f1eb081a67ffc6bb61edf049e2c0 250 SUPERFAMILY SSF53335 51 165 1.48E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0297 9104ea0fed1c1f8b32cb708cfe8b886f 379 Gene3D G3DSA:3.60.70.12 4 229 3.9E-72 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TMO_0297 9104ea0fed1c1f8b32cb708cfe8b886f 379 Gene3D G3DSA:3.60.70.12 230 371 6.6E-32 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TMO_0297 9104ea0fed1c1f8b32cb708cfe8b886f 379 Pfam PF03576 Peptidase family S58 10 359 2.7E-67 T 14-10-2018 IPR005321 Peptidase S58, DmpA TMO_0297 9104ea0fed1c1f8b32cb708cfe8b886f 379 SUPERFAMILY SSF56266 3 366 2.62E-62 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TMO_0017 025760c398384901df3cdce4537461b2 391 SUPERFAMILY SSF161098 172 382 2.75E-44 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0017 025760c398384901df3cdce4537461b2 391 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 192 382 8.6E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0017 025760c398384901df3cdce4537461b2 391 Gene3D G3DSA:1.10.3720.10 143 386 1.1E-47 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0693 13a45d0dd651ba2410f665ef6b09e949 304 SUPERFAMILY SSF54637 8 160 2.28E-39 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0693 13a45d0dd651ba2410f665ef6b09e949 304 Gene3D G3DSA:3.10.129.10 3 159 1.6E-46 T 14-10-2018 TMO_0693 13a45d0dd651ba2410f665ef6b09e949 304 Pfam PF01575 MaoC like domain 163 270 1.4E-27 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_0693 13a45d0dd651ba2410f665ef6b09e949 304 Pfam PF13452 N-terminal half of MaoC dehydratase 49 137 4.1E-9 T 14-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 TMO_0693 13a45d0dd651ba2410f665ef6b09e949 304 SUPERFAMILY SSF54637 164 280 1.92E-28 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_0693 13a45d0dd651ba2410f665ef6b09e949 304 Gene3D G3DSA:3.10.129.10 162 293 3.9E-40 T 14-10-2018 TMO_0007 d7a3150ce1639beb52cb6018d56fe3b5 271 PIRSF PIRSF006157 4 271 1.3E-80 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 TMO_0007 d7a3150ce1639beb52cb6018d56fe3b5 271 SUPERFAMILY SSF53213 9 268 1.57E-78 T 14-10-2018 TMO_0007 d7a3150ce1639beb52cb6018d56fe3b5 271 Gene3D G3DSA:3.40.830.10 2 270 3.4E-82 T 14-10-2018 TMO_0007 d7a3150ce1639beb52cb6018d56fe3b5 271 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 12 250 6.2E-31 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 TMO_b0118 719bacab3dbe922d9ff072f898a9bfd7 180 Pfam PF00866 Ring hydroxylating beta subunit 28 172 1.7E-38 T 14-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 TMO_b0118 719bacab3dbe922d9ff072f898a9bfd7 180 SUPERFAMILY SSF54427 8 180 2.22E-40 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_b0118 719bacab3dbe922d9ff072f898a9bfd7 180 Gene3D G3DSA:3.10.450.50 5 180 1.5E-54 T 14-10-2018 TMO_2004 c741170c16e535e0f3dd6a1da4993ac8 237 SUPERFAMILY SSF53474 4 234 2.1E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2004 c741170c16e535e0f3dd6a1da4993ac8 237 Pfam PF12697 Alpha/beta hydrolase family 28 227 1.1E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2004 c741170c16e535e0f3dd6a1da4993ac8 237 Gene3D G3DSA:3.40.50.1820 2 236 1.3E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2004 c741170c16e535e0f3dd6a1da4993ac8 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 76 89 7.0E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2004 c741170c16e535e0f3dd6a1da4993ac8 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 178 192 7.0E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2004 c741170c16e535e0f3dd6a1da4993ac8 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 75 7.0E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2721 3b7ba45517e6bc3e02f4cd6cb5c10af2 229 Pfam PF01596 O-methyltransferase 37 224 4.7E-38 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 TMO_2721 3b7ba45517e6bc3e02f4cd6cb5c10af2 229 SUPERFAMILY SSF53335 37 225 9.82E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_2721 3b7ba45517e6bc3e02f4cd6cb5c10af2 229 Gene3D G3DSA:3.40.50.150 2 228 7.4E-69 T 14-10-2018 TMO_b0216 29c8558ce994c55ea71eae206199b964 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0216 29c8558ce994c55ea71eae206199b964 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 4.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0216 29c8558ce994c55ea71eae206199b964 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 4.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0216 29c8558ce994c55ea71eae206199b964 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0216 29c8558ce994c55ea71eae206199b964 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0216 29c8558ce994c55ea71eae206199b964 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 4.5E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0216 29c8558ce994c55ea71eae206199b964 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 3.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0216 29c8558ce994c55ea71eae206199b964 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 3.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0216 29c8558ce994c55ea71eae206199b964 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 3.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0216 29c8558ce994c55ea71eae206199b964 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 254 6.2E-51 T 14-10-2018 TMO_b0216 29c8558ce994c55ea71eae206199b964 256 SUPERFAMILY SSF51735 10 254 2.49E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0216 29c8558ce994c55ea71eae206199b964 256 Gene3D G3DSA:3.40.50.720 1 254 2.7E-70 T 14-10-2018 TMO_b0216 29c8558ce994c55ea71eae206199b964 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_b0101 7dd54d9e7dbce23a164e2e175837ea88 288 Gene3D G3DSA:1.10.3720.10 46 286 4.0E-52 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0101 7dd54d9e7dbce23a164e2e175837ea88 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 285 5.1E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0101 7dd54d9e7dbce23a164e2e175837ea88 288 SUPERFAMILY SSF161098 51 275 2.88E-50 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0529 474afd3ad3a6407b1241939d1d5a207e 435 PIRSF PIRSF006066 8 435 1.2E-75 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0529 474afd3ad3a6407b1241939d1d5a207e 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 426 7.5E-74 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_c0164 bade0fa2c921548ac987dc0b2a78ec4c 231 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 25 209 8.1E-49 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 TMO_c0164 bade0fa2c921548ac987dc0b2a78ec4c 231 Pfam PF00293 NUDIX domain 66 184 1.0E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_c0164 bade0fa2c921548ac987dc0b2a78ec4c 231 Gene3D G3DSA:3.90.79.10 14 221 2.0E-57 T 14-10-2018 TMO_c0164 bade0fa2c921548ac987dc0b2a78ec4c 231 ProSitePatterns PS00893 Nudix box signature. 109 130 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_c0164 bade0fa2c921548ac987dc0b2a78ec4c 231 SUPERFAMILY SSF55811 31 213 1.19E-40 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TMO_2401 fa04704005eb6b87fd6f840fc9e214d9 213 Gene3D G3DSA:1.10.10.10 29 103 1.2E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2401 fa04704005eb6b87fd6f840fc9e214d9 213 SUPERFAMILY SSF46785 33 88 1.05E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0492 f1cf3c0a032cd3b752f1e626674d1124 51 Gene3D G3DSA:3.10.129.10 1 51 6.2E-10 T 14-10-2018 TMO_a0492 f1cf3c0a032cd3b752f1e626674d1124 51 SUPERFAMILY SSF54637 1 48 2.15E-9 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_1815 39b0ddbe76ba6050742300b6b9748875 188 Pfam PF04355 SmpA / OmlA family 56 129 6.3E-16 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 TMO_1815 39b0ddbe76ba6050742300b6b9748875 188 Gene3D G3DSA:3.30.1450.10 56 144 5.4E-9 T 14-10-2018 IPR037873 BamE-like TMO_d0009 c75ae59fc8a157b4b755b8e510906a71 500 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 16 487 92.991 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_d0009 c75ae59fc8a157b4b755b8e510906a71 500 Gene3D G3DSA:3.90.1300.10 9 493 1.1E-189 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_d0009 c75ae59fc8a157b4b755b8e510906a71 500 ProSitePatterns PS00571 Amidases signature. 160 191 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TMO_d0009 c75ae59fc8a157b4b755b8e510906a71 500 PIRSF PIRSF001221 454 486 0.019 T 14-10-2018 TMO_d0009 c75ae59fc8a157b4b755b8e510906a71 500 PIRSF PIRSF001221 5 457 1.6E-43 T 14-10-2018 TMO_d0009 c75ae59fc8a157b4b755b8e510906a71 500 Pfam PF01425 Amidase 29 476 6.3E-154 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_d0009 c75ae59fc8a157b4b755b8e510906a71 500 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 18 485 4.0E-173 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_d0009 c75ae59fc8a157b4b755b8e510906a71 500 SUPERFAMILY SSF75304 9 489 7.19E-160 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_a0584 7ec3dc41ffa741ec8e5d00db8d65cd99 275 SUPERFAMILY SSF46689 67 147 6.16E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0584 7ec3dc41ffa741ec8e5d00db8d65cd99 275 SUPERFAMILY SSF48498 145 257 3.62E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_a0584 7ec3dc41ffa741ec8e5d00db8d65cd99 275 Gene3D G3DSA:1.10.357.10 120 256 2.4E-30 T 14-10-2018 TMO_a0584 7ec3dc41ffa741ec8e5d00db8d65cd99 275 Gene3D G3DSA:1.10.10.60 52 119 3.6E-14 T 14-10-2018 TMO_a0584 7ec3dc41ffa741ec8e5d00db8d65cd99 275 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 78 91 2.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0584 7ec3dc41ffa741ec8e5d00db8d65cd99 275 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 99 122 2.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0584 7ec3dc41ffa741ec8e5d00db8d65cd99 275 Pfam PF00440 Bacterial regulatory proteins, tetR family 78 121 3.9E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0151 0679dfafd8cd45fa055d4f3fb1e1388a 320 SUPERFAMILY SSF53850 29 250 1.15E-36 T 14-10-2018 TMO_b0151 0679dfafd8cd45fa055d4f3fb1e1388a 320 Pfam PF09084 NMT1/THI5 like 39 247 1.1E-18 T 14-10-2018 IPR015168 SsuA/THI5-like TMO_b0151 0679dfafd8cd45fa055d4f3fb1e1388a 320 Gene3D G3DSA:3.40.190.10 135 320 8.5E-25 T 14-10-2018 TMO_b0151 0679dfafd8cd45fa055d4f3fb1e1388a 320 SMART SM00062 31 253 0.0032 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_b0151 0679dfafd8cd45fa055d4f3fb1e1388a 320 Gene3D G3DSA:3.40.190.10 21 134 7.9E-15 T 14-10-2018 TMO_3305 60f8d7e760354cc997994251228fb7a9 284 Gene3D G3DSA:1.10.3720.10 6 277 6.7E-50 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3305 60f8d7e760354cc997994251228fb7a9 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 279 4.3E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3305 60f8d7e760354cc997994251228fb7a9 284 SUPERFAMILY SSF161098 8 280 2.09E-55 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2467 971b097e2071916867e6a7302a09edbc 309 SUPERFAMILY SSF56317 20 295 7.72E-56 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_2467 971b097e2071916867e6a7302a09edbc 309 Pfam PF00795 Carbon-nitrogen hydrolase 41 235 1.0E-23 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TMO_2467 971b097e2071916867e6a7302a09edbc 309 Gene3D G3DSA:3.60.110.10 20 305 1.5E-47 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TMO_c0721 d2ffeb50aaa3fba926bff71ce37668e7 573 SUPERFAMILY SSF55073 370 563 4.71E-41 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_c0721 d2ffeb50aaa3fba926bff71ce37668e7 573 Gene3D G3DSA:3.10.20.30 262 357 1.3E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_c0721 d2ffeb50aaa3fba926bff71ce37668e7 573 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 374 555 9.0E-20 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_c0721 d2ffeb50aaa3fba926bff71ce37668e7 573 Gene3D G3DSA:3.30.70.1230 365 570 4.0E-42 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_c0721 d2ffeb50aaa3fba926bff71ce37668e7 573 SUPERFAMILY SSF54292 265 352 1.5E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_c0721 d2ffeb50aaa3fba926bff71ce37668e7 573 Gene3D G3DSA:1.20.1300.10 8 100 2.5E-6 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_c0721 d2ffeb50aaa3fba926bff71ce37668e7 573 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 271 345 9.1E-8 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_c0721 d2ffeb50aaa3fba926bff71ce37668e7 573 SUPERFAMILY SSF81343 12 206 6.02E-21 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TMO_c0721 d2ffeb50aaa3fba926bff71ce37668e7 573 SMART SM00044 304 548 3.2E-5 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_a0390 aee84102a5570c1a9a51e67f7d5087c2 340 SUPERFAMILY SSF56112 8 337 7.82E-56 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_a0390 aee84102a5570c1a9a51e67f7d5087c2 340 Gene3D G3DSA:3.90.1200.10 111 340 2.4E-90 T 14-10-2018 TMO_a0390 aee84102a5570c1a9a51e67f7d5087c2 340 Pfam PF01636 Phosphotransferase enzyme family 32 256 4.7E-54 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase TMO_a0390 aee84102a5570c1a9a51e67f7d5087c2 340 Gene3D G3DSA:3.30.200.20 10 110 2.4E-34 T 14-10-2018 TMO_1794 d13e085604cafa031a964fbbfc5803da 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 22 171 2.9E-31 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_1794 d13e085604cafa031a964fbbfc5803da 201 Gene3D G3DSA:3.40.50.1240 18 195 2.6E-38 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_1794 d13e085604cafa031a964fbbfc5803da 201 SMART SM00855 21 165 2.8E-18 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_1794 d13e085604cafa031a964fbbfc5803da 201 SUPERFAMILY SSF53254 21 197 2.57E-38 T 14-10-2018 IPR029033 Histidine phosphatase superfamily TMO_0971 397e267402cbdc85c668882f16258127 124 SUPERFAMILY SSF52821 15 114 1.06E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_0971 397e267402cbdc85c668882f16258127 124 SMART SM00450 15 110 5.6E-20 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_0971 397e267402cbdc85c668882f16258127 124 Gene3D G3DSA:3.40.250.10 9 114 5.1E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily TMO_0971 397e267402cbdc85c668882f16258127 124 Pfam PF00581 Rhodanese-like domain 16 106 3.5E-14 T 14-10-2018 IPR001763 Rhodanese-like domain TMO_3223 cb2b9048da9cda3f934cf3c06f56879f 501 Pfam PF16347 Domain of unknown function (DUF4976) 375 481 2.3E-7 T 14-10-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 TMO_3223 cb2b9048da9cda3f934cf3c06f56879f 501 SUPERFAMILY SSF53649 4 482 1.44E-96 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TMO_3223 cb2b9048da9cda3f934cf3c06f56879f 501 Gene3D G3DSA:3.40.720.10 3 501 3.7E-127 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TMO_3223 cb2b9048da9cda3f934cf3c06f56879f 501 Pfam PF00884 Sulfatase 3 372 2.3E-53 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TMO_b0233 3919a79cac42c7737139d2dda514a072 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 2.2E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0233 3919a79cac42c7737139d2dda514a072 232 Gene3D G3DSA:1.10.357.10 4 194 4.5E-30 T 14-10-2018 TMO_b0233 3919a79cac42c7737139d2dda514a072 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 6.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0233 3919a79cac42c7737139d2dda514a072 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 6.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0233 3919a79cac42c7737139d2dda514a072 232 SUPERFAMILY SSF48498 93 178 2.03E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_b0233 3919a79cac42c7737139d2dda514a072 232 SUPERFAMILY SSF46689 3 86 1.4E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1267 2355c18b81b85f3788991f22a42c6bdc 408 Gene3D G3DSA:3.20.20.70 113 366 1.5E-18 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1267 2355c18b81b85f3788991f22a42c6bdc 408 TIGRFAM TIGR03977 rSAM_pair_HxsC: His-Xaa-Ser system radical SAM maturase HxsC 89 378 2.3E-112 T 14-10-2018 IPR024032 His-Xaa-Ser system radical SAM maturase HxsC TMO_1267 2355c18b81b85f3788991f22a42c6bdc 408 Pfam PF13353 4Fe-4S single cluster domain 115 200 8.0E-5 T 14-10-2018 TMO_1267 2355c18b81b85f3788991f22a42c6bdc 408 SUPERFAMILY SSF102114 117 374 5.3E-22 T 14-10-2018 TMO_3287 0a5328921315f7962b4a4fb266474636 290 SUPERFAMILY SSF63829 52 252 1.11E-7 T 14-10-2018 TMO_1428 6710ea6116cfac2517495296c17d6d65 168 Pfam PF08882 Acetone carboxylase gamma subunit 47 158 6.6E-53 T 14-10-2018 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit TMO_1428 6710ea6116cfac2517495296c17d6d65 168 PIRSF PIRSF019217 1 167 1.2E-74 T 14-10-2018 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit TMO_a0005 db5c960145d2eb97b03a15aac7e68e2c 97 Gene3D G3DSA:3.30.2310.20 1 97 6.7E-20 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_a0005 db5c960145d2eb97b03a15aac7e68e2c 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 92 3.6E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_b0482 ce1c0fd17a24694f851df3c856f520c2 407 Pfam PF14907 Uncharacterised nucleotidyltransferase 42 294 1.3E-46 T 14-10-2018 IPR039498 Uncharacterised nucleotidyltransferase TMO_c0186 b9c44d079f7c3a08f240c54cb2375c6f 343 Gene3D G3DSA:3.40.50.300 151 338 1.1E-7 T 14-10-2018 TMO_c0186 b9c44d079f7c3a08f240c54cb2375c6f 343 SUPERFAMILY SSF52540 86 289 1.02E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3119 bc141c5e042d8c396921361523f51fb3 342 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 33 327 5.3E-39 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD TMO_2106 154e4226acbf9e1076836f75ce756d28 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 1 60 4.6E-16 T 14-10-2018 IPR022789 Antitoxin ParD TMO_2106 154e4226acbf9e1076836f75ce756d28 80 SUPERFAMILY SSF47598 3 41 2.89E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_2106 154e4226acbf9e1076836f75ce756d28 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 4 71 9.2E-8 T 14-10-2018 IPR022789 Antitoxin ParD TMO_2106 154e4226acbf9e1076836f75ce756d28 80 Gene3D G3DSA:1.10.8.1250 8 80 1.9E-13 T 14-10-2018 IPR038296 Antitoxin ParD superfamily TMO_1665 cec8651092d63120788098605cbdc754 410 SUPERFAMILY SSF161098 193 393 5.23E-31 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1665 cec8651092d63120788098605cbdc754 410 Gene3D G3DSA:1.10.3720.10 194 403 3.4E-26 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1665 cec8651092d63120788098605cbdc754 410 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 219 405 6.8E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_0408 ba9b60ce0dc28fb10ae09fb9243bbfa7 660 Pfam PF05170 AsmA family 3 206 1.6E-23 T 14-10-2018 IPR007844 AsmA TMO_0408 ba9b60ce0dc28fb10ae09fb9243bbfa7 660 Pfam PF05170 AsmA family 310 558 1.6E-26 T 14-10-2018 IPR007844 AsmA TMO_a0419 7f6c5d8e8b97ee0a33ca5cbade19ab86 406 Pfam PF13458 Periplasmic binding protein 40 373 2.0E-65 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_a0419 7f6c5d8e8b97ee0a33ca5cbade19ab86 406 Gene3D G3DSA:3.40.50.2300 154 375 3.4E-108 T 14-10-2018 TMO_a0419 7f6c5d8e8b97ee0a33ca5cbade19ab86 406 SUPERFAMILY SSF53822 44 381 1.08E-72 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_a0419 7f6c5d8e8b97ee0a33ca5cbade19ab86 406 Gene3D G3DSA:3.40.50.2300 60 367 3.4E-108 T 14-10-2018 TMO_2529 552fe62cad6434fe8625c45d2582f5f1 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_2529 552fe62cad6434fe8625c45d2582f5f1 260 Gene3D G3DSA:3.90.226.10 5 259 1.5E-74 T 14-10-2018 TMO_2529 552fe62cad6434fe8625c45d2582f5f1 260 SUPERFAMILY SSF52096 7 259 4.32E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_2529 552fe62cad6434fe8625c45d2582f5f1 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 257 4.0E-56 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_2843 57f8a89bbb7967f53e22141375755631 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 280 1.7E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2843 57f8a89bbb7967f53e22141375755631 284 SUPERFAMILY SSF161098 4 276 1.96E-56 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2843 57f8a89bbb7967f53e22141375755631 284 Gene3D G3DSA:1.10.3720.10 9 280 2.2E-56 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2129 f1968e10224ced3e64b52b2ed8b1a686 243 Gene3D G3DSA:1.10.10.10 19 86 3.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2129 f1968e10224ced3e64b52b2ed8b1a686 243 SUPERFAMILY SSF46785 18 89 1.23E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_2129 f1968e10224ced3e64b52b2ed8b1a686 243 SUPERFAMILY SSF48008 92 231 5.75E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_2129 f1968e10224ced3e64b52b2ed8b1a686 243 Pfam PF07729 FCD domain 95 225 2.8E-19 T 14-10-2018 IPR011711 GntR, C-terminal TMO_2129 f1968e10224ced3e64b52b2ed8b1a686 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 85 1.4E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_2129 f1968e10224ced3e64b52b2ed8b1a686 243 Gene3D G3DSA:1.20.120.530 88 235 4.0E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_2129 f1968e10224ced3e64b52b2ed8b1a686 243 SMART SM00895 95 226 1.2E-11 T 14-10-2018 IPR011711 GntR, C-terminal TMO_2129 f1968e10224ced3e64b52b2ed8b1a686 243 SMART SM00345 27 85 8.4E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_3335 ffbf1175cd0649c555a1b722667a6483 216 Pfam PF00005 ABC transporter 21 163 3.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_3335 ffbf1175cd0649c555a1b722667a6483 216 SMART SM00382 27 212 5.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_3335 ffbf1175cd0649c555a1b722667a6483 216 Gene3D G3DSA:3.40.50.300 1 214 1.6E-52 T 14-10-2018 TMO_3335 ffbf1175cd0649c555a1b722667a6483 216 SUPERFAMILY SSF52540 4 210 2.05E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2364 958a053afabd3714d01440a6e730bc57 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2364 958a053afabd3714d01440a6e730bc57 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2364 958a053afabd3714d01440a6e730bc57 200 SUPERFAMILY SSF46689 9 91 3.39E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2364 958a053afabd3714d01440a6e730bc57 200 Gene3D G3DSA:1.10.357.10 6 199 6.9E-43 T 14-10-2018 TMO_2364 958a053afabd3714d01440a6e730bc57 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 9.4E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1378 6f6df25ea771240d94a8700a516eba03 346 Gene3D G3DSA:3.90.1200.10 113 345 1.4E-81 T 14-10-2018 TMO_1378 6f6df25ea771240d94a8700a516eba03 346 SUPERFAMILY SSF56112 15 332 1.06E-57 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_1378 6f6df25ea771240d94a8700a516eba03 346 Pfam PF01636 Phosphotransferase enzyme family 34 255 6.0E-50 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase TMO_1378 6f6df25ea771240d94a8700a516eba03 346 Gene3D G3DSA:3.30.200.20 14 112 2.3E-36 T 14-10-2018 TMO_0829 4d8f994768609ee3ccb453badaae359e 467 Gene3D G3DSA:3.40.50.1220 289 465 7.5E-85 T 14-10-2018 TMO_0829 4d8f994768609ee3ccb453badaae359e 467 SUPERFAMILY SSF52467 292 466 1.82E-76 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TMO_0829 4d8f994768609ee3ccb453badaae359e 467 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 462 2.1E-199 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 TMO_0829 4d8f994768609ee3ccb453badaae359e 467 PIRSF PIRSF000204 1 466 1.1E-221 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 TMO_a0345 4255b7725d251e5e31ef08f07ad6e7f7 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 269 306 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_a0345 4255b7725d251e5e31ef08f07ad6e7f7 459 Gene3D G3DSA:3.40.640.10 81 361 1.2E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_a0345 4255b7725d251e5e31ef08f07ad6e7f7 459 Pfam PF00202 Aminotransferase class-III 49 455 5.7E-101 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_a0345 4255b7725d251e5e31ef08f07ad6e7f7 459 PIRSF PIRSF000521 48 458 6.8E-29 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_a0345 4255b7725d251e5e31ef08f07ad6e7f7 459 Gene3D G3DSA:3.90.1150.10 44 450 1.2E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_a0345 4255b7725d251e5e31ef08f07ad6e7f7 459 SUPERFAMILY SSF53383 31 457 7.59E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_3553 672f4627f5b510cdd194cf71a72ee3b2 151 SUPERFAMILY SSF75169 10 142 1.33E-11 T 14-10-2018 IPR027396 DsrEFH-like TMO_3553 672f4627f5b510cdd194cf71a72ee3b2 151 Pfam PF02635 DsrE/DsrF-like family 21 149 3.9E-7 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TMO_3553 672f4627f5b510cdd194cf71a72ee3b2 151 Gene3D G3DSA:3.40.1260.10 3 140 1.1E-11 T 14-10-2018 IPR027396 DsrEFH-like TMO_1036 a5a99656b0ff3a157ccf93b83858e994 193 Gene3D G3DSA:1.25.40.10 6 184 6.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3173 bce353af7c76aa6cb8376adbc95662bd 236 SUPERFAMILY SSF89562 27 193 6.02E-43 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily TMO_3173 bce353af7c76aa6cb8376adbc95662bd 236 Pfam PF03737 Aldolase/RraA 29 182 1.0E-37 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein TMO_3173 bce353af7c76aa6cb8376adbc95662bd 236 Gene3D G3DSA:3.50.30.100 1 206 6.1E-58 T 14-10-2018 TMO_2446 8a9095793cc0eda322115ea3f7aaa853 418 SUPERFAMILY SSF48208 67 368 1.09E-5 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TMO_3151 5f97270343b60c6f7624ad8803d2ab43 179 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 166 4.7E-57 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 TMO_3151 5f97270343b60c6f7624ad8803d2ab43 179 SUPERFAMILY SSF52540 2 168 3.54E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3151 5f97270343b60c6f7624ad8803d2ab43 179 PIRSF PIRSF006135 1 170 4.7E-50 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 TMO_3151 5f97270343b60c6f7624ad8803d2ab43 179 Gene3D G3DSA:3.40.50.300 2 168 2.6E-54 T 14-10-2018 TMO_0179 0f247900a3b70cc0fe06a821449a5467 213 Pfam PF03968 OstA-like protein 60 192 1.7E-16 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal TMO_0179 0f247900a3b70cc0fe06a821449a5467 213 Gene3D G3DSA:2.60.450.10 46 207 1.5E-21 T 14-10-2018 TMO_a0344 05f26b6cde99151ae39eeda6d3c989be 373 Gene3D G3DSA:3.60.60.10 5 350 1.7E-84 T 14-10-2018 TMO_a0344 05f26b6cde99151ae39eeda6d3c989be 373 Gene3D G3DSA:1.10.10.2120 19 91 1.7E-84 T 14-10-2018 TMO_a0344 05f26b6cde99151ae39eeda6d3c989be 373 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 127 349 7.0E-17 T 14-10-2018 IPR005079 Peptidase C45 TMO_b0243 6af9a44ab5457d6d85e467bdc899e524 413 Gene3D G3DSA:1.10.540.10 14 131 8.1E-27 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TMO_b0243 6af9a44ab5457d6d85e467bdc899e524 413 Gene3D G3DSA:2.40.110.10 137 247 1.6E-38 T 14-10-2018 TMO_b0243 6af9a44ab5457d6d85e467bdc899e524 413 SUPERFAMILY SSF56645 13 257 5.76E-76 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TMO_b0243 6af9a44ab5457d6d85e467bdc899e524 413 Gene3D G3DSA:1.20.140.10 248 413 1.4E-34 T 14-10-2018 TMO_b0243 6af9a44ab5457d6d85e467bdc899e524 413 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 18 131 2.1E-20 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TMO_b0243 6af9a44ab5457d6d85e467bdc899e524 413 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 232 1.5E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TMO_b0243 6af9a44ab5457d6d85e467bdc899e524 413 SUPERFAMILY SSF47203 244 413 9.83E-21 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TMO_b0243 6af9a44ab5457d6d85e467bdc899e524 413 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 410 1.4E-20 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_a0056 bc96d33c1f346c3e71452f33e6fa2908 286 PRINTS PR00377 Inositol monophosphatase superfamily signature 94 110 6.2E-29 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_a0056 bc96d33c1f346c3e71452f33e6fa2908 286 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 6.2E-29 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_a0056 bc96d33c1f346c3e71452f33e6fa2908 286 PRINTS PR00377 Inositol monophosphatase superfamily signature 51 71 6.2E-29 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_a0056 bc96d33c1f346c3e71452f33e6fa2908 286 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 6.2E-29 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_a0056 bc96d33c1f346c3e71452f33e6fa2908 286 PRINTS PR00377 Inositol monophosphatase superfamily signature 73 89 6.2E-29 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_a0056 bc96d33c1f346c3e71452f33e6fa2908 286 Gene3D G3DSA:3.30.540.10 6 152 4.3E-35 T 14-10-2018 TMO_a0056 bc96d33c1f346c3e71452f33e6fa2908 286 SUPERFAMILY SSF56655 9 233 6.02E-52 T 14-10-2018 TMO_a0056 bc96d33c1f346c3e71452f33e6fa2908 286 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 94 107 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site TMO_a0056 bc96d33c1f346c3e71452f33e6fa2908 286 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 TMO_a0056 bc96d33c1f346c3e71452f33e6fa2908 286 Pfam PF00459 Inositol monophosphatase family 12 235 7.5E-43 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_a0056 bc96d33c1f346c3e71452f33e6fa2908 286 Gene3D G3DSA:3.40.190.80 153 248 2.4E-14 T 14-10-2018 TMO_2748 bf89798caa3776073d6fe7d49b96d4e2 463 SUPERFAMILY SSF48452 88 223 4.41E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_0173 c9d56cf027a3275a51263b0b443b6a37 314 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 18 300 40.79 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 TMO_0173 c9d56cf027a3275a51263b0b443b6a37 314 Pfam PF03668 P-loop ATPase protein family 20 298 1.4E-86 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 TMO_0173 c9d56cf027a3275a51263b0b443b6a37 314 SUPERFAMILY SSF52540 17 170 3.09E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0173 c9d56cf027a3275a51263b0b443b6a37 314 Gene3D G3DSA:3.40.50.300 17 170 3.8E-5 T 14-10-2018 TMO_0173 c9d56cf027a3275a51263b0b443b6a37 314 PIRSF PIRSF005052 18 302 1.0E-96 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 TMO_b0105 b26f1341669b6efe2f1876e8396acdab 413 Pfam PF06114 IrrE N-terminal-like domain 302 403 5.3E-6 T 14-10-2018 IPR010359 IrrE N-terminal-like domain TMO_2204 6f8f01ebec09c5b5df28feab7a225fcd 357 Pfam PF10134 Replication initiator protein A 27 256 2.6E-93 T 14-10-2018 IPR018777 Replication initiator protein A TMO_2849 916c41f3bfa08152601c1ebb490ad1d9 279 SUPERFAMILY SSF161098 69 258 1.22E-26 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2849 916c41f3bfa08152601c1ebb490ad1d9 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 274 1.1E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2849 916c41f3bfa08152601c1ebb490ad1d9 279 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 4 39 2.9E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_2849 916c41f3bfa08152601c1ebb490ad1d9 279 Gene3D G3DSA:1.10.3720.10 65 276 1.3E-19 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0336 a2268722cab89d6874cab4d9c016d43d 335 SUPERFAMILY SSF52540 46 292 1.74E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0336 a2268722cab89d6874cab4d9c016d43d 335 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 17 48 3.0E-19 T 14-10-2018 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 TMO_0336 a2268722cab89d6874cab4d9c016d43d 335 Gene3D G3DSA:3.40.50.300 58 238 1.6E-23 T 14-10-2018 TMO_0336 a2268722cab89d6874cab4d9c016d43d 335 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 18 326 1.7E-173 T 14-10-2018 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 TMO_0336 a2268722cab89d6874cab4d9c016d43d 335 Pfam PF07728 AAA domain (dynein-related subfamily) 75 197 5.4E-12 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TMO_2830 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 96 112 2.2E-23 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2830 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 184 205 2.2E-23 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2830 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 216 240 2.2E-23 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2830 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 145 168 2.2E-23 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2830 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 52 72 2.2E-23 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2830 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 74 90 2.2E-23 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2830 f967049c4aaf6e2963af53e4790ee8f7 288 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 219 233 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 TMO_2830 f967049c4aaf6e2963af53e4790ee8f7 288 Pfam PF00459 Inositol monophosphatase family 27 269 5.0E-47 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TMO_2830 f967049c4aaf6e2963af53e4790ee8f7 288 Gene3D G3DSA:3.40.190.80 170 271 1.4E-22 T 14-10-2018 TMO_2830 f967049c4aaf6e2963af53e4790ee8f7 288 SUPERFAMILY SSF56655 19 271 1.31E-66 T 14-10-2018 TMO_2830 f967049c4aaf6e2963af53e4790ee8f7 288 Gene3D G3DSA:3.30.540.10 17 153 3.7E-36 T 14-10-2018 TMO_3513 14be2170e9fd366b25043102a335c198 303 Pfam PF01925 Sulfite exporter TauE/SafE 18 282 3.3E-48 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_1749 6d08ed89018938ab133c140d190f7bb8 141 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 1.2E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TMO_1749 6d08ed89018938ab133c140d190f7bb8 141 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.2E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TMO_1749 6d08ed89018938ab133c140d190f7bb8 141 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.2E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TMO_1749 6d08ed89018938ab133c140d190f7bb8 141 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 5.1E-20 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TMO_1749 6d08ed89018938ab133c140d190f7bb8 141 Pfam PF03840 Preprotein translocase SecG subunit 4 72 2.2E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TMO_2110 f352d3ebf002935d83ed710c61c9ffab 501 SMART SM00052 253 498 2.7E-77 T 14-10-2018 IPR001633 EAL domain TMO_2110 f352d3ebf002935d83ed710c61c9ffab 501 Pfam PF00563 EAL domain 260 493 9.4E-61 T 14-10-2018 IPR001633 EAL domain TMO_2110 f352d3ebf002935d83ed710c61c9ffab 501 Pfam PF12792 CSS motif domain associated with EAL 30 220 2.6E-28 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain TMO_2110 f352d3ebf002935d83ed710c61c9ffab 501 Gene3D G3DSA:3.20.20.450 255 501 8.7E-75 T 14-10-2018 IPR035919 EAL domain superfamily TMO_2110 f352d3ebf002935d83ed710c61c9ffab 501 SUPERFAMILY SSF141868 258 500 1.7E-69 T 14-10-2018 IPR035919 EAL domain superfamily TMO_1427 9f53a303a0a238626d3d2a75bf6041d0 306 Pfam PF00892 EamA-like transporter family 22 153 1.9E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1427 9f53a303a0a238626d3d2a75bf6041d0 306 Pfam PF00892 EamA-like transporter family 168 303 2.5E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_1427 9f53a303a0a238626d3d2a75bf6041d0 306 SUPERFAMILY SSF103481 205 306 1.31E-8 T 14-10-2018 TMO_1427 9f53a303a0a238626d3d2a75bf6041d0 306 SUPERFAMILY SSF103481 56 155 4.05E-10 T 14-10-2018 TMO_1304 4ff9972e96a6aa2e8e09fa6690398f8a 521 Pfam PF03929 PepSY-associated TM region 10 370 4.7E-63 T 14-10-2018 IPR005625 PepSY-associated TM protein TMO_2280 3668384cf5d74920d06c4edfbcac503e 253 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 233 4.5E-101 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO TMO_2280 3668384cf5d74920d06c4edfbcac503e 253 Gene3D G3DSA:1.10.760.10 43 233 1.5E-64 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_2280 3668384cf5d74920d06c4edfbcac503e 253 SUPERFAMILY SSF46626 17 223 9.26E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_2280 3668384cf5d74920d06c4edfbcac503e 253 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 6 229 1.2E-94 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO TMO_3026 197e63c2f9d82556b7e58949c6e9eea9 286 SUPERFAMILY SSF51735 6 157 3.25E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_3026 197e63c2f9d82556b7e58949c6e9eea9 286 SUPERFAMILY SSF55347 132 242 2.62E-21 T 14-10-2018 TMO_3026 197e63c2f9d82556b7e58949c6e9eea9 286 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 137 265 2.0E-14 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_3026 197e63c2f9d82556b7e58949c6e9eea9 286 Gene3D G3DSA:3.40.50.720 8 262 1.1E-51 T 14-10-2018 TMO_3026 197e63c2f9d82556b7e58949c6e9eea9 286 PIRSF PIRSF000161 5 277 2.4E-41 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_3026 197e63c2f9d82556b7e58949c6e9eea9 286 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 7 271 1.8E-41 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_3026 197e63c2f9d82556b7e58949c6e9eea9 286 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 8 131 1.8E-22 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TMO_3026 197e63c2f9d82556b7e58949c6e9eea9 286 Gene3D G3DSA:3.30.360.10 133 243 1.1E-51 T 14-10-2018 TMO_0685 199ef5911192e496261a190e26ca06ad 225 Gene3D G3DSA:2.40.360.10 30 224 5.2E-38 T 14-10-2018 IPR023373 YmcC-like superfamily TMO_0685 199ef5911192e496261a190e26ca06ad 225 SUPERFAMILY SSF159270 32 221 8.24E-35 T 14-10-2018 IPR023373 YmcC-like superfamily TMO_0685 199ef5911192e496261a190e26ca06ad 225 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 20 219 5.4E-49 T 14-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB TMO_2270 9e6532507ae23f0b9d21d7bea4803ad9 247 Gene3D G3DSA:1.10.357.10 8 202 8.6E-20 T 14-10-2018 TMO_2270 9e6532507ae23f0b9d21d7bea4803ad9 247 SUPERFAMILY SSF46689 8 80 3.04E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_2270 9e6532507ae23f0b9d21d7bea4803ad9 247 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 9.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0046 1f4a75139b0e305f33a902720294f076 116 SUPERFAMILY SSF50475 15 114 2.51E-17 T 14-10-2018 TMO_b0046 1f4a75139b0e305f33a902720294f076 116 Pfam PF04299 Putative FMN-binding domain 1 114 3.1E-28 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type TMO_b0046 1f4a75139b0e305f33a902720294f076 116 Gene3D G3DSA:2.30.110.10 1 116 5.6E-30 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_c0016 b76e3d4675b4cc3d0a9de2c5d78f7e9c 156 Gene3D G3DSA:3.10.180.10 1 120 1.2E-45 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_c0016 b76e3d4675b4cc3d0a9de2c5d78f7e9c 156 SUPERFAMILY SSF54593 2 119 3.89E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_1717 a933a88aefa5cfc8ef32bb22b828180a 340 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 24 337 1.6E-150 T 14-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 TMO_1717 a933a88aefa5cfc8ef32bb22b828180a 340 Pfam PF00676 Dehydrogenase E1 component 32 329 1.2E-101 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 TMO_1717 a933a88aefa5cfc8ef32bb22b828180a 340 SUPERFAMILY SSF52518 18 339 5.4E-104 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold TMO_1717 a933a88aefa5cfc8ef32bb22b828180a 340 Gene3D G3DSA:3.40.50.970 3 340 6.7E-130 T 14-10-2018 TMO_3331 6388615972a7d475e0669f2204f524b6 483 Pfam PF02386 Cation transport protein 46 477 5.7E-56 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 TMO_3331 6388615972a7d475e0669f2204f524b6 483 PIRSF PIRSF006247 1 483 1.8E-165 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 TMO_0719 d2618a0e4efbf58abc423944cec8840e 89 Gene3D G3DSA:3.30.420.470 1 79 1.0E-8 T 14-10-2018 TMO_0719 d2618a0e4efbf58abc423944cec8840e 89 Pfam PF13358 DDE superfamily endonuclease 1 59 6.7E-12 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain TMO_c0544 7016dc3c07c551c33757c87e898cad8e 208 SUPERFAMILY SSF46689 13 87 4.16E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0544 7016dc3c07c551c33757c87e898cad8e 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 5.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0544 7016dc3c07c551c33757c87e898cad8e 208 Gene3D G3DSA:1.10.357.10 8 204 6.9E-26 T 14-10-2018 TMO_c0544 7016dc3c07c551c33757c87e898cad8e 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 3.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0544 7016dc3c07c551c33757c87e898cad8e 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 3.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1950 1591ac6a732d323436cc01936a684f4e 227 Pfam PF00005 ABC transporter 25 173 4.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1950 1591ac6a732d323436cc01936a684f4e 227 SMART SM00382 34 222 4.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1950 1591ac6a732d323436cc01936a684f4e 227 Gene3D G3DSA:3.40.50.300 4 226 7.3E-62 T 14-10-2018 TMO_1950 1591ac6a732d323436cc01936a684f4e 227 SUPERFAMILY SSF52540 6 224 2.28E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1950 1591ac6a732d323436cc01936a684f4e 227 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0360 b43ab1166e2f5a4ba99363839c286cf5 540 Gene3D G3DSA:3.40.50.150 202 493 1.7E-86 T 14-10-2018 TMO_a0360 b43ab1166e2f5a4ba99363839c286cf5 540 SUPERFAMILY SSF53335 8 534 5.87E-132 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_a0360 b43ab1166e2f5a4ba99363839c286cf5 540 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 320 326 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TMO_a0360 b43ab1166e2f5a4ba99363839c286cf5 540 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 7 516 5.3E-117 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 TMO_a0360 b43ab1166e2f5a4ba99363839c286cf5 540 Pfam PF02384 N-6 DNA Methylase 181 496 1.2E-100 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TMO_a0360 b43ab1166e2f5a4ba99363839c286cf5 540 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 204 220 5.5E-20 T 14-10-2018 TMO_a0360 b43ab1166e2f5a4ba99363839c286cf5 540 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 352 376 5.5E-20 T 14-10-2018 TMO_a0360 b43ab1166e2f5a4ba99363839c286cf5 540 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 317 329 5.5E-20 T 14-10-2018 TMO_a0360 b43ab1166e2f5a4ba99363839c286cf5 540 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 238 252 5.5E-20 T 14-10-2018 TMO_a0360 b43ab1166e2f5a4ba99363839c286cf5 540 Gene3D G3DSA:1.20.1260.30 1 197 2.5E-48 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TMO_a0360 b43ab1166e2f5a4ba99363839c286cf5 540 Pfam PF12161 HsdM N-terminal domain 9 170 9.0E-27 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TMO_b0564 842c5af5ac2f4e41455ae4cea54081a9 288 Gene3D G3DSA:3.20.20.370 1 286 5.0E-77 T 14-10-2018 TMO_b0564 842c5af5ac2f4e41455ae4cea54081a9 288 SUPERFAMILY SSF88713 3 285 3.34E-74 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_b0564 842c5af5ac2f4e41455ae4cea54081a9 288 Pfam PF01522 Polysaccharide deacetylase 57 151 1.6E-15 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 TMO_c0412 27c0122ecb498cd56f24213fdb4fd1c3 319 SUPERFAMILY SSF53474 20 311 2.29E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0412 27c0122ecb498cd56f24213fdb4fd1c3 319 Gene3D G3DSA:3.40.50.1820 12 316 4.6E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0412 27c0122ecb498cd56f24213fdb4fd1c3 319 Pfam PF12697 Alpha/beta hydrolase family 41 303 9.2E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0873 61c4124636c163a2c808e5ee24aac7ff 213 Gene3D G3DSA:2.40.128.270 94 201 3.1E-14 T 14-10-2018 IPR038670 HslJ-like superfamily TMO_c0873 61c4124636c163a2c808e5ee24aac7ff 213 Pfam PF03724 META domain 103 194 1.2E-19 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ TMO_0012 81958694f1777ec2eb4d77e1edd60efa 405 Gene3D G3DSA:3.20.20.140 15 388 7.7E-68 T 14-10-2018 TMO_0012 81958694f1777ec2eb4d77e1edd60efa 405 Pfam PF04909 Amidohydrolase 137 389 4.7E-23 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_0012 81958694f1777ec2eb4d77e1edd60efa 405 SUPERFAMILY SSF51556 21 389 9.43E-56 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_b0596 7d3538b0eaf8434607f1801748642581 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0596 7d3538b0eaf8434607f1801748642581 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0596 7d3538b0eaf8434607f1801748642581 233 SUPERFAMILY SSF46689 2 63 6.67E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0596 7d3538b0eaf8434607f1801748642581 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 1.4E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0596 7d3538b0eaf8434607f1801748642581 233 Gene3D G3DSA:1.10.10.60 2 57 9.0E-14 T 14-10-2018 TMO_b0596 7d3538b0eaf8434607f1801748642581 233 Gene3D G3DSA:1.10.357.10 78 222 6.2E-6 T 14-10-2018 TMO_2332 ac4e655383b66a192c491ee9e09105e0 83 SUPERFAMILY SSF143120 4 52 8.89E-11 T 14-10-2018 IPR036165 YefM-like superfamily TMO_2332 ac4e655383b66a192c491ee9e09105e0 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 52 9.3E-11 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TMO_2332 ac4e655383b66a192c491ee9e09105e0 83 Gene3D G3DSA:3.40.1620.40 2 51 7.9E-7 T 14-10-2018 TMO_2332 ac4e655383b66a192c491ee9e09105e0 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 23 51 1.2E-6 T 14-10-2018 TMO_c0398 c854e882d99242f12d6c97e840feef02 188 Pfam PF06127 Protein of unknown function (DUF962) 14 158 1.6E-23 T 14-10-2018 IPR009305 Protein of unknown function DUF962 TMO_b0527 fb4cff2de44edcf8b46772eb32e6c6f9 382 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 321 3.8E-30 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_b0527 fb4cff2de44edcf8b46772eb32e6c6f9 382 Gene3D G3DSA:3.40.190.170 27 349 1.8E-67 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_3324 03c84e6c53a7e43dedbf9724a651606d 275 Gene3D G3DSA:3.20.20.190 8 253 5.6E-42 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TMO_3324 03c84e6c53a7e43dedbf9724a651606d 275 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 16 248 2.4E-21 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 TMO_3324 03c84e6c53a7e43dedbf9724a651606d 275 SUPERFAMILY SSF51695 12 251 4.19E-41 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TMO_1561 560276a6f73abb5a512315d7a07e78f3 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 285 3.4E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1561 560276a6f73abb5a512315d7a07e78f3 298 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 32 286 7.8E-84 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 TMO_1561 560276a6f73abb5a512315d7a07e78f3 298 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 30 287 2.8E-113 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 TMO_1561 560276a6f73abb5a512315d7a07e78f3 298 Gene3D G3DSA:1.10.3720.10 30 291 1.3E-54 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1561 560276a6f73abb5a512315d7a07e78f3 298 SUPERFAMILY SSF161098 27 278 4.97E-49 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2835 161350aa6fffbe9a7bb9d039a0970bd5 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 32 304 1.3E-46 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 TMO_2384 e75245afbcbca8c49fff8191c8348b7a 175 Pfam PF11985 Protein of unknown function (DUF3486) 1 173 7.5E-40 T 14-10-2018 IPR021874 Bacteriophage Mu, Gp27 TMO_0241 3feccab9dd240e921f25493d9ae5ef8b 193 Gene3D G3DSA:3.40.50.450 1 193 1.2E-78 T 14-10-2018 TMO_0241 3feccab9dd240e921f25493d9ae5ef8b 193 Pfam PF03641 Possible lysine decarboxylase 46 174 2.5E-41 T 14-10-2018 IPR031100 LOG family TMO_0241 3feccab9dd240e921f25493d9ae5ef8b 193 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 4 179 2.9E-63 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG TMO_0241 3feccab9dd240e921f25493d9ae5ef8b 193 SUPERFAMILY SSF102405 2 178 1.05E-61 T 14-10-2018 TMO_3511 1a7855a8cef946576735b524861fa616 208 Pfam PF01810 LysE type translocator 16 203 3.2E-30 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_3511 1a7855a8cef946576735b524861fa616 208 PIRSF PIRSF006324 1 207 1.2E-53 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_a0539 17d3183dfa665e59274d848b466fa11c 335 Gene3D G3DSA:3.40.190.170 31 331 9.3E-77 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_a0539 17d3183dfa665e59274d848b466fa11c 335 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 311 2.8E-42 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_1416 badbf94e8e635643a054a941b4d8052e 219 Gene3D G3DSA:3.40.109.10 1 211 8.0E-67 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TMO_1416 badbf94e8e635643a054a941b4d8052e 219 Pfam PF00881 Nitroreductase family 2 191 2.9E-37 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TMO_1416 badbf94e8e635643a054a941b4d8052e 219 SUPERFAMILY SSF55469 2 214 8.25E-47 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TMO_c0838 387d86dec9da69ade04469d9e73b5f01 316 SUPERFAMILY SSF51430 1 314 6.42E-94 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_c0838 387d86dec9da69ade04469d9e73b5f01 316 Pfam PF00248 Aldo/keto reductase family 15 314 2.0E-71 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_c0838 387d86dec9da69ade04469d9e73b5f01 316 Gene3D G3DSA:3.20.20.100 1 316 7.9E-101 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_1894 61bc2855f9c1104d673e829cb518b924 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 31 210 1.4E-54 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like TMO_1894 61bc2855f9c1104d673e829cb518b924 216 Gene3D G3DSA:2.60.120.590 13 213 1.4E-60 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily TMO_1894 61bc2855f9c1104d673e829cb518b924 216 SUPERFAMILY SSF51197 17 211 2.2E-60 T 14-10-2018 TMO_b0349 d7d0a9c7f2766e7c7518f9f793afd20c 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TMO_b0349 d7d0a9c7f2766e7c7518f9f793afd20c 400 Pfam PF00155 Aminotransferase class I and II 32 386 1.4E-66 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_b0349 d7d0a9c7f2766e7c7518f9f793afd20c 400 Gene3D G3DSA:3.40.640.10 63 286 2.7E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_b0349 d7d0a9c7f2766e7c7518f9f793afd20c 400 Gene3D G3DSA:3.90.1150.10 26 390 2.7E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_b0349 d7d0a9c7f2766e7c7518f9f793afd20c 400 SUPERFAMILY SSF53383 1 397 8.48E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_2862 1059c3f6eacd9860614e7c3ec9be7b36 258 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_2862 1059c3f6eacd9860614e7c3ec9be7b36 258 Pfam PF00005 ABC transporter 28 182 2.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_2862 1059c3f6eacd9860614e7c3ec9be7b36 258 Gene3D G3DSA:3.40.50.300 10 257 5.0E-77 T 14-10-2018 TMO_2862 1059c3f6eacd9860614e7c3ec9be7b36 258 PIRSF PIRSF039085 9 258 1.8E-108 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TMO_2862 1059c3f6eacd9860614e7c3ec9be7b36 258 SMART SM00382 37 230 2.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2862 1059c3f6eacd9860614e7c3ec9be7b36 258 SUPERFAMILY SSF52540 12 252 5.79E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0648 cfab65e4a5be13862bb4c01aed780621 324 Gene3D G3DSA:3.90.180.10 12 317 7.3E-108 T 14-10-2018 TMO_0648 cfab65e4a5be13862bb4c01aed780621 324 SUPERFAMILY SSF50129 3 142 5.93E-40 T 14-10-2018 IPR011032 GroES-like superfamily TMO_0648 cfab65e4a5be13862bb4c01aed780621 324 Gene3D G3DSA:3.40.50.720 124 266 7.3E-108 T 14-10-2018 TMO_0648 cfab65e4a5be13862bb4c01aed780621 324 Pfam PF00107 Zinc-binding dehydrogenase 152 267 4.5E-32 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_0648 cfab65e4a5be13862bb4c01aed780621 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 6.1E-11 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_0648 cfab65e4a5be13862bb4c01aed780621 324 SUPERFAMILY SSF51735 113 271 1.04E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0648 cfab65e4a5be13862bb4c01aed780621 324 SMART SM00829 11 321 2.2E-63 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_1911 af668f6c7a8964cc0dcf46f3f9033b3a 218 SUPERFAMILY SSF53335 1 192 3.47E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_1911 af668f6c7a8964cc0dcf46f3f9033b3a 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 177 7.1E-37 T 14-10-2018 TMO_1911 af668f6c7a8964cc0dcf46f3f9033b3a 218 Gene3D G3DSA:3.40.50.150 2 203 9.1E-50 T 14-10-2018 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 PIRSF PIRSF001529 1 429 8.2E-162 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 Gene3D G3DSA:1.10.287.40 1 104 6.8E-26 T 14-10-2018 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 421 3.5E-150 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 SUPERFAMILY SSF46589 1 112 6.28E-29 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 3.2E-29 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 PRINTS PR00981 Seryl-tRNA synthetase signature 320 333 2.7E-29 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 PRINTS PR00981 Seryl-tRNA synthetase signature 355 371 2.7E-29 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 PRINTS PR00981 Seryl-tRNA synthetase signature 268 280 2.7E-29 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 PRINTS PR00981 Seryl-tRNA synthetase signature 280 293 2.7E-29 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 PRINTS PR00981 Seryl-tRNA synthetase signature 337 353 2.7E-29 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 SUPERFAMILY SSF55681 116 422 3.11E-88 T 14-10-2018 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 Gene3D G3DSA:3.30.930.10 106 428 5.3E-110 T 14-10-2018 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 404 7.7E-31 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_1539 40604b3a62210795e73a7ecabbdff2ed 429 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 426 40.285 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TMO_0439 4a64f6a0043811ebbd197723793b8978 221 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 213 221 - T 14-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 TMO_0439 4a64f6a0043811ebbd197723793b8978 221 Pfam PF03922 OmpW family 41 221 8.2E-56 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 TMO_0439 4a64f6a0043811ebbd197723793b8978 221 Gene3D G3DSA:2.40.160.20 40 221 8.0E-60 T 14-10-2018 TMO_0439 4a64f6a0043811ebbd197723793b8978 221 SUPERFAMILY SSF56925 40 221 6.02E-31 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TMO_2978 e06d9684ab715beb7bfc9c4ed46c06b8 158 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 4 158 35.43 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH TMO_2978 e06d9684ab715beb7bfc9c4ed46c06b8 158 SUPERFAMILY SSF55811 8 153 2.57E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TMO_2978 e06d9684ab715beb7bfc9c4ed46c06b8 158 Pfam PF00293 NUDIX domain 10 148 1.6E-24 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_2978 e06d9684ab715beb7bfc9c4ed46c06b8 158 Gene3D G3DSA:3.90.79.10 2 157 5.8E-44 T 14-10-2018 TMO_2978 e06d9684ab715beb7bfc9c4ed46c06b8 158 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_2978 e06d9684ab715beb7bfc9c4ed46c06b8 158 PRINTS PR00502 NUDIX hydrolase family signature 52 67 2.3E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TMO_2978 e06d9684ab715beb7bfc9c4ed46c06b8 158 PRINTS PR00502 NUDIX hydrolase family signature 38 52 2.3E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TMO_c0566 93683b240b7065da703d6e7b2071baec 156 Pfam PF08905 Domain of unknown function (DUF1850) 34 120 1.6E-22 T 14-10-2018 IPR015001 Protein of unknown function DUF1850 TMO_0841 8a05115fc805eff6b5f364194c3170ae 163 Gene3D G3DSA:1.10.10.10 2 161 1.9E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0841 8a05115fc805eff6b5f364194c3170ae 163 SUPERFAMILY SSF46785 6 144 4.25E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0841 8a05115fc805eff6b5f364194c3170ae 163 Pfam PF01638 HxlR-like helix-turn-helix 25 105 2.1E-14 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type TMO_3507 b701268f580528613a4c2fcd6d10f19b 441 Pfam PF11812 Domain of unknown function (DUF3333) 27 174 3.5E-51 T 14-10-2018 IPR024573 Domain of unknown function DUF3333 TMO_3507 b701268f580528613a4c2fcd6d10f19b 441 Gene3D G3DSA:1.10.3720.10 214 440 4.1E-35 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3507 b701268f580528613a4c2fcd6d10f19b 441 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 200 438 4.8E-65 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 TMO_3507 b701268f580528613a4c2fcd6d10f19b 441 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 241 438 1.7E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3507 b701268f580528613a4c2fcd6d10f19b 441 SUPERFAMILY SSF161098 217 434 5.1E-36 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1448 ed9d476c190a8cea5a47c5e4fe5ea7bd 360 Gene3D G3DSA:3.20.20.100 42 309 9.4E-46 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_1448 ed9d476c190a8cea5a47c5e4fe5ea7bd 360 SUPERFAMILY SSF51430 50 315 1.7E-48 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_1448 ed9d476c190a8cea5a47c5e4fe5ea7bd 360 Pfam PF00248 Aldo/keto reductase family 63 315 1.7E-28 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_2560 35bba94c5bfe530c9881e808f73ecd5c 121 Pfam PF00072 Response regulator receiver domain 5 115 7.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2560 35bba94c5bfe530c9881e808f73ecd5c 121 Gene3D G3DSA:3.40.50.12740 1 121 4.4E-43 T 14-10-2018 TMO_2560 35bba94c5bfe530c9881e808f73ecd5c 121 SMART SM00448 3 116 4.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_2560 35bba94c5bfe530c9881e808f73ecd5c 121 SUPERFAMILY SSF52172 3 121 3.98E-36 T 14-10-2018 IPR011006 CheY-like superfamily TMO_c0799 f33496687dd2307cb8b0037adf72cb60 272 Pfam PF05175 Methyltransferase small domain 50 147 1.0E-11 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 TMO_c0799 f33496687dd2307cb8b0037adf72cb60 272 SUPERFAMILY SSF53335 50 219 3.47E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0799 f33496687dd2307cb8b0037adf72cb60 272 Gene3D G3DSA:3.40.50.150 47 255 1.9E-47 T 14-10-2018 TMO_c0799 f33496687dd2307cb8b0037adf72cb60 272 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 135 141 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TMO_1916 2e206281aa36fe13e1ffb17d8e0addf6 226 SUPERFAMILY SSF54523 7 121 1.02E-5 T 14-10-2018 TMO_2715 8e1d76ddf0438214081cf02f4cecdb76 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 3.0E-13 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2715 8e1d76ddf0438214081cf02f4cecdb76 44 Pfam PF00468 Ribosomal protein L34 2 44 2.6E-22 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2715 8e1d76ddf0438214081cf02f4cecdb76 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_2715 8e1d76ddf0438214081cf02f4cecdb76 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.388 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2715 8e1d76ddf0438214081cf02f4cecdb76 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 1.0E-21 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_c0815 960a2befc8f249efca12576649788c77 201 SUPERFAMILY SSF48498 89 175 1.13E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_c0815 960a2befc8f249efca12576649788c77 201 Pfam PF13305 WHG domain 96 167 2.5E-11 T 14-10-2018 IPR025996 WHG domain TMO_c0815 960a2befc8f249efca12576649788c77 201 SUPERFAMILY SSF46689 13 84 4.02E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0815 960a2befc8f249efca12576649788c77 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0815 960a2befc8f249efca12576649788c77 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_c0815 960a2befc8f249efca12576649788c77 201 Gene3D G3DSA:1.10.357.10 7 187 1.2E-46 T 14-10-2018 TMO_c0815 960a2befc8f249efca12576649788c77 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 8.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0560 ee5454d27df9d189e8f89e33b5075855 195 SUPERFAMILY SSF52540 10 98 1.7E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0560 ee5454d27df9d189e8f89e33b5075855 195 Pfam PF13521 AAA domain 10 159 1.2E-19 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain TMO_0560 ee5454d27df9d189e8f89e33b5075855 195 Gene3D G3DSA:3.40.50.300 9 173 4.0E-14 T 14-10-2018 TMO_c0683 fdcb4124d96967e1bd2ec7015a879452 350 Gene3D G3DSA:1.10.287.470 83 109 2.3E-11 T 14-10-2018 TMO_c0683 fdcb4124d96967e1bd2ec7015a879452 350 SUPERFAMILY SSF111369 51 118 6.67E-8 T 14-10-2018 TMO_c0683 fdcb4124d96967e1bd2ec7015a879452 350 SUPERFAMILY SSF111369 121 289 4.05E-12 T 14-10-2018 TMO_c0683 fdcb4124d96967e1bd2ec7015a879452 350 Gene3D G3DSA:1.10.287.470 114 184 6.5E-8 T 14-10-2018 TMO_c0683 fdcb4124d96967e1bd2ec7015a879452 350 Gene3D G3DSA:2.40.30.170 230 346 3.7E-35 T 14-10-2018 TMO_c0683 fdcb4124d96967e1bd2ec7015a879452 350 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 291 4.0E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_c0683 fdcb4124d96967e1bd2ec7015a879452 350 Gene3D G3DSA:2.40.50.100 52 82 2.3E-11 T 14-10-2018 TMO_1320 cafe517b7d79beea87420b2d94e9989e 366 Pfam PF08402 TOBE domain 264 345 8.9E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_1320 cafe517b7d79beea87420b2d94e9989e 366 Gene3D G3DSA:2.40.50.940 260 346 7.4E-5 T 14-10-2018 TMO_1320 cafe517b7d79beea87420b2d94e9989e 366 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1320 cafe517b7d79beea87420b2d94e9989e 366 SUPERFAMILY SSF52540 13 248 1.3E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1320 cafe517b7d79beea87420b2d94e9989e 366 SMART SM00382 37 220 8.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1320 cafe517b7d79beea87420b2d94e9989e 366 Pfam PF00005 ABC transporter 28 170 1.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1320 cafe517b7d79beea87420b2d94e9989e 366 Gene3D G3DSA:3.40.50.300 9 247 7.6E-74 T 14-10-2018 TMO_1320 cafe517b7d79beea87420b2d94e9989e 366 Gene3D G3DSA:2.40.50.140 268 337 7.4E-5 T 14-10-2018 TMO_1320 cafe517b7d79beea87420b2d94e9989e 366 SUPERFAMILY SSF50331 251 353 1.87E-13 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_b0159 b0354ddede433fd142548eccd44c104e 596 Pfam PF00884 Sulfatase 11 392 4.2E-48 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TMO_b0159 b0354ddede433fd142548eccd44c104e 596 Gene3D G3DSA:3.40.720.10 499 585 1.3E-6 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TMO_b0159 b0354ddede433fd142548eccd44c104e 596 SUPERFAMILY SSF53649 10 570 1.64E-71 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TMO_0963 d69193b2e87baa3180795400a8e7c3f7 312 SUPERFAMILY SSF52768 1 309 1.82E-100 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily TMO_0963 d69193b2e87baa3180795400a8e7c3f7 312 Gene3D G3DSA:3.40.800.20 1 310 2.8E-116 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0963 d69193b2e87baa3180795400a8e7c3f7 312 PRINTS PR01270 Histone deacetylase superfamily signature 123 146 2.5E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0963 d69193b2e87baa3180795400a8e7c3f7 312 PRINTS PR01270 Histone deacetylase superfamily signature 157 172 2.5E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0963 d69193b2e87baa3180795400a8e7c3f7 312 PRINTS PR01270 Histone deacetylase superfamily signature 238 248 2.5E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_0963 d69193b2e87baa3180795400a8e7c3f7 312 Pfam PF00850 Histone deacetylase domain 20 308 1.0E-84 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TMO_b0272 74f7d27720aa69212a50838cf3ff6b0a 123 Gene3D G3DSA:2.30.30.240 1 93 4.1E-31 T 14-10-2018 TMO_b0272 74f7d27720aa69212a50838cf3ff6b0a 123 SUPERFAMILY SSF50346 6 122 5.49E-32 T 14-10-2018 IPR011033 PRC-barrel-like superfamily TMO_b0272 74f7d27720aa69212a50838cf3ff6b0a 123 Pfam PF05239 PRC-barrel domain 13 88 1.7E-16 T 14-10-2018 IPR027275 PRC-barrel domain TMO_b0356 dc82327762315bcc0e487150292c3251 300 Gene3D G3DSA:3.40.190.10 111 276 7.3E-40 T 14-10-2018 TMO_b0356 dc82327762315bcc0e487150292c3251 300 SUPERFAMILY SSF53850 106 294 1.19E-20 T 14-10-2018 TMO_b0356 dc82327762315bcc0e487150292c3251 300 SUPERFAMILY SSF46785 19 123 1.14E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0356 dc82327762315bcc0e487150292c3251 300 Gene3D G3DSA:3.40.190.10 177 270 7.3E-40 T 14-10-2018 TMO_b0356 dc82327762315bcc0e487150292c3251 300 Gene3D G3DSA:1.10.10.10 21 109 2.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0356 dc82327762315bcc0e487150292c3251 300 Pfam PF03466 LysR substrate binding domain 105 294 1.1E-20 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_b0356 dc82327762315bcc0e487150292c3251 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 59 70 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0356 dc82327762315bcc0e487150292c3251 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0356 dc82327762315bcc0e487150292c3251 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 59 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0356 dc82327762315bcc0e487150292c3251 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 81 1.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_b0447 bca867a9e1cf199f43e3c5549bd00d1e 298 Gene3D G3DSA:3.40.50.1820 34 292 1.9E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0447 bca867a9e1cf199f43e3c5549bd00d1e 298 SUPERFAMILY SSF53474 42 278 2.81E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0447 bca867a9e1cf199f43e3c5549bd00d1e 298 Pfam PF07859 alpha/beta hydrolase fold 81 192 9.8E-15 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 TMO_b0320 6326fc744e2b510bea7df173fd8eb684 81 Pfam PF03621 MbtH-like protein 5 51 2.1E-22 T 14-10-2018 IPR005153 MbtH-like domain TMO_b0320 6326fc744e2b510bea7df173fd8eb684 81 SUPERFAMILY SSF160582 3 67 1.1E-27 T 14-10-2018 IPR038020 MbtH-like domain superfamily TMO_b0320 6326fc744e2b510bea7df173fd8eb684 81 Gene3D G3DSA:3.90.820.10 2 70 3.5E-31 T 14-10-2018 TMO_b0320 6326fc744e2b510bea7df173fd8eb684 81 SMART SM00923 1 51 3.7E-23 T 14-10-2018 IPR005153 MbtH-like domain TMO_1272 b4dd23b0405a3881a05d176b2b23046d 358 SUPERFAMILY SSF53850 151 265 5.05E-7 T 14-10-2018 TMO_1272 b4dd23b0405a3881a05d176b2b23046d 358 Gene3D G3DSA:3.40.190.170 47 345 2.9E-59 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_1272 b4dd23b0405a3881a05d176b2b23046d 358 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 55 269 1.0E-22 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_2166 a650b5b59e2a50cadb40e4747b4638ca 267 Pfam PF00994 Probable molybdopterin binding domain 26 184 2.4E-33 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_2166 a650b5b59e2a50cadb40e4747b4638ca 267 Gene3D G3DSA:3.40.980.10 22 186 1.7E-50 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_2166 a650b5b59e2a50cadb40e4747b4638ca 267 SUPERFAMILY SSF53218 24 215 8.51E-38 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily TMO_2166 a650b5b59e2a50cadb40e4747b4638ca 267 SMART SM00852 26 187 1.8E-28 T 14-10-2018 IPR001453 MoaB/Mog domain TMO_c0669 c3d732dcc63f92fe5ba8228ce3451d2b 212 Pfam PF00326 Prolyl oligopeptidase family 150 199 2.1E-5 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TMO_c0669 c3d732dcc63f92fe5ba8228ce3451d2b 212 Pfam PF12146 Serine aminopeptidase, S33 37 134 8.9E-11 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 TMO_c0669 c3d732dcc63f92fe5ba8228ce3451d2b 212 Gene3D G3DSA:3.40.50.1820 2 210 3.6E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0669 c3d732dcc63f92fe5ba8228ce3451d2b 212 SUPERFAMILY SSF53474 4 208 1.3E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2230 c0c812c52d79ece5f3a87dffb3038380 151 SUPERFAMILY SSF52206 46 107 1.03E-7 T 14-10-2018 IPR036490 Hypothetical protein MTH538 superfamily TMO_2230 c0c812c52d79ece5f3a87dffb3038380 151 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 6 112 4.3E-24 T 14-10-2018 IPR015032 MTH538 TIR-like domain TMO_c0074 e4482e881156dd9174e0ce8aa54b9fbe 101 Gene3D G3DSA:3.30.70.100 30 101 2.6E-22 T 14-10-2018 TMO_c0074 e4482e881156dd9174e0ce8aa54b9fbe 101 PRINTS PR00946 Mercury scavenger protein signature 41 57 3.8E-40 T 14-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 TMO_c0074 e4482e881156dd9174e0ce8aa54b9fbe 101 PRINTS PR00946 Mercury scavenger protein signature 72 86 3.8E-40 T 14-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 TMO_c0074 e4482e881156dd9174e0ce8aa54b9fbe 101 PRINTS PR00946 Mercury scavenger protein signature 86 100 3.8E-40 T 14-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 TMO_c0074 e4482e881156dd9174e0ce8aa54b9fbe 101 PRINTS PR00946 Mercury scavenger protein signature 30 41 3.8E-40 T 14-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 TMO_c0074 e4482e881156dd9174e0ce8aa54b9fbe 101 PRINTS PR00946 Mercury scavenger protein signature 57 72 3.8E-40 T 14-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 TMO_c0074 e4482e881156dd9174e0ce8aa54b9fbe 101 PRINTS PR00946 Mercury scavenger protein signature 12 30 3.8E-40 T 14-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 TMO_c0074 e4482e881156dd9174e0ce8aa54b9fbe 101 ProSitePatterns PS01047 Heavy-metal-associated domain. 38 67 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TMO_c0074 e4482e881156dd9174e0ce8aa54b9fbe 101 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 11 101 1.5E-44 T 14-10-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 TMO_c0074 e4482e881156dd9174e0ce8aa54b9fbe 101 Pfam PF00403 Heavy-metal-associated domain 35 95 1.9E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_c0074 e4482e881156dd9174e0ce8aa54b9fbe 101 SUPERFAMILY SSF55008 27 99 4.19E-21 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TMO_a0387 fdad1f08c2c5672604655a8c6c56564d 352 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 318 2.7E-35 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_a0387 fdad1f08c2c5672604655a8c6c56564d 352 Gene3D G3DSA:3.40.190.170 32 340 8.8E-71 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_a0387 fdad1f08c2c5672604655a8c6c56564d 352 SUPERFAMILY SSF53850 134 266 2.9E-5 T 14-10-2018 TMO_2548 c99edd40cdb12bd2a38c2073a9c36af4 211 SMART SM01207 15 190 2.7E-81 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 TMO_2548 c99edd40cdb12bd2a38c2073a9c36af4 211 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 9 199 3.4E-55 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 TMO_2548 c99edd40cdb12bd2a38c2073a9c36af4 211 Pfam PF02660 Glycerol-3-phosphate acyltransferase 17 189 1.5E-48 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 TMO_2548 c99edd40cdb12bd2a38c2073a9c36af4 211 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 12 198 20.38 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 TMO_a0027 fab06a5366fe56b5bd838de9a2afdf6e 538 Gene3D G3DSA:3.10.105.10 295 509 6.6E-27 T 14-10-2018 TMO_a0027 fab06a5366fe56b5bd838de9a2afdf6e 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 444 4.2E-70 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_a0027 fab06a5366fe56b5bd838de9a2afdf6e 538 Gene3D G3DSA:3.40.190.10 15 294 7.3E-53 T 14-10-2018 TMO_a0027 fab06a5366fe56b5bd838de9a2afdf6e 538 SUPERFAMILY SSF53850 37 534 1.81E-98 T 14-10-2018 TMO_b0199 ee85a86a3d838e2d84034b3bce64c816 350 SUPERFAMILY SSF53850 46 268 3.19E-27 T 14-10-2018 TMO_b0199 ee85a86a3d838e2d84034b3bce64c816 350 Gene3D G3DSA:3.40.190.10 37 135 1.1E-12 T 14-10-2018 TMO_b0199 ee85a86a3d838e2d84034b3bce64c816 350 Gene3D G3DSA:3.40.190.10 151 347 3.6E-28 T 14-10-2018 TMO_b0199 ee85a86a3d838e2d84034b3bce64c816 350 Pfam PF09084 NMT1/THI5 like 50 268 1.1E-17 T 14-10-2018 IPR015168 SsuA/THI5-like TMO_a0157 b140e6564635f71d3ef004c13553850b 177 Gene3D G3DSA:2.40.50.100 92 160 3.2E-18 T 14-10-2018 TMO_a0157 b140e6564635f71d3ef004c13553850b 177 SUPERFAMILY SSF51230 88 160 1.57E-16 T 14-10-2018 IPR011053 Single hybrid motif TMO_a0157 b140e6564635f71d3ef004c13553850b 177 Pfam PF00364 Biotin-requiring enzyme 94 160 2.0E-12 T 14-10-2018 IPR000089 Biotin/lipoyl attachment TMO_0317 621ed67eadec664f3f944ba2a84bbe0d 269 SUPERFAMILY SSF55961 105 238 1.33E-10 T 14-10-2018 TMO_0317 621ed67eadec664f3f944ba2a84bbe0d 269 SUPERFAMILY SSF46785 2 105 4.62E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0317 621ed67eadec664f3f944ba2a84bbe0d 269 Gene3D G3DSA:1.10.10.10 3 102 5.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0317 621ed67eadec664f3f944ba2a84bbe0d 269 Pfam PF12840 Helix-turn-helix domain 6 63 2.5E-14 T 14-10-2018 TMO_0317 621ed67eadec664f3f944ba2a84bbe0d 269 Gene3D G3DSA:3.30.530.20 103 242 2.8E-13 T 14-10-2018 IPR023393 START-like domain superfamily TMO_0317 621ed67eadec664f3f944ba2a84bbe0d 269 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 4.9E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0317 621ed67eadec664f3f944ba2a84bbe0d 269 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 4.9E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0317 621ed67eadec664f3f944ba2a84bbe0d 269 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 4.9E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0317 621ed67eadec664f3f944ba2a84bbe0d 269 SMART SM00418 5 87 3.2E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_0942 1c8001fdfbd8bf7aa193dc9a7be6ea67 311 Pfam PF03547 Membrane transport protein 160 304 4.2E-11 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 TMO_0942 1c8001fdfbd8bf7aa193dc9a7be6ea67 311 Pfam PF03547 Membrane transport protein 9 151 4.3E-10 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 TMO_c0171 2240d16aeab5651dcff268d7a51565cb 736 SUPERFAMILY SSF48452 324 461 1.39E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0171 2240d16aeab5651dcff268d7a51565cb 736 Gene3D G3DSA:1.25.40.10 309 512 3.6E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_0805 e4bc3d2a3293ce1ff4cb912ea4960161 391 Gene3D G3DSA:3.40.50.12780 30 389 1.3E-86 T 14-10-2018 TMO_0805 e4bc3d2a3293ce1ff4cb912ea4960161 391 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0805 e4bc3d2a3293ce1ff4cb912ea4960161 391 Pfam PF00501 AMP-binding enzyme 46 387 2.2E-72 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0805 e4bc3d2a3293ce1ff4cb912ea4960161 391 SUPERFAMILY SSF56801 29 387 1.44E-83 T 14-10-2018 TMO_c0225 00a7efbf55d28cb4948166b1b484799c 159 Gene3D G3DSA:3.10.129.10 12 150 1.3E-8 T 14-10-2018 TMO_c0225 00a7efbf55d28cb4948166b1b484799c 159 SUPERFAMILY SSF54637 24 148 1.36E-8 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_c0499 be8b65f2f5ca43ee470e657754f5e27a 327 Pfam PF09084 NMT1/THI5 like 43 249 1.8E-23 T 14-10-2018 IPR015168 SsuA/THI5-like TMO_c0499 be8b65f2f5ca43ee470e657754f5e27a 327 Gene3D G3DSA:3.40.190.10 28 124 3.7E-14 T 14-10-2018 TMO_c0499 be8b65f2f5ca43ee470e657754f5e27a 327 SMART SM00062 35 245 0.0017 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_c0499 be8b65f2f5ca43ee470e657754f5e27a 327 SUPERFAMILY SSF53850 30 249 2.63E-37 T 14-10-2018 TMO_c0499 be8b65f2f5ca43ee470e657754f5e27a 327 Gene3D G3DSA:3.40.190.10 132 297 1.1E-22 T 14-10-2018 TMO_c0899 d18afd45be60293cebc8d04d03d20267 197 Pfam PF07484 Phage Tail Collar Domain 9 61 5.3E-21 T 14-10-2018 IPR011083 Phage tail collar domain TMO_c0899 d18afd45be60293cebc8d04d03d20267 197 SUPERFAMILY SSF88874 1 191 5.62E-31 T 14-10-2018 TMO_c0899 d18afd45be60293cebc8d04d03d20267 197 Gene3D G3DSA:4.10.1070.10 59 100 2.3E-13 T 14-10-2018 TMO_c0899 d18afd45be60293cebc8d04d03d20267 197 Gene3D G3DSA:3.90.1340.10 5 58 2.3E-13 T 14-10-2018 IPR037053 Phage tail collar domain superfamily TMO_a0464 86be5787613481532ef97bb8a054aa27 611 SUPERFAMILY SSF56801 29 552 9.81E-112 T 14-10-2018 TMO_a0464 86be5787613481532ef97bb8a054aa27 611 Pfam PF00501 AMP-binding enzyme 39 455 5.8E-71 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_a0464 86be5787613481532ef97bb8a054aa27 611 Gene3D G3DSA:3.40.50.12780 19 451 1.4E-82 T 14-10-2018 TMO_a0464 86be5787613481532ef97bb8a054aa27 611 ProSitePatterns PS00455 Putative AMP-binding domain signature. 204 215 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_a0464 86be5787613481532ef97bb8a054aa27 611 Pfam PF13193 AMP-binding enzyme C-terminal domain 465 538 2.2E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0464 86be5787613481532ef97bb8a054aa27 611 Gene3D G3DSA:3.30.300.310 452 554 2.2E-20 T 14-10-2018 TMO_0251 e8469e31197e7aade07ceaa1cfbf1964 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 100 6.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0251 e8469e31197e7aade07ceaa1cfbf1964 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 144 6.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0251 e8469e31197e7aade07ceaa1cfbf1964 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 6.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0251 e8469e31197e7aade07ceaa1cfbf1964 316 Pfam PF12697 Alpha/beta hydrolase family 61 305 6.3E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_0251 e8469e31197e7aade07ceaa1cfbf1964 316 Gene3D G3DSA:3.40.50.1820 19 315 1.1E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0251 e8469e31197e7aade07ceaa1cfbf1964 316 SUPERFAMILY SSF53474 31 311 2.9E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0409 737ef52c274fe0da1e2a563c1ec805f3 229 Gene3D G3DSA:3.40.50.12500 8 220 4.4E-37 T 14-10-2018 TMO_1771 7e737acc24219dfd3919d644142277c0 158 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 15 156 32.821 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TMO_1771 7e737acc24219dfd3919d644142277c0 158 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 15 154 9.1E-54 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TMO_1771 7e737acc24219dfd3919d644142277c0 158 Gene3D G3DSA:3.10.129.10 6 158 5.7E-59 T 14-10-2018 TMO_1771 7e737acc24219dfd3919d644142277c0 158 SUPERFAMILY SSF54637 14 154 1.15E-44 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_1771 7e737acc24219dfd3919d644142277c0 158 Pfam PF07977 FabA-like domain 24 148 4.5E-34 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TMO_0351 1ec1bbc7d6aed39bc99626cd2c28793d 317 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 314 5.9E-126 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_0351 1ec1bbc7d6aed39bc99626cd2c28793d 317 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 47.77 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_0351 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 3.1E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_0351 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 3.1E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_0351 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 3.1E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_0351 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 3.1E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_0351 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 3.1E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_0351 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 3.1E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_0351 1ec1bbc7d6aed39bc99626cd2c28793d 317 SUPERFAMILY SSF52096 5 313 4.02E-95 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_0351 1ec1bbc7d6aed39bc99626cd2c28793d 317 Gene3D G3DSA:3.90.226.10 1 314 4.9E-112 T 14-10-2018 TMO_0351 1ec1bbc7d6aed39bc99626cd2c28793d 317 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 147 2.5E-59 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TMO_c0769 9532baa46b428ce063337e64b964f7df 347 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 322 3.9E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2444 d980c06b6b6024df6664c9860eed5a6c 403 SUPERFAMILY SSF53686 32 354 6.55E-58 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_2444 d980c06b6b6024df6664c9860eed5a6c 403 Gene3D G3DSA:3.40.50.1100 36 382 9.1E-117 T 14-10-2018 TMO_2444 d980c06b6b6024df6664c9860eed5a6c 403 Gene3D G3DSA:3.40.50.1100 74 197 9.1E-117 T 14-10-2018 TMO_2444 d980c06b6b6024df6664c9860eed5a6c 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 37 373 2.6E-63 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_c0344 8a40985786967be22fddb7b8dd41e892 140 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 17 52 2.5E-12 T 14-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal TMO_c0344 8a40985786967be22fddb7b8dd41e892 140 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 58 118 2.3E-18 T 14-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal TMO_c0344 8a40985786967be22fddb7b8dd41e892 140 SUPERFAMILY SSF50249 6 126 7.2E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_c0344 8a40985786967be22fddb7b8dd41e892 140 Gene3D G3DSA:1.10.12.20 9 57 4.2E-5 T 14-10-2018 TMO_2245 b4bf234d03d707107d07df541bae82ea 312 Gene3D G3DSA:1.20.1510.10 23 235 2.4E-34 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_2245 b4bf234d03d707107d07df541bae82ea 312 Pfam PF01545 Cation efflux family 31 235 6.3E-37 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_2245 b4bf234d03d707107d07df541bae82ea 312 SUPERFAMILY SSF161111 21 236 7.85E-50 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_2245 b4bf234d03d707107d07df541bae82ea 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 25 308 2.2E-69 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_2025 87670f6e6a77ac82549fc298fedb21ac 660 Gene3D G3DSA:3.10.105.10 371 621 6.4E-34 T 14-10-2018 TMO_2025 87670f6e6a77ac82549fc298fedb21ac 660 SUPERFAMILY SSF53850 111 644 1.18E-65 T 14-10-2018 TMO_2025 87670f6e6a77ac82549fc298fedb21ac 660 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 139 529 1.8E-52 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_2025 87670f6e6a77ac82549fc298fedb21ac 660 Gene3D G3DSA:3.40.190.10 101 363 3.1E-28 T 14-10-2018 TMO_1709 a45bea9d0c9a01c0f28f7b182c204adc 163 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 159 1.1E-45 T 14-10-2018 IPR008136 CinA, C-terminal TMO_1709 a45bea9d0c9a01c0f28f7b182c204adc 163 Pfam PF02464 Competence-damaged protein 9 160 4.2E-57 T 14-10-2018 IPR008136 CinA, C-terminal TMO_1709 a45bea9d0c9a01c0f28f7b182c204adc 163 Gene3D G3DSA:3.90.950.20 1 162 1.4E-58 T 14-10-2018 IPR036653 CinA-like, C-terminal TMO_1709 a45bea9d0c9a01c0f28f7b182c204adc 163 SUPERFAMILY SSF142433 4 161 4.58E-55 T 14-10-2018 IPR036653 CinA-like, C-terminal TMO_a0250 8e0d8c05f00e71ad44245f4d7a517cc2 300 Gene3D G3DSA:2.120.10.30 10 295 2.4E-86 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TMO_a0250 8e0d8c05f00e71ad44245f4d7a517cc2 300 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 26 265 5.4E-69 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region TMO_a0250 8e0d8c05f00e71ad44245f4d7a517cc2 300 SUPERFAMILY SSF63829 20 292 1.08E-58 T 14-10-2018 TMO_a0250 8e0d8c05f00e71ad44245f4d7a517cc2 300 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 205 222 1.5E-30 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) TMO_a0250 8e0d8c05f00e71ad44245f4d7a517cc2 300 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 142 164 1.5E-30 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) TMO_a0250 8e0d8c05f00e71ad44245f4d7a517cc2 300 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 102 123 1.5E-30 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) TMO_a0250 8e0d8c05f00e71ad44245f4d7a517cc2 300 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 247 265 1.5E-30 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) TMO_a0250 8e0d8c05f00e71ad44245f4d7a517cc2 300 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 27 44 1.5E-30 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) TMO_2572 756abf894ea518e2308107a37243c841 466 Pfam PF00939 Sodium:sulfate symporter transmembrane region 34 464 1.6E-23 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 TMO_2151 08b45536c4da87a3ee435c2b8164d2d6 53 Pfam PF04324 BFD-like [2Fe-2S] binding domain 5 45 8.9E-8 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain TMO_2151 08b45536c4da87a3ee435c2b8164d2d6 53 Gene3D G3DSA:1.10.10.1100 1 50 6.7E-6 T 14-10-2018 TMO_0729 6238fbbca1d108633e5806ff12c97856 218 Gene3D G3DSA:1.10.10.10 60 174 5.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0729 6238fbbca1d108633e5806ff12c97856 218 SUPERFAMILY SSF46785 75 184 4.03E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0729 6238fbbca1d108633e5806ff12c97856 218 Pfam PF03551 Transcriptional regulator PadR-like family 79 148 7.4E-17 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal TMO_1075 ba96be262da43468a2c6db9bfed82b8e 707 Pfam PF07196 Flagellin hook IN motif 170 229 6.4E-8 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TMO_1075 ba96be262da43468a2c6db9bfed82b8e 707 Pfam PF07196 Flagellin hook IN motif 306 360 1.7E-6 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TMO_1075 ba96be262da43468a2c6db9bfed82b8e 707 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 375 689 1.2E-42 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 TMO_1075 ba96be262da43468a2c6db9bfed82b8e 707 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 28 141 9.3E-18 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 TMO_1686 38f1d7555c8f86565a277e0cbe6cc7e4 186 Pfam PF04542 Sigma-70 region 2 15 74 2.6E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TMO_1686 38f1d7555c8f86565a277e0cbe6cc7e4 186 Pfam PF08281 Sigma-70, region 4 103 155 4.0E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_1686 38f1d7555c8f86565a277e0cbe6cc7e4 186 Gene3D G3DSA:1.10.10.10 98 161 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1686 38f1d7555c8f86565a277e0cbe6cc7e4 186 Gene3D G3DSA:1.10.1740.10 5 79 4.0E-18 T 14-10-2018 TMO_1686 38f1d7555c8f86565a277e0cbe6cc7e4 186 SUPERFAMILY SSF88946 14 89 5.49E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TMO_1686 38f1d7555c8f86565a277e0cbe6cc7e4 186 SUPERFAMILY SSF88659 100 157 3.92E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TMO_1686 38f1d7555c8f86565a277e0cbe6cc7e4 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 156 1.7E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TMO_3290 fdba1b35e4f120230dc6320160823c09 302 SUPERFAMILY SSF53448 1 211 3.38E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_3290 fdba1b35e4f120230dc6320160823c09 302 Gene3D G3DSA:3.90.550.10 1 233 3.0E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_3290 fdba1b35e4f120230dc6320160823c09 302 Pfam PF00535 Glycosyl transferase family 2 2 127 2.9E-30 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TMO_b0281 7313c202bcd36363645ba47e9b547ab1 404 SUPERFAMILY SSF103473 2 397 2.75E-36 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_b0281 7313c202bcd36363645ba47e9b547ab1 404 Gene3D G3DSA:1.20.1250.20 1 395 3.8E-31 T 14-10-2018 TMO_b0281 7313c202bcd36363645ba47e9b547ab1 404 Pfam PF07690 Major Facilitator Superfamily 8 309 1.1E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0650 f906d45b6c79eda0823206a2d1868fbf 353 SUPERFAMILY SSF48613 135 337 1.33E-19 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_c0650 f906d45b6c79eda0823206a2d1868fbf 353 SMART SM01236 193 299 1.9E-18 T 14-10-2018 TMO_c0650 f906d45b6c79eda0823206a2d1868fbf 353 Gene3D G3DSA:1.20.910.10 125 349 1.3E-40 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_c0650 f906d45b6c79eda0823206a2d1868fbf 353 Pfam PF14518 Iron-containing redox enzyme 161 336 1.5E-35 T 14-10-2018 TMO_b0461 dc3791bbd59a6f10faa0dad7184a71a8 402 Pfam PF05940 NnrS protein 19 396 2.6E-106 T 14-10-2018 IPR010266 NnrS TMO_2001 8a05bb5939494f829794c4de13baf4ab 452 SUPERFAMILY SSF58104 160 447 1.74E-56 T 14-10-2018 TMO_2001 8a05bb5939494f829794c4de13baf4ab 452 Pfam PF11563 Protoglobin 11 169 1.8E-38 T 14-10-2018 TMO_2001 8a05bb5939494f829794c4de13baf4ab 452 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 273 410 2.6E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2001 8a05bb5939494f829794c4de13baf4ab 452 SMART SM00283 194 448 1.9E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TMO_2001 8a05bb5939494f829794c4de13baf4ab 452 Gene3D G3DSA:1.10.287.950 171 448 2.0E-50 T 14-10-2018 TMO_2001 8a05bb5939494f829794c4de13baf4ab 452 SUPERFAMILY SSF46458 12 162 3.38E-37 T 14-10-2018 IPR009050 Globin-like superfamily TMO_2001 8a05bb5939494f829794c4de13baf4ab 452 Gene3D G3DSA:1.10.490.10 12 170 4.1E-45 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_c0421 920526d3de1d4f873f5de449e47df00b 222 Pfam PF02525 Flavodoxin-like fold 1 207 4.2E-47 T 14-10-2018 IPR003680 Flavodoxin-like fold TMO_c0421 920526d3de1d4f873f5de449e47df00b 222 SUPERFAMILY SSF52218 1 215 3.84E-58 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_c0421 920526d3de1d4f873f5de449e47df00b 222 Gene3D G3DSA:3.40.50.360 1 219 7.3E-68 T 14-10-2018 IPR029039 Flavoprotein-like superfamily TMO_1965 f3adc8a1db2fc0c8d0660023a68f176d 481 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 468 3.9E-150 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 TMO_1965 f3adc8a1db2fc0c8d0660023a68f176d 481 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 7 469 18.578 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 TMO_1965 f3adc8a1db2fc0c8d0660023a68f176d 481 Pfam PF00361 Proton-conducting membrane transporter 126 417 8.6E-85 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_2755 1095fafe8d43190024803217d145fb7d 192 PIRSF PIRSF032064 12 190 2.3E-31 T 14-10-2018 IPR010593 Protein of unknown function DUF1159 TMO_2755 1095fafe8d43190024803217d145fb7d 192 Pfam PF05258 Protein of unknown function (DUF721) 41 133 1.4E-15 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 TMO_b0400 0c4d631ae2aeb8935398c7cc6160b713 95 Pfam PF07045 Domain of unknown function (DUF1330) 2 95 3.1E-25 T 14-10-2018 IPR010753 Domain of unknown function DUF1330 TMO_b0400 0c4d631ae2aeb8935398c7cc6160b713 95 Gene3D G3DSA:3.30.70.100 1 95 5.9E-23 T 14-10-2018 TMO_b0400 0c4d631ae2aeb8935398c7cc6160b713 95 SUPERFAMILY SSF54909 2 95 1.14E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_2915 3a553a8c3e80311f44f984e31640dafe 471 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 19 453 1.2E-210 T 14-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 TMO_2915 3a553a8c3e80311f44f984e31640dafe 471 Gene3D G3DSA:1.10.220.70 63 148 1.4E-29 T 14-10-2018 TMO_2915 3a553a8c3e80311f44f984e31640dafe 471 Gene3D G3DSA:2.30.170.30 10 61 2.1E-20 T 14-10-2018 TMO_2915 3a553a8c3e80311f44f984e31640dafe 471 PIRSF PIRSF018788 8 464 7.6E-222 T 14-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 TMO_2915 3a553a8c3e80311f44f984e31640dafe 471 Gene3D G3DSA:3.20.20.70 149 460 2.1E-139 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_0100 e2d35bc869a9670add27fa0836a20fc4 303 Gene3D G3DSA:3.30.2010.10 59 147 6.7E-32 T 14-10-2018 TMO_0100 e2d35bc869a9670add27fa0836a20fc4 303 Pfam PF01435 Peptidase family M48 65 280 2.4E-40 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_0100 e2d35bc869a9670add27fa0836a20fc4 303 Hamap MF_00188 Protease HtpX [htpX]. 3 280 28.606 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 TMO_3018 500c738fcb65d9167144c7c5bcd89514 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 1.6E-45 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3018 500c738fcb65d9167144c7c5bcd89514 336 SUPERFAMILY SSF161098 92 319 4.25E-19 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2496 2488b6462d3d25d6748696910d0abf12 287 Pfam PF01435 Peptidase family M48 75 273 1.3E-27 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_2496 2488b6462d3d25d6748696910d0abf12 287 Gene3D G3DSA:3.30.2010.10 72 156 2.9E-18 T 14-10-2018 TMO_c0785 ac0512e44c78752354cad55ea2f0bd03 130 SMART SM00422 5 72 1.3E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0785 ac0512e44c78752354cad55ea2f0bd03 130 Pfam PF13411 MerR HTH family regulatory protein 5 70 6.4E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_c0785 ac0512e44c78752354cad55ea2f0bd03 130 Gene3D G3DSA:1.10.1660.10 2 121 2.8E-26 T 14-10-2018 TMO_c0785 ac0512e44c78752354cad55ea2f0bd03 130 SUPERFAMILY SSF46955 4 111 2.89E-25 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily TMO_1633 e19abeaef298fe29a8ba117888da8695 199 Gene3D G3DSA:3.40.1280.10 15 165 4.1E-18 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_1633 e19abeaef298fe29a8ba117888da8695 199 SUPERFAMILY SSF75217 14 166 9.59E-20 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases TMO_1633 e19abeaef298fe29a8ba117888da8695 199 Pfam PF00588 SpoU rRNA Methylase family 15 155 3.5E-12 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TMO_1008 773eb86bdc964d37fe1fdf6e5d153f65 79 Gene3D G3DSA:3.30.50.10 15 76 6.5E-16 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 TMO_1008 773eb86bdc964d37fe1fdf6e5d153f65 79 SUPERFAMILY SSF57716 19 69 9.27E-13 T 14-10-2018 TMO_1008 773eb86bdc964d37fe1fdf6e5d153f65 79 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 14 72 16.0 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 TMO_1008 773eb86bdc964d37fe1fdf6e5d153f65 79 Pfam PF03884 DNA gyrase inhibitor YacG 19 68 7.3E-15 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 TMO_1194 5061554135f2afe457839622bc58580b 372 Pfam PF02653 Branched-chain amino acid transport system / permease component 63 341 5.2E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_1797 d322962c94a09393553f7d0fd15aa124 188 Gene3D G3DSA:2.30.110.10 8 181 3.5E-44 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_1797 d322962c94a09393553f7d0fd15aa124 188 SUPERFAMILY SSF50475 10 176 2.45E-37 T 14-10-2018 TMO_1797 d322962c94a09393553f7d0fd15aa124 188 Pfam PF01613 Flavin reductase like domain 23 157 2.8E-21 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_1797 d322962c94a09393553f7d0fd15aa124 188 SMART SM00903 19 171 1.3E-14 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 SUPERFAMILY SSF51735 1 253 2.54E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.8E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.8E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.8E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 252 1.0E-70 T 14-10-2018 TMO_1113 3f4ed2f5d841a4266a3d798082a964de 254 Gene3D G3DSA:3.40.50.720 1 254 1.5E-88 T 14-10-2018 TMO_0365 c7b13768c1875759e02f7016d4d44f37 164 PIRSF PIRSF032131 1 164 4.4E-44 T 14-10-2018 IPR009562 Protein of unknown function DUF1178 TMO_0365 c7b13768c1875759e02f7016d4d44f37 164 Pfam PF06676 Protein of unknown function (DUF1178) 1 160 1.6E-54 T 14-10-2018 IPR009562 Protein of unknown function DUF1178 TMO_1909 9c252cd0887e93bea75f8e0a271028be 233 Pfam PF10691 Protein of unknown function (DUF2497) 150 227 4.7E-25 T 14-10-2018 IPR019632 Protein of unknown function DUF2497 TMO_1206 51f10db1f15724333700aa8e901e4c8d 386 Pfam PF13193 AMP-binding enzyme C-terminal domain 293 368 1.1E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_1206 51f10db1f15724333700aa8e901e4c8d 386 SUPERFAMILY SSF56801 7 381 8.9E-102 T 14-10-2018 TMO_1206 51f10db1f15724333700aa8e901e4c8d 386 Gene3D G3DSA:3.40.50.12780 2 280 1.8E-67 T 14-10-2018 TMO_1206 51f10db1f15724333700aa8e901e4c8d 386 Gene3D G3DSA:3.30.300.310 281 382 2.0E-29 T 14-10-2018 TMO_1206 51f10db1f15724333700aa8e901e4c8d 386 Pfam PF00501 AMP-binding enzyme 18 284 2.7E-60 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0112 c07a82ce432b1200f49127aab322cfe3 571 Pfam PF07510 Protein of unknown function (DUF1524) 424 559 4.6E-26 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 TMO_c0112 c07a82ce432b1200f49127aab322cfe3 571 Pfam PF03235 Protein of unknown function DUF262 16 242 3.4E-34 T 14-10-2018 IPR004919 Domain of unknown function DUF262 TMO_c0086 5f6ae5c523287cd452f0d124f689705b 211 Pfam PF01545 Cation efflux family 28 202 2.5E-12 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_c0086 5f6ae5c523287cd452f0d124f689705b 211 Gene3D G3DSA:1.20.1510.10 23 204 6.3E-10 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_c0086 5f6ae5c523287cd452f0d124f689705b 211 SUPERFAMILY SSF161111 23 202 6.54E-30 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 SMART SM00387 369 482 6.4E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 480 8.6E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 SMART SM00388 266 324 1.4E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 Pfam PF08521 Two-component sensor kinase N-terminal 27 177 8.2E-5 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 Gene3D G3DSA:3.30.565.10 329 480 1.5E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 SUPERFAMILY SSF55874 330 479 4.32E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 Gene3D G3DSA:1.10.287.130 212 324 2.0E-16 T 14-10-2018 TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 SUPERFAMILY SSF47384 249 322 4.71E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 3.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 3.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 3.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 438 3.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_2683 73aa11b150a183f2d0d04edcc24d35d3 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 322 9.6E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_a0501 18da7af934fb265231addc2f854743a8 284 SUPERFAMILY SSF54637 9 154 1.06E-38 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_a0501 18da7af934fb265231addc2f854743a8 284 Gene3D G3DSA:3.10.129.10 12 284 1.1E-84 T 14-10-2018 TMO_a0501 18da7af934fb265231addc2f854743a8 284 Pfam PF01575 MaoC like domain 165 271 6.9E-28 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_a0501 18da7af934fb265231addc2f854743a8 284 Pfam PF13452 N-terminal half of MaoC dehydratase 48 134 7.5E-10 T 14-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 TMO_a0501 18da7af934fb265231addc2f854743a8 284 SUPERFAMILY SSF54637 160 276 7.47E-31 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_c0648 64ea62398cfd377a7773c9a39702ad4b 340 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 301 3.0E-76 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_c0648 64ea62398cfd377a7773c9a39702ad4b 340 SUPERFAMILY SSF53686 1 321 3.8E-100 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_c0648 64ea62398cfd377a7773c9a39702ad4b 340 Gene3D G3DSA:3.40.50.1100 41 154 2.6E-116 T 14-10-2018 TMO_c0648 64ea62398cfd377a7773c9a39702ad4b 340 Gene3D G3DSA:3.40.50.1100 9 309 2.6E-116 T 14-10-2018 TMO_a0353 c8b60bd7688aa632a3cd9c4cb5aae426 308 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 16 267 7.3E-45 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system TMO_2779 86b11df100ea4865938e544367011750 243 PRINTS PR00123 ATP synthase A subunit signature 89 105 1.6E-30 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2779 86b11df100ea4865938e544367011750 243 PRINTS PR00123 ATP synthase A subunit signature 150 165 1.6E-30 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2779 86b11df100ea4865938e544367011750 243 PRINTS PR00123 ATP synthase A subunit signature 223 238 1.6E-30 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2779 86b11df100ea4865938e544367011750 243 PRINTS PR00123 ATP synthase A subunit signature 170 192 1.6E-30 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2779 86b11df100ea4865938e544367011750 243 SUPERFAMILY SSF81336 81 237 7.32E-52 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2779 86b11df100ea4865938e544367011750 243 ProSitePatterns PS00449 ATP synthase a subunit signature. 173 182 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2779 86b11df100ea4865938e544367011750 243 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 243 16.606 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2779 86b11df100ea4865938e544367011750 243 Gene3D G3DSA:1.20.120.220 81 243 2.4E-37 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2779 86b11df100ea4865938e544367011750 243 Pfam PF00119 ATP synthase A chain 33 236 1.0E-62 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2779 86b11df100ea4865938e544367011750 243 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 8 239 7.3E-74 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TMO_2472 eed4d3667f1f70e55c53f628870b314e 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 243 2.1E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2472 eed4d3667f1f70e55c53f628870b314e 259 SUPERFAMILY SSF161098 54 238 1.7E-25 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2472 eed4d3667f1f70e55c53f628870b314e 259 Gene3D G3DSA:1.10.3720.10 43 245 4.4E-20 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0176 bf8958528632d75e003b000d8f889d05 471 Gene3D G3DSA:3.90.1300.10 4 470 2.2E-137 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0176 bf8958528632d75e003b000d8f889d05 471 Pfam PF01425 Amidase 27 448 9.0E-104 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0176 bf8958528632d75e003b000d8f889d05 471 SUPERFAMILY SSF75304 5 467 2.35E-129 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_1408 4dfd821338f92b7da3b47d4a937812f6 411 SUPERFAMILY SSF89796 21 411 6.15E-129 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_1408 4dfd821338f92b7da3b47d4a937812f6 411 Gene3D G3DSA:3.40.50.10540 22 405 2.3E-125 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_1408 4dfd821338f92b7da3b47d4a937812f6 411 Gene3D G3DSA:3.30.1540.10 241 338 2.3E-125 T 14-10-2018 TMO_1408 4dfd821338f92b7da3b47d4a937812f6 411 Pfam PF02515 CoA-transferase family III 23 388 3.9E-120 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_3279 2da21f304bf2fff80c5497de4fdfa8b2 414 SUPERFAMILY SSF103473 24 408 1.83E-27 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_3279 2da21f304bf2fff80c5497de4fdfa8b2 414 Gene3D G3DSA:1.20.1250.20 224 411 5.2E-10 T 14-10-2018 TMO_3279 2da21f304bf2fff80c5497de4fdfa8b2 414 Gene3D G3DSA:1.20.1250.20 11 211 2.0E-8 T 14-10-2018 TMO_3279 2da21f304bf2fff80c5497de4fdfa8b2 414 Pfam PF07690 Major Facilitator Superfamily 43 381 1.3E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0230 21278c2b9ef26a7a546b0768bbb8f7fa 387 SUPERFAMILY SSF47323 167 321 3.71E-18 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TMO_0230 21278c2b9ef26a7a546b0768bbb8f7fa 387 Gene3D G3DSA:1.10.730.10 169 328 8.3E-14 T 14-10-2018 TMO_0230 21278c2b9ef26a7a546b0768bbb8f7fa 387 Pfam PF08264 Anticodon-binding domain of tRNA 192 321 1.1E-7 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TMO_a0249 965f4522a106c451ac47409deeac605d 339 Pfam PF01263 Aldose 1-epimerase 16 333 5.0E-70 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 TMO_a0249 965f4522a106c451ac47409deeac605d 339 PIRSF PIRSF005096 2 338 9.5E-90 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 TMO_a0249 965f4522a106c451ac47409deeac605d 339 SUPERFAMILY SSF74650 4 335 1.57E-96 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TMO_a0249 965f4522a106c451ac47409deeac605d 339 Gene3D G3DSA:2.70.98.10 2 336 8.2E-99 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TMO_2459 2959cc2f9fe726cc051668cfa20c256e 314 Gene3D G3DSA:1.10.10.10 1 84 2.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_2459 2959cc2f9fe726cc051668cfa20c256e 314 SUPERFAMILY SSF53850 92 294 8.69E-37 T 14-10-2018 TMO_2459 2959cc2f9fe726cc051668cfa20c256e 314 Pfam PF03466 LysR substrate binding domain 104 294 2.7E-24 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_2459 2959cc2f9fe726cc051668cfa20c256e 314 Gene3D G3DSA:3.40.190.10 95 290 1.5E-51 T 14-10-2018 TMO_2459 2959cc2f9fe726cc051668cfa20c256e 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.3E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_2459 2959cc2f9fe726cc051668cfa20c256e 314 Gene3D G3DSA:3.40.190.10 169 266 1.5E-51 T 14-10-2018 TMO_2459 2959cc2f9fe726cc051668cfa20c256e 314 SUPERFAMILY SSF46785 2 82 2.61E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 Gene3D G3DSA:3.40.50.720 3 243 2.2E-56 T 14-10-2018 TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.1E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.1E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.1E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 1.1E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.1E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 SUPERFAMILY SSF51735 11 240 7.69E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0163 6bece5e5ff0966fef8eb9e92f490ae10 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 240 1.1E-33 T 14-10-2018 TMO_0156 2513bfec7acdc0e8e853d3025783891b 206 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 19 121 1.6E-43 T 14-10-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 TMO_0156 2513bfec7acdc0e8e853d3025783891b 206 Pfam PF05233 PHB accumulation regulatory domain 82 121 1.1E-17 T 14-10-2018 IPR007897 PHB accumulation regulatory TMO_0156 2513bfec7acdc0e8e853d3025783891b 206 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 19 77 1.3E-28 T 14-10-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal TMO_0799 0f79068ed3fa9e4f82d8f5fec0d42dbc 157 SUPERFAMILY SSF55729 2 131 7.8E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_0799 0f79068ed3fa9e4f82d8f5fec0d42dbc 157 Pfam PF00583 Acetyltransferase (GNAT) family 24 140 1.7E-7 T 14-10-2018 IPR000182 GNAT domain TMO_0799 0f79068ed3fa9e4f82d8f5fec0d42dbc 157 Gene3D G3DSA:3.40.630.30 2 137 1.3E-18 T 14-10-2018 TMO_1257 07befdaf96f5520731be9122607f457f 358 Pfam PF15887 Putative zinc-binding metallo-peptidase 98 352 1.1E-110 T 14-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase TMO_1257 07befdaf96f5520731be9122607f457f 358 Pfam PF10005 zinc-ribbon domain 3 94 5.5E-34 T 14-10-2018 IPR011201 Zinc-ribbon domain, bacteria TMO_1257 07befdaf96f5520731be9122607f457f 358 PIRSF PIRSF012641 1 358 9.9E-154 T 14-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase TMO_a0463 49e68689286cb5485bd6bf4cd041b51c 284 Pfam PF12833 Helix-turn-helix domain 179 253 1.4E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0463 49e68689286cb5485bd6bf4cd041b51c 284 SMART SM00342 172 254 4.0E-6 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0463 49e68689286cb5485bd6bf4cd041b51c 284 Gene3D G3DSA:1.10.10.60 155 259 3.7E-13 T 14-10-2018 TMO_a0435 cb1fc76969d5183e1b9d3f55741bd36f 541 Pfam PF00732 GMC oxidoreductase 7 303 1.3E-83 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 TMO_a0435 cb1fc76969d5183e1b9d3f55741bd36f 541 PIRSF PIRSF000137 1 541 8.9E-147 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 TMO_a0435 cb1fc76969d5183e1b9d3f55741bd36f 541 SUPERFAMILY SSF54373 298 481 9.81E-58 T 14-10-2018 TMO_a0435 cb1fc76969d5183e1b9d3f55741bd36f 541 Gene3D G3DSA:3.50.50.60 7 537 3.3E-174 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0435 cb1fc76969d5183e1b9d3f55741bd36f 541 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 262 276 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 TMO_a0435 cb1fc76969d5183e1b9d3f55741bd36f 541 SUPERFAMILY SSF51905 6 539 5.0E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_a0435 cb1fc76969d5183e1b9d3f55741bd36f 541 Gene3D G3DSA:3.30.560.10 45 476 3.3E-174 T 14-10-2018 TMO_a0435 cb1fc76969d5183e1b9d3f55741bd36f 541 Pfam PF05199 GMC oxidoreductase 395 533 4.5E-34 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 TMO_b0205 7c398e24bc95de3c0c98563092f38881 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0205 7c398e24bc95de3c0c98563092f38881 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0205 7c398e24bc95de3c0c98563092f38881 182 SUPERFAMILY SSF46689 2 76 1.95E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_b0205 7c398e24bc95de3c0c98563092f38881 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 8.9E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_b0205 7c398e24bc95de3c0c98563092f38881 182 SUPERFAMILY SSF48498 77 160 1.11E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_b0205 7c398e24bc95de3c0c98563092f38881 182 Gene3D G3DSA:1.10.357.10 1 182 6.6E-47 T 14-10-2018 TMO_1420 fb7a49445ff6a199133fde766f177ffe 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 32 76 2.6E-7 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_1420 fb7a49445ff6a199133fde766f177ffe 305 SUPERFAMILY SSF161098 94 281 2.09E-25 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1420 fb7a49445ff6a199133fde766f177ffe 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 299 4.1E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1420 fb7a49445ff6a199133fde766f177ffe 305 Gene3D G3DSA:1.10.3720.10 88 296 2.4E-19 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0077 0b7c99709d21045df5e4a6b551653edd 280 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TMO_b0077 0b7c99709d21045df5e4a6b551653edd 280 SUPERFAMILY SSF52096 23 280 3.13E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_b0077 0b7c99709d21045df5e4a6b551653edd 280 Gene3D G3DSA:3.90.226.10 21 280 9.8E-75 T 14-10-2018 TMO_b0077 0b7c99709d21045df5e4a6b551653edd 280 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 4.0E-52 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_a0588 f706b50e74c133fc3ff020cbe559dd58 78 SUPERFAMILY SSF47336 5 75 4.45E-11 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0588 f706b50e74c133fc3ff020cbe559dd58 78 Gene3D G3DSA:1.10.1200.10 1 77 3.2E-21 T 14-10-2018 IPR036736 ACP-like superfamily TMO_a0588 f706b50e74c133fc3ff020cbe559dd58 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 72 0.009 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TMO_a0588 f706b50e74c133fc3ff020cbe559dd58 78 Pfam PF00550 Phosphopantetheine attachment site 6 70 3.2E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain TMO_c0933 d2c0d9a64d1646cea9ec12d5b9585956 80 SUPERFAMILY SSF54909 3 78 1.03E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_c0933 d2c0d9a64d1646cea9ec12d5b9585956 80 Pfam PF01037 Lrp/AsnC ligand binding domain 6 77 6.3E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_c0933 d2c0d9a64d1646cea9ec12d5b9585956 80 Gene3D G3DSA:3.30.70.920 4 79 8.9E-19 T 14-10-2018 TMO_3190 e6c5aee9869b3b7f602fccf9aea4ab9d 205 Gene3D G3DSA:1.10.760.10 28 167 6.2E-42 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_3190 e6c5aee9869b3b7f602fccf9aea4ab9d 205 SUPERFAMILY SSF46626 66 168 3.35E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_3190 e6c5aee9869b3b7f602fccf9aea4ab9d 205 PRINTS PR00604 Class IA and IB cytochrome C signature 121 137 1.7E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_3190 e6c5aee9869b3b7f602fccf9aea4ab9d 205 PRINTS PR00604 Class IA and IB cytochrome C signature 157 165 1.7E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_3190 e6c5aee9869b3b7f602fccf9aea4ab9d 205 PRINTS PR00604 Class IA and IB cytochrome C signature 78 85 1.7E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_3190 e6c5aee9869b3b7f602fccf9aea4ab9d 205 PRINTS PR00604 Class IA and IB cytochrome C signature 140 150 1.7E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_3190 e6c5aee9869b3b7f602fccf9aea4ab9d 205 PRINTS PR00604 Class IA and IB cytochrome C signature 91 106 1.7E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_3190 e6c5aee9869b3b7f602fccf9aea4ab9d 205 PRINTS PR00604 Class IA and IB cytochrome C signature 107 117 1.7E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_3190 e6c5aee9869b3b7f602fccf9aea4ab9d 205 Pfam PF00034 Cytochrome c 70 166 7.0E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_a0271 a504a33243de6612d54b2342fa2ce785 191 Gene3D G3DSA:1.10.10.60 5 51 1.2E-14 T 14-10-2018 TMO_a0271 a504a33243de6612d54b2342fa2ce785 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0271 a504a33243de6612d54b2342fa2ce785 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0271 a504a33243de6612d54b2342fa2ce785 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 1.3E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0271 a504a33243de6612d54b2342fa2ce785 191 Gene3D G3DSA:1.10.357.10 52 186 3.1E-35 T 14-10-2018 TMO_a0271 a504a33243de6612d54b2342fa2ce785 191 SUPERFAMILY SSF48498 81 186 2.14E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_a0271 a504a33243de6612d54b2342fa2ce785 191 SUPERFAMILY SSF46689 2 77 1.28E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0287 220dc53aa9eecd53fc81f529c6a0a80e 348 Gene3D G3DSA:3.20.20.100 1 342 1.2E-128 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_c0287 220dc53aa9eecd53fc81f529c6a0a80e 348 Pfam PF00248 Aldo/keto reductase family 15 319 6.0E-82 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_c0287 220dc53aa9eecd53fc81f529c6a0a80e 348 SUPERFAMILY SSF51430 1 319 1.44E-104 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_3483 d82df1501dab064f1a4c5759e7afe2f4 440 Pfam PF07804 HipA-like C-terminal domain 154 397 4.0E-52 T 14-10-2018 IPR012893 HipA-like, C-terminal TMO_3483 d82df1501dab064f1a4c5759e7afe2f4 440 Pfam PF13657 HipA N-terminal domain 10 109 1.4E-25 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 TMO_3483 d82df1501dab064f1a4c5759e7afe2f4 440 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 10 109 1.4E-27 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 TMO_0096 93e7fba7fe769d77fcd74f7f9001e0cf 302 Pfam PF05199 GMC oxidoreductase 165 289 1.4E-16 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 TMO_0096 93e7fba7fe769d77fcd74f7f9001e0cf 302 SUPERFAMILY SSF51905 1 299 6.11E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_0096 93e7fba7fe769d77fcd74f7f9001e0cf 302 Gene3D G3DSA:3.50.50.60 197 302 3.5E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_1202 90e95f2c85e501bd2eb77804cbe2671b 353 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 317 1.8E-36 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_1202 90e95f2c85e501bd2eb77804cbe2671b 353 Gene3D G3DSA:3.40.190.170 40 347 8.9E-74 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_c0573 e2f37b014c3eb49174b11fa0d1b66025 572 SUPERFAMILY SSF103473 15 568 8.11E-62 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0573 e2f37b014c3eb49174b11fa0d1b66025 572 Gene3D G3DSA:1.20.1250.20 443 571 2.4E-8 T 14-10-2018 TMO_c0573 e2f37b014c3eb49174b11fa0d1b66025 572 Gene3D G3DSA:1.20.1250.20 19 368 8.1E-57 T 14-10-2018 TMO_c0573 e2f37b014c3eb49174b11fa0d1b66025 572 Pfam PF00083 Sugar (and other) transporter 24 237 7.0E-28 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 TMO_c0573 e2f37b014c3eb49174b11fa0d1b66025 572 Pfam PF00083 Sugar (and other) transporter 459 569 1.2E-5 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 TMO_c0573 e2f37b014c3eb49174b11fa0d1b66025 572 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TMO_a0403 d744ecfa7c48488c0b753193324449e1 239 Gene3D G3DSA:3.40.50.300 3 239 1.2E-54 T 14-10-2018 TMO_a0403 d744ecfa7c48488c0b753193324449e1 239 SMART SM00382 32 216 1.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0403 d744ecfa7c48488c0b753193324449e1 239 Pfam PF00005 ABC transporter 23 167 5.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0403 d744ecfa7c48488c0b753193324449e1 239 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0403 d744ecfa7c48488c0b753193324449e1 239 SUPERFAMILY SSF52540 6 237 6.85E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0274 61dbacc18ff9fc5bf3003d4382c6b4ce 323 Gene3D G3DSA:3.40.50.720 102 289 5.7E-87 T 14-10-2018 TMO_0274 61dbacc18ff9fc5bf3003d4382c6b4ce 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 288 2.4E-40 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_0274 61dbacc18ff9fc5bf3003d4382c6b4ce 323 SUPERFAMILY SSF51735 105 288 8.64E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_0274 61dbacc18ff9fc5bf3003d4382c6b4ce 323 Gene3D G3DSA:3.40.50.720 26 323 5.7E-87 T 14-10-2018 TMO_a0364 038b1358987e6cd922d242d20676820b 564 Gene3D G3DSA:3.30.70.2230 268 433 3.2E-7 T 14-10-2018 TMO_c0652 99897e6ad1f8d5b1e7cd27a21e1f105b 428 Gene3D G3DSA:3.30.470.20 108 424 6.8E-54 T 14-10-2018 TMO_c0652 99897e6ad1f8d5b1e7cd27a21e1f105b 428 SUPERFAMILY SSF56059 113 328 9.19E-37 T 14-10-2018 TMO_c0652 99897e6ad1f8d5b1e7cd27a21e1f105b 428 Pfam PF13535 ATP-grasp domain 149 303 7.9E-15 T 14-10-2018 TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 299 398 1.5E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 SMART SM00388 189 255 2.5E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 Pfam PF00512 His Kinase A (phospho-acceptor) domain 191 248 8.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 SMART SM00387 298 411 7.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 388 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 Gene3D G3DSA:1.10.287.130 195 252 1.7E-36 T 14-10-2018 TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 SUPERFAMILY SSF47384 178 253 8.24E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 SUPERFAMILY SSF55781 31 172 7.06E-24 T 14-10-2018 TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 Pfam PF01590 GAF domain 31 157 1.1E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 SUPERFAMILY SSF55874 260 407 2.49E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 Gene3D G3DSA:3.30.450.40 9 174 1.2E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 Gene3D G3DSA:3.30.565.10 253 398 1.7E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TMO_b0303 9f68f318ac88979e600edbe7c09aecd3 412 SMART SM00065 26 170 9.8E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 TMO_c0549 fc0ab6fb78c666df129818f57ac7f718 445 Gene3D G3DSA:3.50.50.60 3 423 6.8E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0549 fc0ab6fb78c666df129818f57ac7f718 445 Gene3D G3DSA:1.10.3110.10 99 204 6.8E-37 T 14-10-2018 TMO_c0549 fc0ab6fb78c666df129818f57ac7f718 445 Gene3D G3DSA:3.90.660.20 38 394 6.8E-37 T 14-10-2018 TMO_c0549 fc0ab6fb78c666df129818f57ac7f718 445 Pfam PF01593 Flavin containing amine oxidoreductase 10 442 1.4E-30 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 TMO_c0549 fc0ab6fb78c666df129818f57ac7f718 445 SUPERFAMILY SSF51905 1 443 1.65E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TMO_c0557 bdc5ba54612906d1f0e00b442fba5de2 434 Pfam PF04261 Dyp-type peroxidase family 67 416 1.5E-91 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 TMO_c0557 bdc5ba54612906d1f0e00b442fba5de2 434 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 67 416 3.8E-84 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 TMO_c0557 bdc5ba54612906d1f0e00b442fba5de2 434 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 6 428 3.5E-139 T 14-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 TMO_c0557 bdc5ba54612906d1f0e00b442fba5de2 434 SUPERFAMILY SSF54909 60 418 1.16E-85 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_a0583 de6b29d22659052c49a4c93d0a4f4a8b 273 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 272 9.3E-49 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_a0583 de6b29d22659052c49a4c93d0a4f4a8b 273 Gene3D G3DSA:1.10.12.10 217 273 3.3E-13 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_a0583 de6b29d22659052c49a4c93d0a4f4a8b 273 SUPERFAMILY SSF52096 6 273 4.15E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0583 de6b29d22659052c49a4c93d0a4f4a8b 273 Gene3D G3DSA:3.90.226.10 1 212 7.6E-59 T 14-10-2018 TMO_b0399 73944ffdb4181c787f9109b1927c8d4b 152 Gene3D G3DSA:1.10.10.10 2 147 2.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0399 73944ffdb4181c787f9109b1927c8d4b 152 SMART SM00347 27 130 1.5E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_b0399 73944ffdb4181c787f9109b1927c8d4b 152 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_b0399 73944ffdb4181c787f9109b1927c8d4b 152 SUPERFAMILY SSF46785 6 126 7.06E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0399 73944ffdb4181c787f9109b1927c8d4b 152 Pfam PF01047 MarR family 38 95 2.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_b0399 73944ffdb4181c787f9109b1927c8d4b 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 7.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_b0399 73944ffdb4181c787f9109b1927c8d4b 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 7.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_b0399 73944ffdb4181c787f9109b1927c8d4b 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 7.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_3386 a482794272277984e3e4c8b753ef148e 390 Gene3D G3DSA:1.10.630.10 3 389 1.1E-58 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_3386 a482794272277984e3e4c8b753ef148e 390 SUPERFAMILY SSF48264 14 380 1.7E-38 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_3386 a482794272277984e3e4c8b753ef148e 390 PRINTS PR00359 B-class P450 signature 116 132 3.7E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_3386 a482794272277984e3e4c8b753ef148e 390 PRINTS PR00359 B-class P450 signature 252 263 3.7E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_3386 a482794272277984e3e4c8b753ef148e 390 PRINTS PR00359 B-class P450 signature 332 343 3.7E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_3386 a482794272277984e3e4c8b753ef148e 390 PRINTS PR00359 B-class P450 signature 133 148 3.7E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_3386 a482794272277984e3e4c8b753ef148e 390 PRINTS PR00359 B-class P450 signature 323 332 3.7E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_3386 a482794272277984e3e4c8b753ef148e 390 PRINTS PR00359 B-class P450 signature 175 197 3.7E-16 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_b0441 7d5eb8b868fedc922547599e7b8c9151 305 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 277 6.7E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_a0404 c4be56e6b1c65fee76b5e6767086b4ff 472 Pfam PF03972 MmgE/PrpD family 24 453 8.3E-88 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 TMO_a0404 c4be56e6b1c65fee76b5e6767086b4ff 472 Gene3D G3DSA:1.10.4100.10 44 430 3.2E-81 T 14-10-2018 TMO_a0404 c4be56e6b1c65fee76b5e6767086b4ff 472 Gene3D G3DSA:3.30.1330.120 282 413 3.2E-81 T 14-10-2018 TMO_a0404 c4be56e6b1c65fee76b5e6767086b4ff 472 SUPERFAMILY SSF103378 22 458 3.4E-87 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 TMO_1217 b8875a7967d213686db4687961907413 67 Pfam PF06945 Protein of unknown function (DUF1289) 5 52 1.4E-18 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 TMO_b0432 78e841cfceb4a00cc1c818945f88e873 260 Gene3D G3DSA:3.90.850.10 1 260 1.5E-71 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_b0432 78e841cfceb4a00cc1c818945f88e873 260 SUPERFAMILY SSF56529 3 260 9.94E-66 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_0910 d07e89a38ef5d4f0de16f92489815a1e 493 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 26 206 1.2E-39 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TMO_0910 d07e89a38ef5d4f0de16f92489815a1e 493 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 10 312 18.151 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TMO_0910 d07e89a38ef5d4f0de16f92489815a1e 493 Gene3D G3DSA:3.40.50.620 16 239 9.1E-55 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_0910 d07e89a38ef5d4f0de16f92489815a1e 493 Pfam PF01171 PP-loop family 26 205 2.1E-41 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 TMO_0910 d07e89a38ef5d4f0de16f92489815a1e 493 SUPERFAMILY SSF52402 19 205 6.4E-41 T 14-10-2018 TMO_b0316 362de235b2729ef033b7bdf7d4fd6ea9 145 Pfam PF07070 SpoOM protein 3 100 1.0E-17 T 14-10-2018 IPR009776 Sporulation stage 0, protein M TMO_a0294 8d45aae85cd26b5bc1e7becb57536856 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 28 44 1.5E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_a0294 8d45aae85cd26b5bc1e7becb57536856 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 335 350 1.5E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_a0294 8d45aae85cd26b5bc1e7becb57536856 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 50 66 1.5E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_a0294 8d45aae85cd26b5bc1e7becb57536856 379 SUPERFAMILY SSF53822 26 371 3.36E-75 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_a0294 8d45aae85cd26b5bc1e7becb57536856 379 Pfam PF13458 Periplasmic binding protein 27 368 7.4E-61 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_a0294 8d45aae85cd26b5bc1e7becb57536856 379 Gene3D G3DSA:3.40.50.2300 147 277 6.6E-74 T 14-10-2018 TMO_a0294 8d45aae85cd26b5bc1e7becb57536856 379 Gene3D G3DSA:3.40.50.2300 34 351 6.6E-74 T 14-10-2018 TMO_2493 f6fd88a77ff640fe0149c54c3fcdf50c 147 Pfam PF00472 RF-1 domain 15 141 1.2E-19 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TMO_2493 f6fd88a77ff640fe0149c54c3fcdf50c 147 Gene3D G3DSA:3.30.160.20 10 144 3.4E-33 T 14-10-2018 TMO_2493 f6fd88a77ff640fe0149c54c3fcdf50c 147 SUPERFAMILY SSF110916 15 108 3.01E-12 T 14-10-2018 TMO_b0076 13a4721ed3b80841c3276367ef96b875 527 Pfam PF00501 AMP-binding enzyme 26 421 1.3E-74 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_b0076 13a4721ed3b80841c3276367ef96b875 527 Gene3D G3DSA:3.30.300.310 418 518 3.6E-25 T 14-10-2018 TMO_b0076 13a4721ed3b80841c3276367ef96b875 527 Gene3D G3DSA:3.40.50.12780 15 414 3.4E-87 T 14-10-2018 TMO_b0076 13a4721ed3b80841c3276367ef96b875 527 SUPERFAMILY SSF56801 21 513 1.26E-118 T 14-10-2018 TMO_b0076 13a4721ed3b80841c3276367ef96b875 527 Pfam PF13193 AMP-binding enzyme C-terminal domain 430 505 2.5E-10 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_b0076 13a4721ed3b80841c3276367ef96b875 527 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_a0389 400bd236bf982c93ddb8451bf1a1e01e 389 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 376 1.1E-75 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_a0389 400bd236bf982c93ddb8451bf1a1e01e 389 PIRSF PIRSF006066 2 389 4.4E-75 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_c0906 0a2bcc8d9bda6d8ad0c0616004e3e304 317 SUPERFAMILY SSF103481 214 311 2.88E-12 T 14-10-2018 TMO_c0906 0a2bcc8d9bda6d8ad0c0616004e3e304 317 Pfam PF00892 EamA-like transporter family 177 305 1.5E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_c0906 0a2bcc8d9bda6d8ad0c0616004e3e304 317 Pfam PF00892 EamA-like transporter family 36 168 4.0E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_c0906 0a2bcc8d9bda6d8ad0c0616004e3e304 317 SUPERFAMILY SSF103481 80 171 3.92E-11 T 14-10-2018 TMO_0268 7d6418d2c212ef0d6ed0a4a564b42d4d 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 31 92 1.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0268 7d6418d2c212ef0d6ed0a4a564b42d4d 238 SUPERFAMILY SSF48008 99 234 1.65E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0268 7d6418d2c212ef0d6ed0a4a564b42d4d 238 SMART SM00345 34 92 4.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_0268 7d6418d2c212ef0d6ed0a4a564b42d4d 238 SMART SM00895 102 226 8.8E-15 T 14-10-2018 IPR011711 GntR, C-terminal TMO_0268 7d6418d2c212ef0d6ed0a4a564b42d4d 238 Gene3D G3DSA:1.10.10.10 16 93 2.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0268 7d6418d2c212ef0d6ed0a4a564b42d4d 238 Gene3D G3DSA:1.20.120.530 96 236 3.5E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_0268 7d6418d2c212ef0d6ed0a4a564b42d4d 238 SUPERFAMILY SSF46785 29 96 2.62E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0268 7d6418d2c212ef0d6ed0a4a564b42d4d 238 Pfam PF07729 FCD domain 102 224 2.3E-20 T 14-10-2018 IPR011711 GntR, C-terminal TMO_1093 a74197ca89cd795a48e21a52d4ccce3c 138 SUPERFAMILY SSF57716 97 136 1.14E-8 T 14-10-2018 TMO_1093 a74197ca89cd795a48e21a52d4ccce3c 138 Gene3D G3DSA:1.20.120.910 7 138 3.4E-36 T 14-10-2018 TMO_1093 a74197ca89cd795a48e21a52d4ccce3c 138 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 100 124 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site TMO_1093 a74197ca89cd795a48e21a52d4ccce3c 138 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 95 130 4.2E-9 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TMO_1093 a74197ca89cd795a48e21a52d4ccce3c 138 SUPERFAMILY SSF109635 3 96 8.76E-34 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily TMO_1093 a74197ca89cd795a48e21a52d4ccce3c 138 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 18 127 2.6E-42 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 TMO_1093 a74197ca89cd795a48e21a52d4ccce3c 138 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 14 136 27.742 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 TMO_c0237 22afa01d93173b16fcab17f39afa67c7 314 Pfam PF08478 POTRA domain, FtsQ-type 92 159 6.6E-16 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type TMO_c0237 22afa01d93173b16fcab17f39afa67c7 314 Gene3D G3DSA:3.10.20.310 91 158 2.8E-12 T 14-10-2018 TMO_c0237 22afa01d93173b16fcab17f39afa67c7 314 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 61 294 20.716 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 TMO_c0237 22afa01d93173b16fcab17f39afa67c7 314 Pfam PF03799 Cell division protein FtsQ 163 276 1.7E-13 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB TMO_1899 701973a53f45c69a0186cc1e2455188f 320 Pfam PF01545 Cation efflux family 12 218 1.2E-33 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_1899 701973a53f45c69a0186cc1e2455188f 320 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 300 1.6E-35 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_1899 701973a53f45c69a0186cc1e2455188f 320 Gene3D G3DSA:1.20.1510.10 7 219 7.8E-34 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_1899 701973a53f45c69a0186cc1e2455188f 320 SUPERFAMILY SSF161111 7 220 4.18E-40 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_b0206 e8f1aa72ea9d680c7ac60100f083eb20 343 Gene3D G3DSA:3.90.180.10 17 339 2.0E-93 T 14-10-2018 TMO_b0206 e8f1aa72ea9d680c7ac60100f083eb20 343 Gene3D G3DSA:3.40.50.720 146 291 2.0E-93 T 14-10-2018 TMO_b0206 e8f1aa72ea9d680c7ac60100f083eb20 343 SUPERFAMILY SSF51735 135 307 1.07E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0206 e8f1aa72ea9d680c7ac60100f083eb20 343 SUPERFAMILY SSF50129 9 340 1.02E-37 T 14-10-2018 IPR011032 GroES-like superfamily TMO_b0206 e8f1aa72ea9d680c7ac60100f083eb20 343 Pfam PF13602 Zinc-binding dehydrogenase 219 340 4.1E-25 T 14-10-2018 TMO_b0206 e8f1aa72ea9d680c7ac60100f083eb20 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 36 102 1.8E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_b0206 e8f1aa72ea9d680c7ac60100f083eb20 343 SMART SM00829 19 340 7.2E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_2487 81c88419f75bf3dc1e48bc46a463f85c 307 Gene3D G3DSA:3.40.50.11550 27 256 1.4E-25 T 14-10-2018 TMO_2487 81c88419f75bf3dc1e48bc46a463f85c 307 Gene3D G3DSA:1.10.8.760 142 207 1.4E-25 T 14-10-2018 TMO_2487 81c88419f75bf3dc1e48bc46a463f85c 307 SUPERFAMILY SSF159501 23 284 7.32E-52 T 14-10-2018 TMO_2487 81c88419f75bf3dc1e48bc46a463f85c 307 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 27 244 4.9E-48 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN TMO_0717 bc188ea809e7190c476708ec67abbe71 125 Pfam PF13586 Transposase DDE domain 36 117 3.1E-18 T 14-10-2018 IPR025668 Transposase DDE domain TMO_c0432 f07d58044d848f1747862e7651a334c6 614 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 277 1.9E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0432 f07d58044d848f1747862e7651a334c6 614 Pfam PF02653 Branched-chain amino acid transport system / permease component 335 593 1.1E-30 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2896 c1d6087f4ca41b063949ff908d14d732 199 Pfam PF03956 Lysine exporter LysO 9 197 2.0E-52 T 14-10-2018 IPR005642 Lysine exporter LysO TMO_2896 c1d6087f4ca41b063949ff908d14d732 199 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 35 193 2.0E-26 T 14-10-2018 IPR005642 Lysine exporter LysO TMO_2729 dc4b59eb4e38844b86f7ff49b8d44f55 249 Gene3D G3DSA:1.10.3720.10 26 222 4.8E-20 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2729 dc4b59eb4e38844b86f7ff49b8d44f55 249 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 221 4.2E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2729 dc4b59eb4e38844b86f7ff49b8d44f55 249 SUPERFAMILY SSF161098 25 213 1.19E-22 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0932 5f043d11ba2b54e8f350e36a18764ed6 395 SUPERFAMILY SSF53822 31 393 7.36E-88 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_c0932 5f043d11ba2b54e8f350e36a18764ed6 395 Gene3D G3DSA:3.40.50.2300 33 358 1.1E-96 T 14-10-2018 TMO_c0932 5f043d11ba2b54e8f350e36a18764ed6 395 Gene3D G3DSA:3.40.50.2300 149 364 1.1E-96 T 14-10-2018 TMO_c0932 5f043d11ba2b54e8f350e36a18764ed6 395 Pfam PF13458 Periplasmic binding protein 31 366 1.3E-76 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_a0298 07ca318e8ff185bd8efe1a7a82baadf3 231 Gene3D G3DSA:3.40.50.300 1 231 3.7E-57 T 14-10-2018 TMO_a0298 07ca318e8ff185bd8efe1a7a82baadf3 231 SMART SM00382 26 207 6.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0298 07ca318e8ff185bd8efe1a7a82baadf3 231 Pfam PF00005 ABC transporter 17 159 8.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0298 07ca318e8ff185bd8efe1a7a82baadf3 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0298 07ca318e8ff185bd8efe1a7a82baadf3 231 SUPERFAMILY SSF52540 2 224 1.41E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0043 72d4f758996b00d0b4fe222482d09b2d 119 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 16 119 1.1E-44 T 14-10-2018 IPR021356 Integrating conjugative element protein PFL4702 TMO_c0043 72d4f758996b00d0b4fe222482d09b2d 119 Pfam PF11190 Protein of unknown function (DUF2976) 32 118 1.5E-32 T 14-10-2018 IPR021356 Integrating conjugative element protein PFL4702 TMO_1275 cfacf30973ce4c4e3453dad4d22d86e4 226 Pfam PF11010 Protein of unknown function (DUF2848) 23 217 1.3E-79 T 14-10-2018 IPR021269 Protein of unknown function DUF2848 TMO_1275 cfacf30973ce4c4e3453dad4d22d86e4 226 SUPERFAMILY SSF56529 35 209 3.82E-9 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_0994 d99c5816ce18cd675b158c71585bf7a5 412 Gene3D G3DSA:3.40.50.2000 173 363 1.2E-42 T 14-10-2018 TMO_0994 d99c5816ce18cd675b158c71585bf7a5 412 Gene3D G3DSA:3.40.50.2000 102 377 1.2E-42 T 14-10-2018 TMO_0994 d99c5816ce18cd675b158c71585bf7a5 412 Pfam PF00534 Glycosyl transferases group 1 187 361 3.1E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 TMO_0994 d99c5816ce18cd675b158c71585bf7a5 412 SUPERFAMILY SSF53756 66 363 6.28E-53 T 14-10-2018 TMO_a0310 b62ecb817865081b20331bc2f81bbd7e 64 Gene3D G3DSA:2.40.50.140 1 63 2.6E-21 T 14-10-2018 TMO_a0310 b62ecb817865081b20331bc2f81bbd7e 64 SUPERFAMILY SSF50249 1 63 3.43E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_a0310 b62ecb817865081b20331bc2f81bbd7e 64 PIRSF PIRSF002599 1 64 1.2E-17 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 TMO_a0310 b62ecb817865081b20331bc2f81bbd7e 64 Pfam PF00313 'Cold-shock' DNA-binding domain 1 61 1.6E-20 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_a0310 b62ecb817865081b20331bc2f81bbd7e 64 SMART SM00357 1 64 1.2E-16 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 TMO_1342 4e56aade01fa853a02028f34bf6dd9fd 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 134 3.8E-22 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 TMO_1342 4e56aade01fa853a02028f34bf6dd9fd 137 Gene3D G3DSA:3.30.420.270 66 133 3.7E-6 T 14-10-2018 TMO_a0546 91a42322004fa9d9de208d44d3ae3ff1 289 SUPERFAMILY SSF52540 5 282 9.11E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0546 91a42322004fa9d9de208d44d3ae3ff1 289 Gene3D G3DSA:3.40.50.300 3 283 2.0E-34 T 14-10-2018 TMO_a0546 91a42322004fa9d9de208d44d3ae3ff1 289 Pfam PF00685 Sulfotransferase domain 6 251 1.4E-11 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 TMO_0758 c12ba6662436acffecefd6c039f9493c 116 SUPERFAMILY SSF55073 1 105 3.14E-20 T 14-10-2018 IPR029787 Nucleotide cyclase TMO_0758 c12ba6662436acffecefd6c039f9493c 116 Gene3D G3DSA:3.30.70.270 1 106 1.3E-23 T 14-10-2018 TMO_0758 c12ba6662436acffecefd6c039f9493c 116 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1 99 1.0E-17 T 14-10-2018 IPR000160 GGDEF domain TMO_0758 c12ba6662436acffecefd6c039f9493c 116 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1 103 6.6E-16 T 14-10-2018 IPR000160 GGDEF domain TMO_0758 c12ba6662436acffecefd6c039f9493c 116 SMART SM00267 1 104 8.8E-4 T 14-10-2018 IPR000160 GGDEF domain TMO_1804 3ec0491669ab954b24e99ec62a7a476e 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 429 5.9E-86 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_1804 3ec0491669ab954b24e99ec62a7a476e 435 PIRSF PIRSF006066 5 435 2.8E-81 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_1804 3ec0491669ab954b24e99ec62a7a476e 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 14 423 3.8E-79 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_1553 2fd8bd8ded22e8ee3b42a7946a1ddc22 285 SUPERFAMILY SSF48576 13 283 4.75E-46 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily TMO_1553 2fd8bd8ded22e8ee3b42a7946a1ddc22 285 Gene3D G3DSA:1.10.600.10 2 265 3.3E-31 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily TMO_1553 2fd8bd8ded22e8ee3b42a7946a1ddc22 285 Pfam PF00494 Squalene/phytoene synthase 24 269 7.1E-40 T 14-10-2018 TMO_d0050 f3d78555b9a7ae2bc4644c6dc75a2f62 252 Gene3D G3DSA:2.40.30.10 3 128 9.6E-32 T 14-10-2018 TMO_d0050 f3d78555b9a7ae2bc4644c6dc75a2f62 252 Gene3D G3DSA:3.40.50.80 131 252 4.0E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TMO_d0050 f3d78555b9a7ae2bc4644c6dc75a2f62 252 SUPERFAMILY SSF63380 8 131 5.88E-6 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TMO_d0050 f3d78555b9a7ae2bc4644c6dc75a2f62 252 Pfam PF04954 Siderophore-interacting protein 133 247 1.5E-23 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain TMO_d0050 f3d78555b9a7ae2bc4644c6dc75a2f62 252 Pfam PF08021 Siderophore-interacting FAD-binding domain 14 127 7.6E-22 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting TMO_0871 f99f8932a613745b1e89798313070ea7 76 Gene3D G3DSA:1.10.8.1250 10 75 9.7E-6 T 14-10-2018 IPR038296 Antitoxin ParD superfamily TMO_2289 51031da818f49a395b424edfe261abd5 331 SUPERFAMILY SSF81345 5 325 8.5E-64 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_2289 51031da818f49a395b424edfe261abd5 331 Pfam PF01032 FecCD transport family 13 324 1.6E-73 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_2289 51031da818f49a395b424edfe261abd5 331 Gene3D G3DSA:1.10.3470.10 2 330 2.0E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1410 6c347595a513ee7b46b2b690caefdf55 324 Gene3D G3DSA:3.40.50.1820 3 321 1.7E-89 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1410 6c347595a513ee7b46b2b690caefdf55 324 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 85 101 - T 14-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 TMO_1410 6c347595a513ee7b46b2b690caefdf55 324 SUPERFAMILY SSF53474 9 315 8.11E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_1410 6c347595a513ee7b46b2b690caefdf55 324 Pfam PF07859 alpha/beta hydrolase fold 85 293 1.6E-71 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 TMO_0495 c0c2fb7fff68322a1810d6e5ae923c06 231 Gene3D G3DSA:3.40.50.300 1 229 3.0E-57 T 14-10-2018 TMO_0495 c0c2fb7fff68322a1810d6e5ae923c06 231 SMART SM00382 26 199 2.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_0495 c0c2fb7fff68322a1810d6e5ae923c06 231 Pfam PF00005 ABC transporter 17 160 4.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_0495 c0c2fb7fff68322a1810d6e5ae923c06 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 5.0E-92 T 14-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE TMO_0495 c0c2fb7fff68322a1810d6e5ae923c06 231 SUPERFAMILY SSF52540 2 224 6.63E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_3157 b4555f8df29ea931a22a62b28f49eec2 240 Gene3D G3DSA:2.60.120.10 128 222 7.9E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_3157 b4555f8df29ea931a22a62b28f49eec2 240 Pfam PF12973 ChrR Cupin-like domain 135 217 3.3E-12 T 14-10-2018 IPR025979 ChrR-like cupin domain TMO_3157 b4555f8df29ea931a22a62b28f49eec2 240 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 11 239 5.6E-56 T 14-10-2018 IPR012807 Anti-sigma factor ChrR, putative TMO_3157 b4555f8df29ea931a22a62b28f49eec2 240 Gene3D G3DSA:1.10.10.1320 7 124 1.5E-28 T 14-10-2018 TMO_3157 b4555f8df29ea931a22a62b28f49eec2 240 SUPERFAMILY SSF51182 119 233 1.23E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_1441 04d3151dc8e9622b6f88dffd67cc02a9 149 PRINTS PR01837 MgtC/SapB protein signature 66 88 8.3E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_1441 04d3151dc8e9622b6f88dffd67cc02a9 149 PRINTS PR01837 MgtC/SapB protein signature 93 117 8.3E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_1441 04d3151dc8e9622b6f88dffd67cc02a9 149 PRINTS PR01837 MgtC/SapB protein signature 32 50 8.3E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_1441 04d3151dc8e9622b6f88dffd67cc02a9 149 PRINTS PR01837 MgtC/SapB protein signature 13 32 8.3E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_1441 04d3151dc8e9622b6f88dffd67cc02a9 149 Pfam PF02308 MgtC family 10 138 1.2E-26 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_1866 02e82c3684526acf193119eb37d88506 313 Pfam PF00698 Acyl transferase domain 5 278 3.0E-36 T 14-10-2018 IPR014043 Acyl transferase TMO_1866 02e82c3684526acf193119eb37d88506 313 Gene3D G3DSA:3.40.366.10 5 288 8.5E-95 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 TMO_1866 02e82c3684526acf193119eb37d88506 313 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 302 2.2E-38 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain TMO_1866 02e82c3684526acf193119eb37d88506 313 SUPERFAMILY SSF55048 131 200 6.54E-15 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding TMO_1866 02e82c3684526acf193119eb37d88506 313 SUPERFAMILY SSF52151 3 311 1.91E-73 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TMO_1866 02e82c3684526acf193119eb37d88506 313 PIRSF PIRSF000446 1 313 5.4E-92 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 TMO_1866 02e82c3684526acf193119eb37d88506 313 Gene3D G3DSA:3.30.70.250 130 202 8.5E-95 T 14-10-2018 TMO_1866 02e82c3684526acf193119eb37d88506 313 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 293 5.7E-95 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 TMO_b0443 e2baeff07fd6a779b4828eac30ef2828 255 SUPERFAMILY SSF52540 11 251 4.44E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0443 e2baeff07fd6a779b4828eac30ef2828 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 1.3E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_b0443 e2baeff07fd6a779b4828eac30ef2828 255 Pfam PF00005 ABC transporter 29 183 6.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0443 e2baeff07fd6a779b4828eac30ef2828 255 SMART SM00382 36 230 1.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0443 e2baeff07fd6a779b4828eac30ef2828 255 Gene3D G3DSA:3.40.50.300 10 255 7.5E-55 T 14-10-2018 TMO_3059 b831f686f4e6501a9f9a99b0cd3e6065 514 SUPERFAMILY SSF103473 7 405 9.42E-27 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_3059 b831f686f4e6501a9f9a99b0cd3e6065 514 Gene3D G3DSA:1.20.1250.20 3 187 1.7E-5 T 14-10-2018 TMO_3059 b831f686f4e6501a9f9a99b0cd3e6065 514 Gene3D G3DSA:1.20.1250.20 204 433 9.9E-16 T 14-10-2018 TMO_d0004 08cba76100a40d822932fd04844aba30 378 SUPERFAMILY SSF52317 67 244 1.73E-37 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_d0004 08cba76100a40d822932fd04844aba30 378 Pfam PF01965 DJ-1/PfpI family 65 226 1.8E-20 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_d0004 08cba76100a40d822932fd04844aba30 378 Gene3D G3DSA:3.40.50.880 43 272 4.5E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_2800 d23376a5023d8b95bd4ad75f7a05d6b4 275 Pfam PF09347 Domain of unknown function (DUF1989) 44 224 1.3E-61 T 14-10-2018 IPR018959 Protein of unknown function DUF1989 TMO_2800 d23376a5023d8b95bd4ad75f7a05d6b4 275 PIRSF PIRSF006487 1 247 8.7E-8 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TMO_2205 d0d8bd1427a4ffaf9ee05d65094a102f 95 SUPERFAMILY SSF46955 11 61 4.94E-9 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily TMO_2205 d0d8bd1427a4ffaf9ee05d65094a102f 95 Pfam PF12728 Helix-turn-helix domain 12 62 9.3E-7 T 14-10-2018 TMO_c0335 32a1b4a0394bcee81a7c98eac4d6dd24 567 Pfam PF02652 L-lactate permease 9 552 1.2E-100 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 TMO_2923 5a28a036d88c0dbfc1d04ba0010450f7 97 PIRSF PIRSF028291 3 97 2.0E-26 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 TMO_2923 5a28a036d88c0dbfc1d04ba0010450f7 97 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 7 93 1.4E-28 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 TMO_2923 5a28a036d88c0dbfc1d04ba0010450f7 97 Gene3D G3DSA:3.30.310.50 3 96 7.0E-28 T 14-10-2018 TMO_c0577 8b9be2c32bebf9f34e301b86d51a8023 110 Gene3D G3DSA:1.20.1270.360 1 110 5.5E-35 T 14-10-2018 TMO_1948 c58479ee2d6cffc02cf9dbfcf591978c 349 Pfam PF03601 Conserved hypothetical protein 698 21 330 3.0E-72 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 TMO_c0695 e884f7dfd237de8a73f4b54af045eaae 277 Gene3D G3DSA:3.40.50.150 15 242 9.6E-49 T 14-10-2018 TMO_c0695 e884f7dfd237de8a73f4b54af045eaae 277 Pfam PF08241 Methyltransferase domain 69 165 5.4E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TMO_c0695 e884f7dfd237de8a73f4b54af045eaae 277 SUPERFAMILY SSF53335 36 241 3.72E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_3494 dbc23be763588ef5fd21ba77b08781a8 281 SUPERFAMILY SSF53850 45 281 7.1E-67 T 14-10-2018 TMO_3494 dbc23be763588ef5fd21ba77b08781a8 281 Gene3D G3DSA:3.40.190.10 47 276 7.7E-78 T 14-10-2018 TMO_3494 dbc23be763588ef5fd21ba77b08781a8 281 PIRSF PIRSF002854 6 281 6.1E-86 T 14-10-2018 IPR004872 Lipoprotein NlpA family TMO_3494 dbc23be763588ef5fd21ba77b08781a8 281 Gene3D G3DSA:3.40.190.10 126 231 7.7E-78 T 14-10-2018 TMO_3494 dbc23be763588ef5fd21ba77b08781a8 281 Pfam PF03180 NLPA lipoprotein 45 281 1.0E-78 T 14-10-2018 IPR004872 Lipoprotein NlpA family TMO_2517 ca2dc418955f8ee946ee573f2baf065d 581 SUPERFAMILY SSF56235 110 214 3.7E-6 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_2517 ca2dc418955f8ee946ee573f2baf065d 581 Gene3D G3DSA:3.60.20.10 108 217 4.8E-7 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_b0277 438ea2057fdbdd2bdc147d7247ec4545 407 Pfam PF10783 Protein of unknown function (DUF2599) 311 404 1.4E-23 T 14-10-2018 IPR019719 Protein of unknown function DUF2599 TMO_2188 d0cfaf8d74161fa09259e8714b775112 242 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 18 223 6.8E-72 T 14-10-2018 IPR014142 P-type conjugative transfer protein TrbG TMO_2188 d0cfaf8d74161fa09259e8714b775112 242 Gene3D G3DSA:2.60.40.2500 141 238 2.2E-10 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily TMO_2188 d0cfaf8d74161fa09259e8714b775112 242 Pfam PF03524 Conjugal transfer protein 17 236 2.4E-62 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX TMO_1301 0d3e594892466e8a372fc47a1ad6d6b7 346 Pfam PF16220 Domain of unknown function (DUF4880) 22 59 2.7E-7 T 14-10-2018 IPR032623 FecR, N-terminal TMO_1301 0d3e594892466e8a372fc47a1ad6d6b7 346 PIRSF PIRSF018266 9 345 6.5E-68 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_1301 0d3e594892466e8a372fc47a1ad6d6b7 346 Pfam PF04773 FecR protein 144 233 6.9E-19 T 14-10-2018 IPR006860 FecR protein TMO_1301 0d3e594892466e8a372fc47a1ad6d6b7 346 Gene3D G3DSA:2.60.120.1440 140 268 7.9E-22 T 14-10-2018 TMO_2460 a7e1d6ea07daf93e38be9460fc733362 481 Gene3D G3DSA:1.20.1250.20 272 467 9.9E-17 T 14-10-2018 TMO_2460 a7e1d6ea07daf93e38be9460fc733362 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 405 424 3.0E-13 T 14-10-2018 TMO_2460 a7e1d6ea07daf93e38be9460fc733362 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 3.0E-13 T 14-10-2018 TMO_2460 a7e1d6ea07daf93e38be9460fc733362 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 3.0E-13 T 14-10-2018 TMO_2460 a7e1d6ea07daf93e38be9460fc733362 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 3.0E-13 T 14-10-2018 TMO_2460 a7e1d6ea07daf93e38be9460fc733362 481 Gene3D G3DSA:1.20.1720.10 18 254 4.3E-47 T 14-10-2018 TMO_2460 a7e1d6ea07daf93e38be9460fc733362 481 Pfam PF07690 Major Facilitator Superfamily 21 414 3.5E-53 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_2460 a7e1d6ea07daf93e38be9460fc733362 481 SUPERFAMILY SSF103473 8 464 4.58E-64 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2102 5ae04a6c3afe4aa1645974d1e44a2d2f 169 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 22 169 1.6E-49 T 14-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_2102 5ae04a6c3afe4aa1645974d1e44a2d2f 169 Pfam PF06754 Phosphonate metabolism protein PhnG 23 168 6.7E-51 T 14-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_1233 3cd11cb4fd699af3a3ea787109726917 316 Pfam PF12679 ABC-2 family transporter protein 12 313 6.9E-38 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 TMO_0721 777bd1c844855b4cdb699f1cf9d98314 119 SUPERFAMILY SSF55469 9 118 3.27E-18 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TMO_0721 777bd1c844855b4cdb699f1cf9d98314 119 Gene3D G3DSA:3.40.109.10 5 119 2.3E-17 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TMO_0721 777bd1c844855b4cdb699f1cf9d98314 119 Pfam PF00881 Nitroreductase family 11 97 2.3E-6 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TMO_0339 aa1493abd70a8dd8d0b9a1884bb220e9 111 Gene3D G3DSA:3.30.300.90 21 111 1.2E-30 T 14-10-2018 TMO_0339 aa1493abd70a8dd8d0b9a1884bb220e9 111 PIRSF PIRSF003113 4 111 5.4E-30 T 14-10-2018 IPR002634 BolA protein TMO_0339 aa1493abd70a8dd8d0b9a1884bb220e9 111 SUPERFAMILY SSF82657 15 110 5.75E-26 T 14-10-2018 IPR036065 BolA-like superfamily TMO_0339 aa1493abd70a8dd8d0b9a1884bb220e9 111 Pfam PF01722 BolA-like protein 30 107 3.2E-29 T 14-10-2018 IPR002634 BolA protein TMO_2226 e1acaf9d310b2b171d28a1a1e6ed9f5e 266 SUPERFAMILY SSF56219 12 265 2.36E-25 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TMO_2226 e1acaf9d310b2b171d28a1a1e6ed9f5e 266 Gene3D G3DSA:3.60.10.10 1 266 9.3E-24 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TMO_2226 e1acaf9d310b2b171d28a1a1e6ed9f5e 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 13 259 3.9E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TMO_2646 ab4db59f2307b38fb82de58d79a87873 65 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 8 62 3.0E-19 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 TMO_2646 ab4db59f2307b38fb82de58d79a87873 65 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 8 60 4.2E-19 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TMO_2646 ab4db59f2307b38fb82de58d79a87873 65 Gene3D G3DSA:1.20.5.1030 4 60 3.4E-15 T 14-10-2018 IPR038379 SecE superfamily TMO_2646 ab4db59f2307b38fb82de58d79a87873 65 Hamap MF_00422 Protein translocase subunit SecE [secE]. 4 59 11.903 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TMO_0036 97fead11548f7cc18742622f3fdb431e 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 5.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0036 97fead11548f7cc18742622f3fdb431e 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0036 97fead11548f7cc18742622f3fdb431e 202 SUPERFAMILY SSF46689 5 86 2.87E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0036 97fead11548f7cc18742622f3fdb431e 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 5.2E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_0036 97fead11548f7cc18742622f3fdb431e 202 Gene3D G3DSA:1.10.10.60 1 56 2.1E-17 T 14-10-2018 TMO_0036 97fead11548f7cc18742622f3fdb431e 202 Gene3D G3DSA:1.10.357.10 57 200 4.9E-11 T 14-10-2018 TMO_a0277 61f576e651eea7c7c38da970b261cb8a 361 ProSitePatterns PS00216 Sugar transport proteins signature 1. 34 50 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TMO_a0277 61f576e651eea7c7c38da970b261cb8a 361 Gene3D G3DSA:1.20.1250.20 1 347 1.6E-35 T 14-10-2018 TMO_a0277 61f576e651eea7c7c38da970b261cb8a 361 SUPERFAMILY SSF103473 2 348 4.84E-41 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_a0277 61f576e651eea7c7c38da970b261cb8a 361 Pfam PF07690 Major Facilitator Superfamily 3 314 4.9E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0137 dc7f211a0d2ab409bf91fd2ce0fbef74 204 SUPERFAMILY SSF110857 9 128 1.83E-13 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily TMO_0137 dc7f211a0d2ab409bf91fd2ce0fbef74 204 Pfam PF04752 ChaC-like protein 9 174 4.2E-44 T 14-10-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 KEGG: 00480+4.3.2.7|MetaCyc: PWY-7942|Reactome: R-HSA-174403 TMO_0137 dc7f211a0d2ab409bf91fd2ce0fbef74 204 Gene3D G3DSA:3.10.490.10 1 176 1.9E-11 T 14-10-2018 TMO_c0688 27914fad8d0264ac9b805eb85f6c0b35 174 Gene3D G3DSA:3.40.630.30 1 172 1.9E-57 T 14-10-2018 TMO_c0688 27914fad8d0264ac9b805eb85f6c0b35 174 SUPERFAMILY SSF55729 3 167 2.09E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_c0688 27914fad8d0264ac9b805eb85f6c0b35 174 Pfam PF13420 Acetyltransferase (GNAT) domain 3 157 5.2E-22 T 14-10-2018 TMO_0093 83d981eb8bd468ba9f158658c6d28009 139 SUPERFAMILY SSF88697 1 135 2.49E-53 T 14-10-2018 IPR015947 PUA-like superfamily TMO_0093 83d981eb8bd468ba9f158658c6d28009 139 Pfam PF01878 EVE domain 3 131 8.0E-47 T 14-10-2018 IPR002740 EVE domain TMO_0093 83d981eb8bd468ba9f158658c6d28009 139 Gene3D G3DSA:3.10.590.10 1 138 1.1E-51 T 14-10-2018 TMO_0413 6c2889c94938d35c24b1258db70bd1f9 157 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 150 1.2E-32 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TMO_0413 6c2889c94938d35c24b1258db70bd1f9 157 SMART SM00226 6 153 2.6E-37 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TMO_0413 6c2889c94938d35c24b1258db70bd1f9 157 Gene3D G3DSA:3.40.50.2300 1 157 8.2E-51 T 14-10-2018 TMO_0413 6c2889c94938d35c24b1258db70bd1f9 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 4.1E-21 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TMO_0413 6c2889c94938d35c24b1258db70bd1f9 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 4.1E-21 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TMO_0413 6c2889c94938d35c24b1258db70bd1f9 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 8 25 4.1E-21 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TMO_0413 6c2889c94938d35c24b1258db70bd1f9 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 4.1E-21 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TMO_0413 6c2889c94938d35c24b1258db70bd1f9 157 SUPERFAMILY SSF52788 4 154 2.88E-45 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily TMO_3087 6b4a03e6fa2b23c9007b6873cf469901 173 Pfam PF12802 MarR family 36 94 1.3E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_3087 6b4a03e6fa2b23c9007b6873cf469901 173 SUPERFAMILY SSF46785 14 142 5.24E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3087 6b4a03e6fa2b23c9007b6873cf469901 173 SMART SM00347 30 131 4.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_3087 6b4a03e6fa2b23c9007b6873cf469901 173 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_3087 6b4a03e6fa2b23c9007b6873cf469901 173 Gene3D G3DSA:1.10.10.10 16 147 5.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0488 7b192b40ca3431ae1eed17c2176b2382 113 Gene3D G3DSA:1.10.260.40 5 68 4.7E-18 T 14-10-2018 TMO_c0488 7b192b40ca3431ae1eed17c2176b2382 113 SUPERFAMILY SSF47413 3 69 4.22E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_c0488 7b192b40ca3431ae1eed17c2176b2382 113 Pfam PF01381 Helix-turn-helix 11 65 9.7E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0488 7b192b40ca3431ae1eed17c2176b2382 113 SMART SM00530 10 65 4.3E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_2910 e2eac305c8e69eae991e913570f4b700 371 Gene3D G3DSA:2.40.128.140 62 371 1.4E-93 T 14-10-2018 IPR037107 Putative outer membrane protein superfamily TMO_2910 e2eac305c8e69eae991e913570f4b700 371 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 77 369 6.8E-105 T 14-10-2018 IPR018707 Protein of unknown function DUF2219 TMO_c0170 f396c2ee317a589e27f7aa1904dc2672 269 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 97 266 1.5E-44 T 14-10-2018 IPR020051 SagB-type dehydrogenase domain TMO_c0170 f396c2ee317a589e27f7aa1904dc2672 269 SUPERFAMILY SSF55469 79 267 2.2E-24 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TMO_c0170 f396c2ee317a589e27f7aa1904dc2672 269 Pfam PF00881 Nitroreductase family 81 265 2.4E-22 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TMO_c0170 f396c2ee317a589e27f7aa1904dc2672 269 Gene3D G3DSA:3.40.109.10 44 269 1.5E-61 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TMO_2724 c6b5e938ac5b93ab1ec4980bea4a486a 512 SUPERFAMILY SSF53850 28 511 6.38E-132 T 14-10-2018 TMO_2724 c6b5e938ac5b93ab1ec4980bea4a486a 512 PIRSF PIRSF002741 3 508 2.2E-101 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_2724 c6b5e938ac5b93ab1ec4980bea4a486a 512 Gene3D G3DSA:3.90.76.10 65 179 1.5E-122 T 14-10-2018 TMO_2724 c6b5e938ac5b93ab1ec4980bea4a486a 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 432 4.3E-90 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_2724 c6b5e938ac5b93ab1ec4980bea4a486a 512 Gene3D G3DSA:3.10.105.10 281 491 1.5E-122 T 14-10-2018 TMO_2724 c6b5e938ac5b93ab1ec4980bea4a486a 512 Gene3D G3DSA:3.40.190.10 40 280 1.5E-122 T 14-10-2018 TMO_3354 424f48ba021ded7cd8c83813072a6e90 307 SUPERFAMILY SSF103481 51 149 1.83E-13 T 14-10-2018 TMO_3354 424f48ba021ded7cd8c83813072a6e90 307 Pfam PF00892 EamA-like transporter family 19 148 2.0E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3354 424f48ba021ded7cd8c83813072a6e90 307 Pfam PF00892 EamA-like transporter family 159 291 1.9E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_3354 424f48ba021ded7cd8c83813072a6e90 307 SUPERFAMILY SSF103481 218 293 9.55E-9 T 14-10-2018 TMO_c0497 560ac5eed740793f133907fbe6281ee0 259 SMART SM00382 33 228 1.3E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0497 560ac5eed740793f133907fbe6281ee0 259 Gene3D G3DSA:3.40.50.300 1 221 1.2E-70 T 14-10-2018 TMO_c0497 560ac5eed740793f133907fbe6281ee0 259 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0497 560ac5eed740793f133907fbe6281ee0 259 SUPERFAMILY SSF52540 4 231 2.26E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0497 560ac5eed740793f133907fbe6281ee0 259 Pfam PF00005 ABC transporter 24 163 1.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1165 39d4bd7597f2787d0421451f5083023b 185 SUPERFAMILY SSF46785 3 163 1.92E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1165 39d4bd7597f2787d0421451f5083023b 185 Gene3D G3DSA:1.10.10.10 1 86 1.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_1165 39d4bd7597f2787d0421451f5083023b 185 Pfam PF03551 Transcriptional regulator PadR-like family 8 80 7.3E-15 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal TMO_1165 39d4bd7597f2787d0421451f5083023b 185 Pfam PF10400 Virulence activator alpha C-term 92 157 1.7E-7 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal TMO_2838 12f9c1d12ecd8b78b18da249ae2f755a 463 Pfam PF01425 Amidase 26 451 1.5E-95 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_2838 12f9c1d12ecd8b78b18da249ae2f755a 463 SUPERFAMILY SSF75304 3 462 4.32E-124 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_2838 12f9c1d12ecd8b78b18da249ae2f755a 463 Gene3D G3DSA:3.90.1300.10 1 463 8.0E-131 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_a0417 7ae7fe86328211fb5868c011c9b1797a 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 304 5.7E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_1566 248bb1b5174316e601363c392b1b9500 213 Pfam PF00436 Single-strand binding protein family 5 107 4.0E-39 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 TMO_1566 248bb1b5174316e601363c392b1b9500 213 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 122 2.3E-44 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TMO_1566 248bb1b5174316e601363c392b1b9500 213 Gene3D G3DSA:2.40.50.140 2 115 6.7E-48 T 14-10-2018 TMO_1566 248bb1b5174316e601363c392b1b9500 213 SUPERFAMILY SSF50249 4 157 5.83E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold TMO_1566 248bb1b5174316e601363c392b1b9500 213 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 35.702 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TMO_3272 a93afc40188c72ffb379dd41efffd8ec 355 SUPERFAMILY SSF54637 4 152 6.31E-40 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_3272 a93afc40188c72ffb379dd41efffd8ec 355 PIRSF PIRSF021494 2 353 6.4E-134 T 14-10-2018 IPR016790 Thiol ester hydratase, Rv0216, predicted KEGG: 00630+4.2.1.148|KEGG: 00660+4.2.1.148|KEGG: 00720+4.2.1.148|MetaCyc: PWY-5741|MetaCyc: PWY-5744|MetaCyc: PWY-6728|MetaCyc: PWY-7854 TMO_3272 a93afc40188c72ffb379dd41efffd8ec 355 SUPERFAMILY SSF54637 193 355 8.14E-33 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_3272 a93afc40188c72ffb379dd41efffd8ec 355 Pfam PF01575 MaoC like domain 16 121 2.6E-7 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_3272 a93afc40188c72ffb379dd41efffd8ec 355 Gene3D G3DSA:3.10.129.10 2 355 1.6E-107 T 14-10-2018 TMO_c0355 46fd785174ad89ce733a5001e20f7e60 146 Gene3D G3DSA:1.10.10.10 1 146 6.9E-44 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0355 46fd785174ad89ce733a5001e20f7e60 146 SUPERFAMILY SSF46785 6 143 4.24E-39 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0355 46fd785174ad89ce733a5001e20f7e60 146 Pfam PF01638 HxlR-like helix-turn-helix 19 104 7.3E-19 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 Pfam PF00005 ABC transporter 30 187 3.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 SMART SM00382 38 237 4.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 SMART SM00382 314 505 3.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 SUPERFAMILY SSF52540 280 527 2.37E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 507 539 2.4E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 270 2.5E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 Gene3D G3DSA:3.40.50.300 9 277 2.3E-80 T 14-10-2018 TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 Gene3D G3DSA:3.40.50.300 278 560 1.6E-86 T 14-10-2018 TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 SUPERFAMILY SSF52540 10 260 3.8E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0341 99da67e5026f2d0ea6c6ff5a3574de2b 561 Pfam PF00005 ABC transporter 305 455 9.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0566 d97e765ba69bb4c48de31394f4e3d305 427 PIRSF PIRSF006066 1 426 3.6E-88 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0566 d97e765ba69bb4c48de31394f4e3d305 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 415 1.8E-86 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_b0566 d97e765ba69bb4c48de31394f4e3d305 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 421 5.0E-97 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_1322 f5ef9ebcda826ef9ac61a850c24d28c0 158 Gene3D G3DSA:3.40.630.30 1 157 2.7E-26 T 14-10-2018 TMO_1322 f5ef9ebcda826ef9ac61a850c24d28c0 158 SUPERFAMILY SSF55729 3 136 1.41E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_1322 f5ef9ebcda826ef9ac61a850c24d28c0 158 Pfam PF00583 Acetyltransferase (GNAT) family 36 131 3.5E-13 T 14-10-2018 IPR000182 GNAT domain TMO_3079 67bbd4bbc88a18bd40429aba941a8499 190 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 85 7.6E-51 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3079 67bbd4bbc88a18bd40429aba941a8499 190 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 6 26 7.6E-51 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3079 67bbd4bbc88a18bd40429aba941a8499 190 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 148 172 7.6E-51 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3079 67bbd4bbc88a18bd40429aba941a8499 190 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 44 64 7.6E-51 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3079 67bbd4bbc88a18bd40429aba941a8499 190 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 126 7.6E-51 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3079 67bbd4bbc88a18bd40429aba941a8499 190 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 1 171 6.6E-74 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3079 67bbd4bbc88a18bd40429aba941a8499 190 Pfam PF01578 Cytochrome C assembly protein 1 128 8.8E-28 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 TMO_c0583 394586867e529b0a5477e3e06eb95e41 145 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 8 137 8.2E-16 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 TMO_2345 3cdb989e64b9103c78c39473d7ec9c8b 270 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 10 268 8.7E-101 T 14-10-2018 IPR010247 N-formylglutamate deformylase TMO_2345 3cdb989e64b9103c78c39473d7ec9c8b 270 Pfam PF05013 N-formylglutamate amidohydrolase 19 240 1.9E-64 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase TMO_2345 3cdb989e64b9103c78c39473d7ec9c8b 270 SUPERFAMILY SSF53187 8 269 7.22E-76 T 14-10-2018 TMO_2345 3cdb989e64b9103c78c39473d7ec9c8b 270 Gene3D G3DSA:3.40.630.40 2 268 4.5E-68 T 14-10-2018 TMO_1392 b1e1c7d1bea4099c08dcae279393ad86 365 SMART SM00382 30 213 8.8E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1392 b1e1c7d1bea4099c08dcae279393ad86 365 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_1392 b1e1c7d1bea4099c08dcae279393ad86 365 Pfam PF00005 ABC transporter 22 163 4.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_1392 b1e1c7d1bea4099c08dcae279393ad86 365 Pfam PF08402 TOBE domain 280 362 1.4E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TMO_1392 b1e1c7d1bea4099c08dcae279393ad86 365 SUPERFAMILY SSF50331 239 362 5.67E-11 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TMO_1392 b1e1c7d1bea4099c08dcae279393ad86 365 Gene3D G3DSA:3.40.50.300 5 258 2.5E-74 T 14-10-2018 TMO_1392 b1e1c7d1bea4099c08dcae279393ad86 365 SUPERFAMILY SSF52540 5 243 4.19E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2047 1809087f401a8650d54101c2fdb6dff9 295 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 251 273 4.5E-10 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_2047 1809087f401a8650d54101c2fdb6dff9 295 SUPERFAMILY SSF52540 17 274 2.66E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2047 1809087f401a8650d54101c2fdb6dff9 295 SMART SM00382 43 251 7.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2047 1809087f401a8650d54101c2fdb6dff9 295 Gene3D G3DSA:3.40.50.300 4 278 6.5E-57 T 14-10-2018 TMO_2047 1809087f401a8650d54101c2fdb6dff9 295 Pfam PF00005 ABC transporter 35 201 4.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0116 28ac5f22bd0f8d14d922fcc454787b58 103 Gene3D G3DSA:3.30.2310.20 1 96 1.6E-19 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_a0116 28ac5f22bd0f8d14d922fcc454787b58 103 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 92 3.0E-11 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_1055 8756d215fd7ff2ecd11896709f80b21f 808 Pfam PF04738 Lantibiotic dehydratase, C terminus 102 418 3.0E-17 T 14-10-2018 IPR006827 Lantibiotic dehydratase, N-terminal TMO_1193 b008816eb813963fb59af16618372d28 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 290 9.9E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0281 b9b8fa08fe9f1533e0d12340f861bfd4 233 SUPERFAMILY SSF52317 43 228 1.86E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_c0281 b9b8fa08fe9f1533e0d12340f861bfd4 233 Pfam PF00117 Glutamine amidotransferase class-I 27 180 1.9E-18 T 14-10-2018 IPR017926 Glutamine amidotransferase TMO_c0281 b9b8fa08fe9f1533e0d12340f861bfd4 233 Gene3D G3DSA:3.40.50.880 2 230 1.7E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_b0283 8b7de92804c79c51ca836f20861d512e 84 SUPERFAMILY SSF47336 19 78 1.87E-5 T 14-10-2018 IPR036736 ACP-like superfamily TMO_b0283 8b7de92804c79c51ca836f20861d512e 84 Gene3D G3DSA:1.10.1200.10 10 82 1.1E-8 T 14-10-2018 IPR036736 ACP-like superfamily TMO_3122 eefa4197d1f7fe14c6129963dcaf44f5 160 SMART SM00953 24 147 3.5E-18 T 14-10-2018 IPR014914 RES domain TMO_3122 eefa4197d1f7fe14c6129963dcaf44f5 160 Pfam PF08808 RES domain 12 145 1.5E-20 T 14-10-2018 IPR014914 RES domain TMO_1819 6aca4d5183f42f267d1f0f920bbca816 197 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 41 182 21.187 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 TMO_1819 6aca4d5183f42f267d1f0f920bbca816 197 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 43 179 7.3E-40 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 TMO_1819 6aca4d5183f42f267d1f0f920bbca816 197 Gene3D G3DSA:1.10.940.10 38 186 1.5E-40 T 14-10-2018 IPR035926 NusB-like superfamily TMO_1819 6aca4d5183f42f267d1f0f920bbca816 197 SUPERFAMILY SSF48013 42 182 1.31E-35 T 14-10-2018 IPR035926 NusB-like superfamily TMO_1819 6aca4d5183f42f267d1f0f920bbca816 197 Pfam PF01029 NusB family 45 178 1.4E-33 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TMO_3207 3a9f1240704633b3aa4567b361d8c995 101 SUPERFAMILY SSF47598 17 92 3.72E-22 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_3207 3a9f1240704633b3aa4567b361d8c995 101 Gene3D G3DSA:1.20.5.780 13 99 1.2E-24 T 14-10-2018 TMO_3207 3a9f1240704633b3aa4567b361d8c995 101 Pfam PF08681 Protein of unknown function (DUF1778) 18 95 1.1E-24 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 TMO_b0385 1e3d6234758e7f46191fb8ecc9f675a6 473 SUPERFAMILY SSF75304 4 459 8.11E-122 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0385 1e3d6234758e7f46191fb8ecc9f675a6 473 Pfam PF01425 Amidase 27 450 8.5E-96 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0385 1e3d6234758e7f46191fb8ecc9f675a6 473 Gene3D G3DSA:3.90.1300.10 2 468 1.0E-131 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_3023 c9c62406217a7b4070f2eaec7f07621a 145 Pfam PF07386 Protein of unknown function (DUF1499) 37 137 8.0E-12 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 TMO_2876 b37d0f239a1461323e3c3c8e435638fc 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 9.3E-99 T 14-10-2018 IPR022522 Flagellar motor stator, MotA TMO_2876 b37d0f239a1461323e3c3c8e435638fc 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 131 219 4.3E-10 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TMO_2876 b37d0f239a1461323e3c3c8e435638fc 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site TMO_b0298 4f188389724fdb5e5819bdf70b902747 108 Gene3D G3DSA:3.30.2310.20 3 96 9.8E-27 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_b0298 4f188389724fdb5e5819bdf70b902747 108 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 92 3.9E-17 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_b0120 6942dcea8d1630dcd437db48738be15d 340 Pfam PF03060 Nitronate monooxygenase 87 311 2.8E-23 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_b0120 6942dcea8d1630dcd437db48738be15d 340 Gene3D G3DSA:3.20.20.70 13 322 2.5E-60 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_b0120 6942dcea8d1630dcd437db48738be15d 340 SUPERFAMILY SSF51412 13 296 1.47E-43 T 14-10-2018 TMO_0727 96d6861754c1a1bd70fe8433930dc6de 351 Pfam PF04235 Protein of unknown function (DUF418) 194 348 4.9E-17 T 14-10-2018 IPR007349 Domain of unknown function DUF418 TMO_a0563 b3daf69bca5e4e50ae8335ff1de9ec7a 594 Pfam PF01435 Peptidase family M48 102 270 1.3E-12 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_b0585 abd5a2060cc41d665f6c47aafb117b2f 325 Pfam PF04796 Plasmid encoded RepA protein 94 257 3.5E-47 T 14-10-2018 IPR006881 Plasmid encoded RepA protein TMO_b0095 93e90a1e31f72456b00f6e4fd2f9dc14 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 15 160 3.0E-29 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_a0087 9cb59982574ddc5d1bb6bd5d76b45256 466 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 24 456 1.6E-133 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath TMO_a0087 9cb59982574ddc5d1bb6bd5d76b45256 466 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 28 456 8.0E-153 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath TMO_c0329 8b2b6ff4acd0c578ea21302e098002ef 255 Pfam PF09836 Putative DNA-binding domain 6 100 7.1E-17 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria TMO_c0332 26ff4428a98dfe72c05430ac0a578036 426 Gene3D G3DSA:3.40.640.10 85 316 5.3E-127 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_c0332 26ff4428a98dfe72c05430ac0a578036 426 Pfam PF00155 Aminotransferase class I and II 72 406 1.8E-40 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_c0332 26ff4428a98dfe72c05430ac0a578036 426 SUPERFAMILY SSF53383 69 411 8.47E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_c0332 26ff4428a98dfe72c05430ac0a578036 426 Gene3D G3DSA:3.90.1150.10 57 406 5.3E-127 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_2948 c714305fbe5b4eb3f1c2d26e00389f99 198 Gene3D G3DSA:2.60.120.10 13 117 6.0E-54 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_2948 c714305fbe5b4eb3f1c2d26e00389f99 198 Gene3D G3DSA:2.60.120.10 10 176 6.0E-54 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_2948 c714305fbe5b4eb3f1c2d26e00389f99 198 Pfam PF05962 HutD 11 174 6.2E-56 T 14-10-2018 IPR010282 Uncharacterised protein family HutD/Ves TMO_2948 c714305fbe5b4eb3f1c2d26e00389f99 198 SUPERFAMILY SSF51182 3 173 2.7E-53 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_0310 2bacdfc7073ae48c94d73c8a209b32e7 164 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 6 160 2.1E-63 T 14-10-2018 IPR018681 Protein of unknown function DUF2165, transmembrane TMO_0340 277dce2b90683493f733efd52bccaae7 128 Pfam PF13467 Ribbon-helix-helix domain 6 68 1.3E-22 T 14-10-2018 IPR027373 Ribbon-helix-helix domain TMO_0340 277dce2b90683493f733efd52bccaae7 128 Gene3D G3DSA:1.10.3990.20 2 104 1.1E-13 T 14-10-2018 IPR038268 Ribbon-helix-helix domain superfamily TMO_1929 e44f868fdbecaef5b99f62a367c65721 195 Gene3D G3DSA:3.40.50.150 4 153 1.2E-12 T 14-10-2018 TMO_1929 e44f868fdbecaef5b99f62a367c65721 195 SUPERFAMILY SSF53335 22 186 2.79E-17 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0404 55be539689f708d1e4be59447bf949ed 213 PRINTS PR01011 Glutathione peroxidase family signature 69 86 3.1E-10 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TMO_0404 55be539689f708d1e4be59447bf949ed 213 PRINTS PR01011 Glutathione peroxidase family signature 104 120 3.1E-10 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TMO_0404 55be539689f708d1e4be59447bf949ed 213 PRINTS PR01011 Glutathione peroxidase family signature 167 176 3.1E-10 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TMO_0404 55be539689f708d1e4be59447bf949ed 213 Gene3D G3DSA:3.40.30.10 36 212 2.4E-49 T 14-10-2018 TMO_0404 55be539689f708d1e4be59447bf949ed 213 PIRSF PIRSF000303 23 209 6.5E-55 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TMO_0404 55be539689f708d1e4be59447bf949ed 213 Pfam PF00255 Glutathione peroxidase 52 157 2.8E-28 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TMO_0404 55be539689f708d1e4be59447bf949ed 213 SUPERFAMILY SSF52833 49 205 4.19E-50 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_0404 55be539689f708d1e4be59447bf949ed 213 ProSitePatterns PS00460 Glutathione peroxidases active site. 71 86 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 TMO_1518 920602c342485916ab4b8e32fae7b054 100 Gene3D G3DSA:3.90.330.10 15 74 4.3E-8 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_1518 920602c342485916ab4b8e32fae7b054 100 SUPERFAMILY SSF56209 6 65 4.71E-12 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_1873 694d7fd85e3c37584340e3a52ca37bde 527 Gene3D G3DSA:1.10.860.10 33 196 3.3E-39 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal TMO_1873 694d7fd85e3c37584340e3a52ca37bde 527 Gene3D G3DSA:3.40.50.300 199 519 4.3E-102 T 14-10-2018 TMO_1873 694d7fd85e3c37584340e3a52ca37bde 527 Pfam PF00772 DnaB-like helicase N terminal domain 38 139 1.9E-26 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 TMO_1873 694d7fd85e3c37584340e3a52ca37bde 527 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 38 512 1.5E-157 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 TMO_1873 694d7fd85e3c37584340e3a52ca37bde 527 SUPERFAMILY SSF52540 216 502 9.06E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1873 694d7fd85e3c37584340e3a52ca37bde 527 SUPERFAMILY SSF48024 36 147 3.01E-31 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 TMO_1873 694d7fd85e3c37584340e3a52ca37bde 527 Pfam PF03796 DnaB-like helicase C terminal domain 216 510 8.4E-103 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 7.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 7.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 18 183 0.006 T 14-10-2018 TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 Pfam PF00106 short chain dehydrogenase 19 210 2.8E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 Gene3D G3DSA:3.40.50.720 8 248 5.5E-64 T 14-10-2018 TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 SUPERFAMILY SSF51735 14 244 4.32E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 2.7E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 2.7E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 2.7E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 2.7E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_1880 1893f67dc524bcbd680fbe77f5f0095d 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 2.7E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_0962 ccbd7eb8bfb09056188d6ba9720d7106 363 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 7 160 5.2E-33 T 14-10-2018 IPR017516 AbrB duplication TMO_0962 ccbd7eb8bfb09056188d6ba9720d7106 363 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 197 351 2.7E-30 T 14-10-2018 IPR017516 AbrB duplication TMO_0962 ccbd7eb8bfb09056188d6ba9720d7106 363 PIRSF PIRSF038991 2 358 4.6E-71 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 TMO_0962 ccbd7eb8bfb09056188d6ba9720d7106 363 Pfam PF05145 Transition state regulatory protein AbrB 29 351 1.1E-78 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 TMO_0005 f48226265ae195a7eef1ff8d1410f581 69 Pfam PF01402 Ribbon-helix-helix protein, copG family 9 41 1.0E-5 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 TMO_c0750 a782e256e32e800d3382fdfc8b314904 239 Pfam PF00005 ABC transporter 19 163 4.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0750 a782e256e32e800d3382fdfc8b314904 239 Gene3D G3DSA:3.40.50.300 2 235 5.4E-60 T 14-10-2018 TMO_c0750 a782e256e32e800d3382fdfc8b314904 239 SMART SM00382 28 236 5.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0750 a782e256e32e800d3382fdfc8b314904 239 SUPERFAMILY SSF52540 3 231 6.07E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0750 a782e256e32e800d3382fdfc8b314904 239 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_3447 4d1699ab0b4d83d60d5a6839f5e13ac1 144 PIRSF PIRSF032162 1 138 5.3E-37 T 14-10-2018 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane TMO_3447 4d1699ab0b4d83d60d5a6839f5e13ac1 144 Pfam PF10003 Integral membrane protein (DUF2244) 1 130 5.9E-37 T 14-10-2018 IPR019253 Protein of unknown function DUF2244, transmembrane TMO_b0337 438a44e14ec708fe55234beffbb52492 103 Gene3D G3DSA:3.90.330.10 5 76 1.5E-5 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0337 438a44e14ec708fe55234beffbb52492 103 TIGRFAM TIGR03793 TOMM_pelo: NHLP leader peptide domain 5 78 2.0E-21 T 14-10-2018 IPR022513 Thiazole/oxazole-modified microcins TMO_b0337 438a44e14ec708fe55234beffbb52492 103 SUPERFAMILY SSF56209 5 80 9.29E-15 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_a0468 cc3f8d986b95dbd29654ee30c6162b13 552 SUPERFAMILY SSF56112 29 312 2.21E-17 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_a0468 cc3f8d986b95dbd29654ee30c6162b13 552 Gene3D G3DSA:3.40.50.300 350 520 2.6E-32 T 14-10-2018 TMO_a0468 cc3f8d986b95dbd29654ee30c6162b13 552 Pfam PF01636 Phosphotransferase enzyme family 127 284 6.8E-8 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase TMO_a0468 cc3f8d986b95dbd29654ee30c6162b13 552 Pfam PF13671 AAA domain 354 497 1.5E-22 T 14-10-2018 TMO_a0468 cc3f8d986b95dbd29654ee30c6162b13 552 SUPERFAMILY SSF52540 351 495 2.4E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2227 7b1529d2b2c02f39e7455c0854888753 319 PIRSF PIRSF037112 3 312 1.9E-107 T 14-10-2018 IPR017113 Antirestriction, ArdC TMO_2227 7b1529d2b2c02f39e7455c0854888753 319 Pfam PF08401 Domain of unknown function (DUF1738) 17 139 5.0E-40 T 14-10-2018 IPR013610 Domain of unknown function DUF1738 TMO_3013 70e56876623f95812674293522132e3c 222 Gene3D G3DSA:2.30.110.10 7 208 1.0E-38 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TMO_3013 70e56876623f95812674293522132e3c 222 SUPERFAMILY SSF50475 13 196 1.64E-24 T 14-10-2018 TMO_3013 70e56876623f95812674293522132e3c 222 Pfam PF04299 Putative FMN-binding domain 7 166 5.2E-28 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type TMO_3013 70e56876623f95812674293522132e3c 222 PIRSF PIRSF010372 7 210 1.1E-32 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type TMO_2192 b6055c988d8f8cd897b678f919161ccc 812 SUPERFAMILY SSF52540 398 748 8.18E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2192 b6055c988d8f8cd897b678f919161ccc 812 SMART SM00382 441 708 8.7E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2192 b6055c988d8f8cd897b678f919161ccc 812 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 182 389 6.4E-13 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 TMO_b0415 9ad99a695eafe00d0a65fa96e06f0be0 98 SUPERFAMILY SSF54909 1 95 8.72E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_b0415 9ad99a695eafe00d0a65fa96e06f0be0 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 7.8E-11 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain TMO_b0415 9ad99a695eafe00d0a65fa96e06f0be0 98 Gene3D G3DSA:3.30.70.100 1 96 1.3E-19 T 14-10-2018 TMO_1122 72359690bbba026404346fb33892698a 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 133 5.1E-13 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TMO_1122 72359690bbba026404346fb33892698a 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TMO_1122 72359690bbba026404346fb33892698a 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 135 3.8E-44 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 TMO_1252 6b6a0e6a26513eff05b7c1939c41c8af 272 SUPERFAMILY SSF110857 91 202 5.62E-9 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily TMO_1252 6b6a0e6a26513eff05b7c1939c41c8af 272 Pfam PF04752 ChaC-like protein 92 256 6.9E-36 T 14-10-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 KEGG: 00480+4.3.2.7|MetaCyc: PWY-7942|Reactome: R-HSA-174403 TMO_0203 6458ec6437ec8d61902215fb0295c937 427 Pfam PF07690 Major Facilitator Superfamily 35 377 2.5E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0203 6458ec6437ec8d61902215fb0295c937 427 Gene3D G3DSA:1.20.1250.20 18 414 4.3E-27 T 14-10-2018 TMO_0203 6458ec6437ec8d61902215fb0295c937 427 SUPERFAMILY SSF103473 21 412 1.7E-32 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_3381 5c9e95a1a039ca8235fd399353de3b10 290 Gene3D G3DSA:3.30.1370.110 143 290 1.5E-34 T 14-10-2018 TMO_3381 5c9e95a1a039ca8235fd399353de3b10 290 SUPERFAMILY SSF160443 176 217 6.28E-8 T 14-10-2018 IPR036063 Smr domain superfamily TMO_3381 5c9e95a1a039ca8235fd399353de3b10 290 Pfam PF01713 Smr domain 179 287 1.3E-17 T 14-10-2018 IPR002625 Smr domain TMO_1961 719b5ea3598895c77162e9d6e2aa8905 134 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 4 133 4.4E-50 T 14-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 TMO_1961 719b5ea3598895c77162e9d6e2aa8905 134 SUPERFAMILY SSF54593 1 133 1.61E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_1961 719b5ea3598895c77162e9d6e2aa8905 134 Gene3D G3DSA:3.10.180.10 1 134 5.5E-41 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_1961 719b5ea3598895c77162e9d6e2aa8905 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 117 4.1E-22 T 14-10-2018 TMO_c0478 c7fc7621054f90e079670357fcc91f27 461 PIRSF PIRSF000139 6 385 1.5E-108 T 14-10-2018 TMO_c0478 c7fc7621054f90e079670357fcc91f27 461 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_c0478 c7fc7621054f90e079670357fcc91f27 461 Pfam PF02754 Cysteine-rich domain 189 276 1.8E-10 T 14-10-2018 IPR004017 Cysteine-rich domain TMO_c0478 c7fc7621054f90e079670357fcc91f27 461 Pfam PF02754 Cysteine-rich domain 324 374 1.9E-5 T 14-10-2018 IPR004017 Cysteine-rich domain TMO_c0478 c7fc7621054f90e079670357fcc91f27 461 Gene3D G3DSA:1.10.1060.10 5 110 1.3E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_c0478 c7fc7621054f90e079670357fcc91f27 461 SUPERFAMILY SSF54862 17 116 1.8E-19 T 14-10-2018 TMO_c0478 c7fc7621054f90e079670357fcc91f27 461 Pfam PF13534 4Fe-4S dicluster domain 24 91 7.4E-11 T 14-10-2018 TMO_b0514 32e8bd575e0138fe139cc1e905553999 109 SUPERFAMILY SSF54427 3 103 3.76E-12 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_b0514 32e8bd575e0138fe139cc1e905553999 109 Gene3D G3DSA:3.10.450.50 1 107 1.6E-8 T 14-10-2018 TMO_3169 9527aa77a4f281e504b24ecda379160a 328 Pfam PF00682 HMGL-like 3 245 4.6E-29 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_3169 9527aa77a4f281e504b24ecda379160a 328 SUPERFAMILY SSF51569 3 248 4.94E-46 T 14-10-2018 TMO_3169 9527aa77a4f281e504b24ecda379160a 328 Gene3D G3DSA:3.20.20.70 1 261 1.3E-62 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_c0506 63973d45b31d707fdc07243d33986bdd 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0506 63973d45b31d707fdc07243d33986bdd 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0506 63973d45b31d707fdc07243d33986bdd 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0506 63973d45b31d707fdc07243d33986bdd 293 Gene3D G3DSA:3.40.190.10 99 264 2.9E-59 T 14-10-2018 TMO_c0506 63973d45b31d707fdc07243d33986bdd 293 Gene3D G3DSA:3.40.190.10 166 259 2.9E-59 T 14-10-2018 TMO_c0506 63973d45b31d707fdc07243d33986bdd 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.4E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_c0506 63973d45b31d707fdc07243d33986bdd 293 SUPERFAMILY SSF46785 6 115 3.52E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_c0506 63973d45b31d707fdc07243d33986bdd 293 Gene3D G3DSA:1.10.10.10 3 88 1.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0506 63973d45b31d707fdc07243d33986bdd 293 Pfam PF03466 LysR substrate binding domain 92 281 7.1E-30 T 14-10-2018 IPR005119 LysR, substrate-binding TMO_c0506 63973d45b31d707fdc07243d33986bdd 293 SUPERFAMILY SSF53850 92 286 1.71E-30 T 14-10-2018 TMO_3182 d00820f90f5696cd1600fc65628fb6f5 468 Gene3D G3DSA:3.40.630.10 139 464 1.7E-115 T 14-10-2018 TMO_3182 d00820f90f5696cd1600fc65628fb6f5 468 PRINTS PR00481 Cytosol aminopeptidase signature 308 328 4.9E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_3182 d00820f90f5696cd1600fc65628fb6f5 468 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 4.9E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_3182 d00820f90f5696cd1600fc65628fb6f5 468 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.9E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_3182 d00820f90f5696cd1600fc65628fb6f5 468 PRINTS PR00481 Cytosol aminopeptidase signature 336 351 4.9E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_3182 d00820f90f5696cd1600fc65628fb6f5 468 PRINTS PR00481 Cytosol aminopeptidase signature 227 244 4.9E-42 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_3182 d00820f90f5696cd1600fc65628fb6f5 468 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 155 456 2.3E-100 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TMO_3182 d00820f90f5696cd1600fc65628fb6f5 468 SUPERFAMILY SSF53187 147 463 8.16E-100 T 14-10-2018 TMO_3182 d00820f90f5696cd1600fc65628fb6f5 468 Gene3D G3DSA:3.40.220.10 6 136 1.8E-28 T 14-10-2018 TMO_2463 b349c512db3ddf892e10bc3281395357 342 Gene3D G3DSA:3.20.20.100 1 335 3.7E-114 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_2463 b349c512db3ddf892e10bc3281395357 342 SUPERFAMILY SSF51430 1 316 1.44E-93 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_2463 b349c512db3ddf892e10bc3281395357 342 Pfam PF00248 Aldo/keto reductase family 16 316 1.5E-68 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_c0184 82692b311233976d6894315b09dea29f 313 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 7 307 26.351 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 TMO_c0184 82692b311233976d6894315b09dea29f 313 SUPERFAMILY SSF53335 75 306 2.94E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0184 82692b311233976d6894315b09dea29f 313 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 84 307 5.3E-51 T 14-10-2018 TMO_c0184 82692b311233976d6894315b09dea29f 313 Gene3D G3DSA:3.40.50.150 101 312 2.8E-48 T 14-10-2018 TMO_b0003 f27ba2e454730ef393a735dceef41cd2 75 Gene3D G3DSA:3.10.350.10 4 75 7.3E-22 T 14-10-2018 IPR036779 LysM domain superfamily TMO_b0003 f27ba2e454730ef393a735dceef41cd2 75 Pfam PF05489 Phage Tail Protein X 5 59 2.8E-19 T 14-10-2018 IPR008861 Phage Tail Protein X-like TMO_3096 1b87d380b89133947bfe5015f16e58b3 402 Gene3D G3DSA:3.40.50.2300 47 359 1.0E-54 T 14-10-2018 TMO_3096 1b87d380b89133947bfe5015f16e58b3 402 Gene3D G3DSA:3.40.50.2300 168 297 1.0E-54 T 14-10-2018 TMO_3096 1b87d380b89133947bfe5015f16e58b3 402 SUPERFAMILY SSF53822 46 400 2.17E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_3096 1b87d380b89133947bfe5015f16e58b3 402 Pfam PF13458 Periplasmic binding protein 47 383 9.0E-44 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_2389 a71f111bef856be05655f9f44fb96d1d 200 Pfam PF09374 Predicted Peptidoglycan domain 127 195 8.1E-6 T 14-10-2018 IPR018537 Peptidoglycan binding domain TMO_2389 a71f111bef856be05655f9f44fb96d1d 200 Gene3D G3DSA:1.20.141.10 17 200 7.5E-31 T 14-10-2018 TMO_2389 a71f111bef856be05655f9f44fb96d1d 200 Pfam PF05838 Glycosyl hydrolase 108 28 122 3.1E-19 T 14-10-2018 IPR008565 Protein of unknown function DUF847 TMO_2389 a71f111bef856be05655f9f44fb96d1d 200 SUPERFAMILY SSF53955 19 197 1.01E-31 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_1032 ae72bd0dac40a43f2a6c547e53225ad4 289 SUPERFAMILY SSF161098 84 271 9.68E-23 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1032 ae72bd0dac40a43f2a6c547e53225ad4 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 287 1.3E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1032 ae72bd0dac40a43f2a6c547e53225ad4 289 Gene3D G3DSA:1.10.3720.10 78 285 9.1E-16 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1032 ae72bd0dac40a43f2a6c547e53225ad4 289 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 65 4.6E-5 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_0850 2e36a124f67700e931cc3fad35ab282c 472 SUPERFAMILY SSF48452 8 285 3.99E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_c0283 2aa603fc21f9d45ed0f7939c671d1de2 128 Pfam PF07883 Cupin domain 50 100 6.4E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_c0283 2aa603fc21f9d45ed0f7939c671d1de2 128 Gene3D G3DSA:2.60.120.10 25 118 3.1E-14 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_c0283 2aa603fc21f9d45ed0f7939c671d1de2 128 SUPERFAMILY SSF51182 31 112 3.67E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_1601 a69cf8270f24c5a2ab454079251fc300 327 SUPERFAMILY SSF51735 7 311 3.4E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1601 a69cf8270f24c5a2ab454079251fc300 327 Gene3D G3DSA:3.40.50.720 7 313 2.7E-34 T 14-10-2018 TMO_1601 a69cf8270f24c5a2ab454079251fc300 327 Pfam PF13460 NAD(P)H-binding 11 116 1.0E-12 T 14-10-2018 IPR016040 NAD(P)-binding domain TMO_a0319 2a10fc1683048188eee7aa28ecbdcf8d 367 SUPERFAMILY SSF51735 16 327 1.86E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0319 2a10fc1683048188eee7aa28ecbdcf8d 367 Gene3D G3DSA:3.40.50.720 18 331 8.6E-99 T 14-10-2018 TMO_a0319 2a10fc1683048188eee7aa28ecbdcf8d 367 Pfam PF16363 GDP-mannose 4,6 dehydratase 21 318 2.5E-48 T 14-10-2018 IPR016040 NAD(P)-binding domain TMO_0226 c8491b32b4bb1429fa811824efd0b991 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 14-10-2018 IPR020845 AMP-binding, conserved site TMO_0226 c8491b32b4bb1429fa811824efd0b991 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 509 1.8E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_0226 c8491b32b4bb1429fa811824efd0b991 522 Pfam PF00501 AMP-binding enzyme 30 426 2.9E-99 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_0226 c8491b32b4bb1429fa811824efd0b991 522 Gene3D G3DSA:3.40.50.12780 8 420 3.6E-108 T 14-10-2018 TMO_0226 c8491b32b4bb1429fa811824efd0b991 522 Gene3D G3DSA:3.30.300.30 421 521 1.3E-28 T 14-10-2018 TMO_0226 c8491b32b4bb1429fa811824efd0b991 522 SUPERFAMILY SSF56801 20 521 6.41E-142 T 14-10-2018 TMO_0082 0ab5528cc4e26df82a6c6ba2b123b2ec 465 Pfam PF07219 HemY protein N-terminus 26 131 2.0E-26 T 14-10-2018 IPR010817 HemY, N-terminal TMO_0082 0ab5528cc4e26df82a6c6ba2b123b2ec 465 SUPERFAMILY SSF48452 89 209 2.85E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_3428 c5798b9935ed85d08f45302fe76d540b 288 Gene3D G3DSA:3.40.50.150 90 232 8.1E-14 T 14-10-2018 TMO_3428 c5798b9935ed85d08f45302fe76d540b 288 Pfam PF13578 Methyltransferase domain 108 208 3.1E-10 T 14-10-2018 TMO_3428 c5798b9935ed85d08f45302fe76d540b 288 SUPERFAMILY SSF53335 81 230 3.33E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0439 919408869c8f6c417d46336903c24a1e 197 Pfam PF09335 SNARE associated Golgi protein 30 159 1.4E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein TMO_b0426 b0661bceacecac305f4f4b7b8a1bcafa 194 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 190 6.4E-33 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_b0426 b0661bceacecac305f4f4b7b8a1bcafa 194 SUPERFAMILY SSF53850 43 170 6.95E-5 T 14-10-2018 TMO_b0426 b0661bceacecac305f4f4b7b8a1bcafa 194 Gene3D G3DSA:3.40.190.170 27 193 2.7E-44 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_2484 53190ad22887b4550e6ce835b3eab19b 184 Pfam PF00583 Acetyltransferase (GNAT) family 54 151 1.7E-15 T 14-10-2018 IPR000182 GNAT domain TMO_2484 53190ad22887b4550e6ce835b3eab19b 184 Gene3D G3DSA:3.40.630.30 1 178 9.0E-35 T 14-10-2018 TMO_2484 53190ad22887b4550e6ce835b3eab19b 184 SUPERFAMILY SSF55729 2 170 6.65E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2077 93536f464142f7605985927b97917d23 1548 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1202 1548 3.3E-60 T 14-10-2018 IPR007452 Translocation and assembly module TamB TMO_2338 4cd01aacfce39c38d43f931272968318 200 Pfam PF02631 RecX family 54 171 1.1E-12 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 TMO_a0011 56fee53677776c7ac77a7b4c91dae8bb 350 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 19 323 5.4E-117 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 TMO_a0011 56fee53677776c7ac77a7b4c91dae8bb 350 Gene3D G3DSA:3.40.50.720 137 305 1.5E-121 T 14-10-2018 TMO_a0011 56fee53677776c7ac77a7b4c91dae8bb 350 Gene3D G3DSA:3.30.1780.10 28 343 1.5E-121 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 TMO_a0011 56fee53677776c7ac77a7b4c91dae8bb 350 PIRSF PIRSF001439 40 333 1.3E-54 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 TMO_a0011 56fee53677776c7ac77a7b4c91dae8bb 350 SUPERFAMILY SSF51735 14 348 1.02E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_1398 ad049ae6b84d7bf67ab6149d0b603463 223 SUPERFAMILY SSF159594 43 215 3.92E-35 T 14-10-2018 TMO_1398 ad049ae6b84d7bf67ab6149d0b603463 223 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 45 208 4.4E-18 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component TMO_1398 ad049ae6b84d7bf67ab6149d0b603463 223 Gene3D G3DSA:3.40.50.10610 36 221 1.6E-50 T 14-10-2018 TMO_2627 192b82a6afe918df2a43fc3347e7261b 126 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 24.756 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_2627 192b82a6afe918df2a43fc3347e7261b 126 Pfam PF00237 Ribosomal protein L22p/L17e 18 119 3.1E-31 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 TMO_2627 192b82a6afe918df2a43fc3347e7261b 126 Gene3D G3DSA:3.90.470.10 3 126 2.2E-40 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TMO_2627 192b82a6afe918df2a43fc3347e7261b 126 SUPERFAMILY SSF54843 6 124 1.96E-39 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TMO_2627 192b82a6afe918df2a43fc3347e7261b 126 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 18 119 3.3E-30 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_b0326 f1f4610240fb9f1ec0e897cb2bd841a7 343 SUPERFAMILY SSF55729 119 310 2.69E-63 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_b0326 f1f4610240fb9f1ec0e897cb2bd841a7 343 Pfam PF13523 Acetyltransferase (GNAT) domain 152 296 3.5E-56 T 14-10-2018 TMO_b0326 f1f4610240fb9f1ec0e897cb2bd841a7 343 SMART SM01006 148 195 1.2E-19 T 14-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain TMO_b0326 f1f4610240fb9f1ec0e897cb2bd841a7 343 Gene3D G3DSA:3.40.630.30 116 310 2.3E-69 T 14-10-2018 TMO_c0585 1c24a16ead52d29527fc39e170adb8e3 192 Pfam PF10973 Protein of unknown function (DUF2799) 45 131 1.8E-22 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 TMO_3421 1d7ea2ff8736c2dbdf9a7f03d0793559 172 Gene3D G3DSA:3.30.160.150 27 170 2.0E-40 T 14-10-2018 TMO_3421 1d7ea2ff8736c2dbdf9a7f03d0793559 172 Pfam PF04390 Lipopolysaccharide-assembly 37 162 8.6E-12 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 TMO_c0800 14716f8a3c1bf468682741f646d0155b 102 Pfam PF09413 Putative prokaryotic signal transducing protein 1 65 4.2E-16 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 TMO_c0800 14716f8a3c1bf468682741f646d0155b 102 Gene3D G3DSA:3.30.70.790 1 71 2.8E-25 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 TMO_c0800 14716f8a3c1bf468682741f646d0155b 102 SUPERFAMILY SSF54913 2 68 1.29E-16 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TMO_a0574 d71fc8304d7018f83923ca147c35eed4 144 Gene3D G3DSA:3.10.129.10 2 134 1.2E-26 T 14-10-2018 TMO_a0574 d71fc8304d7018f83923ca147c35eed4 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 17 130 9.2E-18 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TMO_a0574 d71fc8304d7018f83923ca147c35eed4 144 SUPERFAMILY SSF54637 11 137 4.53E-24 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_a0574 d71fc8304d7018f83923ca147c35eed4 144 Pfam PF03061 Thioesterase superfamily 50 123 6.6E-12 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TMO_1057 8121a36060d056779b3d3c2423636c77 305 SUPERFAMILY SSF51658 85 260 4.42E-8 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily TMO_1057 8121a36060d056779b3d3c2423636c77 305 Gene3D G3DSA:3.20.20.150 5 268 1.5E-46 T 14-10-2018 TMO_1057 8121a36060d056779b3d3c2423636c77 305 Pfam PF05114 Protein of unknown function (DUF692) 8 259 2.2E-44 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 TMO_1674 0cf1f6fcd1c9a97b13821d693103d849 383 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 84 382 1.9E-112 T 14-10-2018 IPR011970 Lytic murein transglycosylase TMO_1674 0cf1f6fcd1c9a97b13821d693103d849 383 SUPERFAMILY SSF53955 71 382 1.35E-98 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_1674 0cf1f6fcd1c9a97b13821d693103d849 383 Gene3D G3DSA:1.10.8.350 94 260 1.0E-88 T 14-10-2018 TMO_1674 0cf1f6fcd1c9a97b13821d693103d849 383 Pfam PF13406 Transglycosylase SLT domain 85 378 1.0E-108 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 TMO_1674 0cf1f6fcd1c9a97b13821d693103d849 383 Gene3D G3DSA:1.10.530.10 127 377 1.0E-88 T 14-10-2018 TMO_2801 0e673fafa116f92354cade280e46c3ae 216 Gene3D G3DSA:3.40.630.30 14 203 7.3E-44 T 14-10-2018 TMO_2801 0e673fafa116f92354cade280e46c3ae 216 Pfam PF13302 Acetyltransferase (GNAT) domain 19 174 4.4E-21 T 14-10-2018 IPR000182 GNAT domain TMO_2801 0e673fafa116f92354cade280e46c3ae 216 SUPERFAMILY SSF55729 12 198 2.61E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2662 590646bf10b9c6a9310b70bc80c2252c 146 Pfam PF12680 SnoaL-like domain 15 113 1.2E-12 T 14-10-2018 IPR037401 SnoaL-like domain TMO_2662 590646bf10b9c6a9310b70bc80c2252c 146 SUPERFAMILY SSF54427 9 137 8.25E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_2662 590646bf10b9c6a9310b70bc80c2252c 146 Gene3D G3DSA:3.10.450.50 10 125 1.2E-16 T 14-10-2018 TMO_c0021 745048534dbc0601d8b980050a8dccd8 409 Pfam PF02417 Chromate transporter 237 403 8.6E-30 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TMO_c0021 745048534dbc0601d8b980050a8dccd8 409 Pfam PF02417 Chromate transporter 21 186 4.0E-32 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TMO_c0021 745048534dbc0601d8b980050a8dccd8 409 TIGRFAM TIGR00937 2A51: chromate efflux transporter 26 402 3.6E-101 T 14-10-2018 IPR014047 Chromate transporter, long chain TMO_c0021 745048534dbc0601d8b980050a8dccd8 409 PIRSF PIRSF004810 2 408 1.7E-123 T 14-10-2018 IPR014047 Chromate transporter, long chain TMO_3193 e56a6a3a628e138df6f150c7c905a870 115 SUPERFAMILY SSF103481 15 114 1.16E-16 T 14-10-2018 TMO_3193 e56a6a3a628e138df6f150c7c905a870 115 Pfam PF00893 Small Multidrug Resistance protein 11 102 1.3E-28 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 TMO_3193 e56a6a3a628e138df6f150c7c905a870 115 Gene3D G3DSA:1.10.3730.20 10 114 1.7E-33 T 14-10-2018 TMO_a0070 8e9025b7a9d78c8c357d2a7c0cf0546b 550 Gene3D G3DSA:3.90.1580.10 95 306 3.6E-26 T 14-10-2018 TMO_a0070 8e9025b7a9d78c8c357d2a7c0cf0546b 550 Pfam PF03781 Sulfatase-modifying factor enzyme 1 125 273 3.5E-22 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TMO_a0070 8e9025b7a9d78c8c357d2a7c0cf0546b 550 SUPERFAMILY SSF56436 102 289 1.08E-27 T 14-10-2018 IPR016187 C-type lectin fold TMO_0694 ac1aae94ff144d5af449e11956819214 382 Gene3D G3DSA:3.30.1540.10 221 309 1.5E-118 T 14-10-2018 TMO_0694 ac1aae94ff144d5af449e11956819214 382 Gene3D G3DSA:3.40.50.10540 10 327 1.5E-118 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_0694 ac1aae94ff144d5af449e11956819214 382 SUPERFAMILY SSF89796 9 376 3.01E-114 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_0694 ac1aae94ff144d5af449e11956819214 382 Pfam PF02515 CoA-transferase family III 11 359 9.6E-89 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_c0366 c08dedc802ece39e00e1a8984483f810 133 Gene3D G3DSA:1.20.58.720 1 62 8.4E-29 T 14-10-2018 TMO_c0366 c08dedc802ece39e00e1a8984483f810 133 SMART SM00530 73 127 1.8E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0366 c08dedc802ece39e00e1a8984483f810 133 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 2 131 1.5E-60 T 14-10-2018 IPR032758 Antitoxin MqsA/HigA-2 TMO_c0366 c08dedc802ece39e00e1a8984483f810 133 Gene3D G3DSA:1.10.260.40 63 131 3.5E-21 T 14-10-2018 TMO_c0366 c08dedc802ece39e00e1a8984483f810 133 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 3 131 2.3E-45 T 14-10-2018 IPR022452 Antitoxin MqsA TMO_c0366 c08dedc802ece39e00e1a8984483f810 133 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 44 3.0E-14 T 14-10-2018 IPR022453 Zinc finger, MqsA-type TMO_c0366 c08dedc802ece39e00e1a8984483f810 133 SUPERFAMILY SSF47413 73 127 1.13E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_2833 5b23437e518647a29d22e1f70fb51df3 444 Gene3D G3DSA:3.40.50.2000 232 417 1.4E-60 T 14-10-2018 TMO_2833 5b23437e518647a29d22e1f70fb51df3 444 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 45 223 1.1E-50 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 TMO_2833 5b23437e518647a29d22e1f70fb51df3 444 Gene3D G3DSA:3.40.50.11720 48 224 2.9E-35 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 TMO_2153 c1ce07c3a69f276807d3103870bda9fa 335 SUPERFAMILY SSF52418 91 333 1.83E-49 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TMO_2153 c1ce07c3a69f276807d3103870bda9fa 335 SUPERFAMILY SSF47648 26 81 1.7E-12 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TMO_2153 c1ce07c3a69f276807d3103870bda9fa 335 Gene3D G3DSA:1.20.970.10 13 81 1.1E-18 T 14-10-2018 TMO_2153 c1ce07c3a69f276807d3103870bda9fa 335 Pfam PF00591 Glycosyl transferase family, a/b domain 112 262 5.4E-6 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TMO_2153 c1ce07c3a69f276807d3103870bda9fa 335 Pfam PF02885 Glycosyl transferase family, helical bundle domain 29 80 1.8E-13 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 TMO_2153 c1ce07c3a69f276807d3103870bda9fa 335 Gene3D G3DSA:3.40.1030.10 83 334 2.2E-59 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TMO_1182 16ed9fd0a8c9d158d51f3af3cd9d0a0a 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 5.1E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1182 16ed9fd0a8c9d158d51f3af3cd9d0a0a 312 Gene3D G3DSA:1.10.3720.10 85 299 7.8E-18 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1182 16ed9fd0a8c9d158d51f3af3cd9d0a0a 312 SUPERFAMILY SSF161098 90 286 1.11E-13 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1458 e3ec54e450342fb67a0e436a9553dd56 263 Pfam PF01925 Sulfite exporter TauE/SafE 12 260 2.0E-37 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_a0541 5df96a3a5ac46dab1798b33039f731eb 884 Gene3D G3DSA:3.30.160.280 826 884 1.9E-15 T 14-10-2018 TMO_a0541 5df96a3a5ac46dab1798b33039f731eb 884 Gene3D G3DSA:3.30.160.280 643 713 2.0E-17 T 14-10-2018 TMO_a0541 5df96a3a5ac46dab1798b33039f731eb 884 Pfam PF10462 Peptidase M66 163 455 7.0E-50 T 14-10-2018 IPR019503 Peptidase M66 domain GO:0004222 TMO_a0286 71713f20b1abf3557b22ec39b4f56628 104 Pfam PF07978 NIPSNAP 3 102 4.7E-31 T 14-10-2018 IPR012577 NIPSNAP TMO_a0286 71713f20b1abf3557b22ec39b4f56628 104 Gene3D G3DSA:3.30.70.100 1 104 8.4E-39 T 14-10-2018 TMO_a0286 71713f20b1abf3557b22ec39b4f56628 104 SUPERFAMILY SSF54909 1 103 1.9E-32 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_0476 d9e8ce70c2498f2d84e42612725cdcb4 182 SUPERFAMILY SSF46785 24 162 8.54E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0476 d9e8ce70c2498f2d84e42612725cdcb4 182 Pfam PF12802 MarR family 54 113 4.1E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0476 d9e8ce70c2498f2d84e42612725cdcb4 182 Gene3D G3DSA:1.10.10.10 5 165 4.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0476 d9e8ce70c2498f2d84e42612725cdcb4 182 SMART SM00347 49 149 1.8E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_2520 f376a272b5c5c90b95d1f654e3a28655 386 Pfam PF04932 O-Antigen ligase 163 318 1.6E-14 T 14-10-2018 IPR007016 O-antigen ligase-related TMO_0272 c67610f14bb1703be63a77542119788f 279 Gene3D G3DSA:1.10.3720.10 65 278 1.3E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0272 c67610f14bb1703be63a77542119788f 279 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 3 50 2.6E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_0272 c67610f14bb1703be63a77542119788f 279 SUPERFAMILY SSF161098 70 259 5.36E-32 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0272 c67610f14bb1703be63a77542119788f 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 275 3.6E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_a0189 fea9dc7b891fa0921c09d5f44d5aae22 537 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 506 2.1E-180 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 TMO_a0189 fea9dc7b891fa0921c09d5f44d5aae22 537 PIRSF PIRSF006446 359 526 4.0E-40 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 TMO_a0189 fea9dc7b891fa0921c09d5f44d5aae22 537 PIRSF PIRSF006446 1 327 9.3E-114 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 TMO_0735 1123a32eb57376de53396ce71b629443 181 Pfam PF13673 Acetyltransferase (GNAT) domain 47 150 3.8E-14 T 14-10-2018 IPR000182 GNAT domain TMO_0735 1123a32eb57376de53396ce71b629443 181 Gene3D G3DSA:3.40.630.30 2 177 3.0E-48 T 14-10-2018 TMO_0735 1123a32eb57376de53396ce71b629443 181 SUPERFAMILY SSF55729 13 164 4.09E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_b0552 50d87114196c0ad0be6f8cbf7767c87a 559 Pfam PF02538 Hydantoinase B/oxoprolinase 5 528 2.4E-161 T 14-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_0467 e38270a5769b92634edece09fd25b2aa 316 SUPERFAMILY SSF101756 79 137 6.41E-8 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily TMO_0467 e38270a5769b92634edece09fd25b2aa 316 Pfam PF13670 Peptidase propeptide and YPEB domain 258 312 1.5E-8 T 14-10-2018 IPR025711 PepSY domain TMO_0467 e38270a5769b92634edece09fd25b2aa 316 Pfam PF13670 Peptidase propeptide and YPEB domain 198 246 8.9E-6 T 14-10-2018 IPR025711 PepSY domain TMO_3555 e91118206673a782cb48fe2b0345ea93 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 308 3.8E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_3555 e91118206673a782cb48fe2b0345ea93 324 Gene3D G3DSA:3.40.50.1100 22 315 1.0E-122 T 14-10-2018 TMO_3555 e91118206673a782cb48fe2b0345ea93 324 SUPERFAMILY SSF53686 15 320 8.64E-101 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_3555 e91118206673a782cb48fe2b0345ea93 324 TIGRFAM TIGR01139 cysK: cysteine synthase A 22 320 1.4E-134 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 TMO_3555 e91118206673a782cb48fe2b0345ea93 324 TIGRFAM TIGR01136 cysKM: cysteine synthase 22 320 9.2E-131 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 TMO_3555 e91118206673a782cb48fe2b0345ea93 324 Gene3D G3DSA:3.40.50.1100 60 161 1.0E-122 T 14-10-2018 TMO_2693 4516b27f92134027adb0001568dbdc9c 199 SMART SM00493 79 164 8.1E-5 T 14-10-2018 IPR006171 TOPRIM domain TMO_2693 4516b27f92134027adb0001568dbdc9c 199 Gene3D G3DSA:3.40.1360.10 76 199 3.6E-39 T 14-10-2018 TMO_2693 4516b27f92134027adb0001568dbdc9c 199 SUPERFAMILY SSF111304 3 199 3.53E-66 T 14-10-2018 IPR023627 Recombination protein RecR TMO_2693 4516b27f92134027adb0001568dbdc9c 199 Gene3D G3DSA:1.10.8.420 2 52 2.0E-10 T 14-10-2018 TMO_2693 4516b27f92134027adb0001568dbdc9c 199 Pfam PF02132 RecR protein 40 77 2.4E-13 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger TMO_2693 4516b27f92134027adb0001568dbdc9c 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 6.7E-62 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TMO_2693 4516b27f92134027adb0001568dbdc9c 199 Pfam PF13662 Toprim domain 80 172 5.0E-22 T 14-10-2018 IPR006171 TOPRIM domain TMO_2693 4516b27f92134027adb0001568dbdc9c 199 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 TMO_2693 4516b27f92134027adb0001568dbdc9c 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 93.258 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TMO_c0941 ae1aa22ccfd7b7ab07ea6edccb183187 154 Gene3D G3DSA:2.30.38.10 1 48 2.6E-13 T 14-10-2018 TMO_c0941 ae1aa22ccfd7b7ab07ea6edccb183187 154 Pfam PF00501 AMP-binding enzyme 2 48 7.8E-13 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0941 ae1aa22ccfd7b7ab07ea6edccb183187 154 Pfam PF13193 AMP-binding enzyme C-terminal domain 57 138 2.8E-13 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_c0941 ae1aa22ccfd7b7ab07ea6edccb183187 154 SUPERFAMILY SSF56801 2 150 3.14E-44 T 14-10-2018 TMO_c0941 ae1aa22ccfd7b7ab07ea6edccb183187 154 Gene3D G3DSA:3.30.300.310 49 153 8.4E-26 T 14-10-2018 TMO_0369 f2cbfa561cc168ed97f1c9300f7b8a3e 335 Gene3D G3DSA:3.40.190.10 136 263 3.4E-55 T 14-10-2018 TMO_0369 f2cbfa561cc168ed97f1c9300f7b8a3e 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 333 1.1E-18 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 TMO_0369 f2cbfa561cc168ed97f1c9300f7b8a3e 335 SUPERFAMILY SSF53850 106 242 6.52E-6 T 14-10-2018 TMO_0369 f2cbfa561cc168ed97f1c9300f7b8a3e 335 Gene3D G3DSA:3.40.190.150 43 328 3.4E-55 T 14-10-2018 TMO_0369 f2cbfa561cc168ed97f1c9300f7b8a3e 335 PIRSF PIRSF017082 1 335 7.0E-70 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 TMO_3117 efc2cbf36d504434f0ba99fa3ad01b73 239 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 25 234 8.0E-61 T 14-10-2018 IPR006214 Bax inhibitor 1-related TMO_c0866 ea3764cdb38f7a96ebdcdebe7b8cd572 706 Gene3D G3DSA:2.170.130.10 32 171 1.0E-33 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_c0866 ea3764cdb38f7a96ebdcdebe7b8cd572 706 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 57 702 2.6E-110 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_c0866 ea3764cdb38f7a96ebdcdebe7b8cd572 706 SUPERFAMILY SSF56935 38 706 3.66E-130 T 14-10-2018 TMO_c0866 ea3764cdb38f7a96ebdcdebe7b8cd572 706 Pfam PF00593 TonB dependent receptor 235 705 3.5E-59 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_c0866 ea3764cdb38f7a96ebdcdebe7b8cd572 706 Gene3D G3DSA:2.40.170.20 172 706 2.7E-126 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_c0866 ea3764cdb38f7a96ebdcdebe7b8cd572 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 161 1.1E-20 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_0026 24b3edf9b78b6c756442dc7033b14c30 304 SMART SM00448 7 119 3.9E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0026 24b3edf9b78b6c756442dc7033b14c30 304 Pfam PF00072 Response regulator receiver domain 9 120 2.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TMO_0026 24b3edf9b78b6c756442dc7033b14c30 304 Gene3D G3DSA:3.40.50.12740 7 203 1.1E-39 T 14-10-2018 TMO_0026 24b3edf9b78b6c756442dc7033b14c30 304 SUPERFAMILY SSF52172 9 134 2.28E-35 T 14-10-2018 IPR011006 CheY-like superfamily TMO_1672 b9ea03ce2656d880d47530239516ab29 216 Pfam PF00872 Transposase, Mutator family 3 192 1.6E-66 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TMO_1812 557265aa5bce569ec8ec4f5df29b458f 61 SUPERFAMILY SSF57829 1 54 1.4E-24 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 TMO_1812 557265aa5bce569ec8ec4f5df29b458f 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 21.277 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1812 557265aa5bce569ec8ec4f5df29b458f 61 Pfam PF01783 Ribosomal L32p protein family 2 55 6.7E-30 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_1812 557265aa5bce569ec8ec4f5df29b458f 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.2E-28 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TMO_b0491 ce40958de32466eab6afe61f438cf556 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 291 6.6E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0491 ce40958de32466eab6afe61f438cf556 294 Gene3D G3DSA:1.10.3720.10 80 285 1.5E-23 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0491 ce40958de32466eab6afe61f438cf556 294 SUPERFAMILY SSF161098 85 272 1.26E-25 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0160 d0e0e43abc5fee03bc61968fe7dd0254 329 SUPERFAMILY SSF53822 43 290 6.2E-21 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_0160 d0e0e43abc5fee03bc61968fe7dd0254 329 Pfam PF04392 ABC transporter substrate binding protein 36 327 3.4E-109 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein TMO_0160 d0e0e43abc5fee03bc61968fe7dd0254 329 Gene3D G3DSA:3.40.50.2300 150 321 4.4E-98 T 14-10-2018 TMO_0160 d0e0e43abc5fee03bc61968fe7dd0254 329 Gene3D G3DSA:3.40.50.2300 53 299 4.4E-98 T 14-10-2018 TMO_0636 7d64f664c5a531025fb23696915a29bc 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 272 8.0E-29 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_0842 177cf44b25d3ef2bf047858c179df444 60 Pfam PF09722 Protein of unknown function (DUF2384) 8 55 2.0E-10 T 14-10-2018 IPR024467 Domain of unknown function DUF2384 TMO_1574 85cba8000076697158fec31a0027310d 573 SUPERFAMILY SSF56801 18 548 2.22E-129 T 14-10-2018 TMO_1574 85cba8000076697158fec31a0027310d 573 Pfam PF00501 AMP-binding enzyme 51 452 2.2E-71 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_1574 85cba8000076697158fec31a0027310d 573 Gene3D G3DSA:3.30.300.310 448 552 2.8E-22 T 14-10-2018 TMO_1574 85cba8000076697158fec31a0027310d 573 Gene3D G3DSA:3.40.50.12780 10 446 3.6E-109 T 14-10-2018 TMO_1574 85cba8000076697158fec31a0027310d 573 Pfam PF13193 AMP-binding enzyme C-terminal domain 461 539 7.3E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TMO_a0359 85e3ad1eb3a50e058565a4d789a8957d 409 Pfam PF13166 AAA domain 144 355 2.2E-10 T 14-10-2018 IPR026866 Protein CR006, P-loop domain TMO_a0359 85e3ad1eb3a50e058565a4d789a8957d 409 SUPERFAMILY SSF52540 5 258 2.12E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0490 57984549b896ed658e7b90a3b69b1e96 228 SUPERFAMILY SSF48317 12 219 1.83E-39 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily TMO_b0490 57984549b896ed658e7b90a3b69b1e96 228 Pfam PF01569 PAP2 superfamily 103 219 1.8E-24 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TMO_b0490 57984549b896ed658e7b90a3b69b1e96 228 Gene3D G3DSA:1.20.144.10 130 228 4.5E-24 T 14-10-2018 TMO_b0490 57984549b896ed658e7b90a3b69b1e96 228 SMART SM00014 102 216 5.4E-22 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TMO_c0229 3fd92ac8ff2aacdefe34fa61d31f5bbd 161 Pfam PF01575 MaoC like domain 21 123 1.6E-20 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_c0229 3fd92ac8ff2aacdefe34fa61d31f5bbd 161 SUPERFAMILY SSF54637 12 157 5.98E-39 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_c0229 3fd92ac8ff2aacdefe34fa61d31f5bbd 161 Gene3D G3DSA:3.10.129.10 3 157 3.1E-49 T 14-10-2018 TMO_a0160 b86abd54ceb71cf0eab58d250644010e 156 SUPERFAMILY SSF54637 1 147 9.35E-46 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_a0160 b86abd54ceb71cf0eab58d250644010e 156 Pfam PF01575 MaoC like domain 10 115 7.9E-22 T 14-10-2018 IPR002539 MaoC-like dehydratase domain TMO_a0160 b86abd54ceb71cf0eab58d250644010e 156 Gene3D G3DSA:3.10.129.10 1 149 5.1E-51 T 14-10-2018 TMO_0821 50397616871e7c34cdf1917caf53c0a5 68 Pfam PF09827 CRISPR associated protein Cas2 3 49 1.5E-6 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 TMO_0821 50397616871e7c34cdf1917caf53c0a5 68 Gene3D G3DSA:3.30.70.240 1 68 1.4E-15 T 14-10-2018 TMO_1299 4d6360b6ee8d29ed6771532541e28b7a 601 SUPERFAMILY SSF102405 19 191 1.56E-8 T 14-10-2018 TMO_c0700 859c54c6fa91b75fa4f3ae278a878276 352 Gene3D G3DSA:3.40.50.1820 72 340 3.0E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0700 859c54c6fa91b75fa4f3ae278a878276 352 Pfam PF12146 Serine aminopeptidase, S33 110 202 3.2E-13 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 TMO_c0700 859c54c6fa91b75fa4f3ae278a878276 352 SUPERFAMILY SSF53474 77 316 4.19E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3201 e14b66adcc9f1d86c49de221a5e6d0f7 419 Pfam PF02515 CoA-transferase family III 13 386 1.6E-100 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 TMO_3201 e14b66adcc9f1d86c49de221a5e6d0f7 419 Gene3D G3DSA:3.30.1540.10 231 330 2.9E-106 T 14-10-2018 TMO_3201 e14b66adcc9f1d86c49de221a5e6d0f7 419 Gene3D G3DSA:3.40.50.10540 12 402 2.9E-106 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_3201 e14b66adcc9f1d86c49de221a5e6d0f7 419 SUPERFAMILY SSF89796 10 410 2.49E-110 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily TMO_b0186 e42a48d9040957802952c38a52d5468a 404 Gene3D G3DSA:3.40.50.2300 149 367 6.7E-98 T 14-10-2018 TMO_b0186 e42a48d9040957802952c38a52d5468a 404 Gene3D G3DSA:3.40.50.2300 53 360 6.7E-98 T 14-10-2018 TMO_b0186 e42a48d9040957802952c38a52d5468a 404 Pfam PF13458 Periplasmic binding protein 30 367 1.3E-75 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_b0186 e42a48d9040957802952c38a52d5468a 404 SUPERFAMILY SSF53822 30 402 1.18E-76 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_c0916 b58aacfae6db1357e1e64ee977a29e8c 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 13 137 7.3E-32 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_2101 bf70e76828a89cb0b7475af2f3568032 209 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 19 204 5.8E-56 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 TMO_2101 bf70e76828a89cb0b7475af2f3568032 209 SUPERFAMILY SSF159709 26 205 1.57E-54 T 14-10-2018 IPR038058 PhnH-like superfamily TMO_2101 bf70e76828a89cb0b7475af2f3568032 209 Gene3D G3DSA:3.40.50.11310 14 206 2.9E-60 T 14-10-2018 IPR038058 PhnH-like superfamily TMO_2101 bf70e76828a89cb0b7475af2f3568032 209 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 18 205 2.1E-62 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 TMO_2101 bf70e76828a89cb0b7475af2f3568032 209 PIRSF PIRSF020680 11 209 1.3E-61 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 TMO_c0880 8c949b20bc846bf88f0b71fcd648ddf7 257 SMART SM00382 32 215 1.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_c0880 8c949b20bc846bf88f0b71fcd648ddf7 257 SUPERFAMILY SSF52540 5 221 4.5E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0880 8c949b20bc846bf88f0b71fcd648ddf7 257 Pfam PF00005 ABC transporter 23 164 1.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_c0880 8c949b20bc846bf88f0b71fcd648ddf7 257 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_c0880 8c949b20bc846bf88f0b71fcd648ddf7 257 Gene3D G3DSA:3.40.50.300 2 248 9.6E-62 T 14-10-2018 TMO_1076 f8345a2289d655e24f7d30c9efaf302c 140 Pfam PF03646 FlaG protein 54 137 7.4E-13 T 14-10-2018 IPR005186 FlaG protein TMO_1076 f8345a2289d655e24f7d30c9efaf302c 140 Gene3D G3DSA:3.30.160.170 45 136 9.5E-11 T 14-10-2018 IPR035924 FlaG-like superfamily TMO_1076 f8345a2289d655e24f7d30c9efaf302c 140 SUPERFAMILY SSF160214 67 139 3.27E-14 T 14-10-2018 IPR035924 FlaG-like superfamily TMO_1195 cde64cfab16ff7b6891fb6e9c033962f 369 Gene3D G3DSA:3.40.50.2300 147 366 9.1E-107 T 14-10-2018 TMO_1195 cde64cfab16ff7b6891fb6e9c033962f 369 Gene3D G3DSA:3.40.50.2300 41 301 9.1E-107 T 14-10-2018 TMO_1195 cde64cfab16ff7b6891fb6e9c033962f 369 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 39 303 5.6E-36 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TMO_1332 453494eb95fd661b58d784f116b6ecf7 353 Gene3D G3DSA:3.40.1570.10 18 291 1.3E-121 T 14-10-2018 TMO_1332 453494eb95fd661b58d784f116b6ecf7 353 SUPERFAMILY SSF144064 13 350 2.65E-111 T 14-10-2018 TMO_1332 453494eb95fd661b58d784f116b6ecf7 353 Gene3D G3DSA:3.40.1570.10 89 344 1.3E-121 T 14-10-2018 TMO_1332 453494eb95fd661b58d784f116b6ecf7 353 Pfam PF05171 Haemin-degrading HemS.ChuX domain 36 161 3.5E-35 T 14-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 TMO_1332 453494eb95fd661b58d784f116b6ecf7 353 Pfam PF05171 Haemin-degrading HemS.ChuX domain 216 348 3.8E-34 T 14-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 TMO_a0572 0ce9581a27ab0ccc01c16c1709257906 187 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 40 171 1.8E-21 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_d0021 64ff41e7fb055fe3782590c0d43f42b8 247 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 8 239 48.931 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TMO_d0021 64ff41e7fb055fe3782590c0d43f42b8 247 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 10 226 1.4E-58 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TMO_d0021 64ff41e7fb055fe3782590c0d43f42b8 247 Gene3D G3DSA:3.40.50.620 8 240 1.6E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_d0021 64ff41e7fb055fe3782590c0d43f42b8 247 SUPERFAMILY SSF52402 10 232 4.19E-53 T 14-10-2018 TMO_d0021 64ff41e7fb055fe3782590c0d43f42b8 247 PIRSF PIRSF006293 6 240 1.8E-65 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TMO_d0021 64ff41e7fb055fe3782590c0d43f42b8 247 Pfam PF06508 Queuosine biosynthesis protein QueC 10 233 1.0E-69 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TMO_0718 addbaa0cd1ac1b27f607f6e487565943 99 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 1 38 7.7E-11 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family TMO_c0581 0b4bf3d26096fa7f7f8d8176143c300b 272 Gene3D G3DSA:3.20.20.140 3 259 2.3E-52 T 14-10-2018 TMO_c0581 0b4bf3d26096fa7f7f8d8176143c300b 272 Pfam PF04909 Amidohydrolase 5 256 2.3E-21 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_c0581 0b4bf3d26096fa7f7f8d8176143c300b 272 SUPERFAMILY SSF51556 4 257 5.27E-50 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_2737 97318c932b83078e4b485e9b5f3df12b 278 SUPERFAMILY SSF81345 5 263 8.76E-35 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_2737 97318c932b83078e4b485e9b5f3df12b 278 Gene3D G3DSA:1.10.3470.10 41 273 5.6E-7 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_2737 97318c932b83078e4b485e9b5f3df12b 278 Pfam PF00950 ABC 3 transport family 13 267 7.6E-73 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TMO_b0557 1fb5bc762d5bf29f5875d9666a76ccd4 113 Gene3D G3DSA:1.10.10.10 1 112 5.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_b0557 1fb5bc762d5bf29f5875d9666a76ccd4 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 1.1E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_b0557 1fb5bc762d5bf29f5875d9666a76ccd4 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 1.1E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_b0557 1fb5bc762d5bf29f5875d9666a76ccd4 113 SUPERFAMILY SSF46785 6 109 5.04E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0557 1fb5bc762d5bf29f5875d9666a76ccd4 113 SMART SM00418 9 93 6.0E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_b0557 1fb5bc762d5bf29f5875d9666a76ccd4 113 Pfam PF12840 Helix-turn-helix domain 8 62 1.0E-14 T 14-10-2018 TMO_b0557 1fb5bc762d5bf29f5875d9666a76ccd4 113 SMART SM00419 24 75 0.0022 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_0206 eccbceec0b339fcbc5b45e1241c7375b 93 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 23 89 4.2E-16 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D TMO_0206 eccbceec0b339fcbc5b45e1241c7375b 93 Gene3D G3DSA:1.10.10.1150 8 91 7.0E-9 T 14-10-2018 TMO_c0752 41c56c3177339d5291ad8cce30b7f4c5 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 296 1.0E-47 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_1098 3dc04e8d68539f9b9485c235dc868c91 250 SUPERFAMILY SSF117143 88 207 5.89E-18 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TMO_1098 3dc04e8d68539f9b9485c235dc868c91 250 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 177 243 2.3E-16 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TMO_1098 3dc04e8d68539f9b9485c235dc868c91 250 Pfam PF00460 Flagella basal body rod protein 17 45 2.1E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TMO_1098 3dc04e8d68539f9b9485c235dc868c91 250 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 17 226 1.2E-53 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 TMO_1098 3dc04e8d68539f9b9485c235dc868c91 250 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 16 131 4.4E-35 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TMO_1098 3dc04e8d68539f9b9485c235dc868c91 250 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 22 42 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TMO_b0477 85fb2a9d3d7e3f513cc55a0172f225e5 411 Gene3D G3DSA:2.60.120.580 192 281 6.3E-21 T 14-10-2018 TMO_b0477 85fb2a9d3d7e3f513cc55a0172f225e5 411 Gene3D G3DSA:2.60.120.580 4 139 1.4E-17 T 14-10-2018 TMO_b0477 85fb2a9d3d7e3f513cc55a0172f225e5 411 Pfam PF03069 Acetamidase/Formamidase family 7 384 2.8E-175 T 14-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 TMO_b0477 85fb2a9d3d7e3f513cc55a0172f225e5 411 SUPERFAMILY SSF141130 15 383 2.22E-80 T 14-10-2018 TMO_1683 bb7f03f352282f364a538b301051ef50 197 SUPERFAMILY SSF48498 79 190 7.23E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1683 bb7f03f352282f364a538b301051ef50 197 Pfam PF13305 WHG domain 83 168 1.5E-12 T 14-10-2018 IPR025996 WHG domain TMO_1683 bb7f03f352282f364a538b301051ef50 197 Gene3D G3DSA:1.10.357.10 1 192 1.2E-35 T 14-10-2018 TMO_1683 bb7f03f352282f364a538b301051ef50 197 SUPERFAMILY SSF46689 5 75 4.37E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0034 61fb7ce166cef5f421361c06c11dba66 435 Pfam PF00144 Beta-lactamase 66 416 8.7E-71 T 14-10-2018 IPR001466 Beta-lactamase-related TMO_0034 61fb7ce166cef5f421361c06c11dba66 435 Gene3D G3DSA:3.40.710.10 39 435 2.5E-123 T 14-10-2018 TMO_0034 61fb7ce166cef5f421361c06c11dba66 435 SUPERFAMILY SSF56601 54 421 2.9E-85 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_2115 433881aa4ca0e01fc52f4bbbf1203073 310 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 11 305 5.5E-68 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_2115 433881aa4ca0e01fc52f4bbbf1203073 310 Pfam PF02567 Phenazine biosynthesis-like protein 15 304 9.8E-62 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_2115 433881aa4ca0e01fc52f4bbbf1203073 310 PIRSF PIRSF016184 7 307 3.2E-77 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_2115 433881aa4ca0e01fc52f4bbbf1203073 310 SUPERFAMILY SSF54506 10 306 8.17E-62 T 14-10-2018 TMO_2115 433881aa4ca0e01fc52f4bbbf1203073 310 Gene3D G3DSA:3.10.310.10 136 297 9.5E-79 T 14-10-2018 TMO_2115 433881aa4ca0e01fc52f4bbbf1203073 310 Gene3D G3DSA:3.10.310.10 13 299 9.5E-79 T 14-10-2018 TMO_0643 f3cea2e3090405fb7b8bcb82bd32e09c 375 Gene3D G3DSA:3.90.1200.10 144 375 4.8E-90 T 14-10-2018 TMO_0643 f3cea2e3090405fb7b8bcb82bd32e09c 375 Pfam PF01636 Phosphotransferase enzyme family 65 316 8.2E-46 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase TMO_0643 f3cea2e3090405fb7b8bcb82bd32e09c 375 SUPERFAMILY SSF56112 42 356 2.92E-55 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_0643 f3cea2e3090405fb7b8bcb82bd32e09c 375 Gene3D G3DSA:3.30.200.20 41 143 9.8E-36 T 14-10-2018 TMO_2795 a09740c07b3e4a3647175fe3dd9fc99d 151 SUPERFAMILY SSF53098 9 147 2.78E-58 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_2795 a09740c07b3e4a3647175fe3dd9fc99d 151 Pfam PF00075 RNase H 10 146 1.5E-50 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 TMO_2795 a09740c07b3e4a3647175fe3dd9fc99d 151 Gene3D G3DSA:3.30.420.10 1 150 2.8E-60 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_2795 a09740c07b3e4a3647175fe3dd9fc99d 151 Hamap MF_00042 Ribonuclease H [rnhA]. 8 151 33.312 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 TMO_b0262 b216de47e8a9d6a4c9eec1ec5ca72994 478 ProSitePatterns PS00571 Amidases signature. 161 192 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TMO_b0262 b216de47e8a9d6a4c9eec1ec5ca72994 478 Gene3D G3DSA:3.90.1300.10 8 472 4.9E-112 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0262 b216de47e8a9d6a4c9eec1ec5ca72994 478 SUPERFAMILY SSF75304 8 468 3.01E-111 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0262 b216de47e8a9d6a4c9eec1ec5ca72994 478 Pfam PF01425 Amidase 33 459 6.5E-85 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_2049 37d4b719faff6f7bb10cbc6ddd1996ea 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 288 2.0E-53 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0662 5796e27f5957a275c1c376d9a757c3d8 434 PIRSF PIRSF006066 4 434 1.3E-90 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_c0662 5796e27f5957a275c1c376d9a757c3d8 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 429 2.9E-91 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_c0662 5796e27f5957a275c1c376d9a757c3d8 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 423 8.7E-91 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_2702 29c74e22c096296303c2b3e21705e8e7 326 Pfam PF04773 FecR protein 118 209 7.4E-21 T 14-10-2018 IPR006860 FecR protein TMO_2702 29c74e22c096296303c2b3e21705e8e7 326 Gene3D G3DSA:2.60.120.1440 114 246 1.4E-24 T 14-10-2018 TMO_2702 29c74e22c096296303c2b3e21705e8e7 326 PIRSF PIRSF018266 1 323 3.0E-79 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_2702 29c74e22c096296303c2b3e21705e8e7 326 Pfam PF16220 Domain of unknown function (DUF4880) 8 49 2.3E-10 T 14-10-2018 IPR032623 FecR, N-terminal TMO_c0820 37c2e8a29f81ed13707bafac4c9186b0 526 SUPERFAMILY SSF51695 170 519 5.75E-25 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TMO_b0080 c1f0abaea6bf417f2ce60c4c096d9e1f 739 SUPERFAMILY SSF56935 36 739 4.45E-142 T 14-10-2018 TMO_b0080 c1f0abaea6bf417f2ce60c4c096d9e1f 739 Pfam PF00593 TonB dependent receptor 264 736 1.5E-66 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_b0080 c1f0abaea6bf417f2ce60c4c096d9e1f 739 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 82 735 6.8E-131 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 TMO_b0080 c1f0abaea6bf417f2ce60c4c096d9e1f 739 Gene3D G3DSA:2.170.130.10 58 190 1.2E-38 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_b0080 c1f0abaea6bf417f2ce60c4c096d9e1f 739 Pfam PF07715 TonB-dependent Receptor Plug Domain 81 179 9.4E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_b0080 c1f0abaea6bf417f2ce60c4c096d9e1f 739 Gene3D G3DSA:2.40.170.20 191 739 2.6E-128 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_1764 c56a2ccb837f70e2703a02f20cfa77f1 715 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 277 473 2.4E-21 T 14-10-2018 IPR004477 ComEC/Rec2-related protein TMO_1764 c56a2ccb837f70e2703a02f20cfa77f1 715 Pfam PF13567 Domain of unknown function (DUF4131) 58 208 1.5E-13 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 TMO_1764 c56a2ccb837f70e2703a02f20cfa77f1 715 Pfam PF03772 Competence protein 256 544 1.4E-57 T 14-10-2018 IPR004477 ComEC/Rec2-related protein TMO_a0126 055d249c043ad91a3acd78d752143623 285 Gene3D G3DSA:3.40.630.30 2 133 1.4E-10 T 14-10-2018 TMO_a0126 055d249c043ad91a3acd78d752143623 285 SUPERFAMILY SSF55729 7 264 3.96E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_a0126 055d249c043ad91a3acd78d752143623 285 Pfam PF00583 Acetyltransferase (GNAT) family 40 111 9.1E-5 T 14-10-2018 IPR000182 GNAT domain TMO_a0126 055d249c043ad91a3acd78d752143623 285 Gene3D G3DSA:3.40.630.90 150 285 4.6E-12 T 14-10-2018 TMO_0832 ff3e4f4b7d5c97ce5b2a1302f8154a03 104 Gene3D G3DSA:3.30.70.100 1 94 1.5E-14 T 14-10-2018 TMO_0832 ff3e4f4b7d5c97ce5b2a1302f8154a03 104 SUPERFAMILY SSF54909 1 95 7.51E-23 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_0832 ff3e4f4b7d5c97ce5b2a1302f8154a03 104 Pfam PF07876 Stress responsive A/B Barrel Domain 2 94 8.7E-19 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel TMO_0832 ff3e4f4b7d5c97ce5b2a1302f8154a03 104 SMART SM00886 2 94 1.4E-22 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel TMO_b0001 ec06ddff40715d27e3961df628871a1b 389 Pfam PF00107 Zinc-binding dehydrogenase 196 274 3.7E-13 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_b0001 ec06ddff40715d27e3961df628871a1b 389 SUPERFAMILY SSF51735 163 352 4.07E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0001 ec06ddff40715d27e3961df628871a1b 389 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 150 2.9E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_b0001 ec06ddff40715d27e3961df628871a1b 389 SUPERFAMILY SSF50129 1 199 5.93E-60 T 14-10-2018 IPR011032 GroES-like superfamily TMO_b0001 ec06ddff40715d27e3961df628871a1b 389 Gene3D G3DSA:3.40.50.720 177 340 3.1E-126 T 14-10-2018 TMO_b0001 ec06ddff40715d27e3961df628871a1b 389 Gene3D G3DSA:3.90.180.10 8 375 3.1E-126 T 14-10-2018 TMO_b0001 ec06ddff40715d27e3961df628871a1b 389 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 3.6E-12 T 14-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated TMO_a0515 216ecd8012a2b45f3c8254b397508e7b 434 PIRSF PIRSF006066 1 434 1.7E-88 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_a0515 216ecd8012a2b45f3c8254b397508e7b 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 3 424 7.6E-85 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_a0515 216ecd8012a2b45f3c8254b397508e7b 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 10 430 4.6E-88 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_3269 df76c45471a1ef0d268a5bf7a110d6e0 165 Pfam PF01037 Lrp/AsnC ligand binding domain 99 158 2.9E-9 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_3269 df76c45471a1ef0d268a5bf7a110d6e0 165 Gene3D G3DSA:3.30.70.920 78 164 2.1E-9 T 14-10-2018 TMO_3269 df76c45471a1ef0d268a5bf7a110d6e0 165 Pfam PF13404 AsnC-type helix-turn-helix domain 21 62 5.1E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_3269 df76c45471a1ef0d268a5bf7a110d6e0 165 Gene3D G3DSA:1.10.10.10 18 72 2.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3269 df76c45471a1ef0d268a5bf7a110d6e0 165 SMART SM00344 21 130 7.2E-12 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_3269 df76c45471a1ef0d268a5bf7a110d6e0 165 SUPERFAMILY SSF46785 20 71 1.95E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3269 df76c45471a1ef0d268a5bf7a110d6e0 165 SUPERFAMILY SSF54909 87 160 6.03E-9 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_3269 df76c45471a1ef0d268a5bf7a110d6e0 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 48 5.8E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_3269 df76c45471a1ef0d268a5bf7a110d6e0 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 48 67 5.8E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_3269 df76c45471a1ef0d268a5bf7a110d6e0 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 37 5.8E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TMO_2675 200bbc4662b9e29bd95d440d8cf95fce 318 Pfam PF01618 MotA/TolQ/ExbB proton channel family 190 287 4.1E-33 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TMO_2675 200bbc4662b9e29bd95d440d8cf95fce 318 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 86 301 4.6E-96 T 14-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 TMO_b0535 3cedc24a639d0e7e515bef1daa629ad8 141 Gene3D G3DSA:3.40.1260.10 19 137 9.2E-14 T 14-10-2018 IPR027396 DsrEFH-like TMO_b0535 3cedc24a639d0e7e515bef1daa629ad8 141 SUPERFAMILY SSF75169 25 137 3.77E-16 T 14-10-2018 IPR027396 DsrEFH-like TMO_a0229 6b9778f3f5362a80b8ea63fe90e09d49 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 26 289 2.2E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2899 7feef5ddf98cf05c0d7433adcbc1f2c6 533 Pfam PF07690 Major Facilitator Superfamily 35 428 8.0E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_2899 7feef5ddf98cf05c0d7433adcbc1f2c6 533 Gene3D G3DSA:1.20.1720.10 31 236 4.3E-38 T 14-10-2018 TMO_2899 7feef5ddf98cf05c0d7433adcbc1f2c6 533 SUPERFAMILY SSF103473 18 522 5.75E-58 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2899 7feef5ddf98cf05c0d7433adcbc1f2c6 533 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 31 514 2.5E-137 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 TMO_a0505 89237079699831de4e680d00a1ae995f 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 9.7E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0505 89237079699831de4e680d00a1ae995f 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 9.7E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0505 89237079699831de4e680d00a1ae995f 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 9.7E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0505 89237079699831de4e680d00a1ae995f 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 9.7E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0505 89237079699831de4e680d00a1ae995f 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 9.7E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0505 89237079699831de4e680d00a1ae995f 292 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 4.7E-50 T 14-10-2018 TMO_a0505 89237079699831de4e680d00a1ae995f 292 Gene3D G3DSA:3.40.50.720 3 263 9.3E-67 T 14-10-2018 TMO_a0505 89237079699831de4e680d00a1ae995f 292 SUPERFAMILY SSF51735 7 252 2.23E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_a0505 89237079699831de4e680d00a1ae995f 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0505 89237079699831de4e680d00a1ae995f 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_a0505 89237079699831de4e680d00a1ae995f 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_3030 49b6aca4513e72cb82c70705c31f5f5b 214 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 100 193 1.8E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_3030 49b6aca4513e72cb82c70705c31f5f5b 214 Gene3D G3DSA:1.10.760.10 68 200 2.2E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_3030 49b6aca4513e72cb82c70705c31f5f5b 214 SUPERFAMILY SSF46626 88 197 1.08E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_3030 49b6aca4513e72cb82c70705c31f5f5b 214 PRINTS PR00605 Class IC cytochrome C signature 110 121 5.4E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TMO_3030 49b6aca4513e72cb82c70705c31f5f5b 214 PRINTS PR00605 Class IC cytochrome C signature 171 193 5.4E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TMO_0249 eeec3afd9ccca9ae9ba7feb4640aeae4 249 Gene3D G3DSA:1.25.40.290 134 248 1.6E-26 T 14-10-2018 TMO_0249 eeec3afd9ccca9ae9ba7feb4640aeae4 249 SUPERFAMILY SSF48371 57 247 7.2E-32 T 14-10-2018 IPR016024 Armadillo-type fold TMO_1464 68f094fc432b466a2272e6f67cb94089 244 Pfam PF14342 Domain of unknown function (DUF4396) 90 241 1.2E-40 T 14-10-2018 IPR025509 Domain of unknown function DUF4396 TMO_c0413 683dc6ae255e1b26f9cc57885a17962f 344 Gene3D G3DSA:3.20.20.100 18 342 1.3E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_c0413 683dc6ae255e1b26f9cc57885a17962f 344 SUPERFAMILY SSF51430 18 318 2.23E-84 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_c0413 683dc6ae255e1b26f9cc57885a17962f 344 Pfam PF00248 Aldo/keto reductase family 26 318 3.1E-59 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_2574 f5e52c1470d3be6bb37bc73e45b969c7 265 Gene3D G3DSA:3.90.226.10 7 206 1.3E-62 T 14-10-2018 TMO_2574 f5e52c1470d3be6bb37bc73e45b969c7 265 Gene3D G3DSA:1.10.12.10 208 265 1.6E-21 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_2574 f5e52c1470d3be6bb37bc73e45b969c7 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 264 1.3E-54 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_2574 f5e52c1470d3be6bb37bc73e45b969c7 265 SUPERFAMILY SSF52096 10 265 7.62E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_a0254 e3323da0a42b7d9c7388203fe8aa50c5 580 SUPERFAMILY SSF52016 382 567 5.57E-55 T 14-10-2018 TMO_a0254 e3323da0a42b7d9c7388203fe8aa50c5 580 Pfam PF00920 Dehydratase family 45 561 2.4E-182 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_a0254 e3323da0a42b7d9c7388203fe8aa50c5 580 SUPERFAMILY SSF143975 8 381 1.57E-128 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_a0254 e3323da0a42b7d9c7388203fe8aa50c5 580 Gene3D G3DSA:3.50.30.80 382 536 2.7E-48 T 14-10-2018 TMO_a0254 e3323da0a42b7d9c7388203fe8aa50c5 580 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 128 138 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TMO_2228 79e879f3a54527370e0a5042cddd2448 285 SUPERFAMILY SSF52200 3 123 6.54E-26 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TMO_2228 79e879f3a54527370e0a5042cddd2448 285 Pfam PF13676 TIR domain 3 109 2.3E-22 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_2228 79e879f3a54527370e0a5042cddd2448 285 Gene3D G3DSA:3.40.50.10140 2 132 1.4E-28 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TMO_2228 79e879f3a54527370e0a5042cddd2448 285 SMART SM00255 3 129 2.4E-4 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_2382 cd7f0ac333b6942ebb2f386d12ec3210 424 Pfam PF06074 Protein of unknown function (DUF935) 1 412 4.0E-69 T 14-10-2018 IPR009279 Protein of unknown function DUF935 TMO_b0375 b85012feed282f1380a90bb90176587a 424 SUPERFAMILY SSF53850 23 418 3.56E-60 T 14-10-2018 TMO_b0375 b85012feed282f1380a90bb90176587a 424 Pfam PF13416 Bacterial extracellular solute-binding protein 47 362 1.7E-31 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_b0375 b85012feed282f1380a90bb90176587a 424 Gene3D G3DSA:3.40.190.10 145 413 1.3E-76 T 14-10-2018 TMO_b0375 b85012feed282f1380a90bb90176587a 424 Gene3D G3DSA:3.40.190.10 40 376 1.3E-76 T 14-10-2018 TMO_2917 3cbc8eb4a1fca3d09bd3da890d28cf2a 412 Pfam PF06224 Winged helix DNA-binding domain 45 384 8.3E-82 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 TMO_2861 adbeae9a2a433ce7b2624b50b82dc297 557 SUPERFAMILY SSF52317 256 333 9.16E-8 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_2861 adbeae9a2a433ce7b2624b50b82dc297 557 Gene3D G3DSA:3.40.50.880 237 363 1.8E-5 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_c0656 d54b8a289adc3dfcf1bf0beddf6e8bf6 193 Gene3D G3DSA:1.10.357.10 1 183 5.4E-43 T 14-10-2018 TMO_c0656 d54b8a289adc3dfcf1bf0beddf6e8bf6 193 SUPERFAMILY SSF46689 2 79 2.62E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_c0656 d54b8a289adc3dfcf1bf0beddf6e8bf6 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_2507 bacaf8dc90b6b62adef44ee4cd109da9 207 Gene3D G3DSA:3.40.630.30 31 171 1.9E-9 T 14-10-2018 TMO_2507 bacaf8dc90b6b62adef44ee4cd109da9 207 SUPERFAMILY SSF55729 52 167 1.04E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2883 e59044fdcbb6df3d0f07b79b083ef422 544 SUPERFAMILY SSF102114 261 456 6.28E-14 T 14-10-2018 TMO_2883 e59044fdcbb6df3d0f07b79b083ef422 544 Gene3D G3DSA:3.20.20.70 261 474 1.4E-7 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2883 e59044fdcbb6df3d0f07b79b083ef422 544 TIGRFAM TIGR04434 rSAM_Pput_1520: B12-binding domain/radical SAM domain protein 14 533 2.0E-299 T 14-10-2018 IPR030973 Conserved hypothetical protein CHP04434 TMO_2107 2d4722f4dfdd101df983129d447efab4 104 Gene3D G3DSA:3.30.2310.20 1 98 9.3E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_2107 2d4722f4dfdd101df983129d447efab4 104 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 92 4.4E-16 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_0442 a58f96f55f794305e4bfb545b1b9ddc8 209 Pfam PF01810 LysE type translocator 18 202 6.9E-34 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_0328 b81efe5fec04f658563423b891ceee0e 301 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 281 2.2E-46 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2918 29cf1ca4daeb75e88490ff0bbb743ea5 345 Gene3D G3DSA:2.120.10.30 21 345 3.4E-113 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TMO_2918 29cf1ca4daeb75e88490ff0bbb743ea5 345 SUPERFAMILY SSF63829 39 322 3.14E-55 T 14-10-2018 TMO_2918 29cf1ca4daeb75e88490ff0bbb743ea5 345 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 68 294 9.4E-30 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region TMO_a0589 6c18686aa86bb9bc20fc28b7d7b6204b 311 Pfam PF08242 Methyltransferase domain 146 244 4.4E-10 T 14-10-2018 IPR013217 Methyltransferase type 12 TMO_a0589 6c18686aa86bb9bc20fc28b7d7b6204b 311 Gene3D G3DSA:3.40.50.150 114 303 6.8E-20 T 14-10-2018 TMO_a0589 6c18686aa86bb9bc20fc28b7d7b6204b 311 SUPERFAMILY SSF53335 135 290 5.52E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_b0027 650075c6a3b81c90a291a77046e6778e 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.2E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0027 650075c6a3b81c90a291a77046e6778e 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.2E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0027 650075c6a3b81c90a291a77046e6778e 229 SUPERFAMILY SSF46785 12 79 4.82E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_b0027 650075c6a3b81c90a291a77046e6778e 229 SMART SM00895 85 209 3.0E-21 T 14-10-2018 IPR011711 GntR, C-terminal TMO_b0027 650075c6a3b81c90a291a77046e6778e 229 SUPERFAMILY SSF48008 83 216 6.02E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0027 650075c6a3b81c90a291a77046e6778e 229 Gene3D G3DSA:1.20.120.530 81 210 1.5E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_b0027 650075c6a3b81c90a291a77046e6778e 229 Pfam PF07729 FCD domain 85 207 4.0E-28 T 14-10-2018 IPR011711 GntR, C-terminal TMO_b0027 650075c6a3b81c90a291a77046e6778e 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 1.7E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0027 650075c6a3b81c90a291a77046e6778e 229 SMART SM00345 17 75 1.5E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_b0027 650075c6a3b81c90a291a77046e6778e 229 Gene3D G3DSA:1.10.10.10 11 76 2.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3337 5ef25830421cd0a5e44a483c09a81cc9 434 Gene3D G3DSA:3.40.190.10 103 368 9.3E-17 T 14-10-2018 TMO_3337 5ef25830421cd0a5e44a483c09a81cc9 434 Pfam PF13416 Bacterial extracellular solute-binding protein 86 385 6.2E-28 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein TMO_3337 5ef25830421cd0a5e44a483c09a81cc9 434 Gene3D G3DSA:3.40.190.10 189 335 9.3E-17 T 14-10-2018 TMO_3337 5ef25830421cd0a5e44a483c09a81cc9 434 SUPERFAMILY SSF53850 66 429 1.63E-35 T 14-10-2018 TMO_3337 5ef25830421cd0a5e44a483c09a81cc9 434 PIRSF PIRSF029172 7 433 7.9E-142 T 14-10-2018 IPR027020 Protein ynjB TMO_3393 6de8bd3bb0e2cf2b8f4b5a34dce3af41 103 Gene3D G3DSA:1.10.630.10 2 102 8.5E-10 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_c0437 a5ff66482cee0d13df94c8ac42dde2de 154 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TMO_c0437 a5ff66482cee0d13df94c8ac42dde2de 154 Gene3D G3DSA:3.10.20.30 1 73 2.5E-26 T 14-10-2018 IPR012675 Beta-grasp domain superfamily TMO_c0437 a5ff66482cee0d13df94c8ac42dde2de 154 Gene3D G3DSA:1.10.150.120 74 154 5.1E-25 T 14-10-2018 TMO_c0437 a5ff66482cee0d13df94c8ac42dde2de 154 Pfam PF01799 [2Fe-2S] binding domain 72 144 3.2E-26 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_c0437 a5ff66482cee0d13df94c8ac42dde2de 154 SUPERFAMILY SSF47741 84 151 6.02E-28 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily TMO_c0437 a5ff66482cee0d13df94c8ac42dde2de 154 SUPERFAMILY SSF54292 2 77 6.82E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TMO_c0437 a5ff66482cee0d13df94c8ac42dde2de 154 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 56 5.3E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_c0684 8f7b11712380d9afe75467b25c29d8e5 1132 Pfam PF13116 Protein of unknown function 417 697 4.8E-12 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 TMO_c0684 8f7b11712380d9afe75467b25c29d8e5 1132 Pfam PF13502 AsmA-like C-terminal region 991 1087 2.5E-17 T 14-10-2018 IPR032712 AsmA-like, C-terminal TMO_2343 3d187c2889c15041f6de9c5e1039e8f3 146 PIRSF PIRSF032025 4 146 1.2E-49 T 14-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 TMO_2343 3d187c2889c15041f6de9c5e1039e8f3 146 Pfam PF07370 Protein of unknown function (DUF1489) 8 146 1.7E-47 T 14-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 TMO_3291 e2f3cdb9a870e7de17e9fc3c5f15a884 97 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 24 90 1.2E-9 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D TMO_c0297 7d715646acd57c334c4fb4760f2c0292 140 Pfam PF03994 Domain of Unknown Function (DUF350) 27 70 2.5E-8 T 14-10-2018 IPR007140 Protein of unknown function DUF350 TMO_c0297 7d715646acd57c334c4fb4760f2c0292 140 Pfam PF03994 Domain of Unknown Function (DUF350) 86 138 1.1E-8 T 14-10-2018 IPR007140 Protein of unknown function DUF350 TMO_3314 4a9f6e88a0b4eb323603b61450bf8b21 142 Gene3D G3DSA:3.10.450.50 4 135 1.3E-36 T 14-10-2018 TMO_3314 4a9f6e88a0b4eb323603b61450bf8b21 142 Pfam PF13474 SnoaL-like domain 19 124 7.1E-19 T 14-10-2018 IPR037401 SnoaL-like domain TMO_3314 4a9f6e88a0b4eb323603b61450bf8b21 142 SUPERFAMILY SSF54427 10 128 8.35E-28 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_1212 ec8e3ef5e6ef5103f66c243c1ea753dd 175 Pfam PF14525 AraC-binding-like domain 30 156 5.4E-21 T 14-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like TMO_1031 18a0a567a07b91af3720f123d956192c 316 Gene3D G3DSA:1.10.3720.10 88 308 3.4E-21 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1031 18a0a567a07b91af3720f123d956192c 316 SUPERFAMILY SSF161098 92 297 2.29E-18 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1031 18a0a567a07b91af3720f123d956192c 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 314 6.5E-42 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0559 17e25d32dddc29f4404da3d34891b0e8 281 Pfam PF03239 Iron permease FTR1 family 1 262 4.5E-56 T 14-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 TMO_c0348 4bee6487f13ff54fcad1277cd6d82975 282 SUPERFAMILY SSF161098 75 264 2.22E-25 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0348 4bee6487f13ff54fcad1277cd6d82975 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 281 2.9E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0348 4bee6487f13ff54fcad1277cd6d82975 282 Gene3D G3DSA:1.10.3720.10 69 281 1.3E-18 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0646 4b1348429b87727204fd86ebcc4c131b 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 152 9.4E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_b0011 d4989b16db0590fc19bd6849208790c3 710 Pfam PF12571 Phage tail-collar fibre protein 1 97 8.7E-16 T 14-10-2018 IPR022225 Phage tail fibre protein TMO_1585 34f75e360961ffbca360710e1f49f3cf 158 SUPERFAMILY SSF74982 12 137 6.54E-51 T 14-10-2018 IPR023620 Small protein B TMO_1585 34f75e360961ffbca360710e1f49f3cf 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 13 137 4.0E-33 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 TMO_1585 34f75e360961ffbca360710e1f49f3cf 158 ProSitePatterns PS01317 SsrA-binding protein. 31 43 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site TMO_1585 34f75e360961ffbca360710e1f49f3cf 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 13 154 1.9E-55 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 TMO_1585 34f75e360961ffbca360710e1f49f3cf 158 Pfam PF01668 SmpB protein 14 155 2.0E-60 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 TMO_1585 34f75e360961ffbca360710e1f49f3cf 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 71.861 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 TMO_1585 34f75e360961ffbca360710e1f49f3cf 158 Gene3D G3DSA:2.40.280.10 8 134 2.9E-49 T 14-10-2018 IPR023620 Small protein B TMO_1124 6f59656dff44441ea3e5ce483a795582 91 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 86 2.9E-31 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 TMO_1124 6f59656dff44441ea3e5ce483a795582 91 Pfam PF01313 Bacterial export proteins, family 3 6 78 1.7E-29 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TMO_1124 6f59656dff44441ea3e5ce483a795582 91 PIRSF PIRSF004669 1 89 4.1E-31 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TMO_1124 6f59656dff44441ea3e5ce483a795582 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.0E-18 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TMO_1124 6f59656dff44441ea3e5ce483a795582 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.0E-18 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TMO_1124 6f59656dff44441ea3e5ce483a795582 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.0E-18 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TMO_a0252 5f297b0919af82e05077cc2982faf9a6 190 Gene3D G3DSA:3.40.605.10 13 165 2.9E-39 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_a0252 5f297b0919af82e05077cc2982faf9a6 190 Pfam PF00171 Aldehyde dehydrogenase family 43 130 5.2E-12 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_a0252 5f297b0919af82e05077cc2982faf9a6 190 SUPERFAMILY SSF53720 38 162 2.75E-21 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_b0492 c660a88aa64e55df6ffaa79d77a6ba2f 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 317 1.5E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0492 c660a88aa64e55df6ffaa79d77a6ba2f 317 Gene3D G3DSA:1.10.3720.10 89 310 9.2E-20 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0492 c660a88aa64e55df6ffaa79d77a6ba2f 317 SUPERFAMILY SSF161098 98 303 1.4E-15 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1537 817318cdfd7756f3d08bf88c7e123a18 168 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 147 16.17 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 TMO_1537 817318cdfd7756f3d08bf88c7e123a18 168 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 71 1.1E-23 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 TMO_1537 817318cdfd7756f3d08bf88c7e123a18 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 7.8E-17 T 14-10-2018 TMO_1537 817318cdfd7756f3d08bf88c7e123a18 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 7.8E-17 T 14-10-2018 TMO_1537 817318cdfd7756f3d08bf88c7e123a18 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 7.8E-17 T 14-10-2018 TMO_1537 817318cdfd7756f3d08bf88c7e123a18 168 Pfam PF02416 mttA/Hcf106 family 4 49 1.7E-6 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 TMO_c0622 6435d17ee30b990ae759672231a89a36 141 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 44 116 1.8E-18 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 TMO_c0622 6435d17ee30b990ae759672231a89a36 141 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 37 132 6.9E-34 T 14-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 TMO_a0042 7c0cda78b679dfadfb827c6f1ee541db 417 SUPERFAMILY SSF47240 95 245 7.07E-14 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_0475 b9359d48ef6414048476cfdfaf72bd6c 409 Gene3D G3DSA:3.40.50.2300 156 287 6.8E-99 T 14-10-2018 TMO_0475 b9359d48ef6414048476cfdfaf72bd6c 409 Gene3D G3DSA:3.40.50.2300 40 347 6.8E-99 T 14-10-2018 TMO_0475 b9359d48ef6414048476cfdfaf72bd6c 409 SUPERFAMILY SSF53822 37 408 5.38E-80 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_0475 b9359d48ef6414048476cfdfaf72bd6c 409 Pfam PF13458 Periplasmic binding protein 37 373 1.5E-81 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_1331 41c7cd5d38fe6e7deff8c83478d34828 65 Gene3D G3DSA:2.10.70.10 24 65 1.3E-16 T 14-10-2018 TMO_1331 41c7cd5d38fe6e7deff8c83478d34828 65 Pfam PF10636 Hemin uptake protein hemP 30 65 1.2E-18 T 14-10-2018 IPR019600 Hemin uptake protein HemP TMO_a0046 99543e6208f8198d7486b7297d056015 344 Gene3D G3DSA:3.40.50.300 114 317 5.8E-11 T 14-10-2018 TMO_a0046 99543e6208f8198d7486b7297d056015 344 SUPERFAMILY SSF52540 65 293 1.27E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_c0858 4469048a30b27c43765eb54d9eb701e1 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 22 88 1.8E-17 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D TMO_c0858 4469048a30b27c43765eb54d9eb701e1 92 Gene3D G3DSA:1.10.10.1150 24 90 8.8E-11 T 14-10-2018 TMO_c0584 a4724c33a2864f73c990e1c62465178a 497 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 17 438 4.9E-138 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane TMO_c0308 42f32803de7392da6188c2e96db6d651 603 SUPERFAMILY SSF55486 8 581 6.96E-110 T 14-10-2018 TMO_c0308 42f32803de7392da6188c2e96db6d651 603 Pfam PF08439 Oligopeptidase F 120 189 2.9E-17 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain TMO_c0308 42f32803de7392da6188c2e96db6d651 603 Pfam PF01432 Peptidase family M3 342 584 3.1E-34 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 TMO_c0308 42f32803de7392da6188c2e96db6d651 603 Gene3D G3DSA:1.20.140.70 29 175 6.6E-15 T 14-10-2018 TMO_c0308 42f32803de7392da6188c2e96db6d651 603 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 17 595 3.8E-188 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 TMO_c0308 42f32803de7392da6188c2e96db6d651 603 Gene3D G3DSA:1.10.1370.20 230 600 1.6E-115 T 14-10-2018 TMO_0448 ab091d9ab015d809df23093a1b1d1745 566 Pfam PF03814 Potassium-transporting ATPase A subunit 11 558 8.7E-223 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 TMO_0448 ab091d9ab015d809df23093a1b1d1745 566 PIRSF PIRSF001294 1 562 1.0E-219 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 TMO_0448 ab091d9ab015d809df23093a1b1d1745 566 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 560 33.183 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 TMO_0448 ab091d9ab015d809df23093a1b1d1745 566 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 560 3.4E-210 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 TMO_3374 370e9f25631b98c9b4f04af4a3481165 150 Pfam PF11162 Protein of unknown function (DUF2946) 29 147 1.2E-6 T 14-10-2018 IPR021333 Protein of unknown function DUF2946 TMO_0701 f192faa7b7dfd630d5faa3f8346d14f6 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 20 144 3.4E-15 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_b0339 e0d64c7f7ea93773a4d1bea9e8bdcdf3 91 SUPERFAMILY SSF56209 4 78 1.57E-11 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0339 e0d64c7f7ea93773a4d1bea9e8bdcdf3 91 Gene3D G3DSA:3.90.330.10 7 79 1.7E-5 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0264 b818c53696a3a3e7cd4752b293a1542d 321 SUPERFAMILY SSF53474 28 318 5.61E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0264 b818c53696a3a3e7cd4752b293a1542d 321 Gene3D G3DSA:3.40.50.1820 2 320 9.1E-81 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0264 b818c53696a3a3e7cd4752b293a1542d 321 Pfam PF07859 alpha/beta hydrolase fold 88 294 9.0E-59 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 TMO_b0264 b818c53696a3a3e7cd4752b293a1542d 321 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 88 104 - T 14-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 TMO_c0881 25586b52bdb45444b55dffd27ab3f62b 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 306 3.3E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_c0881 25586b52bdb45444b55dffd27ab3f62b 311 SUPERFAMILY SSF161098 107 291 8.37E-20 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0881 25586b52bdb45444b55dffd27ab3f62b 311 Gene3D G3DSA:1.10.3720.10 103 306 1.1E-17 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0315 b8a707211ab95e8245ae85621a5346c0 347 Gene3D G3DSA:3.10.180.50 6 347 2.7E-128 T 14-10-2018 TMO_b0315 b8a707211ab95e8245ae85621a5346c0 347 Pfam PF07063 Domain of unknown function (DUF1338) 50 344 2.0E-66 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 TMO_b0315 b8a707211ab95e8245ae85621a5346c0 347 SMART SM01150 51 345 1.4E-86 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 TMO_0918 fc03077cfd530e3672d6e2c7d1424e56 388 Gene3D G3DSA:3.40.640.10 27 263 1.1E-42 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TMO_0918 fc03077cfd530e3672d6e2c7d1424e56 388 SUPERFAMILY SSF53383 9 378 3.02E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TMO_0918 fc03077cfd530e3672d6e2c7d1424e56 388 PIRSF PIRSF000525 14 382 5.8E-48 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 TMO_0918 fc03077cfd530e3672d6e2c7d1424e56 388 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 9 380 1.9E-202 T 14-10-2018 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 TMO_0918 fc03077cfd530e3672d6e2c7d1424e56 388 Pfam PF00266 Aminotransferase class-V 135 313 1.4E-5 T 14-10-2018 IPR000192 Aminotransferase class V domain TMO_0918 fc03077cfd530e3672d6e2c7d1424e56 388 Gene3D G3DSA:3.90.1150.10 266 381 1.9E-15 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TMO_c0827 358b287e4b9e358a2c10622ee8765a03 188 Gene3D G3DSA:3.90.280.10 10 188 1.0E-48 T 14-10-2018 IPR036610 PEBP-like superfamily TMO_c0827 358b287e4b9e358a2c10622ee8765a03 188 SUPERFAMILY SSF49777 27 186 4.58E-44 T 14-10-2018 IPR036610 PEBP-like superfamily TMO_c0827 358b287e4b9e358a2c10622ee8765a03 188 Pfam PF01161 Phosphatidylethanolamine-binding protein 49 186 2.5E-32 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein TMO_c0827 358b287e4b9e358a2c10622ee8765a03 188 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 50 183 1.2E-38 T 14-10-2018 IPR005247 YbhB/YbcL TMO_2669 e554e93f124f8e786b2bbf554c50c395 121 Pfam PF00872 Transposase, Mutator family 1 120 1.4E-31 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TMO_c0333 020b32d0baf77582c646f5def77063b2 326 SUPERFAMILY SSF53686 9 316 1.31E-64 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_c0333 020b32d0baf77582c646f5def77063b2 326 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 308 7.4E-59 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TMO_c0333 020b32d0baf77582c646f5def77063b2 326 Gene3D G3DSA:3.40.50.1100 18 313 2.3E-70 T 14-10-2018 TMO_c0333 020b32d0baf77582c646f5def77063b2 326 Gene3D G3DSA:3.40.50.1100 50 148 2.3E-70 T 14-10-2018 TMO_1274 5e9de6ccb80e2ad1af7243ef973c8648 428 PIRSF PIRSF006066 2 428 2.7E-94 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_1274 5e9de6ccb80e2ad1af7243ef973c8648 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 417 3.8E-89 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_1274 5e9de6ccb80e2ad1af7243ef973c8648 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 4.9E-99 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0107 c41fecaa04a111f583a8cb16762ea253 336 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 8 213 3.8E-45 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 TMO_b0107 c41fecaa04a111f583a8cb16762ea253 336 PIRSF PIRSF000267 4 336 1.2E-89 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 TMO_b0107 c41fecaa04a111f583a8cb16762ea253 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 326 8.9E-96 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 TMO_2770 b13e9678bbe0e72eaa9389fbd1035283 264 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 7 248 5.2E-58 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 TMO_a0521 cf4adba51b8fa05e8bc51b47837b5285 261 Gene3D G3DSA:1.10.12.10 203 261 1.5E-9 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TMO_a0521 cf4adba51b8fa05e8bc51b47837b5285 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 258 2.7E-44 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TMO_a0521 cf4adba51b8fa05e8bc51b47837b5285 261 Gene3D G3DSA:3.90.226.10 1 200 6.3E-59 T 14-10-2018 TMO_a0521 cf4adba51b8fa05e8bc51b47837b5285 261 SUPERFAMILY SSF52096 3 258 4.82E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TMO_0904 f25de24cde48b01370d9260e03080e49 152 Gene3D G3DSA:3.30.420.270 71 140 1.6E-23 T 14-10-2018 TMO_0904 f25de24cde48b01370d9260e03080e49 152 Pfam PF02472 Biopolymer transport protein ExbD/TolR 22 144 9.1E-32 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 TMO_0904 f25de24cde48b01370d9260e03080e49 152 TIGRFAM TIGR02801 tolR: protein TolR 23 142 2.5E-41 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 TMO_2317 050b4377b0ff184e23615978fe155be4 211 TIGRFAM TIGR02217 chp_TIGR02217: TIGR02217 family protein 5 210 4.8E-76 T 14-10-2018 IPR011740 Protein of unknown function DUF2460 TMO_2317 050b4377b0ff184e23615978fe155be4 211 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 6 210 1.1E-78 T 14-10-2018 IPR011740 Protein of unknown function DUF2460 TMO_a0171 d81790debadc7b857c9c36204de0a569 228 SUPERFAMILY SSF46689 20 86 5.13E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0171 d81790debadc7b857c9c36204de0a569 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 7.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0171 d81790debadc7b857c9c36204de0a569 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 7.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0171 d81790debadc7b857c9c36204de0a569 228 Gene3D G3DSA:1.10.357.10 14 189 1.7E-18 T 14-10-2018 TMO_a0171 d81790debadc7b857c9c36204de0a569 228 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 73 1.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_a0172 bd6d1e45217e1d64f5b2d50bc04ab6b3 126 Pfam PF06249 Ethanolamine utilisation protein EutQ 34 116 2.2E-10 T 14-10-2018 IPR010424 Ethanolamine utilisation EutQ TMO_a0172 bd6d1e45217e1d64f5b2d50bc04ab6b3 126 SUPERFAMILY SSF51182 6 112 2.58E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_a0172 bd6d1e45217e1d64f5b2d50bc04ab6b3 126 Gene3D G3DSA:2.60.120.10 10 117 6.3E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_c0406 3fb7cfed86f7f7aa12d358c243d9a898 376 Pfam PF02653 Branched-chain amino acid transport system / permease component 76 350 1.5E-29 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_a0495 eadb383f43c6d7867c35345ab47fd78d 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 14 275 1.7E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_a0553 b3b72c7eb9d62dbfadd1f1825c28da94 164 Gene3D G3DSA:3.10.450.50 4 164 8.3E-31 T 14-10-2018 TMO_a0553 b3b72c7eb9d62dbfadd1f1825c28da94 164 SUPERFAMILY SSF54427 11 163 1.96E-34 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_a0553 b3b72c7eb9d62dbfadd1f1825c28da94 164 Pfam PF00866 Ring hydroxylating beta subunit 28 157 8.5E-7 T 14-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 TMO_d0002 bea8983297ac67837fb09d753587a2d2 149 Pfam PF12120 Rifampin ADP-ribosyl transferase 24 121 8.6E-47 T 14-10-2018 IPR021975 Rifampin ADP-ribosyltransferase TMO_d0002 bea8983297ac67837fb09d753587a2d2 149 Gene3D G3DSA:3.20.170.40 7 149 2.1E-60 T 14-10-2018 IPR038611 Rifampin ADP-ribosyltransferase superfamily TMO_2199 51de38ae08016a7f417b5ef29d8608f7 303 Pfam PF01464 Transglycosylase SLT domain 70 168 7.5E-26 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 TMO_2199 51de38ae08016a7f417b5ef29d8608f7 303 SUPERFAMILY SSF53955 63 184 2.85E-40 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_2199 51de38ae08016a7f417b5ef29d8608f7 303 Gene3D G3DSA:1.10.530.10 62 190 9.5E-39 T 14-10-2018 TMO_2300 072505b46efe96c211fafdf1bc434730 376 SUPERFAMILY SSF51690 106 365 3.93E-31 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 TMO_2300 072505b46efe96c211fafdf1bc434730 376 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 49 101 1.4E-4 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 TMO_2300 072505b46efe96c211fafdf1bc434730 376 SUPERFAMILY SSF54675 7 103 5.45E-9 T 14-10-2018 TMO_2300 072505b46efe96c211fafdf1bc434730 376 Gene3D G3DSA:3.20.20.70 102 342 3.9E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_3478 fe2b8fe95251a2d43e0960ceadba7ce3 660 Pfam PF12551 Poly-beta-hydroxybutyrate polymerase N terminal 62 101 7.8E-20 T 14-10-2018 IPR022211 Poly-beta-hydroxybutyrate polymerase N-terminal TMO_3478 fe2b8fe95251a2d43e0960ceadba7ce3 660 SUPERFAMILY SSF53474 283 579 9.63E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3478 fe2b8fe95251a2d43e0960ceadba7ce3 660 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 169 338 1.4E-51 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 TMO_b0122 f07ee1eb653c4a1686b345ac21ef6951 312 SUPERFAMILY SSF55347 129 283 2.48E-63 T 14-10-2018 TMO_b0122 f07ee1eb653c4a1686b345ac21ef6951 312 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 120 2.6E-11 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_b0122 f07ee1eb653c4a1686b345ac21ef6951 312 PIRSF PIRSF015689 1 312 4.1E-134 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 TMO_b0122 f07ee1eb653c4a1686b345ac21ef6951 312 SUPERFAMILY SSF51735 1 153 2.4E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0122 f07ee1eb653c4a1686b345ac21ef6951 312 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 312 142.356 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 TMO_b0122 f07ee1eb653c4a1686b345ac21ef6951 312 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 304 5.0E-142 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 TMO_b0122 f07ee1eb653c4a1686b345ac21ef6951 312 Gene3D G3DSA:3.30.360.10 129 297 1.1E-127 T 14-10-2018 TMO_b0122 f07ee1eb653c4a1686b345ac21ef6951 312 SMART SM00859 5 121 4.4E-13 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_b0122 f07ee1eb653c4a1686b345ac21ef6951 312 Gene3D G3DSA:3.40.50.720 4 303 1.1E-127 T 14-10-2018 TMO_b0122 f07ee1eb653c4a1686b345ac21ef6951 312 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 129 283 1.0E-63 T 14-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 TMO_1284 9c998ea8841878fcf0f00ff61281318d 120 SUPERFAMILY SSF54909 22 91 5.36E-8 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_1284 9c998ea8841878fcf0f00ff61281318d 120 Gene3D G3DSA:3.30.70.100 16 109 4.3E-5 T 14-10-2018 TMO_2567 b95aaf175703c84e1f0b1ac93e312623 358 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 23 326 2.4E-30 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 TMO_2567 b95aaf175703c84e1f0b1ac93e312623 358 SUPERFAMILY SSF55909 7 326 1.61E-36 T 14-10-2018 TMO_2567 b95aaf175703c84e1f0b1ac93e312623 358 Gene3D G3DSA:3.75.10.10 18 337 3.6E-34 T 14-10-2018 TMO_b0392 95f5b95953bcc21e2dc87ae74f5d703a 344 Gene3D G3DSA:3.20.20.100 1 342 1.4E-128 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_b0392 95f5b95953bcc21e2dc87ae74f5d703a 344 Pfam PF00248 Aldo/keto reductase family 16 318 1.3E-65 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_b0392 95f5b95953bcc21e2dc87ae74f5d703a 344 SUPERFAMILY SSF51430 1 319 1.57E-92 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_c0202 0ee7407032a46def4b06d23385fe65cc 185 SUPERFAMILY SSF55729 19 169 1.61E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_c0202 0ee7407032a46def4b06d23385fe65cc 185 Pfam PF00583 Acetyltransferase (GNAT) family 27 142 1.4E-6 T 14-10-2018 IPR000182 GNAT domain TMO_c0202 0ee7407032a46def4b06d23385fe65cc 185 TIGRFAM TIGR04045 MSMEG_0567_GNAT: putative N-acetyltransferase, MSMEG_0567 N-terminal domain family 20 170 9.6E-69 T 14-10-2018 IPR024035 GNAT N-acetyltransferase, putative TMO_c0202 0ee7407032a46def4b06d23385fe65cc 185 Gene3D G3DSA:3.40.630.30 18 165 2.2E-21 T 14-10-2018 TMO_b0474 e864023699fafc45012e34cab7458a5d 394 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 46 363 6.3E-131 T 14-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC TMO_b0474 e864023699fafc45012e34cab7458a5d 394 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 353 4.6E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2233 7f3a8d30d98227f96cdb53085b64a744 171 Pfam PF14342 Domain of unknown function (DUF4396) 31 159 4.1E-40 T 14-10-2018 IPR025509 Domain of unknown function DUF4396 TMO_d0026 1453246bf268c6a6b44f105a51a67d7b 214 SUPERFAMILY SSF102405 63 203 3.97E-23 T 14-10-2018 TMO_d0026 1453246bf268c6a6b44f105a51a67d7b 214 Gene3D G3DSA:3.40.50.450 53 207 3.0E-28 T 14-10-2018 TMO_3179 ec2bc8fbc01ad9c2a3ae83a16061d7dc 192 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 8 192 27.253 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 TMO_3179 ec2bc8fbc01ad9c2a3ae83a16061d7dc 192 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 28 191 1.3E-65 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 TMO_3179 ec2bc8fbc01ad9c2a3ae83a16061d7dc 192 SUPERFAMILY SSF47240 29 160 1.03E-19 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_0798 76ad490285188560b23c281b1afaddd9 207 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 15 192 1.5E-77 T 14-10-2018 IPR018715 Protein of unknown function DUF2239 TMO_0089 096f7409befba889d498f0169bb7a8f2 387 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 100 332 1.7E-21 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 TMO_c0756 00b2a7c530d2757fa25dfb1a60037436 468 Pfam PF00939 Sodium:sulfate symporter transmembrane region 18 466 3.6E-28 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 TMO_b0554 87d305bb2a1724b219a2a4b2839364c8 504 SUPERFAMILY SSF56281 100 191 1.08E-7 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_3399 382a306c069b751dd8bc779eeca3d3fe 294 SUPERFAMILY SSF56601 35 249 2.49E-27 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_3399 382a306c069b751dd8bc779eeca3d3fe 294 ProSitePatterns PS00337 Beta-lactamase class-D active site. 63 73 - T 14-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 TMO_3399 382a306c069b751dd8bc779eeca3d3fe 294 Pfam PF00905 Penicillin binding protein transpeptidase domain 40 250 3.8E-33 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TMO_3399 382a306c069b751dd8bc779eeca3d3fe 294 Gene3D G3DSA:3.40.710.10 35 290 1.8E-73 T 14-10-2018 TMO_3128 f9d270958f0e4dcdceccfdb36d1b2622 213 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 50 188 1.0E-22 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_a0388 7a395771d4511a172dfc091d9a6b43b4 252 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 53 163 2.6E-13 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_0270 ea6c22a0299bf288a50b3dd87af9da5c 515 SUPERFAMILY SSF53850 23 514 2.35E-135 T 14-10-2018 TMO_0270 ea6c22a0299bf288a50b3dd87af9da5c 515 Gene3D G3DSA:3.40.190.10 11 265 1.7E-77 T 14-10-2018 TMO_0270 ea6c22a0299bf288a50b3dd87af9da5c 515 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 420 6.0E-91 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_0270 ea6c22a0299bf288a50b3dd87af9da5c 515 Gene3D G3DSA:3.10.105.10 273 484 2.0E-49 T 14-10-2018 TMO_0270 ea6c22a0299bf288a50b3dd87af9da5c 515 PIRSF PIRSF002741 10 515 1.1E-133 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_a0186 caa9952de6ecf8318274d52883c10799 337 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 42 325 4.2E-43 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system TMO_0165 c27a833b9ecedb3e76fa7002a17e199b 208 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 26 199 1.2E-49 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 TMO_0165 c27a833b9ecedb3e76fa7002a17e199b 208 Pfam PF04279 Intracellular septation protein A 26 197 1.4E-54 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 TMO_0165 c27a833b9ecedb3e76fa7002a17e199b 208 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 26 200 17.64 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 TMO_b0026 ad30c5d1f38de059f123463a0b7969d3 203 Gene3D G3DSA:1.10.3210.10 53 200 1.1E-16 T 14-10-2018 TMO_b0026 ad30c5d1f38de059f123463a0b7969d3 203 SUPERFAMILY SSF109604 25 147 2.66E-22 T 14-10-2018 TMO_b0026 ad30c5d1f38de059f123463a0b7969d3 203 Pfam PF01966 HD domain 70 150 1.7E-7 T 14-10-2018 IPR006674 HD domain TMO_1385 593dd926d1d36ea14926565e774c5792 354 Gene3D G3DSA:3.40.50.1980 157 239 1.3E-22 T 14-10-2018 TMO_1385 593dd926d1d36ea14926565e774c5792 354 Gene3D G3DSA:3.40.50.1980 34 156 8.0E-31 T 14-10-2018 TMO_1385 593dd926d1d36ea14926565e774c5792 354 Gene3D G3DSA:3.40.50.1980 240 352 4.1E-42 T 14-10-2018 TMO_1385 593dd926d1d36ea14926565e774c5792 354 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 349 1.8E-63 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TMO_1385 593dd926d1d36ea14926565e774c5792 354 SUPERFAMILY SSF53807 31 350 3.49E-73 T 14-10-2018 TMO_a0408 92b93e77bcdf2cc6c305e7ac13992b88 252 Gene3D G3DSA:3.40.50.12500 2 245 2.6E-54 T 14-10-2018 TMO_a0408 92b93e77bcdf2cc6c305e7ac13992b88 252 SUPERFAMILY SSF53681 149 214 1.18E-7 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TMO_2113 b201a8df3a144ebcb7bf84b34207973e 491 Pfam PF03734 L,D-transpeptidase catalytic domain 119 248 2.5E-18 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 TMO_2113 b201a8df3a144ebcb7bf84b34207973e 491 Gene3D G3DSA:2.40.440.10 45 325 3.6E-78 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like TMO_2113 b201a8df3a144ebcb7bf84b34207973e 491 SUPERFAMILY SSF141523 113 249 3.01E-30 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like TMO_3084 e3857b6db6333a2787d64a3b31afdc8e 234 Gene3D G3DSA:1.10.8.640 47 127 8.6E-33 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily TMO_3084 e3857b6db6333a2787d64a3b31afdc8e 234 Pfam PF03918 Cytochrome C biogenesis protein 48 184 6.8E-48 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family TMO_0133 2c4059356294363e4449f846caf773e7 206 Pfam PF02698 DUF218 domain 39 159 2.0E-10 T 14-10-2018 IPR003848 Domain of unknown function DUF218 TMO_0687 5e445b88b56b8396fd66af8fe660d2ea 317 Pfam PF00009 Elongation factor Tu GTP binding domain 23 185 5.4E-42 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0687 5e445b88b56b8396fd66af8fe660d2ea 317 SUPERFAMILY SSF52540 22 194 1.04E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_0687 5e445b88b56b8396fd66af8fe660d2ea 317 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 77 92 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site TMO_0687 5e445b88b56b8396fd66af8fe660d2ea 317 Gene3D G3DSA:3.40.50.300 11 205 4.4E-55 T 14-10-2018 TMO_0687 5e445b88b56b8396fd66af8fe660d2ea 317 PRINTS PR00315 GTP-binding elongation factor signature 157 166 3.0E-18 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0687 5e445b88b56b8396fd66af8fe660d2ea 317 PRINTS PR00315 GTP-binding elongation factor signature 26 39 3.0E-18 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0687 5e445b88b56b8396fd66af8fe660d2ea 317 PRINTS PR00315 GTP-binding elongation factor signature 104 114 3.0E-18 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0687 5e445b88b56b8396fd66af8fe660d2ea 317 PRINTS PR00315 GTP-binding elongation factor signature 120 131 3.0E-18 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_0687 5e445b88b56b8396fd66af8fe660d2ea 317 PRINTS PR00315 GTP-binding elongation factor signature 84 92 3.0E-18 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_3256 70a8c97a37a062ccea4036d89c93f4e4 219 Gene3D G3DSA:2.60.120.620 32 215 8.4E-27 T 14-10-2018 TMO_3256 70a8c97a37a062ccea4036d89c93f4e4 219 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 122 214 4.0E-13 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 TMO_3256 70a8c97a37a062ccea4036d89c93f4e4 219 SMART SM00702 33 214 3.0E-6 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 TMO_b0008 553851d4d57fd070e38da9c2699f0594 391 Pfam PF17482 Phage tail sheath C-terminal domain 280 378 2.1E-13 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain TMO_b0008 553851d4d57fd070e38da9c2699f0594 391 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 107 278 9.4E-26 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain TMO_a0221 dd9c3244668b4bd14393c7c1d188be44 439 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 24 433 7.9E-95 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_a0221 dd9c3244668b4bd14393c7c1d188be44 439 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 15 428 7.5E-81 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_a0221 dd9c3244668b4bd14393c7c1d188be44 439 PIRSF PIRSF006066 9 439 1.7E-77 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_1015 3fb05940c5491025780a5f4c42ab4fd3 262 Pfam PF03180 NLPA lipoprotein 27 262 5.2E-95 T 14-10-2018 IPR004872 Lipoprotein NlpA family TMO_1015 3fb05940c5491025780a5f4c42ab4fd3 262 Gene3D G3DSA:3.40.190.10 27 258 3.7E-101 T 14-10-2018 TMO_1015 3fb05940c5491025780a5f4c42ab4fd3 262 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 21 262 3.9E-78 T 14-10-2018 IPR004872 Lipoprotein NlpA family TMO_1015 3fb05940c5491025780a5f4c42ab4fd3 262 Gene3D G3DSA:3.40.190.10 108 212 3.7E-101 T 14-10-2018 TMO_1015 3fb05940c5491025780a5f4c42ab4fd3 262 PIRSF PIRSF002854 1 262 1.1E-105 T 14-10-2018 IPR004872 Lipoprotein NlpA family TMO_1015 3fb05940c5491025780a5f4c42ab4fd3 262 SUPERFAMILY SSF53850 26 262 1.36E-88 T 14-10-2018 TMO_a0533 e71c0b9d42fbb9dcbe666e076b016546 426 Gene3D G3DSA:1.10.443.10 179 399 1.6E-34 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TMO_a0533 e71c0b9d42fbb9dcbe666e076b016546 426 SUPERFAMILY SSF47823 47 171 2.75E-10 T 14-10-2018 TMO_a0533 e71c0b9d42fbb9dcbe666e076b016546 426 Pfam PF00589 Phage integrase family 186 398 1.1E-7 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_a0533 e71c0b9d42fbb9dcbe666e076b016546 426 SUPERFAMILY SSF56349 182 404 4.41E-24 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_0505 7f576eac6f4a2b04dc4318031d4c0623 375 Pfam PF03824 High-affinity nickel-transport protein 97 364 6.6E-36 T 14-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 TMO_a0297 a184bd0a17e57010f0f542439dbce709 275 SUPERFAMILY SSF52540 26 271 2.21E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0297 a184bd0a17e57010f0f542439dbce709 275 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 255 271 7.2E-5 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_a0297 a184bd0a17e57010f0f542439dbce709 275 Pfam PF00005 ABC transporter 41 202 1.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_a0297 a184bd0a17e57010f0f542439dbce709 275 Gene3D G3DSA:3.40.50.300 23 273 3.7E-56 T 14-10-2018 TMO_a0297 a184bd0a17e57010f0f542439dbce709 275 SMART SM00382 50 251 0.001 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_b0201 b4ecf8a7a57f6075a26df22c9537f59c 284 SUPERFAMILY SSF161098 86 266 3.79E-24 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0201 b4ecf8a7a57f6075a26df22c9537f59c 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 272 4.4E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0201 b4ecf8a7a57f6075a26df22c9537f59c 284 Gene3D G3DSA:1.10.3720.10 86 279 1.4E-17 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0322 71f7b069a7fdd22931c2f2660f3361ab 100 Gene3D G3DSA:1.10.3340.10 1 99 8.3E-46 T 14-10-2018 IPR036810 SMc04008-like superfamily TMO_c0322 71f7b069a7fdd22931c2f2660f3361ab 100 SUPERFAMILY SSF158757 3 76 8.11E-37 T 14-10-2018 IPR036810 SMc04008-like superfamily TMO_c0322 71f7b069a7fdd22931c2f2660f3361ab 100 Pfam PF06844 Protein of unknown function (DUF1244) 26 91 2.3E-38 T 14-10-2018 IPR023163 SMc04008-like domain TMO_0517 0038709b5d66dda1463e2a7f8e77e79d 206 Pfam PF02230 Phospholipase/Carboxylesterase 3 198 2.3E-28 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 TMO_0517 0038709b5d66dda1463e2a7f8e77e79d 206 Gene3D G3DSA:3.40.50.1820 1 199 4.3E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_0517 0038709b5d66dda1463e2a7f8e77e79d 206 SUPERFAMILY SSF53474 4 198 1.74E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_b0505 d35cf2c7ae6df0009f28398e17b37e0f 268 SUPERFAMILY SSF56529 9 268 1.22E-49 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_b0505 d35cf2c7ae6df0009f28398e17b37e0f 268 Gene3D G3DSA:3.90.850.10 5 268 9.6E-69 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_c0022 6d711afe8b5da0ae8c0156908a7cc85b 176 Gene3D G3DSA:3.40.630.30 2 174 4.2E-49 T 14-10-2018 TMO_c0022 6d711afe8b5da0ae8c0156908a7cc85b 176 SUPERFAMILY SSF55729 7 155 8.23E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_c0022 6d711afe8b5da0ae8c0156908a7cc85b 176 Pfam PF13527 Acetyltransferase (GNAT) domain 9 137 1.1E-13 T 14-10-2018 TMO_a0183 b6f07d387f4c882a1ada1136e43aba3e 335 SUPERFAMILY SSF53474 19 327 1.8E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0183 b6f07d387f4c882a1ada1136e43aba3e 335 Gene3D G3DSA:3.40.50.1820 39 324 1.3E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0174 00ae08b766bf364d7e1b9d3093766feb 543 SUPERFAMILY SSF46894 162 228 8.84E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_c0174 00ae08b766bf364d7e1b9d3093766feb 543 Gene3D G3DSA:1.10.10.10 101 238 1.1E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_c0174 00ae08b766bf364d7e1b9d3093766feb 543 Pfam PF00196 Bacterial regulatory proteins, luxR family 175 225 1.4E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0174 00ae08b766bf364d7e1b9d3093766feb 543 Pfam PF12697 Alpha/beta hydrolase family 272 525 6.6E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_c0174 00ae08b766bf364d7e1b9d3093766feb 543 SMART SM00421 168 225 1.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_c0174 00ae08b766bf364d7e1b9d3093766feb 543 SUPERFAMILY SSF53474 258 528 2.22E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0174 00ae08b766bf364d7e1b9d3093766feb 543 Gene3D G3DSA:3.40.50.1820 243 531 2.8E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_a0289 847839f87922b6f5edda3e84f4c1c5dc 353 Pfam PF00248 Aldo/keto reductase family 16 320 2.3E-73 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_a0289 847839f87922b6f5edda3e84f4c1c5dc 353 SUPERFAMILY SSF51430 1 319 6.29E-104 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_a0289 847839f87922b6f5edda3e84f4c1c5dc 353 Gene3D G3DSA:3.20.20.100 1 342 4.3E-125 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_a0321 dd70c751158e0512549720a44dd881bd 364 Gene3D G3DSA:3.40.50.2000 171 338 7.1E-6 T 14-10-2018 TMO_a0321 dd70c751158e0512549720a44dd881bd 364 Gene3D G3DSA:3.40.50.2000 15 348 7.1E-6 T 14-10-2018 TMO_a0321 dd70c751158e0512549720a44dd881bd 364 SUPERFAMILY SSF53756 2 354 1.18E-9 T 14-10-2018 TMO_a0321 dd70c751158e0512549720a44dd881bd 364 Pfam PF13524 Glycosyl transferases group 1 254 346 4.1E-20 T 14-10-2018 TMO_a0039 023550bb1bd686764432b27718930bf6 280 Pfam PF09622 Putative integral membrane protein (DUF2391) 19 280 1.2E-86 T 14-10-2018 IPR024464 Protein of unknown function DUF2391 TMO_a0039 023550bb1bd686764432b27718930bf6 280 TIGRFAM TIGR02587 TIGR02587: putative integral membrane protein TIGR02587 13 280 5.8E-87 T 14-10-2018 IPR013416 Conserved hypothetical protein CHP02587, putative integral membrane TMO_c0479 618f8e4122373de8dbb07b08ef519dd8 410 SUPERFAMILY SSF56176 6 185 3.18E-32 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TMO_c0479 618f8e4122373de8dbb07b08ef519dd8 410 Pfam PF01565 FAD binding domain 6 146 7.5E-17 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TMO_c0479 618f8e4122373de8dbb07b08ef519dd8 410 Gene3D G3DSA:3.30.465.40 5 194 7.3E-31 T 14-10-2018 TMO_c0479 618f8e4122373de8dbb07b08ef519dd8 410 SUPERFAMILY SSF55103 188 404 1.01E-20 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 Pfam PF01578 Cytochrome C assembly protein 89 295 2.0E-57 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 646 2.2E-113 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 649 2.9E-198 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 2.1E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 2.1E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 2.1E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 2.1E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.1E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 2.1E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.1E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 2.1E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 7.5E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 7.5E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 7.5E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 7.5E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 639 652 7.5E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 7.5E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_3082 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 7.5E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_1283 f3e96ed7cbba0c5b99513ec239b05acf 230 Pfam PF08279 HTH domain 6 58 1.2E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 TMO_1283 f3e96ed7cbba0c5b99513ec239b05acf 230 Pfam PF13280 WYL domain 135 219 1.4E-16 T 14-10-2018 IPR026881 WYL domain TMO_1283 f3e96ed7cbba0c5b99513ec239b05acf 230 SUPERFAMILY SSF46785 1 61 2.8E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_1283 f3e96ed7cbba0c5b99513ec239b05acf 230 Gene3D G3DSA:1.10.10.10 1 63 3.8E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0290 542d6b822f27f86667b89a21d95b7c96 135 Gene3D G3DSA:3.10.450.50 1 122 2.3E-25 T 14-10-2018 TMO_a0290 542d6b822f27f86667b89a21d95b7c96 135 Pfam PF12680 SnoaL-like domain 11 114 1.2E-10 T 14-10-2018 IPR037401 SnoaL-like domain TMO_a0290 542d6b822f27f86667b89a21d95b7c96 135 SUPERFAMILY SSF54427 3 123 5.57E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_0801 4291fa1f70d8f7ee3c06c08c691025cc 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 282 8.6E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2082 537dc28c0f25ef04a7fa6390262af93d 168 Gene3D G3DSA:1.20.1250.20 1 163 8.0E-16 T 14-10-2018 TMO_2082 537dc28c0f25ef04a7fa6390262af93d 168 SUPERFAMILY SSF103473 2 158 1.96E-23 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_2082 537dc28c0f25ef04a7fa6390262af93d 168 Pfam PF07690 Major Facilitator Superfamily 4 160 1.6E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0918 f62481c16e19c3155d1f1193ab11e835 61 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 49 5.6E-25 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type TMO_c0918 f62481c16e19c3155d1f1193ab11e835 61 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 1.5E-23 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type TMO_b0424 4f9cb290f79d64e5ae3179508a54c96b 423 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 14 417 8.4E-118 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0424 4f9cb290f79d64e5ae3179508a54c96b 423 PIRSF PIRSF006066 1 423 2.2E-121 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0424 4f9cb290f79d64e5ae3179508a54c96b 423 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 5 413 2.7E-104 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_1609 98d551547519b634ee07ad6d479399df 366 Gene3D G3DSA:3.40.190.10 153 324 8.3E-108 T 14-10-2018 TMO_1609 98d551547519b634ee07ad6d479399df 366 Gene3D G3DSA:3.40.190.170 33 339 8.3E-108 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_1609 98d551547519b634ee07ad6d479399df 366 PIRSF PIRSF039026 1 360 7.3E-119 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like TMO_1609 98d551547519b634ee07ad6d479399df 366 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 48 317 1.4E-42 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_3073 c19544706d6d6be54df5c2dc3e7ba3f3 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 32 163 4.7E-17 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_2762 99c9c377860bc57995de7664ce3ce562 253 Pfam PF01903 CbiX 21 125 1.1E-4 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 TMO_2762 99c9c377860bc57995de7664ce3ce562 253 SUPERFAMILY SSF53800 19 134 3.92E-8 T 14-10-2018 TMO_2762 99c9c377860bc57995de7664ce3ce562 253 Gene3D G3DSA:3.40.30.10 155 252 1.8E-20 T 14-10-2018 TMO_2762 99c9c377860bc57995de7664ce3ce562 253 Gene3D G3DSA:3.40.50.1400 12 132 1.1E-8 T 14-10-2018 TMO_2762 99c9c377860bc57995de7664ce3ce562 253 SUPERFAMILY SSF52833 155 249 1.23E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_b0112 d831f96433d58dbff7aabfe6600f2b08 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 420 1.0E-90 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_b0112 d831f96433d58dbff7aabfe6600f2b08 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 47 425 1.2E-89 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0112 d831f96433d58dbff7aabfe6600f2b08 429 PIRSF PIRSF006066 1 429 1.4E-88 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0421 3c9882ddf4e6434fc925f502987ad25b 478 Pfam PF00171 Aldehyde dehydrogenase family 13 470 4.3E-159 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TMO_b0421 3c9882ddf4e6434fc925f502987ad25b 478 Gene3D G3DSA:3.40.309.10 253 442 2.8E-164 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TMO_b0421 3c9882ddf4e6434fc925f502987ad25b 478 SUPERFAMILY SSF53720 2 475 1.44E-160 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TMO_b0421 3c9882ddf4e6434fc925f502987ad25b 478 Gene3D G3DSA:3.40.605.10 9 470 2.8E-164 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_a0450 88b7fb0de6d7dcadee28b4c65d506d2d 159 SUPERFAMILY SSF56209 16 106 1.01E-7 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_0511 3255bdc81c114f42423fc88a97e16fa5 222 Pfam PF00881 Nitroreductase family 44 186 1.2E-14 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TMO_0511 3255bdc81c114f42423fc88a97e16fa5 222 SUPERFAMILY SSF55469 38 221 9.68E-39 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TMO_0511 3255bdc81c114f42423fc88a97e16fa5 222 Gene3D G3DSA:3.40.109.10 29 222 1.1E-41 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TMO_c0030 7cd9a5d53354db614520c649930276a2 506 Pfam PF07916 TraG-like protein, N-terminal region 10 489 1.2E-96 T 14-10-2018 IPR012931 TraG-like, N-terminal TMO_3267 c4b4218f7c279f4d95604334a7468931 112 Pfam PF07883 Cupin domain 32 90 1.3E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_3267 c4b4218f7c279f4d95604334a7468931 112 Gene3D G3DSA:2.60.120.10 17 103 1.8E-13 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_3267 c4b4218f7c279f4d95604334a7468931 112 SUPERFAMILY SSF51182 29 99 1.09E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_3400 d12b6b6bbe559724f48c188fdd533fd4 228 SUPERFAMILY SSF53098 3 169 4.83E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_3400 d12b6b6bbe559724f48c188fdd533fd4 228 SMART SM00479 2 172 9.8E-50 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TMO_3400 d12b6b6bbe559724f48c188fdd533fd4 228 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 2 170 3.9E-49 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3400 d12b6b6bbe559724f48c188fdd533fd4 228 Pfam PF00929 Exonuclease 4 163 1.9E-36 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TMO_3400 d12b6b6bbe559724f48c188fdd533fd4 228 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 224 8.3E-81 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_3400 d12b6b6bbe559724f48c188fdd533fd4 228 Gene3D G3DSA:3.30.420.10 2 172 1.1E-52 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_c0263 6e62e0313f4806dfa9d7540dc3b96dbb 71 Pfam PF09722 Protein of unknown function (DUF2384) 19 68 3.5E-16 T 14-10-2018 IPR024467 Domain of unknown function DUF2384 TMO_a0532 9b69e28aa531973895b778058e3b9b30 203 SUPERFAMILY SSF51161 16 161 3.19E-39 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily TMO_a0532 9b69e28aa531973895b778058e3b9b30 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 98 131 1.2E-9 T 14-10-2018 IPR001451 Hexapeptide repeat TMO_a0532 9b69e28aa531973895b778058e3b9b30 203 Gene3D G3DSA:2.160.10.10 15 180 4.7E-47 T 14-10-2018 TMO_2173 e621db310bdcca0e560a20e9ec094145 223 Pfam PF07751 Abi-like protein 24 169 5.4E-6 T 14-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like TMO_a0494 9d85d74d9335f88191599073402f4875 307 Gene3D G3DSA:3.20.20.70 1 307 5.0E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_a0494 9d85d74d9335f88191599073402f4875 307 Pfam PF05853 beta-keto acid cleavage enzyme 3 298 3.9E-102 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 TMO_c0486 c55c1318e190497ccf48d69977e46ce8 355 Pfam PF00487 Fatty acid desaturase 49 294 9.7E-38 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 TMO_2202 e620eddd4ae739aeb8dd9e5af11380e0 81 SUPERFAMILY SSF47598 30 74 1.28E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_c0812 26538e631c43cdab68473298c878a371 204 Gene3D G3DSA:1.10.3210.10 1 178 9.7E-45 T 14-10-2018 TMO_c0812 26538e631c43cdab68473298c878a371 204 Pfam PF13023 HD domain 17 168 1.1E-38 T 14-10-2018 IPR006674 HD domain TMO_c0812 26538e631c43cdab68473298c878a371 204 SUPERFAMILY SSF109604 7 178 3.43E-38 T 14-10-2018 TMO_c0812 26538e631c43cdab68473298c878a371 204 SMART SM00471 32 153 7.7E-8 T 14-10-2018 IPR003607 HD/PDEase domain TMO_c0345 3ca5f43ca62bf28608f3a0f0f9dec956 325 Pfam PF05853 beta-keto acid cleavage enzyme 21 317 2.3E-106 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 TMO_c0345 3ca5f43ca62bf28608f3a0f0f9dec956 325 Gene3D G3DSA:3.20.20.70 16 324 1.7E-122 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2250 be009e6cda678ad8ad8a58fac49ab86e 54 Gene3D G3DSA:3.40.140.10 1 54 2.2E-21 T 14-10-2018 TMO_2250 be009e6cda678ad8ad8a58fac49ab86e 54 Pfam PF04002 RadC-like JAB domain 2 52 5.8E-20 T 14-10-2018 IPR025657 RadC-like JAB domain TMO_2250 be009e6cda678ad8ad8a58fac49ab86e 54 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 3 8 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site TMO_c0227 37fc1c0d1e0956af0c356b185a836e41 393 Gene3D G3DSA:3.90.380.10 35 357 4.7E-54 T 14-10-2018 TMO_c0227 37fc1c0d1e0956af0c356b185a836e41 393 Pfam PF00355 Rieske [2Fe-2S] domain 55 139 1.1E-19 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_c0227 37fc1c0d1e0956af0c356b185a836e41 393 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 68 83 3.6E-20 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_c0227 37fc1c0d1e0956af0c356b185a836e41 393 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 89 109 3.6E-20 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_c0227 37fc1c0d1e0956af0c356b185a836e41 393 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 38 63 3.6E-20 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_c0227 37fc1c0d1e0956af0c356b185a836e41 393 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 111 131 3.6E-20 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_c0227 37fc1c0d1e0956af0c356b185a836e41 393 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 191 213 3.6E-20 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 TMO_c0227 37fc1c0d1e0956af0c356b185a836e41 393 SUPERFAMILY SSF55961 173 378 1.18E-35 T 14-10-2018 TMO_c0227 37fc1c0d1e0956af0c356b185a836e41 393 SUPERFAMILY SSF50022 24 167 6.15E-48 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_c0227 37fc1c0d1e0956af0c356b185a836e41 393 Gene3D G3DSA:2.102.10.10 51 179 4.7E-54 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TMO_c0227 37fc1c0d1e0956af0c356b185a836e41 393 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 198 380 1.3E-29 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 TMO_2156 68b84670eb61c15380f5975a4d27b8a6 399 Pfam PF03616 Sodium/glutamate symporter 4 370 1.9E-98 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 TMO_2156 68b84670eb61c15380f5975a4d27b8a6 399 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 8 396 4.6E-112 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 TMO_2156 68b84670eb61c15380f5975a4d27b8a6 399 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 399 21.345 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 TMO_a0437 302fb82c25a0207490546c7489c912c8 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 21 152 2.3E-30 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_b0227 987ee47880eb42d43d619c87054710b2 298 Gene3D G3DSA:3.40.50.720 1 290 9.7E-40 T 14-10-2018 TMO_b0227 987ee47880eb42d43d619c87054710b2 298 Pfam PF13460 NAD(P)H-binding 7 116 1.3E-12 T 14-10-2018 IPR016040 NAD(P)-binding domain TMO_b0227 987ee47880eb42d43d619c87054710b2 298 SUPERFAMILY SSF51735 1 285 3.32E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_c0476 0d8f8eec2ea8cd9b754c0419421530d3 282 Gene3D G3DSA:3.40.50.300 93 171 5.6E-13 T 14-10-2018 TMO_c0476 0d8f8eec2ea8cd9b754c0419421530d3 282 SUPERFAMILY SSF53795 93 161 1.1E-11 T 14-10-2018 TMO_0313 5543131430aeeab3ce6326a01b4543c8 392 SUPERFAMILY SSF53335 12 382 1.66E-102 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_0313 5543131430aeeab3ce6326a01b4543c8 392 Gene3D G3DSA:3.40.50.12710 9 384 3.6E-104 T 14-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 TMO_0313 5543131430aeeab3ce6326a01b4543c8 392 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 71 318 5.6E-63 T 14-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 TMO_2312 2f3a8df2b1afe08979ffd7beafabdd24 175 Pfam PF07883 Cupin domain 119 167 8.1E-7 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_2312 2f3a8df2b1afe08979ffd7beafabdd24 175 Gene3D G3DSA:2.60.120.10 38 174 3.7E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_2312 2f3a8df2b1afe08979ffd7beafabdd24 175 SUPERFAMILY SSF51182 106 170 2.97E-10 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_3353 2dfa487dc01c7b37e41ecc79f4e4ab7d 150 Gene3D G3DSA:3.40.630.30 3 149 1.2E-37 T 14-10-2018 TMO_3353 2dfa487dc01c7b37e41ecc79f4e4ab7d 150 Pfam PF00583 Acetyltransferase (GNAT) family 46 136 4.4E-13 T 14-10-2018 IPR000182 GNAT domain TMO_3353 2dfa487dc01c7b37e41ecc79f4e4ab7d 150 SUPERFAMILY SSF55729 6 137 1.42E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_b0157 8d5ab21cbc59c73c139a19944b2635e9 427 SUPERFAMILY SSF48264 17 418 3.67E-48 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_b0157 8d5ab21cbc59c73c139a19944b2635e9 427 Pfam PF00067 Cytochrome P450 291 402 5.1E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_b0157 8d5ab21cbc59c73c139a19944b2635e9 427 Gene3D G3DSA:1.10.630.10 7 426 8.1E-141 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 TMO_a0522 eae210859eeb3e0997f5e80960cfd4c9 268 Gene3D G3DSA:1.10.10.60 167 266 4.1E-18 T 14-10-2018 TMO_a0522 eae210859eeb3e0997f5e80960cfd4c9 268 Pfam PF12833 Helix-turn-helix domain 188 258 4.1E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0522 eae210859eeb3e0997f5e80960cfd4c9 268 Pfam PF12852 Cupin 80 151 9.2E-10 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain TMO_a0522 eae210859eeb3e0997f5e80960cfd4c9 268 SMART SM00342 182 264 1.2E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_a0522 eae210859eeb3e0997f5e80960cfd4c9 268 SUPERFAMILY SSF46689 165 216 1.34E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_3488 970efee5928c78687d0dacf7c79e5156 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 267 2.2E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_3488 970efee5928c78687d0dacf7c79e5156 277 Gene3D G3DSA:1.10.3720.10 12 272 2.1E-50 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3488 970efee5928c78687d0dacf7c79e5156 277 SUPERFAMILY SSF161098 8 276 2.35E-44 T 14-10-2018 IPR035906 MetI-like superfamily TMO_a0165 65a9d8c4c36ddb1b64b17d2749c0cf0c 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 301 5.1E-31 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0712 4533bc68a4daf7320c12d50ee247e490 100 Pfam PF01850 PIN domain 1 91 7.3E-12 T 14-10-2018 IPR002716 PIN domain TMO_c0712 4533bc68a4daf7320c12d50ee247e490 100 SUPERFAMILY SSF88723 1 98 8.97E-27 T 14-10-2018 IPR029060 PIN-like domain superfamily TMO_c0712 4533bc68a4daf7320c12d50ee247e490 100 Gene3D G3DSA:3.40.50.1010 1 99 3.6E-25 T 14-10-2018 TMO_c0182 55dc2315f98f38268df2b7009987e5d5 67 Pfam PF13770 Domain of unknown function (DUF4169) 2 56 4.7E-19 T 14-10-2018 IPR025227 Protein of unknown function DUF4169 TMO_3482 26f43e0cb6ef56d0a3213c6000640725 374 Pfam PF12698 ABC-2 family transporter protein 23 363 1.2E-31 T 14-10-2018 TMO_2821 69cc9588bf2487a22136bea5ea33e521 413 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 13 410 2.3E-142 T 14-10-2018 IPR011718 Glutamate--cysteine ligase GshA TMO_2821 69cc9588bf2487a22136bea5ea33e521 413 Gene3D G3DSA:3.40.50.11280 58 196 1.4E-44 T 14-10-2018 TMO_2821 69cc9588bf2487a22136bea5ea33e521 413 Pfam PF08886 Glutamate-cysteine ligase 12 410 9.6E-160 T 14-10-2018 IPR011718 Glutamate--cysteine ligase GshA TMO_0933 da5442aad0dc75a65eb678370251df36 76 SUPERFAMILY SSF89447 4 65 1.73E-7 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily TMO_c0621 b51b0955b543cd258bf2146a57ba2565 230 Pfam PF02104 SURF1 family 10 211 9.0E-41 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TMO_0260 55bf049fa85c2817856c5b5c770ea17b 331 Gene3D G3DSA:1.20.1510.10 180 248 5.4E-10 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_0260 55bf049fa85c2817856c5b5c770ea17b 331 Gene3D G3DSA:1.20.1510.10 24 176 2.9E-21 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_0260 55bf049fa85c2817856c5b5c770ea17b 331 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 26 299 1.6E-63 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_0260 55bf049fa85c2817856c5b5c770ea17b 331 SUPERFAMILY SSF161111 25 249 3.27E-45 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TMO_0260 55bf049fa85c2817856c5b5c770ea17b 331 Pfam PF01545 Cation efflux family 29 248 8.4E-34 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_2564 b44b1d651a09b7c54fd309d1cdfa0929 309 Pfam PF08904 Domain of unknown function (DUF1849) 56 301 3.9E-65 T 14-10-2018 IPR015000 Protein of unknown function DUF1849 TMO_2930 9eb781da241a98c035214b64eccf67a2 514 Pfam PF00263 Bacterial type II and III secretion system protein 300 448 1.8E-13 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 TMO_2895 cb72ef7390ea71d3691ca225dd85bb47 96 Pfam PF03956 Lysine exporter LysO 6 89 2.4E-6 T 14-10-2018 IPR005642 Lysine exporter LysO TMO_2072 a0d1618d7b2945ac6d5f46439a844796 646 Gene3D G3DSA:2.40.170.20 206 646 5.8E-71 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_2072 a0d1618d7b2945ac6d5f46439a844796 646 Pfam PF00593 TonB dependent receptor 327 645 3.6E-43 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_2072 a0d1618d7b2945ac6d5f46439a844796 646 Gene3D G3DSA:2.170.130.10 42 178 4.7E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TMO_2072 a0d1618d7b2945ac6d5f46439a844796 646 SUPERFAMILY SSF56935 54 646 1.51E-95 T 14-10-2018 TMO_2072 a0d1618d7b2945ac6d5f46439a844796 646 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 166 1.5E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_3054 c19f5dbd3a038bf2c695e5e73bbc522e 165 Gene3D G3DSA:2.30.30.840 1 66 3.5E-23 T 14-10-2018 TMO_3054 c19f5dbd3a038bf2c695e5e73bbc522e 165 SMART SM01058 5 115 2.2E-30 T 14-10-2018 IPR003711 CarD-like/TRCF domain TMO_3054 c19f5dbd3a038bf2c695e5e73bbc522e 165 Gene3D G3DSA:1.20.58.1290 67 162 2.1E-22 T 14-10-2018 TMO_3054 c19f5dbd3a038bf2c695e5e73bbc522e 165 Pfam PF02559 CarD-like/TRCF domain 7 114 9.2E-18 T 14-10-2018 IPR003711 CarD-like/TRCF domain TMO_3054 c19f5dbd3a038bf2c695e5e73bbc522e 165 SUPERFAMILY SSF141259 5 64 5.62E-14 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily TMO_2117 5238160f9e2ff2ca51cde9c931232ef7 149 Gene3D G3DSA:3.30.300.20 42 138 4.9E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta TMO_2117 5238160f9e2ff2ca51cde9c931232ef7 149 Gene3D G3DSA:2.20.25.10 4 35 1.3E-14 T 14-10-2018 TMO_2117 5238160f9e2ff2ca51cde9c931232ef7 149 Pfam PF02566 OsmC-like protein 36 133 2.9E-16 T 14-10-2018 IPR003718 OsmC/Ohr family TMO_2117 5238160f9e2ff2ca51cde9c931232ef7 149 SUPERFAMILY SSF82784 3 138 4.06E-40 T 14-10-2018 IPR036102 OsmC/Ohr superfamily TMO_0672 16353b7042c324e4a9d3a6de1db1900f 430 Gene3D G3DSA:3.20.20.140 57 364 5.3E-161 T 14-10-2018 TMO_0672 16353b7042c324e4a9d3a6de1db1900f 430 SUPERFAMILY SSF51556 56 375 4.4E-106 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_0672 16353b7042c324e4a9d3a6de1db1900f 430 SUPERFAMILY SSF51338 1 407 2.16E-15 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_0672 16353b7042c324e4a9d3a6de1db1900f 430 Pfam PF07969 Amidohydrolase family 44 404 1.0E-47 T 14-10-2018 IPR013108 Amidohydrolase 3 TMO_0672 16353b7042c324e4a9d3a6de1db1900f 430 Gene3D G3DSA:2.30.40.10 9 409 5.3E-161 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TMO_1359 683372feb325f2a697c16420a2587b4d 197 SUPERFAMILY SSF50346 45 172 1.62E-9 T 14-10-2018 IPR011033 PRC-barrel-like superfamily TMO_1359 683372feb325f2a697c16420a2587b4d 197 Gene3D G3DSA:2.30.30.240 75 163 4.8E-17 T 14-10-2018 TMO_1359 683372feb325f2a697c16420a2587b4d 197 Pfam PF05239 PRC-barrel domain 94 144 2.6E-6 T 14-10-2018 IPR027275 PRC-barrel domain TMO_0338 1306d5e4847857b79a2a83ccf3baaa02 122 SUPERFAMILY SSF47413 4 79 2.82E-26 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_0338 1306d5e4847857b79a2a83ccf3baaa02 122 Gene3D G3DSA:1.10.260.40 7 79 4.4E-19 T 14-10-2018 TMO_0338 1306d5e4847857b79a2a83ccf3baaa02 122 SMART SM00530 18 73 4.0E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_0338 1306d5e4847857b79a2a83ccf3baaa02 122 Pfam PF01381 Helix-turn-helix 19 73 1.5E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_c0059 cf257467eaf93d80cc4b0d39b8b99c5b 199 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 61 164 1.0E-41 T 14-10-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 TMO_b0288 4ce74f4bd9f1a1a368df05a9679aaabb 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.4E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0288 4ce74f4bd9f1a1a368df05a9679aaabb 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.4E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0288 4ce74f4bd9f1a1a368df05a9679aaabb 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.4E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0288 4ce74f4bd9f1a1a368df05a9679aaabb 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.4E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0288 4ce74f4bd9f1a1a368df05a9679aaabb 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.4E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_b0288 4ce74f4bd9f1a1a368df05a9679aaabb 293 Gene3D G3DSA:3.40.50.720 1 283 2.3E-69 T 14-10-2018 TMO_b0288 4ce74f4bd9f1a1a368df05a9679aaabb 293 SUPERFAMILY SSF51735 8 253 3.61E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_b0288 4ce74f4bd9f1a1a368df05a9679aaabb 293 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 251 5.2E-45 T 14-10-2018 TMO_2476 288cbab54a29770bb057cebb1a8f6fae 101 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 2 82 4.7E-22 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 TMO_2476 288cbab54a29770bb057cebb1a8f6fae 101 Pfam PF03334 Na+/H+ antiporter subunit 1 73 7.9E-24 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 TMO_b0394 2ed70e3952c710932587ae32685111ae 129 SUPERFAMILY SSF50090 14 117 2.51E-17 T 14-10-2018 IPR008990 Electron transport accessory-like domain superfamily TMO_b0394 2ed70e3952c710932587ae32685111ae 129 Gene3D G3DSA:1.10.472.20 12 122 7.8E-11 T 14-10-2018 TMO_b0394 2ed70e3952c710932587ae32685111ae 129 TIGRFAM TIGR03889 nitrile_acc: nitrile hydratase accessory protein 25 96 1.7E-17 T 14-10-2018 IPR023808 Nitrile hydratase accessory protein, putative TMO_b0394 2ed70e3952c710932587ae32685111ae 129 Pfam PF02211 Nitrile hydratase beta subunit 21 113 1.5E-7 T 14-10-2018 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_c0019 125a42b4a04b156ebdbe7cfa910c5c13 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 9.8E-41 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 TMO_c0019 125a42b4a04b156ebdbe7cfa910c5c13 140 Pfam PF03960 ArsC family 7 115 1.5E-18 T 14-10-2018 IPR006660 Arsenate reductase-like TMO_c0019 125a42b4a04b156ebdbe7cfa910c5c13 140 SUPERFAMILY SSF52833 3 138 8.81E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0019 125a42b4a04b156ebdbe7cfa910c5c13 140 Gene3D G3DSA:3.40.30.10 1 140 5.7E-59 T 14-10-2018 TMO_1881 b1585f668ea51b76d2867f825344e443 222 Gene3D G3DSA:1.10.357.10 9 199 3.7E-31 T 14-10-2018 TMO_1881 b1585f668ea51b76d2867f825344e443 222 SUPERFAMILY SSF46689 7 67 2.41E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_1881 b1585f668ea51b76d2867f825344e443 222 SUPERFAMILY SSF48498 127 188 7.78E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1881 b1585f668ea51b76d2867f825344e443 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 5.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1813 87cf202fcd37a2da4416733c7a1744bd 205 Pfam PF02620 Uncharacterized ACR, COG1399 72 191 6.1E-5 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD TMO_b0100 27ad6a35e0df46642ddcbfcc36d89f81 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 281 1.7E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0100 27ad6a35e0df46642ddcbfcc36d89f81 293 Gene3D G3DSA:1.10.3720.10 19 286 2.7E-51 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0100 27ad6a35e0df46642ddcbfcc36d89f81 293 SUPERFAMILY SSF161098 24 292 6.41E-61 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0554 4b98dcf18de6a9e03d039301287c2a21 308 PIRSF PIRSF018266 2 308 2.0E-35 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_1610 00471b3668012b74139c558c129f25a0 370 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 322 2.0E-50 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_1610 00471b3668012b74139c558c129f25a0 370 Gene3D G3DSA:3.40.190.10 156 327 1.3E-114 T 14-10-2018 TMO_1610 00471b3668012b74139c558c129f25a0 370 PIRSF PIRSF039026 1 363 4.2E-122 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like TMO_1610 00471b3668012b74139c558c129f25a0 370 SUPERFAMILY SSF53850 145 270 1.28E-7 T 14-10-2018 TMO_1610 00471b3668012b74139c558c129f25a0 370 Gene3D G3DSA:3.40.190.170 36 341 1.3E-114 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_c0768 c5e7510eec0a5daef863efa692327aae 408 Pfam PF13458 Periplasmic binding protein 42 377 9.4E-55 T 14-10-2018 IPR028081 Leucine-binding protein domain TMO_c0768 c5e7510eec0a5daef863efa692327aae 408 SUPERFAMILY SSF53822 40 399 2.62E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I TMO_c0768 c5e7510eec0a5daef863efa692327aae 408 Gene3D G3DSA:3.40.50.2300 160 300 4.5E-74 T 14-10-2018 TMO_c0768 c5e7510eec0a5daef863efa692327aae 408 Gene3D G3DSA:3.40.50.2300 50 367 4.5E-74 T 14-10-2018 TMO_b0359 f5e3b3e18bf23d30e692c8b8d6ad2e72 314 SMART SM00046 24 156 3.3E-6 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 TMO_b0359 f5e3b3e18bf23d30e692c8b8d6ad2e72 314 SUPERFAMILY SSF111331 23 314 1.02E-55 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily TMO_b0359 f5e3b3e18bf23d30e692c8b8d6ad2e72 314 Gene3D G3DSA:3.40.50.10330 20 148 1.0E-25 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 TMO_b0359 f5e3b3e18bf23d30e692c8b8d6ad2e72 314 Gene3D G3DSA:2.60.200.40 151 304 2.8E-25 T 14-10-2018 TMO_b0359 f5e3b3e18bf23d30e692c8b8d6ad2e72 314 Pfam PF00781 Diacylglycerol kinase catalytic domain 24 144 7.9E-23 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 TMO_c0298 2422af5d34868e24eb3692212f2832ad 193 Pfam PF06693 Protein of unknown function (DUF1190) 27 192 2.7E-38 T 14-10-2018 IPR009576 Biofilm formation YgiB TMO_3442 8e26ed97a179be72505d9784f5b40207 218 Pfam PF01965 DJ-1/PfpI family 26 215 2.3E-13 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TMO_3442 8e26ed97a179be72505d9784f5b40207 218 SUPERFAMILY SSF52317 2 218 7.98E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_3442 8e26ed97a179be72505d9784f5b40207 218 Gene3D G3DSA:3.40.50.880 1 218 1.0E-68 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like TMO_1743 65e46043f6d8a90f9e5758fb41248cd8 135 Pfam PF07310 PAS domain 2 109 3.2E-5 T 14-10-2018 IPR009922 Protein of unknown function DUF1457 TMO_c0708 6cd1e5905e7cb98d9cd6cfe2f2123080 252 SUPERFAMILY SSF52833 82 248 2.57E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_c0708 6cd1e5905e7cb98d9cd6cfe2f2123080 252 Pfam PF13462 Thioredoxin 89 248 3.7E-27 T 14-10-2018 IPR012336 Thioredoxin-like fold TMO_c0708 6cd1e5905e7cb98d9cd6cfe2f2123080 252 Gene3D G3DSA:3.40.30.10 78 251 2.1E-48 T 14-10-2018 TMO_0410 2a546fce95c53c53b9e972b50563bfdf 185 SUPERFAMILY SSF81342 16 183 4.32E-31 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 TMO_0410 2a546fce95c53c53b9e972b50563bfdf 185 Pfam PF01292 Prokaryotic cytochrome b561 18 179 8.2E-19 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 TMO_0410 2a546fce95c53c53b9e972b50563bfdf 185 Gene3D G3DSA:1.20.950.20 43 171 9.2E-16 T 14-10-2018 TMO_0537 4ceaa1a98d8819078f899cdac6bad5a8 154 Pfam PF00583 Acetyltransferase (GNAT) family 42 143 4.3E-16 T 14-10-2018 IPR000182 GNAT domain TMO_0537 4ceaa1a98d8819078f899cdac6bad5a8 154 Gene3D G3DSA:3.40.630.30 5 154 1.4E-38 T 14-10-2018 TMO_0537 4ceaa1a98d8819078f899cdac6bad5a8 154 SUPERFAMILY SSF55729 2 147 3.77E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_c0942 657918b65eb60e0c805f39e0ab63ae59 52 SUPERFAMILY SSF56801 2 50 2.22E-15 T 14-10-2018 TMO_c0942 657918b65eb60e0c805f39e0ab63ae59 52 Gene3D G3DSA:3.40.50.12780 1 45 2.7E-14 T 14-10-2018 TMO_c0942 657918b65eb60e0c805f39e0ab63ae59 52 Pfam PF00501 AMP-binding enzyme 2 48 4.5E-14 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TMO_c0825 49b7e52b492a510ff2c14fc5ea95be5d 232 Pfam PF08856 Protein of unknown function (DUF1826) 58 228 7.7E-29 T 14-10-2018 IPR014955 Protein of unknown function DUF1826 TMO_1690 704c041cbb692c79227789171a3de0e0 259 SUPERFAMILY SSF55729 130 254 4.12E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_1690 704c041cbb692c79227789171a3de0e0 259 Pfam PF00583 Acetyltransferase (GNAT) family 160 245 4.7E-7 T 14-10-2018 IPR000182 GNAT domain TMO_1690 704c041cbb692c79227789171a3de0e0 259 Gene3D G3DSA:3.40.630.30 25 257 1.7E-27 T 14-10-2018 TMO_a0176 74bc63506c0eee60661211cecba741c7 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 1.2E-95 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_a0176 74bc63506c0eee60661211cecba741c7 429 PIRSF PIRSF006066 1 429 2.9E-104 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_a0176 74bc63506c0eee60661211cecba741c7 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 417 4.9E-84 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_c0780 7875fc02727b7d40b336802d795616d5 206 Gene3D G3DSA:2.60.120.620 19 198 7.3E-25 T 14-10-2018 TMO_c0780 7875fc02727b7d40b336802d795616d5 206 SMART SM00702 20 198 4.4E-7 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 TMO_c0780 7875fc02727b7d40b336802d795616d5 206 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 116 197 9.7E-12 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 TMO_2604 812bbf6d51731f96313d239f82818ef5 131 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 11 122 2.8E-25 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TMO_2604 812bbf6d51731f96313d239f82818ef5 131 TIGRFAM TIGR00494 crcB: protein CrcB 11 122 1.8E-26 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TMO_2604 812bbf6d51731f96313d239f82818ef5 131 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 9 127 18.932 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TMO_c0190 466242c6080001e0f362a8d249674b26 49 Gene3D G3DSA:1.20.5.780 4 48 6.2E-5 T 14-10-2018 TMO_c0247 9f5e0925b7114695e7b519a51eb9bfa7 631 Gene3D G3DSA:3.40.710.10 306 487 1.8E-88 T 14-10-2018 TMO_c0247 9f5e0925b7114695e7b519a51eb9bfa7 631 Gene3D G3DSA:3.30.450.330 246 573 1.8E-88 T 14-10-2018 TMO_c0247 9f5e0925b7114695e7b519a51eb9bfa7 631 Gene3D G3DSA:3.90.1310.30 103 244 1.7E-29 T 14-10-2018 TMO_c0247 9f5e0925b7114695e7b519a51eb9bfa7 631 SUPERFAMILY SSF56601 245 579 4.0E-85 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TMO_c0247 9f5e0925b7114695e7b519a51eb9bfa7 631 SUPERFAMILY SSF56519 106 235 4.32E-32 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TMO_c0247 9f5e0925b7114695e7b519a51eb9bfa7 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 557 9.2E-58 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TMO_c0247 9f5e0925b7114695e7b519a51eb9bfa7 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 108 214 5.7E-10 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TMO_0853 56d444fe72716af74421bd87342307c1 269 SUPERFAMILY SSF56281 1 268 1.57E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_0853 56d444fe72716af74421bd87342307c1 269 Gene3D G3DSA:3.60.15.10 1 269 2.6E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_0853 56d444fe72716af74421bd87342307c1 269 SMART SM00849 23 212 0.0057 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_0853 56d444fe72716af74421bd87342307c1 269 Pfam PF12706 Beta-lactamase superfamily domain 34 235 6.7E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase TMO_2074 ce4450f3dc3750b69c08c13081effc3f 292 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 6 44 1.7E-19 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 TMO_3072 95aa2b7e63b176b8288e68219d586ddd 438 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 434 3.5E-87 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_3072 95aa2b7e63b176b8288e68219d586ddd 438 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 428 1.4E-77 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_3072 95aa2b7e63b176b8288e68219d586ddd 438 PIRSF PIRSF006066 5 438 3.4E-75 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0258 4fe16c54fc1a7917bd830e29b41e1180 153 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 19 148 3.5E-44 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 TMO_b0258 4fe16c54fc1a7917bd830e29b41e1180 153 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 4 150 30.128 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 TMO_c0205 8b93e4e38d60a0be043957de46dc17dc 95 TIGRFAM TIGR04042 MSMEG_0570_fam: MSMEG_0570 family protein 1 87 1.3E-36 T 14-10-2018 IPR023846 Conserved hypothetical protein CHP04042, MSMEG0570 TMO_2756 364219146dc307d9ab1edf8939bdd369 232 Gene3D G3DSA:3.40.30.10 49 232 1.4E-48 T 14-10-2018 TMO_2756 364219146dc307d9ab1edf8939bdd369 232 ProSitePatterns PS00194 Thioredoxin family active site. 77 95 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TMO_2756 364219146dc307d9ab1edf8939bdd369 232 SUPERFAMILY SSF52833 62 228 4.58E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily TMO_2756 364219146dc307d9ab1edf8939bdd369 232 Pfam PF13462 Thioredoxin 63 229 7.4E-42 T 14-10-2018 IPR012336 Thioredoxin-like fold TMO_d0034 b7df5fb7e2fb39be18e1525aa4d62c58 162 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 152 1.8E-22 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_2936 cd1c40b4a63d49289571677e085a2ace 152 Pfam PF02361 Cobalt transport protein 11 146 2.8E-12 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TMO_2286 192a5c94ca72266b2757ff81701bce8b 238 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 13 222 4.0E-34 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain TMO_b0261 0b96aeabfde50e088de94e7cb69053c7 398 Pfam PF01757 Acyltransferase family 33 370 1.3E-29 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 TMO_c0102 91155ab9864e4c3f6713cd206dc35b29 105 Gene3D G3DSA:3.40.50.1100 1 105 2.8E-47 T 14-10-2018 TMO_c0102 91155ab9864e4c3f6713cd206dc35b29 105 SUPERFAMILY SSF53686 2 101 3.93E-32 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_0232 d9585019de16718df69ed8972598b967 209 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 15 191 1.3E-17 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain TMO_0232 d9585019de16718df69ed8972598b967 209 SUPERFAMILY SSF52266 10 199 2.5E-36 T 14-10-2018 TMO_0232 d9585019de16718df69ed8972598b967 209 Gene3D G3DSA:3.40.50.1110 9 206 4.4E-65 T 14-10-2018 IPR036514 SGNH hydrolase superfamily TMO_b0274 d420b8f04eeaff99e792672ab6ebb8be 415 SUPERFAMILY SSF52540 23 348 1.58E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0274 d420b8f04eeaff99e792672ab6ebb8be 415 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 256 336 4.5E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_b0274 d420b8f04eeaff99e792672ab6ebb8be 415 Gene3D G3DSA:3.40.50.300 3 152 1.3E-6 T 14-10-2018 TMO_b0274 d420b8f04eeaff99e792672ab6ebb8be 415 PIRSF PIRSF034888 1 58 5.3E-9 T 14-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 TMO_b0274 d420b8f04eeaff99e792672ab6ebb8be 415 PIRSF PIRSF034888 239 399 2.9E-29 T 14-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 TMO_3350 d056f2f142c72efa2b81a838c76852e6 551 SUPERFAMILY SSF103473 25 414 2.35E-42 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_3350 d056f2f142c72efa2b81a838c76852e6 551 Gene3D G3DSA:1.20.1250.20 20 410 3.6E-33 T 14-10-2018 TMO_3350 d056f2f142c72efa2b81a838c76852e6 551 Pfam PF05977 Transmembrane secretion effector 18 533 3.9E-185 T 14-10-2018 IPR010290 Transmembrane secretion effector TMO_a0474 30166e8f50076041db6d7b95bb7bb363 177 SUPERFAMILY SSF55729 3 148 2.36E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_a0474 30166e8f50076041db6d7b95bb7bb363 177 Gene3D G3DSA:3.40.630.30 1 146 2.1E-34 T 14-10-2018 TMO_a0474 30166e8f50076041db6d7b95bb7bb363 177 Pfam PF13302 Acetyltransferase (GNAT) domain 8 139 1.7E-21 T 14-10-2018 IPR000182 GNAT domain TMO_1646 3e6129f255d1a24c5544c78b093562b2 288 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 272 5.0E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2479 e309354fe0d35635d989123392a1593b 189 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 112 2.3E-23 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like TMO_0828 b3e4ac4cac9940dda2b36d557b624dd6 139 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 54 137 1.2E-36 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 TMO_b0007 8cf4156d2113473f5633e1dc2e683b43 167 Pfam PF04985 Phage tail tube protein FII 5 166 1.6E-52 T 14-10-2018 IPR006498 Tail tube protein TMO_b0007 8cf4156d2113473f5633e1dc2e683b43 167 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 5 166 7.2E-47 T 14-10-2018 IPR006498 Tail tube protein TMO_c0032 38835bd846f58b108be1015fdce2cb87 464 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 48 457 8.2E-177 T 14-10-2018 IPR021204 Integrating conjugative element protein, PFL4711 TMO_1848 1c1f18351b341c5944cd902c2b242da3 384 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 27 380 2.0E-84 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 TMO_1848 1c1f18351b341c5944cd902c2b242da3 384 Pfam PF03739 Predicted permease YjgP/YjgQ family 31 379 1.7E-63 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TMO_1724 c3c11a36781880df107b704b5227c25f 400 Pfam PF02653 Branched-chain amino acid transport system / permease component 69 366 2.3E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_1724 c3c11a36781880df107b704b5227c25f 400 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 63 376 1.7E-136 T 14-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC TMO_c0923 4bd2ccb63d8d8441a562692de6c4a945 241 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 7 233 8.0E-102 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO TMO_c0923 4bd2ccb63d8d8441a562692de6c4a945 241 SUPERFAMILY SSF46626 17 223 4.17E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_c0923 4bd2ccb63d8d8441a562692de6c4a945 241 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 229 3.4E-94 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO TMO_c0923 4bd2ccb63d8d8441a562692de6c4a945 241 Gene3D G3DSA:1.10.760.10 42 233 2.5E-63 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TMO_2451 47e223f2978d5f2dfbd23b9c88bf5416 100 Gene3D G3DSA:1.10.3990.20 5 98 2.5E-15 T 14-10-2018 IPR038268 Ribbon-helix-helix domain superfamily TMO_2451 47e223f2978d5f2dfbd23b9c88bf5416 100 Pfam PF13467 Ribbon-helix-helix domain 10 73 3.0E-24 T 14-10-2018 IPR027373 Ribbon-helix-helix domain TMO_b0567 6610bb7d3c8d4343dc5b6325b4e99067 334 SUPERFAMILY SSF53850 121 249 4.73E-7 T 14-10-2018 TMO_b0567 6610bb7d3c8d4343dc5b6325b4e99067 334 Gene3D G3DSA:3.40.190.170 22 330 9.3E-63 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_b0567 6610bb7d3c8d4343dc5b6325b4e99067 334 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 263 7.6E-28 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_0818 8aae1b0c2c688f5e86c209fc4014e4b3 287 SUPERFAMILY SSF51215 18 158 6.93E-20 T 14-10-2018 IPR037923 Transcription regulator HTH-like TMO_0818 8aae1b0c2c688f5e86c209fc4014e4b3 287 Gene3D G3DSA:1.10.10.60 235 278 1.5E-8 T 14-10-2018 TMO_0818 8aae1b0c2c688f5e86c209fc4014e4b3 287 SUPERFAMILY SSF46689 228 273 1.47E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0818 8aae1b0c2c688f5e86c209fc4014e4b3 287 Gene3D G3DSA:1.10.10.60 175 234 2.8E-16 T 14-10-2018 TMO_0818 8aae1b0c2c688f5e86c209fc4014e4b3 287 SUPERFAMILY SSF46689 176 225 1.79E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_0818 8aae1b0c2c688f5e86c209fc4014e4b3 287 SMART SM00342 191 273 2.7E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0818 8aae1b0c2c688f5e86c209fc4014e4b3 287 Pfam PF12833 Helix-turn-helix domain 197 272 7.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_0818 8aae1b0c2c688f5e86c209fc4014e4b3 287 Pfam PF02311 AraC-like ligand binding domain 30 153 2.9E-19 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_3170 ecfd8a39dc77d379dca7590d4d9296cd 254 Pfam PF14518 Iron-containing redox enzyme 37 229 5.3E-37 T 14-10-2018 TMO_3170 ecfd8a39dc77d379dca7590d4d9296cd 254 SUPERFAMILY SSF48613 3 235 3.64E-38 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_3170 ecfd8a39dc77d379dca7590d4d9296cd 254 SMART SM01236 70 181 1.3E-15 T 14-10-2018 TMO_3170 ecfd8a39dc77d379dca7590d4d9296cd 254 Gene3D G3DSA:1.20.910.10 1 245 1.4E-52 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_a0383 4cc07fbf05241344c7cf9f209b5790c3 173 Gene3D G3DSA:3.10.129.10 14 152 2.1E-15 T 14-10-2018 TMO_a0383 4cc07fbf05241344c7cf9f209b5790c3 173 SUPERFAMILY SSF54637 16 148 5.52E-19 T 14-10-2018 IPR029069 HotDog domain superfamily TMO_1349 3514d93e9e60ae9bab2699382328d05d 376 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 9 370 4.3E-152 T 14-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 TMO_1349 3514d93e9e60ae9bab2699382328d05d 376 Gene3D G3DSA:3.75.10.10 3 371 1.4E-117 T 14-10-2018 TMO_1349 3514d93e9e60ae9bab2699382328d05d 376 Hamap MF_01841 Agmatine deiminase [aguA]. 8 370 53.543 T 14-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 TMO_1349 3514d93e9e60ae9bab2699382328d05d 376 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 16 369 3.1E-104 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 TMO_1349 3514d93e9e60ae9bab2699382328d05d 376 SUPERFAMILY SSF55909 7 370 1.39E-119 T 14-10-2018 TMO_1740 1b5ff72db7c52ee6d2056298152498ca 339 SUPERFAMILY SSF51445 31 302 7.26E-18 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily TMO_1740 1b5ff72db7c52ee6d2056298152498ca 339 Gene3D G3DSA:3.20.20.80 25 305 4.7E-14 T 14-10-2018 TMO_a0263 5d320f2f6ade598e0bf3ba7b8496ef99 89 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 29 64 8.1E-8 T 14-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component TMO_a0263 5d320f2f6ade598e0bf3ba7b8496ef99 89 Pfam PF13470 PIN domain 24 59 5.5E-7 T 14-10-2018 IPR002716 PIN domain TMO_a0222 6aa84329b057494261a731fe50382a13 185 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 36 163 3.1E-21 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_c0917 2a79c62d6b219f66e8f4056f06baa367 328 PIRSF PIRSF006470 3 319 1.9E-66 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 TMO_c0917 2a79c62d6b219f66e8f4056f06baa367 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 308 5.7E-61 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_c0917 2a79c62d6b219f66e8f4056f06baa367 328 Gene3D G3DSA:3.40.190.170 32 327 4.9E-81 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_3387 11b875f038574e9fb47ad3c97e30a605 663 Gene3D G3DSA:1.50.10.20 504 661 3.2E-8 T 14-10-2018 TMO_3387 11b875f038574e9fb47ad3c97e30a605 663 Gene3D G3DSA:1.50.10.20 316 489 6.6E-10 T 14-10-2018 TMO_3387 11b875f038574e9fb47ad3c97e30a605 663 SUPERFAMILY SSF48239 355 653 1.65E-18 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TMO_2079 28cfd969c5b06ba78aa98ace93e2ba8b 314 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 92 264 3.4E-22 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain TMO_2079 28cfd969c5b06ba78aa98ace93e2ba8b 314 Gene3D G3DSA:3.40.50.1110 89 283 1.5E-40 T 14-10-2018 IPR036514 SGNH hydrolase superfamily TMO_2079 28cfd969c5b06ba78aa98ace93e2ba8b 314 SUPERFAMILY SSF52266 88 276 2.11E-40 T 14-10-2018 TMO_1677 ef1efbaf7b62894d722f302ce726b249 225 Pfam PF02223 Thymidylate kinase 10 209 6.3E-42 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 TMO_1677 ef1efbaf7b62894d722f302ce726b249 225 Hamap MF_00165 Thymidylate kinase [tmk]. 6 217 28.23 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TMO_1677 ef1efbaf7b62894d722f302ce726b249 225 Gene3D G3DSA:3.40.50.300 2 217 4.9E-61 T 14-10-2018 TMO_1677 ef1efbaf7b62894d722f302ce726b249 225 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TMO_1677 ef1efbaf7b62894d722f302ce726b249 225 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 5 209 1.8E-45 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TMO_1677 ef1efbaf7b62894d722f302ce726b249 225 SUPERFAMILY SSF52540 5 216 2.06E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2396 58403fa6cc6a97366dcdef70ce9ee452 83 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 9 79 3.6E-33 T 14-10-2018 IPR018753 Azospirillum phage Cd, Gp10 TMO_2396 58403fa6cc6a97366dcdef70ce9ee452 83 Hamap MF_00797 UPF0335 protein . 3 80 20.204 T 14-10-2018 IPR018753 Azospirillum phage Cd, Gp10 TMO_0995 31dd18643c3192b4ad64d851878c8bc4 372 Gene3D G3DSA:3.40.50.2000 43 361 3.6E-64 T 14-10-2018 TMO_0995 31dd18643c3192b4ad64d851878c8bc4 372 Gene3D G3DSA:3.40.50.2000 178 352 3.6E-64 T 14-10-2018 TMO_0995 31dd18643c3192b4ad64d851878c8bc4 372 Pfam PF00534 Glycosyl transferases group 1 188 345 2.0E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 TMO_0995 31dd18643c3192b4ad64d851878c8bc4 372 Pfam PF13439 Glycosyltransferase Family 4 43 180 3.8E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TMO_0995 31dd18643c3192b4ad64d851878c8bc4 372 SUPERFAMILY SSF53756 34 367 2.86E-72 T 14-10-2018 TMO_3129 cabeb279198b0d93ecb4592289cdfeff 439 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 429 2.8E-82 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_3129 cabeb279198b0d93ecb4592289cdfeff 439 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 432 5.3E-82 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_3129 cabeb279198b0d93ecb4592289cdfeff 439 PIRSF PIRSF006066 5 439 7.5E-79 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_1511 eb32f59bf7e9d1d8e46a7d109764952a 309 Pfam PF02616 Segregation and condensation protein ScpA 44 281 2.0E-12 T 14-10-2018 IPR003768 Segregation and condensation protein A TMO_2310 c9b4368fda70d47081e892bf2dcdd535 176 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 157 3.2E-18 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_2881 3348124d894f726315a1084cbab2ea8d 297 Pfam PF14257 Domain of unknown function (DUF4349) 17 288 1.3E-45 T 14-10-2018 IPR025645 Domain of unknown function DUF4349 TMO_1985 460362ef8e79b894f76401dd645012e9 539 SUPERFAMILY SSF51126 26 408 1.42E-11 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor TMO_1985 460362ef8e79b894f76401dd645012e9 539 Gene3D G3DSA:2.160.20.10 32 534 2.7E-14 T 14-10-2018 IPR012334 Pectin lyase fold TMO_1442 e732fd7164baa6ec68d3543e79085219 563 Pfam PF00860 Permease family 16 387 9.7E-34 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 TMO_a0018 513ada347a4ca4305c6354cb981675d1 102 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 1 41 2.6E-12 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family TMO_1170 4312ff3ecb8473487df2f1c47101a92f 243 Gene3D G3DSA:3.40.50.720 82 229 3.2E-47 T 14-10-2018 TMO_1170 4312ff3ecb8473487df2f1c47101a92f 243 Pfam PF13478 XdhC Rossmann domain 83 224 1.9E-40 T 14-10-2018 IPR027051 XdhC Rossmann domain TMO_1954 dee701c24afb42ccda6e0a55facef704 430 PIRSF PIRSF005353 1 430 1.4E-181 T 14-10-2018 IPR026033 Purine permease PbuG-like TMO_1954 dee701c24afb42ccda6e0a55facef704 430 Pfam PF00860 Permease family 18 391 1.9E-51 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 TMO_0090 b42561b86e97761dec7836e4dc46410e 279 Pfam PF01925 Sulfite exporter TauE/SafE 20 255 1.0E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_1895 57d4ab47507bcba533d681da0f7d645e 237 Pfam PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA 65 236 1.2E-84 T 14-10-2018 IPR018655 Protein of unknown function DUF2086 TMO_1895 57d4ab47507bcba533d681da0f7d645e 237 Gene3D G3DSA:2.60.120.620 91 233 3.4E-8 T 14-10-2018 TMO_c0740 4673077955212cb852c036ff89fc146a 115 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 14 114 4.3E-24 T 14-10-2018 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 Reactome: R-HSA-6799198 TMO_0458 ef370c7e0364da2b1d9a727e076509ed 146 Gene3D G3DSA:1.10.490.10 16 130 4.5E-36 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_0458 ef370c7e0364da2b1d9a727e076509ed 146 SUPERFAMILY SSF46458 21 127 1.58E-21 T 14-10-2018 IPR009050 Globin-like superfamily TMO_2952 b11ff2368fff5b15e467ba88aeda3678 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 268 1.2E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2952 b11ff2368fff5b15e467ba88aeda3678 285 Gene3D G3DSA:1.10.3720.10 84 274 2.5E-35 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2952 b11ff2368fff5b15e467ba88aeda3678 285 SUPERFAMILY SSF161098 87 271 3.01E-42 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0213 eb00907ea25b3ca2414a9687cd8b6f59 146 PIRSF PIRSF000027 7 146 4.7E-32 T 14-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 TMO_0213 eb00907ea25b3ca2414a9687cd8b6f59 146 Gene3D G3DSA:1.20.120.10 22 145 1.1E-36 T 14-10-2018 TMO_0213 eb00907ea25b3ca2414a9687cd8b6f59 146 SUPERFAMILY SSF47175 23 144 2.06E-34 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 TMO_0213 eb00907ea25b3ca2414a9687cd8b6f59 146 PRINTS PR00608 Class II cytochrome C signature 133 144 6.7E-8 T 14-10-2018 IPR015984 Cytochrome c prime, subgroup TMO_0213 eb00907ea25b3ca2414a9687cd8b6f59 146 PRINTS PR00608 Class II cytochrome C signature 110 133 6.7E-8 T 14-10-2018 IPR015984 Cytochrome c prime, subgroup TMO_0213 eb00907ea25b3ca2414a9687cd8b6f59 146 Pfam PF01322 Cytochrome C' 27 144 1.2E-33 T 14-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 TMO_c0029 2a1e6c4ab8a7b1da9902d3c96c92d0e7 121 Pfam PF12553 Protein of unknown function (DUF3742) 1 105 4.3E-42 T 14-10-2018 IPR022213 Protein of unknown function DUF3742 TMO_c0930 b75065032ae906b030f61c20ca3579ca 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 328 3.7E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0902 7d120ff6403864c706a2f3adedd5f8db 730 Gene3D G3DSA:2.40.50.100 472 602 3.5E-10 T 14-10-2018 TMO_c0902 7d120ff6403864c706a2f3adedd5f8db 730 Gene3D G3DSA:2.40.30.170 468 645 3.5E-10 T 14-10-2018 TMO_c0902 7d120ff6403864c706a2f3adedd5f8db 730 Gene3D G3DSA:1.10.287.470 506 565 3.5E-10 T 14-10-2018 TMO_1123 03ef5c15a5d95d4ea7726bd84cdbada7 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 104 14.548 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TMO_1123 03ef5c15a5d95d4ea7726bd84cdbada7 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 4.0E-5 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TMO_1123 03ef5c15a5d95d4ea7726bd84cdbada7 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 4.0E-5 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TMO_1123 03ef5c15a5d95d4ea7726bd84cdbada7 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 28 104 2.3E-21 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TMO_c0316 5f86c682e3aba826dd51bfb4a0fb77b6 532 Gene3D G3DSA:1.20.910.10 313 504 1.0E-12 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_c0316 5f86c682e3aba826dd51bfb4a0fb77b6 532 SUPERFAMILY SSF48613 332 424 2.26E-6 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TMO_1221 8c9f2e737daa7a7018903f14d392c388 70 Pfam PF12073 Protein of unknown function (DUF3553) 13 60 1.6E-23 T 14-10-2018 IPR021938 Protein of unknown function DUF3553 TMO_b0136 82c72ef5f83c38d6ef35a7208c218c92 201 Pfam PF01810 LysE type translocator 15 199 8.7E-25 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_1593 6920d2ed2c88ea8c9288c768a519cd4a 263 Gene3D G3DSA:3.20.20.70 22 259 3.0E-51 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_1593 6920d2ed2c88ea8c9288c768a519cd4a 263 SUPERFAMILY SSF63892 26 250 8.5E-42 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 TMO_1593 6920d2ed2c88ea8c9288c768a519cd4a 263 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 27 247 1.1E-48 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 TMO_0244 9e0199799501e5053c0736e93b63f0bd 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 1.1E-144 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0244 9e0199799501e5053c0736e93b63f0bd 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 3.2E-122 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_0244 9e0199799501e5053c0736e93b63f0bd 431 PIRSF PIRSF006066 1 427 1.3E-155 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_b0404 36ddccc1bd3d89773bc1c7a71e2e63a1 504 Pfam PF01425 Amidase 67 488 1.4E-101 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0404 36ddccc1bd3d89773bc1c7a71e2e63a1 504 SUPERFAMILY SSF75304 33 502 2.22E-112 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_b0404 36ddccc1bd3d89773bc1c7a71e2e63a1 504 ProSitePatterns PS00571 Amidases signature. 169 200 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TMO_b0404 36ddccc1bd3d89773bc1c7a71e2e63a1 504 Gene3D G3DSA:3.90.1300.10 58 503 5.6E-135 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_a0587 840ebd75c0e2b7264430eb770574efb7 489 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 235 363 1.2E-7 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT TMO_0802 6302fd7a2ccb6ddce59a03e117081e83 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 297 7.9E-18 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_1926 a7e15399cc7139b432369e4c98efc6f9 384 Gene3D G3DSA:3.40.50.300 111 241 2.2E-23 T 14-10-2018 TMO_1926 a7e15399cc7139b432369e4c98efc6f9 384 SUPERFAMILY SSF52540 139 242 7.44E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2469 82323fe8da48be4f214d8b25befa650b 115 SUPERFAMILY SSF47226 3 112 6.67E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_2469 82323fe8da48be4f214d8b25befa650b 115 Pfam PF01627 Hpt domain 30 102 1.0E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TMO_2469 82323fe8da48be4f214d8b25befa650b 115 Gene3D G3DSA:1.20.120.160 4 111 5.7E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 TMO_1339 9a2c96d2601ff4d21d06c3ba8d6e5360 236 Pfam PF13505 Outer membrane protein beta-barrel domain 9 236 4.3E-16 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel TMO_1339 9a2c96d2601ff4d21d06c3ba8d6e5360 236 SUPERFAMILY SSF56925 39 236 1.7E-27 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TMO_1339 9a2c96d2601ff4d21d06c3ba8d6e5360 236 Gene3D G3DSA:2.40.160.20 36 236 7.4E-33 T 14-10-2018 TMO_b0433 7dfaa0236c4526b4b3df2b2e873d0d5f 255 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 241 7.3E-57 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_b0433 7dfaa0236c4526b4b3df2b2e873d0d5f 255 Gene3D G3DSA:3.20.20.60 1 254 5.3E-89 T 14-10-2018 TMO_b0433 7dfaa0236c4526b4b3df2b2e873d0d5f 255 SUPERFAMILY SSF51621 3 253 8.17E-82 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_1310 bb80a3f2787dd69454b1652aeae4ae2a 67 Pfam PF08898 Domain of unknown function (DUF1843) 15 58 7.3E-10 T 14-10-2018 IPR014994 Domain of unknown function DUF1843 TMO_b0428 d46a2b056d31b25a322a420f66749cfb 291 SUPERFAMILY SSF54593 7 128 7.05E-9 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0428 d46a2b056d31b25a322a420f66749cfb 291 Gene3D G3DSA:3.10.180.10 6 126 1.3E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0428 d46a2b056d31b25a322a420f66749cfb 291 Gene3D G3DSA:3.10.180.10 136 256 1.8E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_b0428 d46a2b056d31b25a322a420f66749cfb 291 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 139 245 1.7E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_b0428 d46a2b056d31b25a322a420f66749cfb 291 SUPERFAMILY SSF54593 133 253 3.71E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_0157 b85aa4fee5a1efb7496acfd0baf5c0bd 273 Gene3D G3DSA:3.90.280.10 122 269 4.7E-9 T 14-10-2018 IPR036610 PEBP-like superfamily TMO_2596 4cb678498b4a262a374a57d2b9945d58 121 PRINTS PR00112 Acylphosphatase signature 33 48 3.3E-7 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TMO_2596 4cb678498b4a262a374a57d2b9945d58 121 PRINTS PR00112 Acylphosphatase signature 54 79 3.3E-7 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TMO_2596 4cb678498b4a262a374a57d2b9945d58 121 Pfam PF00708 Acylphosphatase 36 112 5.9E-22 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TMO_2596 4cb678498b4a262a374a57d2b9945d58 121 ProSitePatterns PS00151 Acylphosphatase signature 2. 62 78 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TMO_2596 4cb678498b4a262a374a57d2b9945d58 121 Gene3D G3DSA:3.30.70.100 11 118 3.4E-27 T 14-10-2018 TMO_2596 4cb678498b4a262a374a57d2b9945d58 121 SUPERFAMILY SSF54975 32 117 1.29E-23 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TMO_2823 6efd1a4c43460206afae03115e472bce 318 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 29 311 2.4E-105 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 TMO_2823 6efd1a4c43460206afae03115e472bce 318 Pfam PF01040 UbiA prenyltransferase family 48 294 1.2E-53 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 TMO_2823 6efd1a4c43460206afae03115e472bce 318 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 88 110 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site TMO_2823 6efd1a4c43460206afae03115e472bce 318 Gene3D G3DSA:1.20.120.1780 194 315 2.8E-13 T 14-10-2018 TMO_2823 6efd1a4c43460206afae03115e472bce 318 Gene3D G3DSA:1.10.357.140 45 192 9.7E-43 T 14-10-2018 TMO_2823 6efd1a4c43460206afae03115e472bce 318 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 24 313 27.457 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 TMO_0838 b31c84c0af1212bdb1e43a690ff97982 195 Pfam PF09523 Protein of unknown function (DUF2390) 17 126 8.1E-25 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 TMO_0838 b31c84c0af1212bdb1e43a690ff97982 195 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 21 125 2.3E-18 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 TMO_1678 a20d178c5fe0b610b9587fa4d555dbb9 375 SUPERFAMILY SSF52540 14 249 1.84E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1678 a20d178c5fe0b610b9587fa4d555dbb9 375 Gene3D G3DSA:3.40.50.300 15 208 2.0E-45 T 14-10-2018 TMO_1678 a20d178c5fe0b610b9587fa4d555dbb9 375 Pfam PF13177 DNA polymerase III, delta subunit 25 208 8.8E-30 T 14-10-2018 TMO_c0342 3f40e369c91cf3396562a81b48b8e254 64 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 3 62 4.9E-9 T 14-10-2018 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 TMO_0364 9ace004977594f990607c61d30097452 397 Gene3D G3DSA:1.20.1250.20 10 381 8.0E-44 T 14-10-2018 TMO_0364 9ace004977594f990607c61d30097452 397 SUPERFAMILY SSF103473 8 382 4.19E-51 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0364 9ace004977594f990607c61d30097452 397 Pfam PF07690 Major Facilitator Superfamily 14 346 1.4E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_3410 15861a3f0095f91bcd8ce107005b8df9 231 Pfam PF01738 Dienelactone hydrolase family 15 228 4.8E-49 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 TMO_3410 15861a3f0095f91bcd8ce107005b8df9 231 Gene3D G3DSA:3.40.50.1820 2 229 2.0E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_3410 15861a3f0095f91bcd8ce107005b8df9 231 SUPERFAMILY SSF53474 3 228 3.35E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_c0829 7127108478effc87724129bf3339ef0b 307 Pfam PF00892 EamA-like transporter family 34 143 3.9E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_c0829 7127108478effc87724129bf3339ef0b 307 Pfam PF00892 EamA-like transporter family 160 292 4.8E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_c0829 7127108478effc87724129bf3339ef0b 307 SUPERFAMILY SSF103481 47 146 9.02E-11 T 14-10-2018 TMO_c0829 7127108478effc87724129bf3339ef0b 307 SUPERFAMILY SSF103481 201 294 2.09E-6 T 14-10-2018 TMO_1121 a6ae567e1c525ce62478bd5099bbc66d 140 Pfam PF00460 Flagella basal body rod protein 7 24 2.1E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TMO_1121 a6ae567e1c525ce62478bd5099bbc66d 140 PIRSF PIRSF002889 1 136 9.8E-17 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 TMO_1917 c55a77903fbaedcdc66ed054ecdfeefd 562 Pfam PF00437 Type II/IV secretion system protein 208 469 5.4E-58 T 14-10-2018 IPR001482 Type II/IV secretion system protein TMO_1917 c55a77903fbaedcdc66ed054ecdfeefd 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 397 411 - T 14-10-2018 IPR001482 Type II/IV secretion system protein TMO_1917 c55a77903fbaedcdc66ed054ecdfeefd 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 53 152 1.9E-11 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal TMO_1917 c55a77903fbaedcdc66ed054ecdfeefd 562 SMART SM00382 330 451 0.0023 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_1917 c55a77903fbaedcdc66ed054ecdfeefd 562 SUPERFAMILY SSF52540 195 555 2.7E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1917 c55a77903fbaedcdc66ed054ecdfeefd 562 Gene3D G3DSA:3.40.50.300 305 557 4.8E-76 T 14-10-2018 TMO_1917 c55a77903fbaedcdc66ed054ecdfeefd 562 SUPERFAMILY SSF160246 14 149 7.85E-17 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily TMO_1917 c55a77903fbaedcdc66ed054ecdfeefd 562 Gene3D G3DSA:3.30.450.90 173 302 8.8E-33 T 14-10-2018 TMO_2859 0eafe26a5d8ecf175a8cb51a91481a39 323 Gene3D G3DSA:3.20.20.70 10 320 1.7E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2859 0eafe26a5d8ecf175a8cb51a91481a39 323 Pfam PF05853 beta-keto acid cleavage enzyme 15 312 9.3E-103 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 TMO_1737 7394df0aa80a9fbce395dd53267aee52 670 Gene3D G3DSA:3.40.50.300 440 663 5.3E-18 T 14-10-2018 TMO_1737 7394df0aa80a9fbce395dd53267aee52 670 SUPERFAMILY SSF52540 510 665 3.83E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0268 2f733a8317504cab19242415c077bbaa 530 Gene3D G3DSA:3.40.190.10 26 284 1.3E-74 T 14-10-2018 TMO_b0268 2f733a8317504cab19242415c077bbaa 530 PIRSF PIRSF002741 12 530 4.5E-144 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_b0268 2f733a8317504cab19242415c077bbaa 530 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 438 3.5E-93 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain TMO_b0268 2f733a8317504cab19242415c077bbaa 530 SUPERFAMILY SSF53850 32 528 1.05E-136 T 14-10-2018 TMO_b0268 2f733a8317504cab19242415c077bbaa 530 Gene3D G3DSA:3.10.105.10 285 497 1.8E-52 T 14-10-2018 TMO_0481 217c9c55318517aedab948a0fa1b84bc 172 Gene3D G3DSA:3.40.50.960 14 166 5.2E-47 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_0481 217c9c55318517aedab948a0fa1b84bc 172 SUPERFAMILY SSF52121 20 163 1.31E-41 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_0481 217c9c55318517aedab948a0fa1b84bc 172 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 15 163 22.331 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_0481 217c9c55318517aedab948a0fa1b84bc 172 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 21 156 1.3E-35 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TMO_c0428 f784c5f1260df7c10221079931665149 114 Gene3D G3DSA:3.30.160.190 10 89 5.5E-23 T 14-10-2018 IPR038532 NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TMO_c0428 f784c5f1260df7c10221079931665149 114 Pfam PF04800 ETC complex I subunit conserved region 13 87 4.4E-19 T 14-10-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 TMO_2375 28e8a635271bb70dc66fd09b28ee92e3 138 Pfam PF07030 Protein of unknown function (DUF1320) 2 110 8.6E-32 T 14-10-2018 IPR009752 Bacteriophage Mu, Gp36 TMO_2213 ea5b049e98367b492c8218b2ee454a9b 250 SUPERFAMILY SSF52540 50 167 7.57E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_2213 ea5b049e98367b492c8218b2ee454a9b 250 Gene3D G3DSA:3.40.50.300 60 166 4.0E-15 T 14-10-2018 TMO_2213 ea5b049e98367b492c8218b2ee454a9b 250 PIRSF PIRSF034285 1 250 1.9E-72 T 14-10-2018 IPR017026 Inducible mutagenesis protein A TMO_0877 d321e7d0ad61cfcffcfa3f36180c9a33 136 SUPERFAMILY SSF103088 25 119 5.76E-9 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_0877 d321e7d0ad61cfcffcfa3f36180c9a33 136 Pfam PF00691 OmpA family 42 124 7.5E-8 T 14-10-2018 IPR006665 OmpA-like domain TMO_0877 d321e7d0ad61cfcffcfa3f36180c9a33 136 Gene3D G3DSA:3.30.1330.60 18 126 6.5E-9 T 14-10-2018 IPR036737 OmpA-like domain superfamily TMO_c0331 80f8aa9d23cebc001b88fceeb1263705 115 Pfam PF10048 Predicted integral membrane protein (DUF2282) 54 101 8.1E-23 T 14-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane TMO_0557 39ec7cab2c9485bf6a27e877a3fc660a 184 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 38 142 5.6E-25 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_3518 ea1159e70a3cf61d971bb6b28eda1508 139 Pfam PF07681 DoxX 15 95 3.2E-14 T 14-10-2018 IPR032808 DoxX family TMO_0797 5680756fe9a44724d9cf6f0e48c9c38d 114 Gene3D G3DSA:3.40.1440.10 19 111 1.1E-10 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TMO_b0055 1d0391e0fc4ab30c0a7ed3a11a24bb90 292 SUPERFAMILY SSF51182 77 144 7.24E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_1308 ebf8366ec395eb5b91cf6abef972161b 62 Pfam PF08898 Domain of unknown function (DUF1843) 8 52 1.4E-8 T 14-10-2018 IPR014994 Domain of unknown function DUF1843 TMO_2256 d091de94a9df3fa7a1310e385d1bad79 260 Gene3D G3DSA:3.40.50.720 8 260 1.4E-55 T 14-10-2018 TMO_2256 d091de94a9df3fa7a1310e385d1bad79 260 SUPERFAMILY SSF51735 12 258 4.56E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily TMO_2256 d091de94a9df3fa7a1310e385d1bad79 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 6.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2256 d091de94a9df3fa7a1310e385d1bad79 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 6.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2256 d091de94a9df3fa7a1310e385d1bad79 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 6.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2256 d091de94a9df3fa7a1310e385d1bad79 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 6.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_2256 d091de94a9df3fa7a1310e385d1bad79 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 257 5.2E-81 T 14-10-2018 TMO_2256 d091de94a9df3fa7a1310e385d1bad79 260 PIRSF PIRSF000094 7 260 1.2E-85 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TMO_a0073 92b070fb0310bd6818fdf7107982bd87 658 Gene3D G3DSA:3.40.50.410 233 423 2.5E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TMO_a0073 92b070fb0310bd6818fdf7107982bd87 658 SUPERFAMILY SSF53300 235 394 3.24E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TMO_0691 6862c9bd4425a538e400584526ca16c5 381 SUPERFAMILY SSF53901 5 219 1.98E-20 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0691 6862c9bd4425a538e400584526ca16c5 381 SUPERFAMILY SSF53901 247 370 4.87E-15 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0691 6862c9bd4425a538e400584526ca16c5 381 Gene3D G3DSA:3.40.47.10 2 377 5.5E-105 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 TMO_0691 6862c9bd4425a538e400584526ca16c5 381 PIRSF PIRSF000429 1 376 4.1E-14 T 14-10-2018 IPR002155 Thiolase GO:0016747 TMO_1058 def5ab5de45903dbc48b5ff0012e35e4 209 Pfam PF01810 LysE type translocator 21 200 1.2E-20 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_3549 bb20596a54e0d0dffc4c20f68cd48b41 167 Pfam PF02915 Rubrerythrin 24 146 1.1E-21 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 TMO_3549 bb20596a54e0d0dffc4c20f68cd48b41 167 Gene3D G3DSA:1.20.1260.10 12 152 8.7E-42 T 14-10-2018 IPR012347 Ferritin-like TMO_3549 bb20596a54e0d0dffc4c20f68cd48b41 167 SUPERFAMILY SSF47240 17 153 2.23E-31 T 14-10-2018 IPR009078 Ferritin-like superfamily TMO_b0024 f5e20a27cbf1aaf90f6bf4b14dbf00a1 297 Gene3D G3DSA:3.40.50.300 32 286 3.0E-58 T 14-10-2018 TMO_b0024 f5e20a27cbf1aaf90f6bf4b14dbf00a1 297 Pfam PF00005 ABC transporter 54 195 2.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_b0024 f5e20a27cbf1aaf90f6bf4b14dbf00a1 297 SUPERFAMILY SSF52540 33 261 2.47E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_b0024 f5e20a27cbf1aaf90f6bf4b14dbf00a1 297 SMART SM00382 62 246 4.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain TMO_2048 20da1b2db1d33e4162aa0695e8cb268d 441 Pfam PF11862 Domain of unknown function (DUF3382) 19 113 7.2E-19 T 14-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal TMO_2048 20da1b2db1d33e4162aa0695e8cb268d 441 Pfam PF02653 Branched-chain amino acid transport system / permease component 126 410 8.7E-52 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_3344 bff9a051ed744e87f02ba84759f1cacd 235 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 11 219 1.7E-34 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain TMO_c0810 70787416a396565f056e5426ab1ec315 159 Pfam PF16156 Domain of unknown function (DUF4864) 52 149 3.5E-23 T 14-10-2018 IPR032347 Protein of unknown function DUF4864 TMO_a0198 01f8b2842a22919ee1a785d9657391de 755 Pfam PF07715 TonB-dependent Receptor Plug Domain 105 209 2.3E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain TMO_a0198 01f8b2842a22919ee1a785d9657391de 755 Gene3D G3DSA:2.40.170.20 94 755 1.2E-149 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TMO_a0198 01f8b2842a22919ee1a785d9657391de 755 SUPERFAMILY SSF56935 81 755 2.24E-109 T 14-10-2018 TMO_a0198 01f8b2842a22919ee1a785d9657391de 755 Pfam PF00593 TonB dependent receptor 313 752 1.2E-41 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TMO_1688 77f7bc1946c440aa66fd67a2bb475bd3 238 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 24 232 2.1E-65 T 14-10-2018 IPR006214 Bax inhibitor 1-related TMO_1209 7ed5cda95c27aca07da209154839eba8 106 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 99 4.6E-16 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD TMO_0053 1dc3cf7b7f4f8fa625210123c88342e0 536 Pfam PF12236 Bacteriophage head to tail connecting protein 18 488 1.2E-124 T 14-10-2018 IPR020991 Head-to-tail connector protein, podovirus-type TMO_2759 7a9e0ee619df1e7d40c2c1702afd910b 1264 Pfam PF02514 CobN/Magnesium Chelatase 139 1243 0.0 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 TMO_2759 7a9e0ee619df1e7d40c2c1702afd910b 1264 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 1 1257 0.0 T 14-10-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 TMO_b0237 ece24dda873bab6a07f4e953188c0c6c 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 6.6E-25 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_b0030 98e706bc436643fbb317f16088b486db 398 Gene3D G3DSA:1.20.1250.20 21 395 4.0E-39 T 14-10-2018 TMO_b0030 98e706bc436643fbb317f16088b486db 398 SUPERFAMILY SSF103473 22 397 1.02E-46 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_b0030 98e706bc436643fbb317f16088b486db 398 Pfam PF07690 Major Facilitator Superfamily 29 271 1.9E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_a0566 8952dd37d0b68551ce7a3bbdeb6b850c 180 Gene3D G3DSA:1.10.10.10 21 164 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_a0566 8952dd37d0b68551ce7a3bbdeb6b850c 180 SUPERFAMILY SSF46785 29 162 8.9E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_a0566 8952dd37d0b68551ce7a3bbdeb6b850c 180 SMART SM00347 48 153 4.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_a0566 8952dd37d0b68551ce7a3bbdeb6b850c 180 Pfam PF12802 MarR family 58 114 1.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1208 408c81b81fe9f8885da70c3963b3171c 255 Pfam PF03591 AzlC protein 23 165 1.8E-33 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease TMO_2315 0afd781b96dcaa7a9fcee54d48fd903d 1097 Pfam PF13550 Putative phage tail protein 578 745 3.3E-34 T 14-10-2018 IPR032876 Tip attachment protein J TMO_a0020 fe5ecd811157e1f987e2a8ba32f71ca2 544 SUPERFAMILY SSF52540 1 361 1.09E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_a0020 fe5ecd811157e1f987e2a8ba32f71ca2 544 Pfam PF13175 AAA ATPase domain 1 333 3.6E-15 T 14-10-2018 TMO_b0207 7a78ce3796c7438d66e9934128f4ce78 252 Gene3D G3DSA:2.40.30.10 23 126 3.2E-8 T 14-10-2018 TMO_b0207 7a78ce3796c7438d66e9934128f4ce78 252 SUPERFAMILY SSF63380 21 128 7.59E-8 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TMO_b0015 2b5f64f2a5d3515464249bbf39c1ecd4 97 Gene3D G3DSA:2.60.200.60 3 96 1.5E-29 T 14-10-2018 TMO_0361 f3a3da42c17af69b6481ad1d206eed03 233 Pfam PF04172 LrgB-like family 17 229 1.1E-68 T 14-10-2018 IPR007300 CidB/LrgB family TMO_c0539 55c7fcb7ff725599598c58f440da1326 398 SUPERFAMILY SSF103473 10 389 2.09E-34 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0539 55c7fcb7ff725599598c58f440da1326 398 Pfam PF07690 Major Facilitator Superfamily 11 313 1.2E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_c0539 55c7fcb7ff725599598c58f440da1326 398 Gene3D G3DSA:1.20.1250.20 4 384 6.3E-25 T 14-10-2018 TMO_0922 e2ba213fa23aaa5c4bb329b9661cec32 675 SUPERFAMILY SSF56112 63 278 1.39E-10 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily TMO_0922 e2ba213fa23aaa5c4bb329b9661cec32 675 Gene3D G3DSA:1.10.510.10 101 296 6.0E-9 T 14-10-2018 TMO_b0407 85182128a56e6d8f38226af74db09c48 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 310 2.1E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2742 79ce6ea133907de49ca5654acccae37e 106 SUPERFAMILY SSF47598 22 98 8.15E-22 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_2742 79ce6ea133907de49ca5654acccae37e 106 Pfam PF08681 Protein of unknown function (DUF1778) 25 101 1.7E-23 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 TMO_2742 79ce6ea133907de49ca5654acccae37e 106 Gene3D G3DSA:1.20.5.780 19 103 1.4E-13 T 14-10-2018 TMO_c0115 7ebaa6d3a33222ebb6547216dd749324 353 Pfam PF06258 Mitochondrial fission ELM1 24 343 1.5E-84 T 14-10-2018 IPR009367 Mitochondrial fission protein ELM1-like TMO_2894 1dbf1d2f91febd93ecfd092f9e8cbf48 298 SUPERFAMILY SSF53474 3 296 4.29E-74 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2894 1dbf1d2f91febd93ecfd092f9e8cbf48 298 Pfam PF00561 alpha/beta hydrolase fold 27 282 5.5E-26 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2894 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 7.9E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2894 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 7.9E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2894 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 7.9E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TMO_2894 1dbf1d2f91febd93ecfd092f9e8cbf48 298 Gene3D G3DSA:3.40.50.1820 4 295 2.5E-89 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2894 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00412 Epoxide hydrolase signature 33 51 1.1E-15 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_2894 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00412 Epoxide hydrolase signature 271 293 1.1E-15 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_2894 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00412 Epoxide hydrolase signature 112 125 1.1E-15 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_2894 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00412 Epoxide hydrolase signature 238 254 1.1E-15 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_2894 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00412 Epoxide hydrolase signature 98 111 1.1E-15 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_1204 0b444dc63417323b6ac203435bc75e38 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 430 2.9E-88 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_1204 0b444dc63417323b6ac203435bc75e38 434 PIRSF PIRSF006066 7 434 4.1E-84 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_1204 0b444dc63417323b6ac203435bc75e38 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 424 1.3E-90 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_d0017 b67c3808e82271dfd79649bc26d0f2bb 227 SUPERFAMILY SSF161098 16 209 1.44E-47 T 14-10-2018 IPR035906 MetI-like superfamily TMO_d0017 b67c3808e82271dfd79649bc26d0f2bb 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 225 5.8E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_d0017 b67c3808e82271dfd79649bc26d0f2bb 227 Gene3D G3DSA:1.10.3720.10 11 225 9.1E-53 T 14-10-2018 IPR035906 MetI-like superfamily TMO_0951 7a0d00aaea1d2959220519bd5daff512 133 Pfam PF04241 Protein of unknown function (DUF423) 19 112 8.8E-18 T 14-10-2018 IPR006696 Protein of unknown function DUF423 TMO_1859 572263ccaaa032ea1c01eba4f69cda7d 331 Gene3D G3DSA:1.10.3470.10 4 330 7.1E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1859 572263ccaaa032ea1c01eba4f69cda7d 331 SUPERFAMILY SSF81345 7 325 1.07E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_1859 572263ccaaa032ea1c01eba4f69cda7d 331 Pfam PF01032 FecCD transport family 16 325 1.3E-74 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TMO_3288 9b05deeb157f3ed24b71a8385010e502 226 Pfam PF04230 Polysaccharide pyruvyl transferase 51 161 3.0E-10 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase TMO_0823 d63d7356f35b2e834cff5a77d28893de 283 Pfam PF04333 MlaA lipoprotein 65 257 1.7E-63 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 TMO_0823 d63d7356f35b2e834cff5a77d28893de 283 PRINTS PR01805 VacJ lipoprotein signature 134 151 3.1E-23 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 TMO_0823 d63d7356f35b2e834cff5a77d28893de 283 PRINTS PR01805 VacJ lipoprotein signature 83 99 3.1E-23 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 TMO_0823 d63d7356f35b2e834cff5a77d28893de 283 PRINTS PR01805 VacJ lipoprotein signature 171 188 3.1E-23 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 TMO_0823 d63d7356f35b2e834cff5a77d28893de 283 PRINTS PR01805 VacJ lipoprotein signature 66 79 3.1E-23 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 TMO_c0033 30af4b546fca113b2cbed34a2e9d8b0d 316 Pfam PF06834 TraU protein 37 304 2.9E-72 T 14-10-2018 IPR009649 TraU TMO_c0033 30af4b546fca113b2cbed34a2e9d8b0d 316 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 30 314 2.8E-133 T 14-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 TMO_0858 b735e156263b55eed72769afcd92ad43 147 Pfam PF12728 Helix-turn-helix domain 78 121 1.3E-6 T 14-10-2018 TMO_a0086 e73b67bb595114e230e8f40b8d2e3e11 289 PIRSF PIRSF029288 1 282 8.8E-70 T 14-10-2018 IPR009211 Predicted virulence protein, SciE type TMO_a0086 e73b67bb595114e230e8f40b8d2e3e11 289 Gene3D G3DSA:1.25.40.10 9 96 2.0E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TMO_a0086 e73b67bb595114e230e8f40b8d2e3e11 289 Pfam PF07024 ImpE protein 148 275 7.6E-38 T 14-10-2018 IPR009211 Predicted virulence protein, SciE type TMO_a0086 e73b67bb595114e230e8f40b8d2e3e11 289 SUPERFAMILY SSF144059 13 276 1.31E-67 T 14-10-2018 TMO_c0075 0a46c94e2b306b88a095b2b22b255bd6 116 Pfam PF02411 MerT mercuric transport protein 1 116 7.2E-60 T 14-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 TMO_0616 b19c121b1be936b8951fcc578835aa3d 406 Gene3D G3DSA:1.20.1250.20 12 397 1.6E-27 T 14-10-2018 TMO_0616 b19c121b1be936b8951fcc578835aa3d 406 SUPERFAMILY SSF103473 11 394 2.22E-33 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_0616 b19c121b1be936b8951fcc578835aa3d 406 Pfam PF07690 Major Facilitator Superfamily 29 342 7.6E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_0580 b9ff9dad9f1c8bf0d8872d5906a31252 226 Pfam PF03741 Integral membrane protein TerC family 15 213 2.5E-42 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 TMO_0580 b9ff9dad9f1c8bf0d8872d5906a31252 226 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 13 213 2.6E-62 T 14-10-2018 IPR022301 Integral membrane protein YjbE TMO_a0526 e8ed1d761e478489fc8fe3105f094c8e 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 353 3.8E-62 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TMO_a0526 e8ed1d761e478489fc8fe3105f094c8e 367 Gene3D G3DSA:3.20.20.70 5 363 3.8E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_a0526 e8ed1d761e478489fc8fe3105f094c8e 367 SUPERFAMILY SSF51395 4 352 2.28E-97 T 14-10-2018 TMO_0368 030334434975db13994ab0eb256cad82 155 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 18 149 4.0E-14 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 TMO_0112 1228139d929e3b61cc948e176d4babc4 167 SUPERFAMILY SSF46785 3 137 6.17E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_0112 1228139d929e3b61cc948e176d4babc4 167 SMART SM00347 25 128 1.7E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_0112 1228139d929e3b61cc948e176d4babc4 167 Gene3D G3DSA:1.10.10.10 1 138 2.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_0112 1228139d929e3b61cc948e176d4babc4 167 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_0112 1228139d929e3b61cc948e176d4babc4 167 Pfam PF01047 MarR family 33 89 4.2E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_1455 63a4dcdf6cc1a5ceb4d6e4f6889013f5 283 Gene3D G3DSA:3.20.20.60 4 273 1.5E-65 T 14-10-2018 TMO_1455 63a4dcdf6cc1a5ceb4d6e4f6889013f5 283 Pfam PF13714 Phosphoenolpyruvate phosphomutase 12 250 2.0E-69 T 14-10-2018 TMO_1455 63a4dcdf6cc1a5ceb4d6e4f6889013f5 283 SUPERFAMILY SSF51621 8 273 4.6E-65 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_1472 490fc263799820049999fca646ae1aba 186 Pfam PF11821 Protein of unknown function (DUF3341) 12 177 9.2E-59 T 14-10-2018 IPR021776 Protein of unknown function DUF3341 TMO_0665 6617bdb9110eaef24ff340978e874d2c 203 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 51 180 2.7E-24 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_0915 764208893420ae54a972b453900921eb 281 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 14 272 1.2E-78 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_0915 764208893420ae54a972b453900921eb 281 SUPERFAMILY SSF53613 11 274 3.12E-70 T 14-10-2018 IPR029056 Ribokinase-like TMO_0915 764208893420ae54a972b453900921eb 281 Gene3D G3DSA:3.40.1190.20 2 280 1.8E-90 T 14-10-2018 IPR029056 Ribokinase-like TMO_0915 764208893420ae54a972b453900921eb 281 Pfam PF08543 Phosphomethylpyrimidine kinase 21 270 1.3E-79 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 TMO_b0097 d46348df230efe82ec0d2984f6631d89 335 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 304 1.9E-51 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_b0097 d46348df230efe82ec0d2984f6631d89 335 Gene3D G3DSA:3.40.190.170 38 331 1.4E-63 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_1495 86e2e00e4d0741ca209cecbb2674239f 157 Gene3D G3DSA:3.10.450.50 20 151 3.0E-31 T 14-10-2018 TMO_1495 86e2e00e4d0741ca209cecbb2674239f 157 Pfam PF07366 SnoaL-like polyketide cyclase 33 146 1.5E-23 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 TMO_1495 86e2e00e4d0741ca209cecbb2674239f 157 SUPERFAMILY SSF54427 25 150 2.14E-31 T 14-10-2018 IPR032710 NTF2-like domain superfamily TMO_a0382 26f0b1412bf1b4ae98098abe379f9a3e 422 SUPERFAMILY SSF53474 31 402 2.38E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold TMO_2766 d2142a1398e476cae5318cc4459855b2 298 SUPERFAMILY SSF103481 45 135 3.92E-6 T 14-10-2018 TMO_2766 d2142a1398e476cae5318cc4459855b2 298 SUPERFAMILY SSF103481 184 281 7.85E-10 T 14-10-2018 TMO_2766 d2142a1398e476cae5318cc4459855b2 298 Pfam PF00892 EamA-like transporter family 147 277 1.6E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_a0144 e6e21212b288557c8354396852ccd812 91 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 38 9.6E-7 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 TMO_a0144 e6e21212b288557c8354396852ccd812 91 SUPERFAMILY SSF47598 3 44 3.81E-6 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TMO_1187 09c6da0f69aaef95d65fb2de532481cb 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 3.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_1187 09c6da0f69aaef95d65fb2de532481cb 219 SUPERFAMILY SSF48498 83 203 3.91E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TMO_1187 09c6da0f69aaef95d65fb2de532481cb 219 Gene3D G3DSA:1.10.357.10 1 211 9.6E-41 T 14-10-2018 TMO_1187 09c6da0f69aaef95d65fb2de532481cb 219 SUPERFAMILY SSF46689 3 75 3.28E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TMO_a0456 8b2577f40cbc180fc9b0667e11373d5a 203 Pfam PF00912 Transglycosylase 8 143 1.6E-18 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_a0456 8b2577f40cbc180fc9b0667e11373d5a 203 SUPERFAMILY SSF53955 7 145 3.37E-24 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily TMO_a0456 8b2577f40cbc180fc9b0667e11373d5a 203 Gene3D G3DSA:1.10.3810.10 4 151 1.3E-21 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TMO_2853 97f700d83be9f0ae25013e4675b9a70d 293 SUPERFAMILY SSF51621 4 265 3.72E-67 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TMO_2853 97f700d83be9f0ae25013e4675b9a70d 293 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 225 3.4E-47 T 14-10-2018 TMO_2853 97f700d83be9f0ae25013e4675b9a70d 293 Gene3D G3DSA:3.20.20.60 6 290 5.9E-77 T 14-10-2018 TMO_1661 bd067491359432d9d6186d14d31cecf1 648 Gene3D G3DSA:1.20.58.220 427 633 8.0E-12 T 14-10-2018 IPR038078 PhoU-like domain superfamily TMO_c0934 9983f25a01240c34c196089010f3768e 192 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.2E-20 T 14-10-2018 IPR001727 Gdt1 family TMO_c0934 9983f25a01240c34c196089010f3768e 192 Pfam PF01169 Uncharacterized protein family UPF0016 105 179 5.5E-19 T 14-10-2018 IPR001727 Gdt1 family TMO_c0856 56e5071b0f1d5f8a98407fb724fa0011 389 SUPERFAMILY SSF51197 12 287 1.36E-27 T 14-10-2018 TMO_c0856 56e5071b0f1d5f8a98407fb724fa0011 389 Pfam PF08007 Cupin superfamily protein 97 290 5.7E-24 T 14-10-2018 IPR003347 JmjC domain TMO_c0856 56e5071b0f1d5f8a98407fb724fa0011 389 Gene3D G3DSA:2.60.120.650 3 221 7.6E-42 T 14-10-2018 TMO_a0002 9090cae9d298c5417175fb3a9a291d6d 189 Gene3D G3DSA:3.30.40.60 35 134 2.7E-11 T 14-10-2018 TMO_0497 51250405d773dbc748946f1f5b91f6b0 370 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 23 351 7.5E-112 T 14-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC TMO_0497 51250405d773dbc748946f1f5b91f6b0 370 Pfam PF02653 Branched-chain amino acid transport system / permease component 34 341 3.4E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0175 9ce66e353d708a835f66077f71b0207f 959 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 481 493 1.2E-7 T 14-10-2018 TMO_c0175 9ce66e353d708a835f66077f71b0207f 959 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 372 386 1.2E-7 T 14-10-2018 TMO_c0175 9ce66e353d708a835f66077f71b0207f 959 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 301 317 1.2E-7 T 14-10-2018 TMO_c0175 9ce66e353d708a835f66077f71b0207f 959 SUPERFAMILY SSF53335 163 560 4.01E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_c0175 9ce66e353d708a835f66077f71b0207f 959 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 484 490 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TMO_b0290 5f782eb0eaa956af296d7b640f2c3b1b 200 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 155 3.6E-20 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_c0353 79a7b6a2d071c152e57858bdb9f4b5bf 537 Pfam PF02538 Hydantoinase B/oxoprolinase 10 529 4.9E-171 T 14-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TMO_0872 37e8b6ddde5acd6aefe0c55631fa5f05 146 Pfam PF00011 Hsp20/alpha crystallin family 44 140 3.9E-18 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain TMO_0872 37e8b6ddde5acd6aefe0c55631fa5f05 146 SUPERFAMILY SSF49764 43 140 2.83E-20 T 14-10-2018 IPR008978 HSP20-like chaperone TMO_0872 37e8b6ddde5acd6aefe0c55631fa5f05 146 Gene3D G3DSA:2.60.40.790 38 141 1.1E-23 T 14-10-2018 IPR008978 HSP20-like chaperone TMO_1231 0f46382d283d5ac8a224e4c513b6c827 393 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 274 347 6.8E-21 T 14-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain TMO_0366 a0413090282f38b0f359f51dc675d067 382 Pfam PF14907 Uncharacterised nucleotidyltransferase 39 284 9.9E-38 T 14-10-2018 IPR039498 Uncharacterised nucleotidyltransferase TMO_c0044 f5c34d7a06e0d8cf50de69b80a023374 77 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 77 7.7E-32 T 14-10-2018 IPR021676 Protein of unknown function DUF3262 TMO_c0044 f5c34d7a06e0d8cf50de69b80a023374 77 Pfam PF11660 Protein of unknown function (DUF3262) 1 76 5.8E-26 T 14-10-2018 IPR021676 Protein of unknown function DUF3262 TMO_0284 776a2fd90d0cb12eeda9c080692e69af 380 Gene3D G3DSA:3.40.190.170 41 364 3.3E-58 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_0284 776a2fd90d0cb12eeda9c080692e69af 380 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 55 338 9.0E-26 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_0504 79284c63916589b6cd91e7c97c105b4d 205 Pfam PF06226 Protein of unknown function (DUF1007) 17 166 3.0E-42 T 14-10-2018 IPR010412 Protein of unknown function DUF1007 TMO_2725 fc7900b015b6431b0d74edca2e39e87c 307 SUPERFAMILY SSF161098 94 291 2.75E-21 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2725 fc7900b015b6431b0d74edca2e39e87c 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 305 4.5E-45 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2725 fc7900b015b6431b0d74edca2e39e87c 307 Gene3D G3DSA:1.10.3720.10 86 298 3.2E-28 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0291 be6eaabf3db94e44c075da392c7f552f 345 Gene3D G3DSA:3.40.190.170 31 345 2.8E-73 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_b0291 be6eaabf3db94e44c075da392c7f552f 345 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 37 318 2.3E-42 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_3548 84929ad7af32043edc70b59bf8e31ef6 136 SUPERFAMILY SSF46785 10 132 1.07E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TMO_3548 84929ad7af32043edc70b59bf8e31ef6 136 Gene3D G3DSA:1.10.10.10 9 90 2.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TMO_3548 84929ad7af32043edc70b59bf8e31ef6 136 Pfam PF01475 Ferric uptake regulator family 17 112 2.5E-22 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TMO_c0770 b39d9c35dc39d292f2469ff451f76283 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 276 1.8E-32 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_3198 a0a6d630cea561db279b2e28764b5297 217 SUPERFAMILY SSF52266 24 206 2.14E-47 T 14-10-2018 TMO_3198 a0a6d630cea561db279b2e28764b5297 217 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 30 191 1.6E-25 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain TMO_3198 a0a6d630cea561db279b2e28764b5297 217 Gene3D G3DSA:3.40.50.1110 27 211 5.3E-65 T 14-10-2018 IPR036514 SGNH hydrolase superfamily TMO_a0549 fc9594b7c5b3a83c0324b8bed8abb2df 374 Pfam PF04724 Glycosyltransferase family 17 2 133 3.4E-16 T 14-10-2018 IPR006813 Glycosyl transferase, family 17 GO:0003830|GO:0006487|GO:0016020 KEGG: 00510+2.4.1.144|MetaCyc: PWY-7426|Reactome: R-HSA-975574 TMO_0277 e69591deac36661c8ffabedab3f0a892 488 Pfam PF13440 Polysaccharide biosynthesis protein 36 325 3.7E-60 T 14-10-2018 TMO_1390 5729d4a11ed85e3b1f232b2252d71964 274 SUPERFAMILY SSF161098 10 265 5.42E-48 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1390 5729d4a11ed85e3b1f232b2252d71964 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 261 1.9E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1390 5729d4a11ed85e3b1f232b2252d71964 274 Gene3D G3DSA:1.10.3720.10 12 269 1.7E-43 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0136 90cd0331652aad54f1fcac924991a2b9 133 Pfam PF13801 Heavy-metal resistance 17 123 9.0E-13 T 14-10-2018 IPR025961 Heavy-metal resistance protein TMO_a0568 d1a28e85871004f62c74824a173bdf1d 382 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 50 301 4.3E-12 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_a0568 d1a28e85871004f62c74824a173bdf1d 382 Gene3D G3DSA:3.40.190.170 38 352 2.6E-51 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_b0507 598864263544074795ad2aad997875b5 116 SUPERFAMILY SSF50891 1 104 1.63E-23 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily TMO_b0507 598864263544074795ad2aad997875b5 116 Gene3D G3DSA:2.40.100.20 1 107 3.9E-15 T 14-10-2018 TMO_c0092 a12e0943b8d5b0c3648dc52c6a6dd446 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 4.6E-63 T 14-10-2018 IPR021364 Protein of unknown function DUF2857 TMO_2660 c5058a6a1a6b190ec1f35304ed7d003d 416 SUPERFAMILY SSF53335 144 410 2.13E-69 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_2660 c5058a6a1a6b190ec1f35304ed7d003d 416 Pfam PF02353 Mycolic acid cyclopropane synthetase 136 410 1.6E-75 T 14-10-2018 TMO_2660 c5058a6a1a6b190ec1f35304ed7d003d 416 PIRSF PIRSF003085 29 416 1.2E-118 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 TMO_2660 c5058a6a1a6b190ec1f35304ed7d003d 416 Gene3D G3DSA:3.40.50.150 142 416 2.2E-89 T 14-10-2018 TMO_c0219 bc76bb6fb3f50d9b9704d5dbd14cd149 188 Pfam PF12698 ABC-2 family transporter protein 30 144 2.5E-13 T 14-10-2018 TMO_0147 4de1e4000fc3e0047cead25ffc789c4a 421 PIRSF PIRSF006066 1 421 1.1E-147 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_0147 4de1e4000fc3e0047cead25ffc789c4a 421 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 2 408 9.3E-115 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_0147 4de1e4000fc3e0047cead25ffc789c4a 421 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 13 412 2.2E-126 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TMO_c0040 f0d0f5fe054878cbdcfa2af7c70a6b55 303 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 13 274 1.2E-112 T 14-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 TMO_c0040 f0d0f5fe054878cbdcfa2af7c70a6b55 303 Pfam PF11920 Protein of unknown function (DUF3438) 9 283 4.9E-126 T 14-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 TMO_c0055 f890f9565ac5a5d83afedb9f05b88906 105 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 1 105 1.8E-43 T 14-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 TMO_c0055 f890f9565ac5a5d83afedb9f05b88906 105 Pfam PF11072 Protein of unknown function (DUF2859) 1 103 1.2E-43 T 14-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 TMO_2021 24600e8a51e4c63a50e894135d8cbbf4 402 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 297 377 3.1E-9 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 TMO_2021 24600e8a51e4c63a50e894135d8cbbf4 402 SUPERFAMILY SSF53756 13 383 1.73E-23 T 14-10-2018 TMO_2021 24600e8a51e4c63a50e894135d8cbbf4 402 Gene3D G3DSA:3.40.50.2000 220 389 1.9E-18 T 14-10-2018 TMO_c0318 d35b942a231389a0d80ba278f0fd40b0 82 Pfam PF07704 Rv0623-like transcription factor 1 81 9.8E-25 T 14-10-2018 IPR011660 Antitoxin VapB-like TMO_2939 f9f065197a3329aed5947436d0dff545 124 SUPERFAMILY SSF54909 1 115 5.63E-32 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel TMO_2939 f9f065197a3329aed5947436d0dff545 124 Gene3D G3DSA:3.30.70.1060 1 116 2.0E-37 T 14-10-2018 TMO_2939 f9f065197a3329aed5947436d0dff545 124 Pfam PF03795 YCII-related domain 1 115 2.9E-20 T 14-10-2018 IPR005545 YCII-related TMO_b0099 57a4eb4b61a098fd7f19be9ae03fbc8a 95 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 7 94 2.9E-37 T 14-10-2018 IPR018678 Protein of unknown function DUF2160, transmembrane TMO_b0408 0c88deb9ba1bdc30559d0bccfa5b6b2e 288 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 272 4.0E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_1645 0cbe59b768af87569ea57371c39db08f 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 302 1.6E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_3359 f004148132cb05a23a92e96537ab93ea 152 Pfam PF10947 Protein of unknown function (DUF2628) 17 95 5.4E-12 T 14-10-2018 IPR024399 Protein of unknown function DUF2628 TMO_a0330 2d5003a09c7a0ce34133e80489b99d52 221 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 3 212 1.7E-33 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related TMO_b0354 6267b278a5e77d8c45fc8dac2972b923 258 SMART SM01007 38 216 4.0E-44 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_b0354 6267b278a5e77d8c45fc8dac2972b923 258 SUPERFAMILY SSF53639 36 240 1.18E-53 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_b0354 6267b278a5e77d8c45fc8dac2972b923 258 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 39 216 3.7E-37 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal TMO_b0354 6267b278a5e77d8c45fc8dac2972b923 258 Gene3D G3DSA:3.40.225.10 24 250 8.8E-51 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TMO_c0682 a6fead22eb95c522b3d0b3557f267cd5 524 SUPERFAMILY SSF103473 8 517 4.84E-21 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_c0682 a6fead22eb95c522b3d0b3557f267cd5 524 Pfam PF07690 Major Facilitator Superfamily 26 416 8.4E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_d0016 90c3b2d63b128b26f2254b7ef4a949bb 2534 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 175 303 7.1E-12 T 14-10-2018 IPR018003 Insecticidal toxin complex/plasmid virulence protein TMO_1117 e8b16c78db136c760a74ed4363ac1308 152 Pfam PF04347 Flagellar biosynthesis protein, FliO 27 99 5.4E-9 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 TMO_c0007 1efd9c4ab1728e9e743a0ce9593980b7 308 Pfam PF05425 Copper resistance protein D 195 300 2.8E-24 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 TMO_a0031 673c1e664bce43f051882502bd71ec45 232 Pfam PF03692 Putative zinc- or iron-chelating domain 81 168 3.2E-8 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein TMO_c0226 55fe3422d29667b95dfc9b20a6bdba9c 421 SUPERFAMILY SSF102114 38 270 7.85E-13 T 14-10-2018 TMO_c0226 55fe3422d29667b95dfc9b20a6bdba9c 421 Gene3D G3DSA:3.20.20.70 33 283 2.3E-11 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_2043 a7d4bd096c223779854d9a9350aef416 436 Pfam PF08874 Domain of unknown function (DUF1835) 106 209 7.0E-5 T 14-10-2018 IPR014973 Protein of unknown function DUF1835 TMO_d0031 ff01772b8ec72d1faca06e577882c4ae 273 Gene3D G3DSA:1.10.3720.10 6 271 1.8E-43 T 14-10-2018 IPR035906 MetI-like superfamily TMO_d0031 ff01772b8ec72d1faca06e577882c4ae 273 SUPERFAMILY SSF161098 6 264 3.74E-44 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0498 288b72984b5277c124e80c93b66b046d 238 SMART SM00873 69 225 2.0E-7 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TMO_b0498 288b72984b5277c124e80c93b66b046d 238 Pfam PF03483 B3/4 domain 71 200 6.7E-17 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TMO_b0498 288b72984b5277c124e80c93b66b046d 238 SUPERFAMILY SSF56037 66 202 2.43E-23 T 14-10-2018 TMO_b0300 567586a59e559ea5aedad2b0e309d9b0 1165 SUPERFAMILY SSF50370 853 950 6.93E-5 T 14-10-2018 IPR035992 Ricin B-like lectins TMO_b0134 b2ebcf217e00a767ce2cf811769e6938 155 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 94 8.1E-29 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family TMO_a0448 868113a9f8d07a8a82e12c4f327abe19 131 SUPERFAMILY SSF56209 22 113 4.84E-9 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_b0253 d1041571ed6e42410c13842e5e2f5598 378 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 46 293 4.0E-12 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TMO_b0253 d1041571ed6e42410c13842e5e2f5598 378 Gene3D G3DSA:3.40.190.170 30 344 2.9E-51 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TMO_2455 5da0584bd5374048d9655049f978f056 343 PIRSF PIRSF026166 1 335 4.6E-127 T 14-10-2018 IPR016833 Putative sodium bile acid cotransporter TMO_2455 5da0584bd5374048d9655049f978f056 343 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 2.0E-99 T 14-10-2018 IPR016833 Putative sodium bile acid cotransporter TMO_2455 5da0584bd5374048d9655049f978f056 343 Gene3D G3DSA:1.20.1530.20 1 320 1.5E-34 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily TMO_1220 59b2e785e5aad28bea5e0cabd7eb8643 369 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 100 360 1.8E-68 T 14-10-2018 IPR019285 Protein of unknown function DUF2336 TMO_1171 9859c04786711cde5328f8adb61995b8 112 Pfam PF02625 XdhC and CoxI family 20 85 1.2E-24 T 14-10-2018 IPR003777 XdhC- CoxI TMO_c0265 2024f5d35a43d39100396784b07d63ab 259 Pfam PF04982 HPP family 69 189 2.6E-35 T 14-10-2018 IPR007065 HPP TMO_a0091 ae44e496bc89fd9bcd712a19ffa656cb 149 ProDom PD082852 PRECURSOR SIGNAL PROTEASE SIMILAR SERINE KINASE HYDROLASE ENDOPEPTIDASE GLU-SPECIFIC V8-LIKE 54 130 8.0E-10 T 14-10-2018 IPR020336 Uncharacterised protein family Y2126 TMO_2856 1aefbeb3e7f4620c685a4ca2480cc2cd 63 Pfam PF13711 Domain of unknown function (DUF4160) 1 58 4.3E-11 T 14-10-2018 IPR025427 Protein of unknown function DUF4160 TMO_0254 d1635fd9bff249ef01eef15c3fa65c5e 142 PIRSF PIRSF016789 26 142 3.5E-31 T 14-10-2018 IPR007401 Protein of unknown function DUF454 TMO_0254 d1635fd9bff249ef01eef15c3fa65c5e 142 Pfam PF04304 Protein of unknown function (DUF454) 29 140 3.1E-34 T 14-10-2018 IPR007401 Protein of unknown function DUF454 TMO_b0528 91ae8cdb587e779f32b472ccdbeb84c3 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 160 7.4E-25 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_2093 38f0c2cc1d65a4a1a0200768365ec5fd 237 PIRSF PIRSF033328 5 236 6.0E-50 T 14-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_2093 38f0c2cc1d65a4a1a0200768365ec5fd 237 Pfam PF06299 Protein of unknown function (DUF1045) 66 227 7.7E-51 T 14-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TMO_2477 c0df463642ff91022383278377a168bf 202 Pfam PF13244 Domain of unknown function (DUF4040) 21 85 8.2E-17 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 TMO_2730 0cc305352e4af0f3ab818111fe359338 282 SUPERFAMILY SSF161098 80 266 9.81E-30 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2730 0cc305352e4af0f3ab818111fe359338 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 274 4.7E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_2730 0cc305352e4af0f3ab818111fe359338 282 Gene3D G3DSA:1.10.3720.10 82 276 2.6E-20 T 14-10-2018 IPR035906 MetI-like superfamily TMO_2371 0f7fd104c10461dfcd40ddb5c4781ef6 2215 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 451 524 1.1E-20 T 14-10-2018 IPR013491 Caudovirus, tape measure, N-terminal TMO_b0066 432afca354a322a365922c9bf5f6d8b4 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 424 1.3E-65 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TMO_b0066 432afca354a322a365922c9bf5f6d8b4 455 Pfam PF01554 MatE 252 412 8.4E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TMO_b0066 432afca354a322a365922c9bf5f6d8b4 455 Pfam PF01554 MatE 23 182 1.8E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TMO_b0066 432afca354a322a365922c9bf5f6d8b4 455 PIRSF PIRSF006603 5 453 1.9E-92 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TMO_1667 7b6c1df5ab42047cec1bcf1f8892650d 118 Pfam PF06993 Protein of unknown function (DUF1304) 8 115 2.2E-43 T 14-10-2018 IPR009732 Protein of unknown function DUF1304 TMO_a0514 7fd41e858197f0ffb8e28b41eab3833a 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 31 162 3.3E-15 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_1481 99022189a1353ae4b19289f04d613fa7 90 TIGRFAM TIGR02229 caa3_sub_IV: caa(3)-type oxidase, subunit IV 5 87 1.3E-20 T 14-10-2018 IPR011743 Caa(3)-type oxidase, subunit IV TMO_1481 99022189a1353ae4b19289f04d613fa7 90 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 9 77 3.5E-10 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 TMO_c0039 25cfc2b1d0d13b2aa625dbe811d5656e 472 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 2 462 4.3E-187 T 14-10-2018 IPR021207 Integrating conjugative element protein, PFL4705 TMO_2557 64d96fe511eff02eeb49ab261c05ac09 198 Pfam PF07310 PAS domain 23 147 3.0E-11 T 14-10-2018 IPR009922 Protein of unknown function DUF1457 TMO_3283 f4dc1c137ffb65e9da06596fe976d47c 81 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 3.4E-28 T 14-10-2018 IPR010696 Protein of unknown function DUF1272 TMO_0916 3334aaf272be2917fea3a5dc6157c082 262 PIRSF PIRSF016184 1 260 1.8E-20 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_0916 3334aaf272be2917fea3a5dc6157c082 262 Gene3D G3DSA:3.10.310.10 8 257 3.0E-46 T 14-10-2018 TMO_0916 3334aaf272be2917fea3a5dc6157c082 262 Gene3D G3DSA:3.10.310.10 117 250 3.0E-46 T 14-10-2018 TMO_0916 3334aaf272be2917fea3a5dc6157c082 262 SUPERFAMILY SSF54506 1 262 1.05E-36 T 14-10-2018 TMO_0916 3334aaf272be2917fea3a5dc6157c082 262 Pfam PF02567 Phenazine biosynthesis-like protein 8 222 1.6E-17 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 TMO_c0041 6d6bf7c9e8c12039f0e3ac849052462e 230 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 207 5.9E-96 T 14-10-2018 IPR021548 Protein of unknown function DUF2895 TMO_c0041 6d6bf7c9e8c12039f0e3ac849052462e 230 Pfam PF11444 Protein of unknown function (DUF2895) 6 206 1.8E-90 T 14-10-2018 IPR021548 Protein of unknown function DUF2895 TMO_b0458 f69e558c00600b3def035dcaadcbbfd4 162 Pfam PF10649 Protein of unknown function (DUF2478) 12 144 1.4E-47 T 14-10-2018 IPR018912 Protein of unknown function DUF2478 TMO_0099 79c21a5bc7d3c95d6ac7e409cdb4cfc1 59 Pfam PF07896 Protein of unknown function (DUF1674) 23 59 7.6E-15 T 14-10-2018 IPR012875 Protein of unknown function DUF1674 TMO_c0047 5a752d6d7fbb014c1f712f8ae1e7dbd5 167 Pfam PF13470 PIN domain 6 90 3.9E-9 T 14-10-2018 IPR002716 PIN domain TMO_c0261 a5c5f1f4b8665e1144e8fefc3959acfb 166 Pfam PF14280 Domain of unknown function (DUF4365) 13 159 3.6E-24 T 14-10-2018 IPR025375 Domain of unknown function DUF4365 TMO_a0487 7db0a69fadbad197c208a18334397742 275 Pfam PF05711 Macrocin-O-methyltransferase (TylF) 5 274 1.1E-96 T 14-10-2018 IPR008884 Macrocin-O-methyltransferase TMO_a0487 7db0a69fadbad197c208a18334397742 275 SUPERFAMILY SSF53335 88 239 1.83E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_a0487 7db0a69fadbad197c208a18334397742 275 Gene3D G3DSA:3.40.50.150 4 275 3.5E-67 T 14-10-2018 TMO_1009 cd656398003e12a7c2b5b4f7dacf4944 91 Pfam PF09851 Short C-terminal domain 62 89 2.7E-7 T 14-10-2018 IPR018649 SHOCT domain TMO_3048 6497451dc6a2402c558116eaf0312801 390 Gene3D G3DSA:3.90.550.10 23 261 2.0E-19 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_3048 6497451dc6a2402c558116eaf0312801 390 SUPERFAMILY SSF53448 27 267 3.28E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TMO_3048 6497451dc6a2402c558116eaf0312801 390 Pfam PF00535 Glycosyl transferase family 2 28 203 3.9E-11 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TMO_0625 ac5bfae1bcc242f16ea2ee20f9585ce6 741 Pfam PF11739 Dicarboxylate transport 525 711 2.7E-35 T 14-10-2018 IPR021730 Dicarboxylate transport TMO_b0224 7a2c23d0520d489d2d76a3e180d8a06e 256 Pfam PF06629 MltA-interacting protein MipA 37 256 5.5E-43 T 14-10-2018 IPR010583 MltA-interacting MipA TMO_3308 429c12e1b7744a34516c1a5179fbccf8 114 Pfam PF05154 TM2 domain 31 76 4.3E-13 T 14-10-2018 IPR007829 TM2 domain TMO_2136 eb0086aff611daa5c5ae6b48e206836f 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 303 5.5E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_a0431 8c4d56fcae031eecc770b4898962c152 63 Pfam PF11450 Protein of unknwon function (DUF3008) 3 58 1.1E-30 T 14-10-2018 IPR021553 Protein of unknwon function DUF3008 TMO_3372 fa8236eeea3c1664c76dad84aae2ce67 285 TIGRFAM TIGR04052 AZL_007920_fam: AZL_007920/MXAN_0976 family protein 63 272 7.0E-67 T 14-10-2018 IPR023977 Conserved hypotheical protein CHP04052 TMO_1803 b266e75684e71312df3c1ccf1f4a2118 156 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 155 7.9E-16 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_b0152 4e57a9d6cfaa0ef4d0e8467777744394 261 SUPERFAMILY SSF161098 62 247 1.57E-28 T 14-10-2018 IPR035906 MetI-like superfamily TMO_b0152 4e57a9d6cfaa0ef4d0e8467777744394 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 255 5.1E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_b0152 4e57a9d6cfaa0ef4d0e8467777744394 261 Gene3D G3DSA:1.10.3720.10 61 255 5.4E-21 T 14-10-2018 IPR035906 MetI-like superfamily TMO_3093 35d6a3eaf9b304b0eac59adcce4ad660 347 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 305 2.2E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_0402 02d4570208de86620759cd84410d2182 139 Pfam PF08448 PAS fold 51 136 7.4E-7 T 14-10-2018 IPR013656 PAS fold-4 TMO_2808 65f950c248c1a32797c7fd9490520007 82 Pfam PF06170 Protein of unknown function (DUF983) 3 65 7.8E-22 T 14-10-2018 IPR009325 Protein of unknown function DUF983 TMO_0954 cd53c7ae5597904204c3d3ac6448e60d 392 Pfam PF05762 VWA domain containing CoxE-like protein 187 272 2.0E-7 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like TMO_0121 92085a63c590db000d4d88b3fa3284a3 65 Pfam PF04588 Hypoxia induced protein conserved region 8 58 1.7E-12 T 14-10-2018 IPR007667 Hypoxia induced protein, domain TMO_c0257 5b9984d7334bd3a56cc3b66bd49df662 185 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 35 165 3.3E-23 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_c0390 495373d3863993e54d131f7cf5cb5703 146 Pfam PF13664 Domain of unknown function (DUF4149) 19 108 1.3E-10 T 14-10-2018 IPR025423 Domain of unknown function DUF4149 TMO_3172 82a31472ebdc2de181c7a371c727e5e3 462 SUPERFAMILY SSF56059 36 427 1.34E-18 T 14-10-2018 TMO_c0565 48c136b2a53d17e72e6ce7ffded1df16 710 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 43 702 2.1E-218 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ TMO_c0565 48c136b2a53d17e72e6ce7ffded1df16 710 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 416 620 1.2E-25 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_c0565 48c136b2a53d17e72e6ce7ffded1df16 710 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 139 404 1.8E-61 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_3150 e37a6f9bbbcd4f000f963fe55f1c60f9 230 Pfam PF04366 Las17-binding protein actin regulator 109 228 8.6E-31 T 14-10-2018 IPR007461 Ysc84 actin-binding domain TMO_2042 ae420c2f4122af1d6550caef78b1a072 124 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 14 118 6.9E-6 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD TMO_0341 19cac5f2d760eca878847cdc2427d6d2 211 Pfam PF11136 Protein of unknown function (DUF2889) 13 136 8.3E-46 T 14-10-2018 IPR021312 Protein of unknown function DUF2889 TMO_2135 35abd58eba7059e9526e5462915b52d0 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 283 6.1E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_b0378 397bfb1abbac11865c392a4f3518e150 446 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 7 361 3.0E-129 T 14-10-2018 IPR010839 Acyclic terpene utilisation TMO_2392 c3e48ae9943e2b353418be7823f75229 197 Pfam PF06252 Protein of unknown function (DUF1018) 20 135 4.0E-29 T 14-10-2018 IPR009363 Bacteriophage Mu, Gp16 TMO_2855 47cd17ef1a0686e4a8544f3b9add167b 76 SUPERFAMILY SSF47413 12 63 1.49E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TMO_2855 47cd17ef1a0686e4a8544f3b9add167b 76 Gene3D G3DSA:1.10.260.40 11 73 1.2E-13 T 14-10-2018 TMO_a0538 15e0a69b3b7750021d0b26dc3819c419 176 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 160 6.9E-21 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_3158 6c92230fe776a19225dbf534dc6925e5 335 Pfam PF06089 L-asparaginase II 8 330 3.4E-114 T 14-10-2018 IPR010349 L-asparaginase II TMO_a0496 1b2013b9d706cca11de3027e1931e974 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 272 2.0E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_d0013 bc58c6d6c72b5c06a89a23ad17613e75 153 Pfam PF13673 Acetyltransferase (GNAT) domain 32 138 9.0E-17 T 14-10-2018 IPR000182 GNAT domain TMO_d0013 bc58c6d6c72b5c06a89a23ad17613e75 153 SUPERFAMILY SSF55729 6 151 3.31E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_d0013 bc58c6d6c72b5c06a89a23ad17613e75 153 Gene3D G3DSA:3.40.630.30 1 153 7.8E-31 T 14-10-2018 TMO_a0401 6d063b38cdcb91516a6f7e643f8befc0 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 27 296 1.3E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_a0175 221b10aa24e99e3e8eb42b51c4c0789d 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 158 1.2E-17 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_2380 d78ae96f88b1ae0377524f7102810f64 171 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 11 161 1.7E-11 T 14-10-2018 IPR006522 Phage virion morphogensis protein TMO_2380 d78ae96f88b1ae0377524f7102810f64 171 Pfam PF05069 Phage virion morphogenesis family 10 162 7.8E-26 T 14-10-2018 IPR006522 Phage virion morphogensis protein TMO_c0157 baba0bf45578293eeaf6e556d8d65486 87 SUPERFAMILY SSF103473 2 81 3.53E-6 T 14-10-2018 IPR036259 MFS transporter superfamily TMO_1598 af3dfc506c2a41bd8abcf02633adadc0 207 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 190 3.0E-8 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TMO_1660 28fd9c3dc9a120622aca5f3c500c245b 130 SUPERFAMILY SSF159894 14 110 5.23E-27 T 14-10-2018 TMO_1660 28fd9c3dc9a120622aca5f3c500c245b 130 Gene3D G3DSA:3.30.1460.30 8 110 5.2E-30 T 14-10-2018 TMO_1660 28fd9c3dc9a120622aca5f3c500c245b 130 Pfam PF04993 TfoX N-terminal domain 17 109 3.8E-28 T 14-10-2018 IPR007076 TfoX, N-terminal TMO_2426 f1feb03d3a7985edcb6ca73479260ef2 258 Pfam PF01925 Sulfite exporter TauE/SafE 15 244 1.1E-28 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_2727 f3f0a3b70a21335505d3fe90a5559abc 585 Gene3D G3DSA:3.40.630.10 310 579 2.1E-29 T 14-10-2018 TMO_2727 f3f0a3b70a21335505d3fe90a5559abc 585 SUPERFAMILY SSF53187 324 456 1.06E-17 T 14-10-2018 TMO_2284 e64fdf50fbcef3b22ac336994c64b81c 147 Pfam PF05751 FixH 1 137 2.8E-19 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH TMO_b0006 4d35d46d75e6b477ae571263e631cec2 101 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 6 85 5.4E-11 T 14-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative TMO_2064 89a8da754df3c5f4316c5255cea44405 367 SUPERFAMILY SSF56281 27 332 3.68E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_2064 89a8da754df3c5f4316c5255cea44405 367 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 24 349 2.5E-132 T 14-10-2018 IPR026360 Putative exonuclease, DNA ligase-associated TMO_2064 89a8da754df3c5f4316c5255cea44405 367 Gene3D G3DSA:3.60.15.10 28 187 1.3E-19 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_1273 47f3ac7e40953147a69be9e251b8a1d7 202 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 40 166 4.9E-21 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_0840 f8559405a15b22b10bacd1ba5ace0c43 325 Pfam PF03060 Nitronate monooxygenase 3 309 4.3E-60 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_0840 f8559405a15b22b10bacd1ba5ace0c43 325 SUPERFAMILY SSF51412 1 315 7.2E-68 T 14-10-2018 TMO_0840 f8559405a15b22b10bacd1ba5ace0c43 325 Gene3D G3DSA:3.20.20.70 1 325 1.2E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_c0119 f63555963a916ec3c31aa9b4c1f83290 136 Pfam PF09345 Domain of unknown function (DUF1987) 12 129 5.0E-43 T 14-10-2018 IPR018530 Domain of unknown function DUF1987 TMO_b0473 538540725281b540b61efe2f053a6c1c 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 19 294 1.4E-47 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_b0473 538540725281b540b61efe2f053a6c1c 309 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 16 307 1.1E-120 T 14-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type TMO_3076 b4c7e91e4816b487e57e9b8fb6c15631 215 Pfam PF01810 LysE type translocator 15 207 1.2E-15 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_b0049 00538aec2ed4a1ead66e4d3ae3696648 71 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 2.1E-16 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 TMO_0712 3e23f4c1d8345def5a29177f3db49176 854 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 48 439 1.0E-84 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH TMO_0712 3e23f4c1d8345def5a29177f3db49176 854 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 455 834 2.0E-120 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH TMO_1090 cf5010d0197fe9bc78a436f94f4b7b5b 127 Pfam PF10135 Rod binding protein 78 118 5.5E-7 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal TMO_2208 049449665c4d60df9339f9b3bde55d42 50 Gene3D G3DSA:1.10.260.40 1 41 1.9E-5 T 14-10-2018 TMO_1830 5026e886dbd7f85727e8c2bcbe3dc6b5 312 SUPERFAMILY SSF48239 11 307 3.93E-8 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TMO_a0418 a0ebbd496039c5e0f4aff96c43816965 286 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 275 1.7E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_1317 f415a53280cff995089a81fee45683d8 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 284 1.8E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TMO_1317 f415a53280cff995089a81fee45683d8 291 SUPERFAMILY SSF161098 31 291 4.97E-54 T 14-10-2018 IPR035906 MetI-like superfamily TMO_1317 f415a53280cff995089a81fee45683d8 291 Gene3D G3DSA:1.10.3720.10 30 283 2.0E-51 T 14-10-2018 IPR035906 MetI-like superfamily TMO_c0071 bf3c897e65d537d601696f80b4f580e0 86 Pfam PF11284 Protein of unknown function (DUF3085) 1 80 4.8E-25 T 14-10-2018 IPR021436 Protein of unknown function DUF3085 TMO_1471 acd19879bc5434e0bae2bb7be43bd7a3 449 Pfam PF03916 Polysulphide reductase, NrfD 63 386 3.5E-29 T 14-10-2018 IPR005614 NrfD family TMO_2041 128326d6ad37b99378cf35b91f96536a 229 Pfam PF03591 AzlC protein 9 152 1.3E-22 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease TMO_b0602 0757996b2afa32806d40198921976ee7 114 SUPERFAMILY SSF51182 2 105 7.26E-17 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily TMO_b0602 0757996b2afa32806d40198921976ee7 114 Gene3D G3DSA:2.60.120.10 14 105 5.6E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold TMO_b0602 0757996b2afa32806d40198921976ee7 114 Pfam PF07883 Cupin domain 45 101 6.2E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel TMO_a0019 d2e9c16c65e4682cd3e384f3eea08e0f 76 Pfam PF13586 Transposase DDE domain 9 68 2.7E-15 T 14-10-2018 IPR025668 Transposase DDE domain TMO_b0442 abec71e32f48d23c602161d2318118d0 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 322 3.5E-31 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_a0366 104b331fa70fcf7e80655567116ff70f 545 Pfam PF03787 RAMP superfamily 17 220 6.4E-13 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein TMO_a0366 104b331fa70fcf7e80655567116ff70f 545 Pfam PF03787 RAMP superfamily 326 481 2.1E-4 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein TMO_2680 4f9f1a7eff22f36eb072622a26b5f3e6 551 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 76 213 6.3E-11 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like TMO_1099 2efe29fe47148563327cefdb2a36f95b 180 Pfam PF03748 Flagellar basal body-associated protein FliL 83 180 4.3E-19 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 TMO_3214 51b0546f26bc62572f31be6b3616d2c3 471 Pfam PF04434 SWIM zinc finger 64 84 5.0E-6 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 TMO_c0692 e669b5c0eed62fb745d7b94884c58c57 242 Gene3D G3DSA:1.20.120.520 18 178 4.4E-13 T 14-10-2018 TMO_c0878 f077c6ec87aff581e041297c4af22c14 171 Pfam PF07310 PAS domain 19 155 1.1E-5 T 14-10-2018 IPR009922 Protein of unknown function DUF1457 TMO_0601 a4d386c60acd51f7eb931fe916b760de 392 Pfam PF01435 Peptidase family M48 163 336 1.5E-27 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_0601 a4d386c60acd51f7eb931fe916b760de 392 Gene3D G3DSA:3.30.2010.10 163 247 1.1E-8 T 14-10-2018 TMO_c0038 541f71d3d950652bfaa8f2c1c078bda0 149 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 15 146 9.6E-53 T 14-10-2018 IPR022262 Lipoprotein, putative TMO_1281 dab4c8eb04bed966875866fd4b33024e 294 Pfam PF00950 ABC 3 transport family 13 271 1.1E-43 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TMO_1281 dab4c8eb04bed966875866fd4b33024e 294 SUPERFAMILY SSF81345 13 270 4.97E-18 T 14-10-2018 IPR037294 ABC transporter, BtuC-like TMO_0678 cc8480a56bc8917ef0385dbd6057b2c1 197 Pfam PF09335 SNARE associated Golgi protein 30 160 1.7E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein TMO_0644 0d92b1523f87e053c3f46bf925205800 643 Pfam PF05787 Bacterial protein of unknown function (DUF839) 195 603 2.9E-18 T 14-10-2018 IPR008557 Protein of unknown function DUF839 TMO_b0070 1c119d27ba0604fff12bba86a9346c9f 133 Pfam PF13683 Integrase core domain 2 45 8.9E-7 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TMO_2201 1101398512bbe4331c6bfe8fea3858af 154 Pfam PF11000 Protein of unknown function (DUF2840) 4 151 2.5E-74 T 14-10-2018 IPR021263 Protein of unknown function DUF2840 TMO_1067 59eb4b3196941c6007dcbfb565dc1060 360 SMART SM00267 211 359 0.008 T 14-10-2018 IPR000160 GGDEF domain TMO_c0362 98fe7733cde800a2f7dac0ccb52ec7e1 188 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 45 175 5.8E-28 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_2276 649c1699c511bb8a992d8a88d4e81ea2 144 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 15 140 3.8E-11 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 TMO_d0070 216d03945217f108fef7aca5ebeb0683 378 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 88 348 3.3E-32 T 14-10-2018 IPR017039 Virulence factor BrkB TMO_d0070 216d03945217f108fef7aca5ebeb0683 378 PIRSF PIRSF035875 69 368 1.1E-74 T 14-10-2018 IPR017039 Virulence factor BrkB TMO_d0070 216d03945217f108fef7aca5ebeb0683 378 Pfam PF03631 Virulence factor BrkB 96 350 5.3E-60 T 14-10-2018 IPR017039 Virulence factor BrkB TMO_2466 0a6e2ba3f2f2ef83fee79421dd865864 200 SUPERFAMILY SSF55729 16 172 1.87E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase TMO_2466 0a6e2ba3f2f2ef83fee79421dd865864 200 Gene3D G3DSA:3.40.630.30 13 178 3.4E-7 T 14-10-2018 TMO_3454 3538dc111ce4a9e32db106cd91c111fc 231 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 206 3.6E-22 T 14-10-2018 TMO_c0599 9e9796d02df444bfdea936cc871b9f19 190 Pfam PF05128 Domain of unknown function (DUF697) 11 152 4.2E-14 T 14-10-2018 IPR021147 Protein of unknown function DUF697 TMO_b0594 95c78fb5521720ccc4217bdcd1521750 99 Pfam PF12823 Domain of unknown function (DUF3817) 6 92 2.9E-17 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane TMO_b0594 95c78fb5521720ccc4217bdcd1521750 99 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 8 90 2.3E-20 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane TMO_b0308 020750c0f78fcd5836ed49b1337fa5b5 248 Pfam PF06276 Ferric iron reductase FhuF-like transporter 65 204 6.1E-13 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain TMO_b0308 020750c0f78fcd5836ed49b1337fa5b5 248 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 61 243 2.7E-41 T 14-10-2018 IPR008090 Ferric iron reductase TMO_2094 f9df831f680e7c31ce76488feba25bda 191 Pfam PF05656 Protein of unknown function (DUF805) 77 186 2.0E-26 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 TMO_1201 1e26273f84da11a9291c9ad934b8f0bb 117 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 102 2.1E-5 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 TMO_1201 1e26273f84da11a9291c9ad934b8f0bb 117 SUPERFAMILY SSF69754 7 101 2.09E-8 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like TMO_c0053 6a0743c8cf9dce224e6659b3cb401f3c 249 Pfam PF14348 Domain of unknown function (DUF4400) 51 246 4.3E-74 T 14-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type TMO_c0053 6a0743c8cf9dce224e6659b3cb401f3c 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 249 1.4E-100 T 14-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type TMO_a0113 827b90ffad8d182501626de4a721dbfc 65 Gene3D G3DSA:3.30.2310.20 1 61 5.2E-17 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TMO_a0113 827b90ffad8d182501626de4a721dbfc 65 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 60 4.2E-7 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_2852 8f04c0ec8bb5657025b06959f7c99b06 176 Gene3D G3DSA:3.20.19.10 11 175 3.4E-28 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 TMO_2852 8f04c0ec8bb5657025b06959f7c99b06 176 SUPERFAMILY SSF52016 18 171 1.96E-19 T 14-10-2018 TMO_c0567 6df8325ea290f3eeafbb2f1b3a138e7a 432 Pfam PF10011 Predicted membrane protein (DUF2254) 13 385 2.6E-83 T 14-10-2018 IPR018723 Protein of unknown function DUF2254, membrane TMO_1615 87afb9530f16f931778b000a9c227d4a 337 Gene3D G3DSA:3.90.850.10 71 328 1.2E-48 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_1615 87afb9530f16f931778b000a9c227d4a 337 SUPERFAMILY SSF56529 80 325 1.72E-33 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TMO_1146 a217912eaf0482902c0c13e7899b8a93 352 Pfam PF02653 Branched-chain amino acid transport system / permease component 63 338 3.8E-43 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_0146 3ddbea8a118d37dbd4146bb85743f5f9 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 153 3.2E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_c0738 c610d090814e68afda8650aab1e78bdc 147 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 39 130 2.7E-32 T 14-10-2018 IPR019225 Protein of unknown function DUF2155 TMO_3294 1ae56b2f49642ab2f9767b4c40c9a47f 147 Pfam PF07681 DoxX 13 91 2.9E-16 T 14-10-2018 IPR032808 DoxX family TMO_1343 df8239011ac4b2dab3ceba3129c82f62 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 138 1.7E-15 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 TMO_2478 26c77889632411776706152c3b7a992c 141 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 8 130 1.5E-27 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein TMO_0282 3f55bcee8e91c9101f73dd3b3fbd3c7b 182 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 162 2.9E-17 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_b0004 3cf64faadc3844e568d18e034362b98d 416 Pfam PF06995 Phage P2 GpU 289 408 2.9E-38 T 14-10-2018 IPR009734 Myoviridae, GpU TMO_2377 a8cf452cf65a994b23bc739e2a3979cf 314 Gene3D G3DSA:3.90.1690.10 2 314 1.3E-68 T 14-10-2018 TMO_2590 cce9699cfe3fb3fbac4903483b345416 348 Pfam PF01757 Acyltransferase family 10 319 5.3E-25 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 TMO_0266 5b97d7dc7aa4fa727aa35ab3e6d62709 141 Pfam PF06170 Protein of unknown function (DUF983) 52 134 1.4E-33 T 14-10-2018 IPR009325 Protein of unknown function DUF983 TMO_c0011 b42bb786853263200c5d6655ef73cf1c 256 Pfam PF05275 Copper resistance protein B precursor (CopB) 51 256 1.7E-87 T 14-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 TMO_0810 02d0ecc8712cb2fc84e1258ababc607a 105 Pfam PF02325 YGGT family 17 87 9.6E-8 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 TMO_0342 810b0e6f75b4b79ec98a3e8b12993f20 299 Pfam PF03547 Membrane transport protein 6 139 3.3E-7 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 TMO_0342 810b0e6f75b4b79ec98a3e8b12993f20 299 Pfam PF03547 Membrane transport protein 151 286 1.9E-11 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 TMO_2771 692b6d9af42eb09cbf67f64b819f7fd2 193 PIRSF PIRSF016919 1 193 9.2E-58 T 14-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein TMO_2771 692b6d9af42eb09cbf67f64b819f7fd2 193 Pfam PF04955 HupE / UreJ protein 13 190 1.5E-56 T 14-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein TMO_b0050 1a127d74cc9e66c365f3cf29d0a2e9c6 697 Pfam PF04632 Fusaric acid resistance protein family 34 683 4.5E-174 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 TMO_1500 426c3553028781c26dde5c553e8232ea 426 Pfam PF05559 Protein of unknown function (DUF763) 6 339 9.7E-125 T 14-10-2018 IPR008482 Protein of unknown function DUF763 TMO_0861 248e2d3b72823f903f9d9158c5c5e415 362 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 329 2.1E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_1043 7f4f14c0b5d3b597f3efccee1d91ac91 366 Pfam PF00248 Aldo/keto reductase family 18 335 5.7E-63 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain TMO_1043 7f4f14c0b5d3b597f3efccee1d91ac91 366 SUPERFAMILY SSF51430 6 335 1.83E-87 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_1043 7f4f14c0b5d3b597f3efccee1d91ac91 366 Gene3D G3DSA:3.20.20.100 3 354 8.7E-104 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TMO_1986 47ad7148eb765c85d1a48bed7100674c 347 Pfam PF01757 Acyltransferase family 11 328 2.7E-24 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 TMO_0362 d0292e3f21adff9c39f24b988fdcd3cb 135 Pfam PF03788 LrgA family 29 122 2.7E-23 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 TMO_1931 9084c7eea3da834530588964ad3e0851 484 Pfam PF04293 SpoVR like protein 5 420 1.0E-142 T 14-10-2018 IPR007390 Sporulation stage V, protein R TMO_a0276 3a8bce4502bc451d7d0309d622dd131e 135 Pfam PF03788 LrgA family 23 115 1.1E-9 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 TMO_2732 1456ec5ee5d7a3c0de21f4e615510eda 516 SUPERFAMILY SSF51556 36 492 2.59E-40 T 14-10-2018 IPR032466 Metal-dependent hydrolase TMO_2732 1456ec5ee5d7a3c0de21f4e615510eda 516 Pfam PF04909 Amidohydrolase 141 334 4.5E-11 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TMO_a0350 577cb714c0b0a34269440744d1cbc116 96 Pfam PF00872 Transposase, Mutator family 1 67 3.0E-23 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TMO_1934 2f5f59a7ea96fce7cb1c70de77bbea81 66 Pfam PF04102 SlyX 1 59 1.4E-11 T 14-10-2018 IPR007236 SlyX TMO_1605 f15a0ff811b62c3f1e5ceb0940296827 525 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 291 3.9E-50 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_1605 f15a0ff811b62c3f1e5ceb0940296827 525 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 306 514 4.3E-36 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_0058 2fb81f42cb7848a175abd6f7b1fa936a 368 Pfam PF13362 Toprim domain 270 357 1.9E-10 T 14-10-2018 IPR006171 TOPRIM domain TMO_3423 2912e83d197d8d380527ba3a4635d699 182 Pfam PF12100 Domain of unknown function (DUF3576) 76 177 1.4E-44 T 14-10-2018 IPR021959 Protein of unknown function DUF3576 TMO_a0151 8fcea7f0b558f8897549d6c59bfb9a3a 2063 SUPERFAMILY SSF52540 256 490 5.44E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_1105 c6f1862961e2ea79c3c71f072fece694 220 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 23 56 3.5E-6 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain TMO_1328 17fa478dae936f6633d035414a9a1dda 213 Pfam PF01810 LysE type translocator 16 208 1.5E-16 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TMO_1521 f3acad933900f5095ea88ce90a22c69c 83 Pfam PF13488 Glycine zipper 37 76 5.7E-6 T 14-10-2018 IPR039567 Glycine zipper domain TMO_c0920 4d2af64e2e79d9631849eb8b90923f2b 194 Pfam PF05751 FixH 22 156 4.6E-19 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH TMO_0409 71be0b9d253c8e1395bdb13bd820bf5e 96 Pfam PF13670 Peptidase propeptide and YPEB domain 11 94 2.5E-30 T 14-10-2018 IPR025711 PepSY domain TMO_2009 47a3c9fa7fff8a67671c2b28be523fa0 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 321 1.7E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_c0049 304cfda90b256d31a4077304fa87f839 166 SUPERFAMILY SSF56019 6 164 1.57E-27 T 14-10-2018 IPR036570 HORMA domain superfamily TMO_2671 7f2036b10e1bb0b511d01ec4b4e7289b 520 Gene3D G3DSA:3.30.420.10 292 512 5.6E-32 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TMO_2671 7f2036b10e1bb0b511d01ec4b4e7289b 520 SUPERFAMILY SSF53098 12 520 7.84E-61 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily TMO_2659 a837618efc113a5eab594eba4f8daf2b 255 Pfam PF07103 Protein of unknown function (DUF1365) 9 247 9.2E-64 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 TMO_0594 7dc9aafb585db21bbfbfa309ae549c6b 111 Gene3D G3DSA:1.10.1200.10 5 97 6.1E-6 T 14-10-2018 IPR036736 ACP-like superfamily TMO_2206 b3658b6e16c982c8afb1ed026c3e1865 119 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 12 110 7.2E-26 T 14-10-2018 IPR018754 Protein of unknown function DUF2285 TMO_2056 3a118d11f114a044f149dc024c9c185a 305 Gene3D G3DSA:1.10.530.10 150 293 1.4E-13 T 14-10-2018 TMO_2056 3a118d11f114a044f149dc024c9c185a 305 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 172 246 5.5E-13 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TMO_0987 5689b6068e4eb28af422e6b362ef99b3 158 Pfam PF16998 17 kDa outer membrane surface antigen 71 157 7.5E-13 T 14-10-2018 IPR032635 Surface antigen domain TMO_0987 5689b6068e4eb28af422e6b362ef99b3 158 PIRSF PIRSF002721 2 157 4.8E-48 T 14-10-2018 IPR016364 Surface antigen, Rickettsia type TMO_0987 5689b6068e4eb28af422e6b362ef99b3 158 Pfam PF05433 Glycine zipper 2TM domain 29 70 7.9E-10 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 TMO_b0360 1efd8f081ca8c2efb98270a5bea4d3ee 607 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 8 351 3.3E-120 T 14-10-2018 IPR010839 Acyclic terpene utilisation TMO_1529 0e0336507c59aefbc4b8c43f12a49bb9 550 Pfam PF02690 Na+/Pi-cotransporter 140 252 6.6E-9 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TMO_1529 0e0336507c59aefbc4b8c43f12a49bb9 550 Pfam PF02690 Na+/Pi-cotransporter 14 149 1.4E-22 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TMO_a0427 5e18c317192de35b1b40b16cafeb24d8 343 SUPERFAMILY SSF52266 96 337 1.83E-13 T 14-10-2018 TMO_c0931 b025c522d98fe1abeb82c49ba729f9be 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 299 1.1E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_0138 7890190643cf8c4687f3a5118b7a9829 335 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 24 325 1.5E-68 T 14-10-2018 IPR018666 Protein of unknown function DUF2125 TMO_c0661 bf7db74e6bec7beea5f7a814a8d3e8d9 188 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 39 167 1.3E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_2218 df62bb9151a3ef7de679e993aaac2ae6 312 Pfam PF10686 Protein of unknown function (DUF2493) 194 260 5.2E-30 T 14-10-2018 IPR019627 Mycobacteriophage D29, Gp61 TMO_a0477 6e1624ca1406d2805e33ff906e0c016f 479 SUPERFAMILY SSF56281 64 297 8.65E-8 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_a0477 6e1624ca1406d2805e33ff906e0c016f 479 Gene3D G3DSA:3.60.15.10 32 307 4.3E-19 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TMO_1721 964f4c7aaeee9a9acdaf794821bc9dd1 128 Pfam PF04977 Septum formation initiator 13 87 1.9E-14 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC TMO_0602 655bf3a5d992a24802d87676f23923d0 378 Pfam PF05987 Bacterial protein of unknown function (DUF898) 16 223 2.0E-56 T 14-10-2018 IPR010295 Protein of unknown function DUF898 TMO_0602 655bf3a5d992a24802d87676f23923d0 378 Pfam PF05987 Bacterial protein of unknown function (DUF898) 206 368 3.1E-7 T 14-10-2018 IPR010295 Protein of unknown function DUF898 TMO_0586 baba632ea8a20c81920addbc09a6e4d7 279 Pfam PF09361 Phasin protein 170 265 9.1E-12 T 14-10-2018 IPR018968 Phasin TMO_3216 92f73680cfaf821e604dd061445f5094 88 Pfam PF06620 Protein of unknown function (DUF1150) 52 88 9.9E-7 T 14-10-2018 IPR009531 Protein of unknown function DUF1150 TMO_0117 5e6bc4afcc93df50ea6d50f8c1c68c27 168 Pfam PF04463 Protein of unknown function (DUF523) 15 151 6.8E-41 T 14-10-2018 IPR007553 Domain of unknown function DUF523 TMO_0708 21f7633e17b8b844082ef1f8a0a71226 227 Pfam PF02397 Bacterial sugar transferase 30 220 4.3E-61 T 14-10-2018 IPR003362 Bacterial sugar transferase TMO_0786 1cfafe9f3741e0831e94619b1f2c5636 408 Pfam PF03600 Citrate transporter 26 351 6.5E-27 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 TMO_1244 ecd7baab1feb206df7463cc5f4224a32 235 Pfam PF02108 Flagellar assembly protein FliH 88 195 5.9E-6 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE TMO_2545 2413085b5667057b5d00088f51085f57 270 Pfam PF01061 ABC-2 type transporter 30 229 2.4E-14 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TMO_0243 1414974efc73e83cc1809222fd990716 190 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 21 151 4.6E-30 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_1309 97070f729caccba378047afc65997b12 71 Pfam PF08898 Domain of unknown function (DUF1843) 20 71 3.9E-22 T 14-10-2018 IPR014994 Domain of unknown function DUF1843 TMO_b0423 b5ac2730f58655471b48a21afc4472d6 205 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 51 197 2.4E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_1305 3a29796667a3dc1192abd3f2e48be6e4 113 Pfam PF11804 Protein of unknown function (DUF3325) 10 108 1.1E-26 T 14-10-2018 IPR021762 Protein of unknown function DUF3325 TMO_d0056 340d5442eae825b35603e9b588c89c23 112 Pfam PF06127 Protein of unknown function (DUF962) 9 100 3.7E-35 T 14-10-2018 IPR009305 Protein of unknown function DUF962 TMO_b0202 00be13efa38ab6efbcca3ecda1fb73b0 244 Pfam PF01925 Sulfite exporter TauE/SafE 13 235 2.5E-13 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_c0305 a672d484ae57db8e5b0b2ab7cbd8032f 89 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 14 88 1.9E-10 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 TMO_c0532 61b5b029c7176ee1e084fc2a75b163e8 201 Pfam PF06210 Protein of unknown function (DUF1003) 70 172 1.4E-38 T 14-10-2018 IPR010406 Protein of unknown function DUF1003 TMO_a0256 b0f11080bcec1e36ea71f55c40779f0c 401 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 391 1.6E-45 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_1622 c72f5773a4625f50c632bd4f8d3c0382 261 Pfam PF04367 Protein of unknown function (DUF502) 105 210 1.9E-37 T 14-10-2018 IPR007462 Protein of unknown function DUF502 TMO_2700 49555d5fcdaa192363944fc931568aee 489 Pfam PF03929 PepSY-associated TM region 22 372 6.6E-45 T 14-10-2018 IPR005625 PepSY-associated TM protein TMO_0367 e595cda27cc04d0f4ec1f2b0190607ac 510 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 19 439 9.5E-141 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane TMO_c0910 9f303fb2c759112aadfcf3b70abca92e 215 Pfam PF03458 UPF0126 domain 99 172 1.0E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 TMO_c0910 9f303fb2c759112aadfcf3b70abca92e 215 Pfam PF03458 UPF0126 domain 13 85 4.6E-14 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 TMO_1203 3d6d93c5ca719cbbc21ff884d291ac8a 164 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 33 155 2.7E-15 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_3196 b5a68f8429f20d5563a98d0f24c3e1ac 878 Pfam PF02687 FtsX-like permease family 784 866 4.5E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TMO_1405 6ece9a6a366c2314fb97c5b9b78ecbf9 171 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 157 3.2E-30 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TMO_0305 1977706d09aaaf7abadaccf23ebf3533 171 Pfam PF06889 Protein of unknown function (DUF1266) 71 163 1.6E-25 T 14-10-2018 IPR009677 Protein of unknown function DUF1266 TMO_a0295 4d4ae015f829f61624f2ecad777bf302 305 Pfam PF02653 Branched-chain amino acid transport system / permease component 22 289 1.8E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_a0228 6b1d071faa8f3db90374191fc94adf97 285 Pfam PF02653 Branched-chain amino acid transport system / permease component 4 269 1.4E-44 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TMO_2325 722eed471545d8b1f8d65fbd813146bb 461 Pfam PF13264 Domain of unknown function (DUF4055) 259 397 2.5E-40 T 14-10-2018 IPR025129 Domain of unknown function DUF4055 TMO_2692 462b32cccbe3cfc4c5cd1d8f820adb77 178 Pfam PF14091 Domain of unknown function (DUF4269) 11 158 1.7E-46 T 14-10-2018 IPR025365 Protein of unknown function DUF4269 TMO_1886 5637cea26e19e8969aeb5a555dba602f 241 Pfam PF09976 Tetratricopeptide repeat-like domain 22 190 5.0E-14 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 TMO_1215 a7b35b558fc2bf0cd1c18486b16b2141 273 Pfam PF02698 DUF218 domain 85 249 7.1E-23 T 14-10-2018 IPR003848 Domain of unknown function DUF218